Psyllid ID: psy2275

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-----
MKFVRRAFAGRKNELAGRGLDKPDLSHLSPVKPDEVVNLEAPDFFRSFEPLLKATPKRVLANYLLWQVMSFSSTYLTEEMNNRYFKFSSTLRGVTARKPRWQECVDETKDLDIAVGALYIRKYFNQDAKANVETMVRLILDETYKYLSTVDWMDPNTRLAAQDKVKAIIPYVAYPQELLGEYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPPDAGTQTSRHPLHQDLHYFPHRPAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEGGVNAMYHGIRGFDSHDKLNLYMERGDTVFFHPLLIHGSGTNVTKAVLGTSQRSAGRTQRLANPVVKAYLEYMVDIAVMMGASRETAQQELTASLQFESRLRNITKSNEEYRKMSKLSNLVTISHLEHKYPILGTSFSNDRPSYMNFGSMGWTIGHEITHGFDSTGSRFDKNGTEINWWDPSTREKYKILWLLHLPWAANRPEEPRLPGLQRFSPRQMFWVSAATSYCGLQRPEDLKDNLLNDEHTPPEWRAVGSLANSVEFGRDFGTGSRFDKNGTEFNWWDPSTREKYKVKSKCMVDQYGKYVVPEVNGSVNGVNTLVGLAIAIAIASS
cccccccHHHHHHHHccccccHHHHHcccccccccEEEEcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccHHHHHHHHHHcHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHccccccccccEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHcccHHHHHHHcccccccccccEEEEEcccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEcccccc
ccccHHHHHHHHHHHccccccHHHHHHcccccccccEEEEcHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccccHHHHHHHccccHHHHHHHHHHHHHccHccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHcccHHHHHHHHHHccccHHHHHHcccHHHHHHHHHccHHHHHHHHHHHcccccccccccccccEEEEEEccccccccccccccccccccHcccEEEEEEccccccccccccccccccccccHHHHccccccccccEEEEEEccccEEEEEEEEccccccccEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccccccccccccccccccEEcccccccccccccccccccccccccccEEEEEccEEcccccccccccccccccHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEHHHHHHccccHHHHHHHccccccccccEEEEEccccHHHHHHHcccccEEcccccccccccHHHHHHHHHHHHHHHHHHcccccccEccccccHHHHHHHHHHHHHHcc
MKFVRRAFAgrknelagrgldkpdlshlspvkpdevvnleapdffrsfepllkatpKRVLANYLLWQVMSFSSTYLteemnnryfkfsstlrgvtarkprwqecvdeTKDLDIAVGALYIRKYFNQDAKANVETMVRLILDETYKYLstvdwmdpntrlaAQDKVKAIIPYVAYPQELLGEYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLinkppdagtqtsrhplhqdlhyfphrpahRIVAAWTAMEridkdngclfvlprthrdpgsllqheypeweggvnamyhgirgfdshdklnlymergdtvffhpllihgsgtnvtKAVLgtsqrsagrtqrLANPVVKAYLEYMVDIAVMMGASRETAQQELTASLQFESRLRNITKSNEEYRKMSKlsnlvtishlehkypilgtsfsndrpsymnfgsmgwtigheithgfdstgsrfdkngteinwwdpstrEKYKILWLLHlpwaanrpeeprlpglqrfsprqmFWVSAATsycglqrpedlkdnllndehtppewravgslansvefgrdfgtgsrfdkngtefnwwdpstrekykvkskcmvdqygkyvvpevngsvngVNTLVGLAIAIAIASS
mkfvrrafagrknelagrgldkpdlshlspvkPDEVVNLEAPDFFRSFEPLLKATPKRVLANYLLWQVMSFSSTYLTEEMNNRYFKFsstlrgvtarkprwqecvdetkdlDIAVGALYIRKYFNQDAKANVETMVRLILDETYKYLSTVDWMDPNTRLAAQDKVKAIIPYVAYPQELLGEYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPPDAGTQTSRHPLHQDLHYFPHRPAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEGGVNAMYHGIRGFDSHDKLNLYMERGDTVFFHPLLIHGSGTNVTKAVLgtsqrsagrtqrlanPVVKAYLEYMVDIAVMMGASRETAQQELTaslqfesrLRNITKSNEEYRKMSKLSNLVTISHLEHKYPILGTSFSNDRPSYMNFGSMGWTIGHEITHGFDSTGSRFDKNGTEINWWDPSTREKYKILWLLHLPWAANRPEEPRLPGLQRFSPRQMFWVSAATSYCGLQRPEDLKDNLLNDEHTPPEWRAVGSLANSVEFGRdfgtgsrfdkngtefnwwdpstrekykVKSKCMVDQYGKYVVPEVNGSVNGVNTLVGLAIAIAIASS
MKFVRRAFAGRKNELAGRGLDKPDLSHLSPVKPDEVVNLEAPDFFRSFEPLLKATPKRVLANYLLWQVMSFSSTYLTEEMNNRYFKFSSTLRGVTARKPRWQECVDETKDLDIAVGALYIRKYFNQDAKANVETMVRLILDETYKYLSTVDWMDPNTRLAAQDKVKAIIPYVAYPQELLGEYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPPDAGTQTSRHPLHQDLHYFPHRPAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEGGVNAMYHGIRGFDSHDKLNLYMERGDTVFFHPLLIHGSGTNVTKAVLGTSQRSAGRTQRLANPVVKAYLEYMVDIAVMMGASRETAQQELTASLQFESRLRNITKSNEEYRKMSKLSNLVTISHLEHKYPILGTSFSNDRPSYMNFGSMGWTIGHEITHGFDSTGSRFDKNGTEINWWDPSTREKYKILWLLHLPWAANRPEEPRLPGLQRFSPRQMFWVSAATSYCGLQRPEDLKDNLLNDEHTPPEWRAVGSLANSVEFGRDFGTGSRFDKNGTEFNWWDPSTREKYKVKSKCMVDQYGKYVVPEVNGSVNGVNTLVGLAIAIAIASS
***********************************VVNLEAPDFFRSFEPLLKATPKRVLANYLLWQVMSFSSTYLTEEMNNRYFKFSSTLRGVTARKPRWQECVDETKDLDIAVGALYIRKYFNQDAKANVETMVRLILDETYKYLSTVDWMDPNTRLAAQDKVKAIIPYVAYPQELLGEYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLIN*************LHQDLHYFPHRPAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEGGVNAMYHGIRGFDSHDKLNLYMERGDTVFFHPLLIHGSGTNVTKAVLGT*******TQRLANPVVKAYLEYMVDIAVMMGA**********************************LSNLVTISHLEHKYPILGTSFSNDRPSYMNFGSMGWTIGHEITHGFDSTGSRFDKNGTEINWWDPSTREKYKILWLLHLPWAAN*********LQRFSPRQMFWVSAATSYCGLQR****************EWRAVGSLANSVEFGRDFGTGSRFDKNGTEFNWWDPSTREKYKVKSKCMVDQYGKYVVPEVNGSVNGVNTLVGLAIAIAI***
*KFVRRAFAGRKNELAGRGLDKPDLSHLSPVKPDEVVNLEAPDFFRSFEPLLKATPKRVLANYLLWQVMSFSSTYLTEEMNNRYFKFSSTLRGVTARKPRWQECVDETKDLDIAVGALYIRKYFNQDAKANVETMVRLILDETYKYLSTVDWMDPNTRLAAQDKVKAIIPYVAYPQELLGEYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPPDAGTQTSRHPLHQDLHYFPHRPAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEGGVNAMYHGIRGFDSHDKLNLYMERGDTVFFHPLLIHGSGTNVTKAVLGTSQRSAGRTQRLANPVVKAYLEYMVDIAVMMGASRETAQQELTASLQFESRLRNITKSNEEYRKMSKLSNLVTISHLEHKYPILGTSFSNDRPSYMNFGSMGWTIGHEITHGFDSTGSRFDKNGTEINWWDPSTREKYKILWLLHLPWAANRPEEPRLPGLQRFSPRQMFWVSAATSYCGLQRPEDLKDNLLNDEHTPPEWRAVGSLANSVEFGRDFGTGSR*DKNGTEFNWWDPSTREKYKVKSKCMVDQYGKYVVPEVNGSVNGVNTLVGLAIAIA****
MKFVRRAFAGRKNELAGRGLDKPDLSHLSPVKPDEVVNLEAPDFFRSFEPLLKATPKRVLANYLLWQVMSFSSTYLTEEMNNRYFKFSSTLRGVTARKPRWQECVDETKDLDIAVGALYIRKYFNQDAKANVETMVRLILDETYKYLSTVDWMDPNTRLAAQDKVKAIIPYVAYPQELLGEYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPP********HPLHQDLHYFPHRPAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEGGVNAMYHGIRGFDSHDKLNLYMERGDTVFFHPLLIHGSGTNVTKAVLGTSQRSAGRTQRLANPVVKAYLEYMVDIAVMMGASRETAQQELTASLQFESRLRNITKSNEEYRKMSKLSNLVTISHLEHKYPILGTSFSNDRPSYMNFGSMGWTIGHEITHGFDSTGSRFDKNGTEINWWDPSTREKYKILWLLHLPWAANRPEEPRLPGLQRFSPRQMFWVSAATSYCGLQRPEDLKDNLLNDEHTPPEWRAVGSLANSVEFGRDFGTGSRFDKNGTEFNWWDPSTREKYKVKSKCMVDQYGKYVVPEVNGSVNGVNTLVGLAIAIAIASS
MKFVRRAFAGRKNELAGRGLDKPDLSHLSPVKPDEVVNLEAPDFFRSFEPLLKATPKRVLANYLLWQVMSFSSTYLTEEMNNRYFKFSSTLRGVTARKPRWQECVDETKDLDIAVGALYIRKYFNQDAKANVETMVRLILDETYKYLSTVDWMDPNTRLAAQDKVKAIIPYVAYPQELLGEYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPPDAGTQTSRHPLHQDLHYFPHRPAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEGGVNAMYHGIRGFDSHDKLNLYMERGDTVFFHPLLIHGSGTNVTKAVLGTSQRSAGRTQRLANPVVKAYLEYMVDIAVMMGASRETAQQELTASLQFESRLRNITKSNEEYRKMSKLSNLVTISHLEHKYPILGTSFSNDRPSYMNFGSMGWTIGHEITHGFDSTGSRFDKNGTEINWWDPSTREKYKILWLLHLPWAANRPEEPRLPGLQRFSPRQMFWVSAATSYCGLQRPEDLKDNLLNDEHTPPEWRAVGSLANSVEFGRDFGTGSRFDKNGTEFNWWDPSTREKYKVKSKCMVDQYGKYVVPEVNGSVNGVNTLVGLAIAIAIASS
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MKFVRRAFAGRKNELAGRGLDKPDLSHLSPVKPDEVVNLEAPDFFRSFEPLLKATPKRVLANYLLWQVMSFSSTYLTEEMNNRYFKFSSTLRGVTARKPRWQECVDETKDLDIAVGALYIRKYFNQDAKANVETMVRLILDETYKYLSTVDWMDPNTRLAAQDKVKAIIPYVAYPQELLGEYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPPDAGTQTSRHPLHQDLHYFPHRPAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEGGVNAMYHGIRGFDSHDKLNLYMERGDTVFFHPLLIHGSGTNVTKAVLGTSQRSAGRTQRLANPVVKAYLEYMVDIAVMMGASRETAQQELTASLQFESRLRNITKSNEEYRKMSKLSNLVTISHLEHKYPILGTSFSNDRPSYMNFGSMGWTIGHEITHGFDSTGSRFDKNGTEINWWDPSTREKYKILWLLHLPWAANRPEEPRLPGLQRFSPRQMFWVSAATSYCGLQRPEDLKDNLLNDEHTPPEWRAVGSLANSVEFGRDFGTGSRFDKNGTEFNWWDPSTREKYKVKSKCMVDQYGKYVVPEVNGSVNGVNTLVGLAIAIAIASS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query625 2.2.26 [Sep-21-2011]
O18778337 Phytanoyl-CoA dioxygenase yes N/A 0.324 0.602 0.481 6e-54
O35386338 Phytanoyl-CoA dioxygenase yes N/A 0.249 0.461 0.603 1e-53
O14832338 Phytanoyl-CoA dioxygenase yes N/A 0.252 0.467 0.590 5e-52
P57093338 Phytanoyl-CoA dioxygenase yes N/A 0.252 0.467 0.583 6e-52
O62515312 Probable phytanoyl-CoA di yes N/A 0.254 0.509 0.545 5e-46
O16796848 Neprilysin-2 OS=Caenorhab no N/A 0.203 0.149 0.313 2e-18
Q9JLI3765 Membrane metallo-endopept no N/A 0.2 0.163 0.316 6e-18
Q495T6779 Membrane metallo-endopept no N/A 0.206 0.165 0.317 2e-17
P70669749 Metalloendopeptidase homo no N/A 0.251 0.209 0.284 1e-16
P0C1T0774 Membrane metallo-endopept no N/A 0.2 0.161 0.310 1e-16
>sp|O18778|PAHX_BOVIN Phytanoyl-CoA dioxygenase, peroxisomal OS=Bos taurus GN=PHYH PE=2 SV=2 Back     alignment and function desciption
 Score =  212 bits (540), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 106/220 (48%), Positives = 149/220 (67%), Gaps = 17/220 (7%)

