Psyllid ID: psy2103

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200---
Protein Sequence
MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQSGYPYHKLQSWRLSSEYRLDALCSINTIKLCRKENQSVTRPC
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHcccccccHHHHccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHccccccccccccccccccccEccccHHHHHccccccccccccccccEccccHHHHHHHHcccccccccccccccccEccccHHHHHHHHccccccccccccccccHHHHHHHHHHccccccccccHcccccc
Coil and Loop (DISEMBL)
mlfsqsphlknherihsgerpyqcevcEKTFARHSTLWNhrrihtgekpyrcsicgsafnQATHLknhakvgkckvhtgekphhcdicdvgfsdkfALKRHRLIHEKyarnstvnqshdsqttppqstpthsssqleeWKCESSRLIFEAWAKLQKELLsqsgypyhklqswrlsSEYRLDALCSINTIKLcrkenqsvtrpc
Flexible Loop (DISEMBL)
mlfsqsphlknherihsgerpyQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYarnstvnqshdsqttppqstpthsssqLEEWKCESSRLIFEAWAKLQKELLSQSGYPYHKLQSWRLSSEYRLDALCSIntiklcrkenqsvtrpc
Low Complexity Region (SEG)
MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNqshdsqttppqstpthsssqLEEWKCESSRLIFEAWAKLQKELLSQSGYPYHKLQSWRLSSEYRLDALCSINTIKLCRKENQSVTRPC
Disordered region (IsUnstruct)
********************PYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKY******************************WKCESSRLIFEAWAKLQKELLSQSGYPYHKLQSWRLSSEYRLDALCSINTIKLCR**********
Disordered Region (DISOPRED)
MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQSGYPYHKLQSWRLSSEYRLDALCSINTIKLCRKENQ******
Disordered Region (DISEMBL)
MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARN*****************************CESSRLIFEAWAKLQKELLSQSGYPYHKLQSWRLSSEYRLDALCSINTIKLCRK*********
Disordered Region (DISPRO)
MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQSGYPYHKLQSWRLSSEYRLDALCSINTIKLCRKENQSVT*PC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQSGYPYHKLQSWRLSSEYRLDALCSINTIKLCRKENQSVTRPC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	203	2.2.26 [Sep-21-2011]
P10073	491	Zinc finger and SCAN doma	yes	N/A	0.482	0.199	0.533	4e-26
A1YF12	682	Zinc finger protein 16 OS	N/A	N/A	0.482	0.143	0.524	5e-26
P17020	682	Zinc finger protein 16 OS	no	N/A	0.482	0.143	0.514	7e-26
A1YG88	673	Zinc finger protein 16 OS	N/A	N/A	0.482	0.145	0.514	8e-26
A2T759	682	Zinc finger protein 16 OS	no	N/A	0.482	0.143	0.504	3e-25
A6NK21	547	Putative zinc finger prot	no	N/A	0.798	0.296	0.385	7e-25
Q9UJU3	913	Zinc finger protein 112 O	no	N/A	0.482	0.107	0.495	1e-24
A6NK53	670	Zinc finger protein 233 O	no	N/A	0.482	0.146	0.485	1e-24
Q5TYW1	1059	Zinc finger protein 658 O	no	N/A	0.482	0.092	0.524	2e-24
Q12901	538	Zinc finger protein 155 O	no	N/A	0.778	0.293	0.386	2e-24

>sp|P10073|ZSC22_HUMAN Zinc finger and SCAN domain-containing protein 22 OS=Homo sapiens GN=ZSCAN22 PE=2 SV=2

 Score =  117 bits (294), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 70/103 (67%), Gaps = 5/103 (4%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           FS+  HL  H+RIH+GE+PY+C  C KTF+R + L  H+R+HTGE+PY C  CG AF+Q+
Sbjct: 333 FSRVTHLTQHQRIHTGEKPYKCGECGKTFSRSTHLTQHQRVHTGERPYECDACGKAFSQS 392

Query: 63  THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           THL  H      ++HTGEKP+ CD C   FSD  AL RH  IH
Sbjct: 393 THLTQHQ-----RIHTGEKPYKCDACGRAFSDCSALIRHLRIH 430

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|A1YF12|ZNF16_GORGO Zinc finger protein 16 OS=Gorilla gorilla gorilla GN=ZNF16 PE=3 SV=1

 Score =  117 bits (293), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 73/103 (70%), Gaps = 5/103 (4%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           FSQS HL+ H+R+H+GE+PY+C  C K F+R S L  H R+HTGEKPY+CS CG AF+Q+
Sbjct: 386 FSQSAHLRKHQRVHTGEKPYECNDCGKPFSRVSNLIKHHRVHTGEKPYKCSDCGKAFSQS 445

Query: 63  THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           + L  H      ++HTGEKPH C+IC   FS    L++H++IH
Sbjct: 446 SSLIQHR-----RIHTGEKPHVCNICGKAFSYSSVLRKHQIIH 483

May be involved in transcriptional regulation.

Gorilla gorilla gorilla (taxid: 9595)

>sp|P17020|ZNF16_HUMAN Zinc finger protein 16 OS=Homo sapiens GN=ZNF16 PE=1 SV=3

 Score =  117 bits (292), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 53/103 (51%), Positives = 73/103 (70%), Gaps = 5/103 (4%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           FSQS HL+ H+R+H+GE+PY+C  C K F+R S L  H R+HTGEKPY+CS CG AF+Q+
Sbjct: 386 FSQSAHLRKHQRVHTGEKPYECNDCGKPFSRVSNLIKHHRVHTGEKPYKCSDCGKAFSQS 445

Query: 63  THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           + L  H      ++HTGEKPH C++C   FS    L++H++IH
Sbjct: 446 SSLIQHR-----RIHTGEKPHVCNVCGKAFSYSSVLRKHQIIH 483

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A1YG88|ZNF16_PANPA Zinc finger protein 16 OS=Pan paniscus GN=ZNF16 PE=3 SV=1

 Score =  116 bits (291), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 53/103 (51%), Positives = 73/103 (70%), Gaps = 5/103 (4%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           FSQS HL+ H+R+H+GE+PY+C  C K F+R S L  H R+HTGEKPY+CS CG AF+Q+
Sbjct: 377 FSQSAHLRKHQRVHTGEKPYECNDCGKPFSRVSNLIKHHRVHTGEKPYKCSDCGKAFSQS 436

Query: 63  THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           + L  H      ++HTGEKPH C++C   FS    L++H++IH
Sbjct: 437 SSLIQHR-----RIHTGEKPHVCNVCGKAFSYSSVLRKHQIIH 474

May be involved in transcriptional regulation.

Pan paniscus (taxid: 9597)

>sp|A2T759|ZNF16_PANTR Zinc finger protein 16 OS=Pan troglodytes GN=ZNF16 PE=3 SV=1

 Score =  114 bits (286), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 52/103 (50%), Positives = 72/103 (69%), Gaps = 5/103 (4%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           FSQS HL+ H+R+H+GE+PY+C  C K F+R S L  H R+HTGEKPY+CS CG  F+Q+
Sbjct: 386 FSQSAHLRKHQRVHTGEKPYECNDCGKPFSRVSNLIKHHRVHTGEKPYKCSDCGKXFSQS 445

Query: 63  THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           + L  H      ++HTGEKPH C++C   FS    L++H++IH
Sbjct: 446 SSLIQHR-----RIHTGEKPHVCNVCGKAFSYSSVLRKHQIIH 483

May be involved in transcriptional regulation.

Pan troglodytes (taxid: 9598)

>sp|A6NK21|YI017_HUMAN Putative zinc finger protein LOC730110 OS=Homo sapiens PE=5 SV=3

 Score =  113 bits (283), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 96/171 (56%), Gaps = 9/171 (5%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           F QS  L  H+RIHSGE+ Y+CEVC K F+R S L  H+RIHTGEKPY+C  CG AFN +
Sbjct: 352 FKQSSTLTTHKRIHSGEKFYKCEVCSKAFSRFSHLTTHKRIHTGEKPYKCEECGKAFNLS 411

Query: 63  THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH--EKYARNSTVNQSHDS 120
           +HL  H K+    +HTGEKP+ C+ C   F+    L +H++IH  EK  +     ++ + 
Sbjct: 412 SHLTTH-KI----IHTGEKPYKCEECGKAFNQSSTLSKHKVIHTGEKPYKCGECGKAFNQ 466

Query: 121 QTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQSGYPYHKLQS 171
            +        H+  +   +KCE     F   + L +  +  +G   +KL+S
Sbjct: 467 SSHLTTHKIIHTGEK--PYKCEECGKAFNNSSILNRHKMIHTGEKLYKLES 515

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9UJU3|ZN112_HUMAN Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=2 SV=2

 Score =  112 bits (281), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 51/103 (49%), Positives = 74/103 (71%), Gaps = 5/103 (4%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           FS+S +L+ H+R+H+GE+PY+CE C K F+R+S L  H+R+HTGEKPY+C  CG  F+++
Sbjct: 562 FSRSSYLQAHQRVHTGEKPYKCEECGKGFSRNSYLQGHQRVHTGEKPYKCEECGKGFSRS 621

Query: 63  THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           +HL+ H      +VHTGEKP  C+ C  GFS  F L+ H+ +H
Sbjct: 622 SHLQGHQ-----RVHTGEKPFKCEECGKGFSWSFNLQIHQRVH 659

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A6NK53|ZN233_HUMAN Zinc finger protein 233 OS=Homo sapiens GN=ZNF233 PE=2 SV=3

 Score =  112 bits (281), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 74/103 (71%), Gaps = 5/103 (4%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           FS++ +L+ H+RIH+GE+PY+C+VC+K F+R+S L  H+R+HTGEKPY+C  CG  F+Q 
Sbjct: 461 FSKASNLQAHQRIHTGEKPYKCDVCDKNFSRNSHLQAHQRVHTGEKPYKCDTCGKDFSQI 520

Query: 63  THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           +HL+ H      +VH GEKP+ C+ C  GFS    L+ H+ +H
Sbjct: 521 SHLQAHQ-----RVHKGEKPYKCETCGKGFSQSSHLQDHQQVH 558

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5TYW1|ZN658_HUMAN Zinc finger protein 658 OS=Homo sapiens GN=ZNF658 PE=2 SV=2

 Score =  112 bits (279), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 68/103 (66%), Gaps = 5/103 (4%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           FSQ  +L  HERIH+GE+PY+C VC KTF   + L  H+RIHTGEKPY C+ CG  F+Q 
Sbjct: 779 FSQKSYLSGHERIHTGEKPYECNVCGKTFVYKAALIVHQRIHTGEKPYECNQCGKTFSQR 838

Query: 63  THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           THL  H      ++HTGEKP+ C+ C   F+D  AL+ H  IH
Sbjct: 839 THLCAHQ-----RIHTGEKPYECNECGKTFADNSALRAHHRIH 876

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q12901|ZN155_HUMAN Zinc finger protein 155 OS=Homo sapiens GN=ZNF155 PE=2 SV=4

 Score =  112 bits (279), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 93/168 (55%), Gaps = 10/168 (5%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           FSQS HL+ H+R+H+GE+P++CE C K F+R S L  HR++HTGEKPY C  CG AF   
Sbjct: 213 FSQSSHLQTHQRVHTGEKPFKCEQCGKGFSRRSALNVHRKLHTGEKPYICEACGKAFIHD 272

Query: 63  THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH--EKYARNSTVNQSHDS 120
           + LK H      ++HTGEKP  CDIC   F  +  LK H ++H  EK  R  T ++S   
Sbjct: 273 SQLKEHK-----RIHTGEKPFKCDICGKTFYFRSRLKSHSMVHTGEKPFRCDTCDKSFHQ 327

Query: 121 QTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQSG-YPYH 167
           ++   +    H+  +   ++CE     F       K  +  +G  PY+
Sbjct: 328 RSALNRHCMVHTGEK--PYRCEQCGKGFIGRLDFYKHQVVHTGEKPYN 373

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
328696522	515	PREDICTED: zinc finger protein 227-like	0.655	0.258	0.755	7e-54
383851770	613	PREDICTED: zinc finger protein 347-like	0.541	0.179	0.847	2e-52
345491134	429	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.581	0.275	0.811	3e-52
328777013	563	PREDICTED: zinc finger protein 347-like	0.541	0.195	0.847	4e-52
340726215	564	PREDICTED: zinc finger protein 347-like	0.527	0.189	0.857	9e-52
350405335	576	PREDICTED: zinc finger protein 347-like	0.527	0.185	0.857	1e-51
307187347	565	Zinc finger protein LOC730087 [Camponotu	0.517	0.185	0.872	2e-51
332018462	589	Zinc finger protein 665 [Acromyrmex echi	0.517	0.178	0.872	2e-51
322789857	548	hypothetical protein SINV_12076 [Solenop	0.527	0.195	0.857	2e-51
91085019	549	PREDICTED: similar to zinc finger protei	0.517	0.191	0.845	9e-49

>gi|328696522|ref|XP_003240052.1| PREDICTED: zinc finger protein 227-like [Acyrthosiphon pisum]

 Score =  215 bits (548), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 105/139 (75%), Positives = 112/139 (80%), Gaps = 6/139 (4%)

Query: 1   MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
           M FSQSPHLKNHERIHSGERPYQCEVC+KTFARHSTLWNHRRIHTGEKPYRC ICGSAFN
Sbjct: 334 MQFSQSPHLKNHERIHSGERPYQCEVCDKTFARHSTLWNHRRIHTGEKPYRCDICGSAFN 393

Query: 61  QATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDS 120
           QATHLKNHA     KVHTGEKPH CDIC VGFSD+FALKRHR IHEKYAR  +   +  +
Sbjct: 394 QATHLKNHA-----KVHTGEKPHRCDICGVGFSDRFALKRHRNIHEKYARQQSDAAAAHT 448

Query: 121 QTTPPQST-PTHSSSQLEE 138
            T P Q   P    +Q+EE
Sbjct: 449 VTPPSQELEPISGQTQIEE 467

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383851770|ref|XP_003701404.1| PREDICTED: zinc finger protein 347-like [Megachile rotundata]

 Score =  210 bits (535), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 100/118 (84%), Positives = 104/118 (88%), Gaps = 8/118 (6%)

Query: 1   MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
           M FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC+ICGSAFN
Sbjct: 433 MQFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCNICGSAFN 492

Query: 61  QATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKY---ARNSTVN 115
           QATHLKNHAKV     HTGEKPH CDIC++GFSD+FALKRHR IHEKY   ARN   N
Sbjct: 493 QATHLKNHAKV-----HTGEKPHRCDICEIGFSDRFALKRHRAIHEKYGQTARNQNAN 545

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345491134|ref|XP_001607184.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 616-like [Nasonia vitripennis]

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 103/127 (81%), Positives = 108/127 (85%), Gaps = 9/127 (7%)

Query: 1   MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
           M FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC+ICGSAFN
Sbjct: 264 MQFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCNICGSAFN 323

Query: 61  QATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKY----ARNSTVNQ 116
           QATHLKNHA     KVHTGEKPH CDIC++GFSD+FALKRHR IHEKY    ARNS  N 
Sbjct: 324 QATHLKNHA-----KVHTGEKPHRCDICEIGFSDRFALKRHRAIHEKYGQTAARNSQANA 378

Query: 117 SHDSQTT 123
           S+    T
Sbjct: 379 SNVQANT 385

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328777013|ref|XP_393077.4| PREDICTED: zinc finger protein 347-like [Apis mellifera] gi|380024663|ref|XP_003696112.1| PREDICTED: zinc finger protein 347-like [Apis florea]

 Score =  209 bits (533), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 100/118 (84%), Positives = 104/118 (88%), Gaps = 8/118 (6%)

Query: 1   MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
           M FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC+ICGSAFN
Sbjct: 384 MQFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCNICGSAFN 443

Query: 61  QATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKY---ARNSTVN 115
           QATHLKNHAKV     HTGEKPH CDIC++GFSD+FALKRHR IHEKY   ARN   N
Sbjct: 444 QATHLKNHAKV-----HTGEKPHRCDICEIGFSDRFALKRHRAIHEKYGQTARNQNAN 496

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340726215|ref|XP_003401456.1| PREDICTED: zinc finger protein 347-like [Bombus terrestris]

 Score =  208 bits (530), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 96/112 (85%), Positives = 102/112 (91%), Gaps = 5/112 (4%)

Query: 1   MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
           M FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC+ICGSAFN
Sbjct: 384 MQFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCNICGSAFN 443

Query: 61  QATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNS 112
           QATHLKNHAKV     HTGEKPH CDIC++GFSD+FALKRHR IHEKY + +
Sbjct: 444 QATHLKNHAKV-----HTGEKPHRCDICEIGFSDRFALKRHRAIHEKYGQTA 490

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350405335|ref|XP_003487403.1| PREDICTED: zinc finger protein 347-like [Bombus impatiens]

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 96/112 (85%), Positives = 102/112 (91%), Gaps = 5/112 (4%)

Query: 1   MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
           M FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC+ICGSAFN
Sbjct: 396 MQFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCNICGSAFN 455

Query: 61  QATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNS 112
           QATHLKNHAKV     HTGEKPH CDIC++GFSD+FALKRHR IHEKY + +
Sbjct: 456 QATHLKNHAKV-----HTGEKPHRCDICEIGFSDRFALKRHRAIHEKYGQTA 502

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307187347|gb|EFN72475.1| Zinc finger protein LOC730087 [Camponotus floridanus]

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 96/110 (87%), Positives = 101/110 (91%), Gaps = 5/110 (4%)

Query: 1   MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
           M FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC+ICGSAFN
Sbjct: 388 MQFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCNICGSAFN 447

Query: 61  QATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYAR 110
           QATHLKNHA     KVHTGEKPH CDIC++GFSD+FALKRHR IHEKY +
Sbjct: 448 QATHLKNHA-----KVHTGEKPHRCDICEIGFSDRFALKRHRAIHEKYGQ 492

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018462|gb|EGI59052.1| Zinc finger protein 665 [Acromyrmex echinatior]

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 96/110 (87%), Positives = 101/110 (91%), Gaps = 5/110 (4%)

Query: 1   MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
           M FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC+ICGSAFN
Sbjct: 412 MQFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCNICGSAFN 471

Query: 61  QATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYAR 110
           QATHLKNHA     KVHTGEKPH CDIC++GFSD+FALKRHR IHEKY +
Sbjct: 472 QATHLKNHA-----KVHTGEKPHRCDICEIGFSDRFALKRHRAIHEKYGQ 516

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322789857|gb|EFZ15004.1| hypothetical protein SINV_12076 [Solenopsis invicta]

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 96/112 (85%), Positives = 102/112 (91%), Gaps = 5/112 (4%)

Query: 1   MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
           M FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC+ICGSAFN
Sbjct: 371 MQFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCNICGSAFN 430

Query: 61  QATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNS 112
           QATHLKNHA     KVHTGEKPH CDIC++GFSD+FALKRHR IHEKY + +
Sbjct: 431 QATHLKNHA-----KVHTGEKPHRCDICEIGFSDRFALKRHRAIHEKYGQTA 477

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91085019|ref|XP_973601.1| PREDICTED: similar to zinc finger protein [Tribolium castaneum]

 Score =  198 bits (504), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 93/110 (84%), Positives = 96/110 (87%), Gaps = 5/110 (4%)

Query: 1   MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
           M FSQSPHLKNHERIHSGERPY CEVCEK+FARHSTLWNHRRIHTGEKPYRC ICGS FN
Sbjct: 370 MQFSQSPHLKNHERIHSGERPYVCEVCEKSFARHSTLWNHRRIHTGEKPYRCDICGSCFN 429

Query: 61  QATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYAR 110
           QATHLKNHA     KVH+GEKP  CDIC VGFSD+FALKRHR IHEKY R
Sbjct: 430 QATHLKNHA-----KVHSGEKPFKCDICSVGFSDRFALKRHRNIHEKYGR 474

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
FB|FBgn0032979	566	CG1832 [Drosophila melanogaste	0.527	0.189	0.723	6.4e-44
RGD|2322471	495	Zscan22 "zinc finger and SCAN	0.482	0.197	0.524	2.2e-28
UNIPROTKB|J9P5A4	491	ZSCAN22 "Uncharacterized prote	0.482	0.199	0.543	5.9e-28
UNIPROTKB|F1M576	354	F1M576 "Uncharacterized protei	0.482	0.276	0.504	8.2e-28
UNIPROTKB|F1P9J6	633	ZNF16 "Uncharacterized protein	0.482	0.154	0.524	8.9e-28
UNIPROTKB|P10073	491	ZSCAN22 "Zinc finger and SCAN	0.482	0.199	0.533	2.2e-27
UNIPROTKB|P17020	682	ZNF16 "Zinc finger protein 16"	0.482	0.143	0.514	3e-27
UNIPROTKB|F1MJD3	638	ZNF16 "Uncharacterized protein	0.482	0.153	0.514	5.3e-27
UNIPROTKB|A6NK21	547	A6NK21 "Putative zinc finger p	0.807	0.299	0.372	8.4e-27
UNIPROTKB|Q9UII5	783	ZNF107 "Zinc finger protein 10	0.802	0.208	0.327	3.1e-26

FB|FBgn0032979 CG1832 [Drosophila melanogaster (taxid:7227)]

 Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
 Identities = 81/112 (72%), Positives = 93/112 (83%)

Query:     1 MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
             M FSQSPHLKNHER HSGERPY C VC+K FARH+TLWNHRRIHTGEKPY+C ICGSAF+
Sbjct:   428 MQFSQSPHLKNHERTHSGERPYVCGVCDKGFARHATLWNHRRIHTGEKPYKCEICGSAFS 487

Query:    61 QATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNS 112
             QA HLKNHAKV     H+GEKP+ C+IC   F+D+FALKRHR IH+KY + +
Sbjct:   488 QAAHLKNHAKV-----HSGEKPYKCEICSAAFADRFALKRHRGIHQKYGQTA 534

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

RGD|2322471 Zscan22 "zinc finger and SCAN domain containing 22" [Rattus norvegicus (taxid:10116)]

 Score = 319 (117.4 bits), Expect = 2.2e-28, P = 2.2e-28
 Identities = 54/103 (52%), Positives = 72/103 (69%)

Query:     3 FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
             FS+  HL  H+RIH+GE+PY+CE C KTF+R + L  H+R+HTGE+PY C  CG AF+Q+
Sbjct:   334 FSRVAHLTQHQRIHTGEKPYKCEECGKTFSRSTHLTQHQRVHTGERPYECDTCGKAFSQS 393

Query:    63 THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
             THL  H ++     HTGEKP+ C++C   FSD  AL RH  +H
Sbjct:   394 THLTQHQRI-----HTGEKPYRCEVCGKAFSDCSALVRHLRVH 431

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

UNIPROTKB|J9P5A4 ZSCAN22 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 315 (115.9 bits), Expect = 5.9e-28, P = 5.9e-28
 Identities = 56/103 (54%), Positives = 71/103 (68%)

Query:     3 FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
             FS+  HL  H+RIH+GE+PY+CE C KTF+R + L  H+R+HTGE+PY C  CG AF+Q+
Sbjct:   333 FSRVTHLTQHQRIHTGEKPYKCEECGKTFSRSTHLTQHQRVHTGERPYECDECGKAFSQS 392

Query:    63 THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
             THL  H ++     HTGEKP+ CD C   FSD  AL RH  IH
Sbjct:   393 THLTQHQRI-----HTGEKPYKCDACGRAFSDCSALIRHLRIH 430

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1M576 F1M576 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 52/103 (50%), Positives = 73/103 (70%)

Query:     3 FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
             FSQ   L  H+RIH+GE+PY+C  C+K FA HS+LW H+R+HTGEKPY+C+ C  AF++ 
Sbjct:   255 FSQPSILYRHKRIHTGEKPYKCNECDKAFADHSSLWKHKRVHTGEKPYKCNECDKAFSEH 314

Query:    63 THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
             ++L+ H +V     HTGEKP+ C  CD  FSD  +L+ H+ +H
Sbjct:   315 SNLQTHKRV-----HTGEKPYKCKECDKAFSDHSSLRTHKRVH 352

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1P9J6 ZNF16 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 318 (117.0 bits), Expect = 8.9e-28, P = 8.9e-28
 Identities = 54/103 (52%), Positives = 73/103 (70%)

Query:     3 FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
             FSQS HL+ H+R+H+GERPY+C  C K F+R S L  H R+HTGEKPY+CS CG AF+Q+
Sbjct:   337 FSQSSHLRKHQRVHTGERPYECNECGKPFSRVSNLIKHHRVHTGEKPYKCSDCGKAFSQS 396

Query:    63 THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
             + L  H ++     HTGEKPH C++C   FS    L++H++IH
Sbjct:   397 SSLIQHRRI-----HTGEKPHVCNVCGKAFSYSSVLRKHQIIH 434

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|P10073 ZSCAN22 "Zinc finger and SCAN domain-containing protein 22" [Homo sapiens (taxid:9606)]

 Score = 310 (114.2 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 55/103 (53%), Positives = 70/103 (67%)

Query:     3 FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
             FS+  HL  H+RIH+GE+PY+C  C KTF+R + L  H+R+HTGE+PY C  CG AF+Q+
Sbjct:   333 FSRVTHLTQHQRIHTGEKPYKCGECGKTFSRSTHLTQHQRVHTGERPYECDACGKAFSQS 392

Query:    63 THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
             THL  H ++     HTGEKP+ CD C   FSD  AL RH  IH
Sbjct:   393 THLTQHQRI-----HTGEKPYKCDACGRAFSDCSALIRHLRIH 430

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=NAS

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|P17020 ZNF16 "Zinc finger protein 16" [Homo sapiens (taxid:9606)]

 Score = 314 (115.6 bits), Expect = 3.0e-27, P = 3.0e-27
 Identities = 53/103 (51%), Positives = 73/103 (70%)

Query:     3 FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
             FSQS HL+ H+R+H+GE+PY+C  C K F+R S L  H R+HTGEKPY+CS CG AF+Q+
Sbjct:   386 FSQSAHLRKHQRVHTGEKPYECNDCGKPFSRVSNLIKHHRVHTGEKPYKCSDCGKAFSQS 445

Query:    63 THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
             + L  H ++     HTGEKPH C++C   FS    L++H++IH
Sbjct:   446 SSLIQHRRI-----HTGEKPHVCNVCGKAFSYSSVLRKHQIIH 483

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1MJD3 ZNF16 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 311 (114.5 bits), Expect = 5.3e-27, P = 5.3e-27
 Identities = 53/103 (51%), Positives = 71/103 (68%)

Query:     3 FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
             FSQS H++ H+R+H+GERPY C  C K F+R S L  H R+HTGEKPY+CS CG AF+Q+
Sbjct:   342 FSQSSHMRKHQRVHTGERPYSCSECGKPFSRVSNLIKHHRVHTGEKPYKCSECGKAFSQS 401

Query:    63 THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
             + L  H ++     HTGEKPH C +C   FS    L++H++IH
Sbjct:   402 SSLIQHRRI-----HTGEKPHVCAVCGKAFSYSSVLRKHQIIH 439

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|A6NK21 A6NK21 "Putative zinc finger protein LOC730110" [Homo sapiens (taxid:9606)]

 Score = 307 (113.1 bits), Expect = 8.4e-27, P = 8.4e-27
 Identities = 63/169 (37%), Positives = 87/169 (51%)

Query:     3 FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
             F QS  L  H+RIHSGE+ Y+CEVC K F+R S L  H+RIHTGEKPY+C  CG AFN +
Sbjct:   352 FKQSSTLTTHKRIHSGEKFYKCEVCSKAFSRFSHLTTHKRIHTGEKPYKCEECGKAFNLS 411

Query:    63 THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNXXXXXXX 122
             +HL  H K+    +HTGEKP+ C+ C   F+    L +H++IH                 
Sbjct:   412 SHLTTH-KI----IHTGEKPYKCEECGKAFNQSSTLSKHKVIHTGEKPYKCGECGKAFNQ 466

Query:   123 XXXXXXXXXXXXXLEEWKCESSRLIFEAWAKLQKELLSQSGYPYHKLQS 171
                           + +KCE     F   + L +  +  +G   +KL+S
Sbjct:   467 SSHLTTHKIIHTGEKPYKCEECGKAFNNSSILNRHKMIHTGEKLYKLES 515

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q9UII5 ZNF107 "Zinc finger protein 107" [Homo sapiens (taxid:9606)]

 Score = 306 (112.8 bits), Expect = 3.1e-26, P = 3.1e-26
 Identities = 55/168 (32%), Positives = 89/168 (52%)

Query:     3 FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
             F++S  L  H++IH+GE+PY+CE C++ F++ S L  H++IHTGEKPY+C  CG AFN+ 
Sbjct:   421 FNRSSTLTRHKKIHTGEKPYKCEECDRAFSQSSNLTEHKKIHTGEKPYKCEECGKAFNRF 480

Query:    63 THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNXXXXXXX 122
             + L  H ++     HTGEKP+ C+ C   F+  + L RH+++H K   N           
Sbjct:   481 STLTKHKRI-----HTGEKPYKCEECGKAFNQSYQLTRHKIVHTKEKLNKCEEFGKAFKQ 535

Query:   123 XXXXXXXXXXXXXLEEWKCESSRLIFEAWAKLQKELLSQSGYPYHKLQ 170
                           + +KCE    +F   + L  + +  +G   +K +
Sbjct:   536 SSHRTIHKIIHTGEKPYKCEEHGKVFNQSSNLTTQKIIHTGENLYKFE 583

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P10073	ZSC22_HUMAN	No assigned EC number	0.5339	0.4827	0.1995	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	203
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	8e-05
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	4e-04

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 38.1 bits (89), Expect = 8e-05
 Identities = 13/26 (50%), Positives = 20/26 (76%)

Query: 8  HLKNHERIHSGERPYQCEVCEKTFAR 33
          +L+ H R H+GE+PY+C VC K+F+ 
Sbjct: 1  NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 36.2 bits (84), Expect = 4e-04
 Identities = 14/25 (56%), Positives = 18/25 (72%)

Query: 37 LWNHRRIHTGEKPYRCSICGSAFNQ 61
          L  H R HTGEKPY+C +CG +F+ 
Sbjct: 2  LRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	203
KOG2462|consensus	279		99.93
KOG2462|consensus	279		99.86
KOG1074|consensus	958		99.73
KOG3576|consensus	267		99.72
KOG3608|consensus	467		99.7
KOG3608|consensus	467		99.69
KOG1074|consensus	958		99.67
KOG3576|consensus	267		99.56
KOG3623|consensus	1007		99.45
KOG3623|consensus	1007		99.43
KOG3993|consensus	500		99.24
PHA00733	128	hypothetical protein	99.19
PHA00733	128	hypothetical protein	99.09
PHA02768	55	hypothetical protein; Provisional	98.97
PLN03086	567	PRLI-interacting factor K; Provisional	98.92
PLN03086	567	PRLI-interacting factor K; Provisional	98.89
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.87
KOG3993|consensus	500		98.82
PHA02768	55	hypothetical protein; Provisional	98.68
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.68
PHA00616	44	hypothetical protein	98.54
PHA00732	79	hypothetical protein	98.31
PHA00616	44	hypothetical protein	98.24
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.19
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.12
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.08
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.04
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.01
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.98
PHA00732	79	hypothetical protein	97.93
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.93
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.93
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.8
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.72
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.69
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.68
KOG1146|consensus	1406		97.57
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.36
smart00355	26	ZnF_C2H2 zinc finger.	97.11
smart00355	26	ZnF_C2H2 zinc finger.	97.1
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.07
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.0
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.0
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.89
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.72
PRK04860	160	hypothetical protein; Provisional	96.65
KOG4173|consensus	253		96.63
KOG2231|consensus	669		96.43
KOG1146|consensus	1406		96.41
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.36
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.05
KOG2482|consensus	423		96.03
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.92
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.42
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	95.39
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.05
COG5048	467	FOG: Zn-finger [General function prediction only]	94.85
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.59
COG4049	65	Uncharacterized protein containing archaeal-type C	94.56
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.49
PRK04860	160	hypothetical protein; Provisional	94.49
KOG2785|consensus	390		94.43
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.36
KOG2893|consensus	341		94.23
KOG2482|consensus	423		94.12
KOG4173|consensus	253		93.84
KOG2186|consensus	276		93.66
COG4049	65	Uncharacterized protein containing archaeal-type C	92.79
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	92.02
KOG2231|consensus	669		91.68
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	91.17
KOG2893|consensus	341		89.91
COG5048	467	FOG: Zn-finger [General function prediction only]	89.69
KOG4167|consensus	907		88.87
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	88.2
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	88.15
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	87.69
KOG2785|consensus	390		87.29
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	86.0
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	85.87
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	85.71
COG1592	166	Rubrerythrin [Energy production and conversion]	84.05
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	83.94
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	83.91
smart00531	147	TFIIE Transcription initiation factor IIE.	82.83
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	82.16
KOG0717|consensus	508		81.66
PRK06266	178	transcription initiation factor E subunit alpha; V	81.38
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	81.27
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	81.09
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	80.15
PF00301	47	Rubredoxin: Rubredoxin; InterPro: IPR004039 Rubred	80.05

>KOG2462|consensus

Probab=99.93  E-value=4.1e-26  Score=170.95  Aligned_cols=127  Identities=31%  Similarity=0.600  Sum_probs=116.7

Q ss_pred             CCCCChhHHHHHHHHhCC---CCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCcccc
Q psy2103           1 MLFSQSPHLKNHERIHSG---ERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVH   77 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~   77 (203)
                      |.|.+.++|-+|.++|..   .+.+.|.+|++.|.+...|..|+++|.-  +++|.+||+.|.+...|..|++     .|
T Consensus       138 k~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l--~c~C~iCGKaFSRPWLLQGHiR-----TH  210 (279)
T KOG2462|consen  138 KSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTL--PCECGICGKAFSRPWLLQGHIR-----TH  210 (279)
T ss_pred             cccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCC--CcccccccccccchHHhhcccc-----cc
Confidence            467888999999999963   5679999999999999999999999984  6899999999999999999995     89


Q ss_pred             CCCCCcccCCCCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHH
Q psy2103          78 TGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKE  157 (203)
Q Consensus        78 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H  157 (203)
                      +|+|||.|+.|++.|..+++|+.|+++|-+.                            +.|+|..|++.|...+.|.+|
T Consensus       211 TGEKPF~C~hC~kAFADRSNLRAHmQTHS~~----------------------------K~~qC~~C~KsFsl~SyLnKH  262 (279)
T KOG2462|consen  211 TGEKPFSCPHCGKAFADRSNLRAHMQTHSDV----------------------------KKHQCPRCGKSFALKSYLNKH  262 (279)
T ss_pred             cCCCCccCCcccchhcchHHHHHHHHhhcCC----------------------------ccccCcchhhHHHHHHHHHHh
Confidence            9999999999999999999999999999553                            679999999999999999999


Q ss_pred             Hhhcc
Q psy2103         158 LLSQS  162 (203)
Q Consensus       158 ~~~h~  162 (203)
                      ...-.
T Consensus       263 ~ES~C  267 (279)
T KOG2462|consen  263 SESAC  267 (279)
T ss_pred             hhhcc
Confidence            87654

>KOG2462|consensus

Probab=99.86  E-value=1.1e-22  Score=152.66  Aligned_cols=98  Identities=38%  Similarity=0.726  Sum_probs=93.0

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCC
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE   80 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   80 (203)
                      |+|.+..+|+.|+++|.  .+++|.+||+.|....-|+.|+|+|+|||||.|+.|++.|..+++|+.||+     .|.+.
T Consensus       169 K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQ-----THS~~  241 (279)
T KOG2462|consen  169 KVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQ-----THSDV  241 (279)
T ss_pred             ceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHH-----hhcCC
Confidence            57888899999999997  579999999999999999999999999999999999999999999999997     79999


Q ss_pred             CCcccCCCCccCCChHHHHHHHHHh
Q psy2103          81 KPHHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        81 ~~~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      +.|.|..|++.|..++.|.+|.+.-
T Consensus       242 K~~qC~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  242 KKHQCPRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             ccccCcchhhHHHHHHHHHHhhhhc
Confidence            9999999999999999999998764

>KOG1074|consensus

Probab=99.73  E-value=2.7e-19  Score=151.03  Aligned_cols=88  Identities=26%  Similarity=0.478  Sum_probs=77.0

Q ss_pred             eeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCCC
Q psy2103          50 YRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTP  129 (203)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (203)
                      -.|.+|.++....++|+.|.+     .|+|+++|+|.+|++.|+++.+|+.|+-.|.....-                  
T Consensus       606 NqCiiC~rVlSC~saLqmHyr-----tHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~------------------  662 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYR-----THTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPA------------------  662 (958)
T ss_pred             cceeeeeecccchhhhhhhhh-----cccCcCccccccccchhccccchhhcccccccCccc------------------
Confidence            689999999999999999995     899999999999999999999999999998543210                  


Q ss_pred             CCCCCCCcccccc---hhhHhHHHHHHHHHHHhhccCCCc
Q psy2103         130 THSSSQLEEWKCE---SSRLIFEAWAKLQKELLSQSGYPY  166 (203)
Q Consensus       130 ~~~~~~~~~~~C~---~C~~~f~~~~~l~~H~~~h~~~~~  166 (203)
                            ...|.|+   +|-+.|...-.|.+|++.|.+...
T Consensus       663 ------R~q~ScP~~~ic~~kftn~V~lpQhIriH~~~~~  696 (958)
T KOG1074|consen  663 ------RVQFSCPSTFICQKKFTNAVTLPQHIRIHLGGQI  696 (958)
T ss_pred             ------cccccCCchhhhcccccccccccceEEeecCCCC
Confidence                  1347799   999999999999999999986543

>KOG3576|consensus

Probab=99.72  E-value=5e-19  Score=127.15  Aligned_cols=126  Identities=24%  Similarity=0.489  Sum_probs=112.0

Q ss_pred             CCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHH
Q psy2103          18 GERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFA   97 (203)
Q Consensus        18 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~   97 (203)
                      +...|.|.+|++.|....-|.+||+-|...+.+-|..||++|...-+|.+|++     .|+|.++|+|..|++.|+.+-.
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~r-----thtgvrpykc~~c~kaftqrcs  188 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTR-----THTGVRPYKCSLCEKAFTQRCS  188 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhc-----cccCccccchhhhhHHHHhhcc
Confidence            34559999999999999999999999999999999999999999999999995     8999999999999999999999


Q ss_pred             HHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhhccCCC
Q psy2103          98 LKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQSGYP  165 (203)
Q Consensus        98 L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  165 (203)
                      |..|++.-|+.+.........                 ...|.|+.||.+-.....+..|+..|+...
T Consensus       189 leshl~kvhgv~~~yaykerr-----------------~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  189 LESHLKKVHGVQHQYAYKERR-----------------AKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HHHHHHHHcCchHHHHHHHhh-----------------hheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence            999999988876544433322                 278999999999999999999999987653

>KOG3608|consensus

Probab=99.70  E-value=2.5e-17  Score=127.44  Aligned_cols=131  Identities=24%  Similarity=0.502  Sum_probs=102.0

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHH-hcCCCCeeCcchhhhccChhHHHhhhhcCCccccCC
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRI-HTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTG   79 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~   79 (203)
                      |.|.+...|+.|++.|-.  -|+|++|+.+....++|..||+. |...+||+|+.|++.|.+.++|..|..     .|. 
T Consensus       245 KrFaTeklL~~Hv~rHvn--~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~-----~HS-  316 (467)
T KOG3608|consen  245 KRFATEKLLKSHVVRHVN--CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ-----VHS-  316 (467)
T ss_pred             HHHhHHHHHHHHHHHhhh--cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH-----hcc-
Confidence            467777888888887753  47888888888888888888764 556788888888888888888888885     455 


Q ss_pred             CCCcccCC--CCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHH
Q psy2103          80 EKPHHCDI--CDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKE  157 (203)
Q Consensus        80 ~~~~~C~~--C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H  157 (203)
                      +..|.|..  |.++|++..+|++|++.++..                         .....|.|-.|++.|.+..+|.+|
T Consensus       317 ~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg-------------------------~np~~Y~CH~Cdr~ft~G~~L~~H  371 (467)
T KOG3608|consen  317 KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEG-------------------------NNPILYACHCCDRFFTSGKSLSAH  371 (467)
T ss_pred             ccceecCCCCCcHHHHHHHHHHHHHHHhccC-------------------------CCCCceeeecchhhhccchhHHHH
Confidence            66788877  888888888888887766531                         123679999999999999999999


Q ss_pred             HhhccCC
Q psy2103         158 LLSQSGY  164 (203)
Q Consensus       158 ~~~h~~~  164 (203)
                      +...++.
T Consensus       372 L~kkH~f  378 (467)
T KOG3608|consen  372 LMKKHGF  378 (467)
T ss_pred             HHHhhcc
Confidence            8776554

>KOG3608|consensus

Probab=99.69  E-value=1.1e-16  Score=123.92  Aligned_cols=152  Identities=20%  Similarity=0.415  Sum_probs=102.3

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhc--CCCCeeCcchhhhccChhHHHhhhhcCCccccC
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHT--GEKPYRCSICGSAFNQATHLKNHAKVGKCKVHT   78 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   78 (203)
                      ++|.+++.|++|++.|.+++...|+.||.-|.++..|-.|.+..+  ..++|.|..|.+.|.++..|..|+.     .|.
T Consensus       187 ~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~-----rHv  261 (467)
T KOG3608|consen  187 KHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVV-----RHV  261 (467)
T ss_pred             hhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHH-----Hhh
Confidence            368899999999999999999999999999999999999987554  3457888888888888888888874     332


Q ss_pred             CCCCcccCCCCccCCChHHHHHHHHHhhhhhcCcccc---CCCCCCCCCCCCCCCCCCCCCcccccch--hhHhHHHHHH
Q psy2103          79 GEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVN---QSHDSQTTPPQSTPTHSSSQLEEWKCES--SRLIFEAWAK  153 (203)
Q Consensus        79 ~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~  153 (203)
                        .-|+|+.|......++.|..|++..|...++..+.   ...........+...++   ...|.|+.  |.+.|+....
T Consensus       262 --n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS---~~~y~C~h~~C~~s~r~~~q  336 (467)
T KOG3608|consen  262 --NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS---KTVYQCEHPDCHYSVRTYTQ  336 (467)
T ss_pred             --hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc---ccceecCCCCCcHHHHHHHH
Confidence              23777777777777777777777665443222221   11111111111111111   25677755  7777777777


Q ss_pred             HHHHHhhcc
Q psy2103         154 LQKELLSQS  162 (203)
Q Consensus       154 l~~H~~~h~  162 (203)
                      |.+|++.++
T Consensus       337 ~~~H~~evh  345 (467)
T KOG3608|consen  337 MRRHFLEVH  345 (467)
T ss_pred             HHHHHHHhc
Confidence            777776654

>KOG1074|consensus

Probab=99.67  E-value=3.3e-17  Score=138.57  Aligned_cols=104  Identities=28%  Similarity=0.634  Sum_probs=75.2

Q ss_pred             CCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCC----CCeeCc---chhhhccChhHHHhhhhcCCc
Q psy2103           2 LFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE----KPYRCS---ICGSAFNQATHLKNHAKVGKC   74 (203)
Q Consensus         2 ~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~----~~~~C~---~C~~~f~~~~~l~~H~~~~~~   74 (203)
                      +....++|+.|.++|.||+||+|.+||+.|.++.+|+.||..|-..    -.+.|+   +|-+.|.+.-.|.+|++.|-+
T Consensus       614 VlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQhIriH~~  693 (958)
T KOG1074|consen  614 VLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQHIRIHLG  693 (958)
T ss_pred             cccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccccceEEeecC
Confidence            4567899999999999999999999999999999999999988653    347788   888999999999999875331


Q ss_pred             c-ccCC----C---CCcccCCCCccCCChHHHHHHHHHh
Q psy2103          75 K-VHTG----E---KPHHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        75 ~-~~~~----~---~~~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      - ...+    +   ..-.|..|.+.|.....+..++-.+
T Consensus       694 ~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~  732 (958)
T KOG1074|consen  694 GQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQ  732 (958)
T ss_pred             CCCCCCcccccccchhcccchhhhcccccccchhhhhcc
Confidence            0 0001    0   1135555555555555555554333

>KOG3576|consensus

Probab=99.56  E-value=9.2e-16  Score=110.46  Aligned_cols=108  Identities=30%  Similarity=0.480  Sum_probs=94.6

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCcccc---
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVH---   77 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~---   77 (203)
                      |.|...-.|.+|++.|...+.|-|..||+.|.+...|.+|+++|+|.+||+|..|++.|..+..|..|++..|...+   
T Consensus       125 K~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~ya  204 (267)
T KOG3576|consen  125 KKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYA  204 (267)
T ss_pred             hhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHH
Confidence            45666677999999999999999999999999999999999999999999999999999999999999984333211   


Q ss_pred             ---CCCCCcccCCCCccCCChHHHHHHHHHhhhh
Q psy2103          78 ---TGEKPHHCDICDVGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        78 ---~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~  108 (203)
                         ...+.|.|..||+.-.....+..|++.+|..
T Consensus       205 ykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  205 YKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             HHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence               2347799999999999999999999998754

>KOG3623|consensus

Probab=99.45  E-value=2.9e-14  Score=119.47  Aligned_cols=80  Identities=39%  Similarity=0.855  Sum_probs=76.2

Q ss_pred             CCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHH
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFAL   98 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L   98 (203)
                      +.+|.|++|++.|.-.+.|.+|.-.|+|.+||.|.+|.+.|+.+-.|..|++     .|.|+++|.|+.|++.|+....+
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkR-----LHSGEKPfQCdKClKRFSHSGSY  966 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKR-----LHSGEKPFQCDKCLKRFSHSGSY  966 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhh-----hccCCCcchhhhhhhhcccccch
Confidence            4579999999999999999999999999999999999999999999999995     99999999999999999999999


Q ss_pred             HHHHH
Q psy2103          99 KRHRL  103 (203)
Q Consensus        99 ~~H~~  103 (203)
                      ..||.
T Consensus       967 SQHMN  971 (1007)
T KOG3623|consen  967 SQHMN  971 (1007)
T ss_pred             Hhhhc
Confidence            99974

>KOG3623|consensus

Probab=99.43  E-value=1.6e-13  Score=115.15  Aligned_cols=96  Identities=32%  Similarity=0.652  Sum_probs=84.5

Q ss_pred             hHHHHHHHHhC--CCCceecccccccccChhhHHHHHHHhcCC-------------CCeeCcchhhhccChhHHHhhhhc
Q psy2103           7 PHLKNHERIHS--GERPYQCEVCEKTFARHSTLWNHRRIHTGE-------------KPYRCSICGSAFNQATHLKNHAKV   71 (203)
Q Consensus         7 ~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~-------------~~~~C~~C~~~f~~~~~l~~H~~~   71 (203)
                      ..|+.|++..+  .+..|.|.+|.++|.+...|.+||.+|...             +.|+|..|++.|+.+-.|..|++ 
T Consensus       224 tslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlR-  302 (1007)
T KOG3623|consen  224 TSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLR-  302 (1007)
T ss_pred             HHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhhe-
Confidence            56889977644  345699999999999999999999999542             45999999999999999999995 


Q ss_pred             CCccccCCCCCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          72 GKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        72 ~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                          .|.|+++|.|+.|++.|+....+..|+-....
T Consensus       303 ----IHSGEKPfeCpnCkKRFSHSGSySSHmSSKKC  334 (1007)
T KOG3623|consen  303 ----IHSGEKPFECPNCKKRFSHSGSYSSHMSSKKC  334 (1007)
T ss_pred             ----eecCCCCcCCcccccccccCCcccccccccch
Confidence                99999999999999999999999999876653

>KOG3993|consensus

Probab=99.24  E-value=3.1e-12  Score=101.49  Aligned_cols=86  Identities=24%  Similarity=0.551  Sum_probs=71.8

Q ss_pred             eecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCcccc------------------------
Q psy2103          22 YQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVH------------------------   77 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~------------------------   77 (203)
                      |.|.+|...|.+...|.+|.-..-..-.|+|+.|+++|...++|..|.++|+-|..                        
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            99999999999999999997433333359999999999999999999998873211                        


Q ss_pred             ----CCCCCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          78 ----TGEKPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        78 ----~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                          ..+..|.|..|++.|+++..|+.|+.+|+.
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence                112369999999999999999999988873

>PHA00733 hypothetical protein

Probab=99.19  E-value=1.8e-11  Score=84.53  Aligned_cols=94  Identities=18%  Similarity=0.315  Sum_probs=74.5

Q ss_pred             HHHHHHHHhCCCCceecccccccccChhhHHHH--HH---HhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCC
Q psy2103           8 HLKNHERIHSGERPYQCEVCEKTFARHSTLWNH--RR---IHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKP   82 (203)
Q Consensus         8 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H--~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   82 (203)
                      .|.++-..-..++++.|.+|...|.....|..+  ++   .+++.++|.|..|++.|.+...|..|+.     .+  ..+
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r-----~h--~~~   99 (128)
T PHA00733         27 ELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIR-----YT--EHS   99 (128)
T ss_pred             HhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHh-----cC--CcC
Confidence            344443333346789999999999988777776  22   2345779999999999999999999996     34  346


Q ss_pred             cccCCCCccCCChHHHHHHHHHhhhh
Q psy2103          83 HHCDICDVGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        83 ~~C~~C~~~f~~~~~L~~H~~~~~~~  108 (203)
                      |.|+.|++.|.....|..|+...|+.
T Consensus       100 ~~C~~CgK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733        100 KVCPVCGKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             ccCCCCCCccCCHHHHHHHHHHhcCc
Confidence            99999999999999999999888763

>PHA00733 hypothetical protein

Probab=99.09  E-value=5.9e-11  Score=82.02  Aligned_cols=87  Identities=15%  Similarity=0.169  Sum_probs=70.5

Q ss_pred             CCCCeeCcchhhhccChhHHHhh--hhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCC
Q psy2103          46 GEKPYRCSICGSAFNQATHLKNH--AKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTT  123 (203)
Q Consensus        46 ~~~~~~C~~C~~~f~~~~~l~~H--~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~  123 (203)
                      ..+.+.|.+|...|.....|..+  +..+  ..+.+.++|.|+.|++.|.+...|..|++.+.                 
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~-----------------   97 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKL--LTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTE-----------------   97 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhh--cccCCCCCccCCCCCCcCCCHHHHHHHHhcCC-----------------
Confidence            35679999999999998888877  2211  13445789999999999999999999987640                 


Q ss_pred             CCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhhccCC
Q psy2103         124 PPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       124 ~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                                   .+|.|..|++.|.....|..|++..++.
T Consensus        98 -------------~~~~C~~CgK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733         98 -------------HSKVCPVCGKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             -------------cCccCCCCCCccCCHHHHHHHHHHhcCc
Confidence                         2378999999999999999999887653

>PHA02768 hypothetical protein; Provisional

Probab=98.97  E-value=2.3e-10  Score=65.90  Aligned_cols=43  Identities=19%  Similarity=0.475  Sum_probs=33.1

Q ss_pred             eecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHH
Q psy2103          22 YQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLK   66 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   66 (203)
                      |.|+.||+.|....+|..||++|+  ++++|..|++.|...+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            778888888888888888888877  4677888888777666554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.92  E-value=1.8e-09  Score=90.76  Aligned_cols=101  Identities=16%  Similarity=0.380  Sum_probs=77.2

Q ss_pred             CceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCC-----
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSD-----   94 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~-----   94 (203)
                      +.+.|+.|++.|. ...|..|+..++  +++.|+ |+..+ .+..|..|+.     .|...+++.|..|++.|..     
T Consensus       452 ~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~-----thCp~Kpi~C~fC~~~v~~g~~~~  521 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQA-----STCPLRLITCRFCGDMVQAGGSAM  521 (567)
T ss_pred             cCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhh-----ccCCCCceeCCCCCCccccCcccc
Confidence            3467899999985 678999999886  579999 99755 6688999985     7888899999999998852     


Q ss_pred             -----hHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhh
Q psy2103          95 -----KFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLS  160 (203)
Q Consensus        95 -----~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  160 (203)
                           ...|..|.... +                            ...+.|..||+.|.. ..|..|+..
T Consensus       522 d~~d~~s~Lt~HE~~C-G----------------------------~rt~~C~~Cgk~Vrl-rdm~~H~~~  562 (567)
T PLN03086        522 DVRDRLRGMSEHESIC-G----------------------------SRTAPCDSCGRSVML-KEMDIHQIA  562 (567)
T ss_pred             chhhhhhhHHHHHHhc-C----------------------------CcceEccccCCeeee-hhHHHHHHH
Confidence                 34666776553 1                            256889999988865 466677755

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.89  E-value=3.6e-09  Score=89.03  Aligned_cols=93  Identities=18%  Similarity=0.464  Sum_probs=76.5

Q ss_pred             CCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhcc----------ChhHHHhhhhc
Q psy2103           2 LFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN----------QATHLKNHAKV   71 (203)
Q Consensus         2 ~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~----------~~~~l~~H~~~   71 (203)
                      .|. ..+|..|+..++  .++.|+ |+..+ ....|..|+.+|.+.+++.|..|+..|.          ....|..|.. 
T Consensus       462 ~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~-  535 (567)
T PLN03086        462 AFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHES-  535 (567)
T ss_pred             ccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHH-
Confidence            454 578999999986  789999 99765 6689999999999999999999999984          2357999985 


Q ss_pred             CCccccCCCCCcccCCCCccCCChHHHHHHHHHhh
Q psy2103          72 GKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        72 ~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                           ..+.+++.|..|++.+..+ .|..|+...|
T Consensus       536 -----~CG~rt~~C~~Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        536 -----ICGSRTAPCDSCGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             -----hcCCcceEccccCCeeeeh-hHHHHHHHhh
Confidence                 4699999999999999877 4567765544

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.87  E-value=1.9e-09  Score=53.23  Aligned_cols=25  Identities=48%  Similarity=1.159  Sum_probs=19.1

Q ss_pred             HHHHHHHHhCCCCceeccccccccc
Q psy2103           8 HLKNHERIHSGERPYQCEVCEKTFA   32 (203)
Q Consensus         8 ~l~~H~~~h~~~~~~~C~~C~~~f~   32 (203)
                      +|++||++|.+++||.|++|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4677777777777788887777775

...

>KOG3993|consensus

Probab=98.82  E-value=2.1e-09  Score=85.66  Aligned_cols=114  Identities=21%  Similarity=0.331  Sum_probs=78.4

Q ss_pred             eeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhhhcCc--cccCCC---CCCCCC
Q psy2103          50 YRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNS--TVNQSH---DSQTTP  124 (203)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~--~~~~~~---~~~~~~  124 (203)
                      |+|..|...|...=.|.+|.=     .-.--.-|+|+.|+|.|.-..+|..|++=|..-....  ......   ......
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC-----~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~  342 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRC-----PRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEV  342 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccC-----CeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhh
Confidence            899999999999999999962     1112234999999999999999999999986322111  111100   000000


Q ss_pred             CCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhhccCCCccc
Q psy2103         125 PQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQSGYPYHK  168 (203)
Q Consensus       125 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  168 (203)
                      ......-.+...+.|.|..|++.|+....|+.|+.+|+..+..+
T Consensus       343 ~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k  386 (500)
T KOG3993|consen  343 QEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAK  386 (500)
T ss_pred             hhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccch
Confidence            11111222234468999999999999999999999998766555

>PHA02768 hypothetical protein; Provisional

Probab=98.68  E-value=6.9e-09  Score=59.81  Aligned_cols=44  Identities=18%  Similarity=0.333  Sum_probs=39.0

Q ss_pred             CeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHH
Q psy2103          49 PYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALK   99 (203)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~   99 (203)
                      .|.|+.||+.|...+.|..|++     .|.  ++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r-----~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLR-----KHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHH-----hcC--CcccCCcccceecccceeE
Confidence            5899999999999999999997     666  6899999999999877664

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.68  E-value=1.3e-08  Score=50.19  Aligned_cols=26  Identities=54%  Similarity=1.161  Sum_probs=21.1

Q ss_pred             hHHHHHHHhcCCCCeeCcchhhhccC
Q psy2103          36 TLWNHRRIHTGEKPYRCSICGSAFNQ   61 (203)
Q Consensus        36 ~L~~H~~~h~~~~~~~C~~C~~~f~~   61 (203)
                      +|..||++|+++++|.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47888888888888888888888753

...