Query: 181 EYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPPDAGTQTSRHPL 240
           E + +KVQ+   DE   +Y    ++L YVE F GP+I A+H+MLINKPPD+G +TSRHPL
Sbjct: 115 EKVVSKVQDFQEDEELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPL 174

Query: 241 HQDLHYFPHRPAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEGGVNAM 300
           HQDLHYFP RP++ IV AWTAME ID++NGCL VLP TH+ P  L  H+YP+WEGGVN M
Sbjct: 175 HQDLHYFPFRPSNSIVCAWTAMEHIDRNNGCLVVLPGTHKGP--LQPHDYPQWEGGVNIM 232

Query: 301 YHGIRGFDSHD-KLNLYMERGDTVFFHPLLIHGSGTNVTKAVLGTSQRSAGRTQRLANPV 359
           +HGI+ +D ++ +++L ME+GDTVFFHPLLIHGSG N          +S G  + ++   
Sbjct: 233 FHGIQDYDKNNARVHLVMEKGDTVFFHPLLIHGSGRN----------KSQGFRKAISCHF 282

Query: 360 VKAYLEYMVDIAVMMGASRETAQQELTASLQFESRLRNIT 399
             A   Y +D+    G S+E  ++E+   ++ +   +++T
Sbjct: 283 ADANCHY-IDVE---GTSQENIEKEVVDIVRKKYGFKDVT 318
Converts phytanoyl-CoA to 2-hydroxyphytanoyl-CoA.
Bos taurus (taxid: 9913)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 8
>sp|O35386|PAHX_MOUSE Phytanoyl-CoA dioxygenase, peroxisomal OS=Mus musculus GN=Phyh PE=1 SV=1 Back     alignment and function description
>sp|O14832|PAHX_HUMAN Phytanoyl-CoA dioxygenase, peroxisomal OS=Homo sapiens GN=PHYH PE=1 SV=1 Back     alignment and function description
>sp|P57093|PAHX_RAT Phytanoyl-CoA dioxygenase, peroxisomal OS=Rattus norvegicus GN=Phyh PE=1 SV=2 Back     alignment and function description
>sp|O62515|PAHX_CAEEL Probable phytanoyl-CoA dioxygenase OS=Caenorhabditis elegans GN=ZK550.6 PE=3 SV=2 Back     alignment and function description
>sp|O16796|NEPL2_CAEEL Neprilysin-2 OS=Caenorhabditis elegans GN=nep-2 PE=1 SV=2 Back     alignment and function description
>sp|Q9JLI3|MMEL1_MOUSE Membrane metallo-endopeptidase-like 1 OS=Mus musculus GN=Mmel1 PE=1 SV=1 Back     alignment and function description
>sp|Q495T6|MMEL1_HUMAN Membrane metallo-endopeptidase-like 1 OS=Homo sapiens GN=MMEL1 PE=1 SV=2 Back     alignment and function description
>sp|P70669|PHEX_MOUSE Metalloendopeptidase homolog PEX OS=Mus musculus GN=Phex PE=2 SV=1 Back     alignment and function description
>sp|P0C1T0|MMEL1_RAT Membrane metallo-endopeptidase-like 1 OS=Rattus norvegicus GN=Mmel1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query625
321462018319 hypothetical protein DAPPUDRAFT_188919 [ 0.254 0.498 0.677 1e-60
321471628302 hypothetical protein DAPPUDRAFT_316382 [ 0.256 0.529 0.641 5e-58
193641036304 PREDICTED: phytanoyl-CoA dioxygenase, pe 0.254 0.523 0.647 1e-57
198437744329 PREDICTED: similar to phytanoyl-CoA hydr 0.388 0.738 0.440 2e-54
327273465395 PREDICTED: phytanoyl-CoA dioxygenase, pe 0.246 0.389 0.624 9e-54
391345429334 PREDICTED: phytanoyl-CoA dioxygenase, pe 0.329 0.616 0.486 1e-53
301611538334 PREDICTED: phytanoyl-CoA dioxygenase, pe 0.318 0.595 0.509 1e-53
344277989334 PREDICTED: phytanoyl-CoA dioxygenase, pe 0.267 0.5 0.582 3e-53
62955619335 phytanoyl-CoA dioxygenase, peroxisomal [ 0.267 0.498 0.582 4e-53
326666485335 PREDICTED: phytanoyl-CoA dioxygenase, pe 0.267 0.498 0.582 4e-53
>gi|321462018|gb|EFX73045.1| hypothetical protein DAPPUDRAFT_188919 [Daphnia pulex] Back     alignment and taxonomy information
 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/161 (67%), Positives = 129/161 (80%), Gaps = 2/161 (1%)

Query: 180 GEYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPPDAGTQTSRHP 239
           GE LYNK Q+ VYDEV  ++ +  ++LD+VE F GP+IRA+H+MLINKPPD G+QTSRHP
Sbjct: 97  GERLYNKAQDFVYDEVLFQFCLLPQILDHVECFTGPNIRAMHTMLINKPPDTGSQTSRHP 156

Query: 240 LHQDLHYFPHRPAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEGGVNA 299
           LHQDLHYFP RPA RIV AWTAMERI  DNGCL VLP TH+  G L QH+YP+WE GVN 
Sbjct: 157 LHQDLHYFPFRPADRIVCAWTAMERITPDNGCLIVLPGTHK--GVLHQHDYPDWEKGVNK 214

Query: 300 MYHGIRGFDSHDKLNLYMERGDTVFFHPLLIHGSGTNVTKA 340
           MYHG+RG+D+H  + L ME+GDTVFFHP+LIHGSG N T  
Sbjct: 215 MYHGVRGYDNHPMVELPMEKGDTVFFHPILIHGSGMNRTNG 255

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|321471628|gb|EFX82600.1| hypothetical protein DAPPUDRAFT_316382 [Daphnia pulex] Back     alignment and taxonomy information
>gi|193641036|ref|XP_001948702.1| PREDICTED: phytanoyl-CoA dioxygenase, peroxisomal-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|198437744|ref|XP_002125844.1| PREDICTED: similar to phytanoyl-CoA hydroxylase (Refsum disease) [Ciona intestinalis] Back     alignment and taxonomy information
>gi|327273465|ref|XP_003221501.1| PREDICTED: phytanoyl-CoA dioxygenase, peroxisomal-like [Anolis carolinensis] Back     alignment and taxonomy information
>gi|391345429|ref|XP_003746989.1| PREDICTED: phytanoyl-CoA dioxygenase, peroxisomal-like [Metaseiulus occidentalis] Back     alignment and taxonomy information
>gi|301611538|ref|XP_002935288.1| PREDICTED: phytanoyl-CoA dioxygenase, peroxisomal [Xenopus (Silurana) tropicalis] Back     alignment and taxonomy information
>gi|344277989|ref|XP_003410779.1| PREDICTED: phytanoyl-CoA dioxygenase, peroxisomal-like [Loxodonta africana] Back     alignment and taxonomy information
>gi|62955619|ref|NP_001017823.1| phytanoyl-CoA dioxygenase, peroxisomal [Danio rerio] gi|62204330|gb|AAH92793.1| Phytanoyl-CoA 2-hydroxylase [Danio rerio] gi|182888908|gb|AAI64367.1| Phyh protein [Danio rerio] Back     alignment and taxonomy information
>gi|326666485|ref|XP_003198284.1| PREDICTED: phytanoyl-CoA dioxygenase, peroxisomal-like [Danio rerio] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query625
ZFIN|ZDB-GENE-050417-361335 phyh "phytanoyl-CoA 2-hydroxyl 0.264 0.492 0.589 6.3e-53
FB|FBgn0027570763 Nep2 "Neprilysin 2" [Drosophil 0.268 0.220 0.390 2.7e-52
MGI|MGI:891978338 Phyh "phytanoyl-CoA hydroxylas 0.248 0.458 0.607 1.5e-51
UNIPROTKB|O18778337 PHYH "Phytanoyl-CoA dioxygenas 0.246 0.456 0.611 4e-51
UNIPROTKB|C9IYS5176 PHYH "Phytanoyl-CoA dioxygenas 0.251 0.892 0.593 7.4e-50
UNIPROTKB|O14832338 PHYH "Phytanoyl-CoA dioxygenas 0.251 0.464 0.593 7.4e-50
RGD|620317338 Phyh "phytanoyl-CoA 2-hydroxyl 0.251 0.464 0.587 7.4e-50
UNIPROTKB|I3LNY4237 PHYH "Uncharacterized protein" 0.251 0.662 0.581 3.2e-49
UNIPROTKB|F1N834307 PHYH "Uncharacterized protein" 0.249 0.508 0.572 2.7e-45
UNIPROTKB|B4E334452 PHEX "cDNA FLJ51465, highly si 0.256 0.353 0.277 9.2e-34
ZFIN|ZDB-GENE-050417-361 phyh "phytanoyl-CoA 2-hydroxylase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 99/168 (58%), Positives = 128/168 (76%)

Query:   172 VAYPQELLGEYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPPDA 231
             +A  + + GE    K+Q+   D    +Y +  ++L YVE F GP+I A+H+MLINKPPD 
Sbjct:   103 IAKSEFVEGEKAVTKLQDYQEDPELFRYCVLPQILKYVECFTGPNIMAMHTMLINKPPDT 162

Query:   232 GTQTSRHPLHQDLHYFPHRPAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYP 291
             G +TSRHP+HQDLHYFP RPA RIV +WTAME++ ++NGCL VLP +HR  GSL +H+YP
Sbjct:   163 GKKTSRHPMHQDLHYFPFRPADRIVCSWTAMEKVHRENGCLVVLPGSHR--GSLQEHDYP 220

Query:   292 EWEGGVNAMYHGIRGFD-SHDKLNLYMERGDTVFFHPLLIHGSGTNVT 338
             EWEGGVN MYHG+R +D +H +++L ME+GDTVFFHPLLIHGSG N T
Sbjct:   221 EWEGGVNKMYHGVRNYDPNHPRVHLEMEKGDTVFFHPLLIHGSGMNQT 268
GO:0008150 "biological_process" evidence=ND
GO:0003674 "molecular_function" evidence=ND
GO:0005575 "cellular_component" evidence=ND
FB|FBgn0027570 Nep2 "Neprilysin 2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:891978 Phyh "phytanoyl-CoA hydroxylase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|O18778 PHYH "Phytanoyl-CoA dioxygenase, peroxisomal" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|C9IYS5 PHYH "Phytanoyl-CoA dioxygenase, peroxisomal" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O14832 PHYH "Phytanoyl-CoA dioxygenase, peroxisomal" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|620317 Phyh "phytanoyl-CoA 2-hydroxylase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|I3LNY4 PHYH "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1N834 PHYH "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|B4E334 PHEX "cDNA FLJ51465, highly similar to Phosphate-regulating neutral endopeptidase (EC 3.4.24.-)" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O14832PAHX_HUMAN1, ., 1, 4, ., 1, 1, ., 1, 80.59000.25280.4674yesN/A
P57093PAHX_RAT1, ., 1, 4, ., 1, 1, ., 1, 80.58380.25280.4674yesN/A
O35386PAHX_MOUSE1, ., 1, 4, ., 1, 1, ., 1, 80.60370.24960.4615yesN/A
O62515PAHX_CAEEL1, ., 1, 4, ., 1, 1, ., 1, 80.54540.25440.5096yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!
3rd Layer3.4.24LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query625
cd08662611 cd08662, M13, Peptidase family M13 includes nepril 3e-41
pfam05649380 pfam05649, Peptidase_M13_N, Peptidase family M13 7e-39
cd08662611 cd08662, M13, Peptidase family M13 includes nepril 1e-35
pfam05721213 pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH) 8e-28
COG3590654 COG3590, PepO, Predicted metalloendopeptidase [Pos 7e-21
pfam01431206 pfam01431, Peptidase_M13, Peptidase family M13 2e-20
COG3590654 COG3590, PepO, Predicted metalloendopeptidase [Pos 5e-14
cd08662611 cd08662, M13, Peptidase family M13 includes nepril 8e-14
COG5285299 COG5285, COG5285, Protein involved in biosynthesis 3e-11
cd08662 611 cd08662, M13, Peptidase family M13 includes nepril 9e-09
pfam05649380 pfam05649, Peptidase_M13_N, Peptidase family M13 1e-08
pfam01431206 pfam01431, Peptidase_M13, Peptidase family M13 1e-04
COG3590654 COG3590, PepO, Predicted metalloendopeptidase [Pos 5e-04
>gnl|CDD|189000 cd08662, M13, Peptidase family M13 includes neprilysin, endothelin-converting enzyme I Back     alignment and domain information 
 Score =  158 bits (401), Expect = 3e-41
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 4/171 (2%)

Query: 25  LSHLSPVKPDEVVNLEAPDFFRSFEPLLKATPKRVLANYLLWQVMSFSSTYLTEEMNNRY 84
           L  L     DE V +  PD+ +    LL +TP R L NYL+W+++   + YL+EE  +  
Sbjct: 202 LEALGLPSEDEKVIVTQPDYLKKLNKLLASTPLRTLKNYLIWRLLDSLAPYLSEEFRDAN 261

Query: 85  FKFSSTLRGVTARKPRWQECVDETKD-LDIAVGALYIRKYFNQDAKANVETMVRLILDET 143
           F +  TL G   ++PRW+ CV      L  A+G LY+RKYF  +AKA VE +V  +    
Sbjct: 262 FFYGKTLSGTKEQRPRWKRCVSLVNGLLGEALGRLYVRKYFPPEAKARVEELVENLKKAF 321

Query: 144 YKYLSTVDWMDPNTRLAAQDKVKAIIPYVAYPQELLGEYLYNKVQELVYDE 194
            + L  +DWMD  T+  A +K+ A+   + YP +      Y+K+     D 
Sbjct: 322 RERLENLDWMDEETKKKALEKLDAMTVKIGYPDKWR---DYSKLDIDYDDL 369

M13 family of metallopeptidases includes neprilysin (neutral endopeptidase, NEP, enkephalinase, CD10, CALLA, EC 3.4.24.11), endothelin-converting enzyme I (ECE-1, EC 3.4.24.71), erythrocyte surface antigen KELL (ECE-3), phosphate-regulating gene on the X chromosome (PHEX), soluble secreted endopeptidase (SEP), and damage-induced neuronal endopeptidase (DINE)/X-converting enzyme (XCE). These proteins consist of a short N-terminal cytoplasmic domain, a single transmembrane helix, and a larger C-terminal extracellular domain containing the active site. Proteins in this family fulfill a broad range of physiological roles due to the greater variation in the S2' subsite allowing substrate specificity. NEP is expressed in a variety of tissues including kidney and brain, and is involved in many physiological and pathological processes, including blood pressure and inflammatory response. It degrades a wide array of substrates such as substance P, enkephalins, cholecystokinin, neurotensin and somatostatin. It is an important enzyme in the regulation of amyloid-beta (Abeta) protein that forms amyloid plaques that are associated with Alzeimers disease (AD). ECE-1 catalyzes the final rate-limiting step in the biosynthesis of endothelins via post-translational conversion of the biologically inactive big endothelins. Like NEP, it also hydrolyses bradykinin, substance P, neurotensin and Abeta. Endothelin-1 overproduction has been implicated in various diseases, including stroke, asthma, hypertension, and cardiac and renal failure. Kell is a homolog of NEP and constitutes a major antigen on human erythrocytes; it preferentially cleaves big endothelin-3 to produce bioactive endothelin-3, but is also known to cleave substance P and neurokinin A. PHEX forms a complex interaction with fibroblast growth factor 23 (FGF23) and matrix extracellular phosphoglycoprotein, causing bone mineralization. A loss-of-function mutation in PHEX disrupts this interaction leading to hypophosphatemic rickets; X-linked hypophosphatemic (XLH) rickets is the most common form of metabolic rickets. ECEL1 is a brain metalloprotease involved in the critical role in the nervous regulation of the respiratory system, while DINE (damage induced neuronal endopeptidase) is abundantly expressed in the hypothalamus and its expression responds to nerve injury as well. Thus, majority of these M13 proteases are prime therapeutic targets for selective inhibition. Length = 611
>gnl|CDD|218676 pfam05649, Peptidase_M13_N, Peptidase family M13 Back     alignment and domain information
>gnl|CDD|189000 cd08662, M13, Peptidase family M13 includes neprilysin, endothelin-converting enzyme I Back     alignment and domain information
>gnl|CDD|218716 pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH) Back     alignment and domain information
>gnl|CDD|226118 COG3590, PepO, Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|216499 pfam01431, Peptidase_M13, Peptidase family M13 Back     alignment and domain information
>gnl|CDD|226118 COG3590, PepO, Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|189000 cd08662, M13, Peptidase family M13 includes neprilysin, endothelin-converting enzyme I Back     alignment and domain information
>gnl|CDD|227609 COG5285, COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|189000 cd08662, M13, Peptidase family M13 includes neprilysin, endothelin-converting enzyme I Back     alignment and domain information
>gnl|CDD|218676 pfam05649, Peptidase_M13_N, Peptidase family M13 Back     alignment and domain information
>gnl|CDD|216499 pfam01431, Peptidase_M13, Peptidase family M13 Back     alignment and domain information
>gnl|CDD|226118 COG3590, PepO, Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 625
COG3590654 PepO Predicted metalloendopeptidase [Posttranslati 100.0
KOG3624|consensus687 100.0
COG3590654 PepO Predicted metalloendopeptidase [Posttranslati 100.0
TIGR01762288 chlorin-enz chlorinating enzymes. This model repre 99.94
TIGR02408277 ectoine_ThpD ectoine hydroxylase. Both ectoine and 99.94
KOG3624|consensus687 99.93
KOG3290|consensus286 99.91
PF05649390 Peptidase_M13_N: Peptidase family M13 This is fami 99.89
PF01431206 Peptidase_M13: Peptidase family M13 This is family 99.88
PF05721211 PhyH: Phytanoyl-CoA dioxygenase (PhyH); InterPro: 99.88
COG5285299 Protein involved in biosynthesis of mitomycin anti 99.8
PF01431206 Peptidase_M13: Peptidase family M13 This is family 99.43
PF05649390 Peptidase_M13_N: Peptidase family M13 This is fami 98.89
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.55
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.02
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 93.43
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 93.41
PF07350416 DUF1479: Protein of unknown function (DUF1479); In 91.64
TIGR02466201 conserved hypothetical protein. This family consis 88.1
PLN00052310 prolyl 4-hydroxylase; Provisional 86.05
>COG3590 PepO Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=4.5e-50  Score=415.15  Aligned_cols=363  Identities=27%  Similarity=0.445  Sum_probs=286.8