>PHA00616 hypothetical protein

Probab=98.54  E-value=3.8e-08  Score=54.02  Aligned_cols=34  Identities=18%  Similarity=0.300  Sum_probs=29.5

Q ss_pred             ceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      ||+|..||+.|..++.|..|++.|++++++.|..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5889999999999999999999999988887764

>PHA00732 hypothetical protein

Probab=98.31  E-value=3.2e-07  Score=57.76  Aligned_cols=45  Identities=22%  Similarity=0.521  Sum_probs=36.4

Q ss_pred             ceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhh
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      ||.|..|++.|.+...|..|++.++.  ++.|..|++.|.   .|..|+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~--~~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT--LTKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC--CCccCCCCCEeC---Chhhhhc
Confidence            58899999999999999999985332  357999999997   4778875

>PHA00616 hypothetical protein

Probab=98.24  E-value=9.8e-07  Score=48.46  Aligned_cols=30  Identities=20%  Similarity=0.195  Sum_probs=27.3

Q ss_pred             ccccchhhHhHHHHHHHHHHHhhccCCCcc
Q psy2103         138 EWKCESSRLIFEAWAKLQKELLSQSGYPYH  167 (203)
Q Consensus       138 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  167 (203)
                      +|+|..||+.|...+.|.+|++.|+|++.-
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~   30 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKL   30 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcc
Confidence            589999999999999999999999998543

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.19  E-value=1.9e-06  Score=50.41  Aligned_cols=50  Identities=26%  Similarity=0.448  Sum_probs=25.5

Q ss_pred             eeCcchhhhccChhHHHhhhhcCCccccCC-CCCcccCCCCccCCChHHHHHHHHHhh
Q psy2103          50 YRCSICGSAFNQATHLKNHAKVGKCKVHTG-EKPHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~-~~~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      |.|+.|++ ..+...|..|...    .|.. .+.+.||+|...++  .+|..|+...|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~----~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCED----EHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHh----HCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            55666666 3334556666552    3332 23466666665433  25666665544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.12  E-value=2.2e-06  Score=40.79  Aligned_cols=23  Identities=43%  Similarity=0.918  Sum_probs=17.7

Q ss_pred             eecccccccccChhhHHHHHHHh
Q psy2103          22 YQCEVCEKTFARHSTLWNHRRIH   44 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~~h   44 (203)
                      |.|++|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            67788888888888888887764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.08  E-value=7.4e-06  Score=47.84  Aligned_cols=53  Identities=17%  Similarity=0.154  Sum_probs=41.4

Q ss_pred             CcccCCCCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhhc
Q psy2103          82 PHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQ  161 (203)
Q Consensus        82 ~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  161 (203)
                      .|.||.|++ ..+...|..|....|...                          ...+.|++|...+.  .+|.+|+..+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~--------------------------~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSE--------------------------SKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCC--------------------------CCCccCCCchhhhh--hHHHHHHHHh
Confidence            489999999 566789999988776532                          14578999999765  4999999886


Q ss_pred             cC
Q psy2103         162 SG  163 (203)
Q Consensus       162 ~~  163 (203)
                      ++
T Consensus        53 H~   54 (54)
T PF05605_consen   53 HR   54 (54)
T ss_pred             cC
Confidence            53

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.04  E-value=1e-06  Score=42.01  Aligned_cols=23  Identities=17%  Similarity=0.416  Sum_probs=21.5

Q ss_pred             cccchhhHhHHHHHHHHHHHhhc
Q psy2103         139 WKCESSRLIFEAWAKLQKELLSQ  161 (203)
Q Consensus       139 ~~C~~C~~~f~~~~~l~~H~~~h  161 (203)
                      |+|+.|++.|.++..|.+|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.01  E-value=1.7e-06  Score=57.06  Aligned_cols=73  Identities=21%  Similarity=0.296  Sum_probs=22.0

Q ss_pred             ccCCCCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhhc
Q psy2103          84 HCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQ  161 (203)
Q Consensus        84 ~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  161 (203)
                      .|..|+..|.+...|..|+...|+.......... .    ...............+.|..|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~-~----~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLV-D----PNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccccccccc-c----ccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            3777777777777788887766665432110000 0    00000011111123699999999999999999999975

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.98  E-value=4.3e-06  Score=55.15  Aligned_cols=74  Identities=20%  Similarity=0.383  Sum_probs=22.4

Q ss_pred             ecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHH
Q psy2103          23 QCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHR  102 (203)
Q Consensus        23 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~  102 (203)
                      +|..|+..|.+...|..||...++-.   -. ....+.....+..++.      ......+.|..|++.|.+...|..|+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~---~~-~~~~l~~~~~~~~~~~------~~~~~~~~C~~C~~~f~s~~~l~~Hm   70 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFD---IP-DQKYLVDPNRLLNYLR------KKVKESFRCPYCNKTFRSREALQEHM   70 (100)
T ss_dssp             ----------------------------------------------------------SSEEBSSSS-EESSHHHHHHHH
T ss_pred             Cccccccccccccccccccccccccc---cc-cccccccccccccccc------cccCCCCCCCccCCCCcCHHHHHHHH
Confidence            58999999999999999998776542   11 1122224444444442      12223699999999999999999999


Q ss_pred             HHhh
Q psy2103         103 LIHE  106 (203)
Q Consensus       103 ~~~~  106 (203)
                      +.++
T Consensus        71 ~~~~   74 (100)
T PF12756_consen   71 RSKH   74 (100)
T ss_dssp             HHTT
T ss_pred             cCcc
Confidence            9864

>PHA00732 hypothetical protein

Probab=97.93  E-value=5.9e-06  Score=52.05  Aligned_cols=47  Identities=30%  Similarity=0.631  Sum_probs=38.0

Q ss_pred             CeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHh
Q psy2103          49 PYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      ||.|..|++.|.+...|..|++.    .|.   ++.|+.|++.|.   .|..|...+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~----~H~---~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARR----NHT---LTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhc----ccC---CCccCCCCCEeC---Chhhhhccc
Confidence            58899999999999999999962    233   358999999998   477787544

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.93  E-value=9e-06  Score=38.83  Aligned_cols=24  Identities=42%  Similarity=0.880  Sum_probs=16.6

Q ss_pred             eecccccccccChhhHHHHHHHhc
Q psy2103          22 YQCEVCEKTFARHSTLWNHRRIHT   45 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~~h~   45 (203)
                      |.|++|+..|.+...|..|++.++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            577888888888888888877654

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.93  E-value=3.2e-06  Score=65.61  Aligned_cols=57  Identities=32%  Similarity=0.716  Sum_probs=45.8

Q ss_pred             CCCeeCcc--hhhhccChhHHHhhhhcCCccc--------------cCCCCCcccCCCCccCCChHHHHHHHH
Q psy2103          47 EKPYRCSI--CGSAFNQATHLKNHAKVGKCKV--------------HTGEKPHHCDICDVGFSDKFALKRHRL  103 (203)
Q Consensus        47 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~--------------~~~~~~~~C~~C~~~f~~~~~L~~H~~  103 (203)
                      ++||+|++  |++.|++...|..|+..+|+..              -..++||+|+.|++.|+....|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            47899988  9999999999999988777421              223488999999999999999888864

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.80  E-value=1e-05  Score=40.01  Aligned_cols=25  Identities=44%  Similarity=0.963  Sum_probs=16.0

Q ss_pred             ceecccccccccChhhHHHHHHHhc
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHT   45 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~   45 (203)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4666666666666666666665553

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.72  E-value=2.7e-05  Score=37.12  Aligned_cols=24  Identities=33%  Similarity=0.695  Sum_probs=13.8

Q ss_pred             cccCCCCccCCChHHHHHHHHHhh
Q psy2103          83 HHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        83 ~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      |.|+.|++.|.+...|..|+..+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456666666666666666666553

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.69  E-value=1.7e-05  Score=61.69  Aligned_cols=53  Identities=34%  Similarity=0.767  Sum_probs=46.0

Q ss_pred             CCCceeccc--ccccccChhhHHHHHHHhc-------------------CCCCeeCcchhhhccChhHHHhhhh
Q psy2103          18 GERPYQCEV--CEKTFARHSTLWNHRRIHT-------------------GEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        18 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~-------------------~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      +++||+|++  |++.+++...|.-||.-=|                   ..|||+|.+|++.|++...|..|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            358999998  9999999999999986322                   1378999999999999999999984

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.68  E-value=1e-05  Score=40.04  Aligned_cols=26  Identities=15%  Similarity=0.387  Sum_probs=23.8

Q ss_pred             ccccchhhHhHHHHHHHHHHHhhccC
Q psy2103         138 EWKCESSRLIFEAWAKLQKELLSQSG  163 (203)
Q Consensus       138 ~~~C~~C~~~f~~~~~l~~H~~~h~~  163 (203)
                      +|+|..|++.|.+...|.+|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            47899999999999999999998864

>KOG1146|consensus

Probab=97.57  E-value=5.2e-05  Score=68.94  Aligned_cols=135  Identities=17%  Similarity=0.262  Sum_probs=74.4

Q ss_pred             CCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCc-cccCCCCCcccCCCCccCCChH
Q psy2103          18 GERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKC-KVHTGEKPHHCDICDVGFSDKF   96 (203)
Q Consensus        18 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~-~~~~~~~~~~C~~C~~~f~~~~   96 (203)
                      ..+.|.|+.|+..|+....|..|||..+.+-.-  .+|-.+       ..|.....+ ..-.+.++|.|..|...++...
T Consensus       462 ~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~--~~c~~g-------q~~~~~arg~~~~~~~~p~~C~~C~~stttng  532 (1406)
T KOG1146|consen  462 FFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS--AYCKAG-------QNHPRLARGEVYRCPGKPYPCRACNYSTTTNG  532 (1406)
T ss_pred             ccccccCCccchhhhhHHHhhhcccccccccch--hHhHhc-------cccccccccccccCCCCcccceeeeeeeecch
Confidence            345677777777777777777777764433111  333211       111110000 1223456799999999999999


Q ss_pred             HHHHHHHHhhhhh------cCcc---------ccCCCCCCCCCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhhc
Q psy2103          97 ALKRHRLIHEKYA------RNST---------VNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQ  161 (203)
Q Consensus        97 ~L~~H~~~~~~~~------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  161 (203)
                      +|..|+...-...      ....         .........................|.|.+|++.-.-..+|+.||..-
T Consensus       533 ~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss  612 (1406)
T KOG1146|consen  533 NLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTAS  612 (1406)
T ss_pred             HHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccC
Confidence            9999976532110      0000         000111111111111111122346799999999999999999999763

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.36  E-value=0.0001  Score=41.44  Aligned_cols=32  Identities=28%  Similarity=0.577  Sum_probs=19.3

Q ss_pred             CCCceecccccccccChhhHHHHHHHhcCCCC
Q psy2103          18 GERPYQCEVCEKTFARHSTLWNHRRIHTGEKP   49 (203)
Q Consensus        18 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~   49 (203)
                      .+.|..|++|+..+....+|++|+...|+.++
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            45567788888888888888888777776554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.11  E-value=0.00026  Score=34.07  Aligned_cols=24  Identities=13%  Similarity=0.495  Sum_probs=21.8

Q ss_pred             cccchhhHhHHHHHHHHHHHhhcc
Q psy2103         139 WKCESSRLIFEAWAKLQKELLSQS  162 (203)
Q Consensus       139 ~~C~~C~~~f~~~~~l~~H~~~h~  162 (203)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999999764

>smart00355 ZnF_C2H2 zinc finger

Probab=97.10  E-value=0.00035  Score=33.62  Aligned_cols=24  Identities=42%  Similarity=0.754  Sum_probs=17.0

Q ss_pred             eecccccccccChhhHHHHHHHhc
Q psy2103          22 YQCEVCEKTFARHSTLWNHRRIHT   45 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~~h~   45 (203)
                      |.|..|++.|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            467777777777777777776553

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.07  E-value=0.00031  Score=33.88  Aligned_cols=22  Identities=32%  Similarity=0.883  Sum_probs=14.7

Q ss_pred             eecccccccccChhhHHHHHHH
Q psy2103          22 YQCEVCEKTFARHSTLWNHRRI   43 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~~   43 (203)
                      |.|.+|+..|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4567777777777777777653

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.00  E-value=0.0006  Score=32.54  Aligned_cols=23  Identities=30%  Similarity=0.612  Sum_probs=15.4

Q ss_pred             eecccccccccChhhHHHHHHHhc
Q psy2103          22 YQCEVCEKTFARHSTLWNHRRIHT   45 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~~h~   45 (203)
                      |.|+.|+.... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            57777777776 777777777665

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.00  E-value=0.00016  Score=34.89  Aligned_cols=23  Identities=22%  Similarity=0.394  Sum_probs=21.3

Q ss_pred             cccchhhHhHHHHHHHHHHHhhc
Q psy2103         139 WKCESSRLIFEAWAKLQKELLSQ  161 (203)
Q Consensus       139 ~~C~~C~~~f~~~~~l~~H~~~h  161 (203)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999864

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.89  E-value=0.00097  Score=31.78  Aligned_cols=23  Identities=39%  Similarity=0.522  Sum_probs=15.1

Q ss_pred             cccCCCCccCCChHHHHHHHHHhh
Q psy2103          83 HHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        83 ~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      |+|+.|++... ...|..|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777777776 777777777765

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.72  E-value=0.0016  Score=36.68  Aligned_cols=32  Identities=28%  Similarity=0.471  Sum_probs=20.7

Q ss_pred             CCCCCcccCCCCccCCChHHHHHHHHHhhhhh
Q psy2103          78 TGEKPHHCDICDVGFSDKFALKRHRLIHEKYA  109 (203)
Q Consensus        78 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~  109 (203)
                      ..+.+-.|++|+..+++..+|++|++..|+..
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            34567788888888888888888888877653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.65  E-value=0.0012  Score=47.46  Aligned_cols=36  Identities=31%  Similarity=0.750  Sum_probs=18.7

Q ss_pred             CeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCC
Q psy2103          49 PYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFS   93 (203)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~   93 (203)
                      +|.|. |+.   ....++.|.+     .+.+.++|.|..|+..|.
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~r-----i~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNR-----VVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHH-----HhcCCccEECCCCCceeE
Confidence            35554 554   4444555553     455555555555555544

>KOG4173|consensus

Probab=96.63  E-value=0.00057  Score=50.07  Aligned_cols=90  Identities=24%  Similarity=0.433  Sum_probs=71.1

Q ss_pred             Cceeccc--ccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCc-----cccCCCCCcccCC--CCc
Q psy2103          20 RPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKC-----KVHTGEKPHHCDI--CDV   90 (203)
Q Consensus        20 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~-----~~~~~~~~~~C~~--C~~   90 (203)
                      +.|.|++  |...|.+......|..+-++.   .|..|.+.|.+...|..|+..-|-     ...-|.-+|.|-.  |+.
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            4488998  889999999899887665654   699999999999999999974331     2234566799955  999


Q ss_pred             cCCChHHHHHHHHHhhhhhcCc
Q psy2103          91 GFSDKFALKRHRLIHEKYARNS  112 (203)
Q Consensus        91 ~f~~~~~L~~H~~~~~~~~~~~  112 (203)
                      .|.+...-..|+-..|..+.+.
T Consensus       155 KFkT~r~RkdH~I~~Hk~Pa~f  176 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMHKYPADF  176 (253)
T ss_pred             hhhhhhhhhhHHHHhccCCcce
Confidence            9999999999987777655444

>KOG2231|consensus

Probab=96.43  E-value=0.0036  Score=54.26  Aligned_cols=79  Identities=25%  Similarity=0.468  Sum_probs=51.4

Q ss_pred             eecccccccc---------------cChhhHHHHHHHhcCCCCeeCcchh---------hhccChhHHHhhhhcCCcccc
Q psy2103          22 YQCEVCEKTF---------------ARHSTLWNHRRIHTGEKPYRCSICG---------SAFNQATHLKNHAKVGKCKVH   77 (203)
Q Consensus        22 ~~C~~C~~~f---------------~~~~~L~~H~~~h~~~~~~~C~~C~---------~~f~~~~~l~~H~~~~~~~~~   77 (203)
                      +.|.+|+..|               .+...|+.||...|+.  +.|..|-         ...-+...|..|++..    -
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~~--~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~g----d  173 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHKL--HLCSLCLQNLKIFINERKLYTRAELNLHLMFG----D  173 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhhh--hccccccccceeeeeeeehehHHHHHHHHhcC----C
Confidence            5677777766               3778899998655442  4444443         2234566777787632    1


Q ss_pred             CCCC----CcccCCCCccCCChHHHHHHHHHhh
Q psy2103          78 TGEK----PHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        78 ~~~~----~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      .++.    --.|..|...|-....|.+|++.+|
T Consensus       174 ~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h  206 (669)
T KOG2231|consen  174 PDDESCRGHPLCKFCHERFLDDDELYRHLRFDH  206 (669)
T ss_pred             CccccccCCccchhhhhhhccHHHHHHhhccce
Confidence            1222    2578889999999999999988665

>KOG1146|consensus

Probab=96.41  E-value=0.0012  Score=60.54  Aligned_cols=102  Identities=13%  Similarity=0.159  Sum_probs=68.3

Q ss_pred             CcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCC
Q psy2103          52 CSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTH  131 (203)
Q Consensus        52 C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (203)
                      |..|+..+.+...+..|+..    .+.-.+.+.|+.|+..|+....|..|++..|.......+.....   .........
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~----L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~---~~~~arg~~  511 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVV----LHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQN---HPRLARGEV  511 (1406)
T ss_pred             ccchhhhhhhhcccccceee----eecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccc---ccccccccc
Confidence            44456666666666666652    45555889999999999999999999998765554422211111   111111111


Q ss_pred             CCCCCcccccchhhHhHHHHHHHHHHHhh
Q psy2103         132 SSSQLEEWKCESSRLIFEAWAKLQKELLS  160 (203)
Q Consensus       132 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  160 (203)
                      -.....+|.|..|...+....+|.+|+..
T Consensus       512 ~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  512 YRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            22235789999999999999999999866

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.36  E-value=0.00069  Score=33.37  Aligned_cols=20  Identities=30%  Similarity=0.798  Sum_probs=9.8

Q ss_pred             eecccccccccChhhHHHHH
Q psy2103          22 YQCEVCEKTFARHSTLWNHR   41 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~   41 (203)
                      |.|.+|++.|.+...|..|+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCT
T ss_pred             CCcccCCCCcCCHHHHHHHH
Confidence            34555555555555544444

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.05  E-value=0.003  Score=31.03  Aligned_cols=21  Identities=33%  Similarity=0.797  Sum_probs=16.6

Q ss_pred             eeCcchhhhccChhHHHhhhh
Q psy2103          50 YRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            568888888888888888875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=96.03  E-value=0.0081  Score=47.58  Aligned_cols=153  Identities=16%  Similarity=0.223  Sum_probs=89.8

Q ss_pred             hHHHHHHHHhCC-CCceeccccccccc-ChhhHHHHHHHhcCC----------------------CCeeCcchhhhccCh
Q psy2103           7 PHLKNHERIHSG-ERPYQCEVCEKTFA-RHSTLWNHRRIHTGE----------------------KPYRCSICGSAFNQA   62 (203)
Q Consensus         7 ~~l~~H~~~h~~-~~~~~C~~C~~~f~-~~~~L~~H~~~h~~~----------------------~~~~C~~C~~~f~~~   62 (203)
                      .+|+.+++.-.+ ...-+|-.|+..+. ..+..-.|+-.-|+-                      ..++|..|.+.|..+
T Consensus       129 eaLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdk  208 (423)
T KOG2482|consen  129 EALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDK  208 (423)
T ss_pred             HHHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCc
Confidence            456666655432 22356888876655 445566665433321                      127888888888888


Q ss_pred             hHHHhhhhcC-Cccc---------------------------c---------------------CCCCC--cccCCCCcc
Q psy2103          63 THLKNHAKVG-KCKV---------------------------H---------------------TGEKP--HHCDICDVG   91 (203)
Q Consensus        63 ~~l~~H~~~~-~~~~---------------------------~---------------------~~~~~--~~C~~C~~~   91 (203)
                      ..|+.||+.- |.+.                           +                     .+..+  .+|-.|...
T Consensus       209 ntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~  288 (423)
T KOG2482|consen  209 NTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNF  288 (423)
T ss_pred             HHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccc
Confidence            8888888631 1100                           0                     00112  589999999


Q ss_pred             CCChHHHHHHHHHhhhhhcCccccCC-CCCCCCCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhhc
Q psy2103          92 FSDKFALKRHRLIHEKYARNSTVNQS-HDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQ  161 (203)
Q Consensus        92 f~~~~~L~~H~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  161 (203)
                      +.+...|..||+.-|...-....... ...-......  ...-.......|..|+..|.....|..||.-+
T Consensus       289 ~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~Yqrvrvi--NyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  289 YENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVI--NYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             hhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHH--HHHHHHhhccccccccccccCcchhhhhcccc
Confidence            99999999999988865422211110 0000000000  00000123357999999999999999999764

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.92  E-value=0.012  Score=46.72  Aligned_cols=80  Identities=24%  Similarity=0.475  Sum_probs=55.8

Q ss_pred             ceeccc--ccccccChhhHHHHHHHhcCCCCeeCcchh---hhc------cChhHHHhhhhcCCccccCCCCC----ccc
Q psy2103          21 PYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICG---SAF------NQATHLKNHAKVGKCKVHTGEKP----HHC   85 (203)
Q Consensus        21 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~---~~f------~~~~~l~~H~~~~~~~~~~~~~~----~~C   85 (203)
                      .|.|+.  |..+......|..|.+..|+.  +.|.+|-   +.|      -++..|+.|..     .-..+..    -.|
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~-----~G~~e~GFKGHP~C  223 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKN-----GGLEEEGFKGHPLC  223 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeeccccccccc-----CCccccCcCCCchh
Confidence            377886  777777788899998877763  6787775   223      23455777764     2222222    379


Q ss_pred             CCCCccCCChHHHHHHHHHhhh
Q psy2103          86 DICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        86 ~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      ..|...|-..+.|..|++..|.
T Consensus       224 ~FC~~~FYdDDEL~~HcR~~HE  245 (493)
T COG5236         224 IFCKIYFYDDDELRRHCRLRHE  245 (493)
T ss_pred             hhccceecChHHHHHHHHhhhh
Confidence            9999999999999999877553

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.42  E-value=0.012  Score=28.32  Aligned_cols=20  Identities=25%  Similarity=0.707  Sum_probs=14.9

Q ss_pred             eecccccccccChhhHHHHHH
Q psy2103          22 YQCEVCEKTFARHSTLWNHRR   42 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~   42 (203)
                      .+|+.||+.| ....|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            4688888888 5667888865

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=95.39  E-value=0.047  Score=36.64  Aligned_cols=27  Identities=15%  Similarity=0.388  Sum_probs=24.3

Q ss_pred             ccccc----chhhHhHHHHHHHHHHHhhccC
Q psy2103         137 EEWKC----ESSRLIFEAWAKLQKELLSQSG  163 (203)
Q Consensus       137 ~~~~C----~~C~~~f~~~~~l~~H~~~h~~  163 (203)
                      .-|.|    ..|++.+.+...+..|.+.++|
T Consensus        79 ~G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   79 DGYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            44899    9999999999999999998775

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.05  E-value=0.04  Score=43.91  Aligned_cols=90  Identities=26%  Similarity=0.420  Sum_probs=64.4

Q ss_pred             hhHHHHHHHHhCCCCc----eecccccccccChhhHHHHHHHhcCCCCeeCcchh-------hhccChhHHHhhhhcCCc
Q psy2103           6 SPHLKNHERIHSGERP----YQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICG-------SAFNQATHLKNHAKVGKC   74 (203)
Q Consensus         6 ~~~l~~H~~~h~~~~~----~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~-------~~f~~~~~l~~H~~~~~~   74 (203)
                      ++.|+.|......+.-    -.|..|...|-+...|..|++..|.    .|-+|+       .-|++..+|..|.+.   
T Consensus       201 ~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~---  273 (493)
T COG5236         201 SSTLRDHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRN---  273 (493)
T ss_pred             cccccccccCCccccCcCCCchhhhccceecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhc---
Confidence            3567777765443312    2599999999999999999997765    366665       348999999999962   


Q ss_pred             cccCCCCCcccCC--CC----ccCCChHHHHHHHHHhhhh
Q psy2103          75 KVHTGEKPHHCDI--CD----VGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        75 ~~~~~~~~~~C~~--C~----~~f~~~~~L~~H~~~~~~~  108 (203)
                       .|     |.|..  |.    ..|.....|..|+..-|+.
T Consensus       274 -~h-----y~ct~qtc~~~k~~vf~~~~el~~h~~~~h~~  307 (493)
T COG5236         274 -AH-----YCCTFQTCRVGKCYVFPYHTELLEHLTRFHKV  307 (493)
T ss_pred             -Cc-----eEEEEEEEecCcEEEeccHHHHHHHHHHHhhc
Confidence             22     55543  32    4799999999998776643

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.85  E-value=0.0069  Score=50.02  Aligned_cols=143  Identities=22%  Similarity=0.327  Sum_probs=87.8

Q ss_pred             CceecccccccccChhhHHHHHH--HhcCC--CCeeCc--chhhhccChhHHHhhhhcCCccccCCCCCcccCC--CCcc
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRR--IHTGE--KPYRCS--ICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI--CDVG   91 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~--C~~~   91 (203)
                      .++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|..     .+.+...+.+..  +...
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  362 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHIL-----LHTSISPAKEKLLNSSSK  362 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcc-----cccCCCccccccccCccc
Confidence            46889999999999999999999  78888  899999  79999999999999986     677766666654  4444


Q ss_pred             CCChHHHHHHHHHhhh--hhcCcc-------ccCCCCCCCCCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhhcc
Q psy2103          92 FSDKFALKRHRLIHEK--YARNST-------VNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQS  162 (203)
Q Consensus        92 f~~~~~L~~H~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  162 (203)
                      +.....-..+......  ......       +.................-......+.+..|...|.....+..|++.+.
T Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (467)
T COG5048         363 FSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHT  442 (467)
T ss_pred             cccccCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccc
Confidence            4433321111111110  000000       0000000011111111122222346788999999999999999999886


Q ss_pred             CCCcc
Q psy2103         163 GYPYH  167 (203)
Q Consensus       163 ~~~~~  167 (203)
                      ....-
T Consensus       443 ~~~~~  447 (467)
T COG5048         443 NHAPL  447 (467)
T ss_pred             cCCce
Confidence            55433

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.59  E-value=0.014  Score=30.32  Aligned_cols=25  Identities=12%  Similarity=0.282  Sum_probs=22.0

Q ss_pred             cccccchhhHhHHHHHHHHHHHhhc
Q psy2103         137 EEWKCESSRLIFEAWAKLQKELLSQ  161 (203)
Q Consensus       137 ~~~~C~~C~~~f~~~~~l~~H~~~h  161 (203)
                      +.|.|+.|+..|.+...+..|+...
T Consensus         2 ~~~~C~~C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        2 GGFYCKLCNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             cCeEccccCCccCCHHHHHHHHChH
Confidence            4588999999999999999998763

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=94.56  E-value=0.029  Score=32.22  Aligned_cols=28  Identities=14%  Similarity=0.315  Sum_probs=24.2

Q ss_pred             CcccccchhhHhHHHHHHHHHHHhhccC
Q psy2103         136 LEEWKCESSRLIFEAWAKLQKELLSQSG  163 (203)
Q Consensus       136 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  163 (203)
                      ...++|+.||..|....++.+|...-++
T Consensus        15 E~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          15 EEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             ceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            4678999999999999999999876544

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.49  E-value=0.027  Score=29.21  Aligned_cols=22  Identities=23%  Similarity=0.616  Sum_probs=16.5

Q ss_pred             ceecccccccccChhhHHHHHH
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRR   42 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~   42 (203)
                      +|.|.+|+..|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4678888888887777777764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PRK04860 hypothetical protein; Provisional

Probab=94.49  E-value=0.022  Score=40.98  Aligned_cols=39  Identities=36%  Similarity=0.876  Sum_probs=33.8

Q ss_pred             ceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChh
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQAT   63 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~   63 (203)
                      +|.|. |+.   ....+.+|.++|.++++|.|..|+..|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            49998 987   6778999999999999999999998886543

>KOG2785|consensus

Probab=94.43  E-value=0.044  Score=44.20  Aligned_cols=62  Identities=11%  Similarity=0.081  Sum_probs=40.4

Q ss_pred             cccchhhHhHHHHHHHHHHHhhccCCCcccccccccc--chhhhhhhhccc-hhhhhh---hcccccc
Q psy2103         139 WKCESSRLIFEAWAKLQKELLSQSGYPYHKLQSWRLS--SEYRLDALCSIN-TIKLCR---KENQSVT  200 (203)
Q Consensus       139 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~--~~~~~d~~~~~~-~~~~c~---k~~~~~~  200 (203)
                      -.|=.|+..|.+...-..||-.++|....+.+=..+.  ...-+...+.+. .|=.|.   +.+.||.
T Consensus       167 t~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sle  234 (390)
T KOG2785|consen  167 TDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLE  234 (390)
T ss_pred             cceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccH
Confidence            5689999999999999999999999865553322222  223334444444 333466   6666653

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.36  E-value=0.049  Score=26.15  Aligned_cols=20  Identities=30%  Similarity=0.599  Sum_probs=12.5

Q ss_pred             cccCCCCccCCChHHHHHHHH
Q psy2103          83 HHCDICDVGFSDKFALKRHRL  103 (203)
Q Consensus        83 ~~C~~C~~~f~~~~~L~~H~~  103 (203)
                      ..|+.|++.| ..+.|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            4566777777 5556666654

>KOG2893|consensus

Probab=94.23  E-value=0.012  Score=44.34  Aligned_cols=46  Identities=28%  Similarity=0.554  Sum_probs=30.5

Q ss_pred             CcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHH-HHHhh
Q psy2103          52 CSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRH-RLIHE  106 (203)
Q Consensus        52 C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H-~~~~~  106 (203)
                      |=+|++.|.....|.+|++         .+-|+|.+|.+..-+--.|..| ++.|.
T Consensus        13 cwycnrefddekiliqhqk---------akhfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQK---------AKHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeecccccchhhhhhhhhh---------hccceeeeehhhhccCCCceeehhhhhh
Confidence            6667777777777777765         2447777777766666666666 45554

>KOG2482|consensus

Probab=94.12  E-value=0.032  Score=44.33  Aligned_cols=85  Identities=26%  Similarity=0.480  Sum_probs=65.2

Q ss_pred             eecccccccccChhhHHHHHHHhcC------------------------------------------------------C
Q psy2103          22 YQCEVCEKTFARHSTLWNHRRIHTG------------------------------------------------------E   47 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~~h~~------------------------------------------------------~   47 (203)
                      +.|-+|.+.|..+..|..||+....                                                      .
T Consensus       196 ~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a  275 (423)
T KOG2482|consen  196 LRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDA  275 (423)
T ss_pred             heeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCC
Confidence            7899999999999999999986411                                                      0


Q ss_pred             C--CeeCcchhhhccChhHHHhhhhcCCc----cccC------------------CCCCcccCCCCccCCChHHHHHHHH
Q psy2103          48 K--PYRCSICGSAFNQATHLKNHAKVGKC----KVHT------------------GEKPHHCDICDVGFSDKFALKRHRL  103 (203)
Q Consensus        48 ~--~~~C~~C~~~f~~~~~l~~H~~~~~~----~~~~------------------~~~~~~C~~C~~~f~~~~~L~~H~~  103 (203)
                      -  ..+|..|.....+...|..||+..|.    +...                  ....-.|-.|.-.|.....|..|+.
T Consensus       276 ~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  276 EALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             CccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcc
Confidence            0  15899999999999999999986552    0000                  1123478889999999999999987


Q ss_pred             Hhh
Q psy2103         104 IHE  106 (203)
Q Consensus       104 ~~~  106 (203)
                      .+.
T Consensus       356 e~k  358 (423)
T KOG2482|consen  356 EDK  358 (423)
T ss_pred             ccc
Confidence            653

>KOG4173|consensus

Probab=93.84  E-value=0.048  Score=40.27  Aligned_cols=88  Identities=16%  Similarity=0.407  Sum_probs=64.8

Q ss_pred             CeeCcc--hhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhh-hhcCccccCCCCCCCCCC
Q psy2103          49 PYRCSI--CGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEK-YARNSTVNQSHDSQTTPP  125 (203)
Q Consensus        49 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~-~~~~~~~~~~~~~~~~~~  125 (203)
                      .|.|++  |...|.+..++..|-.+    .|.    -.|..|.+.|.+...|..|+..-|. .-.....           
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~----~h~----~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~ve-----------  139 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHT----LHG----NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVE-----------  139 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhh----ccc----chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHH-----------
Confidence            377988  88999999988888752    232    4699999999999999999765443 2111110           


Q ss_pred             CCCCCCCCCCCccccc--chhhHhHHHHHHHHHHHhhccC
Q psy2103         126 QSTPTHSSSQLEEWKC--ESSRLIFEAWAKLQKELLSQSG  163 (203)
Q Consensus       126 ~~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~  163 (203)
                              ....+|.|  +.|+..|.....-..||-.-+.
T Consensus       140 --------RG~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  140 --------RGQDMYQCLVEGCTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             --------cCccHHHHHHHhhhhhhhhhhhhhhHHHHhcc
Confidence                    01367999  8899999999999999865444

>KOG2186|consensus

Probab=93.66  E-value=0.049  Score=41.51  Aligned_cols=47  Identities=26%  Similarity=0.588  Sum_probs=39.9

Q ss_pred             ceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhh
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      -|.|.+||...+-+ .+..||..-++ .-|.|..|+.+|.. .++..|.+
T Consensus         3 ~FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    3 FFTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             EEehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            48999999998854 58889988888 47999999999998 77888874

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=92.79  E-value=0.06  Score=30.93  Aligned_cols=33  Identities=21%  Similarity=0.325  Sum_probs=25.5

Q ss_pred             ccCCCCCcccCCCCccCCChHHHHHHHHHhhhh
Q psy2103          76 VHTGEKPHHCDICDVGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        76 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~  108 (203)
                      .-.|+..+.||-|+..|+......+|....|+.
T Consensus        11 ~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~~   43 (65)
T COG4049          11 DRDGEEFLRCPRCGMVFRRRKDYIRHVNKAHGW   43 (65)
T ss_pred             ccCCceeeeCCchhHHHHHhHHHHHHhhHHhhh
Confidence            456777788888888888888888887776654

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=92.02  E-value=0.09  Score=27.08  Aligned_cols=24  Identities=33%  Similarity=1.063  Sum_probs=15.5

Q ss_pred             eecccccccccChhhHHHHHHHhcCCCCeeCcchhh
Q psy2103          22 YQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGS   57 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~   57 (203)
                      |.|.+||..+....            .++.|+.|+.
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCC
Confidence            67777777665433            3567777764

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2231|consensus

Probab=91.68  E-value=0.33  Score=42.55  Aligned_cols=93  Identities=22%  Similarity=0.374  Sum_probs=53.7

Q ss_pred             CCChhHHHHHHHHhCCCCceecccccc---------cccChhhHHHHHHHhcC-C----CCeeCcchhhhccChhHHHhh
Q psy2103           3 FSQSPHLKNHERIHSGERPYQCEVCEK---------TFARHSTLWNHRRIHTG-E----KPYRCSICGSAFNQATHLKNH   68 (203)
Q Consensus         3 F~~~~~l~~H~~~h~~~~~~~C~~C~~---------~f~~~~~L~~H~~~h~~-~----~~~~C~~C~~~f~~~~~l~~H   68 (203)
                      |.+...|+.||..-|  +.+.|.+|-.         ..-+...|.+|+..--. +    ..-.|..|...|.....|..|
T Consensus       124 ~~s~~~Lk~H~~~~H--~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH  201 (669)
T KOG2231|consen  124 FKSVENLKNHMRDQH--KLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRH  201 (669)
T ss_pred             hhHHHHHHHHHHHhh--hhhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHh
Confidence            445677888885433  2355665542         22245667777654321 1    124688888888888888888


Q ss_pred             hhcCCccccCCCCCcccCCC------CccCCChHHHHHHHHHhh
Q psy2103          69 AKVGKCKVHTGEKPHHCDIC------DVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        69 ~~~~~~~~~~~~~~~~C~~C------~~~f~~~~~L~~H~~~~~  106 (203)
                      ++.+|         |.|..|      ...|.....|..|.+.+|
T Consensus       202 ~~~~h---------~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  202 LRFDH---------EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             hccce---------eheeecCcccccchhcccchHHHHHhhhcC
Confidence            86322         333333      345566666666655544

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=91.17  E-value=0.35  Score=32.35  Aligned_cols=87  Identities=15%  Similarity=0.075  Sum_probs=48.1

Q ss_pred             CceecccccccccChhhHHHHHHHhcCCC-CeeCcchhhhccChhHHHhhhhcCCcc--------ccCCCCCccc----C
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGEK-PYRCSICGSAFNQATHLKNHAKVGKCK--------VHTGEKPHHC----D   86 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~~C~~C~~~f~~~~~l~~H~~~~~~~--------~~~~~~~~~C----~   86 (203)
                      +...|..|...... .++..|++..+... ...-..=...+.....|..-...--..        --.....|.|    .
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~~   88 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDPP   88 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCCC
Confidence            34679999987776 88999998554321 111111111111111111100000000        0011134899    9


Q ss_pred             CCCccCCChHHHHHHHHHhhh
Q psy2103          87 ICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        87 ~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      .|++.+.+...|++|++.+|+
T Consensus        89 ~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   89 HCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCCcEeccHHHHHHHHHHhcC
Confidence            999999999999999998874

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2893|consensus

Probab=89.91  E-value=0.11  Score=39.32  Aligned_cols=45  Identities=24%  Similarity=0.558  Sum_probs=36.7

Q ss_pred             ecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhc
Q psy2103          23 QCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKV   71 (203)
Q Consensus        23 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   71 (203)
                      .|.+|++.|....-|.+|++.    +.|+|.+|-+..-+--.|..|-.+
T Consensus        12 wcwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmq   56 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQ   56 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhh
Confidence            699999999999999999874    459999999876666667777543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.69  E-value=0.059  Score=44.46  Aligned_cols=53  Identities=40%  Similarity=0.713  Sum_probs=45.4

Q ss_pred             CCCChhHHHHHHH--HhCCC--Cceecc--cccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103           2 LFSQSPHLKNHER--IHSGE--RPYQCE--VCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus         2 ~F~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      .|.....|.+|..  .|.++  +++.|+  .|++.|.....+..|...|.+..++.+..
T Consensus       298 ~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (467)
T COG5048         298 SFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKL  356 (467)
T ss_pred             CccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccccc
Confidence            4677788999999  79999  999999  79999999999999999998876555544

>KOG4167|consensus

Probab=88.87  E-value=0.47  Score=41.72  Aligned_cols=30  Identities=7%  Similarity=0.108  Sum_probs=26.5

Q ss_pred             CcccccchhhHhHHHHHHHHHHHhhccCCC
Q psy2103         136 LEEWKCESSRLIFEAWAKLQKELLSQSGYP  165 (203)
Q Consensus       136 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  165 (203)
                      .+.|.|..|+++|..-.+++.||++|.-..
T Consensus       790 ~giFpCreC~kvF~KiKSrNAHMK~Hr~q~  819 (907)
T KOG4167|consen  790 TGIFPCRECGKVFFKIKSRNAHMKTHRQQE  819 (907)
T ss_pred             CceeehHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            467999999999999999999999996443

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=88.20  E-value=0.34  Score=25.62  Aligned_cols=12  Identities=25%  Similarity=0.631  Sum_probs=6.3

Q ss_pred             CCcccCCCCccC
Q psy2103          81 KPHHCDICDVGF   92 (203)
Q Consensus        81 ~~~~C~~C~~~f   92 (203)
                      ...+|+.|+..|
T Consensus        24 ~~vrC~~C~~~f   35 (37)
T PF13719_consen   24 RKVRCPKCGHVF   35 (37)
T ss_pred             cEEECCCCCcEe
Confidence            345555555544

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=88.15  E-value=0.33  Score=32.49  Aligned_cols=30  Identities=27%  Similarity=0.717  Sum_probs=23.2

Q ss_pred             eeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCCh
Q psy2103          50 YRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDK   95 (203)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~   95 (203)
                      ..|+.||..|.                -.+..|..|+.||..|...
T Consensus        10 R~Cp~CG~kFY----------------DLnk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFY----------------DLNKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhc----------------cCCCCCccCCCCCCccCcc
Confidence            57999999883                2334678899999998866

The function of members of this family is unknown.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=87.69  E-value=0.43  Score=25.05  Aligned_cols=12  Identities=25%  Similarity=0.664  Sum_probs=6.2

Q ss_pred             CCcccCCCCccC
Q psy2103          81 KPHHCDICDVGF   92 (203)
Q Consensus        81 ~~~~C~~C~~~f   92 (203)
                      ...+|+.|+..|
T Consensus        24 ~~v~C~~C~~~f   35 (36)
T PF13717_consen   24 RKVRCSKCGHVF   35 (36)
T ss_pred             cEEECCCCCCEe
Confidence            345555555544

>KOG2785|consensus

Probab=87.29  E-value=0.55  Score=38.12  Aligned_cols=51  Identities=20%  Similarity=0.418  Sum_probs=41.3

Q ss_pred             CceecccccccccChhhHHHHHHHhcCC-----------------------CCeeCcchh---hhccChhHHHhhhh
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGE-----------------------KPYRCSICG---SAFNQATHLKNHAK   70 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~   70 (203)
                      .|-.|-.|+..+++...-..||..+|+-                       ..+.|..|+   +.|.+..+.+.||.
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~  241 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMR  241 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHh
Confidence            3567999999999999999999998873                       236777777   77888888888875

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=86.00  E-value=0.82  Score=32.84  Aligned_cols=30  Identities=17%  Similarity=0.396  Sum_probs=16.4

Q ss_pred             CceecccccccccChhhHHHHHHHhcCCCCeeCcchhhh
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSA   58 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~   58 (203)
                      .-|.|+.|+.+|+...++.         ..|.|+.||..
T Consensus       108 ~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~  137 (158)
T TIGR00373       108 MFFICPNMCVRFTFNEAME---------LNFTCPRCGAM  137 (158)
T ss_pred             CeEECCCCCcEeeHHHHHH---------cCCcCCCCCCE
Confidence            3466666666666555543         13566666643

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=85.87  E-value=0.16  Score=38.44  Aligned_cols=17  Identities=29%  Similarity=0.720  Sum_probs=10.7

Q ss_pred             CceecccccccccChhh
Q psy2103          20 RPYQCEVCEKTFARHST   36 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~   36 (203)
                      +.+.|++|+..|.+..-
T Consensus         4 k~~~CPvC~~~F~~~~v   20 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKV   20 (214)
T ss_pred             CceECCCCCCeeeeeEE
Confidence            44667777777766543

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=85.71  E-value=0.5  Score=24.97  Aligned_cols=12  Identities=33%  Similarity=0.783  Sum_probs=5.5

Q ss_pred             ecccccccccCh
Q psy2103          23 QCEVCEKTFARH   34 (203)
Q Consensus        23 ~C~~C~~~f~~~   34 (203)
                      .|+.|+..|.-.
T Consensus         4 ~CP~C~~~~~v~   15 (38)
T TIGR02098         4 QCPNCKTSFRVV   15 (38)
T ss_pred             ECCCCCCEEEeC
Confidence            444454444433

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=84.05  E-value=0.72  Score=33.30  Aligned_cols=25  Identities=44%  Similarity=1.112  Sum_probs=20.0

Q ss_pred             CCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCc
Q psy2103          48 KPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDV   90 (203)
Q Consensus        48 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~   90 (203)
                      +.|+|++||+.                  +.++.|-+||+|+-
T Consensus       133 ~~~vC~vCGy~------------------~~ge~P~~CPiCga  157 (166)
T COG1592         133 KVWVCPVCGYT------------------HEGEAPEVCPICGA  157 (166)
T ss_pred             CEEEcCCCCCc------------------ccCCCCCcCCCCCC
Confidence            36999999874                  44578899999984

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=83.94  E-value=0.57  Score=24.27  Aligned_cols=25  Identities=32%  Similarity=0.866  Sum_probs=15.5

Q ss_pred             ceecccccccccChhhHHHHHHHhcCCCCeeCcchhh
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGS   57 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~   57 (203)
                      .|.|.+||..+....            .|..|++|+.
T Consensus         2 ~~~C~~CG~i~~g~~------------~p~~CP~Cg~   26 (34)
T cd00729           2 VWVCPVCGYIHEGEE------------APEKCPICGA   26 (34)
T ss_pred             eEECCCCCCEeECCc------------CCCcCcCCCC
Confidence            367778876655432            2457777774

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=83.91  E-value=0.44  Score=36.08  Aligned_cols=48  Identities=19%  Similarity=0.385  Sum_probs=30.9

Q ss_pred             CCeeCcchhhhccChhHHHhhhhcCCc-----cccCCCC-----CcccCCCCccCCCh
Q psy2103          48 KPYRCSICGSAFNQATHLKNHAKVGKC-----KVHTGEK-----PHHCDICDVGFSDK   95 (203)
Q Consensus        48 ~~~~C~~C~~~f~~~~~l~~H~~~~~~-----~~~~~~~-----~~~C~~C~~~f~~~   95 (203)
                      +.+.|++|+..|.+..-+....+.-..     ..-.+..     ...||.||+.+...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            568999999999988766655532110     0011122     24999999988755

>smart00531 TFIIE Transcription initiation factor IIE

Probab=82.83  E-value=1.8  Score=30.66  Aligned_cols=12  Identities=33%  Similarity=0.955  Sum_probs=5.9

Q ss_pred             CeeCcchhhhcc
Q psy2103          49 PYRCSICGSAFN   60 (203)
Q Consensus        49 ~~~C~~C~~~f~   60 (203)
                      .|.|+.|+..|.
T Consensus        99 ~Y~Cp~C~~~y~  110 (147)
T smart00531       99 YYKCPNCQSKYT  110 (147)
T ss_pred             EEECcCCCCEee
Confidence            355555554444

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=82.16  E-value=1.1  Score=31.08  Aligned_cols=23  Identities=39%  Similarity=0.621  Sum_probs=16.6

Q ss_pred             eecccccccccChhhHHHHHHHhcCC
Q psy2103          22 YQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      ..|-+||+.|+.   |.+|++.|+|-
T Consensus        73 i~clecGk~~k~---LkrHL~~~~gl   95 (132)
T PF05443_consen   73 IICLECGKKFKT---LKRHLRTHHGL   95 (132)
T ss_dssp             EE-TBT--EESB---HHHHHHHTT-S
T ss_pred             eEEccCCcccch---HHHHHHHccCC
Confidence            789999999997   68999999874

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>KOG0717|consensus

Probab=81.66  E-value=3.3  Score=34.76  Aligned_cols=27  Identities=22%  Similarity=0.268  Sum_probs=22.4

Q ss_pred             ccccchhhHhHHHHHHHHHHHhh-ccCC
Q psy2103         138 EWKCESSRLIFEAWAKLQKELLS-QSGY  164 (203)
Q Consensus       138 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~  164 (203)
                      ...|..|+.+|.+...|-.|+.. -|+.
T Consensus       460 ~~~C~tCr~~FdSRnkLF~Hlk~tgHa~  487 (508)
T KOG0717|consen  460 LISCTTCRESFDSRNKLFAHLKKTGHAR  487 (508)
T ss_pred             hHhhhhhhhhccchhHHHHHhhhcCCee
Confidence            36799999999999999999865 3444

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=81.38  E-value=1.3  Score=32.49  Aligned_cols=16  Identities=19%  Similarity=0.389  Sum_probs=7.7

Q ss_pred             CeeCcchhhhccChhH
Q psy2103          49 PYRCSICGSAFNQATH   64 (203)
Q Consensus        49 ~~~C~~C~~~f~~~~~   64 (203)
                      .|.|+.|+..|+...+
T Consensus       117 ~Y~Cp~C~~rytf~eA  132 (178)
T PRK06266        117 FFFCPNCHIRFTFDEA  132 (178)
T ss_pred             EEECCCCCcEEeHHHH
Confidence            4555555544444443

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=81.27  E-value=1.4  Score=24.11  Aligned_cols=26  Identities=27%  Similarity=0.365  Sum_probs=13.7

Q ss_pred             CCCCcccCCCCccCCCh----HHHHHHHHH
Q psy2103          79 GEKPHHCDICDVGFSDK----FALKRHRLI  104 (203)
Q Consensus        79 ~~~~~~C~~C~~~f~~~----~~L~~H~~~  104 (203)
                      +.....|..|++.+...    ..|.+|++.
T Consensus        13 ~~~~a~C~~C~~~~~~~~~~ts~l~~HL~~   42 (45)
T PF02892_consen   13 DKKKAKCKYCGKVIKYSSGGTSNLKRHLKK   42 (45)
T ss_dssp             CSS-EEETTTTEE-----SSTHHHHHHHHH
T ss_pred             CcCeEEeCCCCeEEeeCCCcHHHHHHhhhh
Confidence            34556777777766654    677777743

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=81.09  E-value=1.2  Score=24.49  Aligned_cols=27  Identities=26%  Similarity=0.600  Sum_probs=17.2

Q ss_pred             ceecccccccccChhhHHHHHHHhcCCCCeeCcchhhh
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSA   58 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~   58 (203)
                      .|.|..||..|...           ...+.+|+.||..
T Consensus         2 ~Y~C~~Cg~~~~~~-----------~~~~irC~~CG~r   28 (44)
T smart00659        2 IYICGECGRENEIK-----------SKDVVRCRECGYR   28 (44)
T ss_pred             EEECCCCCCEeecC-----------CCCceECCCCCce
Confidence            37788888776643           1235778877754

present in RNA polymerase I, II and III

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=80.15  E-value=0.71  Score=25.62  Aligned_cols=29  Identities=24%  Similarity=0.576  Sum_probs=18.2

Q ss_pred             ceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhc
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAF   59 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f   59 (203)
                      .|.|+.||..|.......          .+.|+.||..+
T Consensus         3 ~y~C~~CG~~~~~~~~~~----------~~~Cp~CG~~~   31 (46)
T PRK00398          3 EYKCARCGREVELDEYGT----------GVRCPYCGYRI   31 (46)
T ss_pred             EEECCCCCCEEEECCCCC----------ceECCCCCCeE
Confidence            477888887776543211          46788887544

>PF00301 Rubredoxin: Rubredoxin; InterPro: IPR004039 Rubredoxin is a low molecular weight iron-containing bacterial protein involved in electron transfer [, ], sometimes replacing ferredoxin as an electron carrier []

Probab=80.05  E-value=0.91  Score=25.45  Aligned_cols=14  Identities=29%  Similarity=1.137  Sum_probs=7.4

Q ss_pred             eeCcchhhhccChh
Q psy2103          50 YRCSICGSAFNQAT   63 (203)
Q Consensus        50 ~~C~~C~~~f~~~~   63 (203)
                      |+|..|++.+....
T Consensus         2 y~C~~CgyvYd~~~   15 (47)
T PF00301_consen    2 YQCPVCGYVYDPEK   15 (47)
T ss_dssp             EEETTTSBEEETTT
T ss_pred             cCCCCCCEEEcCCc
Confidence            45556665554443

The 3-D structures of a number of rubredoxins have been solved [, ]. The fold belongs to the alpha+beta class, with 2 alpha-helices and 2-3 beta-strands. Its active site contains an iron ion which is co-ordinated by the sulphurs of four conserved cysteine residues forming an almost regular tetrahedron. The conserved cysteines reside on two loops, which are the most conserved regions of the protein. In addition, a ring of acidic residues in the proximity of the [Fe(Cys)4] centre is also well-conserved []. ; GO: 0009055 electron carrier activity, 0046872 metal ion binding; PDB: 2RDV_C 1RDV_A 1S24_A 1T9O_B 1B2J_A 1SMW_A 2PVE_B 1BFY_A 1T9P_C 1C09_C ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	203
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-20
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		6e-17
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-15
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-15
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		3e-15
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		4e-15
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		5e-15
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		5e-15
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		5e-15
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-15
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-14
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		8e-14
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		5e-13
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-12
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		4e-12
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		5e-12
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		5e-04
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-11
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		3e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-11
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		6e-11
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-10
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-10
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		9e-10
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		9e-10
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-09
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-09
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		1e-08
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-06
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		1e-08
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-08
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		4e-08
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		4e-07
2enh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-06
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		8e-06
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		9e-06
2ena_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-05
2ep0_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-05
2ytp_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-05
2emh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-05
2yta_A	41	Solution Structure Of C2h2 Type Zinc Finger Domain		4e-05
2yrj_A	46	Solution Structure Of The C2h2-Type Zinc Finger Dom		5e-05
2ep2_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-05
2eor_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-05
2yth_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-05
2ytr_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-05
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		8e-05
2eoe_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-05
2ytk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-05
2ytk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2en1_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2ep3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2en6_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2epz_A	46	Solution Structure Of The 4th C2h2 Type Zinc Finger		1e-04
2eq2_A	46	Solution Structure Of The 16th C2h2 Type Zinc Finge		1e-04
2emw_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2em3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2em3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2emj_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2emk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2eq1_A	46	Solution Structure Of The 9th C2h2 Type Zinc Finger		2e-04
2ysv_A	42	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-04
2eoi_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2yti_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2eme_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		2e-04
2ytd_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2enf_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2yts_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2yu8_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2eml_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2em6_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2em6_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		3e-04
2ene_A	46	Solution Structure Of The C2h2 Type Zinc Finger (re		4e-04
2ep1_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2yrh_A	44	Solution Structure Of The C2h2-Type Zinc Finger Dom		4e-04
2ema_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2emm_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2emp_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2eq3_A	46	Solution Structure Of The 17th C2h2 Type Zinc Finge		6e-04
2ytn_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2eq0_A	46	Solution Structure Of The 8th C2h2 Type Zinc Finger		6e-04
2eqw_A	42	Solution Structure Of The 6th C2h2 Type Zinc Finger		8e-04
2em1_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2ytg_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04
2em4_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/103 (44%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           FS+S HL  H+R H+GE+PY+C  C K+F+    L  H+R HTGEKPY+C  CG +F+Q 
Sbjct: 31  FSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQR 90
Query: 63  THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
            +L+ H      + HTGEKP+ C  C   FS    L+ H+  H
Sbjct: 91  ANLRAHQ-----RTHTGEKPYACPECGKSFSQLAHLRAHQRTH 128

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 84.0 bits (206), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
Query: 19  ERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHT 78
           E+PY+C  C K+F++ S L  H+R HTGEKPY+C  CG +F+Q++ L+ H      + HT
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQ-----RTHT 56
Query: 79  GEKPHHCDICDVGFSDKFALKRHRLIHE 106
           GEKP+ C  C   FS    L RH+  H+
Sbjct: 57  GEKPYKCPECGKSFSRSDHLSRHQRTHQ 84

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 19  ERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKV 76
           ERPY C V  C++ F+R + L  H RIHTG+KP++C IC   F+++ HL  H      + 
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-----RT 56
Query: 77  HTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           HTGEKP  CDIC   F+     KRH  IH
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 19  ERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKV 76
           ERPY C V  C++ F+R + L  H RIHTG+KP++C IC   F+++ HL  H      + 
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-----RT 56
Query: 77  HTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           HTGEKP  CDIC   F+     KRH  IH
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 19  ERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKV 76
           ERPY C V  C++ F+R   L  H RIHTG+KP++C IC   F+++ HL  H      + 
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-----RT 56
Query: 77  HTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           HTGEKP  CDIC   F+     KRH  IH
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 77.8 bits (190), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 19  ERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKV 76
           ERPY C V  C++ F+R   L  H RIHTG+KP++C IC   F+++ HL  H      + 
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-----RT 55
Query: 77  HTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           HTGEKP  CDIC   F+     KRH  IH
Sbjct: 56  HTGEKPFACDICGRKFARSDERKRHTKIH 84

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 77.4 bits (189), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 58/102 (56%), Gaps = 9/102 (8%)
Query: 8   HLKNHERIHSGERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHL 65
           HL+ H R H+GE+PYQC+   CE+ F+R   L  H+R HTG KP++C  C   F+++ HL
Sbjct: 23  HLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL 82
Query: 66  KNHAKVGKCKVHTGEKPHHC--DICDVGFSDKFALKRHRLIH 105
           K H      + HTGEKP  C    C   F+    L RH  +H
Sbjct: 83  KTHT-----RTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 77.4 bits (189), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 19  ERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKV 76
           ERPY C V  C++ F+  S L  H RIHTG+KP++C IC   F+++ HL  H      + 
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-----RT 56
Query: 77  HTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           HTGEKP  CDIC   F+     KRH  IH
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 77.4 bits (189), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 19  ERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKV 76
           ERPY C V  C++ F+R   L  H RIHTG+KP++C IC   F+++ HL  H      + 
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-----RT 56
Query: 77  HTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           HTGEKP  CDIC   F+     KRH  IH
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 19  ERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKV 76
           ERPY C V  C++ F++  +L  H RIHTG+KP++C IC   F+++ HL  H      + 
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-----RT 56
Query: 77  HTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           HTGEKP  CDIC   F+     KRH  IH
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 74.3 bits (181), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 19  ERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKV 76
           ERPY C V  C++ F++ + L  H RIHTG+KP++C IC   F+Q T L  H      + 
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHI-----RT 56
Query: 77  HTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           HTGEKP  CDIC   F+      RH  IH
Sbjct: 57  HTGEKPFACDICGRKFATLHTRDRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 19  ERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKV 76
           ERPY C V  C++ F++ + L  H RIHTG+KP++C IC   F+Q   L  H      + 
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHI-----RT 56
Query: 77  HTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           HTGEKP  CDIC   F+      RH  IH
Sbjct: 57  HTGEKPFACDICGRKFATLHTRTRHTKIH 85

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHT 78
          ++PY+C+ C+ +F     L +H+ +HTGEKPYRC+ICG+ FN+  +LK H      ++H+
Sbjct: 15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT-----RIHS 69
Query: 79 GEKP 82
          GEKP
Sbjct: 70 GEKP 73

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 2  LFSQSPHLKNHERIHSGERPYQC--EVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAF 59
          ++++S HLK H R H+GE+PY+C  E C+  FAR   L  H R HTG KP++C +C  +F
Sbjct: 26 VYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSF 85
Query: 60 NQATHLKNHAK 70
          +++ HL  H K
Sbjct: 86 SRSDHLALHMK 96

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
          F +S  L  H  IHS  RPY C+ C K F + S +  H  IHTGEKP++C +CG AF+Q+
Sbjct: 11 FKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQS 70
Query: 63 THLKNHAK 70
          ++L  H++
Sbjct: 71 SNLITHSR 78

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 42/66 (63%)
Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
          F++S +L  HER H+ ERPY C++C K F R   L +HR IH+ EKP++C  CG  F Q+
Sbjct: 27 FTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQS 86
Query: 63 THLKNH 68
            L  H
Sbjct: 87 RTLAVH 92

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 47  EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHE 106
           +K + C  CG  F ++ +L  H +      HT E+P+ CDIC   F  +  L+ HR IH 
Sbjct: 15  KKEFICKFCGRHFTKSYNLLIHERT-----HTDERPYTCDICHKAFRRQDHLRDHRYIHS 69
Query: 107 K 107
           K
Sbjct: 70  K 70

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKV 71
          E+PY C  C K F+R S L  H+R+HTGEKPY+C  CG AF+Q + L NH ++
Sbjct: 12 EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 47  EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           EKPY C  CG AF++++ L  H +V     HTGEKP+ C  C   FS    L  H+ IH
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRV-----HTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
Query: 20 RPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTG 79
          R Y+C+ C K+F+  S L  HRR HTGEKPY+C  CG AF Q +HL     +G  +VHTG
Sbjct: 17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL-----IGHHRVHTG 71
Query: 80 EKP 82
            P
Sbjct: 72 SGP 74