Q ss_pred             cCCCCccCcccccCCCCCCeEEEcCchhHHHHHHHHhcCChHHHHHHHHHHHHHHhhhhccHHHHHHHHH-hhhhccCcc
Q psy2275          17 GRGLDKPDLSHLSPVKPDEVVNLEAPDFFRSFEPLLKATPKRVLANYLLWQVMSFSSTYLTEEMNNRYFK-FSSTLRGVT   95 (625)
Q Consensus        17 ~~~~~~~~~~~l~~i~~~~~V~v~~~~Yl~~l~~ll~~t~~~~l~nYl~wr~i~~~~~~L~~~~~~~~~~-f~~~l~G~~   95 (625)
                      .++-+|.-+-.....-||..|++.+|.|++.+..++.+++...++.|+.|++++..+|||+++++...++ |.++|+|.+
T Consensus       240 ~p~~~w~~~~~~~G~~PD~~iv~~~p~y~~~~~~~~~e~~~~~wKawl~~~~~~~~ap~Lt~dl~~~~f~fy~r~LsG~~  319 (654)
T COG3590         240 LPGDDWSLLFSALGQLPDKVIVVENPFYLKEFASLLAEENWADWKAWLRWKLIRAAAPYLTEDLVDEHFDFYGRTLSGQP  319 (654)
T ss_pred             CCCccHHHHHHHhcCCCCeeEeecCchHHHHHHHHHhcCcHHHHHHHHHHHHHhhcchhhhhHHHHhhhHHHhhhccCCh
Confidence            3445554444444446778999999999999999999999999999999999999999999999999995 679999999


Q ss_pred             CCCcchhhHHHHhhh-hhHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHhhcccCCCCChhhHHHHHHHHhhhcccccC
Q psy2275          96 ARKPRWQECVDETKD-LDIAVGALYIRKYFNQDAKANVETMVRLILDETYKYLSTVDWMDPNTRLAAQDKVKAIIPYVAY  174 (625)
Q Consensus        96 ~~~~r~~~C~~~~~~-~~~~lg~lyv~~~f~~~~~~~v~~m~~~Ik~~~~~~l~~~~Wmd~~tk~~a~~Kl~~~~~~ig~  174 (625)
                      +..+||+..+.+++. |+.++|.+||+.+|++++++.++++|..++++++.+|++++||.++||++|++||+.+..+|||
T Consensus       320 E~r~rwKr~~~l~~~~~geaiG~~Yv~~~Fpp~aKa~m~~lVa~l~~ayk~Ri~~ldWmtpeTrekAl~KL~~ft~kIGY  399 (654)
T COG3590         320 EARDRWKRAVNLAERLFGEAIGLLYVKRYFPPEAKADMEELVANLIKAYKARISKLDWMTPETREKALEKLNKFTAKIGY  399 (654)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhhhccccCHHHHHHHHHHHhccccccCC
Confidence            999999999999987 9999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccchhhhhhcccccccHHHHHHhhcHhHHHHHHHhcCCcceeeccceeecCCCCCCCcccCCCCCCCCcCCCCCCCc
Q psy2275         175 PQELLGEYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPPDAGTQTSRHPLHQDLHYFPHRPAHR  254 (625)
Q Consensus       175 P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~llg~~~~~~~~~~~~k~p~~g~~~~~~~~HqD~~y~~~~~~~~  254 (625)
                      |+.-.+-..|..    ..+.    ++.     ++.+    ..-+                                    
T Consensus       400 P~~wr~y~kL~~----~~~s----l~~-----N~~r----~~~~------------------------------------  426 (654)
T COG3590         400 PDPWRYYSKLEI----KRDS----LYG-----NVLR----ASAF------------------------------------  426 (654)
T ss_pred             Cchhhhhhhhcc----Cchh----HHH-----HHHH----HHHH------------------------------------
Confidence            963222111110    0000    111     0100    0000                                    


Q ss_pred             ceEEEEeeccCcccCCceeeecCCCCCCCCCcccCCCCcccCcccccccccCCCCCCcccccccCCcEEEecCCccccCC
Q psy2275         255 IVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEGGVNAMYHGIRGFDSHDKLNLYMERGDTVFFHPLLIHGSG  334 (625)
Q Consensus       255 ~~t~wi~L~d~~~~nG~l~vvpGSH~~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~~v~~~~~aGd~l~f~~~~~H~s~  334 (625)
                                             .|.       |....|.+                                       
T Consensus       427 -----------------------~~~-------~~l~K~~k---------------------------------------  437 (654)
T COG3590         427 -----------------------NHA-------HELSKIGK---------------------------------------  437 (654)
T ss_pred             -----------------------HHh-------hhHHHhCC---------------------------------------
Confidence                                   000       00011111                                       


Q ss_pred             CCCCccccccccccccchhhh-chHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhhcCChhhhcchhhhcc
Q psy2275         335 TNVTKAVLGTSQRSAGRTQRL-ANPVVKAYLEYMVDIAVMMGASRETAQQELTASLQFESRLRNITKSNEEYRKMSKLSN  413 (625)
Q Consensus       335 ~N~s~~~R~~~~~~~~~~~~~-~~~~~~Ay~~~~~~~~~~~g~~~~~a~~~~~~vl~fE~~LA~~~~~~~~~~~~~~~yn  413 (625)
                                   |+.+.+|. .+.+|||||++.                                            -|
T Consensus       438 -------------PVDr~eW~M~pq~VNAYYnp~--------------------------------------------~N  460 (654)
T COG3590         438 -------------PVDRDEWEMPPQTVNAYYNPQ--------------------------------------------KN  460 (654)
T ss_pred             -------------CCchhhcCCCHHHhhhhcCCC--------------------------------------------Cc
Confidence                         22222333 355899999763                                            46


Q ss_pred             cccHHHHHhhCCCCCCCccCCcccccccchhhHHHHHHHHHhhccchhhHhhcCCCCCCCCHHHHHHHHHHhc-------
Q psy2275         414 LVTISHLEHKYPILGTSFSNDRPSYMNFGSMGWTIGHEITHGFDSTGSRFDKNGTEINWWDPSTREKYKILWL-------  486 (625)
Q Consensus       414 ~~~i~~l~~~~P~l~~~f~~~~p~~l~~g~lG~~ig~e~~~~~d~~~~~f~~~l~~~~W~~~~T~~~a~~k~~-------  486 (625)
                      .|.+|..++|.||    |+++.+...|||++|.+|||||.|+||+.|+.||..|++++||++++++.|+++-.       
T Consensus       461 ~IVFPAAILQ~PF----fd~ea~~a~NYGgIGaVIgHEI~HgFDdqGakfD~~GnL~dWWT~eD~~aF~~~T~~lvaqf~  536 (654)
T COG3590         461 EIVFPAAILQAPF----FDPEADSAANYGGIGAVIGHEIGHGFDDQGAKFDGDGNLNDWWTDEDAAAFKERTKKLVAQFD  536 (654)
T ss_pred             eEeeeHHhcCCCC----CCCCcchhhcccCccceehhhhcccccCCccccCCCCcHHhhcCHHHHHHHHHHHHHHHHHhc
Confidence            7788888899997    99999999999999999999999999999999999999999999999999987620       


Q ss_pred             ---------CC----------------CCCCCCCCCCCCCCCCcCCChhhHHHHHHhhhhhccCCCccccccccCCCCCC
Q psy2275         487 ---------LH----------------LPWAANRPEEPRLPGLQRFSPRQMFWVSAATSYCGLQRPEDLKDNLLNDEHTP  541 (625)
Q Consensus       487 ---------i~----------------~~~~~~~~~~~~l~gl~~~~~~qlFf~~~a~~~c~~~~~~~~~~~~~~~~~~p  541 (625)
                               .|                .++..++.....-|-++.++..|-||+++|+.|....+|+...+.+..|||+|
T Consensus       537 ~~e~~~~~~~g~~lTvgENIaDlGGl~~Al~Ayk~~~~~~pv~dg~tg~qrfF~~wAqiWR~K~r~e~~~~~l~~DpHsP  616 (654)
T COG3590         537 GYEPEGGKDNGNALTVGENIADLGGLAIALDAYKLSLDPAPVIDGFTGLQRFFLNWAQIWRMKARPEEQQMRLSVDPHSP  616 (654)
T ss_pred             CccccccccccceeeeccccccchhHHHHHHHHHHhcCCcccccccchHHHHHHHHHHHHhhccCHHHHHHHHccCCCCC
Confidence                     00                00111111111223345688999999999999999999998888889999999