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 2   LFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI--CGSAF 59
           +F  +  ++ H   H G R + C  C K F   S L  H+ +HTGEKP++C+   CG  F
Sbjct: 16  MFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRF 74
Query: 60  NQATHLKNHAKVGKCKVHTGEKPHHC--DICDVGFSDKFALKRHRLIHEKYARN 111
           +   +L+ H      ++HTG++P+ C  D C+  F+    LK H L H K   N
Sbjct: 75  SLDFNLRTHV-----RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 3  FSQSPHLKNHERIHSGERPYQCE--VCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
          +++S HLK H R H+GE+PY C+   C   FAR   L  H R HTG +P++C  C  AF+
Sbjct: 17 YTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFS 76
Query: 61 QATHLKNHAK 70
          ++ HL  H K
Sbjct: 77 RSDHLALHMK 86

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 3  FSQSPHLKNHERIHSGERPYQCE--VCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
          +++S HLK H R H+GE+PY C+   C   FAR   L  H R HTG +P++C  C  AF+
Sbjct: 18 YTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFS 77
Query: 61 QATHLKNHAK 70
          ++ HL  H K
Sbjct: 78 RSDHLALHMK 87

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 60.1 bits (144), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 2  LFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE--KPYRCSICGSAF 59
          +F    HL  H+  HSGE+PY C VC   F R   +  H R H G   KPY C  CG  F
Sbjct: 16 IFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGF 75
Query: 60 NQATHLKNHAKVGKCKVHTG 79
          ++  HL  H K    +VH+G
Sbjct: 76 SRPDHLNGHIK----QVHSG 91

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
          FS+   LK H R H+G +PY+C+ C+   A  S+L  H RIH+ E+P++C IC  A   +
Sbjct: 18 FSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNS 77
Query: 63 THLKNHAKVGKCKVHTGE 80
          + L  H      + HTG+
Sbjct: 78 SQLTVHL-----RSHTGD 90

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 12  HERIHSGERPYQC--EVCEKTFARHSTLWNHRRIHTGEKPYRC--SICGSAFNQATHLKN 67
           H R H+GE+P++C  E C K+++R   L  H R HTGEKPY C    C  AF+ A+    
Sbjct: 58  HMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAK 117
Query: 68  HAKVGKCKVHTGEKPHHCDI--CDVGFSDKFALKRH 101
           H      + H+ EKP+ C +  C   ++D  +L++H
Sbjct: 118 HQN----RTHSNEKPYVCKLPGCTKRYTDPSSLRKH 149

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 17  SGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKV 76
           SG++ Y C+ C K+F   S    H  +H G +PY C +CG  F    HL     VG  K+
Sbjct: 6   SGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHL-----VGHMKI 59
Query: 77  HTGEKPHHCDICDVGFSDKFALKRH 101
           HTG KP+ C+IC   F  + +  RH
Sbjct: 60  HTGIKPYECNICAKRFMWRDSFHRH 84

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 20 RPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKV 71
          +P+QC +C + F+R   L  H R HTGEKP+ C ICG  F ++   K H  +
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI 53

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 48  KPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLI 104
           KP++C IC   F+++ HL  H +      HTGEKP  CDIC   F+     KRHR I
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRT-----HTGEKPFACDICGRKFARSDERKRHRDI 53

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 9   LKNHERIHSGERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSI--CGSAFNQATH 64
           L NH R+H+GE+P+ C    C K FAR   L  H+R HTGEKP++C    C   F  ++ 
Sbjct: 78  LVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSD 137
Query: 65  LKNHAKV 71
            K H  V
Sbjct: 138 RKKHMHV 144

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 8   HLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRR---IHTGEKPYRCSICGSAFNQATH 64
           +LK H R H+GE+P++C  C K + R   L  H     ++  E+ + CS+C   F +   
Sbjct: 22  YLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME 81
Query: 65  LKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRL 103
           L+ H        HTGE P+ C  C   F  K  L+ H +
Sbjct: 82  LRLHM-----VSHTGEMPYKCSSCSQQFMQKKDLQSHMI 115

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 20 RPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKV 71
          RPY C V  C++ F+R   L  H RIHTG+KP++C IC   F+++ HL  H + 
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 22 YQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTG 79
          + CEVC + FAR   L  H R HT EKPY C +C  AF +   L  HA+    K+H+G
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ----KIHSG 56

>pdb|2ENH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 556- 588) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 26/31 (83%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C+VC K F+ H++L  H+R+H+GEKP
Sbjct: 10 EKPYECDVCRKAFSHHASLTQHQRVHSGEKP 40

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 8  HLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKN 67
          H  ++E I  G   Y C VC++++   ++L  H  IH+ EK Y C  C   F  A +   
Sbjct: 9  HDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTK 68
Query: 68 HAKVGKCKVHTGEKPHHCDICDVGF 92
          H        HTGE+ + C  C   F
Sbjct: 69 HE-----IHHTGERRYQCLACGKSF 88

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKV 71
          ERP+ C  C KT+   S L  HRR H G +P  C  CG  F   + +  H KV
Sbjct: 2  ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKV 54

>pdb|2ENA|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 311- 343) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+P++C+ C+K+F + S L +HR IHTGEKP
Sbjct: 10 EKPFRCDTCDKSFRQRSALNSHRMIHTGEKP 40

>pdb|2EP0|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 528- 560) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C+VC K+F   S+L  H+RIHTGEKP
Sbjct: 10 EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP 40

>pdb|2YTP|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 687- 719) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 23/31 (74%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          ER Y+C  C K FAR STL  H+RIHTGEKP
Sbjct: 10 ERHYECSECGKAFARKSTLIMHQRIHTGEKP 40

>pdb|2EMH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 491- 523) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 21/31 (67%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          ERPY C VC K F   S L  H++IHTGEKP
Sbjct: 10 ERPYICTVCGKAFTDRSNLIKHQKIHTGEKP 40

>pdb|2YTA|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 3 In Zinc Finger Protein 32 Length = 41

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 17 SGERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          SGE+PYQC+ C K+F++  +L  H R+HTG  P
Sbjct: 6  SGEKPYQCKECGKSFSQRGSLAVHERLHTGSGP 38

>pdb|2YRJ|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (781- 813) From Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C  C K FA+ + L  H+RIHTGEKP
Sbjct: 10 EKPYRCGECGKAFAQKANLTQHQRIHTGEKP 40

>pdb|2EP2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 603- 635) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C +C K+F + S L  H++IHTGEKP
Sbjct: 10 EKPYECSICGKSFTKKSQLHVHQQIHTGEKP 40

>pdb|2EOR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 255- 287) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 21/31 (67%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY CE C K F   S L  H+RIHTGEKP
Sbjct: 10 EKPYNCEECGKAFIHDSQLQEHQRIHTGEKP 40

>pdb|2YTH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 479- 511) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+P+QCE C K F ++S L +H+R+HTGEKP
Sbjct: 10 EKPFQCEECGKRFTQNSHLHSHQRVHTGEKP 40

>pdb|2YTR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 760- 792) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C  C K F++ S L  H+RIHTGEKP
Sbjct: 10 EKPYKCNECGKAFSQTSKLARHQRIHTGEKP 40

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 3  FSQSPHLKNHERIHSGERPYQC--EVCEKTFARHSTLWNHRRIH 44
          + +S HLK H R H+GE+P+ C  + CE+ FAR   L  HRR H
Sbjct: 29 YFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2EOE|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 508- 540) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C  C K F ++S L NH+RIHTG KP
Sbjct: 10 EKPYKCNECGKVFTQNSHLANHQRIHTGVKP 40

>pdb|2YTK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 396- 428) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C  C K F ++S L NH RIHTGEKP
Sbjct: 10 EKPYKCNECGKVFTQNSHLTNHWRIHTGEKP 40

>pdb|2YTK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 396- 428) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 5/36 (13%)
Query: 47 EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKP 82
          EKPY+C+ CG  F Q +HL NH      ++HTGEKP
Sbjct: 10 EKPYKCNECGKVFTQNSHLTNHW-----RIHTGEKP 40

>pdb|2EN1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 563- 595) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+P++CE C K F ++S L +H+R+HTGEKP
Sbjct: 10 EKPFKCEECGKRFTQNSQLHSHQRVHTGEKP 40

>pdb|2EP3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 631- 663) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C  C K F   S L+ H++IHTGEKP
Sbjct: 10 EKPYRCAECGKAFTDRSNLFTHQKIHTGEKP 40

>pdb|2EN6|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 887- 919) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY C  C KTF++ S L  H+R HTGEKP
Sbjct: 10 EKPYGCNECGKTFSQKSILSAHQRTHTGEKP 40

>pdb|2EPZ|A Chain A, Solution Structure Of The 4th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+P+ C  C K F+ H  L  HRRIHTGEKP
Sbjct: 10 EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP 40

>pdb|2EQ2|A Chain A, Solution Structure Of The 16th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 20 RPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          +PYQC  C K F++ S L  H+R+HTGEKP
Sbjct: 11 KPYQCNECGKAFSQTSKLARHQRVHTGEKP 40

>pdb|2EMW|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 301- 331) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/32 (59%), Positives = 22/32 (68%)
Query: 17 SGERPYQCEVCEKTFARHSTLWNHRRIHTGEK 48
          SGE+PY C  C K F+  S L  H+RIHTGEK
Sbjct: 6  SGEKPYGCNECGKDFSSKSYLIVHQRIHTGEK 37

>pdb|2EM3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 640- 672) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C+VC K F + + L  H++ HTGEKP
Sbjct: 10 EKPYECKVCSKAFTQKAHLAQHQKTHTGEKP 40

>pdb|2EM3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 640- 672) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 47 EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKP 82
          EKPY C +C  AF Q  HL  H      K HTGEKP
Sbjct: 10 EKPYECKVCSKAFTQKAHLAQHQ-----KTHTGEKP 40

>pdb|2EMJ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 612- 644) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+P++C  C K+F+  S L  H+RIHTGEKP
Sbjct: 10 EKPFECAECGKSFSISSQLATHQRIHTGEKP 40

>pdb|2EMK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 668- 700) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Query: 47 EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKP 82
          EKPY C  CG AF+Q THL  H      +VHTGEKP
Sbjct: 10 EKPYECKECGKAFSQTTHLIQHQ-----RVHTGEKP 40

>pdb|2EQ1|A Chain A, Solution Structure Of The 9th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C  C K F  HS L  H+ IHTGEKP
Sbjct: 10 EKPYKCNECGKAFRAHSNLTTHQVIHTGEKP 40

>pdb|2YSV|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 17 In Zinc Finger Protein 473 Length = 42

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 17 SGERPYQCEVCEKTFARHSTLWNHRRIHTGE 47
          SGE+PY C+ C K F + S L  HRR+HTGE
Sbjct: 6  SGEKPYVCQECGKAFTQSSCLSIHRRVHTGE 36

>pdb|2EOI|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 329- 359) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 17 SGERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          SGE+ ++C  C KTF+ HS L  H+RIHTGE P
Sbjct: 6  SGEKLHECSECRKTFSFHSQLVIHQRIHTGENP 38

>pdb|2YTI|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 564- 596) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C  C K F ++S L  HR IHTGEKP
Sbjct: 10 EKPYKCNECGKVFTQNSHLARHRGIHTGEKP 40

>pdb|2EME|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 725- 757) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY C+ C K F   + L  H+RIHTGEKP
Sbjct: 10 EKPYVCDYCGKAFGLSAELVRHQRIHTGEKP 40

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 26/51 (50%)
Query: 18 GERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNH 68
          G    +C  C K F  +  L  H R HTGEKPY+C  C  A  Q T L+ H
Sbjct: 1  GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYH 51

>pdb|2YTD|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 426- 458) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C  C K F RH+ L  HRRIHTG +P
Sbjct: 10 EKPYKCSECGKAFHRHTHLNEHRRIHTGYRP 40

>pdb|2ENF|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 340- 372) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C  C K F ++S L  HR IHTGEKP
Sbjct: 10 EKPYKCNECGKVFTQNSHLVRHRGIHTGEKP 40

>pdb|2YTS|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 715- 747) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY C  C K+F + S L  HRRIHTGEKP
Sbjct: 10 EKPYICNECGKSFIQKSHLNRHRRIHTGEKP 40

>pdb|2YU8|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 648- 680) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C  C K F ++S L  HRR+HTG KP
Sbjct: 10 EKPYKCNECGKVFTQNSHLARHRRVHTGGKP 40

>pdb|2EML|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 752- 784) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C VC K F+   +L  H+RIH+G+KP
Sbjct: 10 EKPYECSVCGKAFSHRQSLSVHQRIHSGKKP 40

>pdb|2EM6|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 199- 231) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+ Y+C+VC K F++ S L  H+R+HTGEKP
Sbjct: 10 EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP 40

>pdb|2EM6|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 199- 231) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 5/36 (13%)
Query: 47 EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKP 82
          EK Y+C +CG  F+Q++HL+ H      +VHTGEKP
Sbjct: 10 EKCYKCDVCGKEFSQSSHLQTHQ-----RVHTGEKP 40

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 51/138 (36%), Gaps = 43/138 (31%)
Query: 9   LKNHERIHSGERPYQC--EVCEKTFARHSTLWNHRRIHTGEKPYRCSI------------ 54
           L+ H   H+GE+P+ C  E CEK F     L  H   HTGEK + C              
Sbjct: 30  LQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKAN 89
Query: 55  ----------------------CGSAFNQATHLKNHAKVGKCKVHTGEKPHHC--DICDV 90
                                 CG AF +   LK H        HT + P+ C  + CD 
Sbjct: 90  MKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ-----FSHTQQLPYECPHEGCDK 144
Query: 91  GFSDKFALKRHRLIHEKY 108
            FS    LKRH  +H  Y
Sbjct: 145 RFSLPSRLKRHEKVHAGY 162

>pdb|2ENE|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (region 592- 624) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C  C K F  +S L  H+RIHTGEKP
Sbjct: 10 EKPYKCNECGKVFRHNSYLSRHQRIHTGEKP 40

>pdb|2EP1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 435- 467) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C  C K+F + S L  H+RIHTGE P
Sbjct: 10 EKPYECSDCGKSFIKKSQLHVHQRIHTGENP 40

>pdb|2YRH|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (699- 729) From Zinc Finger Protein 473 Length = 44

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 17 SGERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          SG++P  C  C KTF + S L  H+RIH+GEKP
Sbjct: 6  SGKKPLVCNECGKTFRQSSCLSKHQRIHSGEKP 38

>pdb|2EMA|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 312- 344) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+ Y+C  C K F+R+S L  H++IHTGEKP
Sbjct: 10 EKRYKCNECGKVFSRNSQLSQHQKIHTGEKP 40

>pdb|2EMM|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 544- 576) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          ERP++C  C K+F + + L  H+RIHTGEKP
Sbjct: 10 ERPHKCNECGKSFIQSAHLIQHQRIHTGEKP 40

>pdb|2EMP|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 536- 568) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 20 RPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          +PY C  C K F+ +S+L  H+ IHTGEKP
Sbjct: 11 KPYMCNECGKAFSVYSSLTTHQVIHTGEKP 40

>pdb|2EQ3|A Chain A, Solution Structure Of The 17th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C  C K F+  S+L  H+ IHTG+KP
Sbjct: 10 EKPYECNQCGKAFSVRSSLTTHQAIHTGKKP 40

>pdb|2YTN|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 732- 764) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          ++PY+C  C K F ++S L  HR IHTGEKP
Sbjct: 10 KKPYKCNECGKVFTQNSHLARHRGIHTGEKP 40

>pdb|2EQ0|A Chain A, Solution Structure Of The 8th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          E+PY+C  C K F R+S L  H+ IHTGEKP
Sbjct: 10 EKPYKCHECGKVFRRNSHLARHQLIHTGEKP 40

>pdb|2EQW|A Chain A, Solution Structure Of The 6th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 484 Length = 42

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 19/31 (61%)
Query: 17 SGERPYQCEVCEKTFARHSTLWNHRRIHTGE 47
          SGE+PY C  C K F R S    H RIHTGE
Sbjct: 6  SGEKPYVCTECGKAFIRKSHFITHERIHTGE 36

>pdb|2EM1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 637- 667) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 17 SGERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          SGE+PY C  C K F   S L  H+ +HTG KP
Sbjct: 6  SGEKPYSCNECGKAFTFKSQLIVHKGVHTGVKP 38

>pdb|2YTG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 369- 401) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Query: 47 EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKP 82
          EKP++C  CG ++NQ  HL  H      +VHTGEKP
Sbjct: 10 EKPFKCGECGKSYNQRVHLTQHQ-----RVHTGEKP 40

>pdb|2EM4|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 724- 756) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          +RPY+C  C K F   S+L  HRR HTGEKP
Sbjct: 10 QRPYECIECGKAFKTKSSLICHRRSHTGEKP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	203
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-37
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-27
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-37
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-37
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-36
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-30
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	9e-36
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-34
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-22
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-35
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-33
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-33
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-31
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-26
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-33
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-27
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-21
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-11
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-33
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-30
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-28
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-33
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-29
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-22
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-32
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-28
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-31
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-21
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-21
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-31
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-20
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-20
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-31
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-27
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-31
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-26
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-30
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-29
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-27
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-30
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-18
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	9e-30
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-20
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-20
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-29
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-26
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-28
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-28
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-26
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-13
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-28
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-22
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-16
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-25
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	9e-23
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-12
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	9e-25
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-24
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	7e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-24
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-17
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	9e-24
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-22
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-22
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	9e-18
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-12
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-22
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-17
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-21
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-18
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-20
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-19
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-18
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-18
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-12
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-18
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-15
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-18
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-15
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-18
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-14
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-18
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-15
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-18
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-16
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-18
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-16
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-18
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-15
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-18
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-14
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-18
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-14
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-18
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-14
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-18
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-14
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	9e-18
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-14
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	8e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	8e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-17
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-14
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-17
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-14
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-17
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-15
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-17
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-14
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-17
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-14
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-17
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-15
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-17
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-15
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-17
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-14
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-17
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-14
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-17
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-15
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-17
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-14
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-17
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-15
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-17
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-14
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-17
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	8e-15
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	7e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-17
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-14
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-17
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-13
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-17
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-15
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-17
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-14
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-17
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-14
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-17
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-14
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-17
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-14
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-17
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-15
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-17
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-15
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-17
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-14
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-17
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-14
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-17
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-14
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-17
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-14
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-17
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-17
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-14
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-17
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-15
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-17
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-14
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-17
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-14
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-17
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-14
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-17
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-15
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-17
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-15
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-17
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-14
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-17
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-14
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-17
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-14
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-17
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-14
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-17
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-14
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-17
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-14
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-17
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-14
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-17
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-13
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-17
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-14
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-17
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-14
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-17
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-14
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-17
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-13
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-17
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-14
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-17
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-15
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-17
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-13
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-17
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-13
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-17
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-14
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-17
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-14
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-16
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-14
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-16
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-14
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-16
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	6e-14
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	9e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-16
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-13
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-16
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-14
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-16
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-14
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-16
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-16
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-13
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-16
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-16
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-15
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-16
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-13
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-15
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-13
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-15
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	9e-14
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-15
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-15
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-13
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	7e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-15
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-13
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-15
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-12
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	5e-15
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-12
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-15
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-14
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-14
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-14
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-09
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	6e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-13
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	7e-11
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-13
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	7e-13
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-10
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-12
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-12
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-10
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-12
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-12
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	4e-11
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	8e-09
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	7e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-10
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	7e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	6e-09
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	7e-06
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-07
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	6e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	4e-05
1ard_A	29	Yeast transcription factor ADR1; transcription reg	8e-05

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  124 bits (315), Expect = 3e-37
 Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 9/107 (8%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
           + +  HL+ H R H+GE+PYQC+   CE+ F+R   L  H+R HTG KP++C  C   F+
Sbjct: 18  YFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFS 77

Query: 61  QATHLKNHAKVGKCKVHTGEKPHHCDI--CDVGFSDKFALKRHRLIH 105
           ++ HLK H      + HTGEKP  C    C   F+    L RH  +H
Sbjct: 78  RSDHLKTHT-----RTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 98.4 bits (246), Expect = 6e-27
 Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 11/97 (11%)

Query: 17  SGERPYQCE--VCEKTFARHSTLWNHRRIHTGEKPYRCSI--CGSAFNQATHLKNHAKVG 72
           S +RP+ C    C K + + S L  H R HTGEKPY+C    C   F+++  LK H    
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ--- 58

Query: 73  KCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH--EK 107
             + HTG KP  C  C   FS    LK H   H  EK
Sbjct: 59  --RRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEK 93

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  127 bits (321), Expect = 3e-37
 Identities = 48/107 (44%), Positives = 65/107 (60%), Gaps = 7/107 (6%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           FS+S HL  H+R H+GE+PY+C  C K+F+    L  H+R HTGEKPY+C  CG +F+Q 
Sbjct: 31  FSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQR 90

Query: 63  THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH--EK 107
            +L+ H      + HTGEKP+ C  C   FS    L+ H+  H  EK
Sbjct: 91  ANLRAHQ-----RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEK 132

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  125 bits (317), Expect = 9e-37
 Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 7/107 (6%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           FSQ  +L+ H+R H+GE+PY C  C K+F++ + L  H+R HTGEKPY+C  CG +F++ 
Sbjct: 87  FSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSRE 146

Query: 63  THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH--EK 107
            +L  H      + HTGEKP+ C  C   FS + AL  H+  H  +K
Sbjct: 147 DNLHTHQ-----RTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  124 bits (315), Expect = 2e-36
 Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 7/109 (6%)

Query: 1   MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
           +    S        +  GE+PY C  C K+F+R   L  H+R HTGEKPY+C  CG +F+
Sbjct: 1   ISEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFS 60

Query: 61  QATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH--EK 107
               L  H      + HTGEKP+ C  C   FS +  L+ H+  H  EK
Sbjct: 61  DKKDLTRHQ-----RTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEK 104

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  110 bits (277), Expect = 1e-30
 Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 5/80 (6%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           FSQ  HL+ H+R H+GE+PY+C  C K+F+R   L  H+R HTGEKPY+C  CG +F++ 
Sbjct: 115 FSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRR 174

Query: 63  THLKNHAKVGKCKVHTGEKP 82
             L  H      + HTG+K 
Sbjct: 175 DALNVHQ-----RTHTGKKT 189

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  120 bits (304), Expect = 9e-36
 Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 5/100 (5%)

Query: 6   SPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHL 65
           S            ++ + C+ C + F +   L  H R HT E+PY C IC  AF +  HL
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 66  KNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           ++H       +H+ EKP  C  C  GF     L  H+ +H
Sbjct: 62  RDHR-----YIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  115 bits (291), Expect = 8e-34
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 5/83 (6%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           F++S +L  HER H+ ERPY C++C K F R   L +HR IH+ EKP++C  CG  F Q+
Sbjct: 27  FTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQS 86

Query: 63  THLKNHAKVGKCKVHTGEKPHHC 85
             L  H       +H        
Sbjct: 87  RTLAVHK-----TLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 86.3 bits (215), Expect = 2e-22
 Identities = 17/51 (33%), Positives = 28/51 (54%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
           F +  HL++H  IHS E+P++C+ C K F +  TL  H+ +H        +
Sbjct: 55  FRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  118 bits (298), Expect = 4e-35
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
          FS+   LK H R H+G +PY+C+ C+   A  S+L  H RIH+ E+P++C IC  A   +
Sbjct: 18 FSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNS 77

Query: 63 THLKNHAKVGKCKVHTGEKPHHC 85
          + L  H      + HTG+     
Sbjct: 78 SQLTVHL-----RSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  112 bits (283), Expect = 9e-33
 Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 5/90 (5%)

Query: 16  HSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCK 75
                P++CEVC K F+R   L  H R HTG KPY+C  C  A   ++ L  H      +
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL-----R 57

Query: 76  VHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           +H+ E+P  C IC     +   L  H   H
Sbjct: 58  IHSDERPFKCQICPYASRNSSQLTVHLRSH 87

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  115 bits (290), Expect = 1e-33
 Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 7/96 (7%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           F+       H  +H G RPY C VC K F     L  H +IHTG KPY C+IC   F   
Sbjct: 19  FTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWR 78

Query: 63  THLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFAL 98
                H       V +  K +     +   ++    
Sbjct: 79  DSFHRH-------VTSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  108 bits (272), Expect = 5e-31
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 8/93 (8%)

Query: 13  ERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVG 72
               SG++ Y C+ C K+F   S    H  +H G +PY C +CG  F    HL  H    
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH---- 56

Query: 73  KCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
             K+HTG KP+ C+IC   F  + +   HR + 
Sbjct: 57  -MKIHTGIKPYECNICAKRFMWRDSF--HRHVT 86

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 95.6 bits (239), Expect = 6e-26
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           F    HL  H +IH+G +PY+C +C K F    +   HR + +  K Y  +       +A
Sbjct: 47  FKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEA 104

Query: 63  THLKN 67
           +   +
Sbjct: 105 SGPSS 109

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  115 bits (291), Expect = 3e-33
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 10/109 (9%)

Query: 3   FSQSPHLKNHERIHSGERPYQC--EVCEKTFARHSTLWNHRRIHTGEKPYRC--SICGSA 58
           F     L  H R H+GE+P++C  E C K+++R   L  H R HTGEKPY C    C  A
Sbjct: 49  FKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKA 108

Query: 59  FNQATHLKNHAKVGKCKVHTGEKPHHCDI--CDVGFSDKFALKRHRLIH 105
           F+ A+    H    + + H+ EKP+ C +  C   ++D  +L++H    
Sbjct: 109 FSNASDRAKH----QNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  101 bits (253), Expect = 1e-27
 Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 17/111 (15%)

Query: 3   FSQSPHLKNH---ERIHSGERPYQCEVCE-----KTFARHSTLWNHRRIHTGEKPYRCSI 54
           F     L +H   E IH   + + C         + F     L  H R HTGEKP++C+ 
Sbjct: 13  FDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTF 72

Query: 55  --CGSAFNQATHLKNHAKVGKCKVHTGEKPHHC--DICDVGFSDKFALKRH 101
             C  ++++  +LK H      + HTGEKP+ C  + C   FS+     +H
Sbjct: 73  EGCRKSYSRLENLKTHL-----RSHTGEKPYMCEHEGCSKAFSNASDRAKH 118

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 84.2 bits (209), Expect = 4e-21
 Identities = 27/97 (27%), Positives = 34/97 (35%), Gaps = 15/97 (15%)

Query: 19  ERPYQCEVCEKTFARHSTLWNH---RRIHTGEKPYRCSICGS-----AFNQATHLKNHAK 70
           E   + + C + F     L +H     IH   K + C   G       F     L  H  
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM- 59

Query: 71  VGKCKVHTGEKPHHCDI--CDVGFSDKFALKRHRLIH 105
               + HTGEKPH C    C   +S    LK H   H
Sbjct: 60  ----RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH 92

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 58.0 bits (141), Expect = 3e-11
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 3   FSQSPHLKNH-ERIHSGERPYQCEV--CEKTFARHSTLWNHRRIHTG 46
           FS +     H  R HS E+PY C++  C K +   S+L  H +   G
Sbjct: 109 FSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  114 bits (288), Expect = 3e-33
 Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 9/107 (8%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRR---IHTGEKPYRCSICGSAF 59
           F    +LK H R H+GE+P++C  C K + R   L  H     ++  E+ + CS+C   F
Sbjct: 17  FLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETF 76

Query: 60  NQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRL-IH 105
            +   L+ H        HTGE P+ C  C   F  K  L+ H + +H
Sbjct: 77  RRRMELRLHM-----VSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  106 bits (268), Expect = 3e-30
 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 2/90 (2%)

Query: 16  HSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCK 75
            SG    +C  C K F     L  H R HTGEKP+ C  CG  + +  +L  H       
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARN--C 59

Query: 76  VHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           ++  E+   C +C   F  +  L+ H + H
Sbjct: 60  MNRSEQVFTCSVCQETFRRRMELRLHMVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  102 bits (258), Expect = 1e-28
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 7/82 (8%)

Query: 3   FSQSPHLKNHER---IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAF 59
           + +  +L  HE    ++  E+ + C VC++TF R   L  H   HTGE PY+CS C   F
Sbjct: 45  YFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQF 104

Query: 60  NQATHLKNHAKVGKCKVHTGEK 81
            Q   L++H      K+H+G  
Sbjct: 105 MQKKDLQSH----MIKLHSGPS 122

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  114 bits (287), Expect = 4e-33
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 10/107 (9%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI--CGSAFN 60
           F  +  ++ H   H G R + C  C K F   S L  H+ +HTGEKP++C+   CG  F+
Sbjct: 17  FRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFS 75

Query: 61  QATHLKNHAKVGKCKVHTGEKPHHCDI--CDVGFSDKFALKRHRLIH 105
              +L+ H      ++HTG++P+ C    C+  F+    LK H L H
Sbjct: 76  LDFNLRTHV-----RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  103 bits (260), Expect = 6e-29
 Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 9/85 (10%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSI--CGSA 58
           F +S  LK H+ +H+GE+P+QC    C K F+    L  H RIHTG++PY C    C   
Sbjct: 44  FVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKK 103

Query: 59  FNQATHLKNHAKVGKCKVHTGEKPH 83
           F Q+T+LK+H        H   K +
Sbjct: 104 FAQSTNLKSH-----ILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 86.8 bits (216), Expect = 2e-22
 Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 19  ERPYQC--EVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKV 76
            R   C  + C K F  +S +  H   H G + + C+ CG AF +++ LK H       V
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQ-----LV 56

Query: 77  HTGEKPHHCDICDVG--FSDKFALKRHRLIH 105
           HTGEKP  C     G  FS  F L+ H  IH
Sbjct: 57  HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 3   FSQSPHLKNHERIHSGERPYQ 23
           F+QS +LK+H   H+  +  Q
Sbjct: 104 FAQSTNLKSHILTHAKAKNNQ 124

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  111 bits (280), Expect = 2e-32
 Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 5/79 (6%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
          FSQS  L  H RIH+G++P+QC +C + F+R   L  H R HTGEKP+ C ICG  F ++
Sbjct: 16 FSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARS 75

Query: 63 THLKNHAKVGKCKVHTGEK 81
             K H      K+H  +K
Sbjct: 76 DERKRHT-----KIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  101 bits (255), Expect = 1e-28
 Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 7/89 (7%)

Query: 19  ERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKV 76
           ERPY C V  C++ F++  +L  H RIHTG+KP++C IC   F+++ HL  H      + 
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-----RT 56

Query: 77  HTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           HTGEKP  CDIC   F+     KRH  IH
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKIH 85

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score =  108 bits (273), Expect = 2e-31
 Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 5/78 (6%)

Query: 6  SPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHL 65
            H  +H  +   ++PY+C+ C+ +F     L +H+ +HTGEKPYRC+ICG+ FN+  +L
Sbjct: 2  GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANL 61

Query: 66 KNHAKVGKCKVHTGEKPH 83
          K H      ++H+GEKP+
Sbjct: 62 KTHT-----RIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 83.3 bits (207), Expect = 1e-21
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 35  STLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSD 94
               +H  +   +KPY+C  C ++F    +L +H  V     HTGEKP+ C+IC   F+ 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTV-----HTGEKPYRCNICGAQFNR 57

Query: 95  KFALKRHRLIH 105
              LK H  IH
Sbjct: 58  PANLKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 81.3 bits (202), Expect = 8e-21
 Identities = 22/48 (45%), Positives = 32/48 (66%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPY 50
          F    +L +H+ +H+GE+PY+C +C   F R + L  H RIH+GEKPY
Sbjct: 27 FRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score =  108 bits (272), Expect = 2e-31
 Identities = 34/79 (43%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 5  QSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATH 64
           S      E      R Y+C+ C K+F+  S L  HRR HTGEKPY+C  CG AF Q +H
Sbjct: 2  SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61

Query: 65 LKNHAKVGKCKVHTGEKPH 83
          L  H      +VHTG  P 
Sbjct: 62 LIGHH-----RVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 80.2 bits (199), Expect = 2e-20
 Identities = 23/48 (47%), Positives = 29/48 (60%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPY 50
          FS S  L  H R H+GE+PY+C+ C K F + S L  H R+HTG  P 
Sbjct: 28 FSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 79.4 bits (197), Expect = 4e-20
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 32  ARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVG 91
               +           + Y+C  CG +F+ ++ L  H      + HTGEKP+ CD C   
Sbjct: 1   GSSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHR-----RTHTGEKPYKCDECGKA 55

Query: 92  FSDKFALKRHRLIH 105
           F  +  L  H  +H
Sbjct: 56  FIQRSHLIGHHRVH 69

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score =  108 bits (273), Expect = 3e-31
 Identities = 33/81 (40%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE--KPYRCSICGSAFN 60
          F    HL  H+  HSGE+PY C VC   F R   +  H R H G   KPY C  CG  F+
Sbjct: 17 FRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFS 76

Query: 61 QATHLKNHAKVGKCKVHTGEK 81
          +  HL  H K    +VH+G  
Sbjct: 77 RPDHLNGHIK----QVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 99.5 bits (249), Expect = 1e-27
 Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 8/93 (8%)

Query: 16  HSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCK 75
            SG     CE+C K F     L  H+  H+GEKPY C +CG  F +   +  H      +
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHV-----R 56

Query: 76  VHTGE--KPHHCDICDVGFSDKFALKRH-RLIH 105
            H G   KP+ C  C  GFS    L  H + +H
Sbjct: 57  SHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score =  107 bits (270), Expect = 6e-31
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 3/79 (3%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
          FS+S HL  H R H+GE+P+ C++C + FAR      HR I     P          ++ 
Sbjct: 13 FSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKN 71

Query: 63 THLKNHAKVGKCKVHTGEK 81
           HL+N   V + K   GE+
Sbjct: 72 YHLENE--VARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 94.5 bits (236), Expect = 7e-26
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 6/83 (7%)

Query: 20  RPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTG 79
           +P+QC +C + F+R   L  H R HTGEKP+ C ICG  F ++   K H       +   
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR-----DIQH- 55

Query: 80  EKPHHCDICDVGFSDKFALKRHR 102
             P   D  +   S  + L+   
Sbjct: 56  ILPILEDKVEELLSKNYHLENEV 78

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  109 bits (274), Expect = 3e-30
 Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 13/111 (11%)

Query: 3   FSQSPHLKNHERIHSGERPYQCE--VCEKTFARHSTLWNHRRIHTGEKPYRCS--ICGSA 58
           ++++  L+ H   H+GE+P+ C+   CEK F     L  H   HTGEK + C    C   
Sbjct: 24  YNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLR 83

Query: 59  FNQATHLKNHAKVGKCKVHTGEK--PHHCDI--CDVGFSDKFALKRHRLIH 105
           F    ++K H            K   + C    C   F     LK H+  H
Sbjct: 84  FTTKANMKKHF-----NRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH 129

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  107 bits (269), Expect = 1e-29
 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 11/101 (10%)

Query: 11  NHERIHSGERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCS--ICGSAFNQATHLK 66
             + +    + Y C    C   + ++  L  H   HTGEKP+ C    C   F    HL 
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 67  NHAKVGKCKVHTGEKPHHCD--ICDVGFSDKFALKRHRLIH 105
            H+       HTGEK   CD   CD+ F+ K  +K+H    
Sbjct: 62  RHS-----LTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF 97

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  101 bits (254), Expect = 2e-27
 Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 16/113 (14%)

Query: 3   FSQSPHLKNHERIHSGER--PYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCS--ICG 56
           F+   ++K H       +   Y C    C K F +H+ L  H+  HT + PY C    C 
Sbjct: 84  FTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCD 143

Query: 57  SAFNQATHLKNHAKVGKCKVHTG---EKPHHCDICDVGFSDKFALKRHRLIHE 106
             F+  + LK H      KVH G   +K   C      ++    LK     H+
Sbjct: 144 KRFSLPSRLKRHE-----KVHAGYPCKKDDSCSFVGKTWTLY--LKHVAECHQ 189

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score =  104 bits (262), Expect = 7e-30
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 6/78 (7%)

Query: 8  HLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE--KPYRCSICGSAFNQATHL 65
             +  R HSGE+PY+C +C   F +  T+  H      E    + C  C +   + + L
Sbjct: 2  SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 66 KNHAKVGKCKVHTGEKPH 83
            H +    K H+   P 
Sbjct: 62 GVHLR----KQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 79.5 bits (197), Expect = 3e-20
 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 8/73 (10%)

Query: 36  TLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE--KPHHCDICDVGFS 93
           +  +  R H+GEKPY C IC + F Q+  +K H           E     HC  CD   +
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQ-----KHTENVAKFHCPHCDTVIA 56

Query: 94  DKFALKRH-RLIH 105
            K  L  H R  H
Sbjct: 57  RKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 73.3 bits (181), Expect = 8e-18
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 3  FSQSPHLKNHERIHSGE--RPYQCEVCEKTFARHSTLWNH-RRIHTGEKPY 50
          F+QS  +K H      E    + C  C+   AR S L  H R+ H+   P 
Sbjct: 25 FTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score =  104 bits (261), Expect = 9e-30
 Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 5/75 (6%)

Query: 9  LKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNH 68
                IHSGE+PY C  C K F+R S L  H+R+HTGEKPY+C  CG AF+Q + L NH
Sbjct: 2  SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 69 AKVGKCKVHTGEKPH 83
                ++HT     
Sbjct: 62 Q-----RIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 80.2 bits (199), Expect = 2e-20
 Identities = 23/48 (47%), Positives = 33/48 (68%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPY 50
          FS+S  L  H+R+H+GE+PY+C  C K F+++S L NH+RIHT     
Sbjct: 24 FSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 79.4 bits (197), Expect = 3e-20
 Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 5/69 (7%)

Query: 37  LWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKF 96
                 IH+GEKPY C  CG AF++++ L  H +V     HTGEKP+ C  C   FS   
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRV-----HTGEKPYKCLECGKAFSQNS 56

Query: 97  ALKRHRLIH 105
            L  H+ IH
Sbjct: 57  GLINHQRIH 65

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score =  104 bits (261), Expect = 1e-29
 Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 5/77 (6%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
          F +S  L  H  IHS  RPY C+ C K F + S +  H  IHTGEKP++C +CG AF+Q+
Sbjct: 11 FKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQS 70

Query: 63 THLKNHAKVGKCKVHTG 79
          ++L  H+     + HTG
Sbjct: 71 SNLITHS-----RKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 96.3 bits (241), Expect = 1e-26
 Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 22  YQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEK 81
           + C++C K+F R STL  H  IH+  +PY C  CG  F+Q + +K H       +HTGEK
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT-----FIHTGEK 56

Query: 82  PHHCDICDVGFSDKFALKRHRLIH 105
           PH C +C   FS    L  H   H
Sbjct: 57  PHKCQVCGKAFSQSSNLITHSRKH 80

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  103 bits (259), Expect = 2e-28
 Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 9/88 (10%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSI--CGSA 58
           F     L NH R+H+GE+P+ C    C K FAR   L  H+R HTGEKP++C    C   
Sbjct: 72  FKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRR 131

Query: 59  FNQATHLKNHAKVGKCKVHTGEKPHHCD 86
           F  ++  K H       VHT +K     
Sbjct: 132 FANSSDRKKHM-----HVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  102 bits (257), Expect = 3e-28
 Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 18/116 (15%)

Query: 3   FSQSPHLKNHERIHSGERPYQ---------CEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
           FS    L  H  +     P Q         C    K+F     L NH R+HTGEKP+ C 
Sbjct: 35  FSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCP 94

Query: 54  I--CGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI--CDVGFSDKFALKRHRLIH 105
              CG  F ++ +LK H +      HTGEKP  C+   CD  F++    K+H  +H
Sbjct: 95  FPGCGKIFARSENLKIHKRT-----HTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 96.6 bits (241), Expect = 7e-26
 Identities = 27/114 (23%), Positives = 40/114 (35%), Gaps = 16/114 (14%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYR---------CS 53
                   + + I   +     + C++TF+    L  H  +     P +         C 
Sbjct: 7   GQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP 66

Query: 54  ICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI--CDVGFSDKFALKRHRLIH 105
             G +F     L NH      +VHTGEKP  C    C   F+    LK H+  H
Sbjct: 67  REGKSFKAKYKLVNHI-----RVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 62.7 bits (153), Expect = 7e-13
 Identities = 12/88 (13%), Positives = 20/88 (22%), Gaps = 14/88 (15%)

Query: 27  CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHH-- 84
              +        + + I   +       C   F+    L  H       +     P    
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHV-----TMEHVGGPEQNN 57

Query: 85  -------CDICDVGFSDKFALKRHRLIH 105
                  C      F  K+ L  H  +H
Sbjct: 58  HVCYWEECPREGKSFKAKYKLVNHIRVH 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score =  100 bits (251), Expect = 4e-28
 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 9/85 (10%)

Query: 8  HLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE----KPYRCSICGSAFNQAT 63
             +  R H+GE+PY C  C+KTF +   L  H + +         + CS CG  F +  
Sbjct: 2  SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 64 HLKNHAKVGKCKVHTGEKPHHCDIC 88
           +  HA         G      +  
Sbjct: 62 TMARHA-----DNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 84.1 bits (209), Expect = 7e-22
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 4/61 (6%)

Query: 3  FSQSPHLKNHERIHSGE----RPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSA 58
          F Q   L  H + +         + C  C KTF R +T+  H     G         G +
Sbjct: 25 FRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPS 84

Query: 59 F 59
           
Sbjct: 85 S 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 70.6 bits (174), Expect = 1e-16
 Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 9/74 (12%)

Query: 36  TLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE----KPHHCDICDVG 91
           +  +  R HTGEKPY CS C   F Q   L  H      K +           C  C   
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMH-----FKRYHDPNFVPAAFVCSKCGKT 56

Query: 92  FSDKFALKRHRLIH 105
           F+ +  + RH    
Sbjct: 57  FTRRNTMARHADNC 70

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 93.4 bits (233), Expect = 2e-25
 Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 2/71 (2%)

Query: 3  FSQSPHLKNHERIHSGERPYQC--EVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
          +++S HLK H R H+GE+PY C  + C   FAR   L  H R HTG +P++C  C  AF+
Sbjct: 17 YTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFS 76

Query: 61 QATHLKNHAKV 71
          ++ HL  H K 
Sbjct: 77 RSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 86.4 bits (215), Expect = 9e-23
 Identities = 32/92 (34%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 16  HSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI--CGSAFNQATHLKNHAKVGK 73
            +         C KT+ + S L  H R HTGEKPY C    CG  F ++  L  H     
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY---- 57

Query: 74  CKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
            + HTG +P  C  CD  FS    L  H   H
Sbjct: 58  -RKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 59.9 bits (146), Expect = 2e-12
 Identities = 17/42 (40%), Positives = 26/42 (61%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIH 44
          F++S  L  H R H+G RP+QC+ C++ F+R   L  H + H
Sbjct: 47 FARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 91.9 bits (229), Expect = 9e-25
 Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 2/71 (2%)

Query: 3  FSQSPHLKNHERIHSGERPYQC--EVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
          +++S HLK H R H+GE+PY+C  E C+  FAR   L  H R HTG KP++C +C  +F+
Sbjct: 27 YTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFS 86

Query: 61 QATHLKNHAKV 71
          ++ HL  H K 
Sbjct: 87 RSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 91.9 bits (229), Expect = 1e-24
 Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 11/106 (10%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI--CGSAFN 60
              S       RIH  + P     C K + + S L  H R HTGEKPY+C+   C   F 
Sbjct: 3   SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58

Query: 61  QATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHE 106
           ++  L  H      + HTG KP  C +C+  FS    L  H   H+
Sbjct: 59  RSDELTRHY-----RKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 55.7 bits (135), Expect = 7e-11
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 11/78 (14%)

Query: 30  TFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI-- 87
           +          RRIH  + P     C   + +++HLK H      + HTGEKP+ C    
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHL-----RTHTGEKPYKCTWEG 52

Query: 88  CDVGFSDKFALKRHRLIH 105
           CD  F+    L RH   H
Sbjct: 53  CDWRFARSDELTRHYRKH 70

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 89.5 bits (223), Expect = 4e-24
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 5/72 (6%)

Query: 14 RIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGK 73
             S   P +C  C  + +  + L  H RIH  ++P++C+ C     Q ++L  H     
Sbjct: 2  SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM---- 57

Query: 74 CKVHTGEKPHHC 85
           K   G+     
Sbjct: 58 -KKFHGDMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 75.6 bits (187), Expect = 9e-19
 Identities = 16/51 (31%), Positives = 23/51 (45%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
           S    L+ HERIH  +RP++C  C     + S L  H +   G+     S
Sbjct: 19 CSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 71.4 bits (176), Expect = 4e-17
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 5/64 (7%)

Query: 42  RIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRH 101
              +   P +CS C  + +    L+ H ++     H  ++P  C+ C         L +H
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERI-----HCTDRPFKCNYCSFDTKQPSNLSKH 56

Query: 102 RLIH 105
               
Sbjct: 57  MKKF 60

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 88.8 bits (221), Expect = 9e-24
 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 10/78 (12%)

Query: 16 HSGERPYQCEV--CEKTFARHSTLWNHRRI-HTGEKPYRCS--ICGSAFNQATHLKNHAK 70
           SG     C+   C + F+    L +H++  H  +K + C    CG +FN   HLK H K
Sbjct: 2  SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 71 VGKCKVHTGEKPHHCDIC 88
          +     H+  + + C+  
Sbjct: 62 L-----HSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 84.5 bits (210), Expect = 5e-22
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 3  FSQSPHLKNHERI-HSGERPYQCE--VCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAF 59
          FS   +L +H++  H  ++ + C    C K+F     L  H ++H+  + Y C   G + 
Sbjct: 19 FSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 66.4 bits (163), Expect = 4e-15
 Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 8/66 (12%)

Query: 44  HTGEKPYRCSI--CGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD--ICDVGFSDKFALK 99
            +G     C    CG  F+   +L +H K      H  +K   C    C   F+ K  LK
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKY----QHIHQKSFSCPEPACGKSFNFKKHLK 57

Query: 100 RHRLIH 105
            H  +H
Sbjct: 58  EHMKLH 63

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 84.5 bits (210), Expect = 3e-22
 Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 4/62 (6%)

Query: 20 RPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTG 79
          R + CEVC + FAR   L  H R HT EKPY C +C  AF +   L  HA+    K+H+G
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ----KIHSG 56

Query: 80 EK 81
            
Sbjct: 57 NL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 72.9 bits (180), Expect = 9e-18
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNH-RRIHTGEK 48
          F++  HLK H R H+ E+PY C +C + F R   L  H ++IH+G  
Sbjct: 12 FARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 59.4 bits (145), Expect = 1e-12
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)

Query: 48  KPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRH 101
           + + C +C  AF +  HLK H +      HT EKP+ C +C+  F+ +  L RH
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRS-----HTNEKPYPCGLCNRAFTRRDLLIRH 49

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 84.6 bits (210), Expect = 5e-22
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 3  FSQSPHLKNHERIHSGERPYQC--EVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN 60
          F +   LK H+  H+ + PY+C  E C+K F+  S L  H ++H G    +   C     
Sbjct: 13 FKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGK 72

Query: 61 QATHLKNHAK 70
            T    H  
Sbjct: 73 TWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 72.7 bits (179), Expect = 2e-17
 Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 9/85 (10%)

Query: 22  YQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCS--ICGSAFNQATHLKNHAKVGKCKVH 77
           Y C    C K F +H+ L  H+  HT + PY C    C   F+  + LK H      KVH
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH-----EKVH 56

Query: 78  TGEKPHHCDICDVGFSDKFALKRHR 102
            G      D C           +H 
Sbjct: 57  AGYPCKKDDSCSFVGKTWTLYLKHV 81

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 43.8 bits (104), Expect = 1e-06
 Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 5/45 (11%)

Query: 3  FSQSPHLKNHERIHSG---ERPYQCEVCEKTFARHSTLWNHRRIH 44
          FS    LK HE++H+G   ++   C    KT+  +         H
Sbjct: 43 FSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH--VAECH 85

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 81.4 bits (202), Expect = 4e-21
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 13 ERIHSGERPYQCEVCEKTFARHSTLWNHRRI--HTGEKPYRCSICGSAFNQATHLKNHAK 70
          E    GE  Y+C+VC + +   S    H         K Y C  C   F +  ++  H K
Sbjct: 2  EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

Query: 71 V 71
          +
Sbjct: 62 I 62

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 74.5 bits (184), Expect = 2e-18
 Identities = 15/66 (22%), Positives = 22/66 (33%), Gaps = 3/66 (4%)

Query: 42  RIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRH 101
               GE  YRC +C   +   ++   H            K + C  C   F+ K  +  H
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVT---SHKRNVKVYPCPFCFKEFTRKDNMTAH 59

Query: 102 RLIHEK 107
             I  K
Sbjct: 60  VKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 60.3 bits (147), Expect = 6e-13
 Identities = 9/46 (19%), Positives = 15/46 (32%), Gaps = 2/46 (4%)

Query: 3  FSQSPHLKNHERI--HSGERPYQCEVCEKTFARHSTLWNHRRIHTG 46
          ++   +   H         + Y C  C K F R   +  H +I   
Sbjct: 20 YTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 79.8 bits (197), Expect = 3e-20
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 7/76 (9%)

Query: 16 HSGERPYQCEVCEKTFARHSTLWNHRRIHT---GEKPYRCSICGSAFNQATHLKNHAKVG 72
           SG    QCE+C  T  + ++L  H+R H        + C  CG  F +   +  H    
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAH---- 57

Query: 73 KCKVHTGEKPHHCDIC 88
          + K H        +  
Sbjct: 58 RSKSHPALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 68.6 bits (168), Expect = 6e-16
 Identities = 14/65 (21%), Positives = 20/65 (30%), Gaps = 8/65 (12%)

Query: 44  HTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHT---GEKPHHCDICDVGFSDKFALKR 100
            +G    +C ICG    Q   L  H      + H          C+ C   F    ++  
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWH-----QRKHAETVAALRFPCEFCGKRFEKPDSVAA 56

Query: 101 HRLIH 105
           HR   
Sbjct: 57  HRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 60.1 bits (146), Expect = 1e-12
 Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 3/53 (5%)

Query: 3  FSQSPHLKNHERIHS---GERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC 52
            Q   L  H+R H+       + CE C K F +  ++  HR           
Sbjct: 17 CRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 76.1 bits (188), Expect = 4e-19
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNH-RRIHTGEKPYRCSICGSAFNQA 62
          +     S  +PY C+ C K F+R   L  H +++HT E+P++C +  S  +  
Sbjct: 2  SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG 54

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 73.4 bits (181), Expect = 4e-18
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSD 94
          +     +  KPY C  CG  F++  HL  H K    +VHT E+PH C +   G S 
Sbjct: 2  SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIK----QVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 49.9 bits (120), Expect = 4e-09
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 3  FSQSPHLKNHE-RIHSGERPYQCEVCEKTFA 32
          FS+  HL  H  ++H+ ERP++C+V     +
Sbjct: 22 FSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 75.0 bits (185), Expect = 2e-18
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 1  MLFSQSPHLKNHERIHSGERPYQC--EVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSA 58
          M      +L N+       RPY C  E C++ F+R   L  H RIHTG+KP++C IC   
Sbjct: 1  MEPHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRN 58

Query: 59 FNQATHLKNHAK 70
          F+++ HL  H +
Sbjct: 59 FSRSDHLTTHIR 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 58.5 bits (142), Expect = 4e-12
 Identities = 20/43 (46%), Positives = 28/43 (65%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHT 45
          FS+S  L  H RIH+G++P+QC +C + F+R   L  H R HT
Sbjct: 31 FSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 55.0 bits (133), Expect = 8e-11
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 40  HRRIHTGEKPYRCSI--CGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFA 97
              +    +PY C +  C   F+++  L  H ++     HTG+KP  C IC   FS    
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRI-----HTGQKPFQCRICMRNFSRSDH 64

Query: 98  LKRHRLIH 105
           L  H   H
Sbjct: 65  LTTHIRTH 72

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.7 bits (182), Expect = 3e-18
 Identities = 17/43 (39%), Positives = 23/43 (53%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     S E+PY+CE C K + R   L  H+R+H GEK    S
Sbjct: 2  SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 6e-15
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     + EKPY+C  CG  +N+  +L  H      +VH GEK    
Sbjct: 2  SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQ-----RVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 6e-05
 Identities = 6/22 (27%), Positives = 13/22 (59%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          +++  +L  H+R+H GE+    
Sbjct: 22 YNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              + EKP+ C+ C  G++ +  L  H+ +H
Sbjct: 5   SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.3 bits (181), Expect = 4e-18
 Identities = 21/42 (50%), Positives = 25/42 (59%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               SGE+PY+C  C K F RH+ L  HRRIHTG +P   S
Sbjct: 3  SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 2e-15
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               +GEKPY+CS CG AF++ THL  H      ++HTG +P   
Sbjct: 3  SGSSGSGEKPYKCSECGKAFHRHTHLNEHR-----RIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 8e-06
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F +  HL  H RIH+G RP    
Sbjct: 22 FHRHTHLNEHRRIHTGYRPSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.3 bits (181), Expect = 4e-18
 Identities = 19/42 (45%), Positives = 20/42 (47%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               SGERPY C  C K F RHS L  H + H  EK    S
Sbjct: 3  SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 5e-14
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               +GE+PY C+ CG  F + +HL  H      K H  EK    
Sbjct: 3  SGSSGSGERPYGCNECGKNFGRHSHLIEHL-----KRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 6/22 (27%), Positives = 9/22 (40%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F +  HL  H + H  E+    
Sbjct: 22 FGRHSHLIEHLKRHFREKSSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 73.3 bits (181), Expect = 5e-18
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C+VC K F   S L  H  +H+GE+P   S
Sbjct: 3  SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 3e-15
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY+C +CG AF  ++HL  H       VH+GE+P   
Sbjct: 3  SGSSGTGEKPYKCQVCGKAFRVSSHLVQHH-----SVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 11/22 (50%), Positives = 12/22 (54%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F  S HL  H  +HSGERP   
Sbjct: 22 FRVSSHLVQHHSVHSGERPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.9 bits (180), Expect = 5e-18
 Identities = 19/42 (45%), Positives = 26/42 (61%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
                GE+ Y+C+VC K F++ S L  H+R+HTGEKP   S
Sbjct: 3  SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 9e-16
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
                GEK Y+C +CG  F+Q++HL+ H      +VHTGEKP   
Sbjct: 3  SGSSGMGEKCYKCDVCGKEFSQSSHLQTH-----QRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 12/22 (54%), Positives = 17/22 (77%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          FSQS HL+ H+R+H+GE+P   
Sbjct: 22 FSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
               GEK + CD+C   FS    L+ H+ +H
Sbjct: 5   SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.9 bits (180), Expect = 5e-18
 Identities = 16/43 (37%), Positives = 25/43 (58%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+P++C++C K+F   S L  H  +HT EKP   S
Sbjct: 2  SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 3e-16
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD 86
          +     TGEKP++C ICG +F   + L  H       VHT EKP    
Sbjct: 2  SSGSSGTGEKPFKCDICGKSFCGRSRLNRH-----SMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 6/23 (26%), Positives = 9/23 (39%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F     L  H  +H+ E+P    
Sbjct: 22 FCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 8e-05
 Identities = 14/31 (45%), Positives = 17/31 (54%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP  CDIC   F  +  L RH ++H
Sbjct: 5   SSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.9 bits (180), Expect = 6e-18
 Identities = 22/43 (51%), Positives = 27/43 (62%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     SGE+PY+C  C K F ++S L NH RIHTGEKP   S
Sbjct: 2  SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 2e-15
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     +GEKPY+C+ CG  F Q +HL NH      ++HTGEKP   
Sbjct: 2  SSGSSGSGEKPYKCNECGKVFTQNSHLTNHW-----RIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 7e-06
 Identities = 12/22 (54%), Positives = 16/22 (72%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F+Q+ HL NH RIH+GE+P   
Sbjct: 22 FTQNSHLTNHWRIHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 73.0 bits (180), Expect = 6e-18
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+PY+CE C K F     L+ H  +HTGEKP   S
Sbjct: 2  SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 63.7 bits (156), Expect = 2e-14
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TGEKPY+C  CG  F     L  H       VHTGEKP   
Sbjct: 2  SSGSSGTGEKPYKCEECGKGFICRRDLYTHH-----MVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 7/23 (30%), Positives = 10/23 (43%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F     L  H  +H+GE+P    
Sbjct: 22 FICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C+ C  GF  +  L  H ++H
Sbjct: 5   SSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.5 bits (179), Expect = 7e-18
 Identities = 18/42 (42%), Positives = 27/42 (64%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +G++ ++C  C+KTF + S+L  H+RIHTGEKP   S
Sbjct: 3  SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 1e-14
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
                G+K ++C+ C   F Q++ L  H      ++HTGEKP   
Sbjct: 3  SGSSGAGKKLFKCNECKKTFTQSSSLTVHQ-----RIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F+QS  L  H+RIH+GE+P   
Sbjct: 22 FTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 4e-04
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
               G+K   C+ C   F+   +L  H+ IH
Sbjct: 5   SSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.5 bits (179), Expect = 8e-18
 Identities = 21/42 (50%), Positives = 28/42 (66%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C+VC K+F   S+L  H+RIHTGEKP   S
Sbjct: 3  SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 1e-14
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY+C +C  +F   + L  H      ++HTGEKP   
Sbjct: 3  SGSSGTGEKPYKCDVCHKSFRYGSSLTVH-----QRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F     L  H+RIH+GE+P   
Sbjct: 22 FRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ CD+C   F    +L  H+ IH
Sbjct: 5   SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.5 bits (179), Expect = 8e-18
 Identities = 19/42 (45%), Positives = 29/42 (69%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C+VC K F+ H++L  H+R+H+GEKP   S
Sbjct: 3  SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 2e-14
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY C +C  AF+    L  H      +VH+GEKP   
Sbjct: 3  SGSSGTGEKPYECDVCRKAFSHHASLTQHQ-----RVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          FS    L  H+R+HSGE+P    
Sbjct: 22 FSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ CD+C   FS   +L +H+ +H
Sbjct: 5   SSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.6 bits (179), Expect = 9e-18
 Identities = 17/43 (39%), Positives = 25/43 (58%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+ Y C+ C K+F+R   L  H R+H+GEKP   S
Sbjct: 2  SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 1e-14
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TGEK Y C  CG +F++A  L  H      ++H+GEKP   
Sbjct: 2  SSGSSGTGEKLYNCKECGKSFSRAPCLLKHE-----RLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 8e-06
 Identities = 12/22 (54%), Positives = 16/22 (72%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          FS++P L  HER+HSGE+P   
Sbjct: 22 FSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEK ++C  C   FS    L +H  +H
Sbjct: 5   SSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.2 bits (178), Expect = 1e-17
 Identities = 20/42 (47%), Positives = 24/42 (57%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C  C K F  HS L  H+ IHTGEKP   S
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 1e-14
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY+C+ CG AF   ++L  H       +HTGEKP   
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRAHSNLTTHQ-----VIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F    +L  H+ IH+GE+P    
Sbjct: 22 FRAHSNLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.2 bits (178), Expect = 1e-17
 Identities = 18/43 (41%), Positives = 25/43 (58%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +G +PY C  C K F+ +S+L  H+ IHTGEKP   S
Sbjct: 2  SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 3e-14
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TG KPY C+ CG AF+  + L  H       +HTGEKP   
Sbjct: 2  SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQ-----VIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          FS    L  H+ IH+GE+P    
Sbjct: 22 FSVYSSLTTHQVIHTGEKPSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.2 bits (178), Expect = 1e-17
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+PY C VC K F   + L  H R+HT E     S
Sbjct: 2  SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 5e-15
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD 86
          +     TGEKPY C++CG AF  + HL  H      +VHT E      
Sbjct: 2  SSGSSGTGEKPYSCNVCGKAFVLSAHLNQH-----LRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 8/23 (34%), Positives = 10/23 (43%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F  S HL  H R+H+ E      
Sbjct: 22 FVLSAHLNQHLRVHTQETLSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.2 bits (178), Expect = 1e-17
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+PY+C  C K F  +S L  H+RIHTGEKP   S
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 2e-14
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TGEKPY+C+ CG  F   ++L  H      ++HTGEKP   
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQ-----RIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F  + +L  H+RIH+GE+P    
Sbjct: 22 FRHNSYLSRHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.1 bits (178), Expect = 1e-17
 Identities = 23/42 (54%), Positives = 26/42 (61%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GER Y+C  C K FAR STL  H+RIHTGEKP   S
Sbjct: 3  SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 3e-14
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGE+ Y CS CG AF + + L  H      ++HTGEKP   
Sbjct: 3  SGSSGTGERHYECSECGKAFARKSTLIMHQ-----RIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F++   L  H+RIH+GE+P   
Sbjct: 22 FARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 7e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGE+ + C  C   F+ K  L  H+ IH
Sbjct: 5   SSGTGERHYECSECGKAFARKSTLIMHQRIH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.2 bits (178), Expect = 1e-17
 Identities = 20/43 (46%), Positives = 29/43 (67%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     SGE+P++CE C K F ++S L +H+R+HTGEKP   S
Sbjct: 2  SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 6e-15
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     +GEKP++C  CG  F Q + L +H      +VHTGEKP   
Sbjct: 2  SSGSSGSGEKPFKCEECGKRFTQNSQLHSH-----QRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F+Q+  L +H+R+H+GE+P   
Sbjct: 22 FTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              +GEKP  C+ C   F+    L  H+ +H
Sbjct: 5   SSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.7 bits (177), Expect = 2e-17
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+PY+C  C K F ++S L  HR IHTGEKP   S
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 3e-15
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TGEKPY+C+ CG  F Q +HL  H       +HTGEKP   
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLVRHR-----GIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.5 bits (96), Expect = 8e-06
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F+Q+ HL  H  IH+GE+P    
Sbjct: 22 FTQNSHLVRHRGIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.8 bits (177), Expect = 2e-17
 Identities = 21/42 (50%), Positives = 24/42 (57%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY CE C K F   S L  H+RIHTGEKP   S
Sbjct: 3  SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 2e-14
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY C  CG AF   + L+ H      ++HTGEKP   
Sbjct: 3  SGSSGTGEKPYNCEECGKAFIHDSQLQEHQ-----RIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F     L+ H+RIH+GE+P    
Sbjct: 22 FIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP++C+ C   F     L+ H+ IH
Sbjct: 5   SSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.8 bits (177), Expect = 2e-17
 Identities = 20/42 (47%), Positives = 24/42 (57%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               SGE+PY C+ C K F   + L  H+RIHTGEKP   S
Sbjct: 3  SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 1e-14
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               +GEKPY C  CG AF  +  L  H      ++HTGEKP   
Sbjct: 3  SGSSGSGEKPYVCDYCGKAFGLSAELVRHQ-----RIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F  S  L  H+RIH+GE+P   
Sbjct: 22 FGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              +GEKP+ CD C   F     L RH+ IH
Sbjct: 5   SSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.7 bits (177), Expect = 2e-17
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C  C K F R+S L  H+ IHTGEKP   S
Sbjct: 3  SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 9e-15
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY+C  CG  F + +HL  H       +HTGEKP   
Sbjct: 3  SGSSGTGEKPYKCHECGKVFRRNSHLARHQ-----LIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F ++ HL  H+ IH+GE+P    
Sbjct: 22 FRRNSHLARHQLIHTGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.8 bits (177), Expect = 2e-17
 Identities = 20/42 (47%), Positives = 24/42 (57%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GER Y+C  C K F + STL  H+RIH GEKP   S
Sbjct: 3  SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 2e-14
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGE+ Y CS CG AF Q + L  H      ++H GEKP   
Sbjct: 3  SGSSGTGERHYECSECGKAFIQKSTLSMHQ-----RIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 10/22 (45%), Positives = 12/22 (54%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F Q   L  H+RIH GE+P   
Sbjct: 22 FIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGE+ + C  C   F  K  L  H+ IH
Sbjct: 5   SSGTGERHYECSECGKAFIQKSTLSMHQRIH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.8 bits (177), Expect = 2e-17
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +G++PY+C  C K F ++S L  HR IHTGEKP   S
Sbjct: 3  SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 5e-15
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TG+KPY+C+ CG  F Q +HL  H       +HTGEKP   
Sbjct: 3  SGSSGTGKKPYKCNECGKVFTQNSHLARHR-----GIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F+Q+ HL  H  IH+GE+P    
Sbjct: 22 FTQNSHLARHRGIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.4 bits (176), Expect = 2e-17
 Identities = 20/42 (47%), Positives = 24/42 (57%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+P+ C  C K F+ H  L  HRRIHTGEKP   S
Sbjct: 3  SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 7e-14
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKP+ C  CG AF+    L  H      ++HTGEKP   
Sbjct: 3  SGSSGTGEKPFDCIDCGKAFSDHIGLNQHR-----RIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          FS    L  H RIH+GE+P    
Sbjct: 22 FSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 15/31 (48%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP  C  C   FSD   L +HR IH
Sbjct: 5   SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.4 bits (176), Expect = 2e-17
 Identities = 20/43 (46%), Positives = 27/43 (62%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+PY+C  C K FA+ + L  H+RIHTGEKP   S
Sbjct: 2  SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 8e-15
 Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TGEKPYRC  CG AF Q  +L  H      ++HTGEKP   
Sbjct: 2  SSGSSGTGEKPYRCGECGKAFAQKANLTQHQ-----RIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F+Q  +L  H+RIH+GE+P   
Sbjct: 22 FAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C  C   F+ K  L +H+ IH
Sbjct: 5   SSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.4 bits (176), Expect = 2e-17
 Identities = 21/42 (50%), Positives = 25/42 (59%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               SGE+PY C  C KTF++ S L  H+R HTGEKP   S
Sbjct: 3  SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 4e-14
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               +GEKPY C+ CG  F+Q + L  H      + HTGEKP   
Sbjct: 3  SGSSGSGEKPYGCNECGKTFSQKSILSAHQ-----RTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          FSQ   L  H+R H+GE+P    
Sbjct: 22 FSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              +GEKP+ C+ C   FS K  L  H+  H
Sbjct: 5   SSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.4 bits (176), Expect = 2e-17
 Identities = 18/43 (41%), Positives = 23/43 (53%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+PY C  C K F+  S L  H R H+GEKP   S
Sbjct: 2  SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 1e-13
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +      GEKPY CS CG AF+  ++L  H      + H+GEKP   
Sbjct: 2  SSGSSGAGEKPYGCSECGKAFSSKSYLIIHM-----RTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          FS   +L  H R HSGE+P    
Sbjct: 22 FSSKSYLIIHMRTHSGEKPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.4 bits (176), Expect = 2e-17
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+CE C K +     L  H+++HTGE+P   S
Sbjct: 3  SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 4e-15
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY+C  CG  +N   +L  H      KVHTGE+P   
Sbjct: 3  SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQ-----KVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          ++   +L  H+++H+GERP   
Sbjct: 22 YNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C+ C  G++ KF L  H+ +H
Sbjct: 5   SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 71.4 bits (176), Expect = 2e-17
 Identities = 19/42 (45%), Positives = 26/42 (61%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+P++C  C K+F+  S L  H+RIHTGEKP   S
Sbjct: 3  SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 62.5 bits (153), Expect = 5e-14
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKP+ C+ CG +F+ ++ L  H      ++HTGEKP   
Sbjct: 3  SGSSGTGEKPFECAECGKSFSISSQLATHQ-----RIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          FS S  L  H+RIH+GE+P    
Sbjct: 22 FSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 13/31 (41%), Positives = 14/31 (45%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP  C  C   FS    L  H+ IH
Sbjct: 5   SSGTGEKPFECAECGKSFSISSQLATHQRIH 35

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 71.4 bits (176), Expect = 2e-17
 Identities = 20/42 (47%), Positives = 24/42 (57%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +G+RPY+C  C K F   S+L  HRR HTGEKP   S
Sbjct: 3  SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 62.2 bits (152), Expect = 8e-14
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TG++PY C  CG AF   + L  H      + HTGEKP   
Sbjct: 3  SGSSGTGQRPYECIECGKAFKTKSSLICHR-----RSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 8/22 (36%), Positives = 10/22 (45%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F     L  H R H+GE+P   
Sbjct: 22 FKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.2 bits (82), Expect = 9e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TG++P+ C  C   F  K +L  HR  H
Sbjct: 5   SSGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 71.4 bits (176), Expect = 2e-17
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICG 56
          +     SGE+P++CE C K F  +S  ++H+R H+GEKP   S  G
Sbjct: 2  SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 63.0 bits (154), Expect = 4e-14
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 5/48 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD 86
          +     +GEKP++C  CG  F   +   +H      + H+GEKP    
Sbjct: 2  SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQ-----RSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F  +    +H+R HSGE+P    
Sbjct: 22 FYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.2 bits (82), Expect = 9e-04
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              +GEKP  C+ C  GF        H+  H
Sbjct: 5   SSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.4 bits (176), Expect = 2e-17
 Identities = 21/42 (50%), Positives = 25/42 (59%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY C  C K+F + S L  HRRIHTGEKP   S
Sbjct: 3  SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 1e-14
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY C+ CG +F Q +HL  H      ++HTGEKP   
Sbjct: 3  SGSSGTGEKPYICNECGKSFIQKSHLNRHR-----RIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 11/23 (47%), Positives = 13/23 (56%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F Q  HL  H RIH+GE+P    
Sbjct: 22 FIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 15/31 (48%), Positives = 17/31 (54%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C+ C   F  K  L RHR IH
Sbjct: 5   SSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.4 bits (176), Expect = 2e-17
 Identities = 20/43 (46%), Positives = 27/43 (62%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+PY+C  C K F++ S L  H+RIHTGEKP   S
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 7e-15
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TGEKPY+C+ CG AF+Q + L  H      ++HTGEKP   
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFSQTSKLARHQ-----RIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          FSQ+  L  H+RIH+GE+P    
Sbjct: 22 FSQTSKLARHQRIHTGEKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.4 bits (176), Expect = 3e-17
 Identities = 20/42 (47%), Positives = 26/42 (61%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C  C K F ++S L NH+RIHTG KP   S
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 6e-15
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY+C+ CG  F Q +HL NH      ++HTG KP   
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLANHQ-----RIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F+Q+ HL NH+RIH+G +P    
Sbjct: 22 FTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C+ C   F+    L  H+ IH
Sbjct: 5   SSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C  C K F   S+L  H+  H+GEKP   S
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.6 bits (153), Expect = 5e-14
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY+C+ CG AF   + L  H        H+GEKP   
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRARSSLAIHQ-----ATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 3e-05
 Identities = 8/22 (36%), Positives = 10/22 (45%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F     L  H+  HSGE+P   
Sbjct: 22 FRARSSLAIHQATHSGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 19/42 (45%), Positives = 26/42 (61%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+ Y+C  C K F+R+S L  H++IHTGEKP   S
Sbjct: 3  SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 64.1 bits (157), Expect = 1e-14
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEK Y+C+ CG  F++ + L  H      K+HTGEKP   
Sbjct: 3  SGSSGTGEKRYKCNECGKVFSRNSQLSQHQ-----KIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 40.6 bits (96), Expect = 9e-06
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          FS++  L  H++IH+GE+P    
Sbjct: 22 FSRNSQLSQHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 21/42 (50%), Positives = 24/42 (57%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GERPY C VC K F   S L  H++IHTGEKP   S
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.0 bits (157), Expect = 1e-14
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGE+PY C++CG AF   ++L  H      K+HTGEKP   
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRSNLIKHQ-----KIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F+   +L  H++IH+GE+P   
Sbjct: 22 FTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGE+P+ C +C   F+D+  L +H+ IH
Sbjct: 5   SSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 19/42 (45%), Positives = 26/42 (61%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               SGE+P++C+ C K F ++  L +H RIHTGEKP   S
Sbjct: 3  SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.4 bits (158), Expect = 1e-14
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               +GEKP++C  CG AF Q  HL +H      ++HTGEKP   
Sbjct: 3  SGSSGSGEKPFKCKECGKAFRQNIHLASHL-----RIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 8e-06
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F Q+ HL +H RIH+GE+P    
Sbjct: 22 FRQNIHLASHLRIHTGEKPSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     SGE+PY+C  C K + R   L  H+R+HTGEK    S
Sbjct: 2  SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 7e-15
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 5/48 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD 86
          +     +GEKPY+C  CG  + +   L  H      +VHTGEK     
Sbjct: 2  SSGSSGSGEKPYKCVECGKGYKRRLDLDFH-----QRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 6/22 (27%), Positives = 12/22 (54%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          + +   L  H+R+H+GE+    
Sbjct: 22 YKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              +GEKP+ C  C  G+  +  L  H+ +H
Sbjct: 5   SSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 18/43 (41%), Positives = 25/43 (58%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +G + ++C  C K F R STL  H++IHTGEKP   S
Sbjct: 2  SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 2e-14
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TG K + C+ CG AF + + L  H      K+HTGEKP   
Sbjct: 2  SSGSSGTGGKHFECTECGKAFTRKSTLSMHQ-----KIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 5e-05
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F++   L  H++IH+GE+P    
Sbjct: 22 FTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 9e-04
 Identities = 11/31 (35%), Positives = 13/31 (41%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TG K   C  C   F+ K  L  H+ IH
Sbjct: 5   SSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C  C K F ++S L  HR IHTGEKP   S
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 8e-15
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY+C+ CG  F Q +HL  H       +HTGEKP   
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHR-----GIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 8e-06
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F+Q+ HL  H  IH+GE+P    
Sbjct: 22 FTQNSHLARHRGIHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 18/43 (41%), Positives = 26/43 (60%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+P++C  C K F+R S L  H ++HTGEKP   S
Sbjct: 2  SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 63.7 bits (156), Expect = 2e-14
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TGEKP++C  CG  F++ + L  H      K+HTGEKP   
Sbjct: 2  SSGSSGTGEKPFKCVECGKGFSRRSALNVH-----HKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          FS+   L  H ++H+GE+P   
Sbjct: 22 FSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 14/31 (45%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP  C  C  GFS + AL  H  +H
Sbjct: 5   SSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE P+ C  C K F   + L  H++IHTGE+P   S
Sbjct: 2  SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 1e-14
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TGE P+ CS CG  F   T+L  H      K+HTGE+P   
Sbjct: 2  SSGSSGTGENPFICSECGKVFTHKTNLIIHQ-----KIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F+   +L  H++IH+GERP   
Sbjct: 22 FTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGE P  C  C   F+ K  L  H+ IH
Sbjct: 5   SSGTGENPFICSECGKVFTHKTNLIIHQKIH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 21/42 (50%), Positives = 28/42 (66%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               SGE+P+QCE C K F ++S L +H+R+HTGEKP   S
Sbjct: 3  SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 1e-14
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               +GEKP++C  CG  F Q +HL +H      +VHTGEKP   
Sbjct: 3  SGSSGSGEKPFQCEECGKRFTQNSHLHSHQ-----RVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 10/22 (45%), Positives = 17/22 (77%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F+Q+ HL +H+R+H+GE+P   
Sbjct: 22 FTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              +GEKP  C+ C   F+    L  H+ +H
Sbjct: 5   SSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 17/43 (39%), Positives = 23/43 (53%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+PY C  C K F   S L  H++IHT +KP   S
Sbjct: 2  SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 5e-15
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TGEKPY C+ CG AF   ++L  H      K+HT +KP   
Sbjct: 2  SSGSSGTGEKPYICAECGKAFTIRSNLIKHQ-----KIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 6/23 (26%), Positives = 13/23 (56%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F+   +L  H++IH+ ++P    
Sbjct: 22 FTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C  C   F+ +  L +H+ IH
Sbjct: 5   SSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C  C K F ++S L  HRR+HTG KP   S
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 8e-15
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY+C+ CG  F Q +HL  H      +VHTG KP   
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHR-----RVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F+Q+ HL  H R+H+G +P    
Sbjct: 22 FTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C+ C   F+    L RHR +H
Sbjct: 5   SSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 18/42 (42%), Positives = 26/42 (61%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C VC K F+   +L  H+RIH+G+KP   S
Sbjct: 3  SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 5e-14
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY CS+CG AF+    L  H      ++H+G+KP   
Sbjct: 3  SGSSGTGEKPYECSVCGKAFSHRQSLSVHQ-----RIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          FS    L  H+RIHSG++P    
Sbjct: 22 FSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C +C   FS + +L  H+ IH
Sbjct: 5   SSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +G +PYQC  C K F++ S L  H+R+HTGEKP   S
Sbjct: 3  SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 2e-14
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TG KPY+C+ CG AF+Q + L  H      +VHTGEKP   
Sbjct: 3  SGSSGTGGKPYQCNECGKAFSQTSKLARHQ-----RVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 8e-06
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          FSQ+  L  H+R+H+GE+P    
Sbjct: 22 FSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TG KP+ C+ C   FS    L RH+ +H
Sbjct: 5   SSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 3e-17
 Identities = 19/42 (45%), Positives = 27/42 (64%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C +C K+F + S L  H++IHTGEKP   S
Sbjct: 3  SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 4e-14
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY CSICG +F + + L  H      ++HTGEKP   
Sbjct: 3  SGSSGTGEKPYECSICGKSFTKKSQLHVHQ-----QIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F++   L  H++IH+GE+P   
Sbjct: 22 FTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 14/31 (45%), Positives = 17/31 (54%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C IC   F+ K  L  H+ IH
Sbjct: 5   SSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 4e-17
 Identities = 18/43 (41%), Positives = 25/43 (58%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+P++C  C+K F   S L  H+R HTGEKP   S
Sbjct: 2  SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 4e-14
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TGEKP+ CS C  AFN  ++L  H      + HTGEKP   
Sbjct: 2  SSGSSGTGEKPFECSECQKAFNTKSNLIVHQ-----RTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F+   +L  H+R H+GE+P    
Sbjct: 22 FNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP  C  C   F+ K  L  H+  H
Sbjct: 5   SSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 4e-17
 Identities = 19/43 (44%), Positives = 27/43 (62%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GERP++C  C K+F + + L  H+RIHTGEKP   S
Sbjct: 2  SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 1e-14
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TGE+P++C+ CG +F Q+ HL  H      ++HTGEKP   
Sbjct: 2  SSGSSGTGERPHKCNECGKSFIQSAHLIQHQ-----RIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 9e-06
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F QS HL  H+RIH+GE+P    
Sbjct: 22 FIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 7e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGE+PH C+ C   F     L +H+ IH
Sbjct: 5   SSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 4e-17
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE PY+C  C K F+R   L +H+R H GEKP   S
Sbjct: 3  SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 4e-14
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGE PY C  CG AF++   L +H      + H GEKP   
Sbjct: 3  SGSSGTGENPYECHECGKAFSRKYQLISHQ-----RTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          FS+   L +H+R H+GE+P   
Sbjct: 22 FSRKYQLISHQRTHAGEKPSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 4e-17
 Identities = 16/43 (37%), Positives = 24/43 (55%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+PY+C  C K+F   S L  H++ HTGE+    S
Sbjct: 2  SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 1e-14
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TGEKPY+CS CG +F   + L+ H      K HTGE+    
Sbjct: 2  SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQ-----KCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 5e-05
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F+    L+ H++ H+GER    
Sbjct: 22 FTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C  C   F+ K  L+ H+  H
Sbjct: 5   SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 70.6 bits (174), Expect = 4e-17
 Identities = 18/43 (41%), Positives = 23/43 (53%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +G +PY C  C KTF+  S L  H+R HTG KP   S
Sbjct: 2  SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 61.4 bits (150), Expect = 1e-13
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TG KPY CS C   F+  + L  H      + HTG KP   
Sbjct: 2  SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQ-----RSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 38.3 bits (90), Expect = 5e-05
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          FS    L  H+R H+G +P   
Sbjct: 22 FSLKSQLIVHQRSHTGVKPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.7 bits (174), Expect = 4e-17
 Identities = 16/43 (37%), Positives = 26/43 (60%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+PY+C  C K F  +S+   H+R+HTG++P   S
Sbjct: 2  SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.8 bits (156), Expect = 2e-14
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TGEKPY+C  CG AF   +    H      ++HTG++P   
Sbjct: 2  SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQ-----RLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 7/23 (30%), Positives = 12/23 (52%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F  +     H+R+H+G+RP    
Sbjct: 22 FGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C  C   F D  +  +H+ +H
Sbjct: 5   SSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 5e-17
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C  C K F   S L+ H++IHTGEKP   S
Sbjct: 3  SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 2e-14
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPYRC+ CG AF   ++L  H      K+HTGEKP   
Sbjct: 3  SGSSGTGEKPYRCAECGKAFTDRSNLFTHQ-----KIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F+   +L  H++IH+GE+P    
Sbjct: 22 FTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C  C   F+D+  L  H+ IH
Sbjct: 5   SSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 5e-17
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C  C K+F + S L  H+RIHTGE P   S
Sbjct: 3  SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.6 bits (153), Expect = 5e-14
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY CS CG +F + + L  H      ++HTGE P   
Sbjct: 3  SGSSGTGEKPYECSDCGKSFIKKSQLHVHQ-----RIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F +   L  H+RIH+GE P   
Sbjct: 22 FIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C  C   F  K  L  H+ IH
Sbjct: 5   SSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 5e-17
 Identities = 18/42 (42%), Positives = 22/42 (52%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               SGERP++C  C K F R S L  H R+H+ EK    S
Sbjct: 3  SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 1e-13
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               +GE+P++C+ CG  F + +HL  H      ++H+ EK    
Sbjct: 3  SGSSGSGERPFKCNECGKGFGRRSHLAGHL-----RLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F +  HL  H R+HS E+    
Sbjct: 22 FGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 7e-04
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              +GE+P  C+ C  GF  +  L  H  +H
Sbjct: 5   SSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 5e-17
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+PY+C  C K F R S L  H++ HTGE+    S
Sbjct: 2  SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 2e-14
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TGEKPY+CS CG AF + + L  H      + HTGE+    
Sbjct: 2  SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQ-----QSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F++   L  H++ H+GER    
Sbjct: 22 FTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 4e-04
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C  C   F+ K  L  H+  H
Sbjct: 5   SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.2 bits (173), Expect = 5e-17
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+P++C  C K++ +   L  H+R+HTGEKP   S
Sbjct: 3  SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 8e-15
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKP++C  CG ++NQ  HL  H      +VHTGEKP   
Sbjct: 3  SGSSGTGEKPFKCGECGKSYNQRVHLTQHQ-----RVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          ++Q  HL  H+R+H+GE+P   
Sbjct: 22 YNQRVHLTQHQRVHTGEKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.3 bits (173), Expect = 5e-17
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C  C K F+  S+L  H+ IHTG+KP   S
Sbjct: 3  SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 1e-13
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY C+ CG AF+  + L  H       +HTG+KP   
Sbjct: 3  SGSSGTGEKPYECNQCGKAFSVRSSLTTHQ-----AIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          FS    L  H+ IH+G++P    
Sbjct: 22 FSVRSSLTTHQAIHTGKKPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.9 bits (172), Expect = 7e-17
 Identities = 18/42 (42%), Positives = 26/42 (61%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+P++C  C K+F+ +S L  H+RIHTGE P   S
Sbjct: 3  SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 1e-13
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKP+ C  CG +F+  + L  H      ++HTGE P   
Sbjct: 3  SGSSGTGEKPHECRECGKSFSFNSQLIVHQ-----RIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 3e-05
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          FS +  L  H+RIH+GE P   
Sbjct: 22 FSFNSQLIVHQRIHTGENPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 69.9 bits (172), Expect = 7e-17
 Identities = 19/43 (44%), Positives = 23/43 (53%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +      GER ++C  C K F + S    HRRIHTGEKP   S
Sbjct: 2  SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 63.7 bits (156), Expect = 2e-14
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +      GE+ +RCS CG  F QA++   H      ++HTGEKP   
Sbjct: 2  SSGSSGHGERGHRCSDCGKFFLQASNFIQHR-----RIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F Q+ +   H RIH+GE+P   
Sbjct: 22 FLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 10/31 (32%), Positives = 12/31 (38%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
               GE+ H C  C   F       +HR IH
Sbjct: 5   SSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.9 bits (172), Expect = 8e-17
 Identities = 18/42 (42%), Positives = 26/42 (61%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C+VC K F + + L  H++ HTGEKP   S
Sbjct: 3  SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 1e-14
 Identities = 21/46 (45%), Positives = 22/46 (47%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY C +C  AF Q  HL  H      K HTGEKP   
Sbjct: 3  SGSSGTGEKPYECKVCSKAFTQKAHLAQHQ-----KTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F+Q  HL  H++ H+GE+P    
Sbjct: 22 FTQKAHLAQHQKTHTGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 69.9 bits (172), Expect = 1e-16
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY C+ C K+F   S L  H+R+H+GEKP   S
Sbjct: 3  SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 63.0 bits (154), Expect = 3e-14
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY C  CG +F  A+ L  H      +VH+GEKP   
Sbjct: 3  SGSSGTGEKPYNCKECGKSFRWASCLLKHQ-----RVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F  +  L  H+R+HSGE+P    
Sbjct: 22 FRWASCLLKHQRVHSGEKPSGPS 44

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 69.4 bits (171), Expect = 1e-16
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC 52
               +GE+PY+C  C+K F   S L  H+R HTGE     
Sbjct: 3  SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 63.3 bits (155), Expect = 3e-14
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY C+ C  AFN  ++L  H      + HTGE     
Sbjct: 3  SGSSGTGEKPYECNECQKAFNTKSNLMVHQ-----RTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.6 bits (91), Expect = 4e-05
 Identities = 7/22 (31%), Positives = 11/22 (50%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F+   +L  H+R H+GE     
Sbjct: 22 FNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.1 bits (82), Expect = 8e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TGEKP+ C+ C   F+ K  L  H+  H
Sbjct: 5   SSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 69.5 bits (171), Expect = 1e-16
 Identities = 16/43 (37%), Positives = 24/43 (55%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +G++P++C  C K+F     L  H+RIHTGEK    S
Sbjct: 2  SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 62.6 bits (153), Expect = 6e-14
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TG+KP+ C+ CG +F    +L  H      ++HTGEK    
Sbjct: 2  SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQ-----RIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 39.1 bits (92), Expect = 3e-05
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F    +L  H+RIH+GE+    
Sbjct: 22 FRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 35.2 bits (82), Expect = 9e-04
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              TG+KP  C  C   F  K  L  H+ IH
Sbjct: 5   SSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 1e-16
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
                GE+PYQC  C K+F+    L  H   HT EKP   S
Sbjct: 3  SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 2e-13
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
                GEKPY+CS CG +F+ +  L  H        HT EKP   
Sbjct: 3  SGSSGEGEKPYQCSECGKSFSGSYRLTQHW-----ITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 8/22 (36%), Positives = 10/22 (45%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          FS S  L  H   H+ E+P   
Sbjct: 22 FSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
               GEKP+ C  C   FS  + L +H + H
Sbjct: 5   SSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 69.4 bits (171), Expect = 1e-16
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC 52
          +     +G +PY C  C K F   S L  H R HTGE     
Sbjct: 2  SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 62.5 bits (153), Expect = 5e-14
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TG KPY C+ CG AF   ++L  H      + HTGE     
Sbjct: 2  SSGSSGTGMKPYVCNECGKAFRSKSYLIIHT-----RTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 7/22 (31%), Positives = 9/22 (40%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F    +L  H R H+GE     
Sbjct: 22 FRSKSYLIIHTRTHTGESGPSS 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 69.5 bits (171), Expect = 1e-16
 Identities = 18/42 (42%), Positives = 27/42 (64%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+PY+C+ C K F++ + L  H+R+HTGEKP   S
Sbjct: 3  SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 64.5 bits (158), Expect = 1e-14
 Identities = 23/46 (50%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKPY C  CG AF+Q THL  H      +VHTGEKP   
Sbjct: 3  SGSSGTGEKPYECKECGKAFSQTTHLIQHQ-----RVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/22 (50%), Positives = 16/22 (72%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          FSQ+ HL  H+R+H+GE+P   
Sbjct: 22 FSQTTHLIQHQRVHTGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 68.7 bits (169), Expect = 3e-16
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
                GE+ ++C  C+  F++ S+L  H+ +H GEKP   S
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 59.9 bits (146), Expect = 6e-13
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
                GEK ++C  C   F+QA+ L+ H       VH GEKP   
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQASSLRLHQ-----NVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          FSQ+  L+ H+ +H GE+P   
Sbjct: 22 FSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
               GEK   C  CD+ FS   +L+ H+ +H
Sbjct: 5   SSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 3e-16
 Identities = 17/42 (40%), Positives = 25/42 (59%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               SG++PY+C+ C KTF +   L  H+R+HTGE+    S
Sbjct: 3  SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 2e-13
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               +G+KPY C  C   F Q  HL  H      +VHTGE+    
Sbjct: 3  SGSSGSGKKPYECKECRKTFIQIGHLNQHK-----RVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 9e-06
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F Q  HL  H+R+H+GER     
Sbjct: 22 FIQIGHLNQHKRVHTGERSSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 68.3 bits (168), Expect = 3e-16
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +G  PY+C  CEK+F+    L  H+R+HT EKP   S
Sbjct: 3  SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 59.5 bits (145), Expect = 9e-13
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
                G  PY+CS C  +F+    L  H      ++HT EKP   
Sbjct: 3  SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQ-----RMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          FS    L  H+R+H+ E+P   
Sbjct: 22 FSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
               G  P+ C  C+  FS K  L  H+ +H
Sbjct: 5   SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 67.6 bits (166), Expect = 8e-16
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNH-RRIHTGEKPYRCS 53
          +     +G++PY+C  C K F ++++L  H R  HTGEKP   S
Sbjct: 2  SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 64.9 bits (159), Expect = 7e-15
 Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 4/47 (8%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     TG+KPY C  CG AF Q T L  H +      HTGEKP   
Sbjct: 2  SSGSSGTGKKPYECIECGKAFIQNTSLIRHWR----YYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 1/23 (4%)

Query: 3  FSQSPHLKNHER-IHSGERPYQC 24
          F Q+  L  H R  H+GE+P   
Sbjct: 22 FIQNTSLIRHWRYYHTGEKPSGP 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 67.2 bits (165), Expect = 8e-16
 Identities = 17/43 (39%), Positives = 22/43 (51%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     S  + +QC  C + F   S L  H+RIHTGEKP   S
Sbjct: 2  SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 60.6 bits (148), Expect = 3e-13
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     +  K ++C  CG  F   +HL  H      ++HTGEKP   
Sbjct: 2  SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQ-----RIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              +  K H C  C  GF+ K  L +H+ IH
Sbjct: 5   SSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F+   HL  H+RIH+GE+P   
Sbjct: 22 FTLKSHLNQHQRIHTGEKPSGP 43

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 66.8 bits (164), Expect = 1e-15
 Identities = 17/39 (43%), Positives = 20/39 (51%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPY 50
                GE+PY CE+C   F    TL +H RIHTG  P 
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 61.4 bits (150), Expect = 2e-13
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 5/44 (11%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPH 83
                GEKPY C ICG+ F     LK+H      ++HTG  P 
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHL-----RIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 41.3 bits (98), Expect = 4e-06
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 72  GKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           G      GEKP+ C+IC   F     LK H  IH
Sbjct: 1   GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 38.6 bits (91), Expect = 4e-05
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 3  FSQSPHLKNHERIHSGERPY 22
          F     LK+H RIH+G  P 
Sbjct: 21 FRHLQTLKSHLRIHTGSGPS 40

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 66.8 bits (164), Expect = 1e-15
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC 52
          +     SGE+PY+C  C K F   S L  H R H G      
Sbjct: 2  SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 61.8 bits (151), Expect = 9e-14
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 5/47 (10%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
          +     +GEKPY C+ CG AF   + L  H      + H G      
Sbjct: 2  SSGSSGSGEKPYECNECGKAFIWKSLLIVHE-----RTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 7/22 (31%), Positives = 8/22 (36%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F     L  HER H+G      
Sbjct: 22 FIWKSLLIVHERTHAGVSGPSS 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.5 bits (163), Expect = 2e-15
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+P+QC+ C   F+   +L+ H R H    P   S
Sbjct: 3  SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 1e-11
 Identities = 13/47 (27%), Positives = 18/47 (38%), Gaps = 5/47 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD 86
               TGEKP++C  CG  F+ +  L  H      + H    P    
Sbjct: 3  SGSSGTGEKPFQCKECGMNFSWSCSLFKHL-----RSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 8/22 (36%), Positives = 8/22 (36%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          FS S  L  H R H    P   
Sbjct: 22 FSWSCSLFKHLRSHERTDPSGP 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 66.0 bits (162), Expect = 2e-15
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 13 ERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
              SGE+P+ C  CEK F+  S L  H++ H  EKP   S
Sbjct: 2  SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 55.6 bits (135), Expect = 2e-11
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)

Query: 42 RIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
             +GEKP+ CS C  AF+  ++L  H      + H  EKP   
Sbjct: 3  SGSSGEKPFGCSCCEKAFSSKSYLLVHQ-----QTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          FS   +L  H++ H+ E+P   
Sbjct: 20 FSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              +GEKP  C  C+  FS K  L  H+  H
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 65.6 bits (161), Expect = 3e-15
 Identities = 16/40 (40%), Positives = 19/40 (47%)

Query: 13 ERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC 52
              SGE PY+C  C K F R   L +H+R H GE     
Sbjct: 2  SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 60.2 bits (147), Expect = 3e-13
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 5/45 (11%)

Query: 41 RRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
              +GE PY CS CG AFN+   L +H      + H GE     
Sbjct: 2  SSGSSGENPYECSECGKAFNRKDQLISHQ-----RTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F++   L +H+R H+GE     
Sbjct: 20 FNRKDQLISHQRTHAGESGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 65.3 bits (160), Expect = 5e-15
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPY 50
                GE+PY+C+ C K F++  +L  H R+HTG  P 
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 61.0 bits (149), Expect = 2e-13
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 5/44 (11%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPH 83
                GEKPYRC  CG AF+Q   L  H      +VHTG  P 
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVH-----IRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
               GEKP+ CD C   FS K +L  H  +H
Sbjct: 4   GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 3  FSQSPHLKNHERIHSGERPY 22
          FSQ   L  H R+H+G  P 
Sbjct: 21 FSQKGSLIVHIRVHTGSGPS 40

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 65.2 bits (160), Expect = 5e-15
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC 52
               +GE PY+C  C K F+R   L +H++ H+G+     
Sbjct: 3  SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 58.3 bits (142), Expect = 2e-12
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGE PY C  CG  F++   L +H      K H+G+     
Sbjct: 3  SGSSGTGENPYECCECGKVFSRKDQLVSHQ-----KTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.2 bits (90), Expect = 6e-05
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          FS+   L +H++ HSG+     
Sbjct: 22 FSRKDQLVSHQKTHSGQSGPSS 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.3 bits (160), Expect = 5e-15
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               +GE+P +C  C K F   S L  H+R H  +K    S
Sbjct: 3  SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 2e-12
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               TGEKP +C+ CG AF   + L  H      + H  +K    
Sbjct: 3  SGSSGTGEKPCKCTECGKAFCWKSQLIMHQ-----RTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 5/22 (22%), Positives = 8/22 (36%)

Query: 3  FSQSPHLKNHERIHSGERPYQC 24
          F     L  H+R H  ++    
Sbjct: 22 FCWKSQLIMHQRTHVDDKHSGP 43

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 64.9 bits (159), Expect = 6e-15
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPY 50
                GE+PY+CE C   F + + L  H  IHTG  P 
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 62.2 bits (152), Expect = 6e-14
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 5/44 (11%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPH 83
                GEKPY+C  CG+ F Q  HL+ H       +HTG  P 
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHV-----LIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 3  FSQSPHLKNHERIHSGERPY 22
          F Q  HL+ H  IH+G  P 
Sbjct: 21 FVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 72  GKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           G      GEKP+ C+ C   F     L+ H LIH
Sbjct: 1   GSSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 64.1 bits (157), Expect = 1e-14
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
               SGE+ + C+ C K F   S L  H+R+H GEK    S
Sbjct: 3  SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.5 bits (132), Expect = 7e-11
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 5/47 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD 86
               +GEK + C  CG  F   + L+ H      +VH GEK     
Sbjct: 3  SGSSGSGEKSHTCDECGKNFCYISALRIHQ-----RVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              +GEK H CD C   F    AL+ H+ +H
Sbjct: 5   SSGSGEKSHTCDECGKNFCYISALRIHQRVH 35

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 63.1 bits (154), Expect = 3e-14
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 11 NHERIHSGERPYQC--EVCEKTFARHSTLWNHRRIHTGEKPYRCS 53
          +     +GE+P+ C    C   F+R   L  HRR H+G KP   S
Sbjct: 2  SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 50.8 bits (122), Expect = 1e-09
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 7/50 (14%)

Query: 39 NHRRIHTGEKPYRCS--ICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD 86
          +     TGEKP+ C+   CG  F+++  L  H +      H+G KP    
Sbjct: 2  SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS-----HSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 35.4 bits (82), Expect = 6e-04
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          FS+S  L  H R HSG +P    
Sbjct: 24 FSRSDELSRHRRSHSGVKPSGPS 46

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 60.7 bits (148), Expect = 3e-13
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 13 ERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPY 50
              SG+R Y+C+ C K+F +  +L  H RIHTG  P 
Sbjct: 2  SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 54.1 bits (131), Expect = 7e-11
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 5/42 (11%)

Query: 42 RIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPH 83
             +G++ Y C  CG +F Q   L  H      ++HTG  P 
Sbjct: 3  SGSSGQRVYECQECGKSFRQKGSLTLH-----ERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 37.2 bits (87), Expect = 1e-04
 Identities = 10/20 (50%), Positives = 11/20 (55%)

Query: 3  FSQSPHLKNHERIHSGERPY 22
          F Q   L  HERIH+G  P 
Sbjct: 20 FRQKGSLTLHERIHTGSGPS 39

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 62.1 bits (150), Expect = 5e-13
 Identities = 16/99 (16%), Positives = 27/99 (27%), Gaps = 2/99 (2%)

Query: 4   SQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQAT 63
           S     K +  I +G   ++C+ C   +     L  H    TG          +   +  
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE-TGHYRDDNHETDNNNPKRW 60

Query: 64  HLKNHAKVGKC-KVHTGEKPHHCDICDVGFSDKFALKRH 101
                  + +       +K   C  C   F     L  H
Sbjct: 61  SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 50.1 bits (119), Expect = 1e-08
 Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 6/75 (8%)

Query: 32  ARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVG 91
           +  S+   +  I TG   +RC  C +A++    L  H         TG         D  
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN------ETGHYRDDNHETDNN 55

Query: 92  FSDKFALKRHRLIHE 106
              +++  R R + E
Sbjct: 56  NPKRWSKPRKRSLLE 70

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 47.1 bits (111), Expect = 2e-07
 Identities = 11/71 (15%), Positives = 17/71 (23%), Gaps = 5/71 (7%)

Query: 3  FSQSPHLKNHERI-----HSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGS 57
          +     L  H                      +  R  +L         +K  +C  CG 
Sbjct: 29 YDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGH 88

Query: 58 AFNQATHLKNH 68
          +F     L  H
Sbjct: 89 SFESLQDLSVH 99

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 60.5 bits (147), Expect = 7e-13
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 6  SPHLKNHERIHSGERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSI--CGSAFNQ 61
          S      +   S  R + C    C KT+ + S L  H R HTGEKP+ CS   C   F +
Sbjct: 2  SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 62 ATHLKNHAKV 71
          +  L  H + 
Sbjct: 62 SDELSRHRRT 71

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 54.3 bits (131), Expect = 1e-10
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 9/75 (12%)

Query: 35  STLWNHRRIHTGEKPYRCSI--CGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI--CDV 90
           S     +   +  + + CS   CG  + +++HLK H +      HTGEKP  C    C+ 
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRT-----HTGEKPFSCSWKGCER 57

Query: 91  GFSDKFALKRHRLIH 105
            F+    L RHR  H
Sbjct: 58  RFARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 53.9 bits (130), Expect = 2e-10
 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEV--CEKTFARHSTLWNHRRIH 44
          + +S HLK H R H+GE+P+ C    CE+ FAR   L  HRR H
Sbjct: 29 YFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 60.4 bits (146), Expect = 1e-12
 Identities = 20/80 (25%), Positives = 27/80 (33%), Gaps = 14/80 (17%)

Query: 15 IHSGERPYQCEVCEKTFARHSTLWNH-RRIHTGEKPYR--------CSICGSAFNQATHL 65
          I   +     + C++TF+    L  H    H G             C   G +F     L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 66 KNHAKVGKCKVHTGEKPHHC 85
           NH      +VHTGEK    
Sbjct: 79 VNH-----IRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 49.2 bits (117), Expect = 2e-08
 Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 9/60 (15%)

Query: 3  FSQSPHLKNH-ERIHSGERPYQCEVCE--------KTFARHSTLWNHRRIHTGEKPYRCS 53
          FS    L  H    H G       VC         K+F     L NH R+HTGEK    S
Sbjct: 35 FSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 44.2 bits (104), Expect = 1e-06
 Identities = 13/71 (18%), Positives = 18/71 (25%), Gaps = 12/71 (16%)

Query: 43  IHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHH--------CDICDVGFSD 94
           I   +       C   F+    L  H        H G    +        C      F  
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHV----TMEHVGGPEQNNHVCYWEECPREGKSFKA 74

Query: 95  KFALKRHRLIH 105
           K+ L  H  +H
Sbjct: 75  KYKLVNHIRVH 85

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 58.8 bits (143), Expect = 1e-12
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPY 50
                GE PY C  C K+F +  +L  H+R  +   P 
Sbjct: 2  SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 51.9 bits (125), Expect = 5e-10
 Identities = 12/44 (27%), Positives = 15/44 (34%), Gaps = 5/44 (11%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPH 83
                GE PY C  CG +F Q   L  H      +  +   P 
Sbjct: 2  SSGSSGGETPYLCGQCGKSFTQRGSLAVHQ-----RSCSQSGPS 40

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 58.7 bits (143), Expect = 2e-12
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC 52
               +  + Y C  C K F R   L  H++IHT +     
Sbjct: 3  SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.8 bits (138), Expect = 9e-12
 Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 5/46 (10%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
               T  K Y C+ CG AF +  HL  H      K+HT +     
Sbjct: 3  SGSSGTDSKSYNCNECGKAFTRIFHLTRHQ-----KIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.2 bits (87), Expect = 1e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
              T  K ++C+ C   F+  F L RH+ IH
Sbjct: 5   SSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 55.0 bits (133), Expect = 4e-11
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query: 14 RIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC 52
             SGE+PY C  C++TF+ ++ L  H+++HT +     
Sbjct: 3  SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.9 bits (117), Expect = 8e-09
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 5/44 (11%)

Query: 42 RIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC 85
             +GEKPY C+ C   F+    L  H      K+HT +     
Sbjct: 3  SGSSGEKPYSCAECKETFSDNNRLVQHQ-----KMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 35.0 bits (81), Expect = 7e-04
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 77  HTGEKPHHCDICDVGFSDKFALKRHRLIH 105
            +GEKP+ C  C   FSD   L +H+ +H
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMH 33

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 53.2 bits (127), Expect = 3e-10
 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 5/60 (8%)

Query: 22 YQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEK 81
          Y CE C     + S L  H R HT  +PY C+ C  +F    +L  H      K     K
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHM-----KSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 49.7 bits (118), Expect = 5e-09
 Identities = 14/45 (31%), Positives = 18/45 (40%)

Query: 4  SQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEK 48
           +   LK H R H+  RPY C  C  +F     L  H +     K
Sbjct: 12 KKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.8 bits (100), Expect = 2e-06
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 50  YRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           Y C  CG    + + LK H +      HT  +P+HC  C+  F  K  L +H    
Sbjct: 2   YICEECGIRXKKPSMLKKHIRT-----HTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 49.9 bits (119), Expect = 3e-09
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 14 RIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC 55
                +   CE+C K F     L  H+  H+GEKPY     
Sbjct: 5  SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 43.8 bits (103), Expect = 7e-07
 Identities = 14/47 (29%), Positives = 16/47 (34%), Gaps = 5/47 (10%)

Query: 42 RIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC 88
                K   C ICG  F    HL  H        H+GEKP+     
Sbjct: 5  SSGRTRKQVACEICGKIFRDVYHLNRHK-----LSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 37.6 bits (87), Expect = 1e-04
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVC 27
          F    HL  H+  HSGE+PY     
Sbjct: 22 FRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 36.1 bits (83), Expect = 4e-04
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 77  HTGEKPHHCDICDVGFSDKFALKRHRLIH 105
               K   C+IC   F D + L RH+L H
Sbjct: 7   GRTRKQVACEICGKIFRDVYHLNRHKLSH 35

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 49.1 bits (117), Expect = 6e-09
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKP 49
          +     +GE P++C  C++ F + + L  H R H  +  
Sbjct: 2  SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 43.3 bits (102), Expect = 1e-06
 Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 5/45 (11%)

Query: 39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPH 83
          +      GE P++CS C   F Q  +L  H      + H  +   
Sbjct: 2  SSGSSGAGENPFKCSKCDRVFTQRNYLVQHE-----RTHARKSGP 41

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 49.3 bits (117), Expect = 1e-08
 Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 12/74 (16%)

Query: 32  ARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVG 91
               +    ++IH G++  +CS CG  F + +              +  K   C+ C   
Sbjct: 1   GSSGSSGKRQKIHLGDRSQKCSKCGIIFIRRST------------LSRRKTPMCEKCRKD 48

Query: 92  FSDKFALKRHRLIH 105
              + AL +     
Sbjct: 49  SCQEAALNKDEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 41.6 bits (97), Expect = 7e-06
 Identities = 8/35 (22%), Positives = 13/35 (37%)

Query: 16 HSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPY 50
           S  +   CE C K   + + L       +G+K  
Sbjct: 34 LSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 45.8 bits (109), Expect = 1e-07
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIH 44
            R  +G +P+QC  C+++F+R   L  HR+ H
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 44.6 bits (106), Expect = 2e-07
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAK 70
            R  TG KP++C  C  +F+++ HL  H K
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 45.7 bits (107), Expect = 6e-07
 Identities = 14/77 (18%), Positives = 20/77 (25%), Gaps = 6/77 (7%)

Query: 3   FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
                              + C +C   F+   +L  H R    E    C +C   F   
Sbjct: 56  LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTST 113

Query: 63  THLKNHAKVGKCKVHTG 79
               +H     CK H  
Sbjct: 114 DSALDHV----CKKHNI 126

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 40.7 bits (94), Expect = 5e-05
 Identities = 15/98 (15%), Positives = 28/98 (28%), Gaps = 11/98 (11%)

Query: 8   HLKNHERIHSGERPYQCEV----CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQAT 63
             + H+     +R  +  V            S+             + C +C   F+ + 
Sbjct: 29  LKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSV 88

Query: 64  HLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRH 101
            LK H       +   E    C +C   F+   +   H
Sbjct: 89  SLKQH-------IRYTEHTKVCPVCKKEFTSTDSALDH 119

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.0 bits (100), Expect = 5e-06
 Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 8/93 (8%)

Query: 10  KNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHA 69
            +       +  YQC +C    +      +H R+        C  C   F      + H 
Sbjct: 5   SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH- 61

Query: 70  KVGKCKVHTGEKPHHCDICDVGFSDKFALKRHR 102
                +     K   C  C   F   F++ RH+
Sbjct: 62  -----ESKCEYKKLTCLECMRTFKSSFSIWRHQ 89

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 37.6 bits (86), Expect = 5e-04
 Identities = 13/66 (19%), Positives = 17/66 (25%), Gaps = 3/66 (4%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQA 62
           S      +HER+        C  C   F        H       K   C  C   F  +
Sbjct: 26 LSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS 82

Query: 63 THLKNH 68
            +  H
Sbjct: 83 FSIWRH 88

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 38.4 bits (90), Expect = 4e-05
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 20 RPYQC--EVCEKTFARHSTLWNHRRIHTGEK 48
          RP+ C    C K F R   L  H+R HTGEK
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 37.7 bits (88), Expect = 8e-05
 Identities = 15/29 (51%), Positives = 17/29 (58%)

Query: 20 RPYQCEVCEKTFARHSTLWNHRRIHTGEK 48
          R + CEVC + FAR   L  H R HT EK
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	203
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.96
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.95
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.93
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.89
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.86
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.86
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.84
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.84
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.84
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.83
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.82
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.82
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.82
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.81
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.8
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.76
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.75
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.75
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.75
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.74
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.73
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.73
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.72
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.72
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.71
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.7
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.7
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.7
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.7
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.7
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.67
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.67
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.63
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.63
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.62
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.62
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.61
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.61
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.59
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.57
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.57
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.57
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.57
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.56
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.54
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.54
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.54
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.53
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.53
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.53
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.52
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.52
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.52
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.51
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.5
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.49
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.47
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.47
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.47
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.47
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.47
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.43
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.39
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.38
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.37
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.37
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.34
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.34
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.33
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.33
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.32
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.32
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.31
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.31
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.31
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.3
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.29
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.27
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.27
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.26
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.26
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.25
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.23
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.22
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.22
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.21
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.19
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.19
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.18
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.18
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.17
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.16
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.16
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.15
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.14
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.13
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.13
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.12
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.1
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.1
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.06
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.01
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.01
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.99
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.97
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.95
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.94
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.93
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.93
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.92
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.92
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.89
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.89
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.88
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.88
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.86
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.86
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.83
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.82
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.81
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.8
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.78
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.77
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.75
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.72
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.71
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.71
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.7
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.63
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.62
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.53
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.51
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.51
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.48
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.46
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.45
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.43
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.4
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.39
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.37
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.37
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.37
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.36
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.35
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.34
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.33
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.32
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.31
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.29
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.29
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.6
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.59
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.25
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.22
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.17
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.45
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.16
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.12
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.11
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.09
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.08
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.33
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.06
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.02
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.01
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.01
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.01
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.0
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.26
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.24
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.99
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.98
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.97
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.94
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.92
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.92
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.89
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.86
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.84
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.81
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.81
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.8
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.76
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.72
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.32
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.79
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.54
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.13
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.09
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.79
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.43
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.39
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.0
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	92.75
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	91.38
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	91.36
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	88.96
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	87.58
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	86.93
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	86.86
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	86.14
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	85.64
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	84.86
4rxn_A	54	Rubredoxin; electron transfer(iron-sulfur protein)	82.57
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	82.42
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	81.96
1e8j_A	52	Rubredoxin; iron-sulfur-protein, zinc-substitution	81.63
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	81.39
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	81.15

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.96  E-value=3.5e-29  Score=184.87  Aligned_cols=100  Identities=46%  Similarity=0.922  Sum_probs=58.0

Q ss_pred             CCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCC
Q psy2103           2 LFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEK   81 (203)
Q Consensus         2 ~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   81 (203)
                      .|.....|..|++.|.++++|.|++|++.|.+...|..|++.|+++++|.|..|++.|.+...|..|+.     .|.+++
T Consensus        30 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-----~h~~~~  104 (190)
T 2i13_A           30 SFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR-----THTGEK  104 (190)
T ss_dssp             -CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH-----HHHTCC
T ss_pred             ccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHH-----hcCCCC
Confidence            455555666666666666666666666666666666666666666666666666666666666666654     455555


Q ss_pred             CcccCCCCccCCChHHHHHHHHHhh
Q psy2103          82 PHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        82 ~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      +|.|+.|++.|.+...|..|++.|+
T Consensus       105 ~~~C~~C~~~f~~~~~l~~H~~~h~  129 (190)
T 2i13_A          105 PYACPECGKSFSQLAHLRAHQRTHT  129 (190)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCcCCCCCCccCCHHHHHHHHHHhC
Confidence            5666666666666666666655554

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.95  E-value=1.2e-28  Score=182.01  Aligned_cols=132  Identities=38%  Similarity=0.746  Sum_probs=104.6

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCC
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE   80 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   80 (203)
                      +.|.+...|..|++.|.++++|.|.+|++.|.+...|..|++.|+++++|.|..|++.|.+...|..|++     .|.++
T Consensus        57 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-----~h~~~  131 (190)
T 2i13_A           57 KSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR-----THTGE  131 (190)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHH-----HHHCC
T ss_pred             chhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH-----HhCCC
Confidence            3577778888888888888888888888888888888888888888888888888888888888888885     67778


Q ss_pred             CCcccCCCCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhh
Q psy2103          81 KPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLS  160 (203)
Q Consensus        81 ~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  160 (203)
                      ++|.|+.|++.|.+...|..|++.|++.                            .+|.|+.|++.|.....|.+|+++
T Consensus       132 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~----------------------------~~~~C~~C~~~f~~~~~L~~H~~~  183 (190)
T 2i13_A          132 KPYKCPECGKSFSREDNLHTHQRTHTGE----------------------------KPYKCPECGKSFSRRDALNVHQRT  183 (190)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCC----------------------------CCEECTTTCCEESSHHHHHHHHTT
T ss_pred             CCeECCCCCcccCCHHHHHHHHHhcCCC----------------------------CCeECCCCCCccCCHHHHHHHHHh
Confidence            8888888888888888888888887541                            457888888888888888888888


Q ss_pred             ccCCC
Q psy2103         161 QSGYP  165 (203)
Q Consensus       161 h~~~~  165 (203)
                      |+++.
T Consensus       184 H~~~k  188 (190)
T 2i13_A          184 HTGKK  188 (190)
T ss_dssp             C----
T ss_pred             cCCCC
Confidence            87653

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.93  E-value=2.6e-26  Score=169.44  Aligned_cols=131  Identities=27%  Similarity=0.522  Sum_probs=119.9

Q ss_pred             CCCCChhHHHHHHHHhCCCCceec--ccccccccChhhHHHHHHHhcCCCCeeCc--chhhhccChhHHHhhhhcCCccc
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQC--EVCEKTFARHSTLWNHRRIHTGEKPYRCS--ICGSAFNQATHLKNHAKVGKCKV   76 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~   76 (203)
                      ++|.+...|..|++.|.++++|.|  .+|++.|.+...|..|+++|.++++|.|.  .|++.|.+...|..|+.    +.
T Consensus        22 ~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~----~~   97 (190)
T 1tf6_A           22 AAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN----RF   97 (190)
T ss_dssp             CBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHH----TT
T ss_pred             chhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHH----Hh
Confidence            478999999999999999999999  88999999999999999999999999999  89999999999999995    25


Q ss_pred             c-CCCCCccc--CCCCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCcccccch--hhHhHHHH
Q psy2103          77 H-TGEKPHHC--DICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCES--SRLIFEAW  151 (203)
Q Consensus        77 ~-~~~~~~~C--~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~  151 (203)
                      | .+.++|.|  +.|++.|.+...|..|++.|.+                            ..+|.|+.  |++.|...
T Consensus        98 h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~----------------------------~~~~~C~~~~C~k~F~~~  149 (190)
T 1tf6_A           98 HNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ----------------------------QLPYECPHEGCDKRFSLP  149 (190)
T ss_dssp             SSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSS----------------------------SCSSBCCSSSCCCBCSSH
T ss_pred             cCCCcceeeCCCCCCccccCCHHHHHHHHHHhCC----------------------------CCCccCCCCCCCchhcCH
Confidence            6 46789999  8899999999999999998854                            25689977  99999999


Q ss_pred             HHHHHHHhhccC
Q psy2103         152 AKLQKELLSQSG  163 (203)
Q Consensus       152 ~~l~~H~~~h~~  163 (203)
                      ..|.+|++.|++
T Consensus       150 ~~L~~H~~~H~~  161 (190)
T 1tf6_A          150 SRLKRHEKVHAG  161 (190)
T ss_dssp             HHHHHHHTSSCS
T ss_pred             HHHHHHHHHhCC
Confidence            999999999887

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=4.5e-26  Score=162.69  Aligned_cols=130  Identities=28%  Similarity=0.549  Sum_probs=117.6

Q ss_pred             CCCCChhHHHHHHH---HhCCCCceecccc-----cccccChhhHHHHHHHhcCCCCeeCcc--hhhhccChhHHHhhhh
Q psy2103           1 MLFSQSPHLKNHER---IHSGERPYQCEVC-----EKTFARHSTLWNHRRIHTGEKPYRCSI--CGSAFNQATHLKNHAK   70 (203)
Q Consensus         1 ~~F~~~~~l~~H~~---~h~~~~~~~C~~C-----~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~   70 (203)
                      +.|.+..+|..|++   .|.++++|.|.+|     ++.|.+...|..|++.|+++++|.|.+  |++.|.+...|..|++
T Consensus        11 ~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~   90 (155)
T 2gli_A           11 QEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLR   90 (155)
T ss_dssp             CBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHH
Confidence            47999999999998   6778899998864     499999999999999999999999986  9999999999999996