Q ss_pred             CceeEeeecccccccccccCC
Q psy2275         542 PEWRAVGSLANSVEFGRDFGT  562 (625)
Q Consensus       542 ~~~r~~g~l~N~~eF~~aFdc  562 (625)
                      ++|||||++.|+.+|.++|||
T Consensus       617 ~~fR~Ng~~~N~~~FyeaFdV  637 (654)
T COG3590         617 AEFRVNGPVRNMDEFYEAFDV  637 (654)
T ss_pred             ceeeccCCCCChHHHHHHcCC
Confidence            999999999999999999997

>KOG3624|consensus Back     alignment and domain information
>COG3590 PepO Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR01762 chlorin-enz chlorinating enzymes Back     alignment and domain information
>TIGR02408 ectoine_ThpD ectoine hydroxylase Back     alignment and domain information
>KOG3624|consensus Back     alignment and domain information
>KOG3290|consensus Back     alignment and domain information
>PF05649 Peptidase_M13_N: Peptidase family M13 This is family M13 in the peptidase classification Back     alignment and domain information
>PF01431 Peptidase_M13: Peptidase family M13 This is family M13 in the peptidase classification Back     alignment and domain information
>PF05721 PhyH: Phytanoyl-CoA dioxygenase (PhyH); InterPro: IPR008775 This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins as well as a number of bacterial deoxygenases Back     alignment and domain information
>COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF01431 Peptidase_M13: Peptidase family M13 This is family M13 in the peptidase classification Back     alignment and domain information
>PF05649 Peptidase_M13_N: Peptidase family M13 This is family M13 in the peptidase classification Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PLN00052 prolyl 4-hydroxylase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query625
2a1x_A308 Human Phytanoyl-Coa 2-Hydroxylase In Complex With I 4e-53
1dmt_A696 Structure Of Human Neutral Endopeptidase Complexed 1e-16
1dmt_A696 Structure Of Human Neutral Endopeptidase Complexed 3e-04
3dwb_A670 Structure Of Human Ece-1 Complexed With Phosphorami 1e-14
3dwb_A670 Structure Of Human Ece-1 Complexed With Phosphorami 2e-14
3dwb_A670 Structure Of Human Ece-1 Complexed With Phosphorami 3e-04
3zuk_A699 Crystal Structure Of Mycobacterium Tuberculosis Zin 5e-11
3zuk_A699 Crystal Structure Of Mycobacterium Tuberculosis Zin 1e-06
2opw_A291 Crystal Structure Of Human Phytanoyl-Coa Dioxygenas 2e-05
>pdb|2A1X|A Chain A, Human Phytanoyl-Coa 2-Hydroxylase In Complex With Iron And 2- Oxoglutarate Length = 308 Back     alignment and structure 
Iteration: 1

 Score =  206 bits (523), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 95/161 (59%), Positives = 122/161 (75%), Gaps = 3/161 (1%)
Query: 181 EYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPPDAGTQTSRHPL 240
           E +  KVQ+   D+   +Y    ++L YVE F GP+I A+H+MLINKPPD+G +TSRHPL
Sbjct: 85  EKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPL 144
Query: 241 HQDLHYFPHRPAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEGGVNAM 300
           HQDLHYFP RP+  IV AWTAME I ++NGCL VLP TH+  GSL  H+YP+WEGGVN M
Sbjct: 145 HQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHK--GSLKPHDYPKWEGGVNKM 202
Query: 301 YHGIRGFDSHD-KLNLYMERGDTVFFHPLLIHGSGTNVTKA 340
           +HGI+ ++ +  +++L ME+GDTVFFHPLLIHGSG N T+ 
Sbjct: 203 FHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQG 243
>pdb|1DMT|A Chain A, Structure Of Human Neutral Endopeptidase Complexed With Phosphoramidon Length = 696 Back     alignment and structure
>pdb|1DMT|A Chain A, Structure Of Human Neutral Endopeptidase Complexed With Phosphoramidon Length = 696 Back     alignment and structure
>pdb|3DWB|A Chain A, Structure Of Human Ece-1 Complexed With Phosphoramidon Length = 670 Back     alignment and structure
>pdb|3DWB|A Chain A, Structure Of Human Ece-1 Complexed With Phosphoramidon Length = 670 Back     alignment and structure
>pdb|3DWB|A Chain A, Structure Of Human Ece-1 Complexed With Phosphoramidon Length = 670 Back     alignment and structure
>pdb|3ZUK|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Zinc Metalloprotease Zmp1 In Complex With Inhibitor Length = 699 Back     alignment and structure
>pdb|3ZUK|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Zinc Metalloprotease Zmp1 In Complex With Inhibitor Length = 699 Back     alignment and structure
>pdb|2OPW|A Chain A, Crystal Structure Of Human Phytanoyl-Coa Dioxygenase Phyhd1 (Apo) Length = 291 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query625
2a1x_A308 Phytanoyl-COA dioxygenase; beta jelly roll, double 5e-51
1r1h_A696 Neprilysin; enkephalinase, glycoprotein, metallopr 3e-44
1r1h_A696 Neprilysin; enkephalinase, glycoprotein, metallopr 3e-38
1r1h_A696 Neprilysin; enkephalinase, glycoprotein, metallopr 1e-14
1r1h_A 696 Neprilysin; enkephalinase, glycoprotein, metallopr 1e-08
3dwb_A670 ECE-1, endothelin-converting enzyme 1; protein, di 9e-42
3dwb_A670 ECE-1, endothelin-converting enzyme 1; protein, di 2e-34
3dwb_A670 ECE-1, endothelin-converting enzyme 1; protein, di 7e-14
3dwb_A 670 ECE-1, endothelin-converting enzyme 1; protein, di 4e-09
3emr_A310 ECTD; double stranded beta helix, oxidoreductase; 1e-41
3zuk_A699 Endopeptidase, peptidase family M13; hydrolase-inh 2e-40
3zuk_A699 Endopeptidase, peptidase family M13; hydrolase-inh 9e-33
3zuk_A699 Endopeptidase, peptidase family M13; hydrolase-inh 7e-13
3zuk_A 699 Endopeptidase, peptidase family M13; hydrolase-inh 3e-09
2rdq_A288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II 8e-38
2opw_A291 Phyhd1 protein; double-stranded beta helix, oxygen 6e-34
2fct_A313 Syringomycin biosynthesis enzyme 2; mononuclear ir 6e-28
3gja_A319 CYTC3; halogenase, beta barrel, biosynthetic prote 7e-28
3nnf_A344 CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependen 2e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9 Length = 308 Back     alignment and structure
 Score =  177 bits (451), Expect = 5e-51
 Identities = 93/161 (57%), Positives = 120/161 (74%), Gaps = 3/161 (1%)

Query: 180 GEYLYNKVQELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPPDAGTQTSRHP 239
            E +  KVQ+   D+   +Y    ++L YVE F GP+I A+H+MLINKPPD+G +TSRHP
Sbjct: 84  SEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHP 143

Query: 240 LHQDLHYFPHRPAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEGGVNA 299
           LHQDLHYFP RP+  IV AWTAME I ++NGCL VLP TH+    L  H+YP+WEGGVN 
Sbjct: 144 LHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGS--LKPHDYPKWEGGVNK 201

Query: 300 MYHGIRGFD-SHDKLNLYMERGDTVFFHPLLIHGSGTNVTK 339
           M+HGI+ ++ +  +++L ME+GDTVFFHPLLIHGSG N T+
Sbjct: 202 MFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQ 242
>1r1h_A Neprilysin; enkephalinase, glycoprotein, metalloprotease, hydrolase; HET: NAG BIR; 1.95A {Homo sapiens} SCOP: d.92.1.4 PDB: 1dmt_A* 1r1i_A* 1r1j_A* 1y8j_A* 2qpj_A* 2yb9_A* Length = 696 Back     alignment and structure
>1r1h_A Neprilysin; enkephalinase, glycoprotein, metalloprotease, hydrolase; HET: NAG BIR; 1.95A {Homo sapiens} SCOP: d.92.1.4 PDB: 1dmt_A* 1r1i_A* 1r1j_A* 1y8j_A* 2qpj_A* 2yb9_A* Length = 696 Back     alignment and structure
>1r1h_A Neprilysin; enkephalinase, glycoprotein, metalloprotease, hydrolase; HET: NAG BIR; 1.95A {Homo sapiens} SCOP: d.92.1.4 PDB: 1dmt_A* 1r1i_A* 1r1j_A* 1y8j_A* 2qpj_A* 2yb9_A* Length = 696 Back     alignment and structure
>1r1h_A Neprilysin; enkephalinase, glycoprotein, metalloprotease, hydrolase; HET: NAG BIR; 1.95A {Homo sapiens} SCOP: d.92.1.4 PDB: 1dmt_A* 1r1i_A* 1r1j_A* 1y8j_A* 2qpj_A* 2yb9_A* Length = 696 Back     alignment and structure
>3dwb_A ECE-1, endothelin-converting enzyme 1; protein, disease mutation, glycoprotein, hirschsprung diseas hydrolase, membrane, metal-binding; HET: 5HD RDF; 2.38A {Homo sapiens} Length = 670 Back     alignment and structure
>3dwb_A ECE-1, endothelin-converting enzyme 1; protein, disease mutation, glycoprotein, hirschsprung diseas hydrolase, membrane, metal-binding; HET: 5HD RDF; 2.38A {Homo sapiens} Length = 670 Back     alignment and structure
>3dwb_A ECE-1, endothelin-converting enzyme 1; protein, disease mutation, glycoprotein, hirschsprung diseas hydrolase, membrane, metal-binding; HET: 5HD RDF; 2.38A {Homo sapiens} Length = 670 Back     alignment and structure
>3dwb_A ECE-1, endothelin-converting enzyme 1; protein, disease mutation, glycoprotein, hirschsprung diseas hydrolase, membrane, metal-binding; HET: 5HD RDF; 2.38A {Homo sapiens} Length = 670 Back     alignment and structure
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens} Length = 310 Back     alignment and structure
>3zuk_A Endopeptidase, peptidase family M13; hydrolase-inhibitor complex, pathogenicity, phagosome matura; HET: RDF 211 PGE PG4; 2.60A {Mycobacterium tuberculosis} Length = 699 Back     alignment and structure
>3zuk_A Endopeptidase, peptidase family M13; hydrolase-inhibitor complex, pathogenicity, phagosome matura; HET: RDF 211 PGE PG4; 2.60A {Mycobacterium tuberculosis} Length = 699 Back     alignment and structure
>3zuk_A Endopeptidase, peptidase family M13; hydrolase-inhibitor complex, pathogenicity, phagosome matura; HET: RDF 211 PGE PG4; 2.60A {Mycobacterium tuberculosis} Length = 699 Back     alignment and structure
>3zuk_A Endopeptidase, peptidase family M13; hydrolase-inhibitor complex, pathogenicity, phagosome matura; HET: RDF 211 PGE PG4; 2.60A {Mycobacterium tuberculosis} Length = 699 Back     alignment and structure
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A* Length = 291 Back     alignment and structure
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A* Length = 313 Back     alignment and structure
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A* Length = 319 Back     alignment and structure
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A Length = 344 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query625
3dwb_A670 ECE-1, endothelin-converting enzyme 1; protein, di 100.0
3zuk_A699 Endopeptidase, peptidase family M13; hydrolase-inh 100.0
1r1h_A696 Neprilysin; enkephalinase, glycoprotein, metallopr 100.0
3zuk_A699 Endopeptidase, peptidase family M13; hydrolase-inh 100.0
3dwb_A670 ECE-1, endothelin-converting enzyme 1; protein, di 100.0
1r1h_A696 Neprilysin; enkephalinase, glycoprotein, metallopr 100.0
2a1x_A308 Phytanoyl-COA dioxygenase; beta jelly roll, double 99.95
3emr_A310 ECTD; double stranded beta helix, oxidoreductase; 99.91
2opw_A291 Phyhd1 protein; double-stranded beta helix, oxygen 99.91
3gja_A319 CYTC3; halogenase, beta barrel, biosynthetic prote 99.91
2fct_A313 Syringomycin biosynthesis enzyme 2; mononuclear ir 99.89
2rdq_A288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II 99.86
3nnf_A344 CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependen 99.72
2dbn_A461 Hypothetical protein YBIU; alpha/beta structure, s 98.01
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 93.98
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 92.52
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 87.89
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 83.47
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 80.89
>3dwb_A ECE-1, endothelin-converting enzyme 1; protein, disease mutation, glycoprotein, hirschsprung diseas hydrolase, membrane, metal-binding; HET: 5HD RDF; 2.38A {Homo sapiens} SCOP: d.92.1.0 Back     alignment and structure
Probab=100.00  E-value=5.6e-57  Score=512.27  Aligned_cols=381  Identities=26%  Similarity=0.530  Sum_probs=297.2

Q ss_pred             CCCCccCc-ccc-c--CCCCCCeEEEcCchhHHHHHHHHhcCChHHHHHHHHHHHHHHhhhhccHHHHHHHHHhhhhccC
Q psy2275          18 RGLDKPDL-SHL-S--PVKPDEVVNLEAPDFFRSFEPLLKATPKRVLANYLLWQVMSFSSTYLTEEMNNRYFKFSSTLRG   93 (625)
Q Consensus        18 ~~~~~~~~-~~l-~--~i~~~~~V~v~~~~Yl~~l~~ll~~t~~~~l~nYl~wr~i~~~~~~L~~~~~~~~~~f~~~l~G   93 (625)
                      ++|||..+ ..+ .  +++.++.|+|.+|+||++|.++|.+++.++|+|||+||+|.+++++|+++|+++.++|.+.++|
T Consensus       244 p~i~w~~~l~~~~~~~~~~~~~~v~v~~~~yl~~l~~ll~~t~~~~l~nYl~~~~i~~~~~~L~~~~~~~~~~f~~~l~G  323 (670)
T 3dwb_A          244 PAINWLPFLNTIFYPVEINESEPIVVYDKEYLEQISTLINTTDRCLLNNYMIWNLVRKTSSFLDQRFQDADEKFMEVMYG  323 (670)
T ss_dssp             TTSCHHHHHHHHSTTSCCCTTCEEEESCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHTTC--
T ss_pred             CCCCHHHHHHHHccccCCCCCCeEEEcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcC
Confidence            56666443 332 2  4677899999999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-CCCcchhhHHHHhhh-hhHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHhhcccCCCCChhhHHHHHHHHhhhccc
Q psy2275          94 VT-ARKPRWQECVDETKD-LDIAVGALYIRKYFNQDAKANVETMVRLILDETYKYLSTVDWMDPNTRLAAQDKVKAIIPY  171 (625)
Q Consensus        94 ~~-~~~~r~~~C~~~~~~-~~~~lg~lyv~~~f~~~~~~~v~~m~~~Ik~~~~~~l~~~~Wmd~~tk~~a~~Kl~~~~~~  171 (625)
                      .+ +..|||+.|+..++. ||.++|++||+++|++++++.+.+|+++||++|.++|.+++|||++||++|++||++|..+
T Consensus       324 ~~~~~~~r~~~C~~~v~~~l~~a~g~lyv~~~f~~~~k~~~~~mv~~ik~~f~~~l~~~~Wm~~~Tk~~A~~Kl~~~~~~  403 (670)
T 3dwb_A          324 TKKTSLPRWKFCVSDTENNLGFALGPMFVKATFAEDSKSIATEIILEIKKAFEESLSTLKWMDEETRKSAKEKADAIYNM  403 (670)
T ss_dssp             --------CTHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHCEEE
T ss_pred             CCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCcCCCHHHHHHHHHHHHHHHhh
Confidence            87 788999999999986 9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCccccchhhhhhc-ccccccHHHHHHhhcHhHHHHHHHhcCCcceeeccceeecCCCCCCCcccCCCCCCCCcCCCC
Q psy2275         172 VAYPQELLGEYLYNKV-QELVYDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPPDAGTQTSRHPLHQDLHYFPHR  250 (625)
Q Consensus       172 ig~P~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~~~~llg~~~~~~~~~~~~k~p~~g~~~~~~~~HqD~~y~~~~  250 (625)
                      ||||+++.+++.|+++ ..+...+.  +++.+  ++.+.+.-.....     .-+.+|+                     
T Consensus       404 IGyPd~~~~~~~l~~~Y~~l~i~~~--~~~~n--~~~~~~~~~~~~~-----~~l~~p~---------------------  453 (670)
T 3dwb_A          404 IGYPNFIMDPKELDKVFNDYTAVPD--LYFEN--AMRFFNFSWRVTA-----DQLRKAP---------------------  453 (670)
T ss_dssp             EESCGGGGSHHHHHHHHTTCCCCTT--CHHHH--HHHHHHHHHHHHH-----TTTTSCC---------------------
T ss_pred             hCCCCccCChHHHHHHhhcccCCCc--cHHHH--HHHHHHHHHHHHH-----HHhCCCC---------------------
Confidence            9999999988888774 33333221  11111  1111110000000     0000110                     


Q ss_pred             CCCcceEEEEeeccCcccCCceeeecCCCCCCCCCcccCCCCcccCcccccccccCCCCCCcccccccCCcEEEecCCcc
Q psy2275         251 PAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEGGVNAMYHGIRGFDSHDKLNLYMERGDTVFFHPLLI  330 (625)
Q Consensus       251 ~~~~~~t~wi~L~d~~~~nG~l~vvpGSH~~~~~l~~~~~~~w~~~~~~~~~~~~~~~~~~~v~~~~~aGd~l~f~~~~~  330 (625)
                                                            +...|..                                   
T Consensus       454 --------------------------------------d~~~w~~-----------------------------------  460 (670)
T 3dwb_A          454 --------------------------------------NRDQWSM-----------------------------------  460 (670)
T ss_dssp             --------------------------------------CTTCCSS-----------------------------------
T ss_pred             --------------------------------------ChhhcCC-----------------------------------
Confidence                                                  0011110                                   


Q ss_pred             ccCCCCCCccccccccccccchhhhchHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhhcCChhhhcchhh
Q psy2275         331 HGSGTNVTKAVLGTSQRSAGRTQRLANPVVKAYLEYMVDIAVMMGASRETAQQELTASLQFESRLRNITKSNEEYRKMSK  410 (625)
Q Consensus       331 H~s~~N~s~~~R~~~~~~~~~~~~~~~~~~~Ay~~~~~~~~~~~g~~~~~a~~~~~~vl~fE~~LA~~~~~~~~~~~~~~  410 (625)
                                               .+.++||||.                                            .
T Consensus       461 -------------------------~p~~vnAyY~--------------------------------------------p  471 (670)
T 3dwb_A          461 -------------------------TPPMVNAYYS--------------------------------------------P  471 (670)
T ss_dssp             -------------------------CTTCSCCEEE--------------------------------------------T
T ss_pred             -------------------------CcceeEEEec--------------------------------------------c
Confidence                                     1123344432                                            2


Q ss_pred             hcccccHHHHHhhCCCCCCCccCCcccccccchhhHHHHHHHHHhhccchhhHhhcCCCCCCCCHHHHHHHHHHhc----
Q psy2275         411 LSNLVTISHLEHKYPILGTSFSNDRPSYMNFGSMGWTIGHEITHGFDSTGSRFDKNGTEINWWDPSTREKYKILWL----  486 (625)
Q Consensus       411 ~yn~~~i~~l~~~~P~l~~~f~~~~p~~l~~g~lG~~ig~e~~~~~d~~~~~f~~~l~~~~W~~~~T~~~a~~k~~----  486 (625)
                      ..|.|.++...+++|+    |+++.|.++|||++|.+|||||+|+||+.|+.||+.|+..+||+++|+++|.++..    
T Consensus       472 ~~N~I~fPa~iLq~Pf----f~~~~p~a~nyg~iG~vigHEi~H~FD~~G~~~D~~Gn~~~wWt~~~~~~f~~r~~Cl~~  547 (670)
T 3dwb_A          472 TKNEIVFPAGILQAPF----YTRSSPKALNFGGIGVVVGHELTHAFDDQGREYDKDGNLRPWWKNSSVEAFKRQTECMVE  547 (670)
T ss_dssp             TTTEEEEEGGGSSTTT----CCTTSCHHHHHHTHHHHHHHHHHHTTSTTGGGBCTTSCBSCCSCHHHHHHHHHHHHHHHH
T ss_pred             ccccccccHHHcCCCC----CCCchHHHHHHHHHHHHHHHHHhhccCcccceECCCCCccCCCCHHHHHHHHHHHHHHHH
Confidence            3577777888888897    89999999999999999999999999999999999999999999999999987620    