Q ss_pred             cCCccccCCCCCcccCC--CCccCCChHHHHHHH-HHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCcccccch--hh
Q psy2103          71 VGKCKVHTGEKPHHCDI--CDVGFSDKFALKRHR-LIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCES--SR  145 (203)
Q Consensus        71 ~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~  145 (203)
                           .|.++++|.|+.  |++.|.+...|..|+ +.|.+                            ..+|.|+.  |+
T Consensus        91 -----~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~----------------------------~~~~~C~~~~C~  137 (155)
T 2gli_A           91 -----SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN----------------------------EKPYVCKLPGCT  137 (155)
T ss_dssp             -----HTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCS----------------------------CCCEECCSTTTC
T ss_pred             -----HcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCC----------------------------CCCeeCCCCCCc
Confidence                 788999999998  999999999999998 55532                            25699988  99


Q ss_pred             HhHHHHHHHHHHHhhccC
Q psy2103         146 LIFEAWAKLQKELLSQSG  163 (203)
Q Consensus       146 ~~f~~~~~l~~H~~~h~~  163 (203)
                      +.|.....|.+|++.|+|
T Consensus       138 ~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          138 KRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CEESSHHHHHHHHHHSCC
T ss_pred             cccCCHHHHHHHHHhhcC
Confidence            999999999999999875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.92  E-value=1.4e-25  Score=165.55  Aligned_cols=128  Identities=30%  Similarity=0.562  Sum_probs=116.4

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecc--cccccccChhhHHHHH-HHh-cCCCCeeC--cchhhhccChhHHHhhhhcCCc
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCE--VCEKTFARHSTLWNHR-RIH-TGEKPYRC--SICGSAFNQATHLKNHAKVGKC   74 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~   74 (203)
                      +.|.+..+|..|+++|.++++|.|.  .|++.|.+...|..|+ +.| .++++|.|  ..|++.|.+...|..|++    
T Consensus        52 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~----  127 (190)
T 1tf6_A           52 KGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF----  127 (190)
T ss_dssp             CCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG----
T ss_pred             hhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH----
Confidence            5799999999999999999999999  8999999999999999 555 36789999  889999999999999996    


Q ss_pred             cccCCCCCcccCC--CCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCcccccch---hhHhHH
Q psy2103          75 KVHTGEKPHHCDI--CDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCES---SRLIFE  149 (203)
Q Consensus        75 ~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~---C~~~f~  149 (203)
                       .|.++++|.|+.  |++.|.+...|..|++.|.+                               |.|..   |++.|.
T Consensus       128 -~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~-------------------------------~~C~~~~~C~~~f~  175 (190)
T 1tf6_A          128 -SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-------------------------------YPCKKDDSCSFVGK  175 (190)
T ss_dssp             -GGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS-------------------------------CCCCSTTTCCCCCS
T ss_pred             -HhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC-------------------------------CcCCCCCcCCCccc
Confidence             799999999988  99999999999999988732                               67888   999999


Q ss_pred             HHHHHHHHHhhccCC
Q psy2103         150 AWAKLQKELLSQSGY  164 (203)
Q Consensus       150 ~~~~l~~H~~~h~~~  164 (203)
                      ....|.+|++.|+++
T Consensus       176 ~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          176 TWTLYLKHVAECHQD  190 (190)
T ss_dssp             CHHHHHHHHTTCC--
T ss_pred             cHHHHHHHHHhhcCC
Confidence            999999999999864

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=3e-25  Score=152.48  Aligned_cols=117  Identities=30%  Similarity=0.589  Sum_probs=105.6

Q ss_pred             CCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChH
Q psy2103          17 SGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKF   96 (203)
Q Consensus        17 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~   96 (203)
                      .++++|.|.+|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|+..++  .+.++++|.|+.|++.|.+..
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~--~~~~~~~~~C~~C~~~f~~~~   80 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNC--MNRSEQVFTCSVCQETFRRRM   80 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCC--CCSCCCCEECSSSCCEESSHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhh--cCCCCCCeECCCCCCccCCHH
Confidence            467899999999999999999999999999999999999999999999999997322  357788999999999999999


Q ss_pred             HHHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhh-ccC
Q psy2103          97 ALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLS-QSG  163 (203)
Q Consensus        97 ~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~  163 (203)
                      .|..|++.|++                            ..+|.|++|++.|.....|.+|++. |.+
T Consensus        81 ~l~~H~~~h~~----------------------------~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           81 ELRLHMVSHTG----------------------------EMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHHHHHSS----------------------------SCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHHHHHHcCC----------------------------CCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            99999999854                            2569999999999999999999986 544

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=5.8e-25  Score=150.05  Aligned_cols=112  Identities=36%  Similarity=0.659  Sum_probs=104.4

Q ss_pred             CCCCceeccc--ccccccChhhHHHHHHHhcCCCCeeCc--chhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccC
Q psy2103          17 SGERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCS--ICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGF   92 (203)
Q Consensus        17 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f   92 (203)
                      .++++|.|.+  |++.|.+...|..|++.|.++++|.|.  .|++.|.+...|..|++     .|.++++|.|+.|++.|
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f   76 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-----RHTGVKPFQCKTCQRKF   76 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHH-----HHHCCCCEECTTTCCEE
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHH-----HcCCCCCccCCccCchh
Confidence            4678999998  999999999999999999999999999  79999999999999996     78899999999999999


Q ss_pred             CChHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCccccc--chhhHhHHHHHHHHHHHhhc
Q psy2103          93 SDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKC--ESSRLIFEAWAKLQKELLSQ  161 (203)
Q Consensus        93 ~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  161 (203)
                      .+...|..|++.|.+.                            .+|.|  +.||+.|.....|.+|+++|
T Consensus        77 ~~~~~l~~H~~~h~~~----------------------------~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           77 SRSDHLKTHTRTHTGE----------------------------KPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             SCHHHHHHHHHHHHTC----------------------------CCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHhcCC----------------------------CCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999998652                            56899  89999999999999999876

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=8e-26  Score=157.59  Aligned_cols=112  Identities=25%  Similarity=0.403  Sum_probs=99.8

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCcc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVG   91 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~   91 (203)
                      |..+|.|+++|.|.+|++.|.+...|..|+++|.++++|.|..|++.|.....|..|+.     .|.++++|.|+.|++.
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~C~k~   87 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEI-----HHTGERRYQCLACGKS   87 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHH-----HHHTCCCEEESSSCCE
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhcc-----ccCCCccccCCCCCCC
Confidence            45578899999999999999999999999999999999999999999999999999996     7999999999999999


Q ss_pred             CCChHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCcccccchhhHhHHH
Q psy2103          92 FSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEA  150 (203)
Q Consensus        92 f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~  150 (203)
                      |.+...|..|++.+++..+.                      .....|+|.+|++.|..
T Consensus        88 F~~~~~L~~H~~~hh~~~p~----------------------~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           88 FINYQFMSSHIKSVHSQDPS----------------------GDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             ESSHHHHHHHHHHHTCCCTT----------------------SSSCCEEECCCCSSCCC
T ss_pred             cCCHHHHHHHhHHhcCCCCC----------------------CCCCCeecCCCCchhhh
Confidence            99999999999999863210                      11256999999988753

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.89  E-value=6.9e-24  Score=145.83  Aligned_cols=114  Identities=32%  Similarity=0.614  Sum_probs=100.5

Q ss_pred             CCCceecc--cccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC--CCccCC
Q psy2103          18 GERPYQCE--VCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI--CDVGFS   93 (203)
Q Consensus        18 ~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~--C~~~f~   93 (203)
                      ++++|.|+  .|++.|.+...|..|++.| ++++|.|..|++.|.+...|..|++     .|.++++|.|+.  |++.|.
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~~~C~~~f~   75 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQL-----VHTGEKPFQCTFEGCGKRFS   75 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGG-----GTSCCCCEECCSTTCCCEES
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHH-----HcCCCCCeeCCCCCCcCccC
Confidence            35789999  8999999999999999998 8889999999999999999999996     788999999986  999999


Q ss_pred             ChHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCcccccc--hhhHhHHHHHHHHHHHhhccCCC
Q psy2103          94 DKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCE--SSRLIFEAWAKLQKELLSQSGYP  165 (203)
Q Consensus        94 ~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  165 (203)
                      +...|..|++.|++.                            .+|.|+  .|++.|.....|.+|+++|+++.
T Consensus        76 ~~~~l~~H~~~h~~~----------------------------~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C           76 LDFNLRTHVRIHTGD----------------------------RPYVCPFDGCNKKFAQSTNLKSHILTHAKAK  121 (124)
T ss_dssp             CHHHHHHHHHHHHCC----------------------------CCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred             CHHHHHHHHHHhCCC----------------------------CceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence            999999999998652                            568995  69999999999999999998764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=4.7e-23  Score=140.52  Aligned_cols=100  Identities=43%  Similarity=0.876  Sum_probs=95.5

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecc--cccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccC
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCE--VCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHT   78 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   78 (203)
                      +.|.+...|..|++.|.++++|.|.  .|++.|.+...|..|++.|+++++|.|..|++.|.+...|..|++     .|.
T Consensus        16 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-----~h~   90 (119)
T 2jp9_A           16 KRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTR-----THT   90 (119)
T ss_dssp             CCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH-----HHH
T ss_pred             chhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHH-----Hhc
Confidence            4799999999999999999999999  799999999999999999999999999999999999999999996     788


Q ss_pred             CCCCccc--CCCCccCCChHHHHHHHHHh
Q psy2103          79 GEKPHHC--DICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        79 ~~~~~~C--~~C~~~f~~~~~L~~H~~~~  105 (203)
                      ++++|.|  +.|++.|.+...|..|+++|
T Consensus        91 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           91 GEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             TCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999  89999999999999999865

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=1.5e-22  Score=138.94  Aligned_cols=103  Identities=32%  Similarity=0.618  Sum_probs=96.2

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHH---hcCCCCeeCcchhhhccChhHHHhhhhcCCcccc
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRI---HTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVH   77 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~---h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~   77 (203)
                      +.|.+...|..|++.|.++++|.|.+|++.|.+...|..|++.   +.++++|.|.+|++.|.+...|..|++     .|
T Consensus        15 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-----~h   89 (124)
T 2dlq_A           15 KKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMV-----SH   89 (124)
T ss_dssp             CCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHH-----HH
T ss_pred             CcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHH-----Hc
Confidence            4799999999999999999999999999999999999999996   567889999999999999999999996     78


Q ss_pred             CCCCCcccCCCCccCCChHHHHHHHHHhhhh
Q psy2103          78 TGEKPHHCDICDVGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        78 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~  108 (203)
                      .++++|.|+.|++.|.+...|..|++..|..
T Consensus        90 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           90 TGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             SSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             CCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            9999999999999999999999999876543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.86  E-value=1.9e-22  Score=138.54  Aligned_cols=102  Identities=36%  Similarity=0.764  Sum_probs=94.8

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc--hhhhccChhHHHhhhhcCCccccC
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI--CGSAFNQATHLKNHAKVGKCKVHT   78 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~   78 (203)
                      ++|.+..+|..|+++| ++++|.|.+|++.|.+...|..|++.|+++++|.|..  |++.|.+...|..|++     .|.
T Consensus        15 ~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-----~h~   88 (124)
T 1ubd_C           15 KMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-----IHT   88 (124)
T ss_dssp             CEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHH-----HHH
T ss_pred             CccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHH-----HhC
Confidence            4688999999999999 8899999999999999999999999999999999986  9999999999999996     788


Q ss_pred             CCCCcccC--CCCccCCChHHHHHHHHHhhhh
Q psy2103          79 GEKPHHCD--ICDVGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        79 ~~~~~~C~--~C~~~f~~~~~L~~H~~~~~~~  108 (203)
                      ++++|.|+  .|++.|.+...|..|+++|++.
T Consensus        89 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~  120 (124)
T 1ubd_C           89 GDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA  120 (124)
T ss_dssp             CCCCCCCCSTTCCCCCSSTTTTHHHHHHHC--
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHHccc
Confidence            99999996  5999999999999999999764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.86  E-value=9.6e-23  Score=145.44  Aligned_cols=117  Identities=27%  Similarity=0.448  Sum_probs=103.7

Q ss_pred             CCCceecccccccccChhhHHHHHHH-hcCCCC--------eeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC-
Q psy2103          18 GERPYQCEVCEKTFARHSTLWNHRRI-HTGEKP--------YRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI-   87 (203)
Q Consensus        18 ~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~-   87 (203)
                      .+.+|.|.+|++.|.+...|..|++. |.+..+        |.|..|++.|.+...|..|++     .|.++++|.|.. 
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~~   96 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-----VHTGEKPFPCPFP   96 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTH-----HHHCCCSEECSCT
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHH-----hcCCCCcccCCcC
Confidence            45679999999999999999999998 665544        789999999999999999996     788999999998 


Q ss_pred             -CCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCCCCCCCCCCcccccch--hhHhHHHHHHHHHHHhhccCC
Q psy2103          88 -CDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCES--SRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus        88 -C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  164 (203)
                       |++.|.+...|..|++.|++                            ..+|.|..  |++.|.....|.+|++.|+++
T Consensus        97 ~C~~~f~~~~~L~~H~~~h~~----------------------------~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~  148 (155)
T 2rpc_A           97 GCGKIFARSENLKIHKRTHTG----------------------------EKPFKCEFEGCDRRFANSSDRKKHMHVHTSD  148 (155)
T ss_dssp             TTCCEESCHHHHHHHHTTTCS----------------------------SCSBCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred             CCCCccCCHHHHHHHHHhhCC----------------------------CCCccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence             99999999999999988743                            25699997  999999999999999999887


Q ss_pred             Ccc
Q psy2103         165 PYH  167 (203)
Q Consensus       165 ~~~  167 (203)
                      ...
T Consensus       149 k~~  151 (155)
T 2rpc_A          149 KSG  151 (155)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=4.9e-22  Score=141.63  Aligned_cols=103  Identities=36%  Similarity=0.701  Sum_probs=97.1

Q ss_pred             CCCCChhHHHHHHHHhCCCCceeccc--ccccccChhhHHHHHHHhcCCCCeeCcc--hhhhccChhHHHhhhhcCCccc
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSI--CGSAFNQATHLKNHAKVGKCKV   76 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~   76 (203)
                      +.|.+...|..|++.|.++++|.|.+  |++.|.+...|..|+++|+++++|.|..  |++.|.+...|..|+.    +.
T Consensus        47 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~----~~  122 (155)
T 2gli_A           47 RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN----RT  122 (155)
T ss_dssp             CCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHH----HT
T ss_pred             hhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHH----Hh
Confidence            46899999999999999999999996  9999999999999999999999999998  9999999999999994    37


Q ss_pred             cCCCCCcccCC--CCccCCChHHHHHHHHHhhh
Q psy2103          77 HTGEKPHHCDI--CDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        77 ~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~~~  107 (203)
                      |.++++|.|+.  |++.|.+...|..|++.|++
T Consensus       123 H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          123 HSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             cCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            89999999998  99999999999999999874

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.84  E-value=1.9e-21  Score=135.38  Aligned_cols=97  Identities=28%  Similarity=0.436  Sum_probs=86.0

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCcccc-CC
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVH-TG   79 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~-~~   79 (203)
                      ++|...++|+.|+++|.+++||.|++|++.|.+...|..|+++|.++++|.|.+|++.|.....|..|++.+|.... ..
T Consensus        30 k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~  109 (133)
T 2lt7_A           30 RSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGD  109 (133)
T ss_dssp             CEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSS
T ss_pred             CCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCC
Confidence            57999999999999999999999999999999999999999999999999999999999999999999985543222 23


Q ss_pred             CCCcccCCCCccCCChHH
Q psy2103          80 EKPHHCDICDVGFSDKFA   97 (203)
Q Consensus        80 ~~~~~C~~C~~~f~~~~~   97 (203)
                      .++|+|..|++.|.....
T Consensus       110 ~k~~~C~~C~k~~~~~~~  127 (133)
T 2lt7_A          110 SKLYRLHPCRSLQIRQYA  127 (133)
T ss_dssp             SCCEEECCCCSSCCCCCH
T ss_pred             CCCeecCCCCchhhhccc
Confidence            467999999999876543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.84  E-value=6.9e-21  Score=128.13  Aligned_cols=91  Identities=36%  Similarity=0.692  Sum_probs=85.5

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCC
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSD   94 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~   94 (203)
                      .|.++++|.| .|++.|.+...|..|++.|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|++.|.+
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~   77 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-----IHTGIKPYECNICAKRFMW   77 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT-----TTCCCCCEECSSSCCEESC
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHH-----HcCCCCCeeCCCCcchhcC
Confidence            4788999999 999999999999999999999999999999999999999999996     7889999999999999999


Q ss_pred             hHHHHHHHHHhhhhhcC
Q psy2103          95 KFALKRHRLIHEKYARN  111 (203)
Q Consensus        95 ~~~L~~H~~~~~~~~~~  111 (203)
                      ...|..|++.|+.....
T Consensus        78 ~~~l~~H~~~~~~~~~~   94 (110)
T 2csh_A           78 RDSFHRHVTSCTKSYEA   94 (110)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccccccc
Confidence            99999999999875443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.84  E-value=3.3e-22  Score=135.68  Aligned_cols=100  Identities=16%  Similarity=0.236  Sum_probs=90.9

Q ss_pred             ChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHH--hcCCCCe-eCcchhhhc--cChhHHHhhhhcCCccccCC
Q psy2103           5 QSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRI--HTGEKPY-RCSICGSAF--NQATHLKNHAKVGKCKVHTG   79 (203)
Q Consensus         5 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~--h~~~~~~-~C~~C~~~f--~~~~~l~~H~~~~~~~~~~~   79 (203)
                      +.+.|..|+++|.++++|.|.+|++.|.+...|..|++.  |.+.+++ .|..|++.|  .....|..|++     .|.+
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~-----~H~~   77 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEG-----KEDA   77 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCC-----SCCC
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhh-----ccCC
Confidence            456788999999999999999999999999999999998  7666665 499999999  99999999996     7999


Q ss_pred             CCCcccCCCCccCCChHHHHHHHHHhhhhh
Q psy2103          80 EKPHHCDICDVGFSDKFALKRHRLIHEKYA  109 (203)
Q Consensus        80 ~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~  109 (203)
                      +++|.|+.|++.|.+...|..|++.++...
T Consensus        78 ~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           78 QKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             CcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            999999999999999999999999987653

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.83  E-value=6.7e-21  Score=135.82  Aligned_cols=103  Identities=38%  Similarity=0.706  Sum_probs=95.3

Q ss_pred             CCCCChhHHHHHHHH-hCCCCc--------eecccccccccChhhHHHHHHHhcCCCCeeCcc--hhhhccChhHHHhhh
Q psy2103           1 MLFSQSPHLKNHERI-HSGERP--------YQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI--CGSAFNQATHLKNHA   69 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~   69 (203)
                      ++|.+..+|..|++. |.++.+        |.|.+|++.|.+...|..|++.|+++++|.|..  |++.|.....|..|+
T Consensus        33 ~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~  112 (155)
T 2rpc_A           33 RTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK  112 (155)
T ss_dssp             CCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHH
T ss_pred             cccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHH
Confidence            479999999999998 666554        899999999999999999999999999999998  999999999999999


Q ss_pred             hcCCccccCCCCCcccCC--CCccCCChHHHHHHHHHhhhh
Q psy2103          70 KVGKCKVHTGEKPHHCDI--CDVGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        70 ~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~~~~  108 (203)
                      +     .|.++++|.|+.  |++.|.+...|..|+++|++.
T Consensus       113 ~-----~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~  148 (155)
T 2rpc_A          113 R-----THTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSD  148 (155)
T ss_dssp             T-----TTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred             H-----hhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence            6     789999999997  999999999999999988653

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=7.3e-21  Score=124.82  Aligned_cols=89  Identities=35%  Similarity=0.696  Sum_probs=83.7

Q ss_pred             hCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCCh
Q psy2103          16 HSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDK   95 (203)
Q Consensus        16 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~   95 (203)
                      +.++++|.|.+|++.|.+...|..|++.|+++++|.|..|++.|.....|..|++     .|.++++|.|+.|++.|.+.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~~   77 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-----IHSDERPFKCQICPYASRNS   77 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHH-----HSCCCCCEECSSSSCEESSH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHH-----HhCCCCCccCCCCCCccCCH
Confidence            4578899999999999999999999999999999999999999999999999996     78899999999999999999


Q ss_pred             HHHHHHHHHhhhhh
Q psy2103          96 FALKRHRLIHEKYA  109 (203)
Q Consensus        96 ~~L~~H~~~~~~~~  109 (203)
                      ..|..|++.|++..
T Consensus        78 ~~l~~H~~~h~~~~   91 (96)
T 2dmd_A           78 SQLTVHLRSHTGDS   91 (96)
T ss_dssp             HHHHHHHTTCCSCC
T ss_pred             HHHHHHHHHhcCCC
Confidence            99999999987643

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.82  E-value=1.7e-20  Score=119.36  Aligned_cols=82  Identities=41%  Similarity=0.878  Sum_probs=78.1

Q ss_pred             ceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHH
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKR  100 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~  100 (203)
                      ||.|.+|++.|.+...|..|++.|.++++|.|..|++.|.....|..|+.     .|.++++|.|+.|++.|.+...|..
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~~~~l~~   75 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF-----IHTGEKPHKCQVCGKAFSQSSNLIT   75 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHH-----HHHTCCCEECTTTSCEESSHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHH-----HhcCCCCCcCCCcchhhCChHHHHH
Confidence            68999999999999999999999999999999999999999999999996     7889999999999999999999999


Q ss_pred             HHHHhhh
Q psy2103         101 HRLIHEK  107 (203)
Q Consensus       101 H~~~~~~  107 (203)
                      |++.|++
T Consensus        76 H~~~H~g   82 (82)
T 2kmk_A           76 HSRKHTG   82 (82)
T ss_dssp             HHHHHC-
T ss_pred             HHHhhCC
Confidence            9999853

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.82  E-value=6e-20  Score=122.64  Aligned_cols=87  Identities=34%  Similarity=0.797  Sum_probs=82.4

Q ss_pred             CCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChH
Q psy2103          17 SGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKF   96 (203)
Q Consensus        17 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~   96 (203)
                      .++++|.|.+|++.|.+...|..|++.|+++++|.|.+|++.|.....|..|++     .|.++++|.|+.|++.|.+..
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~~~   87 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY-----IHSKEKPFKCQECGKGFCQSR   87 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGG-----GSCCCCTTSCSSSCCCCSSHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHH-----HhCCCCCeECCCcCCcccCHH
Confidence            356789999999999999999999999999999999999999999999999996     788999999999999999999


Q ss_pred             HHHHHHHHhhhh
Q psy2103          97 ALKRHRLIHEKY  108 (203)
Q Consensus        97 ~L~~H~~~~~~~  108 (203)
                      .|..|++.|.+.
T Consensus        88 ~L~~H~~~H~~~   99 (106)
T 2ee8_A           88 TLAVHKTLHMQT   99 (106)
T ss_dssp             HHHHHHHHTTSC
T ss_pred             HHHHHHHHhCCC
Confidence            999999999764

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.81  E-value=2.4e-20  Score=120.81  Aligned_cols=86  Identities=45%  Similarity=0.912  Sum_probs=79.6

Q ss_pred             CCCceecc--cccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCCh
Q psy2103          18 GERPYQCE--VCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDK   95 (203)
Q Consensus        18 ~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~   95 (203)
                      ++++|.|+  .|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++     .|.++++|.|+.|++.|.+.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~~   75 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-----THTGEKPFACDICGRKFARS   75 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH-----HHHCCCCEECTTTCCEESSH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHH-----HcCCCCCccCCCCCchhCCH
Confidence            46899998  599999999999999999999999999999999999999999996     78899999999999999999


Q ss_pred             HHHHHHHHHhhhh
Q psy2103          96 FALKRHRLIHEKY  108 (203)
Q Consensus        96 ~~L~~H~~~~~~~  108 (203)
                      ..|..|++.|++.
T Consensus        76 ~~l~~H~~~H~~~   88 (90)
T 1a1h_A           76 DERKRHTKIHLRQ   88 (90)
T ss_dssp             HHHHHHHGGGGC-
T ss_pred             HHHHHHHHHhccc
Confidence            9999999998753

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=9.8e-20  Score=119.14  Aligned_cols=85  Identities=36%  Similarity=0.710  Sum_probs=79.1

Q ss_pred             CCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCC--CCcccCCCCccCCC
Q psy2103          17 SGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE--KPHHCDICDVGFSD   94 (203)
Q Consensus        17 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~--~~~~C~~C~~~f~~   94 (203)
                      .++++|.|.+|++.|.+...|..|++.|+++++|.|..|++.|.....|..|++     .|.+.  ++|.|+.|++.|.+
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-----~h~~~~~~~~~C~~C~~~f~~   77 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-----SHDGSVGKPYICQSCGKGFSR   77 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHH-----HHCCCCCSSBCCSSSCCCBSS
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH-----HhcCCCCCceECCCccchhCC
Confidence            467899999999999999999999999999999999999999999999999997     67765  89999999999999


Q ss_pred             hHHHHHHHHHhh
Q psy2103          95 KFALKRHRLIHE  106 (203)
Q Consensus        95 ~~~L~~H~~~~~  106 (203)
                      ...|..|++..|
T Consensus        78 ~~~L~~H~~~~H   89 (95)
T 2yt9_A           78 PDHLNGHIKQVH   89 (95)
T ss_dssp             HHHHHHHHHHTS
T ss_pred             HHHHHHHHHHhc
Confidence            999999987543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=2.2e-19  Score=120.18  Aligned_cols=87  Identities=20%  Similarity=0.361  Sum_probs=79.9

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCcc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVG   91 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~   91 (203)
                      +++.|.++++|.|.+|++.|.+...|..|++.|.  ++|.|.+|++.|.....|..|+      .|.++++|.|+.|++.
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~------~H~~~~~~~C~~C~~~   78 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHE------SKCEYKKLTCLECMRT   78 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHH------HHCSTGGGEEGGGTEE
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHH------HcCCCCCccCccccch
Confidence            4567889999999999999999999999999984  5899999999999999999998      3888999999999999


Q ss_pred             CCChHHHHHHHHHhh
Q psy2103          92 FSDKFALKRHRLIHE  106 (203)
Q Consensus        92 f~~~~~L~~H~~~~~  106 (203)
                      |.+...|..|++..|
T Consensus        79 f~~~~~L~~H~~~~H   93 (107)
T 1wjp_A           79 FKSSFSIWRHQVEVH   93 (107)
T ss_dssp             CSSHHHHHHHHHHTS
T ss_pred             hCCHHHHHHHHHHHc
Confidence            999999999998444

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.75  E-value=2.7e-18  Score=113.23  Aligned_cols=84  Identities=38%  Similarity=0.734  Sum_probs=79.2

Q ss_pred             CCCceeccc--ccccccChhhHHHHHHHhcCCCCeeCc--chhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCC
Q psy2103          18 GERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCS--ICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFS   93 (203)
Q Consensus        18 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~   93 (203)
                      ..++|.|.+  |++.|.+...|..|++.|.++++|.|.  .|++.|.....|..|++     .|.++++|.|+.|++.|.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~   86 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR-----KHTGAKPFQCGVCNRSFS   86 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHH-----HHTSCCSCBCSSSCCBCS
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHH-----HhCCCCCeECCCCcCccC
Confidence            456899997  999999999999999999999999997  59999999999999996     789999999999999999


Q ss_pred             ChHHHHHHHHHhh
Q psy2103          94 DKFALKRHRLIHE  106 (203)
Q Consensus        94 ~~~~L~~H~~~~~  106 (203)
                      +...|..|++.|.
T Consensus        87 ~~~~l~~H~~~H~   99 (100)
T 2ebt_A           87 RSDHLALHMKRHQ   99 (100)
T ss_dssp             SHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHhC
Confidence            9999999999985

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=8.3e-19  Score=114.88  Aligned_cols=89  Identities=30%  Similarity=0.600  Sum_probs=81.1

Q ss_pred             hcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCC
Q psy2103          44 HTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTT  123 (203)
Q Consensus        44 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~  123 (203)
                      +.++++|.|..|++.|.+...|..|++     .|.++++|.|+.|++.|.+...|..|++.|++                
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------------   61 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMR-----CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD----------------   61 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGG-----GCCCCCSEECSSSCCEESSHHHHHHHHHHSCC----------------
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHH-----hcCCCCCEeCCCCCCccCCHHHHHHHHHHhCC----------------
Confidence            356789999999999999999999996     78889999999999999999999999998743                


Q ss_pred             CCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhhccCCC
Q psy2103         124 PPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQSGYP  165 (203)
Q Consensus       124 ~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  165 (203)
                                  ..+|.|.+|++.|.....|.+|++.|+++.
T Consensus        62 ------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   91 (96)
T 2dmd_A           62 ------------ERPFKCQICPYASRNSSQLTVHLRSHTGDS   91 (96)
T ss_dssp             ------------CCCEECSSSSCEESSHHHHHHHHTTCCSCC
T ss_pred             ------------CCCccCCCCCCccCCHHHHHHHHHHhcCCC
Confidence                        256999999999999999999999998764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.75  E-value=1.1e-19  Score=117.47  Aligned_cols=86  Identities=31%  Similarity=0.621  Sum_probs=79.3

Q ss_pred             CCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHH
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFAL   98 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L   98 (203)
                      ++||.|.+|++.|.+...|..|+++|.++++|.|..|++.|.....|..|+.     .+. ..+|.|+.|++.|.+...|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-----~h~-~~~~~c~~C~~~f~~~~~L   74 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD-----IQH-ILPILEDKVEELLSKNYHL   74 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHH-----HHT-HHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHH-----HhC-CCcchHHHHHHHHHHHhhh
Confidence            5799999999999999999999999999999999999999999999999997     344 3789999999999999999


Q ss_pred             HHHHHHhhhhhc
Q psy2103          99 KRHRLIHEKYAR  110 (203)
Q Consensus        99 ~~H~~~~~~~~~  110 (203)
                      ..|++..|+...
T Consensus        75 ~~H~~~~h~~~~   86 (88)
T 1llm_C           75 ENEVARLKKLVG   86 (88)
T ss_dssp             HHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhc
Confidence            999999887653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.74  E-value=1.6e-18  Score=111.85  Aligned_cols=82  Identities=40%  Similarity=0.758  Sum_probs=77.6

Q ss_pred             CCceeccc--ccccccChhhHHHHHHHhcCCCCeeCc--chhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCC
Q psy2103          19 ERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCS--ICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSD   94 (203)
Q Consensus        19 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~   94 (203)
                      ..+|.|.+  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+.     .|.++++|.|+.|++.|.+
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~   77 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-----KHTGHRPFQCQKCDRAFSR   77 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHH-----HHHCCCCEECSSSSCEESS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHH-----HcCCCCCccCCCCCcccCC
Confidence            46799999  999999999999999999999999997  59999999999999996     7889999999999999999


Q ss_pred             hHHHHHHHHHh
Q psy2103          95 KFALKRHRLIH  105 (203)
Q Consensus        95 ~~~L~~H~~~~  105 (203)
                      ...|..|++.|
T Consensus        78 ~~~l~~H~~~H   88 (89)
T 2wbs_A           78 SDHLALHMKRH   88 (89)
T ss_dssp             HHHHHHHGGGG
T ss_pred             HHHHHHHHHhh
Confidence            99999999876

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.73  E-value=1.5e-18  Score=110.17  Aligned_cols=82  Identities=27%  Similarity=0.620  Sum_probs=75.6

Q ss_pred             CeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCCCCCCC
Q psy2103          49 PYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQST  128 (203)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (203)
                      ||.|..|++.|.....|..|++     .|.++++|.|+.|++.|.+...|..|++.|++.                    
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------   55 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLL-----IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGE--------------------   55 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH-----HHHTCCCEECSSSCCEESSHHHHHHHHHHHHTC--------------------
T ss_pred             CccCCCCcccccCchhHHHHHH-----HcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCC--------------------
Confidence            5899999999999999999996     788899999999999999999999999998652                    


Q ss_pred             CCCCCCCCcccccchhhHhHHHHHHHHHHHhhccC
Q psy2103         129 PTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQSG  163 (203)
Q Consensus       129 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  163 (203)
                              .+|.|+.|++.|.....|.+|++.|+|
T Consensus        56 --------~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           56 --------KPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             --------CCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             --------CCCcCCCcchhhCChHHHHHHHHhhCC
Confidence                    469999999999999999999999875

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.73  E-value=4.6e-18  Score=101.52  Aligned_cols=59  Identities=39%  Similarity=0.812  Sum_probs=54.2

Q ss_pred             CCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCC
Q psy2103          18 GERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEK   81 (203)
Q Consensus        18 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   81 (203)
                      .|+||.|.+|++.|.....|..|+++|.++++|.|.+|++.|...+.|..|++     .|.+++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~-----~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLK-----VHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGG-----GGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhC-----ccCCCC
Confidence            47899999999999999999999999999999999999999999999999996     677753

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=4.9e-20  Score=124.90  Aligned_cols=101  Identities=20%  Similarity=0.251  Sum_probs=84.4

Q ss_pred             ChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCc-ccCCCCccC--CChHHHHHHHHHhhhhh
Q psy2103          33 RHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPH-HCDICDVGF--SDKFALKRHRLIHEKYA  109 (203)
Q Consensus        33 ~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~-~C~~C~~~f--~~~~~L~~H~~~~~~~~  109 (203)
                      +...|..|+++|+++++|.|..|++.|.....|..|++.+   .+.+.+++ .|+.|++.|  .....|..|++.|.+  
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~---~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~--   77 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNET---GHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDA--   77 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHT---CCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCC--
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHh---CccccCCCccCCCCCcccccccHHHHHHHhhccCC--
Confidence            3457889999999999999999999999999999999720   15555554 599999999  888888888766532  


Q ss_pred             cCccccCCCCCCCCCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhhccCC
Q psy2103         110 RNSTVNQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                                                ..+|.|++|++.|.....|.+|++.|+..
T Consensus        78 --------------------------~~~~~C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           78 --------------------------QKVLKCMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             --------------------------CSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             --------------------------CcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence                                      26799999999999999999999998755

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=6.4e-18  Score=110.41  Aligned_cols=89  Identities=29%  Similarity=0.529  Sum_probs=79.4

Q ss_pred             cCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCCC
Q psy2103          45 TGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTP  124 (203)
Q Consensus        45 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~  124 (203)
                      .++++|.|..|++.|.+...|..|++     .|.++++|.|+.|++.|.+...|..|++.|++..               
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~---------------   62 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKL-----SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV---------------   62 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHH-----HSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCC---------------
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHH-----hcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCC---------------
Confidence            46789999999999999999999996     7888999999999999999999999999986531               


Q ss_pred             CCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHh-hccCC
Q psy2103         125 PQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELL-SQSGY  164 (203)
Q Consensus       125 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  164 (203)
                                 ..+|.|..|++.|.....|.+|++ .|.+.
T Consensus        63 -----------~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           63 -----------GKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             -----------CSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             -----------CCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence                       256999999999999999999996 57654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.71  E-value=1.3e-17  Score=111.19  Aligned_cols=80  Identities=40%  Similarity=0.797  Sum_probs=75.4

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCC
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE   80 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   80 (203)
                      +.|.....|..|++.|.++++|.|.+|++.|.+...|..|++.|+++++|.|..|++.|.....|..|++     .|.++
T Consensus        25 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-----~H~~~   99 (106)
T 2ee8_A           25 RHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT-----LHMQT   99 (106)
T ss_dssp             CBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHH-----HTTSC
T ss_pred             CccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHH-----HhCCC
Confidence            4789999999999999999999999999999999999999999999999999999999999999999996     78888


Q ss_pred             CCccc
Q psy2103          81 KPHHC   85 (203)
Q Consensus        81 ~~~~C   85 (203)
                      ++|.+
T Consensus       100 ~~~~~  104 (106)
T 2ee8_A          100 SSPTA  104 (106)
T ss_dssp             CCCCC
T ss_pred             CCCcC
Confidence            88754

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.70  E-value=1.8e-17  Score=107.13  Aligned_cols=76  Identities=46%  Similarity=0.911  Sum_probs=70.2

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCC
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE   80 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   80 (203)
                      +.|.....|..|+++|.++++|.|.+|++.|.+...|..|++.|+++++|.|..|++.|.+...|..|++     .|.++
T Consensus        14 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-----~H~~~   88 (90)
T 1a1h_A           14 RRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK-----IHLRQ   88 (90)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHG-----GGGC-
T ss_pred             CccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHH-----Hhccc
Confidence            4688999999999999999999999999999999999999999999999999999999999999999997     66655


Q ss_pred             C
Q psy2103          81 K   81 (203)
Q Consensus        81 ~   81 (203)
                      +
T Consensus        89 k   89 (90)
T 1a1h_A           89 K   89 (90)
T ss_dssp             -
T ss_pred             C
Confidence            3

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=6.4e-18  Score=108.30  Aligned_cols=80  Identities=26%  Similarity=0.493  Sum_probs=73.7

Q ss_pred             HHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCC----CCeeCcchhhhccChhHHHhhhhcCCccccCCCCCc
Q psy2103           8 HLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE----KPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPH   83 (203)
Q Consensus         8 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~   83 (203)
                      .|.+|+++|.++++|.|.+|++.|.+...|..|++.++..    ++|.|..|++.|.....|..|++     .|.+++++
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~-----~h~~~~~~   76 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHAD-----NCAGPDGV   76 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHH-----HCCCCCSC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHH-----HccCCCCc
Confidence            4567999999999999999999999999999999988875    78999999999999999999996     78999999


Q ss_pred             ccCCCCccC
Q psy2103          84 HCDICDVGF   92 (203)
Q Consensus        84 ~C~~C~~~f   92 (203)
                      .|..|+..|
T Consensus        77 ~~~~~~~~~   85 (86)
T 1x6h_A           77 EGENSGPSS   85 (86)
T ss_dssp             CCCCCCCCC
T ss_pred             ccCCCCCCC
Confidence            999998865

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.70  E-value=8.9e-18  Score=108.37  Aligned_cols=83  Identities=33%  Similarity=0.564  Sum_probs=76.6

Q ss_pred             CCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhhhcCccccCCCCCCCCCCC
Q psy2103          47 EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQTTPPQ  126 (203)
Q Consensus        47 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~~~~~  126 (203)
                      +++|.|..|++.|.....|..|++     .|.++++|.|+.|++.|.+...|..|++.+++                   
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-------------------   56 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIR-----THTGEKPFACDICGRKFARSDERKRHRDIQHI-------------------   56 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH-----HHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-------------------
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHH-----HcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-------------------
Confidence            468999999999999999999996     78999999999999999999999999999874                   


Q ss_pred             CCCCCCCCCCcccccchhhHhHHHHHHHHHHHhhccC
Q psy2103         127 STPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQSG  163 (203)
Q Consensus       127 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  163 (203)
                                .+|.|..|++.|.....|..|++.+++
T Consensus        57 ----------~~~~c~~C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           57 ----------LPILEDKVEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------CcchHHHHHHHHHHHhhhHHHHHHHHH
Confidence                      458899999999999999999988654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.3e-18  Score=116.84  Aligned_cols=88  Identities=25%  Similarity=0.516  Sum_probs=80.0

Q ss_pred             HhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhhhcCccccCCCCCCC
Q psy2103          43 IHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQT  122 (203)
Q Consensus        43 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~  122 (203)
                      .|.++++|.| .|++.|.....|..|++     .|.+.++|.|+.|++.|.+...|..|++.|++               
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---------------   62 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMS-----MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG---------------   62 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHH-----HHSCCCSEECTTTSCEESSSHHHHHHHTTTCC---------------
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHH-----HcCCCcCccCCCCCcccCCHHHHHHHHHHcCC---------------
Confidence            4678899999 99999999999999996     78889999999999999999999999987743               


Q ss_pred             CCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhhccCC
Q psy2103         123 TPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                                   ..+|.|.+|++.|.....|.+|++.|+..
T Consensus        63 -------------~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           63 -------------IKPYECNICAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             -------------CCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred             -------------CCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence                         25699999999999999999999998654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.70  E-value=1.5e-17  Score=106.14  Aligned_cols=78  Identities=33%  Similarity=0.587  Sum_probs=73.5

Q ss_pred             ceec--ccccccccChhhHHHHHHHhcCCCCeeCcc--hhhhccChhHHHhhhhcCCccccCCCCCcccCC---CCccCC
Q psy2103          21 PYQC--EVCEKTFARHSTLWNHRRIHTGEKPYRCSI--CGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI---CDVGFS   93 (203)
Q Consensus        21 ~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~---C~~~f~   93 (203)
                      ||.|  ..|++.|.+...|..|+++|.++++|.|..  |++.|.....|..|++     .|.+   |.|+.   |++.|.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-----~h~~---~~C~~~~~C~~~f~   72 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-----VHAG---YPCKKDDSCSFVGK   72 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHH-----HHHS---EECCSCSSCCCEES
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHH-----HhCC---CCCCCCCCCCCccC
Confidence            6899  889999999999999999999999999998  9999999999999997     5666   99999   999999


Q ss_pred             ChHHHHHHHHHhh
Q psy2103          94 DKFALKRHRLIHE  106 (203)
Q Consensus        94 ~~~~L~~H~~~~~  106 (203)
                      +...|..|++.||
T Consensus        73 ~~~~l~~H~~~hh   85 (85)
T 2j7j_A           73 TWTLYLKHVAECH   85 (85)
T ss_dssp             SHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHhcC
Confidence            9999999999875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.3e-17  Score=111.52  Aligned_cols=93  Identities=11%  Similarity=0.259  Sum_probs=80.3

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhhhcCccccCCCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYARNSTVNQSHD  119 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~  119 (203)
                      +++.|.++++|.|.+|++.|.....|..|++     .|  .++|.|+.|++.|.....|..|+. |.+            
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-----~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~------------   66 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHER-----LC--RNAAVCPYCSLRFFSPELKQEHES-KCE------------   66 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHH-----HH--HHSBCCTTTCCCBSSHHHHHHHHH-HCS------------
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHH-----HC--CCCccCCCCCCccCCHHHHHHHHH-cCC------------
Confidence            3567889999999999999999999999997     45  368999999999999999999995 532            


Q ss_pred             CCCCCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHh-hccCCCccc
Q psy2103         120 SQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELL-SQSGYPYHK  168 (203)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~  168 (203)
                                      ..+|.|.+|++.|.....|.+|++ .|.++....
T Consensus        67 ----------------~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~  100 (107)
T 1wjp_A           67 ----------------YKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAP  100 (107)
T ss_dssp             ----------------TGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCC
T ss_pred             ----------------CCCccCccccchhCCHHHHHHHHHHHcCCCCCCC
Confidence                            267999999999999999999997 787765443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=6.5e-17  Score=101.96  Aligned_cols=72  Identities=29%  Similarity=0.667  Sum_probs=67.8

Q ss_pred             CCCCceeccc--ccccccChhhHHHHHH-HhcCCCCeeCcc--hhhhccChhHHHhhhhcCCccccCCCCCcccCCCCcc
Q psy2103          17 SGERPYQCEV--CEKTFARHSTLWNHRR-IHTGEKPYRCSI--CGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVG   91 (203)
Q Consensus        17 ~~~~~~~C~~--C~~~f~~~~~L~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~   91 (203)
                      .++++|.|..  |++.|.+...|..|++ .|.++++|.|..  |++.|.....|..|++     .|.++++|.|+.|++.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C~k~   77 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK-----LHSDTRDYICEFSGPS   77 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHH-----HHHTSCCCSCCSSSCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHH-----HhCCCCCeeCCCCCCC
Confidence            4678999998  9999999999999999 799999999999  9999999999999996     7899999999999999


Q ss_pred             CC
Q psy2103          92 FS   93 (203)
Q Consensus        92 f~   93 (203)
                      |+
T Consensus        78 F~   79 (79)
T 2dlk_A           78 SG   79 (79)
T ss_dssp             CC
T ss_pred             CC
Confidence            85

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=3.3e-16  Score=102.68  Aligned_cols=66  Identities=14%  Similarity=0.271  Sum_probs=46.1

Q ss_pred             CCCChhHHHHHHHHhCCCCceecccccccc-cChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhh
Q psy2103           2 LFSQSPHLKNHERIHSGERPYQCEVCEKTF-ARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNH   68 (203)
Q Consensus         2 ~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   68 (203)
                      +|...+.|..|++.|.++++|.|++|++.| .+...|..|+++| ++++|.|.+|++.|.....|..|
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H   81 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYH   81 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHH
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHH
Confidence            355556666777666666777777777777 6777777777777 66777777777777777777777

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.63  E-value=2.4e-16  Score=101.54  Aligned_cols=83  Identities=30%  Similarity=0.582  Sum_probs=75.5

Q ss_pred             CCCeeCcc--hhhhccChhHHHhhhhcCCccccCCCCCcccC--CCCccCCChHHHHHHHHHhhhhhcCccccCCCCCCC
Q psy2103          47 EKPYRCSI--CGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD--ICDVGFSDKFALKRHRLIHEKYARNSTVNQSHDSQT  122 (203)
Q Consensus        47 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~~~~~  122 (203)
                      ..+|.|..  |++.|.+...|..|++     .|.++++|.|+  .|++.|.+...|..|++.|.+.              
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~--------------   63 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLR-----THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH--------------   63 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHT-----TSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCC--------------
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHH-----hcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCC--------------
Confidence            45799999  9999999999999996     78899999997  5999999999999999988652              


Q ss_pred             CCCCCCCCCCCCCCcccccchhhHhHHHHHHHHHHHhhcc
Q psy2103         123 TPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQKELLSQS  162 (203)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  162 (203)
                                    .+|.|+.|++.|.....|..|++.|.
T Consensus        64 --------------~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           64 --------------RPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             --------------CCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             --------------CCccCCCCCcccCCHHHHHHHHHhhC
Confidence                          56999999999999999999999873

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=4.1e-16  Score=97.91  Aligned_cols=66  Identities=48%  Similarity=0.925  Sum_probs=62.1

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCccc
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC   85 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C   85 (203)
                      .+.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|++.|.....|..|++     .|.++++|.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-----~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR-----VHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGG-----GSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHH-----HhCCCCCCCC
Confidence            45678999999999999999999999999999999999999999999999999996     7999999987

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.62  E-value=1.1e-16  Score=95.53  Aligned_cols=57  Identities=32%  Similarity=0.780  Sum_probs=54.3

Q ss_pred             CCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhh
Q psy2103          47 EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        47 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~  108 (203)
                      |+||.|.+|++.|.....|..|++     .|+++++|.|+.|++.|.....|..|+++|.+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~-----~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRR-----AHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHH-----HHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHH-----HhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            789999999999999999999996     899999999999999999999999999998664

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=7.3e-17  Score=106.25  Aligned_cols=71  Identities=18%  Similarity=0.281  Sum_probs=38.3

Q ss_pred             ChhhHHHHHHHhcCCCCeeCcchhhhcc-ChhHHHhhhhcCCccccCC-CCCcccCCCCccCCChHHHHHHHHHhhhh
Q psy2103          33 RHSTLWNHRRIHTGEKPYRCSICGSAFN-QATHLKNHAKVGKCKVHTG-EKPHHCDICDVGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        33 ~~~~L~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~~~~~~~~~-~~~~~C~~C~~~f~~~~~L~~H~~~~~~~  108 (203)
                      ....+..|++.|.++++|.|.+|++.|. ....|..|++     .|.+ +++|.|..|++.|.+...|..|++.|++.
T Consensus         8 ~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~-----~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~   80 (98)
T 2gqj_A            8 PGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHME-----VCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA   80 (98)
T ss_dssp             CCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHH-----HHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred             CCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHH-----HHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence            3344445555555555555555555555 5555555553     3444 45566666666666666666666655543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.61  E-value=1e-15  Score=100.69  Aligned_cols=70  Identities=44%  Similarity=0.928  Sum_probs=67.0

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecc--cccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhh
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCE--VCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      +.|.....|..|++.|.++++|.|.  .|++.|.+...|..|++.|+++++|.|..|++.|.....|..|++
T Consensus        25 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   96 (100)
T 2ebt_A           25 KVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK   96 (100)
T ss_dssp             CEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHH
T ss_pred             CcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHH
Confidence            4688999999999999999999997  599999999999999999999999999999999999999999997

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.1e-15  Score=100.99  Aligned_cols=70  Identities=21%  Similarity=0.336  Sum_probs=63.1

Q ss_pred             hCCCCceecccccccccChhhHHHHHH-Hh---cCCCCeeCcchhhhccChhHHHhh-hhcCCccccCCCCCcccCCCCc
Q psy2103          16 HSGERPYQCEVCEKTFARHSTLWNHRR-IH---TGEKPYRCSICGSAFNQATHLKNH-AKVGKCKVHTGEKPHHCDICDV   90 (203)
Q Consensus        16 h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~~~~~~~~~~C~~C~~   90 (203)
                      -.|++||.|.+|++.|.....|..|++ .|   .++++|.|..|++.|.....|..| ++     .|.++++|.|..+..
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r-----~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLK-----YHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHH-----TSTTCCCEEEEECCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHH-----hcCCCCCeeCCcccC
Confidence            357899999999999999999999998 58   568899999999999999999999 64     899999999987543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.57  E-value=2.4e-15  Score=93.59  Aligned_cols=64  Identities=45%  Similarity=1.084  Sum_probs=57.4

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCc
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPH   83 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~   83 (203)
                      .+.++++|.|.+|++.|.+...|..|++.|.++++|.|..|++.|.....|..|++     .|.++++|
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR-----IHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHH-----HHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHH-----hcCCCCCC
Confidence            46678899999999999999999999999999999999999999999999999996     78887765

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.57  E-value=2.4e-15  Score=96.05  Aligned_cols=62  Identities=24%  Similarity=0.516  Sum_probs=52.7

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCC
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE   80 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   80 (203)
                      .+.+.++|.|++|++.|.+...|..|+++|+++++|.|.+|++.|.....|..|++    +.|+++
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~----~~H~~E   83 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHIN----KCHPSE   83 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHH----TTCTTC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCc----ccCcCC
Confidence            34566779999999999999999999999999999999999999999999999986    466654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=3.7e-16  Score=98.11  Aligned_cols=63  Identities=29%  Similarity=0.618  Sum_probs=46.3

Q ss_pred             HHHHHHHhCCCCceecccccccccChhhHHHHHH-HhcCC-CCeeCcchhhhccChhHHHhhhhc
Q psy2103           9 LKNHERIHSGERPYQCEVCEKTFARHSTLWNHRR-IHTGE-KPYRCSICGSAFNQATHLKNHAKV   71 (203)
Q Consensus         9 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~   71 (203)
                      |.+|+++|.++++|.|.+|++.|.+...|..|++ .|.++ ++|.|..|++.|.....|..|++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~   67 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK   67 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHH
Confidence            3457777777778888888888888888888876 45543 677777777777777777777763

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=7.4e-16  Score=101.37  Aligned_cols=78  Identities=15%  Similarity=0.279  Sum_probs=70.0

Q ss_pred             CCChhHHHHHHHHhCCCCceeccccccccc-ChhhHHHHHHHhcC-CCCeeCcchhhhccChhHHHhhhhcCCccccCCC
Q psy2103           3 FSQSPHLKNHERIHSGERPYQCEVCEKTFA-RHSTLWNHRRIHTG-EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE   80 (203)
Q Consensus         3 F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~L~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   80 (203)
                      +.....+..|+++|.++++|.|.+|++.|. +...|..|+++|++ +++|.|.+|++.|.....|..|++     .|.++
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~-----~h~~~   80 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTM-----AEHSA   80 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHH-----HHSCS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHH-----HHcCC
Confidence            455667889999999999999999999999 99999999999998 899999999999999999999996     66677


Q ss_pred             CCccc
Q psy2103          81 KPHHC   85 (203)
Q Consensus        81 ~~~~C   85 (203)
                      +++.-
T Consensus        81 kp~~~   85 (98)
T 2gqj_A           81 KPSDA   85 (98)
T ss_dssp             CSSCC
T ss_pred             CCCCC
Confidence            66533

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.56  E-value=3.1e-15  Score=95.24  Aligned_cols=69  Identities=30%  Similarity=0.555  Sum_probs=65.1

Q ss_pred             CCCCChhHHHHHHHHhCCCCceeccc--ccccccChhhHHHHHHHhcCCCCeeCcc---hhhhccChhHHHhhhhcC
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSI---CGSAFNQATHLKNHAKVG   72 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~---C~~~f~~~~~l~~H~~~~   72 (203)
                      +.|.....|..|+++|.++++|.|++  |++.|.+...|..|+++|++   |.|..   |++.|.....|..|++.+
T Consensus        11 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~h   84 (85)
T 2j7j_A           11 KAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAEC   84 (85)
T ss_dssp             CEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHHC
T ss_pred             cccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            46889999999999999999999999  99999999999999999998   99999   999999999999999743

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=5.3e-17  Score=100.66  Aligned_cols=72  Identities=26%  Similarity=0.394  Sum_probs=66.3

Q ss_pred             ChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcc
Q psy2103           5 QSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHH   84 (203)
Q Consensus         5 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~   84 (203)
                      +.+.|..|+++|.++++|.|.+|++.|.+...|..       +++|.|..|++.|.....|..|++     .|.++++|.
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~-----~H~~~~~~~   69 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEG-----NESGKKTSG   69 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSS-----CCCCCCCSS
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHH-----hhcCCCCCC
Confidence            35678899999999999999999999999999887       678999999999999999999996     799999999


Q ss_pred             cCCC
Q psy2103          85 CDIC   88 (203)
Q Consensus        85 C~~C   88 (203)
                      |+.|
T Consensus        70 C~~C   73 (73)
T 2ctu_A           70 PSSG   73 (73)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9987

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.54  E-value=3.2e-15  Score=88.12  Aligned_cols=54  Identities=41%  Similarity=0.701  Sum_probs=42.7

Q ss_pred             CCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhc
Q psy2103          18 GERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKV   71 (203)
Q Consensus        18 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   71 (203)
                      |+++|.|.+|++.|.+...|..|+++|+++++|.|..|++.|.....|..|++.
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   54 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLER   54 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHH
Confidence            457888888888888888888888888888888888888888888888888863

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.9e-15  Score=93.55  Aligned_cols=57  Identities=56%  Similarity=1.076  Sum_probs=39.6

Q ss_pred             HHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhh
Q psy2103          14 RIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        14 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      ++|.++++|.|.+|++.|.+...|..|++.|.++++|.|.+|++.|.....|..|++
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   63 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR   63 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHH
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            356666777777777777777777777777776666777777777777777776665

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=9.1e-16  Score=96.31  Aligned_cols=70  Identities=34%  Similarity=0.594  Sum_probs=62.3

Q ss_pred             hHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCC-CCcccCCCCccCCChHHHHHHHHHhhhhh
Q psy2103          36 TLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE-KPHHCDICDVGFSDKFALKRHRLIHEKYA  109 (203)
Q Consensus        36 ~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~-~~~~C~~C~~~f~~~~~L~~H~~~~~~~~  109 (203)
                      +|..|+++|.++++|.|.+|++.|.....|..|++    ..|.++ ++|.|+.|++.|.+...|..|++.+|+..
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~----~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHIL----QKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHH----HHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHH----HhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            35678999999999999999999999999999996    246664 89999999999999999999999988654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=9.1e-16  Score=98.11  Aligned_cols=69  Identities=32%  Similarity=0.496  Sum_probs=60.8

Q ss_pred             hHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCC---CCCcccCCCCccCCChHHHHHHHHHhhhh
Q psy2103          36 TLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTG---EKPHHCDICDVGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        36 ~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~---~~~~~C~~C~~~f~~~~~L~~H~~~~~~~  108 (203)
                      +|..|+++|.++++|.|..|++.|.....|..|++.    .+..   +++|.|+.|++.|.+...|..|++.|++.
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~----~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   73 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKR----YHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP   73 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHH----TTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHH----hcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCC
Confidence            467899999999999999999999999999999973    2333   27899999999999999999999999764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=4.5e-15  Score=91.34  Aligned_cols=55  Identities=29%  Similarity=0.660  Sum_probs=32.9

Q ss_pred             hCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhh
Q psy2103          16 HSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        16 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      |.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|++.|.....|..|++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~   58 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK   58 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHH
Confidence            4455566666666666666666666666655555666666666666555655554

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=8e-15  Score=92.23  Aligned_cols=60  Identities=25%  Similarity=0.602  Sum_probs=56.8

Q ss_pred             CCCCChhHHHHHHH-HhCCCCceeccc--ccccccChhhHHHHHHHhcCCCCeeCcchhhhcc
Q psy2103           1 MLFSQSPHLKNHER-IHSGERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFN   60 (203)
Q Consensus         1 ~~F~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~   60 (203)
                      +.|....+|+.|++ .|.++++|.|.+  |++.|.+...|..|+++|+++++|.|.+|++.|.
T Consensus        17 ~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           17 RIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            46889999999999 799999999999  9999999999999999999999999999999884

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.52  E-value=6.4e-16  Score=106.58  Aligned_cols=83  Identities=16%  Similarity=0.325  Sum_probs=72.4

Q ss_pred             CCCceeccccccccc------ChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCcc
Q psy2103          18 GERPYQCEVCEKTFA------RHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVG   91 (203)
Q Consensus        18 ~~~~~~C~~C~~~f~------~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~   91 (203)
                      .++.+.|++|+..|.      ....|..|+ .|+++++|.|..|++.|.....|..|++     .|  +++|.|+.|++.
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~-----~H--~~~~~C~~C~k~  109 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIR-----YT--EHTKVCPVCKKE  109 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHH-----HT--CCCCBCTTTCCB
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHH-----HC--CCCCCCCCCCcc
Confidence            345688999888776      556677776 6888999999999999999999999996     56  788999999999


Q ss_pred             CCChHHHHHHHHHhhhh
Q psy2103          92 FSDKFALKRHRLIHEKY  108 (203)
Q Consensus        92 f~~~~~L~~H~~~~~~~  108 (203)
                      |.+...|..|++.|++.
T Consensus       110 f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          110 FTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CSSHHHHHHHHHHTTCC
T ss_pred             cCCHHHHHHHHHHHCCc
Confidence            99999999999999875