Q ss_pred             ---------------------------CCCCCCCCC------CCCCCCCCCcCCChhhHHHHHHhhhhhccCCCcccccc
Q psy2275         487 ---------------------------LHLPWAANR------PEEPRLPGLQRFSPRQMFWVSAATSYCGLQRPEDLKDN  533 (625)
Q Consensus       487 ---------------------------i~~~~~~~~------~~~~~l~gl~~~~~~qlFf~~~a~~~c~~~~~~~~~~~  533 (625)
                                                 +..+|.++.      +.+..+|++ ++|++|+||++||+.||+..+|....+.
T Consensus       548 qy~~~~~~g~~~ng~~tl~EniAD~gGl~~A~~Ay~~~~~~~~~~~~lp~~-~~t~~QlFF~~~A~~wc~~~~~~~~~~~  626 (670)
T 3dwb_A          548 QYSNYSVNGEPVNGRHTLGENIADNGGLKAAYRAYQNWVKKNGAEHSLPTL-GLTNNQLFFLGFAQVWCSVRTPESSHEG  626 (670)
T ss_dssp             HHTTCBSSSSBCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSS-CCCHHHHHHHHHHHHTCEEECHHHHHHH
T ss_pred             HHhcccCCCCccCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC-CCchhhHHHHHHHHHHhccCCHHHHHHH
Confidence                                       001121111      234568999 7999999999999999999888877777


Q ss_pred             ccCCCCCCCceeEeeecccccccccccCC--CCCCCCCCCCCCC
Q psy2275         534 LLNDEHTPPEWRAVGSLANSVEFGRDFGT--GSRFDKNGTEFNW  575 (625)
Q Consensus       534 ~~~~~~~p~~~r~~g~l~N~~eF~~aFdc--Gs~~d~~G~~~~W  575 (625)
                      +.+|+|+|.++||||+++|+++|++||+|  |++|+|..+|+.|
T Consensus       627 ~~~d~Hsp~~~Rvn~~l~N~~~F~~aF~C~~gs~Mnp~~kC~iW  670 (670)
T 3dwb_A          627 LITDPHSPSRFRVIGSLSNSKEFSEHFRCPPGSPMNPPHKCEVW  670 (670)
T ss_dssp             HHHCSSCCHHHHHHHHHHTCHHHHHHHTCCTTCTTSCSSCCCCC
T ss_pred             hccCCCCCcceeEeeehhcCHHHHHhcCCCCCCCCCCcCceeeC
Confidence            78899999999999999999999999999  9999999999998
>3zuk_A Endopeptidase, peptidase family M13; hydrolase-inhibitor complex, pathogenicity, phagosome matura; HET: RDF 211 PGE PG4; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>1r1h_A Neprilysin; enkephalinase, glycoprotein, metalloprotease, hydrolase; HET: NAG BIR; 1.95A {Homo sapiens} SCOP: d.92.1.4 PDB: 1dmt_A* 1r1i_A* 1r1j_A* 1y8j_A* 2qpj_A* 2yb9_A* Back     alignment and structure
>3zuk_A Endopeptidase, peptidase family M13; hydrolase-inhibitor complex, pathogenicity, phagosome matura; HET: RDF 211 PGE PG4; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3dwb_A ECE-1, endothelin-converting enzyme 1; protein, disease mutation, glycoprotein, hirschsprung diseas hydrolase, membrane, metal-binding; HET: 5HD RDF; 2.38A {Homo sapiens} SCOP: d.92.1.0 Back     alignment and structure
>1r1h_A Neprilysin; enkephalinase, glycoprotein, metalloprotease, hydrolase; HET: NAG BIR; 1.95A {Homo sapiens} SCOP: d.92.1.4 PDB: 1dmt_A* 1r1i_A* 1r1j_A* 1y8j_A* 2qpj_A* 2yb9_A* Back     alignment and structure
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9 Back     alignment and structure
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens} Back     alignment and structure
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A* Back     alignment and structure
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A* Back     alignment and structure
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A* Back     alignment and structure
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A Back     alignment and structure
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 625
d1dmta_696 d.92.1.4 (A:) Neutral endopeptidase (neprilysin) { 9e-23
d1dmta_696 d.92.1.4 (A:) Neutral endopeptidase (neprilysin) { 5e-22
d1dmta_ 696 d.92.1.4 (A:) Neutral endopeptidase (neprilysin) { 7e-09
d1dmta_696 d.92.1.4 (A:) Neutral endopeptidase (neprilysin) { 8e-08
d2a1xa1296 b.82.2.9 (A:43-338) Phytanoyl-CoA dioxygenase, Phy 7e-13
d2fcta1308 b.82.2.9 (A:3-310) Syringomycin biosynthesis enzym 8e-08
d2csga1417 b.82.2.12 (A:3-419) Hypothetical protein YbiU {Sal 2e-04
>d1dmta_ d.92.1.4 (A:) Neutral endopeptidase (neprilysin) {Human (Homo sapiens) [TaxId: 9606]} Length = 696 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Neutral endopeptidase (neprilysin)
domain: Neutral endopeptidase (neprilysin)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 9e-23
 Identities = 53/274 (19%), Positives = 100/274 (36%), Gaps = 10/274 (3%)

Query: 30  PVKPDEVVNLEAPDFFRSFEPLLKATPKRVLANYLLWQVMSFSSTYLTEEMNNRYFKFSS 89
            +  +E V + AP++    +P+L     R L N + W+ +    + L+         F  
Sbjct: 283 SITNEEDVVVYAPEYLTKLKPILTKYSARDLQNLMSWRFIMDLVSSLSRTYKESRNAFRK 342

Query: 90  TLRGVTARKPRWQECVD-ETKDLDIAVGALYIRKYFNQDAKANVETMVRLILDETYKYLS 148
            L G T+    W+ C +    +++ AVG LY+   F  ++K  VE ++  I +   + L 
Sbjct: 343 ALYGTTSETATWRRCANYVNGNMENAVGRLYVEAAFAGESKHVVEDLIAQIREVFIQTLD 402

Query: 149 TVDWMDPNTRLAAQDKVKAIIPYVAYPQELLG-------EYLYNKVQELVYDEVFEKYT- 200
            + WMD  T+  A++K  AI   + YP +++        EYL    +E  Y E   +   
Sbjct: 403 DLTWMDAETKKRAEEKALAIKERIGYPDDIVSNDNKLNNEYLELNYKEDEYFENIIQNLK 462

Query: 201 -MHKKLLDYVESFIGPHIRAIHSMLINKPPDAGTQTSRHPLHQDLHYFPHRPAHRIVAAW 259
               K L  +   +        + ++N    +G      P       F        +   
Sbjct: 463 FSQSKQLKKLREKVDKDEWISGAAVVNAFYSSGRNQIVFPAGILQPPFFSAQQSNSLNYG 522

Query: 260 TAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEW 293
                I  +    F     + +    L   + + 
Sbjct: 523 GIGMVIGHEITHGFDDNGRNFNKDGDLVDWWTQQ 556
>d1dmta_ d.92.1.4 (A:) Neutral endopeptidase (neprilysin) {Human (Homo sapiens) [TaxId: 9606]} Length = 696 Back     information, alignment and structure
>d1dmta_ d.92.1.4 (A:) Neutral endopeptidase (neprilysin) {Human (Homo sapiens) [TaxId: 9606]} Length = 696 Back     information, alignment and structure
>d1dmta_ d.92.1.4 (A:) Neutral endopeptidase (neprilysin) {Human (Homo sapiens) [TaxId: 9606]} Length = 696 Back     information, alignment and structure
>d2a1xa1 b.82.2.9 (A:43-338) Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapiens) [TaxId: 9606]} Length = 296 Back     information, alignment and structure
>d2fcta1 b.82.2.9 (A:3-310) Syringomycin biosynthesis enzyme 2, SyrB2 {Pseudomonas syringae pv. syringae [TaxId: 321]} Length = 308 Back     information, alignment and structure
>d2csga1 b.82.2.12 (A:3-419) Hypothetical protein YbiU {Salmonella typhimurium [TaxId: 90371]} Length = 417 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query625
d1dmta_696 Neutral endopeptidase (neprilysin) {Human (Homo sa 100.0
d2a1xa1296 Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapie 99.94
d2fcta1308 Syringomycin biosynthesis enzyme 2, SyrB2 {Pseudom 99.92
d1dmta_696 Neutral endopeptidase (neprilysin) {Human (Homo sa 99.79
d2csga1417 Hypothetical protein YbiU {Salmonella typhimurium 98.01
>d1dmta_ d.92.1.4 (A:) Neutral endopeptidase (neprilysin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Neutral endopeptidase (neprilysin)
domain: Neutral endopeptidase (neprilysin)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-42  Score=395.68  Aligned_cols=377  Identities=28%  Similarity=0.527  Sum_probs=293.8

Q ss_pred             cCCCCccCcc-cc-----cCCCCCCeEEEcCchhHHHHHHHHhcCChHHHHHHHHHHHHHHhhhhccHHHHHHHHHhhhh
Q psy2275          17 GRGLDKPDLS-HL-----SPVKPDEVVNLEAPDFFRSFEPLLKATPKRVLANYLLWQVMSFSSTYLTEEMNNRYFKFSST   90 (625)
Q Consensus        17 ~~~~~~~~~~-~l-----~~i~~~~~V~v~~~~Yl~~l~~ll~~t~~~~l~nYl~wr~i~~~~~~L~~~~~~~~~~f~~~   90 (625)
                      .+.|+|.+|- .+     .++++++.|+|.+|+||++|..||.++++++|+|||+|+++.+++|+|+.++++....|...
T Consensus       264 ~~~~~W~~~l~~~~~~~~~~~~~~~~v~v~~~~yl~~L~~ll~~~~~~~l~nYl~~~~l~~~~~~l~~~~~~~~~~~~~~  343 (696)
T d1dmta_         264 GKPFSWLNFTNEIMSTVNISITNEEDVVVYAPEYLTKLKPILTKYSARDLQNLMSWRFIMDLVSSLSRTYKESRNAFRKA  343 (696)
T ss_dssp             TCCCCHHHHHHHHHGGGTCCCCTTCEEEESCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHGGGSCHHHHHTTHHHHHH
T ss_pred             cCCCCHHHHHHHHHHhcCCCCCCCceEEEeChHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            4677775552 22     45788999999999999999999999999999999999999999999999999999999988