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=1.3e-14  Score=91.09  Aligned_cols=65  Identities=26%  Similarity=0.477  Sum_probs=50.7

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcC---CCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCc
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTG---EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPH   83 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~   83 (203)
                      +|.++++|.|.+|++.|.+...|..|+++|.+   +++|.|..|++.|.....|..|++.    .|.+..+.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~----~H~~~~~~   68 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK----SHPALLLA   68 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHH----TSTTTSSC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHH----hCCCCCCC
Confidence            36788888888888888888888888888875   6788888888888888888888852    45555443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=3.6e-15  Score=90.62  Aligned_cols=57  Identities=28%  Similarity=0.649  Sum_probs=39.7

Q ss_pred             HHhCCCCceecccccccccChhhHHHHHHH-h-cCCCCeeCcchhhhccChhHHHhhhh
Q psy2103          14 RIHSGERPYQCEVCEKTFARHSTLWNHRRI-H-TGEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        14 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      ++|.++++|.|.+|++.|.+...|..|++. | .++++|.|+.|++.|.....|..|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~   61 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK   61 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHH
Confidence            346667777777777777777777777766 4 36667777777777777777777765

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=2.3e-14  Score=93.85  Aligned_cols=74  Identities=16%  Similarity=0.197  Sum_probs=67.8

Q ss_pred             cccccChhhHHHHHHHhcCCCCeeCcchhhhc-cChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHH-HHHh
Q psy2103          28 EKTFARHSTLWNHRRIHTGEKPYRCSICGSAF-NQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRH-RLIH  105 (203)
Q Consensus        28 ~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H-~~~~  105 (203)
                      ...|.....|..|++.+.++++|.|..|++.| .....|..|++     .| ++++|.|..|++.|.....|..| ++.|
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~-----~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H   86 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHME-----NC-KQEMFTCHHCGKQLRSLAGMKYHVMANH   86 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHH-----HH-CCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHH-----HH-CCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence            44677888999999999999999999999999 99999999996     78 89999999999999999999999 7777


Q ss_pred             hh
Q psy2103         106 EK  107 (203)
Q Consensus       106 ~~  107 (203)
                      .+
T Consensus        87 ~~   88 (96)
T 2ctd_A           87 NS   88 (96)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.2e-14  Score=90.01  Aligned_cols=64  Identities=45%  Similarity=0.816  Sum_probs=59.1

Q ss_pred             HHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhhh
Q psy2103          41 RRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYA  109 (203)
Q Consensus        41 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~  109 (203)
                      .++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|++.|.+...|..|++.|++..
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQR-----VHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHH-----GGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHH-----hcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            456889999999999999999999999996     7889999999999999999999999999997643

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.47  E-value=2.5e-14  Score=98.50  Aligned_cols=66  Identities=21%  Similarity=0.401  Sum_probs=60.9

Q ss_pred             CCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhh
Q psy2103           2 LFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus         2 ~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      .|.....|..|+ .|.+++||.|.+|++.|.....|..|+++|  +++|.|..|++.|.....|..|++
T Consensus        56 ~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~  121 (129)
T 2wbt_A           56 LLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVC  121 (129)
T ss_dssp             GTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHH
T ss_pred             ccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHH
Confidence            456777888888 588899999999999999999999999998  789999999999999999999997

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=4.6e-14  Score=83.97  Aligned_cols=57  Identities=47%  Similarity=0.958  Sum_probs=49.6

Q ss_pred             CceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCC
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE   80 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   80 (203)
                      +||.|.+|++.|.+...|..|+++|+++++|.|..|++.|.....|..|++    +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~----~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ----KIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHT----TTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH----HHcCCc
Confidence            478999999999999999999999999999999999999999999999975    255544

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.47  E-value=5.1e-14  Score=82.86  Aligned_cols=50  Identities=36%  Similarity=0.719  Sum_probs=45.7

Q ss_pred             ceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhh
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      ||.|.+|++.|.+...|..|+++|.++++|.|..|++.|.....|..|++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   50 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK   50 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHH
Confidence            58899999999999999999999999999999999999999999999986

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=5.7e-14  Score=86.31  Aligned_cols=62  Identities=19%  Similarity=0.455  Sum_probs=57.6

Q ss_pred             HhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhhh
Q psy2103          43 IHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYA  109 (203)
Q Consensus        43 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~  109 (203)
                      +|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|++.|.+...|..|++.|++..
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHER-----IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHG-----GGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHH-----HcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            3678899999999999999999999996     7899999999999999999999999999998754

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=1.7e-14  Score=87.63  Aligned_cols=62  Identities=26%  Similarity=0.489  Sum_probs=56.5

Q ss_pred             HHhcCCCCeeCcchhhhccChhHHHhhhhcCCcccc-CCCCCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          42 RIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVH-TGEKPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        42 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~-~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      ++|.++++|.|..|++.|.....|..|+..    .| .++++|.|+.|++.|.+...|..|++.+|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~----~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVT----SHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHH----HSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHH----HcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            467889999999999999999999999972    26 588999999999999999999999999876

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.43  E-value=5e-14  Score=82.89  Aligned_cols=57  Identities=37%  Similarity=0.696  Sum_probs=50.2

Q ss_pred             CCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          46 GEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        46 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      ++++|.|..|++.|.....|..|++     .|.++++|.|+.|++.|.+...|..|++.||+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLR-----THTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHH-----HHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHH-----HcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            4578999999999999999999996     78999999999999999999999999999863

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=3.2e-13  Score=83.52  Aligned_cols=63  Identities=38%  Similarity=0.841  Sum_probs=53.6

Q ss_pred             HHHHHHH-HhCCCCceecc--cccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhh
Q psy2103           8 HLKNHER-IHSGERPYQCE--VCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus         8 ~l~~H~~-~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      .+..|++ +|.++++|.|+  .|++.|.+...|..|++.|.++++|.|..|++.|.....|..|++
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR   70 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHT
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHH
Confidence            3445533 47788999997  599999999999999999999999999999999999999999986

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=3.4e-13  Score=84.57  Aligned_cols=61  Identities=23%  Similarity=0.453  Sum_probs=55.1

Q ss_pred             hcCCCCeeCcchhhhccChhHHHhhhhcCCccccCC---CCCcccCCCCccCCChHHHHHHHHHhhhhh
Q psy2103          44 HTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTG---EKPHHCDICDVGFSDKFALKRHRLIHEKYA  109 (203)
Q Consensus        44 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~---~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~  109 (203)
                      |.++++|.|.+|++.|.....|..|++     .|.+   +++|.|+.|++.|.....|..|++.+|...
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~-----~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQR-----KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHH-----HHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHH-----HhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            678999999999999999999999996     6664   789999999999999999999997776544

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.37  E-value=3.8e-13  Score=83.49  Aligned_cols=61  Identities=39%  Similarity=0.793  Sum_probs=56.4

Q ss_pred             HhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhh
Q psy2103          43 IHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        43 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~  108 (203)
                      .+.++++|.|..|++.|.....|..|++     .|.++++|.|+.|++.|.+...|..|++.|.+.
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~-----~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   71 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKT-----VHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE   71 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHH-----HHCCCCSEECTTTCCEESCHHHHHHHHHHHCCS
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHH-----HcCCCCCEECCCCCchhCCHHHHHHHHHhcCCC
Confidence            4567889999999999999999999996     789999999999999999999999999998653

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.37  E-value=4.1e-13  Score=85.60  Aligned_cols=60  Identities=18%  Similarity=0.397  Sum_probs=53.8

Q ss_pred             HHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhh
Q psy2103          42 RIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        42 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      ..+.+.++|.|++|++.|.....|..|++     .|.++++|.|+.|++.|.+...|..|++..|
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~-----~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H   80 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLR-----LLHAAQVFPCKYCPATFYSSPGLTRHINKCH   80 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHH-----TTSCSSSEECTTSSCEESSHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhh-----hccCCCccCCCCCCCEeCCHHHHHHhCcccC
Confidence            34556778999999999999999999996     7899999999999999999999999986544

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=1.9e-13  Score=76.02  Aligned_cols=44  Identities=39%  Similarity=0.623  Sum_probs=39.3

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678889999999999999999999999999999999999877

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.2e-13  Score=76.53  Aligned_cols=45  Identities=42%  Similarity=0.704  Sum_probs=39.6

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999877

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.3e-13  Score=77.47  Aligned_cols=45  Identities=40%  Similarity=0.754  Sum_probs=37.7

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            367778888888888888888888888888888888888888876

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=7e-13  Score=82.90  Aligned_cols=52  Identities=44%  Similarity=0.860  Sum_probs=50.0

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeC
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC   52 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   52 (203)
                      +.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus        26 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           26 KSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4789999999999999999999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.34  E-value=1.5e-13  Score=77.27  Aligned_cols=45  Identities=40%  Similarity=0.770  Sum_probs=40.1

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467788899999999999999999999999999999999999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.34  E-value=2.3e-13  Score=76.50  Aligned_cols=44  Identities=41%  Similarity=0.705  Sum_probs=39.4

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67788889999999999999999999999999999999999877

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.2e-13  Score=75.86  Aligned_cols=45  Identities=38%  Similarity=0.641  Sum_probs=39.1

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467788888899999999999999999999999988888888876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.5e-13  Score=76.31  Aligned_cols=45  Identities=40%  Similarity=0.713  Sum_probs=40.1

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999877

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.33  E-value=5.9e-13  Score=78.17  Aligned_cols=55  Identities=31%  Similarity=0.640  Sum_probs=51.3

Q ss_pred             CeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhh
Q psy2103          49 PYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~  108 (203)
                      ||.|..|++.|.....|..|++     .|.++++|.|+.|++.|.+...|..|++.|++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIR-----THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH-----HTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHH-----hcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            5899999999999999999996     789999999999999999999999999988653

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.2e-13  Score=76.52  Aligned_cols=45  Identities=38%  Similarity=0.697  Sum_probs=39.2

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            367788888899999999999999999999999988888988876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.4e-13  Score=76.36  Aligned_cols=45  Identities=40%  Similarity=0.629  Sum_probs=40.6

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477788899999999999999999999999999999999999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.1e-13  Score=75.93  Aligned_cols=45  Identities=47%  Similarity=0.790  Sum_probs=39.9

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999877

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3e-13  Score=75.96  Aligned_cols=45  Identities=42%  Similarity=0.794  Sum_probs=38.6

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467788888888999999999888888888888888888888876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.5e-13  Score=76.36  Aligned_cols=45  Identities=42%  Similarity=0.612  Sum_probs=40.7

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            477788999999999999999999999999999999999999877

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3e-13  Score=75.95  Aligned_cols=45  Identities=36%  Similarity=0.608  Sum_probs=40.3

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467788899999999999999999999999999999999999877

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.8e-13  Score=76.10  Aligned_cols=45  Identities=49%  Similarity=0.773  Sum_probs=39.8

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            467788889999999999999999999999999999999999876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.6e-13  Score=76.26  Aligned_cols=45  Identities=47%  Similarity=0.781  Sum_probs=40.1

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467788899999999999999999999999999999999999876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3e-13  Score=75.92  Aligned_cols=45  Identities=44%  Similarity=0.733  Sum_probs=37.5

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|++|++.|.+...|..|+++|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367778888888888888888888888888888888888888876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.32  E-value=2.7e-13  Score=76.18  Aligned_cols=45  Identities=42%  Similarity=0.721  Sum_probs=37.5

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366778888888888888888888888888888888888888876

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.32  E-value=9.9e-13  Score=85.45  Aligned_cols=62  Identities=31%  Similarity=0.506  Sum_probs=53.5

Q ss_pred             CceecccccccccChhhHHHHHHH-hcCCCC--------eeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRI-HTGEKP--------YRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      ..|.|.+|++.|.+...|..|++. |.++++        |.|..|++.|.....|..|++     .|.++++|.|+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-----VHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHH-----HHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHH-----hcCCCCCCCCC
Confidence            347799999999999999999988 877776        889999999999999999986     78888889886

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.8e-13  Score=76.10  Aligned_cols=45  Identities=36%  Similarity=0.671  Sum_probs=39.3

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467788888899999999999999999999999999989998876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.2e-13  Score=75.82  Aligned_cols=45  Identities=31%  Similarity=0.498  Sum_probs=39.0

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467788888899999999999999999999999988888888876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.4e-13  Score=76.32  Aligned_cols=45  Identities=44%  Similarity=0.750  Sum_probs=37.1

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778888888888888888888888888888888888888876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.3e-13  Score=76.46  Aligned_cols=44  Identities=45%  Similarity=0.749  Sum_probs=35.3

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|++|++.|.+...|..|+++|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            66677788888888888888888888888888888888888776

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=4e-13  Score=75.44  Aligned_cols=44  Identities=41%  Similarity=0.710  Sum_probs=38.7

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56778888899999999999999999999999998888998877

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.31  E-value=2.2e-13  Score=76.48  Aligned_cols=45  Identities=40%  Similarity=0.613  Sum_probs=34.5

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356677777778888888888888888888777777777777766

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=4.4e-13  Score=75.29  Aligned_cols=44  Identities=27%  Similarity=0.377  Sum_probs=39.6

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788889999999999999999999999999999999999877

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.3e-13  Score=76.49  Aligned_cols=44  Identities=41%  Similarity=0.663  Sum_probs=34.1

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777788888888888888888888877777777777765

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.2e-13  Score=76.56  Aligned_cols=44  Identities=43%  Similarity=0.738  Sum_probs=34.3

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            56677777788888888888888888888878877777877766

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.5e-13  Score=76.31  Aligned_cols=44  Identities=45%  Similarity=0.737  Sum_probs=35.2

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677788888888888888888888888888888888888776

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.8e-13  Score=76.13  Aligned_cols=44  Identities=45%  Similarity=0.734  Sum_probs=34.8

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56677778888888888888888888888888888888888776

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.5e-13  Score=75.71  Aligned_cols=45  Identities=47%  Similarity=0.730  Sum_probs=40.0

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999877

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=2.5e-13  Score=76.31  Aligned_cols=45  Identities=38%  Similarity=0.534  Sum_probs=35.5

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366677778888888888888888888888888888888888776

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=2.6e-13  Score=76.21  Aligned_cols=44  Identities=41%  Similarity=0.726  Sum_probs=35.1

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677778888888888888888888888888888888888776

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.7e-13  Score=76.19  Aligned_cols=45  Identities=42%  Similarity=0.749  Sum_probs=39.6

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999877

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.5e-13  Score=75.68  Aligned_cols=45  Identities=44%  Similarity=0.789  Sum_probs=35.5

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366777788888888888888888888888888888888888766

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.1e-13  Score=75.95  Aligned_cols=44  Identities=41%  Similarity=0.650  Sum_probs=35.8

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56677888888888888888888888888888888888888776

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.4e-13  Score=75.78  Aligned_cols=44  Identities=36%  Similarity=0.692  Sum_probs=39.7

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778899999999999999999999999999999999999887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.4e-13  Score=75.32  Aligned_cols=44  Identities=41%  Similarity=0.599  Sum_probs=40.0

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56788899999999999999999999999999999999999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.30  E-value=2.4e-13  Score=76.35  Aligned_cols=44  Identities=32%  Similarity=0.586  Sum_probs=34.7

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|++|++.|.....|..|+++|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            56677777888888888888888888888888888878888766

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.8e-13  Score=76.04  Aligned_cols=45  Identities=40%  Similarity=0.648  Sum_probs=35.4

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366677778888888888888888888888888888888888766

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.9e-13  Score=76.04  Aligned_cols=44  Identities=39%  Similarity=0.564  Sum_probs=36.3

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56678888888888888888888888888888888888888776

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.30  E-value=3.3e-13  Score=75.74  Aligned_cols=44  Identities=41%  Similarity=0.745  Sum_probs=34.4

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777788888888888888888888888877777877766

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=1.7e-12  Score=78.68  Aligned_cols=52  Identities=31%  Similarity=0.572  Sum_probs=47.6

Q ss_pred             CCCCceecccccccccChhhHHHHHHHhcCCCCeeCc-chhhhccChhHHHhhhh
Q psy2103          17 SGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS-ICGSAFNQATHLKNHAK   70 (203)
Q Consensus        17 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~   70 (203)
                      -+++||.|.+|++.|. ...|..|+++ .++++|.|. .|++.|.....|..|++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~   58 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLK   58 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHH
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHH
Confidence            4678999999999999 9999999998 899999999 99999999999999996

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=3.3e-13  Score=75.76  Aligned_cols=45  Identities=36%  Similarity=0.488  Sum_probs=35.4

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366677778888888888888888888888888888888888766

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.8e-13  Score=76.08  Aligned_cols=45  Identities=44%  Similarity=0.764  Sum_probs=36.0

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366777788888888888888888888888888888888888776

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3e-13  Score=75.96  Aligned_cols=44  Identities=36%  Similarity=0.662  Sum_probs=34.7

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            56677777888888888888888888888888888888888766

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.1e-13  Score=75.89  Aligned_cols=45  Identities=42%  Similarity=0.790  Sum_probs=35.6

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366777788888888888888888888888888888888888764

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.29  E-value=5e-13  Score=75.06  Aligned_cols=44  Identities=39%  Similarity=0.637  Sum_probs=36.6

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678888888888888888888888888888888888888776

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.6e-13  Score=76.20  Aligned_cols=44  Identities=36%  Similarity=0.700  Sum_probs=31.7

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777665

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=9.7e-13  Score=73.86  Aligned_cols=44  Identities=43%  Similarity=0.704  Sum_probs=39.1

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66788889999999999999999999999999999999999864

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=2e-12  Score=76.70  Aligned_cols=54  Identities=39%  Similarity=0.817  Sum_probs=49.5

Q ss_pred             CCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHH-HHhh
Q psy2103          48 KPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHR-LIHE  106 (203)
Q Consensus        48 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~-~~~~  106 (203)
                      ++|.|..|++.|.....|..|++     .|.++++|.|+.|++.|.+...|..|+ +.|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYR-----SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH-----TTTSSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcCcCCCCccccCCHHHHHHHHH-----HhCCCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            47999999999999999999996     788999999999999999999999997 4553

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.27  E-value=1.1e-12  Score=76.26  Aligned_cols=50  Identities=18%  Similarity=0.311  Sum_probs=44.1

Q ss_pred             CCCCChhHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCe
Q psy2103           1 MLFSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPY   50 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~   50 (203)
                      +.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|+++++|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            46888888889999999999999999999999999999999999988876

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.26  E-value=3e-12  Score=74.46  Aligned_cols=46  Identities=35%  Similarity=0.680  Sum_probs=36.1

Q ss_pred             hCCCCceecccccccccChhhHHHHHH-HhcCCCCeeCcchhhhccC
Q psy2103          16 HSGERPYQCEVCEKTFARHSTLWNHRR-IHTGEKPYRCSICGSAFNQ   61 (203)
Q Consensus        16 h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~C~~~f~~   61 (203)
                      |.++++|.|.+|++.|.....|..|++ +|.++++|.|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            566778888888888888888888876 7778888888888877764

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.26  E-value=6.7e-12  Score=77.26  Aligned_cols=55  Identities=40%  Similarity=0.734  Sum_probs=48.7

Q ss_pred             hCCCCceeccc--ccccccChhhHHHHHHHhcCCCCeeCcc--hhhhccChhHHHhhhh
Q psy2103          16 HSGERPYQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCSI--CGSAFNQATHLKNHAK   70 (203)
Q Consensus        16 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~   70 (203)
                      +...++|.|.+  |++.|.....|..|+++|.++++|.|.+  |++.|.....|..|++
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            44667899988  9999999999999999999999999965  9999999999999985

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=7.9e-13  Score=74.49  Aligned_cols=44  Identities=39%  Similarity=0.688  Sum_probs=36.2

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHH-HhcCCCCeeCcch
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRR-IHTGEKPYRCSIC   55 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~C   55 (203)
                      |+++|.++++|.|.+|++.|.....|..|++ +|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            5667888888888888888888888888888 8888888888776

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.23  E-value=2.1e-12  Score=72.43  Aligned_cols=44  Identities=43%  Similarity=0.750  Sum_probs=38.5

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888999999999999999999999999999999998864

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.2e-12  Score=72.40  Aligned_cols=43  Identities=47%  Similarity=0.753  Sum_probs=38.5

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            6778889999999999999999999999999999999999864

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.23  E-value=2e-12  Score=70.98  Aligned_cols=42  Identities=38%  Similarity=0.696  Sum_probs=35.0

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            456788888888888888888888888888888888888874

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.6e-12  Score=72.03  Aligned_cols=44  Identities=41%  Similarity=0.793  Sum_probs=39.2

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46778889999999999999999999999999999999999864

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=3.8e-12  Score=78.59  Aligned_cols=58  Identities=34%  Similarity=0.736  Sum_probs=53.5

Q ss_pred             HhcCCCCeeCc--chhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHh
Q psy2103          43 IHTGEKPYRCS--ICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        43 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      .+.++++|.|+  .|++.|.....|..|++     .|.++++|.|+.|++.|.+...|..|++.|
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~-----~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIR-----IHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHH-----HHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHH-----hhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            46788899998  59999999999999996     788999999999999999999999999876

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.6e-12  Score=71.99  Aligned_cols=44  Identities=39%  Similarity=0.680  Sum_probs=38.8

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778889999999999999999999999999999999998864

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=8e-12  Score=82.38  Aligned_cols=56  Identities=20%  Similarity=0.314  Sum_probs=51.1

Q ss_pred             CCCCChhHHHHHHH-Hh---CCCCceecccccccccChhhHHHH-HHHhcCCCCeeCcchh
Q psy2103           1 MLFSQSPHLKNHER-IH---SGERPYQCEVCEKTFARHSTLWNH-RRIHTGEKPYRCSICG   56 (203)
Q Consensus         1 ~~F~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~~~~~C~~C~   56 (203)
                      +.|...+.|..|++ .|   .+++||.|.+|++.|.+...|..| +++|.++++|.|.++.
T Consensus        26 k~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           26 FQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            46889999999998 58   568999999999999999999999 8999999999999854

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.7e-12  Score=71.91  Aligned_cols=44  Identities=48%  Similarity=0.806  Sum_probs=38.8

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36778889999999999999999999999999999999998864

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3e-12  Score=70.27  Aligned_cols=42  Identities=31%  Similarity=0.613  Sum_probs=36.5

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566788889999999999999999999999999998888874

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.21  E-value=1.6e-13  Score=82.35  Aligned_cols=57  Identities=18%  Similarity=0.448  Sum_probs=46.1

Q ss_pred             HHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhh
Q psy2103           9 LKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNH   68 (203)
Q Consensus         9 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   68 (203)
                      |..|+++|.+++||.|++|++.|.....|.   ++|.++++|.|..|++.|.....+..+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            346778888889999999999998887776   788888889999999988877665443

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.7e-12  Score=70.61  Aligned_cols=43  Identities=37%  Similarity=0.714  Sum_probs=37.7

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4677888899999999999999999999999999998888884

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.9e-12  Score=71.80  Aligned_cols=44  Identities=41%  Similarity=0.738  Sum_probs=36.3

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888863

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.5e-12  Score=72.12  Aligned_cols=42  Identities=55%  Similarity=0.841  Sum_probs=34.1

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            666777888888888888888888888888888888888876

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.4e-12  Score=71.59  Aligned_cols=44  Identities=36%  Similarity=0.594  Sum_probs=38.6

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      +|+++|.++++|.|.+|++.|.....|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778889999999999999999999999999999999998863

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.5e-12  Score=72.13  Aligned_cols=43  Identities=49%  Similarity=0.811  Sum_probs=34.2

Q ss_pred             HHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          13 ERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        13 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3467778888888888888888888888888888888888776

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.19  E-value=8.5e-12  Score=69.56  Aligned_cols=42  Identities=36%  Similarity=0.608  Sum_probs=37.8

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchh
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICG   56 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~   56 (203)
                      .|.++++|.|.+|++.|.....|..|+++|+++++|.|+.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            577889999999999999999999999999999999999885

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.4e-12  Score=72.17  Aligned_cols=43  Identities=47%  Similarity=0.797  Sum_probs=34.7

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            5667788888888888888888888888888888888888763

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.2e-12  Score=71.67  Aligned_cols=42  Identities=48%  Similarity=0.757  Sum_probs=35.1

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            667788888888888888888888888888888888888886

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.7e-12  Score=71.43  Aligned_cols=44  Identities=41%  Similarity=0.699  Sum_probs=38.5

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778888999999999999999999999999999999998864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.6e-12  Score=72.01  Aligned_cols=42  Identities=38%  Similarity=0.728  Sum_probs=33.8

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777888888888888888888888888888888888776

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=4.5e-12  Score=70.33  Aligned_cols=43  Identities=23%  Similarity=0.566  Sum_probs=37.1

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      +|+++|.+++||.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            3677888889999999999999999999999999888888874

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.7e-12  Score=71.42  Aligned_cols=42  Identities=40%  Similarity=0.754  Sum_probs=36.4

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      |+++|.++++|.|.+|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788888899999999999999999999888888888886

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3e-12  Score=71.76  Aligned_cols=43  Identities=49%  Similarity=0.803  Sum_probs=33.6

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            5667777788888888888888888888888888887777753

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.1e-12  Score=71.66  Aligned_cols=44  Identities=43%  Similarity=0.777  Sum_probs=36.3

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888863

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.4e-12  Score=71.51  Aligned_cols=43  Identities=47%  Similarity=0.831  Sum_probs=34.4

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3666777888888888888888888888888888888888776

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.2e-12  Score=71.18  Aligned_cols=43  Identities=40%  Similarity=0.692  Sum_probs=38.0

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4677888899999999999999999999999999999888886

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.4e-12  Score=71.55  Aligned_cols=43  Identities=44%  Similarity=0.752  Sum_probs=34.4

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5667778888888888888888888888888888888887763

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.7e-12  Score=71.96  Aligned_cols=43  Identities=40%  Similarity=0.574  Sum_probs=37.5

Q ss_pred             HHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          13 ERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        13 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      +++|.++++|.|.+|++.|.+...|..|+++|+++++|.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4567888899999999999999999999999998889999877

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.18  E-value=5.8e-12  Score=69.07  Aligned_cols=41  Identities=29%  Similarity=0.552  Sum_probs=36.5

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeC
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC   52 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   52 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            46678889999999999999999999999999999998887

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.7e-12  Score=71.98  Aligned_cols=42  Identities=48%  Similarity=0.822  Sum_probs=33.5

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            566777788888888888888888888888888888888775

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3e-12  Score=71.76  Aligned_cols=44  Identities=43%  Similarity=0.766  Sum_probs=34.8

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36667778888888888888888888888888888888888763

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.17  E-value=2.5e-11  Score=78.69  Aligned_cols=53  Identities=36%  Similarity=0.458  Sum_probs=49.7

Q ss_pred             CCCCChhHHHHHHHH-hCCCCc--------eecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103           1 MLFSQSPHLKNHERI-HSGERP--------YQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus         1 ~~F~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      +.|....+|.+|++. |.++++        |.|.+|++.|.+...|..|+++|+++++|.|.
T Consensus        33 k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           33 RTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            479999999999998 888877        99999999999999999999999999999996

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.5e-12  Score=71.51  Aligned_cols=43  Identities=49%  Similarity=0.862  Sum_probs=33.8

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      +|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3666777788888888888888888888888888888887775

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.9e-12  Score=71.88  Aligned_cols=42  Identities=40%  Similarity=0.793  Sum_probs=31.8

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            456677777777777777777777777777777777777775

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.4e-12  Score=70.80  Aligned_cols=42  Identities=31%  Similarity=0.655  Sum_probs=33.4

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566777888888888888888888888888888888777774

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.3e-12  Score=71.57  Aligned_cols=42  Identities=48%  Similarity=0.814  Sum_probs=33.1

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777778888888888888888888888888877777775

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.16  E-value=1.1e-11  Score=70.20  Aligned_cols=42  Identities=31%  Similarity=0.577  Sum_probs=31.5

Q ss_pred             hCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhh
Q psy2103          16 HSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGS   57 (203)
Q Consensus        16 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~   57 (203)
                      |.++++|.|.+|++.|.+...|..|+++|+++++|.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            456677777777777777777777777777777777777763

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.3e-12  Score=69.66  Aligned_cols=41  Identities=37%  Similarity=0.695  Sum_probs=36.5

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeC
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC   52 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   52 (203)
                      |+++|.+++||.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56678889999999999999999999999999999988887

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.1e-12  Score=71.22  Aligned_cols=44  Identities=41%  Similarity=0.652  Sum_probs=39.1

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      .|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778899999999999999999999999999999999998863

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.8e-12  Score=70.56  Aligned_cols=43  Identities=35%  Similarity=0.582  Sum_probs=34.3

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      .|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3666777888888888888888888888888888888888774

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.5e-14  Score=89.35  Aligned_cols=63  Identities=22%  Similarity=0.445  Sum_probs=54.8

Q ss_pred             ChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          33 RHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        33 ~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      +...|..|++.|.++++|.|..|++.|.....|..            +++|.|+.|++.|.+...|..|++.|.+
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------------~~~~~C~~C~~~f~~~~~l~~H~~~H~~   64 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------------RKTPMCEKCRKDSCQEAALNKDEGNESG   64 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC------------SSSCCCHHHHHTCSCCCSSCCCSSCCCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc------------CCCCCCCCCChhhcCHHHHHHHHHhhcC
Confidence            34678889999999999999999999999887654            5789999999999999999999877643

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=5.2e-12  Score=70.78  Aligned_cols=42  Identities=36%  Similarity=0.499  Sum_probs=33.2

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcC-CCCeeCc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTG-EKPYRCS   53 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~~C~   53 (203)
                      |+++|.++++|.|.+|++.|.....|..|+++|.+ +++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56677777888888888888888888888888887 7777775

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.2e-12  Score=70.15  Aligned_cols=41  Identities=37%  Similarity=0.777  Sum_probs=30.2

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeC
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC   52 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   52 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            55667777777777777777777777777777777777766

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.7e-12  Score=70.56  Aligned_cols=42  Identities=43%  Similarity=0.778  Sum_probs=33.7

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            666777888888888888888888888888888888888775

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.7e-12  Score=70.59  Aligned_cols=43  Identities=30%  Similarity=0.613  Sum_probs=38.2

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677888999999999999999999999999999999898885

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=5.8e-12  Score=69.87  Aligned_cols=43  Identities=19%  Similarity=0.417  Sum_probs=33.0

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      .|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            3566777777888888888888888888888888777777773

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=9.6e-12  Score=69.00  Aligned_cols=42  Identities=24%  Similarity=0.443  Sum_probs=37.3

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            566788899999999999999999999999999999999884

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=6e-12  Score=70.52  Aligned_cols=42  Identities=45%  Similarity=0.943  Sum_probs=32.8

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455677778888888888888888888888888887777775

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.13  E-value=8.8e-12  Score=69.77  Aligned_cols=45  Identities=36%  Similarity=0.574  Sum_probs=41.7

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR-----SHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGG-----GSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHH-----HhCCCCCCCCCCC
Confidence            47788999999999999999999999999996     8999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7.2e-12  Score=69.48  Aligned_cols=43  Identities=26%  Similarity=0.476  Sum_probs=36.4

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      .|+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667788888899999999999999999998888888888873

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=4.6e-12  Score=69.55  Aligned_cols=41  Identities=41%  Similarity=0.762  Sum_probs=31.0

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeC
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC   52 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   52 (203)
                      |+++|.++++|.|.+|++.|.+...|..|+++|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45567777777888888888777777777777777777766

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9e-12  Score=69.78  Aligned_cols=45  Identities=40%  Similarity=0.780  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      +|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQR-----IHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHG-----GGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHH-----HhcCCCCCCCCCC
Confidence            47788999999999999999999999999996     7999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=9e-12  Score=69.77  Aligned_cols=45  Identities=42%  Similarity=0.786  Sum_probs=41.4

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRG-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGG-----GTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhh-----hcCCCCCCCCCCC
Confidence            46788999999999999999999999999996     8999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.2e-11  Score=69.28  Aligned_cols=45  Identities=38%  Similarity=0.655  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQK-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGG-----GTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHH-----HhCCCCCCCCCCC
Confidence            37788999999999999999999999999996     7899999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=9.5e-12  Score=69.70  Aligned_cols=45  Identities=31%  Similarity=0.590  Sum_probs=41.6

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      +|+++|.++++|.|.+|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHT-----TTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHH-----HhCCCCCCCCCCC
Confidence            47788999999999999999999999999996     7999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.1e-11  Score=69.41  Aligned_cols=45  Identities=42%  Similarity=0.781  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQL-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHT-----TTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            46788999999999999999999999999996     7999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.3e-11  Score=69.09  Aligned_cols=45  Identities=40%  Similarity=0.775  Sum_probs=41.9

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|+.     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQR-----VHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGG-----GGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            47888999999999999999999999999996     7999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.3e-11  Score=69.14  Aligned_cols=45  Identities=40%  Similarity=0.765  Sum_probs=41.6

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQR-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHT-----TTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHh-----hcCCCCCCCCCCC
Confidence            47788999999999999999999999999996     7999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.1e-11  Score=69.34  Aligned_cols=45  Identities=40%  Similarity=0.668  Sum_probs=41.1

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      +|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQK-----IHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHH-----HTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            47788999999999999999999999999996     7899999999886

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.12  E-value=9.8e-12  Score=69.62  Aligned_cols=45  Identities=40%  Similarity=0.741  Sum_probs=41.4

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      +|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQK-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHT-----GGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHH-----hcCCCCCCCCCCC
Confidence            47788999999999999999999999999996     7899999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.2e-11  Score=69.14  Aligned_cols=45  Identities=40%  Similarity=0.741  Sum_probs=41.6

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQR-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHG-----GGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHH-----hcCCCCCCCCCCC
Confidence            47788999999999999999999999999996     7999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.11  E-value=8.8e-12  Score=69.82  Aligned_cols=45  Identities=36%  Similarity=0.610  Sum_probs=41.4

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQN-----VHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGG-----GGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHH-----HcCCCCCcCCCCC
Confidence            47788999999999999999999999999996     7999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=9.7e-12  Score=69.59  Aligned_cols=45  Identities=44%  Similarity=0.820  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQR-----IHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHG-----GGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            47788999999999999999999999999996     8999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=8.6e-12  Score=69.81  Aligned_cols=45  Identities=40%  Similarity=0.734  Sum_probs=41.0

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQR-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHH-----HHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHH-----HhCCCCCCCCCCC
Confidence            47788999999999999999999999999996     7899999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.1e-11  Score=69.43  Aligned_cols=45  Identities=36%  Similarity=0.623  Sum_probs=41.2

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      +|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQR-----IHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHT-----TTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            47788999999999999999999999999996     7899999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=1.1e-11  Score=69.29  Aligned_cols=45  Identities=31%  Similarity=0.470  Sum_probs=41.6

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      +|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQR-----VHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHT-----TTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHH-----HhCCCCCCCCCCC
Confidence            47788999999999999999999999999996     8999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.1e-11  Score=69.44  Aligned_cols=45  Identities=44%  Similarity=0.824  Sum_probs=41.8

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQR-----VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGG-----GGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            47788999999999999999999999999996     8999999999987

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=1.6e-11  Score=74.29  Aligned_cols=55  Identities=22%  Similarity=0.398  Sum_probs=50.5

Q ss_pred             cCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC-CCCccCCChHHHHHHHHHhh
Q psy2103          45 TGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD-ICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        45 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~-~C~~~f~~~~~L~~H~~~~~  106 (203)
                      -++++|.|..|++.|. ...|..|++     . .++++|.|+ .|++.|.....|..|++.|-
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~-----~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQY-----Q-CPRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHH-----H-CSSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHH-----H-cCCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            3567899999999999 999999996     6 889999999 99999999999999998874

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.7e-11  Score=68.61  Aligned_cols=45  Identities=44%  Similarity=0.819  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQ-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHH-----TTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHH-----HhCCCCCCCCCCC
Confidence            47788999999999999999999999999996     7999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.6e-11  Score=68.75  Aligned_cols=44  Identities=41%  Similarity=0.715  Sum_probs=40.7

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHT-----TTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHH-----HhCCCCCCCCCCC
Confidence            6788999999999999999999999999996     7899999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=9.1e-12  Score=69.71  Aligned_cols=45  Identities=38%  Similarity=0.671  Sum_probs=40.5

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHER-----LHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHH-----HCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHH-----hcCCCCCCCCCCC
Confidence            47788899999999999999999999999996     7889999999887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.10  E-value=1.7e-11  Score=68.58  Aligned_cols=45  Identities=42%  Similarity=0.729  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQR-----VHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGG-----GGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHH-----HhCCCCCCCCCCC
Confidence            47788999999999999999999999999996     7999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.1e-11  Score=68.76  Aligned_cols=44  Identities=34%  Similarity=0.547  Sum_probs=39.3

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQ-----THAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHH-----HHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHH-----HhCCCCCCCCCCC
Confidence            5677889999999999999999999999996     7889999999887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.8e-11  Score=68.53  Aligned_cols=44  Identities=43%  Similarity=0.679  Sum_probs=40.9

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHM-----VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGG-----GGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHH-----HhCCCCCCCCCCC
Confidence            6778999999999999999999999999996     7999999999987

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.6e-11  Score=68.13  Aligned_cols=42  Identities=36%  Similarity=0.611  Sum_probs=35.2

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeC
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC   52 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   52 (203)
                      .|+++|.++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            366778888888888888888888888888888888888876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.2e-11  Score=69.17  Aligned_cols=45  Identities=31%  Similarity=0.510  Sum_probs=41.1

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQR-----THVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHH-----HCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHH-----HhCCCCCCCCCCC
Confidence            47788999999999999999999999999996     7899999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.7e-11  Score=68.64  Aligned_cols=44  Identities=43%  Similarity=0.766  Sum_probs=41.0

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK-----VHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHT-----TSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHH-----hhCCCCCCCCCCC
Confidence            6778999999999999999999999999996     7999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=9.9e-12  Score=69.60  Aligned_cols=45  Identities=44%  Similarity=0.832  Sum_probs=40.5

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWR-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHH-----HHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHH-----HHCCCCCCCCCCC
Confidence            46778899999999999999999999999996     7889999999887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1e-11  Score=69.56  Aligned_cols=45  Identities=38%  Similarity=0.696  Sum_probs=40.3

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQR-----THAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHH-----HHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            46778899999999999999999999999996     7889999999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.9e-11  Score=68.42  Aligned_cols=44  Identities=41%  Similarity=0.682  Sum_probs=40.6

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMR-----THSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHT-----TTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHH-----HhCCCCCCCCCCC
Confidence            6778999999999999999999999999996     7899999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.2e-11  Score=69.30  Aligned_cols=45  Identities=40%  Similarity=0.727  Sum_probs=40.0

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|.+|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSM-----VHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHH-----HTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            46778889999999999999999999999986     7889999999887

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.09  E-value=9.7e-12  Score=69.66  Aligned_cols=45  Identities=51%  Similarity=0.838  Sum_probs=39.3

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      +|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQR-----VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHH-----HHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            46778888999999999999999999999986     7888899999877

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.8e-11  Score=68.55  Aligned_cols=45  Identities=47%  Similarity=0.801  Sum_probs=40.9

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      +|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQK-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHT-----TTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            47788999999999999999999999999996     7899999999875

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=8.6e-12  Score=69.85  Aligned_cols=45  Identities=42%  Similarity=0.801  Sum_probs=39.8

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      +|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQK-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHH-----HHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHH-----hcCCCCCCCCCCC
Confidence            46778899999999999999999999999986     7888999999887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.09  E-value=1.4e-11  Score=69.04  Aligned_cols=44  Identities=41%  Similarity=0.735  Sum_probs=39.5

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHK-----LHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHH-----HHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            6778899999999999999999999999996     7889999999887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.1e-11  Score=69.42  Aligned_cols=45  Identities=40%  Similarity=0.676  Sum_probs=39.3

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      +|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK-----CHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHH-----HHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHH-----hcCCCCCCCCCCC
Confidence            46778888899999999999999999999986     7888899999887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=9.1e-12  Score=69.75  Aligned_cols=45  Identities=40%  Similarity=0.663  Sum_probs=39.8

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      +|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHH-----HHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            46778889999999999999999999999986     7888999999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.7e-11  Score=68.60  Aligned_cols=45  Identities=44%  Similarity=0.821  Sum_probs=41.0

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQR-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHT-----TTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHH-----hcCCCCCCCCCCC
Confidence            47788999999999999999999999999996     7899999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.8e-11  Score=68.54  Aligned_cols=44  Identities=34%  Similarity=0.606  Sum_probs=40.3

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR-----VHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGG-----GGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHH-----hcCCCCCCCCCCC
Confidence            6778899999999999999999999999996     7899999999987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=3.1e-11  Score=67.56  Aligned_cols=42  Identities=45%  Similarity=0.652  Sum_probs=36.6

Q ss_pred             HHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          13 ERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        13 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      +++|.++++|.|.+|++.|.....|..|+++|+++++|.|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            456888899999999999999999999999999999998863

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.7e-11  Score=68.58  Aligned_cols=45  Identities=42%  Similarity=0.814  Sum_probs=40.8

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRR-----IHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHH-----HHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHH-----HcCCCCCCCCCCC
Confidence            46788999999999999999999999999996     7899999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=9.7e-12  Score=69.66  Aligned_cols=45  Identities=33%  Similarity=0.586  Sum_probs=39.3

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLK-----RHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHH-----HHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHH-----HHcCCCCCCCCCC
Confidence            46778889999999999999999999999986     7888899999877

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=2.3e-11  Score=68.07  Aligned_cols=44  Identities=32%  Similarity=0.657  Sum_probs=40.3

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQR-----SHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHH-----HSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHH-----HhCCCCCCCCCCC
Confidence            6778899999999999999999999999996     7899999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=1e-10  Score=67.85  Aligned_cols=48  Identities=42%  Similarity=0.824  Sum_probs=43.4

Q ss_pred             HhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCC
Q psy2103          43 IHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSD   94 (203)
Q Consensus        43 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~   94 (203)
                      .|.++++|.|..|++.|.....|..|++    +.|.++++|.|+.|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~----~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIK----QVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHH----HTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHH----HhcCCCCCccCCCCCCCCCC
Confidence            3577899999999999999999999985    27899999999999999986

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.07  E-value=5.9e-11  Score=65.42  Aligned_cols=40  Identities=23%  Similarity=0.347  Sum_probs=35.5

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      +|.++++|.|.+|++.|.....|..|+++|+++++|.|.+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            5778899999999999999999999999999999998864

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2e-11  Score=68.03  Aligned_cols=41  Identities=39%  Similarity=0.723  Sum_probs=32.9

Q ss_pred             HHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcc
Q psy2103          14 RIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSI   54 (203)
Q Consensus        14 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~   54 (203)
                      ++|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            45777888888888888888888888888888888888763

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1e-11  Score=69.54  Aligned_cols=45  Identities=44%  Similarity=0.801  Sum_probs=40.4

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRR-----VHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTH-----HHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHH-----hcCCCCCCCCCCC
Confidence            46778899999999999999999999999996     7889999999887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.06  E-value=3.2e-11  Score=67.47  Aligned_cols=45  Identities=31%  Similarity=0.547  Sum_probs=41.1

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR-----MHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHG-----GGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            36778999999999999999999999999996     7999999999987

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2.5e-11  Score=68.49  Aligned_cols=43  Identities=37%  Similarity=0.627  Sum_probs=32.9

Q ss_pred             HHHhCCCCceecc--cccccccChhhHHHHHHHhcCCCCeeCcch
Q psy2103          13 ERIHSGERPYQCE--VCEKTFARHSTLWNHRRIHTGEKPYRCSIC   55 (203)
Q Consensus        13 ~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C   55 (203)
                      .++|.++++|.|.  .|++.|.....|..|+++|.++++|.|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3457777788887  788888888888888888887777877766

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=2.4e-11  Score=67.99  Aligned_cols=44  Identities=27%  Similarity=0.375  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQV-----LHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHH-----HHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHH-----HhCCCCCCCCCCC
Confidence            6778899999999999999999999999996     7889999999887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2.2e-11  Score=68.14  Aligned_cols=45  Identities=40%  Similarity=0.722  Sum_probs=40.7

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQR-----THTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHH-----HHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHH-----HcCCCCCCCCCCC
Confidence            36778899999999999999999999999996     7899999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.04  E-value=7.6e-11  Score=72.43  Aligned_cols=57  Identities=39%  Similarity=0.768  Sum_probs=51.0

Q ss_pred             hcCCCCeeCcc--hhhhccChhHHHhhhhcCCccccCCCCCcccCC--CCccCCChHHHHHHHHHh
Q psy2103          44 HTGEKPYRCSI--CGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI--CDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        44 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~  105 (203)
                      ....++|.|..  |++.|.....|..|++     .|.++++|.|++  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTR-----THTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHH-----HHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHH-----hcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34567899998  9999999999999996     799999999975  999999999999998654

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.9e-11  Score=67.34  Aligned_cols=46  Identities=43%  Similarity=0.636  Sum_probs=40.4

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      .|+++|.++++|.|..|++.|.....|..|++    ..|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~----~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWR----YYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHT----TTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhH----hhcCCCCCCCCCCC
Confidence            36778899999999999999999999999994    16888999999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2e-11  Score=68.35  Aligned_cols=44  Identities=36%  Similarity=0.723  Sum_probs=36.9

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQR-----LHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHH-----HHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            5667888888888888888888888888886     6888888888876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.9e-11  Score=67.65  Aligned_cols=44  Identities=36%  Similarity=0.650  Sum_probs=38.7

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQR-----VHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHH-----HHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHH-----HHcCCCCCCCCCC
Confidence            5677888999999999999999999999986     7888899999887

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.2e-10  Score=63.43  Aligned_cols=38  Identities=42%  Similarity=0.751  Sum_probs=30.4

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCCCCeeC
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC   52 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   52 (203)
                      +|.++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            46777888888888888888888888888888877776

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.01  E-value=5.3e-12  Score=75.61  Aligned_cols=53  Identities=15%  Similarity=0.409  Sum_probs=46.9

Q ss_pred             HHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHH
Q psy2103          37 LWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFA   97 (203)
Q Consensus        37 L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~   97 (203)
                      |..|+++|.++++|.|+.|++.|.....|.   .     .|.++++|.|+.|++.|....+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~-----~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---L-----FDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---H-----EETTTTEEBCSSSCCBCEECTT
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---h-----hcCCCCCEECCCCCCccccCcc
Confidence            456888999999999999999999988886   3     7899999999999999987654

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.3e-11  Score=66.55  Aligned_cols=44  Identities=43%  Similarity=0.810  Sum_probs=38.5

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLR-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHH-----HHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHH-----HhCCCCCCCCCCC
Confidence            6778888999999999999999999999986     7888899999865

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.99  E-value=9.3e-11  Score=64.14  Aligned_cols=42  Identities=38%  Similarity=0.730  Sum_probs=36.6

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQR-----THAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHG-----GGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHH-----hcCCCCCCCCC
Confidence            5667888999999999999999999999986     78888999885

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.97  E-value=8.3e-11  Score=68.20  Aligned_cols=51  Identities=24%  Similarity=0.366  Sum_probs=41.4

Q ss_pred             cccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCc
Q psy2103          28 EKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPH   83 (203)
Q Consensus        28 ~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~   83 (203)
                      ++.|.....|..|+++|.++++|.|..|++.|.....|..|+.     .|.++++|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLE-----LRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHH-----HHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHH-----HhccCCCC
Confidence            4567777888888888888888888888888888888888885     67777765

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=9.7e-11  Score=65.43  Aligned_cols=44  Identities=45%  Similarity=0.827  Sum_probs=37.8

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRG-----IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHT-----TTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHH-----hhCCCCCCCCCC
Confidence            46778888999999999999999999999985     788889998864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.5e-10  Score=64.70  Aligned_cols=44  Identities=41%  Similarity=0.714  Sum_probs=39.2

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQR-----IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHT-----TTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHH-----HhCCCCCCCCCC
Confidence            46778999999999999999999999999996     789999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.2e-10  Score=64.95  Aligned_cols=44  Identities=45%  Similarity=0.818  Sum_probs=39.3

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRR-----IHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGG-----GTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHH-----hcCCCCCcCCCC
Confidence            46788999999999999999999999999996     789999999974

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2.4e-11  Score=75.62  Aligned_cols=61  Identities=23%  Similarity=0.379  Sum_probs=51.3

Q ss_pred             hHHHHHHHHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhh
Q psy2103           7 PHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus         7 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      ..|..|+++|.+++++.|..|+..|. ...|..|+ .+.+++++.|..|++.|. ...|..|+.
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~   63 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPE   63 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHH
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHH
Confidence            45677888888889999999999994 88899998 888888999999998877 488888886

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.4e-10  Score=64.71  Aligned_cols=44  Identities=41%  Similarity=0.724  Sum_probs=38.3

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQK-----IHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHT-----TTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHH-----HhCCCCCCCCCC
Confidence            36778889999999999999999999999986     788899999874

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.6e-10  Score=64.48  Aligned_cols=43  Identities=40%  Similarity=0.763  Sum_probs=39.3

Q ss_pred             HHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          41 RRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        41 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      +++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQR-----IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHT-----TTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHH-----HhCCCCCCCCCCC
Confidence            457889999999999999999999999996     7999999999987

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.3e-10  Score=64.84  Aligned_cols=44  Identities=48%  Similarity=0.854  Sum_probs=39.0

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR-----IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHT-----TTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHH-----HcCCCCCCCCCC
Confidence            46778899999999999999999999999996     788999999864

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.4e-10  Score=63.43  Aligned_cols=42  Identities=31%  Similarity=0.570  Sum_probs=32.2

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQK-----MHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHH-----HTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHH-----HhCCCCCCCCC
Confidence            4566777788888888888888888888875     67777777774

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.7e-10  Score=64.40  Aligned_cols=44  Identities=43%  Similarity=0.713  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQR-----THTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHH-----TSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHH-----HhCCCCCCCCCC
Confidence            46778889999999999999999999999996     788899999864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.7e-10  Score=64.42  Aligned_cols=44  Identities=41%  Similarity=0.700  Sum_probs=38.2

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQR-----IHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHG-----GGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHh-----HhCCCCCCCCCC
Confidence            36778889999999999999999999999986     788889998864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.3e-10  Score=64.92  Aligned_cols=44  Identities=43%  Similarity=0.835  Sum_probs=38.1

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQR-----VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGG-----GGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHH-----hcCCCCCCCCCC
Confidence            46778889999999999999999999999986     788889998864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.94  E-value=1.2e-10  Score=65.03  Aligned_cols=44  Identities=39%  Similarity=0.784  Sum_probs=35.5

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQR-----IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHH-----HHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHH-----HhCCCCCCCCCC
Confidence            36677888888888888888888888888885     678888888864

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.7e-10  Score=64.50  Aligned_cols=43  Identities=44%  Similarity=0.875  Sum_probs=38.0

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHS-----VHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTT-----TTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHH-----hcCCCCCCCCCC
Confidence            5678889999999999999999999999986     788899999874

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1e-10  Score=65.32  Aligned_cols=44  Identities=41%  Similarity=0.736  Sum_probs=36.3

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQA-----THSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHH-----HHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHH-----HcCCCCCCCCCC
Confidence            36677888888888888888888888888885     788888888864

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.5e-10  Score=63.94  Aligned_cols=43  Identities=33%  Similarity=0.685  Sum_probs=36.9

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQK-----THSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHT-----TSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHH-----HcCCCCCCCCC
Confidence            36778888999999999999999999999986     78888888884

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=6.9e-10  Score=62.54  Aligned_cols=42  Identities=33%  Similarity=0.581  Sum_probs=38.9

Q ss_pred             hcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCc
Q psy2103          44 HTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDV   90 (203)
Q Consensus        44 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~   90 (203)
                      +.++++|.|.+|++.|.....|..|++     .|.++++|.|++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKL-----SHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGG-----GSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHH-----hcCCCCCccCCCCCC
Confidence            567889999999999999999999996     899999999999985

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=1.2e-10  Score=65.06  Aligned_cols=43  Identities=40%  Similarity=0.711  Sum_probs=35.2

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRR-----SHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHH-----HHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHH-----hcCCCCCCCCCC
Confidence            6677888888888888888888888888885     788888888864

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.2e-10  Score=65.02  Aligned_cols=44  Identities=45%  Similarity=0.815  Sum_probs=37.9

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQR-----VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGG-----GGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHH-----HcCCCCCCCCCC
Confidence            46778888999999999999999999999986     788889998864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.7e-10  Score=64.43  Aligned_cols=44  Identities=43%  Similarity=0.836  Sum_probs=38.3

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQR-----VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHT-----TTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHH-----HcCCCCCCCCCC
Confidence            46778889999999999999999999999985     788899999864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.2e-10  Score=64.96  Aligned_cols=44  Identities=41%  Similarity=0.760  Sum_probs=37.0

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQR-----IHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHG-----GGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHH-----HhCCCCCCCCCC
Confidence            46777888888999999999999999999985     788888888864

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=1.4e-10  Score=64.07  Aligned_cols=43  Identities=26%  Similarity=0.545  Sum_probs=35.8

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER-----THARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHH-----HCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhH-----hcCCCCCCCCC
Confidence            46777888888999999999988888988886     78888888874

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.5e-10  Score=64.65  Aligned_cols=44  Identities=45%  Similarity=0.837  Sum_probs=37.5

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRG-----IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHT-----TTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhH-----hcCCCCCCCCCC
Confidence            36778888899999999999999999999985     788888998864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.8e-10  Score=64.27  Aligned_cols=44  Identities=43%  Similarity=0.794  Sum_probs=38.1

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQV-----IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHT-----TTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHH-----HhCCCCCCCCCC
Confidence            46778889999999999999999999999986     788889998864

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.4e-10  Score=63.98  Aligned_cols=43  Identities=40%  Similarity=0.689  Sum_probs=34.2

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      .|+++|.++++|.|..|++.|.....|..|+.     .|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQR-----THTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHH-----HTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHH-----HhCCCCCCCCC
Confidence            36677888888888888888888888888885     67778888774

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.2e-10  Score=65.05  Aligned_cols=44  Identities=48%  Similarity=0.835  Sum_probs=35.8

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-----~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQK-----THTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHH-----HHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHH-----HhCCCCCCCCCC
Confidence            36677888888888888888888888888885     688888888864

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.5e-10  Score=63.20  Aligned_cols=41  Identities=46%  Similarity=0.805  Sum_probs=36.0

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCccc
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC   85 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C   85 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR-----VHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGG-----GTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHH-----HhCCCCCCCC
Confidence            6678888999999999999999999999986     7888888877

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.4e-10  Score=64.68  Aligned_cols=44  Identities=43%  Similarity=0.809  Sum_probs=35.1

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQR-----IHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHH-----HHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHH-----hcCCCCCCCCCC
Confidence            36677888888888888888888888888885     677888888864

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.8e-10  Score=64.37  Aligned_cols=43  Identities=37%  Similarity=0.681  Sum_probs=34.3

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKR-----VHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHH-----HCSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHH-----HhCCCCCCCCCC
Confidence            5667788888888888888888888888885     677888888863

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.5e-10  Score=64.72  Aligned_cols=44  Identities=41%  Similarity=0.710  Sum_probs=36.0

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      +|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR-----VHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHH-----HHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHH-----HhCCCCCCCCCC
Confidence            46777888888888888888888888888885     788888888863

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.1e-10  Score=63.32  Aligned_cols=43  Identities=37%  Similarity=0.630  Sum_probs=36.0

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR-----THTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHT-----TTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhh-----hcCCCCCCCCC
Confidence            36777888888999999999999999999985     78888888884

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=2.9e-10  Score=62.82  Aligned_cols=43  Identities=28%  Similarity=0.478  Sum_probs=37.8

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQK-----THAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGG-----GGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHH-----HcCCCCCcCCC
Confidence            46778889999999999999999999999996     78889999884

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=2.8e-10  Score=63.55  Aligned_cols=44  Identities=23%  Similarity=0.397  Sum_probs=38.6

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCC-CCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTG-EKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~-~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.+ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHER-----IHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHT-----TCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            36778899999999999999999999999996     7888 89999863

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.5e-10  Score=64.71  Aligned_cols=43  Identities=42%  Similarity=0.726  Sum_probs=34.7

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      +|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ-----SHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHH-----HHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHH-----HcCCCCCCCCC
Confidence            46677888888888888888888888888885     67888888885

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.2e-10  Score=63.91  Aligned_cols=44  Identities=41%  Similarity=0.761  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQA-----IHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHT-----TSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHH-----HhCCCCCCCCCC
Confidence            46778899999999999999999999999996     788899999863

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2e-10  Score=64.10  Aligned_cols=43  Identities=33%  Similarity=0.643  Sum_probs=33.4

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQR-----IHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHH-----HHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHH-----HcCCCCCCCCCC
Confidence            5667777888888888888888888888875     677778887764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.89  E-value=9.5e-10  Score=59.01  Aligned_cols=37  Identities=22%  Similarity=0.473  Sum_probs=30.5

Q ss_pred             hCCCCceecccccccccChhhHHHHHHHhcCCCCeeC
Q psy2103          16 HSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRC   52 (203)
Q Consensus        16 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C   52 (203)
                      |.++++|.|.+|++.|.+...|..|+++|.++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4577888888888888888888888888888888765

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=7.3e-10  Score=61.46  Aligned_cols=42  Identities=29%  Similarity=0.637  Sum_probs=38.3

Q ss_pred             HhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCC
Q psy2103          43 IHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICD   89 (203)
Q Consensus        43 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~   89 (203)
                      .|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~-----~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVR-----SHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHH-----HHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHH-----HccCCCCCCCcCCC
Confidence            4778899999999999999999999996     78999999999986

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=2.9e-10  Score=62.14  Aligned_cols=41  Identities=41%  Similarity=0.839  Sum_probs=32.6

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCccc
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC   85 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C   85 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR-----IHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTT-----TTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHH-----hcCCCCCCCC
Confidence            5567778888888888888888888888885     6777888776

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=3.9e-10  Score=62.91  Aligned_cols=43  Identities=42%  Similarity=0.799  Sum_probs=37.3

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQR-----VHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGG-----GSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHH-----HhCCCCCCCCCC
Confidence            5667888999999999999999999999986     788889998863

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.9e-10  Score=64.24  Aligned_cols=43  Identities=40%  Similarity=0.634  Sum_probs=34.9

Q ss_pred             HHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          41 RRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        41 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      +++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWI-----THTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHT-----HHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHH-----HcCCCCCCCCCCC
Confidence            356778888888888888888888888885     6778888888876

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=3.2e-11  Score=77.40  Aligned_cols=53  Identities=23%  Similarity=0.342  Sum_probs=45.3

Q ss_pred             HHhCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhh
Q psy2103          14 RIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        14 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      .+|.++++|.|.+|++.|.....|..|+++|.++++|.|..|.    ....|..|.+
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~   70 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQK   70 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhc
Confidence            4588999999999999999999999999999999999998764    4556666664

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=7.1e-10  Score=58.70  Aligned_cols=36  Identities=31%  Similarity=0.562  Sum_probs=31.9

Q ss_pred             HHhCCCCceecccccccccChhhHHHHHHHhcCCCC
Q psy2103          14 RIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKP   49 (203)
Q Consensus        14 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~   49 (203)
                      ++|.++++|.|.+|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            468889999999999999999999999999988764

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.86  E-value=3.8e-10  Score=61.58  Aligned_cols=41  Identities=29%  Similarity=0.562  Sum_probs=27.9

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCccc
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC   85 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C   85 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~-----~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR-----SCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHH-----HTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhh-----hcCCCCCCCC
Confidence            3455666677777777777777777777764     5666666665

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=2.4e-10  Score=63.13  Aligned_cols=43  Identities=33%  Similarity=0.587  Sum_probs=36.5

Q ss_pred             HHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          39 NHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        39 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      .|+++|.++++|.|..|++.|.....|..|++     .|.++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-----~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQK-----IHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHH-----HHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHH-----HhCCCCCCCCC
Confidence            36778888889999999999999999999986     78888888874

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.7e-10  Score=62.24  Aligned_cols=41  Identities=41%  Similarity=0.844  Sum_probs=24.9

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCccc
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC   85 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C   85 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL-----IHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTH-----HHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHH-----HcCCCCCCCC
Confidence            3445566666666666666666666666664     5556666655

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.8e-10  Score=64.26  Aligned_cols=42  Identities=31%  Similarity=0.581  Sum_probs=28.4

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLR-----SHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHH-----HHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHH-----HhCCCCCCCCC
Confidence            5566666777777777777777777777764     56666666664

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.2e-10  Score=63.96  Aligned_cols=42  Identities=31%  Similarity=0.732  Sum_probs=24.0

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLR-----LHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHH-----HHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHH-----HhCCCCCCCCC
Confidence            4455555555666666666666666666654     45555555554

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.82  E-value=7.5e-10  Score=58.61  Aligned_cols=36  Identities=33%  Similarity=0.648  Sum_probs=28.5

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcCC
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      |+++|.+++||.|++|++.|.....|..|+++|.++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            566777888888888888888888888888877653

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=8.3e-10  Score=60.97  Aligned_cols=41  Identities=34%  Similarity=0.603  Sum_probs=32.3

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCccc
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC   85 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C   85 (203)
                      |+++|.++++|.|.+|++.|.....|..|++     .|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHER-----THAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHG-----GGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHh-----HhcCCCCCCC
Confidence            5667778888888888888888888888875     6777777766

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.81  E-value=3.6e-09  Score=55.06  Aligned_cols=35  Identities=31%  Similarity=0.490  Sum_probs=30.3

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCCCC
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKP   49 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~   49 (203)
                      +|.++++|.|.+|++.|.....|..|++.|+++++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            36788899999999999999999999999988754

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.2e-09  Score=61.37  Aligned_cols=44  Identities=34%  Similarity=0.633  Sum_probs=39.5

Q ss_pred             HHHHhcCCCCeeCc--chhhhccChhHHHhhhhcCCccccCCCCCcccCCC
Q psy2103          40 HRRIHTGEKPYRCS--ICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDIC   88 (203)
Q Consensus        40 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C   88 (203)
                      |.++|.++++|.|.  .|++.|.....|..|++     .|.++++|.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRR-----SHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHT-----TSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHH-----HhCCCCCCCCCCC
Confidence            34578899999998  89999999999999996     7999999999987

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=6.1e-10  Score=61.49  Aligned_cols=42  Identities=21%  Similarity=0.447  Sum_probs=27.6

Q ss_pred             HHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        40 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      |+++|.++++|.|..|++.|.....|..|++     .|.++++|.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQA-----LHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHH-----HHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHH-----HHCCCCCCCCC
Confidence            4455666666777777777777777777764     56666666663

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.78  E-value=3.6e-09  Score=55.11  Aligned_cols=35  Identities=29%  Similarity=0.637  Sum_probs=29.2

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCCCC
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKP   49 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~   49 (203)
                      +|.++++|.|.+|++.|.....|..|+++|+++++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            36788889999999999999999999888887653

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.4e-09  Score=60.35  Aligned_cols=42  Identities=36%  Similarity=0.714  Sum_probs=36.7

Q ss_pred             HHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          41 RRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        41 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .++|.++++|.|..|++.|.....|..|++     .|.++++|.|+.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQR-----IHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHT-----TTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHH-----HhCCCCCCCCCC
Confidence            356788899999999999999999999996     788999999863

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=1.6e-10  Score=71.88  Aligned_cols=66  Identities=20%  Similarity=0.264  Sum_probs=58.6

Q ss_pred             hhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhh
Q psy2103          35 STLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        35 ~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~  108 (203)
                      ..|..|++++.+++++.|..|+..| ....|..|+      .+.+++++.|+.|++.|. ...|..|++.+.+.
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~------~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE------DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH------HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             hHHHhhCcccCCCcccCCcccChHh-hHHHHHHHH------hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            4577888889999999999999999 499999998      478899999999999988 58999999988665

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=2e-09  Score=59.95  Aligned_cols=41  Identities=41%  Similarity=0.681  Sum_probs=30.1

Q ss_pred             HHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          41 RRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        41 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      ++.|.++++|.|..|++.|.....|..|++     .|.++++|.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-----~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRR-----IHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHH-----HHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHH-----HhCCCCCCCCC
Confidence            345677777777777777777777777775     67777777775

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=5.1e-09  Score=56.69  Aligned_cols=38  Identities=34%  Similarity=0.729  Sum_probs=33.2

Q ss_pred             HhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCccc
Q psy2103          43 IHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC   85 (203)
Q Consensus        43 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C   85 (203)
                      +|.++++|.|..|++.|.....|..|++     .|.++++|.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHER-----IHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGG-----GCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHH-----HhCCCCCcCC
Confidence            5778889999999999999999999985     7888888877

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.71  E-value=8.3e-09  Score=53.14  Aligned_cols=32  Identities=28%  Similarity=0.453  Sum_probs=28.4

Q ss_pred             CceecccccccccChhhHHHHHHHhcCCCCee
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGEKPYR   51 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~   51 (203)
                      +||.|.+|++.|.....|..|+++|.++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47899999999999999999999999988875

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.71  E-value=3.5e-09  Score=58.09  Aligned_cols=40  Identities=20%  Similarity=0.388  Sum_probs=30.8

Q ss_pred             HhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          43 IHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        43 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      +|.++++|.|..|++.|.....|..|++     .|.++++|.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTL-----QTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHH-----HHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHH-----hhCCCCCccCCC
Confidence            4667778888888888888888888875     677778887753

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=1.1e-08  Score=61.41  Aligned_cols=39  Identities=28%  Similarity=0.458  Sum_probs=30.5

Q ss_pred             hCCCCceeccc--ccccccChhhHHHHH-HHhcCCCCeeCcc
Q psy2103          16 HSGERPYQCEV--CEKTFARHSTLWNHR-RIHTGEKPYRCSI   54 (203)
Q Consensus        16 h~~~~~~~C~~--C~~~f~~~~~L~~H~-~~h~~~~~~~C~~   54 (203)
                      ..+++||.|.+  |++.|.....|..|+ ++|++++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            35778888865  888888888888887 5788888887764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.5e-08  Score=54.12  Aligned_cols=32  Identities=22%  Similarity=0.368  Sum_probs=28.7

Q ss_pred             hCCCCceeccc--ccccccChhhHHHHHHHhcCC
Q psy2103          16 HSGERPYQCEV--CEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        16 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +.+++||.|.+  |++.|.....|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56889999986  999999999999999999875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.4e-08  Score=53.13  Aligned_cols=34  Identities=41%  Similarity=0.626  Sum_probs=29.9

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCCC
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEK   48 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   48 (203)
                      +|.++++|.|.+|++.|.....|..|+++|.+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4778899999999999999999999999998763

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=6.4e-09  Score=55.02  Aligned_cols=34  Identities=21%  Similarity=0.301  Sum_probs=28.9

Q ss_pred             HHhCCCCceecccccccccChhhHHHH-HHHhcCC
Q psy2103          14 RIHSGERPYQCEVCEKTFARHSTLWNH-RRIHTGE   47 (203)
Q Consensus        14 ~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~   47 (203)
                      ++|.+++||.|.+|++.|.....|..| ++.|.++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            467888999999999999999999999 8888764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.8e-08  Score=52.78  Aligned_cols=33  Identities=30%  Similarity=0.559  Sum_probs=28.6

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCC
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      .|.+++||.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            477888999999999999999999999988775

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=1.2e-09  Score=70.00  Aligned_cols=48  Identities=19%  Similarity=0.234  Sum_probs=31.3

Q ss_pred             ChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHhhhh
Q psy2103          61 QATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        61 ~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~  108 (203)
                      ...+|.+|+...+.+.|.++++|.|+.|++.|.....|..|++.|.+.
T Consensus         4 ~~~~lkr~~~~~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~e   51 (88)
T 1x6f_A            4 GSSGLKRDFIILGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEE   51 (88)
T ss_dssp             CCCCCCCCCCCCCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             cchhhccceeeccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCC
Confidence            334445555444445677777777777777777777777777777553

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=2e-08  Score=52.89  Aligned_cols=34  Identities=32%  Similarity=0.518  Sum_probs=29.7

Q ss_pred             HhCCCCceecccccccccCh-hhHHHHHHHhcCCC
Q psy2103          15 IHSGERPYQCEVCEKTFARH-STLWNHRRIHTGEK   48 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~-~~L~~H~~~h~~~~   48 (203)
                      +|.++++|.|.+|++.|... ..|..|+++|.+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            57788999999999999998 99999999988753

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=2.3e-08  Score=52.24  Aligned_cols=34  Identities=29%  Similarity=0.575  Sum_probs=29.7

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCCC
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEK   48 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   48 (203)
                      .|.++++|.|.+|++.|.+...|..|+++|.+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4678889999999999999999999999998763

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.7e-08  Score=52.85  Aligned_cols=33  Identities=24%  Similarity=0.458  Sum_probs=26.7

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCC
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      .|.+++||.|.+|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            466778888888888888888888888888765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=2.3e-08  Score=52.96  Aligned_cols=35  Identities=23%  Similarity=0.536  Sum_probs=30.7

Q ss_pred             hCCCCceecc--cccccccChhhHHHHHHHhcCCCCe
Q psy2103          16 HSGERPYQCE--VCEKTFARHSTLWNHRRIHTGEKPY   50 (203)
Q Consensus        16 h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~   50 (203)
                      |.++++|.|.  .|++.|.....|..|+++|.++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5678899999  5999999999999999999988775

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=3.5e-08  Score=51.60  Aligned_cols=34  Identities=41%  Similarity=0.666  Sum_probs=29.4

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCCC
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEK   48 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   48 (203)
                      .|.++++|.|.+|++.|.....|..|+++|.+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            3667889999999999999999999999988763

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.53  E-value=4.2e-08  Score=55.11  Aligned_cols=34  Identities=26%  Similarity=0.618  Sum_probs=27.4

Q ss_pred             HhCCCCceecccccccccChhhHHHHHH-HhcCCC
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRR-IHTGEK   48 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~   48 (203)
                      +|.++++|.|.+|++.|.....|..|++ +|.++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            4778889999999999999999999988 887764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.51  E-value=7.5e-08  Score=50.56  Aligned_cols=32  Identities=41%  Similarity=0.567  Sum_probs=23.4

Q ss_pred             cccCCCCCcccCCCCccCCChHHHHHHHHHhh
Q psy2103          75 KVHTGEKPHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        75 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      +.|.++++|.|+.|++.|.....|..|++.|.
T Consensus         4 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CcCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            46777777777777777777777777776664

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.51  E-value=7.3e-08  Score=51.36  Aligned_cols=37  Identities=27%  Similarity=0.524  Sum_probs=29.5

Q ss_pred             hcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCccc
Q psy2103          44 HTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHC   85 (203)
Q Consensus        44 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C   85 (203)
                      |.++++|.|..|++.|.....|..|+.     .|.++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~-----~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMN-----VHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHH-----TTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHH-----HcCCCcccee
Confidence            456788888888888888888888885     7788887765

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.48  E-value=1e-07  Score=50.18  Aligned_cols=34  Identities=32%  Similarity=0.618  Sum_probs=29.3

Q ss_pred             HhCCCCceeccc--ccccccChhhHHHHHHHhcCCC
Q psy2103          15 IHSGERPYQCEV--CEKTFARHSTLWNHRRIHTGEK   48 (203)
Q Consensus        15 ~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~   48 (203)
                      .|.++++|.|.+  |++.|.....|..|+++|.+++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            367889999985  9999999999999999998763

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.46  E-value=4.8e-08  Score=51.38  Aligned_cols=26  Identities=27%  Similarity=0.405  Sum_probs=21.8

Q ss_pred             hCCCCceecccccccccChhhHHHHH
Q psy2103          16 HSGERPYQCEVCEKTFARHSTLWNHR   41 (203)
Q Consensus        16 h~~~~~~~C~~C~~~f~~~~~L~~H~   41 (203)
                      +.+++||.|.+|++.|...+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45788888888888888888888887

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.45  E-value=1.4e-07  Score=46.78  Aligned_cols=29  Identities=28%  Similarity=0.746  Sum_probs=24.0

Q ss_pred             CCceecccccccccChhhHHHHHHHhcCC
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      ++||.|.+|++.|.....|..|++.|.++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            46788888888888888888888888765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.43  E-value=1.9e-08  Score=56.24  Aligned_cols=39  Identities=21%  Similarity=0.450  Sum_probs=31.9

Q ss_pred             HHHHHHhCCCCceecc--cccccccChhhHHHHHHHhcCCC
Q psy2103          10 KNHERIHSGERPYQCE--VCEKTFARHSTLWNHRRIHTGEK   48 (203)
Q Consensus        10 ~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~   48 (203)
                      ..|+..|.+++||.|.  .|++.|.....|..|+++|++++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3445568889999996  69999999999999999998763

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1.8e-07  Score=49.08  Aligned_cols=33  Identities=18%  Similarity=0.425  Sum_probs=26.1

Q ss_pred             cccCCCCCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          75 KVHTGEKPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        75 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      +.|.++++|.|+.|++.|.....|..|++.|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            467778888888888888888888888887754

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.40  E-value=2.2e-07  Score=45.67  Aligned_cols=28  Identities=50%  Similarity=0.922  Sum_probs=24.2

Q ss_pred             CceecccccccccChhhHHHHHHHhcCC
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +||.|.+|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4788999999999999999999988775

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.39  E-value=1.6e-07  Score=46.23  Aligned_cols=28  Identities=29%  Similarity=0.546  Sum_probs=22.5

Q ss_pred             CceecccccccccChhhHHHHHHHhcCC
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +||.|.+|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4688888888888888888888887765

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.37  E-value=2.3e-07  Score=55.76  Aligned_cols=40  Identities=18%  Similarity=0.287  Sum_probs=32.8

Q ss_pred             hCCCCceecccccccccChhhHHHHHHHhcCCCCeeCcchh
Q psy2103          16 HSGERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICG   56 (203)
Q Consensus        16 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~   56 (203)
                      +.+++||.|.+|++.|.....|..|+++|+++. ..+.+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            567899999999999999999999999998863 4455544

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.37  E-value=1.1e-08  Score=52.29  Aligned_cols=30  Identities=23%  Similarity=0.430  Sum_probs=18.1

Q ss_pred             ceecccccccccChhhHHHHHHHhcCCCCe
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHTGEKPY   50 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~   50 (203)
                      ||.|.+|++.|.....|..|+++|+++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            556666666666666666666666655543

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.37  E-value=2.5e-07  Score=44.82  Aligned_cols=27  Identities=30%  Similarity=0.703  Sum_probs=21.8

Q ss_pred             CCceecccccccccChhhHHHHHHHhc
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIHT   45 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h~   45 (203)
                      ++||.|.+|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            467888888888888888888888763

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.36  E-value=2.6e-07  Score=45.36  Aligned_cols=29  Identities=45%  Similarity=0.854  Sum_probs=24.9

Q ss_pred             CceecccccccccChhhHHHHHHHhcCCC
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGEK   48 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   48 (203)
                      ++|.|.+|++.|.+...|..|+++|.+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47899999999999999999999888763

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.35  E-value=1.9e-07  Score=45.64  Aligned_cols=27  Identities=44%  Similarity=0.899  Sum_probs=20.4

Q ss_pred             CCceecccccccccChhhHHHHHHHhc
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIHT   45 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h~   45 (203)
                      +++|.|.+|++.|.+...|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            357788888888888888888877665

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.34  E-value=2e-07  Score=55.97  Aligned_cols=38  Identities=32%  Similarity=0.575  Sum_probs=19.8

Q ss_pred             cCCCCeeCcc--hhhhccChhHHHhhhhcCCccccCCCCCcccC
Q psy2103          45 TGEKPYRCSI--CGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD   86 (203)
Q Consensus        45 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~   86 (203)
                      .+++||.|..  |++.|.....|..|++    +.|++++||.|.
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~r----riHTgEKP~~~~   62 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQ----AVHKSDLPAFSA   62 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHH----HHSSSCCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhh----hhCCCCCCcccc
Confidence            4455555543  5555555555555542    245555555553

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.33  E-value=3.4e-07  Score=45.25  Aligned_cols=29  Identities=31%  Similarity=0.559  Sum_probs=24.8

Q ss_pred             CceecccccccccChhhHHHHHHHhcCCC
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGEK   48 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   48 (203)
                      ++|.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            46889999999999999999999888764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.32  E-value=1.9e-07  Score=45.35  Aligned_cols=26  Identities=27%  Similarity=0.639  Sum_probs=19.1

Q ss_pred             CCceecccccccccChhhHHHHHHHh
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIH   44 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h   44 (203)
                      ++||.|.+|++.|.....|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            35677777777777777777777665

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.31  E-value=3.1e-07  Score=44.99  Aligned_cols=28  Identities=29%  Similarity=0.648  Sum_probs=24.5

Q ss_pred             CceecccccccccChhhHHHHHHHhcCC
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +||.|.+|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4789999999999999999999988775

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=4.5e-07  Score=48.22  Aligned_cols=32  Identities=25%  Similarity=0.467  Sum_probs=25.4

Q ss_pred             ccCCCCCcccCC--CCccCCChHHHHHHHHHhhh
Q psy2103          76 VHTGEKPHHCDI--CDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        76 ~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~~~  107 (203)
                      .+.++++|.|+.  |++.|.....|..|+++|.+
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            466778888876  88888888888888888754

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.31  E-value=4.6e-07  Score=46.66  Aligned_cols=31  Identities=19%  Similarity=0.330  Sum_probs=19.4

Q ss_pred             cCCCCCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          77 HTGEKPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        77 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      |.++++|.|+.|++.|.....|..|++.|.+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            4455666666666666666666666666543

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.29  E-value=3.5e-07  Score=47.21  Aligned_cols=27  Identities=37%  Similarity=0.800  Sum_probs=13.9

Q ss_pred             hcCCCCeeCcchhhhccChhHHHhhhh
Q psy2103          44 HTGEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        44 h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      |.++++|.|..|++.|.....|..|++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~   28 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLK   28 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHG
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHH
Confidence            344455555555555555555555553

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=3.1e-07  Score=48.26  Aligned_cols=32  Identities=25%  Similarity=0.293  Sum_probs=22.0

Q ss_pred             cccCCCCCcccCCCCccCCChHHHHHH-HHHhh
Q psy2103          75 KVHTGEKPHHCDICDVGFSDKFALKRH-RLIHE  106 (203)
Q Consensus        75 ~~~~~~~~~~C~~C~~~f~~~~~L~~H-~~~~~  106 (203)
                      +.|.++++|.|+.|++.|.....|..| ++.|.
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            356667777777777777777777777 66553

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.29  E-value=4.4e-07  Score=45.81  Aligned_cols=29  Identities=38%  Similarity=0.956  Sum_probs=23.5

Q ss_pred             CCceecc--cccccccChhhHHHHHHHhcCC
Q psy2103          19 ERPYQCE--VCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        19 ~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      ++||.|.  .|++.|.....|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4678888  7888888888888888888765

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.60  E-value=1e-07  Score=47.04  Aligned_cols=28  Identities=50%  Similarity=0.923  Sum_probs=21.7

Q ss_pred             CceecccccccccChhhHHHHHHHhcCC
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +||.|.+|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3678888888888888888888777664

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=7.5e-07  Score=46.58  Aligned_cols=33  Identities=27%  Similarity=0.487  Sum_probs=26.2

Q ss_pred             cccCCCCCcccCCCCccCCCh-HHHHHHHHHhhh
Q psy2103          75 KVHTGEKPHHCDICDVGFSDK-FALKRHRLIHEK  107 (203)
Q Consensus        75 ~~~~~~~~~~C~~C~~~f~~~-~~L~~H~~~~~~  107 (203)
                      +.|.++++|.|+.|++.|... ..|..|++.|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            357778888888888888888 888888887754

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.59  E-value=1.1e-07  Score=47.27  Aligned_cols=28  Identities=50%  Similarity=0.967  Sum_probs=22.2

Q ss_pred             CceecccccccccChhhHHHHHHHhcCC
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +||.|.+|++.|.+...|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5788888888888888888888877664

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.25  E-value=4.5e-07  Score=45.45  Aligned_cols=28  Identities=50%  Similarity=1.023  Sum_probs=22.0

Q ss_pred             Cceecc--cccccccChhhHHHHHHHhcCC
Q psy2103          20 RPYQCE--VCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        20 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +||.|.  .|++.|.....|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            467887  7888888888888888887765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=9.6e-07  Score=45.76  Aligned_cols=32  Identities=25%  Similarity=0.318  Sum_probs=24.9

Q ss_pred             ccCCCCCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          76 VHTGEKPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        76 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      .|.++++|.|+.|++.|.....|..|++.|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            46777788888888888888888888877753

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=9.1e-07  Score=45.93  Aligned_cols=31  Identities=29%  Similarity=0.520  Sum_probs=22.6

Q ss_pred             ccCCCCCcccCCCCccCCChHHHHHHHHHhh
Q psy2103          76 VHTGEKPHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        76 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      .|.++++|.|+.|++.|.....|..|++.|.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            4666777777777777777777777777664

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.22  E-value=4.1e-07  Score=43.91  Aligned_cols=26  Identities=38%  Similarity=0.972  Sum_probs=18.8

Q ss_pred             ceecccccccccChhhHHHHHHHhcC
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHTG   46 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~~   46 (203)
                      ||.|.+|++.|.+...|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46777777777777777777777664

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=1.5e-06  Score=45.02  Aligned_cols=32  Identities=38%  Similarity=0.706  Sum_probs=26.5

Q ss_pred             ccCCCCCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          76 VHTGEKPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        76 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      .|.++++|.|+.|++.|.+...|..|++.|.+
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            56778888888888888888888888888754

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=7.6e-07  Score=46.25  Aligned_cols=30  Identities=27%  Similarity=0.579  Sum_probs=17.3

Q ss_pred             ccCCCCCcccCCCCccCCChHHHHHHHHHh
Q psy2103          76 VHTGEKPHHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        76 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      .|.++++|.|..|++.|.....|..|++.|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVH   32 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHh
Confidence            345555566666666666666666665554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.17  E-value=8.7e-06  Score=48.75  Aligned_cols=34  Identities=21%  Similarity=0.309  Sum_probs=30.1

Q ss_pred             ccCCCCCcccCCCCccCCChHHHHHHHHHhhhhh
Q psy2103          76 VHTGEKPHHCDICDVGFSDKFALKRHRLIHEKYA  109 (203)
Q Consensus        76 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~  109 (203)
                      .+.++++|.|..|++.|.....|..|+++|.+..
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            4677899999999999999999999999997743

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.45  E-value=2.5e-07  Score=44.36  Aligned_cols=25  Identities=52%  Similarity=0.937  Sum_probs=18.1

Q ss_pred             CceecccccccccChhhHHHHHHHh
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIH   44 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h   44 (203)
                      +||.|.+|++.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3677777777777777777777665

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.16  E-value=7.2e-07  Score=45.55  Aligned_cols=21  Identities=29%  Similarity=0.730  Sum_probs=10.5

Q ss_pred             CeeCcchhhhccChhHHHhhh
Q psy2103          49 PYRCSICGSAFNQATHLKNHA   69 (203)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~   69 (203)
                      +|.|..|++.|.....|..|+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~   22 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHI   22 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHH
T ss_pred             cccCCCCCchhCCHHHHHHHH
Confidence            344555555555555555554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.12  E-value=4.3e-07  Score=43.82  Aligned_cols=27  Identities=15%  Similarity=0.243  Sum_probs=23.7

Q ss_pred             ccccchhhHhHHHHHHHHHHHhhccCC
Q psy2103         138 EWKCESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       138 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      +|.|..||+.|.....|.+|++.|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            478999999999999999999998763

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.11  E-value=8.9e-07  Score=43.77  Aligned_cols=27  Identities=37%  Similarity=0.986  Sum_probs=17.8

Q ss_pred             ceecccccccccChhhHHHH-HHHhcCC
Q psy2103          21 PYQCEVCEKTFARHSTLWNH-RRIHTGE   47 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H-~~~h~~~   47 (203)
                      ||.|..|++.|.+...|..| +++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56677777777777777777 4566554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=2.1e-06  Score=44.52  Aligned_cols=32  Identities=28%  Similarity=0.471  Sum_probs=23.4

Q ss_pred             ccCCCCCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          76 VHTGEKPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        76 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      .+.++++|.|+.|++.|.....|..|++.|.+
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            35566777887788888877778777777643

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.09  E-value=8.2e-07  Score=43.48  Aligned_cols=27  Identities=19%  Similarity=0.327  Sum_probs=25.1

Q ss_pred             ccccchhhHhHHHHHHHHHHHhhccCC
Q psy2103         138 EWKCESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       138 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      +|.|+.||+.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            589999999999999999999999865

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.08  E-value=1.2e-06  Score=49.01  Aligned_cols=31  Identities=29%  Similarity=0.561  Sum_probs=22.6

Q ss_pred             cCCCCCcccCCCCccCCChHHHHHHHH-Hhhh
Q psy2103          77 HTGEKPHHCDICDVGFSDKFALKRHRL-IHEK  107 (203)
Q Consensus        77 ~~~~~~~~C~~C~~~f~~~~~L~~H~~-~~~~  107 (203)
                      |.++++|.|..|++.|.....|..|++ .|.+
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            566777777777777777777777777 5544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.33  E-value=5.2e-07  Score=44.37  Aligned_cols=27  Identities=15%  Similarity=0.214  Sum_probs=24.9

Q ss_pred             ccccchhhHhHHHHHHHHHHHhhccCC
Q psy2103         138 EWKCESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       138 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      +|.|..||+.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            589999999999999999999999764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.06  E-value=1.4e-06  Score=45.85  Aligned_cols=29  Identities=31%  Similarity=0.561  Sum_probs=15.4

Q ss_pred             CCCCcccC--CCCccCCChHHHHHHHHHhhh
Q psy2103          79 GEKPHHCD--ICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        79 ~~~~~~C~--~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      ++++|.|.  .|++.|.....|..|++.|.+
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   33 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCC
Confidence            44555555  355555555555555555543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.02  E-value=1.1e-06  Score=43.21  Aligned_cols=28  Identities=11%  Similarity=0.202  Sum_probs=25.8

Q ss_pred             cccccchhhHhHHHHHHHHHHHhhccCC
Q psy2103         137 EEWKCESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       137 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      .+|.|..||+.|.....|..|++.|.++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            5689999999999999999999999865

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.01  E-value=9.5e-07  Score=42.75  Aligned_cols=26  Identities=19%  Similarity=0.332  Sum_probs=23.8

Q ss_pred             cccccchhhHhHHHHHHHHHHHhhcc
Q psy2103         137 EEWKCESSRLIFEAWAKLQKELLSQS  162 (203)
Q Consensus       137 ~~~~C~~C~~~f~~~~~l~~H~~~h~  162 (203)
                      .+|.|+.||+.|...+.|.+|++.|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            46999999999999999999999874

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.01  E-value=3.5e-06  Score=40.54  Aligned_cols=25  Identities=32%  Similarity=0.590  Sum_probs=18.0

Q ss_pred             CCcccCCCCccCCChHHHHHHHHHh
Q psy2103          81 KPHHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        81 ~~~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      ++|.|+.|++.|.....|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4677777777777777777777655

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.01  E-value=8.7e-07  Score=43.11  Aligned_cols=27  Identities=11%  Similarity=0.294  Sum_probs=24.7

Q ss_pred             cccccchhhHhHHHHHHHHHHHhhccC
Q psy2103         137 EEWKCESSRLIFEAWAKLQKELLSQSG  163 (203)
Q Consensus       137 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  163 (203)
                      .+|.|..||+.|.....|..|++.|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            468999999999999999999998864

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.00  E-value=3.7e-06  Score=43.96  Aligned_cols=26  Identities=23%  Similarity=0.406  Sum_probs=19.7

Q ss_pred             cCCCCCcccCCCCccCCChHHHHHHH
Q psy2103          77 HTGEKPHHCDICDVGFSDKFALKRHR  102 (203)
Q Consensus        77 ~~~~~~~~C~~C~~~f~~~~~L~~H~  102 (203)
                      +.++++|.|+.|++.|.+.+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45677777777777777777777776

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.26  E-value=7.7e-07  Score=42.57  Aligned_cols=25  Identities=16%  Similarity=0.304  Sum_probs=23.1

Q ss_pred             ccccchhhHhHHHHHHHHHHHhhcc
Q psy2103         138 EWKCESSRLIFEAWAKLQKELLSQS  162 (203)
Q Consensus       138 ~~~C~~C~~~f~~~~~l~~H~~~h~  162 (203)
                      +|.|+.||+.|.....|..|++.|+
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            6899999999999999999999873

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.24  E-value=8.4e-07  Score=43.83  Aligned_cols=28  Identities=18%  Similarity=0.301  Sum_probs=25.5

Q ss_pred             cccccchhhHhHHHHHHHHHHHhhccCC
Q psy2103         137 EEWKCESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       137 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      .+|.|..||+.|.....|..|++.|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4689999999999999999999998764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.99  E-value=7.4e-07  Score=43.69  Aligned_cols=27  Identities=15%  Similarity=0.229  Sum_probs=25.1

Q ss_pred             ccccchhhHhHHHHHHHHHHHhhccCC
Q psy2103         138 EWKCESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       138 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      +|.|+.||+.|.....|..|++.|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            589999999999999999999999865

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.98  E-value=3.5e-06  Score=41.10  Aligned_cols=27  Identities=37%  Similarity=0.808  Sum_probs=20.7

Q ss_pred             Cceecc--cccccccChhhHHHHHHHhcC
Q psy2103          20 RPYQCE--VCEKTFARHSTLWNHRRIHTG   46 (203)
Q Consensus        20 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~   46 (203)
                      ++|.|.  .|++.|.....|..|+++|.+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            367888  888888888888888877753

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.97  E-value=6.6e-06  Score=42.93  Aligned_cols=32  Identities=25%  Similarity=0.392  Sum_probs=25.4

Q ss_pred             ccCCCCCcccCC--CCccCCChHHHHHHHHHhhh
Q psy2103          76 VHTGEKPHHCDI--CDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        76 ~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~~~  107 (203)
                      .|.++++|.|.+  |++.|.....|..|++.|.+
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            366778888874  88888888888888888754

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.94  E-value=8.8e-07  Score=44.84  Aligned_cols=31  Identities=19%  Similarity=0.328  Sum_probs=26.2

Q ss_pred             CCeeCcchhhhccChhHHHhhhhcCCccccCCCCCc
Q psy2103          48 KPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPH   83 (203)
Q Consensus        48 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~   83 (203)
                      ++|.|..|++.|...+.|..|++     .|.++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~-----~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIK-----TAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTT-----SSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHH-----HHccCCCC
Confidence            47889999999999999999985     78877765

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.92  E-value=2.2e-06  Score=42.77  Aligned_cols=27  Identities=19%  Similarity=0.289  Sum_probs=24.9

Q ss_pred             ccccc--hhhHhHHHHHHHHHHHhhccCC
Q psy2103         138 EWKCE--SSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       138 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      +|.|.  .||+.|.....|.+|++.|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            58897  9999999999999999999875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.92  E-value=8.7e-06  Score=39.81  Aligned_cols=26  Identities=23%  Similarity=0.425  Sum_probs=20.1

Q ss_pred             CcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          82 PHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        82 ~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      +|.|+.|++.|.....|..|++.|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHcc
Confidence            57788888888888888888777754

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.89  E-value=1e-05  Score=39.19  Aligned_cols=27  Identities=41%  Similarity=0.594  Sum_probs=21.2

Q ss_pred             CCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          81 KPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        81 ~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      ++|.|+.|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            367888888888888888888877754

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=1e-05  Score=39.23  Aligned_cols=26  Identities=38%  Similarity=0.634  Sum_probs=18.7

Q ss_pred             CcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          82 PHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        82 ~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      +|.|+.|++.|.....|..|++.|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            57777777777777777777777643

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.84  E-value=1.5e-05  Score=47.45  Aligned_cols=44  Identities=20%  Similarity=0.406  Sum_probs=22.9

Q ss_pred             ccccccChhhHHHHH-HHhcCCC------CeeCc--chhhhccChhHHHhhhh
Q psy2103          27 CEKTFARHSTLWNHR-RIHTGEK------PYRCS--ICGSAFNQATHLKNHAK   70 (203)
Q Consensus        27 C~~~f~~~~~L~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~   70 (203)
                      |++.|.+...|..|+ +.|.+.+      +|.|.  .|++.+.....|..|++
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            666666666666665 3454433      34444  24444444444444443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.81  E-value=1.8e-05  Score=47.06  Aligned_cols=53  Identities=23%  Similarity=0.424  Sum_probs=43.2

Q ss_pred             eeCcc--hhhhccChhHHHhhhhcCCccccCCCC------CcccCC--CCccCCChHHHHHHHHHhh
Q psy2103          50 YRCSI--CGSAFNQATHLKNHAKVGKCKVHTGEK------PHHCDI--CDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        50 ~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~------~~~C~~--C~~~f~~~~~L~~H~~~~~  106 (203)
                      +.|..  |++.|.+...|..|+.    +.|.+.+      .|.|.+  |++.+.....|..|++..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~----~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLL----KDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHH----HHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHH----hhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            34555  9999999999999996    2454443      799985  9999999999999998764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.81  E-value=3.4e-06  Score=46.77  Aligned_cols=32  Identities=19%  Similarity=0.417  Sum_probs=23.6

Q ss_pred             ccCCCCCcccC--CCCccCCChHHHHHHHHHhhh
Q psy2103          76 VHTGEKPHHCD--ICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        76 ~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      .|.++++|.|+  .|++.|.....|..|++.|.+
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            57777778884  588888877778888777654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.80  E-value=3.7e-06  Score=42.20  Aligned_cols=28  Identities=14%  Similarity=0.215  Sum_probs=25.7

Q ss_pred             cccccc--hhhHhHHHHHHHHHHHhhccCC
Q psy2103         137 EEWKCE--SSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       137 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      .+|.|.  .||+.|.....|.+|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            468999  8999999999999999999875

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.76  E-value=3.6e-06  Score=41.44  Aligned_cols=27  Identities=19%  Similarity=0.252  Sum_probs=24.4

Q ss_pred             ccccchhhHhHHHHHHHHHH-HhhccCC
Q psy2103         138 EWKCESSRLIFEAWAKLQKE-LLSQSGY  164 (203)
Q Consensus       138 ~~~C~~C~~~f~~~~~l~~H-~~~h~~~  164 (203)
                      +|.|..||+.|.....|.+| ++.|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            58999999999999999999 6888765

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.72  E-value=6.6e-06  Score=40.02  Aligned_cols=26  Identities=19%  Similarity=0.362  Sum_probs=23.9

Q ss_pred             ccccc--hhhHhHHHHHHHHHHHhhccC
Q psy2103         138 EWKCE--SSRLIFEAWAKLQKELLSQSG  163 (203)
Q Consensus       138 ~~~C~--~C~~~f~~~~~l~~H~~~h~~  163 (203)
                      +|.|.  .||+.|...+.|.+|++.|++
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            58899  999999999999999999864

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.32  E-value=0.00031  Score=47.66  Aligned_cols=80  Identities=10%  Similarity=0.143  Sum_probs=45.0

Q ss_pred             CCcccCCCCccCCChHHHHHHH--HHhhhhhcCccc---cCCCCCCCCCCCCCCCCCCCCCcccccchhhHhHHHHHHHH
Q psy2103          81 KPHHCDICDVGFSDKFALKRHR--LIHEKYARNSTV---NQSHDSQTTPPQSTPTHSSSQLEEWKCESSRLIFEAWAKLQ  155 (203)
Q Consensus        81 ~~~~C~~C~~~f~~~~~L~~H~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~  155 (203)
                      +++.|.+|...|.+...+..|.  +.|.........   ........................|.|.+|+..|.+...|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            4577888888888888888886  344322111000   00000000000000111223346789999999999999999


Q ss_pred             HHHhh
Q psy2103         156 KELLS  160 (203)
Q Consensus       156 ~H~~~  160 (203)
                      .|...
T Consensus       111 ~H~~g  115 (127)
T 1zu1_A          111 SHYIG  115 (127)
T ss_dssp             HHHTS
T ss_pred             HHHCC
Confidence            99865

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.79  E-value=0.0011  Score=44.87  Aligned_cols=77  Identities=21%  Similarity=0.387  Sum_probs=51.0

Q ss_pred             CCceecccccccccChhhHHHHH--HHhcCC-CCeeCcch------hhhccChhHHHhhhhcCCccccCCCCCcccCCCC
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHR--RIHTGE-KPYRCSIC------GSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICD   89 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~--~~h~~~-~~~~C~~C------~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~   89 (203)
                      .+++.|.+|+..|.+...+..|.  +.|... +.+.+..+      +..+...    .+.     ....+...|.|.+|.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~~~C~~C~  100 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PAE-----ISDGEDRSKCCPVCN  100 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SSC-----CSSCCCTTTEETTTT
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----ccc-----cccCCCCCeEcCCCC
Confidence            36789999999999999999998  455321 11211100      1111111    011     145567789999999


Q ss_pred             ccCCChHHHHHHHHH
Q psy2103          90 VGFSDKFALKRHRLI  104 (203)
Q Consensus        90 ~~f~~~~~L~~H~~~  104 (203)
                      +.|.+...|..|+..
T Consensus       101 ~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A          101 MTFSSPVVAESHYIG  115 (127)
T ss_dssp             EECSSHHHHHHHHTS
T ss_pred             CEeCCHHHHHHHHCC
Confidence            999999999999753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.54  E-value=0.00036  Score=46.76  Aligned_cols=28  Identities=32%  Similarity=0.495  Sum_probs=21.0

Q ss_pred             HhcCCCCeeCcchhhhccChhHHHhhhh
Q psy2103          43 IHTGEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        43 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      .|+|+++|.|..|++.|.+...|..|++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            4677777777777777777777777775

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.13  E-value=0.00093  Score=44.77  Aligned_cols=30  Identities=30%  Similarity=0.336  Sum_probs=27.2

Q ss_pred             ccCCCCCcccCCCCccCCChHHHHHHHHHh
Q psy2103          76 VHTGEKPHHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        76 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      .++|.++|.|..|++.|.+...|..|+++.
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            688899999999999999999999997654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.09  E-value=0.003  Score=34.23  Aligned_cols=23  Identities=22%  Similarity=0.362  Sum_probs=20.7

Q ss_pred             CceecccccccccChhhHHHHHH
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRR   42 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~   42 (203)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            46899999999999999999997

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.79  E-value=0.0075  Score=32.68  Aligned_cols=27  Identities=22%  Similarity=0.285  Sum_probs=22.5

Q ss_pred             CCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          81 KPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        81 ~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      ..|.|+.|+..|+....|+.||+..-+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCc
Confidence            668999999999999999999886533

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.43  E-value=0.011  Score=29.89  Aligned_cols=27  Identities=15%  Similarity=0.137  Sum_probs=21.9

Q ss_pred             CcccCCCCccCCChHHHHHHHHHhhhh
Q psy2103          82 PHHCDICDVGFSDKFALKRHRLIHEKY  108 (203)
Q Consensus        82 ~~~C~~C~~~f~~~~~L~~H~~~~~~~  108 (203)
                      .|.||.|.+.|.+...|..|.+..|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            488899999999999998887776643

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.39  E-value=0.075  Score=37.47  Aligned_cols=79  Identities=19%  Similarity=0.283  Sum_probs=55.3

Q ss_pred             Cceecc--cccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHH
Q psy2103          20 RPYQCE--VCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFA   97 (203)
Q Consensus        20 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~   97 (203)
                      ....|+  -|+..+. ...|..|.. .=.-.+..|+.|+..+ ....|..|+.     ..-..+...|+.|+..+.. ..
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~-----~~C~~r~~~C~~C~~~~~~-~~  151 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHIL-----KDCPRRQVSCDNCAASMAF-ED  151 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHH-----HTCTTCEEECTTTCCEEEG-GG
T ss_pred             cccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhh-----hhCCCCCeECCCCCCccCH-HH
Confidence            456774  4777665 456778863 3334567899998877 5667888985     4566777889999887754 46


Q ss_pred             HHHHHHHhhh
Q psy2103          98 LKRHRLIHEK  107 (203)
Q Consensus        98 L~~H~~~~~~  107 (203)
                      |..|...+.+
T Consensus       152 l~~H~~~~~~  161 (170)
T 3hcs_A          152 KEIHDQNCPL  161 (170)
T ss_dssp             HHHHHTTCCC
T ss_pred             HHhHHHhCcC
Confidence            7888766544

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.00  E-value=0.092  Score=26.49  Aligned_cols=25  Identities=20%  Similarity=0.495  Sum_probs=20.5

Q ss_pred             ceecccccccccChhhHHHHHHHhc
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHT   45 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~   45 (203)
                      .|.|++|-+.|.+...|..|-...|
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            3889999999999999999976544

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=92.75  E-value=0.064  Score=32.57  Aligned_cols=49  Identities=18%  Similarity=0.367  Sum_probs=37.9

Q ss_pred             CCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhh
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHA   69 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   69 (203)
                      -.-|.|..|+..++- ..|..|...-.+-..|.|..|+..|.. ..++.|.
T Consensus         8 MV~F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A            8 MVFFTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             CCEEEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             eeEEEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEe
Confidence            345999999988874 558999776666557999999999985 5566665

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=91.38  E-value=0.069  Score=27.12  Aligned_cols=25  Identities=8%  Similarity=0.057  Sum_probs=22.3

Q ss_pred             CcccccchhhHhHHHHHHHHHHHhh
Q psy2103         136 LEEWKCESSRLIFEAWAKLQKELLS  160 (203)
Q Consensus       136 ~~~~~C~~C~~~f~~~~~l~~H~~~  160 (203)
                      ...+.|..|+..|.+...+..|++-
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhee
Confidence            3668999999999999999999875

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=91.36  E-value=0.17  Score=35.66  Aligned_cols=70  Identities=21%  Similarity=0.356  Sum_probs=37.8

Q ss_pred             ecccccccccChh-----hHHHHHHHhcCCCCeeCc--chhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCCh
Q psy2103          23 QCEVCEKTFARHS-----TLWNHRRIHTGEKPYRCS--ICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDK   95 (203)
Q Consensus        23 ~C~~C~~~f~~~~-----~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~   95 (203)
                      .|++|...+....     .+..-+    ......|+  .|+..+ ....|..|..      .-.-.+..|+.|+..+ .+
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i----~~l~v~C~n~GC~~~~-~~~~l~~H~~------~C~~~~v~C~~C~~~~-~r  122 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREI----LSLMVKCPNEGCLHKM-ELRHLEDHQA------HCEFALMDCPQCQRPF-QK  122 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHH----HTSEEECCSTTCCCEE-EGGGHHHHHT------TCTTSEEECTTTCCEE-EG
T ss_pred             CCCCCccCcchhhhhhhHHHHHHH----hhcccCCCCCCCCcee-cHhHHHHHHh------cCCceeeECCCCChHH-HH
Confidence            6777776665431     111111    12345663  465544 3455666763      3334556777777776 45


Q ss_pred             HHHHHHHHH
Q psy2103          96 FALKRHRLI  104 (203)
Q Consensus        96 ~~L~~H~~~  104 (203)
                      ..|..|+..
T Consensus       123 ~~l~~H~~~  131 (170)
T 3hcs_A          123 FHINIHILK  131 (170)
T ss_dssp             GGHHHHHHH
T ss_pred             HHHHHHhhh
Confidence            567777653

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=88.96  E-value=0.55  Score=23.78  Aligned_cols=24  Identities=21%  Similarity=0.486  Sum_probs=16.4

Q ss_pred             CceecccccccccChhhHHHHHHH
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRI   43 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~   43 (203)
                      ..+.|..|+-+|.+...+..|++.
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhee
Confidence            346677777777777777777653

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=87.58  E-value=0.04  Score=33.31  Aligned_cols=37  Identities=24%  Similarity=0.633  Sum_probs=15.0

Q ss_pred             eec-ccccccccChhhHHHHHHHhcCCCCeeCcchhhhc
Q psy2103          22 YQC-EVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAF   59 (203)
Q Consensus        22 ~~C-~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f   59 (203)
                      ..| ..|+..+.. ..|..|+...-..+...|..|+..|
T Consensus        17 v~C~~~C~~~v~r-~~l~~H~~~~C~~r~v~C~~C~~~~   54 (76)
T 2yuc_A           17 IPCPNRCPMKLSR-RDLPAHLQHDCPKRRLKCEFCGCDF   54 (76)
T ss_dssp             CBCTTCCSCBCCS-SSSTTTTTTSCTTSCCCCSSSCCCC
T ss_pred             cCCCccccHHhhH-hHHHhhCHhhCCCcceECCCCCCcc
Confidence            344 345444432 2344443322233334455454444

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=86.93  E-value=0.22  Score=30.86  Aligned_cols=37  Identities=16%  Similarity=0.337  Sum_probs=27.4

Q ss_pred             CcccccchhhHhHHHHHHHHHHHhhccCCCccc-ccccccc
Q psy2103         136 LEEWKCESSRLIFEAWAKLQKELLSQSGYPYHK-LQSWRLS  175 (203)
Q Consensus       136 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-~~~~~~~  175 (203)
                      .....|-+||+.|..   |.+|+++++|..+.+ -.-|+++
T Consensus        19 ~d~iiClecGK~fK~---LkRHL~~~hgltpeeYR~kwGlp   56 (87)
T 2jsp_A           19 DDHIVCLECGGSFKS---LKRHLTTHHSMTPEEYREKWDLP   56 (87)
T ss_dssp             SSCEECTBTCCEESB---HHHHHHHTTCSCHHHHHHHTTCG
T ss_pred             CCceEecccchhhHH---HHHHHHHccCCCHHHHHHHhCCC
Confidence            356789999999985   779999988887665 3334444

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=86.86  E-value=0.35  Score=29.96  Aligned_cols=26  Identities=27%  Similarity=0.470  Sum_probs=19.4

Q ss_pred             ceecccccccccChhhHHHHHHHhcCCCC
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHTGEKP   49 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~   49 (203)
                      ...|-+||+.|++   |.+|+.+++|..+
T Consensus        21 ~iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           21 HIVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             CEECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             ceEecccchhhHH---HHHHHHHccCCCH
Confidence            3678888888884   7788888776543

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=86.14  E-value=0.57  Score=25.24  Aligned_cols=14  Identities=36%  Similarity=0.883  Sum_probs=8.2

Q ss_pred             CeeCcchhhhccCh
Q psy2103          49 PYRCSICGSAFNQA   62 (203)
Q Consensus        49 ~~~C~~C~~~f~~~   62 (203)
                      .|.|..||+.|+..
T Consensus         3 iY~C~rCg~~fs~~   16 (48)
T 4ayb_P            3 VYRCGKCWKTFTDE   16 (48)
T ss_dssp             --CCCCTTTTCCCC
T ss_pred             EEEeeccCCCccHH
Confidence            36677777777554

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=85.64  E-value=0.52  Score=22.57  Aligned_cols=22  Identities=23%  Similarity=0.344  Sum_probs=18.8

Q ss_pred             ceecccccccccChhhHHHHHH
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRR   42 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~   42 (203)
                      .|.|++|.....+...|..|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            4889999999999999988853

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=84.86  E-value=0.65  Score=22.73  Aligned_cols=25  Identities=28%  Similarity=0.502  Sum_probs=19.0

Q ss_pred             cccCCCCccCCChHHHHHHHHHhhh
Q psy2103          83 HHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        83 ~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      -.|..|.+.|+.-.+|..|++..|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4577888888888888888776543

>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...

Probab=82.57  E-value=0.67  Score=26.00  Aligned_cols=13  Identities=31%  Similarity=1.168  Sum_probs=7.2

Q ss_pred             CeeCcchhhhccC
Q psy2103          49 PYRCSICGSAFNQ   61 (203)
Q Consensus        49 ~~~C~~C~~~f~~   61 (203)
                      .|+|.+|++.+.-
T Consensus         3 ~y~C~vCGyvYd~   15 (54)
T 4rxn_A            3 KYTCTVCGYIYDP   15 (54)
T ss_dssp             CEEETTTCCEECT
T ss_pred             ceECCCCCeEECC
Confidence            3556666655543

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=82.42  E-value=0.54  Score=25.42  Aligned_cols=11  Identities=36%  Similarity=1.355  Sum_probs=5.8

Q ss_pred             eeCcchhhhcc
Q psy2103          50 YRCSICGSAFN   60 (203)
Q Consensus        50 ~~C~~C~~~f~   60 (203)
                      |+|.+||+.+.
T Consensus         5 y~C~vCGyvyd   15 (46)
T 6rxn_A            5 YVCNVCGYEYD   15 (46)
T ss_dssp             EEETTTCCEEC
T ss_pred             EECCCCCeEEe
Confidence            55555555543

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=81.96  E-value=1  Score=23.40  Aligned_cols=25  Identities=24%  Similarity=0.372  Sum_probs=19.5

Q ss_pred             CCceecccccccccChhhHHHHHHHh
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIH   44 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h   44 (203)
                      ...|.|+.|+..|.. ..+..|+-.|
T Consensus         7 ~~~~~C~~C~~~i~~-~~~~EH~D~H   31 (39)
T 2i5o_A            7 EDQVPCEKCGSLVPV-WDMPEHMDYH   31 (39)
T ss_dssp             CCEEECTTTCCEEEG-GGHHHHHHHH
T ss_pred             CCCcccccccCcCCc-ccccchhhHH
Confidence            345899999999998 5568887766

>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A

Probab=81.63  E-value=0.88  Score=25.27  Aligned_cols=13  Identities=31%  Similarity=1.091  Sum_probs=8.1

Q ss_pred             CeeCcchhhhccC
Q psy2103          49 PYRCSICGSAFNQ   61 (203)
Q Consensus        49 ~~~C~~C~~~f~~   61 (203)
                      .|+|..|++.+.-
T Consensus         3 ~y~C~~CGyvYd~   15 (52)
T 1e8j_A            3 IYVCTVCGYEYDP   15 (52)
T ss_dssp             CEECSSSCCCCCT
T ss_pred             cEEeCCCCeEEcC
Confidence            3667777766643

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=81.39  E-value=0.31  Score=29.57  Aligned_cols=15  Identities=27%  Similarity=0.591  Sum_probs=11.4

Q ss_pred             CCcccCCCCccCCCh
Q psy2103          81 KPHHCDICDVGFSDK   95 (203)
Q Consensus        81 ~~~~C~~C~~~f~~~   95 (203)
                      -.|+||.||..|-.+
T Consensus        50 F~FkCP~CgEEFyG~   64 (95)
T 2k5c_A           50 FVFKCPVCGEEFYGK   64 (95)
T ss_dssp             SEEECTTTCCEEETT
T ss_pred             HhhcCCCccHHHhcc
Confidence            458999999877544

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=81.15  E-value=0.62  Score=25.92  Aligned_cols=20  Identities=15%  Similarity=0.559  Sum_probs=18.0

Q ss_pred             eecccccccccChhhHHHHH
Q psy2103          22 YQCEVCEKTFARHSTLWNHR   41 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~   41 (203)
                      -.|.+|+..|..+..|+.|+
T Consensus        14 ~eC~lC~vkYs~r~slqDHI   33 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHI   33 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccccccCcccccccchhhhh
Confidence            58999999999999999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	203
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-12
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-10
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	5e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	9e-12
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-09
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-10
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-10
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	8e-08
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	8e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-09
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-07
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	4e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-09
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-09
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-08
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	4e-08
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	7e-06
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	4e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	7e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	5e-08
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	7e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.004
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-07
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-07
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	4e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	7e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-06
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-06
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	9e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	5e-06
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.002
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	9e-06
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	4e-05
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	5e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-05

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (136), Expect = 4e-12
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 17 SGERPYQCEVCEKTFARHSTLWNH-RRIHTGEKPYRCSI 54
          S  +PY C+ C K F+R   L  H +++HT E+P++C +
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (123), Expect = 3e-10
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 4/43 (9%)

Query: 45 TGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI 87
          +  KPY C  CG  F++  HL  H K    +VHT E+PH C +
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIK----QVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 5e-05
 Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)

Query: 3  FSQSPHLKNHER-IHSGERPYQCEV 26
          FS+  HL  H + +H+ ERP++C+V
Sbjct: 15 FSRPDHLNGHIKQVHTSERPHKCQV 39

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (134), Expect = 9e-12
 Identities = 20/33 (60%), Positives = 24/33 (72%)

Query: 15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE 47
          IHSGE+PY C  C K F+R S L  H+R+HTGE
Sbjct: 1  IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (115), Expect = 5e-09
 Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 5/38 (13%)

Query: 43 IHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE 80
          IH+GEKPY C  CG AF++++ L  H      +VHTGE
Sbjct: 1  IHSGEKPYGCVECGKAFSRSSILVQH-----QRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (99), Expect = 1e-06
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 76  VHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           +H+GEKP+ C  C   FS    L +H+ +H
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (124), Expect = 2e-10
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 14 RIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGEK 48
          R H+GE+PY C  C+KTF +   L  H + +    
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (107), Expect = 7e-08
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 5/40 (12%)

Query: 42 RIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEK 81
          R HTGEKPY CS C   F Q   L  H      K +    
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMH-----FKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 4e-06
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           + HTGEKP+ C  CD  F  K  L  H   +
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (124), Expect = 3e-10
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE 47
           E      R Y+C+ C K+F+  S L  HRR HTGE
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (106), Expect = 8e-08
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 5/41 (12%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE 80
                  + Y+C  CG +F+ ++ L  H      + HTGE
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKH-----RRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 8e-05
 Identities = 9/31 (29%), Positives = 12/31 (38%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
                 + + CD C   FS    L +HR  H
Sbjct: 5   WQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.6 bits (116), Expect = 3e-09
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTG 46
            R  +G +P+QC  C+++F+R   L  HR+ H  
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.6 bits (103), Expect = 2e-07
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 40 HRRIHTGEKPYRCSICGSAFNQATHLKNHAKV 71
            R  TG KP++C  C  +F+++ HL  H K 
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.4 bits (87), Expect = 4e-05
 Identities = 14/34 (41%), Positives = 15/34 (44%)

Query: 72  GKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           G  +  TG KP  C  CD  FS    L  HR  H
Sbjct: 1   GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (115), Expect = 5e-09
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 14 RIHSGERPYQCEVCEKTFARHSTLWNH-RRIHTGE 47
          R HSGE+PY+C +C   F +  T+  H  + HT  
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (113), Expect = 9e-09
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 42 RIHTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE 80
          R H+GEKPY C IC + F Q+  +K H      + HT  
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMH----ILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 8e-06
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 75  KVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           + H+GEKP+ C IC   F+    +K H L  
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 46.8 bits (112), Expect = 1e-08
 Identities = 15/29 (51%), Positives = 17/29 (58%)

Query: 20 RPYQCEVCEKTFARHSTLWNHRRIHTGEK 48
          R + CEVC + FAR   L  H R HT EK
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 38.4 bits (90), Expect = 1e-05
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 5/34 (14%)

Query: 48 KPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEK 81
          + + C +C  AF +  HLK H      + HT EK
Sbjct: 1  RSFVCEVCTRAFARQEHLKRH-----YRSHTNEK 29

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (108), Expect = 4e-08
 Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 22 YQCE--VCEKTFARHSTLWNHRRIHTGEKPYRC 52
          + C    C K+F     L  H ++H+  + Y C
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 7e-06
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 3  FSQSPHLKNHERIHSGERPYQCE 25
          F+   HLK H ++HS  R Y CE
Sbjct: 13 FNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 2e-04
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 7/39 (17%)

Query: 50 YRCS--ICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCD 86
          + C    CG +FN   HLK H      K+H+  + + C+
Sbjct: 2  FSCPEPACGKSFNFKKHLKEH-----MKLHSDTRDYICE 35

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 4e-08
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAKV 71
          ++ Y C+ C K+F   S    H  +H G +PY C +CG  F    HL  H K+
Sbjct: 1  DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 7e-06
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 3  FSQSPHLKNHERIHSGERPYQCEVCEKTFARHSTLWNHRRIH 44
          F+       H  +H G RPY C VC K F     L  H +IH
Sbjct: 12 FTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 2e-05
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 6/59 (10%)

Query: 47  EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH 105
           +K Y C  CG +F   +    H       +H G +P+ C +C   F  K  L  H  IH
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRH-----MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.9 bits (107), Expect = 5e-08
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 19 ERPYQCEVCEKTFARHSTLWNHRRIHTG 46
          ++P+QC +C + F+R   L  H R HTG
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.4 bits (85), Expect = 7e-05
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 5/33 (15%)

Query: 47 EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTG 79
          +KP++C IC   F+++ HL  H      + HTG
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTH-----IRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.4 bits (72), Expect = 0.004
 Identities = 10/26 (38%), Positives = 11/26 (42%)

Query: 80  EKPHHCDICDVGFSDKFALKRHRLIH 105
           +KP  C IC   FS    L  H   H
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTH 26

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (104), Expect = 2e-07
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 20 RPYQCEVCEKTFARHSTLWNHRRIHTGEK 48
          + + C  C K F R   L  H + H  +K
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 1e-04
 Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 5/34 (14%)

Query: 48 KPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEK 81
          K + C  C   F ++ HL  H      K H  +K
Sbjct: 1  KKFACPECPKRFMRSDHLSKH-----IKTHQNKK 29

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (102), Expect = 3e-07
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 16 HSGERPYQCEVCEKTFARHSTLWNHRRIHTGE 47
           SG+RP+ C +C   F   +    H ++HT  
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.4 bits (87), Expect = 4e-05
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 77  HTGEKPHHCDICDVGFSDKFALKRHRLIH 105
            +G++P  C IC   F+ K    RH  +H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.7 bits (85), Expect = 7e-05
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 5/37 (13%)

Query: 44 HTGEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGE 80
           +G++P+ C IC SAF    +   H      KVHT  
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARH-----LKVHTDT 33

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 1e-06
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 20 RPYQCEV--CEKTFARHSTLWNHRRIHTGEK 48
          RP+ C    C K F R   L  H+R HTGEK
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 6e-04
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 7/36 (19%)

Query: 48 KPYRCSI--CGSAFNQATHLKNHAKVGKCKVHTGEK 81
          +P+ C+   CG  F ++  L+ H      + HTGEK
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRH-----KRTHTGEK 31

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.8 bits (98), Expect = 1e-06
 Identities = 7/40 (17%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 11 NHERIHSGERPYQCEVCE--KTFARHSTLWNHRRIHTGEK 48
          +       ++ ++C      KTF R   + +H + H  ++
Sbjct: 8  DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.8 bits (77), Expect = 9e-04
 Identities = 5/45 (11%), Positives = 16/45 (35%), Gaps = 7/45 (15%)

Query: 39 NHRRIHTGEKPYRCSIC--GSAFNQATHLKNHAKVGKCKVHTGEK 81
          +       +K + C        F +  ++++H      + H  ++
Sbjct: 8  DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSH-----IQTHLEDR 47

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (93), Expect = 5e-06
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 20 RPYQC--EVCEKTFARHSTLWNHRRIHTGE 47
          +P++C  E C K+++R   L  H R HTGE
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.002
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 7/35 (20%)

Query: 48 KPYRCSI--CGSAFNQATHLKNHAKVGKCKVHTGE 80
          KP++C+   C  ++++  +LK H      + HTGE
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTH-----LRSHTGE 30

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (92), Expect = 9e-06
 Identities = 14/26 (53%), Positives = 20/26 (76%)

Query: 20 RPYQCEVCEKTFARHSTLWNHRRIHT 45
          +PY+C  C K F+++S L NH+RIHT
Sbjct: 1  KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.3 bits (87), Expect = 4e-05
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)

Query: 20 RPYQC--EVCEKTFARHSTLWNHRRIHTG 46
          RPY C  E C++ F+R + L  H RIHTG
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 5e-05
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 20 RPYQCEV--CEKTFARHSTLWNHRRIHTGE 47
          +P+QC    C K F+    L  H RIHTG+
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.9 bits (86), Expect = 5e-05
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 19 ERPYQCEV--CEKTFARHSTLWNHRRIHTGE 47
          +RPY C+   C+K F R+  L  H++ H  +
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	203
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.65
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.53
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.26
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.25
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.23
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.18
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.13
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.1
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.07
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.07
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.06
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.04
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.01
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.01
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.0
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.93
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.93
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.89
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.87
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.85
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.83
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.8
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.79
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.79
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.79
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.77
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.72
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.69
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.61
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.53
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.52
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.51
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.49
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.46
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.41
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.35
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.33
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.29
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.26
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.25
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.21
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.2
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.17
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.16
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.07
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.01
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.97
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.9
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.88
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.87
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.79
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.75
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.72
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.62
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.55
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.49
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.45
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.44
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.42
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.38
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.37
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.36
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.3
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.3
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.29
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.29
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.28
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.18
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.17
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.15
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.12
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.09
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.06
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.04
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.03
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.02
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.83
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.77
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.7
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.67
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.65
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.52
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.51
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.4
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.3
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.23
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.18
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.12
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.1
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.72
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.68
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.54
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.41
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.09
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.01
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.74
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.71
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.33
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.05
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.9
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.55
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.55
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.36
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.19
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.88
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.58
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.24
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.93
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.78
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	90.91
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	90.68
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	90.57
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	89.89
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	89.44
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	89.4
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.24
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	88.93
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	88.72
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	88.39
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	88.05
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	87.36
d1iroa_	53	Rubredoxin {Clostridium pasteurianum [TaxId: 1501]	85.53
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	84.62
d1brfa_	53	Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2	83.93
d1s24a_	56	Two-iron rubredoxin {Pseudomonas oleovorans [TaxId	83.26
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	83.07
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	82.96
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	81.94
d2dsxa1	52	Rubredoxin {Desulfovibrio gigas [TaxId: 879]}	80.62
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	80.51

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=6e-17  Score=92.83  Aligned_cols=51  Identities=37%  Similarity=0.859  Sum_probs=47.4

Q ss_pred             CCceecccccccccChhhHHHHHHHhcCCCCeeCcchhhhccChhHHHhhhh
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      |+||.|. ||+.|.....|..|+++|++++||.|..|++.|...+.|..|++
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHh
Confidence            5899995 99999999999999999999999999999999999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.4e-15  Score=86.94  Aligned_cols=53  Identities=34%  Similarity=0.734  Sum_probs=50.0

Q ss_pred             CCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCccCCChHHHHHHHHHh
Q psy2103          47 EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        47 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      |++|.|. ||+.|.....|..|++     .|.++++|.|+.|++.|.....|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~-----~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMS-----MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHH-----HHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhh-----ccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5799995 9999999999999996     899999999999999999999999999865

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.7e-13  Score=71.98  Aligned_cols=37  Identities=43%  Similarity=0.786  Sum_probs=32.5

Q ss_pred             HHHHHhCCCCceecccccccccChhhHHHHHHHhcCC
Q psy2103          11 NHERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        11 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +|+++|.+++||.|.+||+.|...+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4778889999999999999999999999999998875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.8e-12  Score=67.89  Aligned_cols=36  Identities=39%  Similarity=0.931  Sum_probs=29.3

Q ss_pred             CCceecccccccccChhhHHHHHH-HhcCCCCeeCcc
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRR-IHTGEKPYRCSI   54 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~   54 (203)
                      ++||.|.+||+.|.....|..||+ +|++++||.|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            578888888888888888888875 688888888863

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.9e-12  Score=64.51  Aligned_cols=33  Identities=61%  Similarity=1.130  Sum_probs=30.2

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCC
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +|.+++||+|.+|++.|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            488999999999999999999999999999875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=6.2e-12  Score=64.93  Aligned_cols=34  Identities=38%  Similarity=0.721  Sum_probs=30.5

Q ss_pred             HHhCCCCceecccccccccChhhHHHHHHHhcCC
Q psy2103          14 RIHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        14 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      ++|.|++||.|.+|++.|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4688999999999999999999999999999876

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=3.9e-12  Score=66.15  Aligned_cols=35  Identities=34%  Similarity=0.685  Sum_probs=27.2

Q ss_pred             HHHHhCCCCceecccccccccChhhHHHHHHHhcC
Q psy2103          12 HERIHSGERPYQCEVCEKTFARHSTLWNHRRIHTG   46 (203)
Q Consensus        12 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   46 (203)
                      |.++|.+++||+|++|++.|.....|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            45678888888888888888888888888877753

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=2.3e-11  Score=61.98  Aligned_cols=32  Identities=31%  Similarity=0.760  Sum_probs=27.7

Q ss_pred             hCCCCceecccccccccChhhHHHHHHHhcCC
Q psy2103          16 HSGERPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        16 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      |.|++||.|.+|++.|.....|..|+++|.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            67889999999999999999999999888764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=3.2e-11  Score=58.16  Aligned_cols=28  Identities=43%  Similarity=1.000  Sum_probs=25.6

Q ss_pred             CCceecccccccccChhhHHHHHHHhcC
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIHTG   46 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~   46 (203)
                      |+||.|.+|++.|.....|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999976

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=4.2e-11  Score=62.56  Aligned_cols=38  Identities=47%  Similarity=1.050  Sum_probs=34.4

Q ss_pred             CCCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          46 GEKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        46 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      .++||.|..||+.|....+|..|++    +.|.+++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r----~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIK----QVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHH----HTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCc----CccCCCcCcCCcC
Confidence            4689999999999999999999986    3799999999974

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.06  E-value=3.5e-11  Score=58.70  Aligned_cols=29  Identities=52%  Similarity=0.927  Sum_probs=25.8

Q ss_pred             CceecccccccccChhhHHHHHHHhcCCC
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGEK   48 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   48 (203)
                      +||.|++|++.|.....|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58999999999999999999999998874

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=4.3e-11  Score=61.57  Aligned_cols=33  Identities=36%  Similarity=0.727  Sum_probs=26.4

Q ss_pred             HhCCCCceecccccccccChhhHHHHHHHhcCC
Q psy2103          15 IHSGERPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        15 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +|.|++||.|++|++.|....+|..|++.++++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            578888888888888888888888887665543

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.01  E-value=1e-10  Score=60.64  Aligned_cols=34  Identities=38%  Similarity=0.530  Sum_probs=26.3

Q ss_pred             CccccCCCCCcccCCCCccCCChHHHHHHHHHhh
Q psy2103          73 KCKVHTGEKPHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        73 ~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      |.|.|++++||.|+.|++.|...+.|..|+++|-
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            4467888888888888888888888888877763

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.01  E-value=1.1e-11  Score=67.76  Aligned_cols=41  Identities=20%  Similarity=0.512  Sum_probs=35.6

Q ss_pred             hHHHHHHHHhCCCCceeccc--ccccccChhhHHHHHHHhcCCC
Q psy2103           7 PHLKNHERIHSGERPYQCEV--CEKTFARHSTLWNHRRIHTGEK   48 (203)
Q Consensus         7 ~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~   48 (203)
                      +.|..|+. |.+++||.|.+  |++.|...+.|..|+++|+|++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            45667774 89999999988  9999999999999999999874

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=9.6e-11  Score=57.01  Aligned_cols=29  Identities=31%  Similarity=0.679  Sum_probs=25.7

Q ss_pred             CceecccccccccChhhHHHHHHHhcCCC
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGEK   48 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   48 (203)
                      +||.|++|++.|...+.|..|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58999999999999999999999998874

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.3e-10  Score=58.61  Aligned_cols=32  Identities=28%  Similarity=0.745  Sum_probs=28.7

Q ss_pred             eeccc--ccccccChhhHHHHHHHhcCCCCeeCc
Q psy2103          22 YQCEV--CEKTFARHSTLWNHRRIHTGEKPYRCS   53 (203)
Q Consensus        22 ~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~   53 (203)
                      |.|++  |++.|.....|.+|+++|+|++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            78887  999999999999999999999999886

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.9e-10  Score=58.44  Aligned_cols=32  Identities=41%  Similarity=0.590  Sum_probs=22.6

Q ss_pred             ccCCCCCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          76 VHTGEKPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        76 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      .|+|++||.|..|++.|...+.|..|+++|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            56777777777777777777777777777654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=3.9e-10  Score=58.76  Aligned_cols=33  Identities=27%  Similarity=0.463  Sum_probs=22.4

Q ss_pred             cccCCCCCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          75 KVHTGEKPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        75 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      +.|.+++||.|+.|++.|...+.|..|+++|.+
T Consensus         5 ~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           5 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            466677777777777777777777777666643

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=7.1e-10  Score=56.90  Aligned_cols=31  Identities=39%  Similarity=0.713  Sum_probs=22.0

Q ss_pred             ccCCCCCcccCCCCccCCChHHHHHHHHHhh
Q psy2103          76 VHTGEKPHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        76 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      .|+|++||.|+.|++.|....+|..|++.+|
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            5677777777777777777777777765554

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=7.6e-10  Score=55.41  Aligned_cols=30  Identities=40%  Similarity=0.719  Sum_probs=17.5

Q ss_pred             cCCCCCcccCCCCccCCChHHHHHHHHHhh
Q psy2103          77 HTGEKPHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        77 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      |++++||.|..|++.|...+.|..|+++|.
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccC
Confidence            455555666666666666666666655554

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=8.7e-10  Score=51.69  Aligned_cols=26  Identities=54%  Similarity=1.069  Sum_probs=22.9

Q ss_pred             CceecccccccccChhhHHHHHHHhc
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHT   45 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~   45 (203)
                      +||+|.+||+.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58999999999999999999998874

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.4e-09  Score=53.20  Aligned_cols=28  Identities=46%  Similarity=0.960  Sum_probs=25.5

Q ss_pred             Cceeccc--ccccccChhhHHHHHHHhcCC
Q psy2103          20 RPYQCEV--CEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        20 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +||.|++  |++.|.....|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899988  999999999999999999885

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.79  E-value=5e-10  Score=54.49  Aligned_cols=29  Identities=17%  Similarity=0.303  Sum_probs=26.9

Q ss_pred             cccccchhhHhHHHHHHHHHHHhhccCCC
Q psy2103         137 EEWKCESSRLIFEAWAKLQKELLSQSGYP  165 (203)
Q Consensus       137 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  165 (203)
                      .+|.|++||+.|...+.|.+|+++|+|+.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            37999999999999999999999999873

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.79  E-value=1.1e-09  Score=55.52  Aligned_cols=29  Identities=34%  Similarity=0.715  Sum_probs=17.0

Q ss_pred             cCCCCCcccCCCCccCCChHHHHHHHHHh
Q psy2103          77 HTGEKPHHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        77 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      |+|++||.|..|++.|+...+|..|+++|
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~H   30 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcccc
Confidence            34555666666666666666666665555

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.6e-09  Score=52.93  Aligned_cols=28  Identities=43%  Similarity=0.878  Sum_probs=25.1

Q ss_pred             Cceeccc--ccccccChhhHHHHHHHhcCC
Q psy2103          20 RPYQCEV--CEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        20 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +||.|.+  |++.|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5899998  999999999999999999875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.77  E-value=2.1e-09  Score=51.64  Aligned_cols=27  Identities=37%  Similarity=0.618  Sum_probs=20.1

Q ss_pred             CCCcccCCCCccCCChHHHHHHHHHhh
Q psy2103          80 EKPHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        80 ~~~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      ++||+|+.|++.|...+.|..|+++|.
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCcc
Confidence            467777777777777777777777775

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=9.3e-10  Score=53.42  Aligned_cols=29  Identities=14%  Similarity=0.254  Sum_probs=26.8

Q ss_pred             cccccchhhHhHHHHHHHHHHHhhccCCC
Q psy2103         137 EEWKCESSRLIFEAWAKLQKELLSQSGYP  165 (203)
Q Consensus       137 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  165 (203)
                      .+|.|++||+.|...+.|.+|+++|+|+.
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            37999999999999999999999999873

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=3.5e-09  Score=52.19  Aligned_cols=29  Identities=52%  Similarity=1.007  Sum_probs=23.6

Q ss_pred             Cceeccc--ccccccChhhHHHHHHHhcCCC
Q psy2103          20 RPYQCEV--CEKTFARHSTLWNHRRIHTGEK   48 (203)
Q Consensus        20 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~   48 (203)
                      +||.|++  |++.|...+.|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            5788864  8888888888888888888874

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.2e-08  Score=47.67  Aligned_cols=25  Identities=40%  Similarity=0.673  Sum_probs=20.8

Q ss_pred             CCcccCCCCccCCChHHHHHHHHHh
Q psy2103          81 KPHHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        81 ~~~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      +||+|..||+.|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            5788888888888888888888877

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.53  E-value=1.7e-08  Score=48.67  Aligned_cols=27  Identities=56%  Similarity=1.146  Sum_probs=23.5

Q ss_pred             Cceeccc--ccccccChhhHHHHHHHhcC
Q psy2103          20 RPYQCEV--CEKTFARHSTLWNHRRIHTG   46 (203)
Q Consensus        20 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~   46 (203)
                      +||.|++  |++.|.....|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5889988  99999999999999988875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.52  E-value=2.5e-08  Score=49.30  Aligned_cols=28  Identities=39%  Similarity=0.991  Sum_probs=22.4

Q ss_pred             CCceeccc--ccccccChhhHHHHHHHhcC
Q psy2103          19 ERPYQCEV--CEKTFARHSTLWNHRRIHTG   46 (203)
Q Consensus        19 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~   46 (203)
                      |+||.|.+  |++.|.....|.+|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            57788887  88888888888888888765

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.51  E-value=8e-09  Score=56.12  Aligned_cols=32  Identities=19%  Similarity=0.474  Sum_probs=21.4

Q ss_pred             ccCCCCCcccCC--CCccCCChHHHHHHHHHhhh
Q psy2103          76 VHTGEKPHHCDI--CDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        76 ~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~~~  107 (203)
                      .|.++++|.|++  |++.|...+.|..|+++|.+
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            366667777755  77777777777777766654

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=1e-08  Score=49.97  Aligned_cols=28  Identities=25%  Similarity=0.406  Sum_probs=25.7

Q ss_pred             cccccch--hhHhHHHHHHHHHHHhhccCC
Q psy2103         137 EEWKCES--SRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       137 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      .+|.|+.  ||+.|...+.|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            3689977  999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=2.3e-08  Score=50.94  Aligned_cols=33  Identities=36%  Similarity=0.868  Sum_probs=29.8

Q ss_pred             eeCcc--hhhhccChhHHHhhhhcCCccccCCCCCcccCC
Q psy2103          50 YRCSI--CGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDI   87 (203)
Q Consensus        50 ~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~   87 (203)
                      |.|+.  |++.|.....|.+|++     .|++++||.|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r-----~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMK-----LHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHH-----HHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccC-----eeCCCCCEeCCC
Confidence            78887  9999999999999996     899999999973

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=4.4e-08  Score=46.69  Aligned_cols=26  Identities=42%  Similarity=0.857  Sum_probs=22.4

Q ss_pred             Cceeccc--ccccccChhhHHHHHHHhc
Q psy2103          20 RPYQCEV--CEKTFARHSTLWNHRRIHT   45 (203)
Q Consensus        20 ~~~~C~~--C~~~f~~~~~L~~H~~~h~   45 (203)
                      +||.|++  |++.|.....|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5888988  9999999999999998874

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.4e-07  Score=45.91  Aligned_cols=27  Identities=41%  Similarity=0.775  Sum_probs=19.8

Q ss_pred             CCcccCC--CCccCCChHHHHHHHHHhhh
Q psy2103          81 KPHHCDI--CDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        81 ~~~~C~~--C~~~f~~~~~L~~H~~~~~~  107 (203)
                      +||.|++  |++.|...+.|..|+++|.+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            4677766  77777777777777777754

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=5.2e-08  Score=47.85  Aligned_cols=29  Identities=17%  Similarity=0.270  Sum_probs=25.8

Q ss_pred             ccccc--chhhHhHHHHHHHHHHHhhccCCC
Q psy2103         137 EEWKC--ESSRLIFEAWAKLQKELLSQSGYP  165 (203)
Q Consensus       137 ~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~  165 (203)
                      .+|.|  +.||+.|...+.|.+|+++|+|+.
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            36889  579999999999999999999873

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=2.4e-07  Score=43.20  Aligned_cols=29  Identities=41%  Similarity=0.858  Sum_probs=25.6

Q ss_pred             CCceecccccccccChhhHHHHHHHhcCC
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      ++||.|++|+.+|+.+..+.-|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57899999999999999999999998764

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.26  E-value=2.6e-07  Score=42.43  Aligned_cols=26  Identities=38%  Similarity=0.986  Sum_probs=19.2

Q ss_pred             CCceecccccccccChhhHHHHHHHh
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIH   44 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h   44 (203)
                      ++||.|.+||+.|.......+|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            46777777777777777777777666

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=1.5e-07  Score=41.85  Aligned_cols=26  Identities=54%  Similarity=0.984  Sum_probs=17.6

Q ss_pred             ceecccccccccChhhHHHHHHHhcC
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHTG   46 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~~   46 (203)
                      |.+|.+|++-|..+..|..||+.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            35677777777777777777776654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=3.1e-07  Score=43.63  Aligned_cols=25  Identities=36%  Similarity=0.739  Sum_probs=21.7

Q ss_pred             CCcccCC--CCccCCChHHHHHHHHHh
Q psy2103          81 KPHHCDI--CDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        81 ~~~~C~~--C~~~f~~~~~L~~H~~~~  105 (203)
                      +||.|++  |++.|.+.++|.+|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            5788877  999999999999998887

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.20  E-value=3.6e-07  Score=43.90  Aligned_cols=26  Identities=42%  Similarity=0.781  Sum_probs=19.2

Q ss_pred             CCcccCC--CCccCCChHHHHHHHHHhh
Q psy2103          81 KPHHCDI--CDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        81 ~~~~C~~--C~~~f~~~~~L~~H~~~~~  106 (203)
                      +||.|++  |++.|.+.+.|..|+++|.
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            4677766  7777777777777777764

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.17  E-value=4.2e-07  Score=44.72  Aligned_cols=28  Identities=36%  Similarity=0.786  Sum_probs=22.6

Q ss_pred             CCCcccCC--CCccCCChHHHHHHHHHhhh
Q psy2103          80 EKPHHCDI--CDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        80 ~~~~~C~~--C~~~f~~~~~L~~H~~~~~~  107 (203)
                      ++||.|++  |++.|.+.+.|.+|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46788877  88888888888888888743

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=2e-07  Score=41.39  Aligned_cols=25  Identities=28%  Similarity=0.460  Sum_probs=23.4

Q ss_pred             cccchhhHhHHHHHHHHHHHhhccC
Q psy2103         139 WKCESSRLIFEAWAKLQKELLSQSG  163 (203)
Q Consensus       139 ~~C~~C~~~f~~~~~l~~H~~~h~~  163 (203)
                      .+|+.||+.|..+..|..||+.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            5799999999999999999999985

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=8.3e-07  Score=42.30  Aligned_cols=31  Identities=42%  Similarity=0.820  Sum_probs=24.5

Q ss_pred             CceecccccccccChhhHHHHHHHhcCCCCe
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGEKPY   50 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~   50 (203)
                      +...|..||+.|.....|.+|..+|++++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3467888888888888888888888888876

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.5e-06  Score=39.49  Aligned_cols=28  Identities=43%  Similarity=0.801  Sum_probs=16.8

Q ss_pred             CCceecccccccccChhhHHHHHHHhcC
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIHTG   46 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~   46 (203)
                      ++||+|++|...-.+.+.|..|++.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            3566666666665666666666666554

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=3e-06  Score=39.39  Aligned_cols=27  Identities=33%  Similarity=0.828  Sum_probs=21.6

Q ss_pred             Cceeccc--ccccccChhhHHHHHHHhcC
Q psy2103          20 RPYQCEV--CEKTFARHSTLWNHRRIHTG   46 (203)
Q Consensus        20 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~   46 (203)
                      +||.|.+  |++++...++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5788887  88888888888888887664

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.90  E-value=4.6e-06  Score=41.74  Aligned_cols=29  Identities=28%  Similarity=0.705  Sum_probs=24.0

Q ss_pred             CCceecccccccccChhhHHHHHHHhcCC
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      .+.|.|.+|++.|.+..+|..||+.|..+
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcch
Confidence            45688999999999999999998888654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.88  E-value=2.9e-06  Score=38.85  Aligned_cols=25  Identities=48%  Similarity=0.818  Sum_probs=15.6

Q ss_pred             CCcccCCCCccCCChHHHHHHHHHh
Q psy2103          81 KPHHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        81 ~~~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      +||.|.+||+.|.......+|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            5566666666666666666665554

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=5e-06  Score=38.64  Aligned_cols=28  Identities=32%  Similarity=0.618  Sum_probs=22.2

Q ss_pred             CCCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          80 EKPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        80 ~~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      ++||.|++|...|..+..+.-|.+.|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4678888888888888888888888754

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=9.1e-06  Score=37.09  Aligned_cols=26  Identities=38%  Similarity=0.561  Sum_probs=23.6

Q ss_pred             eecccccccccChhhHHHHHHHhcCC
Q psy2103          22 YQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      |.|++|+...+-++.|+.|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            78999999999999999999999886

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.75  E-value=1e-05  Score=35.95  Aligned_cols=26  Identities=46%  Similarity=0.761  Sum_probs=23.8

Q ss_pred             ecccccccccChhhHHHHHHHhcCCC
Q psy2103          23 QCEVCEKTFARHSTLWNHRRIHTGEK   48 (203)
Q Consensus        23 ~C~~C~~~f~~~~~L~~H~~~h~~~~   48 (203)
                      +|+.|.++|.++..|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999874

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.1e-05  Score=36.79  Aligned_cols=23  Identities=30%  Similarity=0.752  Sum_probs=15.9

Q ss_pred             ceecccccccccChhhHHHHHHH
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRI   43 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~   43 (203)
                      ||.|..|+..|+++.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            56677777777777777777664

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.62  E-value=3.3e-05  Score=35.15  Aligned_cols=29  Identities=45%  Similarity=0.795  Sum_probs=24.8

Q ss_pred             CCceecccccccccChhhHHHHHHHhcCC
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +.-|.|.+|...|...-.|+.||.+|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34588999999999999999999998874

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=7.4e-06  Score=37.00  Aligned_cols=26  Identities=23%  Similarity=0.362  Sum_probs=23.8

Q ss_pred             cccchhhHhHHHHHHHHHHHhhccCC
Q psy2103         139 WKCESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       139 ~~C~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      ..|..||+.|...+.|.+|...|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46999999999999999999999875

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=2.8e-05  Score=36.04  Aligned_cols=25  Identities=24%  Similarity=0.602  Sum_probs=15.3

Q ss_pred             CcccCC--CCccCCChHHHHHHHHHhh
Q psy2103          82 PHHCDI--CDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        82 ~~~C~~--C~~~f~~~~~L~~H~~~~~  106 (203)
                      ||.|..  |++.|...+.|+.|++.+|
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            555644  6666666666666666544

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=4.4e-05  Score=34.55  Aligned_cols=23  Identities=30%  Similarity=0.805  Sum_probs=14.6

Q ss_pred             CCeeCcchhhhccChhHHHhhhh
Q psy2103          48 KPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        48 ~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      +||+|..|++.-.+.+.|..|++
T Consensus         2 rpfkcqlcsy~srnssqltvhlr   24 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLR   24 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHT
T ss_pred             CcceeeecccccCCchheEEeee
Confidence            46666666666666666666664

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=6.1e-05  Score=33.81  Aligned_cols=26  Identities=42%  Similarity=0.890  Sum_probs=22.0

Q ss_pred             CceecccccccccChhhHHHHHHHhc
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHT   45 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~   45 (203)
                      +||+|..|+..-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68888888888888888888888875

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=5.3e-05  Score=35.93  Aligned_cols=31  Identities=45%  Similarity=0.867  Sum_probs=26.4

Q ss_pred             CCeeCcchhhhccChhHHHhhhhcCCccccCCCCCc
Q psy2103          48 KPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPH   83 (203)
Q Consensus        48 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~   83 (203)
                      +...|..||+.|.....|.+|..     +|.+++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhkl-----shs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKL-----SHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGG-----GSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhc-----ccCCCCCC
Confidence            45679999999999999999987     78888887

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=2.1e-05  Score=35.89  Aligned_cols=26  Identities=15%  Similarity=0.295  Sum_probs=24.5

Q ss_pred             cccchhhHhHHHHHHHHHHHhhccCC
Q psy2103         139 WKCESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       139 ~~C~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      |.|+.||......+.|..|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            78999999999999999999999875

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=6.4e-05  Score=34.40  Aligned_cols=27  Identities=33%  Similarity=0.571  Sum_probs=19.2

Q ss_pred             CceecccccccccChhhHHHHHHHhcC
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTG   46 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~   46 (203)
                      +||.|+.|..+....++|..|+++.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            467777777777777777777765543

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.36  E-value=2e-05  Score=35.02  Aligned_cols=26  Identities=15%  Similarity=0.166  Sum_probs=24.2

Q ss_pred             ccchhhHhHHHHHHHHHHHhhccCCC
Q psy2103         140 KCESSRLIFEAWAKLQKELLSQSGYP  165 (203)
Q Consensus       140 ~C~~C~~~f~~~~~l~~H~~~h~~~~  165 (203)
                      +|+.|.+.|.++..|..|-+.|+|+.
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            59999999999999999999999873

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.30  E-value=9.8e-05  Score=33.65  Aligned_cols=28  Identities=43%  Similarity=0.841  Sum_probs=23.4

Q ss_pred             Cceeccc--ccccccChhhHHHHHHHhcCC
Q psy2103          20 RPYQCEV--CEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        20 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +||+|..  |.+.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5788887  889999999999998888764

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=8.5e-05  Score=37.26  Aligned_cols=28  Identities=36%  Similarity=0.574  Sum_probs=24.5

Q ss_pred             CCCCCcccCCCCccCCChHHHHHHHHHh
Q psy2103          78 TGEKPHHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        78 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      +|-+||.|..|++.|..++.+.+|....
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhh
Confidence            3678999999999999999999997554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.29  E-value=2.3e-05  Score=35.66  Aligned_cols=28  Identities=18%  Similarity=0.421  Sum_probs=26.2

Q ss_pred             cccccchhhHhHHHHHHHHHHHhhccCC
Q psy2103         137 EEWKCESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       137 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      ..|.|..|...|...-.|+.||..|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            5799999999999999999999999875

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.29  E-value=2.3e-05  Score=34.24  Aligned_cols=24  Identities=17%  Similarity=0.259  Sum_probs=22.3

Q ss_pred             cccchhhHhHHHHHHHHHHHhhcc
Q psy2103         139 WKCESSRLIFEAWAKLQKELLSQS  162 (203)
Q Consensus       139 ~~C~~C~~~f~~~~~l~~H~~~h~  162 (203)
                      |+|..|.+.|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999874

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=0.00012  Score=36.76  Aligned_cols=25  Identities=32%  Similarity=0.884  Sum_probs=21.4

Q ss_pred             CCCceecccccccccChhhHHHHHH
Q psy2103          18 GERPYQCEVCEKTFARHSTLWNHRR   42 (203)
Q Consensus        18 ~~~~~~C~~C~~~f~~~~~L~~H~~   42 (203)
                      |.+||.|.+|++.|....++.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            6689999999999999988888864

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00011  Score=33.07  Aligned_cols=21  Identities=38%  Similarity=0.749  Sum_probs=12.6

Q ss_pred             eeCcchhhhccChhHHHhhhh
Q psy2103          50 YRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      ..|..||+.|...+.|.+|..
T Consensus         3 hvc~ecgkaf~essklkrh~l   23 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQL   23 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGG
T ss_pred             chHHHHhHHHHHHHHHHHHhh
Confidence            356666666666666666654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=8.1e-05  Score=33.88  Aligned_cols=22  Identities=36%  Similarity=0.899  Sum_probs=16.3

Q ss_pred             CeeCcchhhhccChhHHHhhhh
Q psy2103          49 PYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      ||.|..|+..|.++.+|..||+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            5677777777777777777775

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.15  E-value=7.3e-05  Score=32.61  Aligned_cols=23  Identities=43%  Similarity=1.076  Sum_probs=13.1

Q ss_pred             eecccccccccChhhHHHHHHHh
Q psy2103          22 YQCEVCEKTFARHSTLWNHRRIH   44 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~~h   44 (203)
                      |+|.+|.+.|--++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45555555555555555555544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.12  E-value=0.00021  Score=32.40  Aligned_cols=25  Identities=44%  Similarity=0.697  Sum_probs=19.9

Q ss_pred             CCcccCC--CCccCCChHHHHHHHHHh
Q psy2103          81 KPHHCDI--CDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        81 ~~~~C~~--C~~~f~~~~~L~~H~~~~  105 (203)
                      .+|+|+.  |++.|...+.|.+|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4678866  888888888888887766

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00024  Score=32.35  Aligned_cols=27  Identities=19%  Similarity=0.460  Sum_probs=21.1

Q ss_pred             CCcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          81 KPHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        81 ~~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      +||+|+.|.......++|..|++.-|+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            468888888888888888888776654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.06  E-value=0.00018  Score=33.52  Aligned_cols=22  Identities=41%  Similarity=0.937  Sum_probs=11.3

Q ss_pred             CeeCcchhhhccChhHHHhhhh
Q psy2103          49 PYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        49 ~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      ||.|.+|++.|..+..|.+|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            3455555555555555555544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.04  E-value=0.00029  Score=31.87  Aligned_cols=25  Identities=40%  Similarity=0.891  Sum_probs=18.6

Q ss_pred             Cceeccc--ccccccChhhHHHHHHHh
Q psy2103          20 RPYQCEV--CEKTFARHSTLWNHRRIH   44 (203)
Q Consensus        20 ~~~~C~~--C~~~f~~~~~L~~H~~~h   44 (203)
                      .||.|+-  |++.|...+.|.+|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677775  778888888888777665

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.03  E-value=9.2e-05  Score=36.89  Aligned_cols=28  Identities=11%  Similarity=0.171  Sum_probs=25.5

Q ss_pred             cccccchhhHhHHHHHHHHHHHhhccCC
Q psy2103         137 EEWKCESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       137 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      ..|.|.+|++.|.+..+|--||+.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            5699999999999999999999999654

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.00029  Score=32.07  Aligned_cols=27  Identities=30%  Similarity=0.638  Sum_probs=18.1

Q ss_pred             CceecccccccccChhhHHHHHHHhcC
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTG   46 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~   46 (203)
                      +||+|..|..-.+..++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            467777777777777777777665443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00056  Score=33.72  Aligned_cols=28  Identities=25%  Similarity=0.713  Sum_probs=18.5

Q ss_pred             CCCceeccc--ccccccChhhHHHHHHHhc
Q psy2103          18 GERPYQCEV--CEKTFARHSTLWNHRRIHT   45 (203)
Q Consensus        18 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~   45 (203)
                      .++||.|..  |+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            356777754  7777777777777766553

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.77  E-value=0.0002  Score=33.39  Aligned_cols=26  Identities=27%  Similarity=0.548  Sum_probs=22.7

Q ss_pred             CcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          82 PHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        82 ~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      ||.|..|++.|..++.|.+|...-|+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            68999999999999999999765443

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.00095  Score=30.38  Aligned_cols=25  Identities=24%  Similarity=0.441  Sum_probs=13.6

Q ss_pred             CcccCCCCccCCChHHHHHHHHHhh
Q psy2103          82 PHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        82 ~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      ||.|..|.+.....++|..|+++.|
T Consensus         2 py~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             Cccccccccccccchhhhhhhhccc
Confidence            4555555555555555555555544

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.00066  Score=30.35  Aligned_cols=25  Identities=40%  Similarity=0.763  Sum_probs=16.8

Q ss_pred             CCcccCCCCccCCChHHHHHHHHHh
Q psy2103          81 KPHHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        81 ~~~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      +||+|..|.+.-...+.|..|+++|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            4666766776666666777776665

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.00087  Score=33.02  Aligned_cols=28  Identities=32%  Similarity=0.590  Sum_probs=22.1

Q ss_pred             CCCCccc--CCCCccCCChHHHHHHHHHhh
Q psy2103          79 GEKPHHC--DICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        79 ~~~~~~C--~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      +++||.|  +.|+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4788888  558888888888888887774

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.52  E-value=0.0013  Score=28.49  Aligned_cols=22  Identities=32%  Similarity=0.809  Sum_probs=16.0

Q ss_pred             ceecccccccccChhhHHHHHH
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRR   42 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~   42 (203)
                      ||+|..|...|..+..|+.||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6777777777777777777764

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.00066  Score=31.60  Aligned_cols=26  Identities=42%  Similarity=0.892  Sum_probs=14.0

Q ss_pred             Cceeccc--ccccccChhhHHHHH-HHhc
Q psy2103          20 RPYQCEV--CEKTFARHSTLWNHR-RIHT   45 (203)
Q Consensus        20 ~~~~C~~--C~~~f~~~~~L~~H~-~~h~   45 (203)
                      +||.|.+  |.+.|.+.+.-..|+ ++|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            3555555  555555555555554 4443

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.00099  Score=29.84  Aligned_cols=24  Identities=33%  Similarity=0.700  Sum_probs=17.5

Q ss_pred             ceecccccccccChhhHHHHHHHh
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIH   44 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h   44 (203)
                      |-+|+.|.+...++..|+.|.+.|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            346777777777777777777766

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.30  E-value=0.0016  Score=28.91  Aligned_cols=22  Identities=27%  Similarity=0.501  Sum_probs=19.3

Q ss_pred             CcccCCCCccCCChHHHHHHHH
Q psy2103          82 PHHCDICDVGFSDKFALKRHRL  103 (203)
Q Consensus        82 ~~~C~~C~~~f~~~~~L~~H~~  103 (203)
                      ||+|+.||+.|-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6899999999999999988854

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0011  Score=31.87  Aligned_cols=26  Identities=38%  Similarity=0.726  Sum_probs=18.9

Q ss_pred             eeccc--cc---ccccChhhHHHHHHHhcCC
Q psy2103          22 YQCEV--CE---KTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        22 ~~C~~--C~---~~f~~~~~L~~H~~~h~~~   47 (203)
                      |.|.+  |.   +.|+....|..|||.|+||
T Consensus         3 y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           3 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             eEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            55554  54   4588888888888888875

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.18  E-value=0.00056  Score=35.49  Aligned_cols=26  Identities=12%  Similarity=0.167  Sum_probs=23.9

Q ss_pred             CcccccchhhHhHHHHHHHHHHHhhc
Q psy2103         136 LEEWKCESSRLIFEAWAKLQKELLSQ  161 (203)
Q Consensus       136 ~~~~~C~~C~~~f~~~~~l~~H~~~h  161 (203)
                      ...|.|..||+.|.....|+.|...|
T Consensus         4 ~~l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           4 AGILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             cceeeccccccccCCHHHHhHhHHhc
Confidence            35789999999999999999999987

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.12  E-value=0.002  Score=27.89  Aligned_cols=21  Identities=33%  Similarity=0.657  Sum_probs=12.1

Q ss_pred             CcccCCCCccCCChHHHHHHH
Q psy2103          82 PHHCDICDVGFSDKFALKRHR  102 (203)
Q Consensus        82 ~~~C~~C~~~f~~~~~L~~H~  102 (203)
                      +|+|+.|...|..+..|+.|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            455555555555555555554

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.10  E-value=0.0028  Score=27.56  Aligned_cols=23  Identities=35%  Similarity=0.736  Sum_probs=19.7

Q ss_pred             eecccccccccChhhHHHHHHHh
Q psy2103          22 YQCEVCEKTFARHSTLWNHRRIH   44 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~~h   44 (203)
                      |+|+.|-+.|..+.++..|.++-
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            78999999999999999888754

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.72  E-value=0.0025  Score=28.47  Aligned_cols=23  Identities=39%  Similarity=0.657  Sum_probs=13.9

Q ss_pred             cccCCCCccCCChHHHHHHHHHh
Q psy2103          83 HHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        83 ~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      .+|+.|.++.+++..|+.|-+.|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            45666666666666666665554

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.68  E-value=0.0048  Score=31.86  Aligned_cols=26  Identities=27%  Similarity=0.515  Sum_probs=23.2

Q ss_pred             CCcccCCCCccCCChHHHHHHHHHhh
Q psy2103          81 KPHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        81 ~~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      ..|.|..|++.|.....|+.|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45899999999999999999988874

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.0053  Score=29.11  Aligned_cols=26  Identities=19%  Similarity=0.368  Sum_probs=20.0

Q ss_pred             CcccCCCCccCCChHHHHHHHHHhhh
Q psy2103          82 PHHCDICDVGFSDKFALKRHRLIHEK  107 (203)
Q Consensus        82 ~~~C~~C~~~f~~~~~L~~H~~~~~~  107 (203)
                      .|.|+.|++.|..+..+.+|.....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47888888888888888888776544

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.41  E-value=0.0042  Score=27.52  Aligned_cols=21  Identities=33%  Similarity=0.896  Sum_probs=10.9

Q ss_pred             ceecccccccccChhhHHHHH
Q psy2103          21 PYQCEVCEKTFARHSTLWNHR   41 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~   41 (203)
                      ||+|..||+.+..+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            345555555555555555543

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.09  E-value=0.0053  Score=27.29  Aligned_cols=21  Identities=19%  Similarity=0.643  Sum_probs=11.7

Q ss_pred             eeCcchhhhccChhHHHhhhh
Q psy2103          50 YRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      |.|+.|+.....+++|+.|++
T Consensus         3 ~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhh
Confidence            455555555555555555554

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.01  E-value=0.0098  Score=25.75  Aligned_cols=23  Identities=26%  Similarity=0.372  Sum_probs=18.4

Q ss_pred             cccCCCCccCCChHHHHHHHHHh
Q psy2103          83 HHCDICDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        83 ~~C~~C~~~f~~~~~L~~H~~~~  105 (203)
                      |.|+.|-+.|..+.++..|.+.-
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            67888888888888888887654

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.74  E-value=0.0054  Score=28.42  Aligned_cols=22  Identities=41%  Similarity=0.874  Sum_probs=14.0

Q ss_pred             CCeeCcc--hhhhccChhHHHhhh
Q psy2103          48 KPYRCSI--CGSAFNQATHLKNHA   69 (203)
Q Consensus        48 ~~~~C~~--C~~~f~~~~~l~~H~   69 (203)
                      +||.|..  |.+.|++.++-..|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHH
T ss_pred             CCccccCCChhhhhcchhhhhhhc
Confidence            3566665  666666666666665

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.71  E-value=0.0053  Score=27.75  Aligned_cols=21  Identities=33%  Similarity=0.884  Sum_probs=10.3

Q ss_pred             CeeCcc--hhhhccChhHHHhhh
Q psy2103          49 PYRCSI--CGSAFNQATHLKNHA   69 (203)
Q Consensus        49 ~~~C~~--C~~~f~~~~~l~~H~   69 (203)
                      ||.|..  |+++|.+.-.|.+|.
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs   24 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHS   24 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHH
T ss_pred             CcCcccccccccchhhhhhhhhh
Confidence            444443  555555555555544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.33  E-value=0.022  Score=25.24  Aligned_cols=25  Identities=32%  Similarity=0.600  Sum_probs=22.3

Q ss_pred             ceecccccccccChhhHHHHHHHhc
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHT   45 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~   45 (203)
                      .|.|+-|+-....++.|+.|++.-+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            4899999999999999999998644

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.05  E-value=0.0044  Score=29.75  Aligned_cols=23  Identities=17%  Similarity=0.085  Sum_probs=18.9

Q ss_pred             chhhHhHHHHHHHHHHHhhccCC
Q psy2103         142 ESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       142 ~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      .-=++.|.+...|..|||.|+|+
T Consensus        11 ~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          11 SRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCcchhHHHHHHHHhhcCCC
Confidence            33345699999999999999986

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.90  E-value=0.012  Score=27.64  Aligned_cols=22  Identities=32%  Similarity=0.563  Sum_probs=18.9

Q ss_pred             ceecccccccccChhhHHHHHH
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRR   42 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~   42 (203)
                      .|.|.-||-+|.+.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4889999999999999998864

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.55  E-value=0.032  Score=28.60  Aligned_cols=28  Identities=29%  Similarity=0.558  Sum_probs=23.2

Q ss_pred             CCCCcccCCCCccCCChHHHHHHHHHhh
Q psy2103          79 GEKPHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        79 ~~~~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      .+.+..|++|+...+...+|++|++.-|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            3567889999999999999999987754

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.55  E-value=0.009  Score=27.42  Aligned_cols=27  Identities=22%  Similarity=0.352  Sum_probs=23.8

Q ss_pred             cccc--chhhHhHHHHHHHHHHHhhccCC
Q psy2103         138 EWKC--ESSRLIFEAWAKLQKELLSQSGY  164 (203)
Q Consensus       138 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~  164 (203)
                      .|.|  +.|+..|.....|..|+-.|+|+
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4667  77999999999999999999885

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.36  E-value=0.027  Score=26.32  Aligned_cols=23  Identities=26%  Similarity=0.511  Sum_probs=18.3

Q ss_pred             CCcccCCCCccCCChHHHHHHHH
Q psy2103          81 KPHHCDICDVGFSDKFALKRHRL  103 (203)
Q Consensus        81 ~~~~C~~C~~~f~~~~~L~~H~~  103 (203)
                      ..|.|+-||..|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            45888888888888888888853

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.19  E-value=0.043  Score=24.06  Aligned_cols=24  Identities=29%  Similarity=0.595  Sum_probs=18.7

Q ss_pred             cccCC--CCccCCChHHHHHHHHHhh
Q psy2103          83 HHCDI--CDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        83 ~~C~~--C~~~f~~~~~L~~H~~~~~  106 (203)
                      |.|..  |++.|....+|..|+.+|.
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            45644  8999999999998887763

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.88  E-value=0.014  Score=33.12  Aligned_cols=25  Identities=16%  Similarity=0.141  Sum_probs=23.0

Q ss_pred             CcccccchhhHhHHHHHHHHHHHhh
Q psy2103         136 LEEWKCESSRLIFEAWAKLQKELLS  160 (203)
Q Consensus       136 ~~~~~C~~C~~~f~~~~~l~~H~~~  160 (203)
                      ...|.|..|++.|.+...|..|+++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            4679999999999999999999877

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.58  E-value=0.057  Score=25.42  Aligned_cols=26  Identities=35%  Similarity=0.696  Sum_probs=18.1

Q ss_pred             ceecccccccccChhhHHHHHHHhcC
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRRIHTG   46 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~~h~~   46 (203)
                      .|.|..|+++|.....+.+|-..-.|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47777778777777777777654443

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.24  E-value=0.075  Score=24.24  Aligned_cols=28  Identities=32%  Similarity=0.680  Sum_probs=21.0

Q ss_pred             Cceeccc--ccccccChhhHHHHHHHhcCC
Q psy2103          20 RPYQCEV--CEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        20 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      +.|.|..  |+..|.....|+.|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            3467764  888888888888888888764

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.93  E-value=0.012  Score=33.29  Aligned_cols=21  Identities=38%  Similarity=0.710  Sum_probs=10.3

Q ss_pred             eeCcchhhhccChhHHHhhhh
Q psy2103          50 YRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        50 ~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      |-|..|++.|.+...|..|++
T Consensus        16 fYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTT
T ss_pred             EecccccCccCCHHHHHHHHc
Confidence            445555555555555555443

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.78  E-value=0.04  Score=24.50  Aligned_cols=18  Identities=33%  Similarity=0.624  Sum_probs=12.4

Q ss_pred             CCccCCChHHHHHHHHHh
Q psy2103          88 CDVGFSDKFALKRHRLIH  105 (203)
Q Consensus        88 C~~~f~~~~~L~~H~~~~  105 (203)
                      |.+.|+..+.++.|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            777777777777776554

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.91  E-value=0.16  Score=25.94  Aligned_cols=23  Identities=30%  Similarity=0.730  Sum_probs=11.7

Q ss_pred             CCeeCcchhhhccChhHHHhhhh
Q psy2103          48 KPYRCSICGSAFNQATHLKNHAK   70 (203)
Q Consensus        48 ~~~~C~~C~~~f~~~~~l~~H~~   70 (203)
                      .|-.|++|+.......+|++|+.
T Consensus        23 qpatcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHH
Confidence            34455555555555555555543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.68  E-value=0.041  Score=30.54  Aligned_cols=32  Identities=25%  Similarity=0.663  Sum_probs=15.0

Q ss_pred             eecccccccccChhhHHHHHHHhcCCCCeeCcchh
Q psy2103          22 YQCEVCEKTFARHSTLWNHRRIHTGEKPYRCSICG   56 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~   56 (203)
                      |.|+.|+++|.....+..   .-.....|.|..|+
T Consensus        15 y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~   46 (62)
T d1vd4a_          15 FKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCH   46 (62)
T ss_dssp             EECSSSCCEEEHHHHHHH---EETTTTEEBCSSSC
T ss_pred             eECCCCCCCcchhhHHHh---cCcCCCeEEecCCC
Confidence            566666665554433321   22222345555554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.57  E-value=0.15  Score=22.84  Aligned_cols=21  Identities=19%  Similarity=0.452  Sum_probs=13.5

Q ss_pred             eecccccccccChhhHHHHHH
Q psy2103          22 YQCEVCEKTFARHSTLWNHRR   42 (203)
Q Consensus        22 ~~C~~C~~~f~~~~~L~~H~~   42 (203)
                      |.|.-|++..++...+.-|+-
T Consensus         3 ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEe
Confidence            566666666666666666643

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=89.89  E-value=0.064  Score=26.21  Aligned_cols=26  Identities=42%  Similarity=0.805  Sum_probs=17.1

Q ss_pred             CCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCc
Q psy2103          47 EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDV   90 (203)
Q Consensus        47 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~   90 (203)
                      ++.|.|++||..                  +.++.+-+|+.|+.
T Consensus         3 ~~~~vC~vCGyi------------------~~g~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYI------------------HKGEDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCE------------------EESSCCSBCTTTCC
T ss_pred             CCEEECCCCCCE------------------eeCCCCCcCCCCCC
Confidence            345788888864                  33455677888875

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.44  E-value=0.1  Score=24.63  Aligned_cols=28  Identities=21%  Similarity=0.506  Sum_probs=19.6

Q ss_pred             CCCCcccCCCCccCCChHHHHHHHHHhh
Q psy2103          79 GEKPHHCDICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        79 ~~~~~~C~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      ++..|.|..|.+.|...+++-+|..+.|
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            4456777788888887777777755543

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.40  E-value=0.15  Score=22.67  Aligned_cols=21  Identities=24%  Similarity=0.352  Sum_probs=16.0

Q ss_pred             CCCCccCCChHHHHHHHHHhh
Q psy2103          86 DICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        86 ~~C~~~f~~~~~L~~H~~~~~  106 (203)
                      +.|++.|+++..|..|.+..|
T Consensus         6 ~gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHGG
T ss_pred             CCchhhhccHHHHHhHHHHHH
Confidence            458888888888888877654

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.24  E-value=0.21  Score=22.32  Aligned_cols=22  Identities=36%  Similarity=0.700  Sum_probs=12.0

Q ss_pred             cccCC--CCccCCChHHHHHHHHH
Q psy2103          83 HHCDI--CDVGFSDKFALKRHRLI  104 (203)
Q Consensus        83 ~~C~~--C~~~f~~~~~L~~H~~~  104 (203)
                      |.|..  |...|.++.++..|...
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHH
T ss_pred             ccccCCCcceEEeehHHHHHHHhh
Confidence            44533  66666666666665443

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.93  E-value=0.081  Score=26.01  Aligned_cols=26  Identities=38%  Similarity=0.901  Sum_probs=17.3

Q ss_pred             CCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCcc
Q psy2103          48 KPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVG   91 (203)
Q Consensus        48 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~   91 (203)
                      +.|.|.+||..+                  .++.+..|+.|+..
T Consensus         4 ~~~~C~vCG~i~------------------~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           4 KVYICPICGYTA------------------VDEAPEYCPVCGAP   29 (37)
T ss_dssp             CEEECTTTCCEE------------------ESCCCSBCTTTCCB
T ss_pred             cEEECCCCCCEe------------------cCCCCCcCCCCCCc
Confidence            357888888643                  34556778888753

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.72  E-value=0.2  Score=23.59  Aligned_cols=22  Identities=27%  Similarity=0.760  Sum_probs=10.9

Q ss_pred             ceecccccccccChhhHHHHHH
Q psy2103          21 PYQCEVCEKTFARHSTLWNHRR   42 (203)
Q Consensus        21 ~~~C~~C~~~f~~~~~L~~H~~   42 (203)
                      .|.|.+|.+.+.-.+++-+|..
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyv   29 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYV   29 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHHHH
Confidence            3455555555555555555443

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.39  E-value=0.081  Score=29.27  Aligned_cols=37  Identities=16%  Similarity=0.518  Sum_probs=26.2

Q ss_pred             CCCeeCcchhhhccChhHHHhhhhcCCccccCCCCCcccCCCCcc
Q psy2103          47 EKPYRCSICGSAFNQATHLKNHAKVGKCKVHTGEKPHHCDICDVG   91 (203)
Q Consensus        47 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~C~~C~~~   91 (203)
                      ...|+|+.|++.|+....+.- +       -.....|.|..|+-.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L-~-------d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL-F-------DPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH-E-------ETTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh-c-------CcCCCeEEecCCCCE
Confidence            346999999999887776654 2       334456899988754

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.05  E-value=1.1  Score=24.42  Aligned_cols=32  Identities=22%  Similarity=0.385  Sum_probs=27.3

Q ss_pred             CCCCcccCCCCccCCChHHHHHHHHHhhhhhc
Q psy2103          79 GEKPHHCDICDVGFSDKFALKRHRLIHEKYAR  110 (203)
Q Consensus        79 ~~~~~~C~~C~~~f~~~~~L~~H~~~~~~~~~  110 (203)
                      +...|.|..|...|-+-..|..|+..|...-.
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hneefq   46 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ   46 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhccHHHH
Confidence            45679999999999999999999999875543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.36  E-value=0.2  Score=27.48  Aligned_cols=28  Identities=32%  Similarity=0.674  Sum_probs=24.5

Q ss_pred             CceecccccccccChhhHHHHHHHhcCC
Q psy2103          20 RPYQCEVCEKTFARHSTLWNHRRIHTGE   47 (203)
Q Consensus        20 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~   47 (203)
                      ..|.|.-|...|.+...|..|+..|..+
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hnee   44 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHNEE   44 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhccHH
Confidence            4599999999999999999999888643

>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Clostridium pasteurianum [TaxId: 1501]

Probab=85.53  E-value=0.2  Score=26.70  Aligned_cols=13  Identities=38%  Similarity=1.224  Sum_probs=7.0

Q ss_pred             eeCcchhhhccCh
Q psy2103          50 YRCSICGSAFNQA   62 (203)
Q Consensus        50 ~~C~~C~~~f~~~   62 (203)
                      |+|..|++.|...
T Consensus         4 y~C~~CgyiYd~~   16 (53)
T d1iroa_           4 YTCTVCGYIYNPE   16 (53)
T ss_dssp             EEETTTCCEECTT
T ss_pred             eEcCCCCcEECcc
Confidence            5555555555433

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.62  E-value=0.45  Score=22.41  Aligned_cols=24  Identities=29%  Similarity=0.595  Sum_probs=20.5

Q ss_pred             CCceecccccccccChhhHHHHHH
Q psy2103          19 ERPYQCEVCEKTFARHSTLWNHRR   42 (203)
Q Consensus        19 ~~~~~C~~C~~~f~~~~~L~~H~~   42 (203)
                      .+.|.|..|-+-.++...|.+|+.
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~   28 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMK   28 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHH
Confidence            356899999999999999999975

>d1brfa_ g.41.5.1 (A:) Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.93  E-value=0.2  Score=26.66  Aligned_cols=12  Identities=33%  Similarity=1.168  Sum_probs=6.4

Q ss_pred             eeCcchhhhccC
Q psy2103          50 YRCSICGSAFNQ   61 (203)
Q Consensus        50 ~~C~~C~~~f~~   61 (203)
                      |+|..|++.|..
T Consensus         3 y~C~~CgyiYd~   14 (53)
T d1brfa_           3 WVCKICGYIYDE   14 (53)
T ss_dssp             EEETTTCCEEET
T ss_pred             eECCCCCcEECc
Confidence            555555555543

>d1s24a_ g.41.5.1 (A:) Two-iron rubredoxin {Pseudomonas oleovorans [TaxId: 301]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Two-iron rubredoxin
species: Pseudomonas oleovorans [TaxId: 301]

Probab=83.26  E-value=0.17  Score=27.23  Aligned_cols=13  Identities=23%  Similarity=0.930  Sum_probs=7.4

Q ss_pred             CeeCcchhhhccC
Q psy2103          49 PYRCSICGSAFNQ   61 (203)
Q Consensus        49 ~~~C~~C~~~f~~   61 (203)
                      .|+|..|++.+..
T Consensus         4 ky~C~~CgyiYdp   16 (56)
T d1s24a_           4 KWICITCGHIYDE   16 (56)
T ss_dssp             EEEETTTTEEEET
T ss_pred             cEECCCCCcEECc
Confidence            4566666665543

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.07  E-value=0.67  Score=21.37  Aligned_cols=20  Identities=20%  Similarity=0.220  Sum_probs=16.4

Q ss_pred             CCCccCCChHHHHHHHHHhh
Q psy2103          87 ICDVGFSDKFALKRHRLIHE  106 (203)
Q Consensus        87 ~C~~~f~~~~~L~~H~~~~~  106 (203)
                      .|+..|.++..|..|+...|
T Consensus         8 ~C~~eFdtQd~LV~HinndH   27 (32)
T d2glia1           8 GCSQEFDSQEQLVHHINSEH   27 (32)
T ss_dssp             TCCCBCSCHHHHHHHHHHHT
T ss_pred             ccccccCCHHHHHHHccccc
Confidence            38899999999999987654

>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio gigas [TaxId: 879]

Probab=80.62  E-value=0.35  Score=25.55  Aligned_cols=13  Identities=38%  Similarity=1.219  Sum_probs=6.8

Q ss_pred             eeCcchhhhccCh
Q psy2103          50 YRCSICGSAFNQA   62 (203)
Q Consensus        50 ~~C~~C~~~f~~~   62 (203)
                      |+|..|++.|...
T Consensus         4 y~C~~CgyiYdp~   16 (52)
T d2dsxa1           4 YVCTVCGYEYDPA   16 (52)
T ss_dssp             EEETTTCCEECTT
T ss_pred             EEeCCCCeEECcc
Confidence            5555555555433