Q ss_pred             ccCccCCCcchhhHHHHhhh-hhHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHhhcccCCCCChhhHHHHHHHHhhhc
Q psy2275          91 LRGVTARKPRWQECVDETKD-LDIAVGALYIRKYFNQDAKANVETMVRLILDETYKYLSTVDWMDPNTRLAAQDKVKAII  169 (625)
Q Consensus        91 l~G~~~~~~r~~~C~~~~~~-~~~~lg~lyv~~~f~~~~~~~v~~m~~~Ik~~~~~~l~~~~Wmd~~tk~~a~~Kl~~~~  169 (625)
                      +.|.....+||+.|++.++. ||.+++++|++.+++++.+..+++|+++||.+|.+.|.+++|||++||..|++|+++|+
T Consensus       344 ~~~~~~~~~~~~~C~~~~~~~~p~~~~~~~~~~~~~~~~~~~v~~m~~~ik~~~~~~l~~~~Wld~~tk~~a~~Kl~~~~  423 (696)
T d1dmta_         344 LYGTTSETATWRRCANYVNGNMENAVGRLYVEAAFAGESKHVVEDLIAQIREVFIQTLDDLTWMDAETKKRAEEKALAIK  423 (696)
T ss_dssp             HHCCSSCCCHHHHHHHHHHHHSHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHCE
T ss_pred             hcCCccCccHHHHHHHHHHhhHHHHHhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHhhh
Confidence            88888888999999999986 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCcccc-chhhhhhc-cccc--ccHHHHHHhhcHhHHHHHHHhcCCcceeeccceeecCCCCCCCcccCCCCCCCC
Q psy2275         170 PYVAYPQELL-GEYLYNKV-QELV--YDEVFEKYTMHKKLLDYVESFIGPHIRAIHSMLINKPPDAGTQTSRHPLHQDLH  245 (625)
Q Consensus       170 ~~ig~P~~~~-~~~~l~~~-~~~~--~~~~~~~~~~~~~l~~~~~~llg~~~~~~~~~~~~k~p~~g~~~~~~~~HqD~~  245 (625)
                      ..+|+|++.. +...++++ ..+.  .+..+..+...-+..  .+..+..         +.++.             |. 
T Consensus       424 ~~ig~p~~~~~~~~~~~~~y~~l~~~~~~~~~n~~~~~~~~--~~~~~~~---------l~~~~-------------~~-  478 (696)
T d1dmta_         424 ERIGYPDDIVSNDNKLNNEYLELNYKEDEYFENIIQNLKFS--QSKQLKK---------LREKV-------------DK-  478 (696)
T ss_dssp             EEEESCTHHHHCHHHHHHHTTTCCCCTTCHHHHHHHHHHHH--HHHHHTT---------TTSBC-------------CT-
T ss_pred             hhhcCChhhccchhhhhhhhccccCCcchHHHHHHHHHHHH--HHHHHHH---------hcCcC-------------Cc-
Confidence            9999998764 44445543 2221  122222222111100  0000000         00000             00 


Q ss_pred             cCCCCCCCcceEEEEeeccCcccCCceeeecCCCCCCCCCcccCCCCccc---CcccccccccCCCCCCcccccccCCcE
Q psy2275         246 YFPHRPAHRIVAAWTAMERIDKDNGCLFVLPRTHRDPGSLLQHEYPEWEG---GVNAMYHGIRGFDSHDKLNLYMERGDT  322 (625)
Q Consensus       246 y~~~~~~~~~~t~wi~L~d~~~~nG~l~vvpGSH~~~~~l~~~~~~~w~~---~~~~~~~~~~~~~~~~~v~~~~~aGd~  322 (625)
                                                                   ..|..   .+.+.                      
T Consensus       479 ---------------------------------------------~~~~~~~~~~~~~----------------------  491 (696)
T d1dmta_         479 ---------------------------------------------DEWISGAAVVNAF----------------------  491 (696)
T ss_dssp             ---------------------------------------------TCCSSCSSCSCCE----------------------
T ss_pred             ---------------------------------------------cccccCccccccc----------------------
Confidence                                                         00000   00000                      


Q ss_pred             EEecCCccccCCCCCCccccccccccccchhhhchHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhhcCCh
Q psy2275         323 VFFHPLLIHGSGTNVTKAVLGTSQRSAGRTQRLANPVVKAYLEYMVDIAVMMGASRETAQQELTASLQFESRLRNITKSN  402 (625)
Q Consensus       323 l~f~~~~~H~s~~N~s~~~R~~~~~~~~~~~~~~~~~~~Ay~~~~~~~~~~~g~~~~~a~~~~~~vl~fE~~LA~~~~~~  402 (625)
                                                                                                      
T Consensus       492 --------------------------------------------------------------------------------  491 (696)
T d1dmta_         492 --------------------------------------------------------------------------------  491 (696)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhcchhhhcccccHHHHHhhCCCCCCCccCCcccccccchhhHHHHHHHHHhhccchhhHhhcCCCCCCCCHHHHHHHH
Q psy2275         403 EEYRKMSKLSNLVTISHLEHKYPILGTSFSNDRPSYMNFGSMGWTIGHEITHGFDSTGSRFDKNGTEINWWDPSTREKYK  482 (625)
Q Consensus       403 ~~~~~~~~~yn~~~i~~l~~~~P~l~~~f~~~~p~~l~~g~lG~~ig~e~~~~~d~~~~~f~~~l~~~~W~~~~T~~~a~  482 (625)
                           +....|.+.++....+.|+    |+.+.|.+++||.+|.+|||++.|+||..+..|+..|+..+||++.|.+.+.
T Consensus       492 -----y~~~~n~i~vp~~~l~~p~----~~~~~~~~~~~~~lG~~l~~el~~a~d~~~~~~d~~g~~~~w~~~~~~~~~~  562 (696)
T d1dmta_         492 -----YSSGRNQIVFPAGILQPPF----FSAQQSNSLNYGGIGMVIGHEITHGFDDNGRNFNKDGDLVDWWTQQSASNFK  562 (696)
T ss_dssp             -----EETTTTEEEEEGGGSSTTT----CCTTSCHHHHHHTHHHHHHHHHHGGGSTTGGGBCTTSCBCCCSCHHHHHHHH
T ss_pred             -----cChhhhhhhhhHHhhcccc----cChhHHHHHHHhhhHHHHHHHHHHHHHhhceeeCCCCcccccccHHHHHHHH
Confidence                 1112345555555555665    8889999999999999999999999999999999999999999999998887


Q ss_pred             HHhc----------------------------------CCCCCCCC------CCCCCCCCCCcCCChhhHHHHHHhhhhh
Q psy2275         483 ILWL----------------------------------LHLPWAAN------RPEEPRLPGLQRFSPRQMFWVSAATSYC  522 (625)
Q Consensus       483 ~k~~----------------------------------i~~~~~~~------~~~~~~l~gl~~~~~~qlFf~~~a~~~c  522 (625)
                      ++..                                  +..+|.++      +..+..+||+ +++++|+||++||+.||
T Consensus       563 ~~~~Cl~~qy~~~~~~~~~~~~~n~~~tl~E~iaD~~gl~~a~~ay~~~~~~~~~~~~lp~~-~~t~~QLFFi~~a~~~C  641 (696)
T d1dmta_         563 EQSQCMVYQYGNFSWDLAGGQHLNGINTLGENIADNGGLGQAYRAYQNYIKKNGEEKLLPGL-DLNHKQLFFLNFAQVWC  641 (696)
T ss_dssp             HHHHHHHHHHHTCEEGGGTTEECCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCBCTTC-CCCHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhccccccccCcccChhhhhhHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC-CCChhhHHHHHHHHHHH
Confidence            6520                                  00111111      1234568888 59999999999999999


Q ss_pred             ccCCCccccccccCCCCCCCceeEeeecccccccccccCC--CCCCCCCCCCCCC
Q psy2275         523 GLQRPEDLKDNLLNDEHTPPEWRAVGSLANSVEFGRDFGT--GSRFDKNGTEFNW  575 (625)
Q Consensus       523 ~~~~~~~~~~~~~~~~~~p~~~r~~g~l~N~~eF~~aFdc--Gs~~d~~G~~~~W  575 (625)
                      +..++....+...+++|+|+++|||++++|++||++||+|  |+.|+|.-+|..|
T Consensus       642 ~~~~~~~~~~~~~~~~h~p~~~RvN~~L~n~~eFa~aF~C~~gs~MnP~~kC~~W  696 (696)
T d1dmta_         642 GTYRPEYAVNSIKTDVHSPGNFRIIGTLQNSAEFSEAFHCRKNSYMNPEKKCRVW  696 (696)
T ss_dssp             EEECHHHHHHHHHHCSSCCHHHHHHHHHHTCHHHHHHTTCCTTSTTCCSCCCCCC
T ss_pred             ccCCHHHHHHHhccCCCCcHHHHhHHHHhcCHHHHHhcCCCCCCCCCCccCceeC
Confidence            9888877777777899999999999999999999999999  9999999999998
>d2a1xa1 b.82.2.9 (A:43-338) Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fcta1 b.82.2.9 (A:3-310) Syringomycin biosynthesis enzyme 2, SyrB2 {Pseudomonas syringae pv. syringae [TaxId: 321]} Back     information, alignment and structure
>d1dmta_ d.92.1.4 (A:) Neutral endopeptidase (neprilysin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2csga1 b.82.2.12 (A:3-419) Hypothetical protein YbiU {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure