Psyllid ID: psy2288

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------
Protein Sequence
MKLDDMDSVLTNDPVENASKILALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLFGGIG
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHHHHcccccccccccccccccccccHHHHHHHcccccccccccccccccccccHHHHHcccccccccccccccccccccccHHHHHHcccccccccccccccccccccHHHHHHHHccccccccccccccccccccHHHHHHHccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccHHHHHHHccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccEccccHHHHHcccccccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHcccccEEccccccEEccHHHHHHHHHHHcccccccEccHccccccccc
Coil and Loop (DISEMBL)
mklddmdsvltndpveNASKILALCMRKETEAQQKSLACnicsmvfcdeiVLNKHveehstlgkfTCTVCKKVFNNIkslkthsrihtgekpfrcsvcgksfsqrgiLSSHLavhagvkphickqcghaftqKSQLRLHEMRHgnirhfacnvcpfkfttksdlqrhqrshegvkpfrceycdktFTRQIIMKEHLnrhkgvqpyscshcdktffdaqslnkhklshktsadpissakgsklfggig
Flexible Loop (DISEMBL)
mklddmdsvltndpvenASKILALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNikslkthsrihtgekpfRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDlqrhqrshegvkpfrceyCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKlshktsadpissakgsklfggig
Low Complexity Region (SEG)
MKLDDMDSVLTNDPVENASKILALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLFGGIG
Disordered region (IsUnstruct)
*******************KILALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDL*******EGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDA******************************
Disordered Region (DISOPRED)
*K*DDMDSVLTNDPVENASKILALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLFG***
Disordered Region (DISEMBL)
MKLDDMDSVLTNDPVENASKILALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTT************GVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNK**************AKGSKLFGGIG
Disordered Region (DISPRO)
****DMDSVLTNDPVENASKILALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKLDDMDSVLTNDPVENASKILALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLFGGIG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	247	2.2.26 [Sep-21-2011]
Q8K2R5	619	Zinc finger protein 668 O	yes	N/A	0.647	0.258	0.422	7e-42
Q2TA17	619	Zinc finger protein 668 O	yes	N/A	0.647	0.258	0.417	3e-41
Q4R3I5	619	Zinc finger protein 668 O	N/A	N/A	0.732	0.292	0.417	4e-41
Q96K58	619	Zinc finger protein 668 O	yes	N/A	0.732	0.292	0.417	6e-41
Q9UK10	706	Zinc finger protein 225 O	no	N/A	0.906	0.317	0.386	2e-39
Q5R5S6	660	Zinc finger protein 540 O	no	N/A	0.894	0.334	0.382	3e-39
Q8NDQ6	660	Zinc finger protein 540 O	no	N/A	0.894	0.334	0.382	4e-39
Q06730	810	Zinc finger protein 33A O	no	N/A	0.890	0.271	0.389	5e-39
Q12901	538	Zinc finger protein 155 O	no	N/A	0.919	0.421	0.368	3e-38
P18749	453	Oocyte zinc finger protei	N/A	N/A	0.890	0.485	0.371	3e-38

>sp|Q8K2R5|ZN668_MOUSE Zinc finger protein 668 OS=Mus musculus GN=Znf668 PE=2 SV=1

 Score =  170 bits (431), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 107/194 (55%)

Query: 34  QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
           ++  AC  C   F D  V  KH   H+ L  ++C  C K +  +K L+ H R HTGE+PF
Sbjct: 165 ERPYACPDCGKSFADPSVFRKHRRTHAGLRPYSCERCGKAYAELKDLRNHERSHTGERPF 224

Query: 94  RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV 153
            CS CGKSFS+   L+ H  +HA  KP+ C  CG  FTQ S  + HE  H   + F C  
Sbjct: 225 LCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEKPFLCPR 284

Query: 154 CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT 213
           C   F+  S  +RHQR+HEGVKP+RCE C K F +   +  H   H G +P+ C  CDKT
Sbjct: 285 CGRMFSDPSSFRRHQRAHEGVKPYRCEKCGKDFRQPADLAMHRRVHTGDRPFKCLQCDKT 344

Query: 214 FFDAQSLNKHKLSH 227
           F  +  L +H L H
Sbjct: 345 FVASWDLKRHALVH 358

May be involved in transcriptional regulation.
Mus musculus (taxid: 10090)

>sp|Q2TA17|ZN668_BOVIN Zinc finger protein 668 OS=Bos taurus GN=ZNF668 PE=2 SV=2

 Score =  168 bits (426), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 81/194 (41%), Positives = 106/194 (54%)

Query: 34  QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
           ++   C  C   F D  V  KH   H+ L  ++C  C K +  +K L+ H R HTGE+PF
Sbjct: 165 ERPYTCADCGKSFADPSVFRKHRRTHAGLRPYSCERCGKAYAELKDLRNHERSHTGERPF 224

Query: 94  RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV 153
            CS CGKSFS+   L+ H  +HA  KP+ C  CG  FTQ S  + HE  H   + F C  
Sbjct: 225 LCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEKPFLCPR 284

Query: 154 CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT 213
           C   F+  S  +RHQR+HEGVKP+RCE C K F +   +  H   H G +P+ C  CDKT
Sbjct: 285 CGRMFSDPSSFRRHQRAHEGVKPYRCEKCGKDFRQPADLAMHRRVHTGDRPFKCLQCDKT 344

Query: 214 FFDAQSLNKHKLSH 227
           F  +  L +H L H
Sbjct: 345 FVASWDLKRHALVH 358

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

>sp|Q4R3I5|ZN668_MACFA Zinc finger protein 668 OS=Macaca fascicularis GN=ZNF668 PE=2 SV=1

 Score =  167 bits (424), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 81/194 (41%), Positives = 106/194 (54%)

Query: 34  QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
           ++  AC  C   F D  V  KH   H+ L  ++C  C K +  +K L+ H R HTGE+PF
Sbjct: 165 ERPYACADCGKSFADPSVFRKHRRTHAGLRPYSCERCGKAYAELKDLRNHERSHTGERPF 224

Query: 94  RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV 153
            CS CGKSFS+   L+ H  +HA  KP+ C  CG  FTQ S  + HE  H   + F C  
Sbjct: 225 LCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEKPFLCPR 284

Query: 154 CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT 213
           C   F+  S  +RHQR+HEGVKP+ CE C K F +   +  H   H G +P+ C  CDKT
Sbjct: 285 CGRMFSDPSSFRRHQRAHEGVKPYHCEKCGKDFRQPADLAMHRRVHTGDRPFKCLQCDKT 344

Query: 214 FFDAQSLNKHKLSH 227
           F  +  L +H L H
Sbjct: 345 FVASWDLKRHALVH 358

May be involved in transcriptional regulation.

Macaca fascicularis (taxid: 9541)

>sp|Q96K58|ZN668_HUMAN Zinc finger protein 668 OS=Homo sapiens GN=ZNF668 PE=1 SV=3

 Score =  167 bits (424), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 81/194 (41%), Positives = 106/194 (54%)

Query: 34  QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
           ++  AC  C   F D  V  KH   H+ L  ++C  C K +  +K L+ H R HTGE+PF
Sbjct: 165 ERPYACADCGKSFADPSVFRKHRRTHAGLRPYSCERCGKAYAELKDLRNHERSHTGERPF 224

Query: 94  RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV 153
            CS CGKSFS+   L+ H  +HA  KP+ C  CG  FTQ S  + HE  H   + F C  
Sbjct: 225 LCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEKPFLCPR 284

Query: 154 CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT 213
           C   F+  S  +RHQR+HEGVKP+ CE C K F +   +  H   H G +P+ C  CDKT
Sbjct: 285 CGRMFSDPSSFRRHQRAHEGVKPYHCEKCGKDFRQPADLAMHRRVHTGDRPFKCLQCDKT 344

Query: 214 FFDAQSLNKHKLSH 227
           F  +  L +H L H
Sbjct: 345 FVASWDLKRHALVH 358

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9UK10|ZN225_HUMAN Zinc finger protein 225 OS=Homo sapiens GN=ZNF225 PE=2 SV=2

 Score =  162 bits (411), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 121/225 (53%), Gaps = 1/225 (0%)

Query: 19  SKILALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIK 78
           S +  L + ++ ++++KS  C+ C   FC    L  H   H     + C VC K FN   
Sbjct: 158 SDVSVLDLHQQLQSREKSHTCDECGKSFCYSSALRIHQRVHMGEKLYNCDVCGKEFNQSS 217

Query: 79  SLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRL 138
            L+ H RIHTGEKPF+C  CGK FS+R  L  H  +H GVKPHIC++CG AF   SQL+ 
Sbjct: 218 HLQIHQRIHTGEKPFKCEQCGKGFSRRSGLYVHRKLHTGVKPHICEKCGKAFIHDSQLQE 277

Query: 139 HEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNR 198
           H+  H   + F C++C   F ++++L RH   H   KPFRC+ C K+F  +  +  H   
Sbjct: 278 HQRIHTGEKPFKCDICCKSFRSRANLNRHSMVHMREKPFRCDTCGKSFGLKSALNSHRMV 337

Query: 199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF 243
           H G + Y C  C K F   Q L KH++ H T   P +  +  K F
Sbjct: 338 HTGEKRYKCEECGKRFIYRQDLYKHQIDH-TGEKPYNCKECGKSF 381

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5R5S6|ZN540_PONAB Zinc finger protein 540 OS=Pongo abelii GN=ZNF540 PE=2 SV=1

 Score =  161 bits (408), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 85/222 (38%), Positives = 118/222 (53%), Gaps = 1/222 (0%)

Query: 22  LALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLK 81
             L   + T A +K   C  C   F     LN+H   H+ +  F C VC+K F+    L+
Sbjct: 368 FYLTEHRRTHAGKKPYECKECGKSFNVRGQLNRHKAIHTGIKPFACKVCEKAFSYSGDLR 427

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEM 141
            HSRIHTGEKP+ C  CGK+F  R +L+ H  +H GVKP+ CK+CG  F  +SQ+ LH+ 
Sbjct: 428 VHSRIHTGEKPYECKECGKAFMLRSVLTEHQRLHTGVKPYECKECGKTFRVRSQISLHKK 487

Query: 142 RHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG 201
            H +++ + C  C   F     L  HQR H G KP++C+ C K F R+  +KEHL  H G
Sbjct: 488 IHTDVKPYKCVRCGKTFRFGFYLTEHQRIHTGEKPYKCKECGKAFIRRGNLKEHLKIHSG 547

Query: 202 VQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF 243
           ++PY C  C K+F       +H+  H T   P    +  K F
Sbjct: 548 LKPYDCKECGKSFSRRGQFTEHQKIH-TGVKPYKCKECGKAF 588

May act as a transcriptional repressor.

Pongo abelii (taxid: 9601)

>sp|Q8NDQ6|ZN540_HUMAN Zinc finger protein 540 OS=Homo sapiens GN=ZNF540 PE=1 SV=1

 Score =  161 bits (408), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 85/222 (38%), Positives = 118/222 (53%), Gaps = 1/222 (0%)

Query: 22  LALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLK 81
             L   + T A +K   C  C   F     LN+H   H+ +  F C VC+K F+    L+
Sbjct: 368 FYLTEHRRTHAGKKPYECKECGKSFNVRGQLNRHKTIHTGIKPFACKVCEKAFSYSGDLR 427

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEM 141
            HSRIHTGEKP+ C  CGK+F  R +L+ H  +H GVKP+ CK+CG  F  +SQ+ LH+ 
Sbjct: 428 VHSRIHTGEKPYECKECGKAFMLRSVLTEHQRLHTGVKPYECKECGKTFRVRSQISLHKK 487

Query: 142 RHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG 201
            H +++ + C  C   F     L  HQR H G KP++C+ C K F R+  +KEHL  H G
Sbjct: 488 IHTDVKPYKCVRCGKTFRFGFYLTEHQRIHTGEKPYKCKECGKAFIRRGNLKEHLKIHSG 547

Query: 202 VQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF 243
           ++PY C  C K+F       +H+  H T   P    +  K F
Sbjct: 548 LKPYDCKECGKSFSRRGQFTEHQKIH-TGVKPYKCKECGKAF 588

May act as a transcriptional repressor.

Homo sapiens (taxid: 9606)

>sp|Q06730|ZN33A_HUMAN Zinc finger protein 33A OS=Homo sapiens GN=ZNF33A PE=1 SV=3

 Score =  161 bits (407), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 111/221 (50%), Gaps = 1/221 (0%)

Query: 23  ALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKT 82
           AL + + T   +K   CN C   FC +  L KH   H+ L  + C  C K F     LK 
Sbjct: 398 ALTLHQRTHTGEKPYQCNACGKTFCQKSDLTKHQRTHTGLKPYECYECGKSFRVTSHLKV 457

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMR 142
           H R HTGEKPF C  CGKSFS++  L+ H  +H G K + C  CG  F  KS L  H++ 
Sbjct: 458 HQRTHTGEKPFECLECGKSFSEKSNLTQHQRIHIGDKSYECNACGKTFYHKSLLTRHQII 517

Query: 143 HGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV 202
           H   + + C  C   F  KSDL  HQR+H G KPF C  C K F+ +  + +H   H G 
Sbjct: 518 HTGWKPYECYECGKTFCLKSDLTVHQRTHTGQKPFACPECGKFFSHKSTLSQHYRTHTGE 577

Query: 203 QPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF 243
           +PY C  C K F++   L KH  +H T   P    +  K F
Sbjct: 578 KPYECHECGKIFYNKSYLTKHNRTH-TGEKPYECNECGKAF 617

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q12901|ZN155_HUMAN Zinc finger protein 155 OS=Homo sapiens GN=ZNF155 PE=2 SV=4

 Score =  159 bits (401), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 121/228 (53%), Gaps = 1/228 (0%)

Query: 16  ENASKILALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFN 75
           ++ S +    + ++  +++KS  C+ C    C    L+ H   H     F C VC K F+
Sbjct: 155 QSISDVPIFDLPQQLYSEEKSYTCDECGKSICYISALHVHQRVHVGEKLFMCDVCGKEFS 214

Query: 76  NIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQ 135
               L+TH R+HTGEKPF+C  CGK FS+R  L+ H  +H G KP+IC+ CG AF   SQ
Sbjct: 215 QSSHLQTHQRVHTGEKPFKCEQCGKGFSRRSALNVHRKLHTGEKPYICEACGKAFIHDSQ 274

Query: 136 LRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEH 195
           L+ H+  H   + F C++C   F  +S L+ H   H G KPFRC+ CDK+F ++  +  H
Sbjct: 275 LKEHKRIHTGEKPFKCDICGKTFYFRSRLKSHSMVHTGEKPFRCDTCDKSFHQRSALNRH 334

Query: 196 LNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF 243
              H G +PY C  C K F       KH++ H T   P +  +  K F
Sbjct: 335 CMVHTGEKPYRCEQCGKGFIGRLDFYKHQVVH-TGEKPYNCKECGKSF 381

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P18749|ZO6_XENLA Oocyte zinc finger protein XlCOF6 (Fragment) OS=Xenopus laevis PE=3 SV=1

 Score =  158 bits (400), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 123/221 (55%), Gaps = 1/221 (0%)

Query: 23  ALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKT 82
           AL    +T   +K  AC  C   F ++ +L KH   H+    FTCT C K ++ + +L+ 
Sbjct: 165 ALKYHHKTHTGEKPFACTECGKSFTEKSILQKHQRTHTGEKPFTCTECGKSYSAMSTLEC 224

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMR 142
           H R HTGEKPF C+ CGKSF+++ IL  H   H G KP  C +CG + T+KS LR H++ 
Sbjct: 225 HRRTHTGEKPFTCTECGKSFTEKSILRKHHKTHTGEKPFTCTECGKSCTEKSILRKHQIT 284

Query: 143 HGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV 202
           H   + F C  C   F+ K+ L+ H ++H G KPF C  C K+FT + I++ H   H G 
Sbjct: 285 HTGEKPFTCTECGKCFSDKTALKYHHKTHTGEKPFACTECGKSFTDKSILRNHQRTHTGE 344

Query: 203 QPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF 243
           +P++C+ C K++    +L   + +H T   P +  +  K F
Sbjct: 345 KPFTCTECGKSYSAMSTLKSDRRTH-TGEKPFTCTECGKSF 384

May be involved in transcriptional regulation.

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	247
344294254	552	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.591	0.264	0.427	8e-41
395514932	811	PREDICTED: zinc finger protein 668 [Sarc	0.821	0.250	0.397	1e-40
44890292	438	LOC100045488 protein [Mus musculus]	0.979	0.552	0.376	1e-40
348542882	957	PREDICTED: hypothetical protein LOC10069	0.781	0.201	0.430	2e-40
348543788	502	PREDICTED: zinc finger protein 99-like [	0.736	0.362	0.419	2e-40
328726418	484	PREDICTED: zinc finger protein 271-like	0.825	0.421	0.390	3e-40
354497851	620	PREDICTED: zinc finger protein 668 [Cric	0.647	0.258	0.422	4e-40
157820439	619	zinc finger protein 668 [Rattus norvegic	0.611	0.243	0.422	4e-40
74143804	619	unnamed protein product [Mus musculus]	0.647	0.258	0.422	4e-40
345801513	678	PREDICTED: zinc finger protein 668 [Cani	0.732	0.266	0.422	4e-40

>gi|344294254|ref|XP_003418833.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 668-like [Loxodonta africana]

 Score =  172 bits (437), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 83/194 (42%), Positives = 107/194 (55%)

Query: 34  QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
           ++  AC  C   F D  V  KH   H+ L  ++C  C K +  +K L+ H R HTGE+PF
Sbjct: 202 ERPYACADCGKSFADPSVFRKHRRTHAGLRPYSCERCGKAYAELKDLRNHERSHTGERPF 261

Query: 94  RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV 153
            CS CGKSFS+   L+ H  +HA  KP+ C  CG  FTQ S  + HE  H   + F C  
Sbjct: 262 LCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEKPFLCPR 321

Query: 154 CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT 213
           C   F+  S  +RHQR+HEGVKP+RCE C K F +   +  H   H G +PY C  CDKT
Sbjct: 322 CGRMFSDPSSFRRHQRAHEGVKPYRCEKCGKDFRQPADLAMHRRVHTGDRPYKCVQCDKT 381

Query: 214 FFDAQSLNKHKLSH 227
           F  +  L +H L H
Sbjct: 382 FVASWDLKRHALVH 395

Source: Loxodonta africana

Species: Loxodonta africana

Genus: Loxodonta

Family: Elephantidae

Order: Proboscidea

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395514932|ref|XP_003761664.1| PREDICTED: zinc finger protein 668 [Sarcophilus harrisii]

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 81/204 (39%), Positives = 110/204 (53%)

Query: 24  LCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTH 83
           L + +     ++  +C  C   F D  V  KH   H+ L  + C  C K +  +K L+ H
Sbjct: 340 LKIHQRCHTGERPYSCADCGKCFADPSVFRKHRRTHAGLRPYGCPRCGKAYAELKDLRNH 399

Query: 84  SRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
            R HTGE+PF CS CGKSFS+   L+ H  +HA  KP+ C  CG  FTQ S  + HE  H
Sbjct: 400 ERSHTGERPFLCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTH 459

Query: 144 GNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQ 203
              + F C  C   F+  S  +RHQR+HEGVKP+RC+ C+K F +   +  H   H G +
Sbjct: 460 SGEKPFLCPRCGRMFSDPSSFRRHQRAHEGVKPYRCDKCNKDFRQPADLAMHRRVHTGDR 519

Query: 204 PYSCSHCDKTFFDAQSLNKHKLSH 227
           P+ C  CDKTF  +  L +H L H
Sbjct: 520 PFKCPQCDKTFVASWDLKRHALVH 543

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|44890292|gb|AAH66874.1| LOC100045488 protein [Mus musculus]

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/247 (37%), Positives = 132/247 (53%), Gaps = 5/247 (2%)

Query: 1   MKLDDMDSVLTNDPVENASKILA----LCMRKETEAQQKSLACNICSMVFCDEIVLNKHV 56
            KL+   +   N  V   SK+LA    L   K T+ ++K   CN C   F     L  H 
Sbjct: 91  QKLERNQTGDKNSEVFQHSKVLACQSTLQRNKRTDTREKPYKCNECDKAFLKLKYLRVHE 150

Query: 57  EEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHA 116
             HS    + C  C K F ++  L+ H R HTGEKP++C+ CGK+F+QR  L SH  VH 
Sbjct: 151 RTHSGKKPYECNQCGKAFLHLNYLRIHERTHTGEKPYQCNQCGKAFTQRSHLQSHKVVHT 210

Query: 117 GVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKP 176
           GV+P+IC QC  A+ Q++ LR HE  H   + + CN C   F+ +S+L+ H+++H G KP
Sbjct: 211 GVRPYICNQCNKAYPQQNYLRKHERTHTGEKPYICNQCNKAFSHQSNLRIHEKTHTGEKP 270

Query: 177 FRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS 236
           ++C  CDK F+ Q  +  H   H G +PY C+ CDK F   + L  H+ +H T   P   
Sbjct: 271 YKCNQCDKAFSHQSNLHIHERTHTGEKPYKCNQCDKAFAHLKYLRAHERTH-TQEKPYKC 329

Query: 237 AKGSKLF 243
            +  K F
Sbjct: 330 NQCGKAF 336

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348542882|ref|XP_003458913.1| PREDICTED: hypothetical protein LOC100699620 [Oreochromis niloticus]

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 83/193 (43%), Positives = 115/193 (59%)

Query: 35  KSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFR 94
           K  +C++C   F     L  H   HS +  ++C +C K F    SLK H  IH+G KP+ 
Sbjct: 45  KPYSCDLCGKSFNRAGNLKTHQLIHSGVKPYSCDLCGKSFTKAGSLKAHQLIHSGVKPYS 104

Query: 95  CSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVC 154
           C  CGKSF+    L +H   H+GVKP+ C+ CG +FTQ   L+ H++ H  ++ ++C++C
Sbjct: 105 CDECGKSFTLAQSLKTHQVFHSGVKPYSCELCGKSFTQAGNLKTHQLIHSGVKPYSCDLC 164

Query: 155 PFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTF 214
              FT  +DL+RHQ  H GVKP+ CE+C K+FTR   +K H   H GV+PYSC  C K F
Sbjct: 165 GKSFTQTTDLKRHQLIHSGVKPYSCEFCGKSFTRAQSLKTHQVLHSGVKPYSCGLCGKDF 224

Query: 215 FDAQSLNKHKLSH 227
             AQSL  H+L H
Sbjct: 225 THAQSLKIHQLIH 237

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348543788|ref|XP_003459364.1| PREDICTED: zinc finger protein 99-like [Oreochromis niloticus]

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 117/193 (60%)

Query: 35  KSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFR 94
           K  +C +C   F     L KH   HS +  ++C +C K F   +SLKTH  IH+G KP+ 
Sbjct: 111 KPYSCKLCGKSFTQAGGLKKHQLIHSGVKPYSCDLCGKSFTQAQSLKTHQLIHSGVKPYS 170

Query: 95  CSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVC 154
           C +CGKSF+    L +H  +H+GVKP+ CK CG +FTQ   L+ H++ H  ++ ++C++C
Sbjct: 171 CDLCGKSFTVAQSLKTHQLIHSGVKPYSCKLCGKSFTQAGGLKTHQLIHSGVKPYSCDMC 230

Query: 155 PFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTF 214
              FT    L++HQ  H G KP+ CE+C K+FT    +K+H   H GV+PYSC  C K+F
Sbjct: 231 GKSFTEAGSLKKHQLIHSGFKPYSCEFCGKSFTEAGGLKKHQLIHSGVKPYSCDLCGKSF 290

Query: 215 FDAQSLNKHKLSH 227
             AQ+L  H+L H
Sbjct: 291 TVAQNLKTHQLIH 303

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328726418|ref|XP_003248889.1| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 112/205 (54%)

Query: 23  ALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKT 82
            L   + T   +K   C++C   F     L KH   H+    + C VC+K F +  +L  
Sbjct: 143 TLTKHRRTHTGEKPYPCDVCDKTFGSSSTLTKHRRTHTGEKPYPCDVCEKTFGSSSNLTK 202

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMR 142
           H R HTGEKP+ C VC KSFSQ+ IL +H+  H G KP+ C  C  +F+Q+  L  H   
Sbjct: 203 HRRTHTGEKPYPCDVCDKSFSQKSILENHIRTHTGEKPYSCDLCDKSFSQRGTLEYHLRT 262

Query: 143 HGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV 202
           H   + + C+VC   F + S L +H+R+H G KP+ C+ CDKTF     + EH   H G 
Sbjct: 263 HTGEKPYPCDVCEKTFGSSSTLTKHRRTHTGEKPYPCDVCDKTFGSSSTLTEHRRTHTGE 322

Query: 203 QPYSCSHCDKTFFDAQSLNKHKLSH 227
           +PY C  CDKTF  + +L KH+ +H
Sbjct: 323 KPYPCDVCDKTFGSSSTLTKHRRTH 347

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|354497851|ref|XP_003511031.1| PREDICTED: zinc finger protein 668 [Cricetulus griseus] gi|344247137|gb|EGW03241.1| Zinc finger protein 668 [Cricetulus griseus]

 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 107/194 (55%)

Query: 34  QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
           ++  AC  C   F D  V  KH   H+ L  ++C  C K +  +K L+ H R HTGE+PF
Sbjct: 165 ERPYACTDCGKSFADPSVFRKHRRTHAGLRPYSCERCGKAYAELKDLRNHERSHTGERPF 224

Query: 94  RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV 153
            CS CGKSFS+   L+ H  +HA  KP+ C  CG  FTQ S  + HE  H   + F C  
Sbjct: 225 LCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEKPFLCPR 284

Query: 154 CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT 213
           C   F+  S  +RHQR+HEGVKP+RCE C K F +   +  H   H G +P+ C  CDKT
Sbjct: 285 CGRMFSDPSSFRRHQRAHEGVKPYRCEKCGKDFRQPADLAMHRRVHTGDRPFKCLQCDKT 344

Query: 214 FFDAQSLNKHKLSH 227
           F  +  L +H L H
Sbjct: 345 FVASWDLKRHALVH 358

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|157820439|ref|NP_001101023.1| zinc finger protein 668 [Rattus norvegicus] gi|149067670|gb|EDM17222.1| zinc finger protein 668 (predicted), isoform CRA_a [Rattus norvegicus] gi|149067671|gb|EDM17223.1| zinc finger protein 668 (predicted), isoform CRA_a [Rattus norvegicus]

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 107/194 (55%)

Query: 34  QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
           ++  AC  C   F D  V  KH   H+ L  ++C  C K +  +K L+ H R HTGE+PF
Sbjct: 165 ERPYACTDCGKSFADPSVFRKHRRTHAGLRPYSCERCGKAYAELKDLRNHERSHTGERPF 224

Query: 94  RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV 153
            CS CGKSFS+   L+ H  +HA  KP+ C  CG  FTQ S  + HE  H   + F C  
Sbjct: 225 LCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEKPFLCPR 284

Query: 154 CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT 213
           C   F+  S  +RHQR+HEGVKP+RCE C K F +   +  H   H G +P+ C  CDKT
Sbjct: 285 CGRMFSDPSSFRRHQRAHEGVKPYRCEKCGKDFRQPADLAMHRRVHTGDRPFKCLQCDKT 344

Query: 214 FFDAQSLNKHKLSH 227
           F  +  L +H L H
Sbjct: 345 FVASWDLKRHALVH 358

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|74143804|dbj|BAE41226.1| unnamed protein product [Mus musculus]

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 107/194 (55%)

Query: 34  QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
           ++  AC  C   F D  V  KH   H+ L  ++C  C K +  +K L+ H R HTGE+PF
Sbjct: 165 ERPYACPDCGKSFADPSVFRKHRRTHAGLRPYSCERCGKAYAELKDLRNHERSHTGERPF 224

Query: 94  RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV 153
            CS CGKSFS+   L+ H  +HA  KP+ C  CG  FTQ S  + HE  H   + F C  
Sbjct: 225 LCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEKPFLCPR 284

Query: 154 CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT 213
           C   F+  S  +RHQR+HEGVKP+RCE C K F +   +  H   H G +P+ C  CDKT
Sbjct: 285 CGRMFSDPSSFRRHQRAHEGVKPYRCEKCGKDFRQPADLAMHRRVHTGDRPFKCLQCDKT 344

Query: 214 FFDAQSLNKHKLSH 227
           F  +  L +H L H
Sbjct: 345 FVASWDLKRHALVH 358

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|345801513|ref|XP_547040.3| PREDICTED: zinc finger protein 668 [Canis lupus familiaris]

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 107/194 (55%)

Query: 34  QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
           ++  AC  C   F D  V  KH   H+ L  ++C  C K +  +K L+ H R HTGE+PF
Sbjct: 224 ERPYACADCGKSFADPSVFRKHRRTHAGLRPYSCERCGKAYAELKDLRNHERSHTGERPF 283

Query: 94  RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV 153
            CS CGKSFS+   L+ H  +HA  KP+ C  CG  FTQ S  + HE  H   + F C  
Sbjct: 284 LCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEKPFLCPR 343

Query: 154 CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT 213
           C   F+  S  +RHQR+HEGVKP+RCE C K F +   +  H   H G +P+ C  CDKT
Sbjct: 344 CGRMFSDPSSFRRHQRAHEGVKPYRCEKCGKDFRQPADLAMHRRVHTGDRPFKCLQCDKT 403

Query: 214 FFDAQSLNKHKLSH 227
           F  +  L +H L H
Sbjct: 404 FVASWDLKRHALVH 417

Source: Canis lupus familiaris

Species: Canis lupus

Genus: Canis

Family: Canidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	247
ZFIN|ZDB-GENE-050306-3	309	zgc:113407 "zgc:113407" [Danio	0.846	0.676	0.414	6.2e-46
ZFIN|ZDB-GENE-110913-123	429	si:dkey-14o6.4 "si:dkey-14o6.4	0.785	0.452	0.443	1.3e-45
ZFIN|ZDB-GENE-110914-70	392	si:ch211-234c11.2 "si:ch211-23	0.769	0.484	0.447	3.4e-45
ZFIN|ZDB-GENE-110914-64	369	si:dkey-40n15.1 "si:dkey-40n15	0.866	0.579	0.413	7.1e-45
ZFIN|ZDB-GENE-080516-3	394	zgc:174624 "zgc:174624" [Danio	0.906	0.568	0.382	1.5e-44
ZFIN|ZDB-GENE-050320-62	394	zgc:113100 "zgc:113100" [Danio	0.906	0.568	0.382	2.4e-44
ZFIN|ZDB-GENE-110914-41	573	si:dkey-233e3.3 "si:dkey-233e3	0.862	0.371	0.411	3.1e-44
ZFIN|ZDB-GENE-110913-133	485	si:dkey-222o15.5 "si:dkey-222o	0.919	0.468	0.405	5e-44
ZFIN|ZDB-GENE-120709-10	377	si:dkey-285e18.8 "si:dkey-285e	0.842	0.551	0.411	5e-44
ZFIN|ZDB-GENE-110913-92	548	si:ch211-271g18.3 "si:ch211-27	0.846	0.381	0.404	8.1e-44

ZFIN|ZDB-GENE-050306-3 zgc:113407 "zgc:113407" [Danio rerio (taxid:7955)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 87/210 (41%), Positives = 118/210 (56%)

Query:    24 LCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTH 83
             L +  +  + +K   C  C   F     LN+H++ H+    FTCT C K F    SL  H
Sbjct:    99 LSLHMQMHSGEKPFRCIQCGKSFSQSSHLNEHMKIHTGEKPFTCTQCGKNFRQSSSLNLH 158

Query:    84 SRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
              +IHTGEKP+ C+ CGKSFS+   L+ H+ +H G KP  C QCG +F+  SQL  H   H
Sbjct:   159 RKIHTGEKPYTCTQCGKSFSRSSTLNEHMRIHTGEKPFTCTQCGRSFSGSSQLNQHMKIH 218

Query:   144 GNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQ 203
               +R + C  C   F T  D++RHQR H G KP++C +CDK F + + +K H   H G +
Sbjct:   219 TGVREYICFECEKTFITAGDMKRHQRIHTGEKPYKCAHCDKRFNQSVNLKAHEMIHSGKK 278

Query:   204 PYSCSHCDKTFFDAQSLNKHKLSHKTSADP 233
             P  CSHCDK F D ++L KH+  H T   P
Sbjct:   279 PCKCSHCDKKFRDLRTLKKHERIH-TGETP 307

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-123 si:dkey-14o6.4 "si:dkey-14o6.4" [Danio rerio (taxid:7955)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 86/194 (44%), Positives = 113/194 (58%)

Query:    34 QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
             +K   C  C   F +   LN+H+  H+    FTCT C K FN   SL  H RIHTGEKPF
Sbjct:   231 EKPFTCPQCGKSFINSSHLNQHIMIHTGEKPFTCTQCGKSFNCSSSLNKHMRIHTGEKPF 290

Query:    94 RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV 153
              C+ CGKSFSQ   L+ H+ +H G KP  C QCG +F+Q S L+ H   H +++ + C  
Sbjct:   291 TCTQCGKSFSQSSSLNQHIMIHTGKKPFTCTQCGKSFSQSSYLKNHMKIHTSVKEYVCLE 350

Query:   154 CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT 213
             C   F T ++L+RHQR H G KP++C +C K FT+   +K H   H G +PY CSHC K 
Sbjct:   351 CEKTFITAAELKRHQRIHTGEKPYKCSHCSKRFTQLGTLKTHERIHTGDKPYKCSHCSKR 410

Query:   214 FFDAQSLNKHKLSH 227
             F    +L KH+  H
Sbjct:   411 FTHTGTLKKHQRIH 424

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110914-70 si:ch211-234c11.2 "si:ch211-234c11.2" [Danio rerio (taxid:7955)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 85/190 (44%), Positives = 112/190 (58%)

Query:    34 QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
             +K   C  C   F +   LN+H+  H+    FTCT C K FN   SL  H RIHTGEKPF
Sbjct:   175 EKPFTCPQCGKSFINSSHLNQHIMIHTGEKPFTCTQCGKSFNCSSSLNKHMRIHTGEKPF 234

Query:    94 RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV 153
              C+ CGKSFSQ   L+ H+ +H G KP  C QCG +F+Q S L+ H   H +++ + C  
Sbjct:   235 TCTQCGKSFSQSSSLNQHIMIHTGKKPFTCTQCGKSFSQSSYLKNHMKIHTSVKEYVCLE 294

Query:   154 CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT 213
             C   F T ++L+RHQR H G KP++C +C K FT+   +K H   H G +PY CSHC K+
Sbjct:   295 CEKTFITVAELKRHQRIHTGEKPYKCSHCSKRFTQLGTLKTHERIHTGDKPYKCSHCSKS 354

Query:   214 FFDAQSLNKH 223
             F  +  L KH
Sbjct:   355 FTHSGQLKKH 364

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110914-64 si:dkey-40n15.1 "si:dkey-40n15.1" [Danio rerio (taxid:7955)]

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 89/215 (41%), Positives = 117/215 (54%)

Query:    33 QQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKP 92
             ++K   C  C   F     LN+H+  H+    FTCT C K F+N  +L  H RIHTGEKP
Sbjct:   142 REKLFTCTQCGKNFDQSSNLNQHMRIHTGEKPFTCTHCGKSFSNSANLNQHMRIHTGEKP 201

Query:    93 FRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACN 152
             F C+ CGKSFSQ   L+ H+ +H G KP  C QCG +F+Q S L LH   H   + F C 
Sbjct:   202 FTCTQCGKSFSQSSYLNQHMRIHTGEKPFTCSQCGKSFSQSSSLNLHMRIHTGEKPFTCT 261

Query:   153 VCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDK 212
              C   F+  S+L  H R+H G KPF C  C K+F+R   + +H+  H G + Y C  C+K
Sbjct:   262 QCGKSFSQSSNLNIHMRNHTGEKPFTCLQCGKSFSRSTSLNQHMMMHTGEKEYMCLKCEK 321

Query:   213 TFFDAQSLNKHKLSHKTSADPISSAKGSKLFGGIG 247
             TF  A  L +H+  H T   P   ++ SK F   G
Sbjct:   322 TFITAAKLKRHQRVH-TGEKPYKCSQCSKRFARSG 355

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-080516-3 zgc:174624 "zgc:174624" [Danio rerio (taxid:7955)]

 Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 86/225 (38%), Positives = 119/225 (52%)

Query:    19 SKILALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIK 78
             S++ AL    +    +K   C  C   F     LN H+  HS    FTCT+C   FN I 
Sbjct:   122 SQLSALNKHNKIHTGEKPFTCTQCGKSFSQSSSLNVHMRIHSGEKPFTCTLCGTSFNQIS 181

Query:    79 SLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRL 138
             +L  H +IHTGEKP  C+ CGK FSQ   L+ H+ +H G KP  C QCG +F+  S L+L
Sbjct:   182 ALNKHKKIHTGEKPHACTQCGKRFSQSSNLNQHMRIHTGEKPFTCTQCGKSFSHSSSLKL 241

Query:   139 HEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNR 198
             H M H   + F C  C   F+    L RH ++H G KPF C  C K+F++   +  H+  
Sbjct:   242 HMMIHTGEKSFTCTQCGMSFSQSPSLYRHLKTHTGEKPFICTQCGKSFSQSAHLNLHMKT 301

Query:   199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF 243
             H G +P++C+ C K+F  +  LNKH + H T   P+   +  K F
Sbjct:   302 HTGEKPFTCTQCGKSFNQSSDLNKHMIIH-TGEKPLICTQCGKSF 345

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-050320-62 zgc:113100 "zgc:113100" [Danio rerio (taxid:7955)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 86/225 (38%), Positives = 119/225 (52%)

Query:    19 SKILALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIK 78
             S++ AL    +    +K   C  C   F     LN H+  HS    FTCT+C   FN I 
Sbjct:   122 SQLSALNKHNKIHTGEKPFTCTQCGKSFSQSSSLNVHMRIHSGEKPFTCTLCGTSFNQIS 181

Query:    79 SLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRL 138
             +L  H +IHTGEKP  C+ CGK FSQ   L+ H+ +H G KP  C QCG +F+  S L+L
Sbjct:   182 ALNKHKKIHTGEKPHACTQCGKRFSQSSNLNQHMRIHTGEKPFTCTQCGKSFSHSSSLKL 241

Query:   139 HEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNR 198
             H M H   + F C  C   F+    L RH ++H G KPF C  C K+F++   +  H+  
Sbjct:   242 HMMIHTGEKSFTCTQCGMSFSQSPSLYRHLKTHTGEKPFICTQCGKSFSQSAHLNLHMKI 301

Query:   199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF 243
             H G +P++C+ C K+F  +  LNKH + H T   P+   +  K F
Sbjct:   302 HTGEKPFTCTQCGKSFNQSSDLNKHMIIH-TGEKPLICTQCGKSF 345

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110914-41 si:dkey-233e3.3 "si:dkey-233e3.3" [Danio rerio (taxid:7955)]

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 88/214 (41%), Positives = 114/214 (53%)

Query:    34 QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
             +K   C  C   F +   LN+H+  H+    FTCT C K F+    L  H RIHTGEKPF
Sbjct:   348 EKPFTCTQCGKSFSNSANLNQHMRIHTGEKPFTCTQCGKSFSQSSYLNIHMRIHTGEKPF 407

Query:    94 RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV 153
              C  CGKSFSQ   L+ H+ +H G KP  C QCG +F+Q S L LH   H   + F C  
Sbjct:   408 TCPQCGKSFSQSPYLNQHMRIHTGEKPFTCSQCGKSFSQSSSLNLHMRIHTGEKPFTCTQ 467

Query:   154 CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT 213
             C   F+  S+L  H R+H G KPF C  C K+F+R   + +H+  H G + Y C  C+KT
Sbjct:   468 CGKSFSQSSNLNIHMRNHTGEKPFTCLQCGKSFSRSTSLNQHMMMHTGEKEYMCLKCEKT 527

Query:   214 FFDAQSLNKHKLSHKTSADPISSAKGSKLFGGIG 247
             F  A  L +H+  H T   P   ++ SK F   G
Sbjct:   528 FITAAKLKRHQRVH-TGEKPYKCSQCSKRFARSG 560

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-133 si:dkey-222o15.5 "si:dkey-222o15.5" [Danio rerio (taxid:7955)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 94/232 (40%), Positives = 123/232 (53%)

Query:    17 NASKILALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNN 76
             N S IL + MR  T   +K   C  C   F     LN+H+  H+    FTCT C K F+N
Sbjct:   244 NKSSILNIHMRNHTG--EKPFTCLQCGKSFSQSTSLNQHMRIHTGEKLFTCTQCGKSFSN 301

Query:    77 IKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQL 136
               +L  H RIHTGEKPF CS CGKSFSQ   L+ H+ +H G KP  C QCG +F+Q   L
Sbjct:   302 SANLNQHMRIHTGEKPFTCSQCGKSFSQSSYLNIHMRIHTGEKPFTCPQCGKSFSQSPYL 361

Query:   137 RLHEMR-HGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEH 195
               H MR H   + F C  C   F+  S+L  H R+H G KPF C  C+K+F++   +  H
Sbjct:   362 N-HHMRIHTGEKPFTCTQCGKSFSQSSNLNIHMRNHSGEKPFTCTQCEKSFSQSTSLNRH 420

Query:   196 LNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLFGGIG 247
             +  H G + + C  C+KTF  A  L +H+  H T       ++ SK F   G
Sbjct:   421 MMIHTGEKEFMCLKCEKTFITAAELKRHQRVH-TGEKTYKCSQCSKRFARSG 471

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-120709-10 si:dkey-285e18.8 "si:dkey-285e18.8" [Danio rerio (taxid:7955)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 86/209 (41%), Positives = 114/209 (54%)

Query:    35 KSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFR 94
             K   C  C   F     LN+H+  H+    FTCT C K F++  +   H RIHTGEKPF 
Sbjct:   148 KPFTCTQCGKSFSQSSSLNRHMRIHTGEKPFTCTRCGKSFSHSSNFNRHMRIHTGEKPFT 207

Query:    95 CSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVC 154
             C+ C KSFSQ   L+ H+ +H G KP  C QCG +F+Q S L LH M H   + F C  C
Sbjct:   208 CTQCEKSFSQSSSLNHHMRIHTGEKPFTCTQCGKSFSQSSNLNLHMMIHTGEKPFTCTQC 267

Query:   155 PFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTF 214
                F+  S L  H R H G K F C  C K+F+R + +KEH+  H G +P++C+ C K+F
Sbjct:   268 GKSFSCSSYLNHHMRIHTGEKLFSCTQCGKSFSRSLSLKEHMRIHTGEKPFTCTQCGKSF 327

Query:   215 FDAQSLNKHKLSHKTSADPISSAKGSKLF 243
               + SLN H  +H T   P +  +  K F
Sbjct:   328 SQSSSLNHHMWTH-TGEKPFTCTQCGKSF 355

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-92 si:ch211-271g18.3 "si:ch211-271g18.3" [Danio rerio (taxid:7955)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 85/210 (40%), Positives = 112/210 (53%)

Query:    34 QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
             +K   C  C   F     LNKH++ H+    FTCT C K FN   SL  H +IHTGEKPF
Sbjct:    91 EKPFTCTQCGKSFNRSSSLNKHIKIHTGEKPFTCTQCGKSFNQSSSLNNHIKIHTGEKPF 150

Query:    94 RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV 153
              C+ CGKSF+Q   L++H+ +H G KP  C QCG +F Q S L LH   H   + F C  
Sbjct:   151 TCTQCGKSFNQSSSLNNHMKIHTGEKPFTCTQCGKSFNQSSYLNLHMRIHTGEKPFTCTQ 210

Query:   154 CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT 213
             C   F   S + +H + H G KPF C  C K+F R   +  H+  H G +P++C+ C K+
Sbjct:   211 CGRSFNRSSSINKHMKIHTGEKPFTCTQCLKSFNRSSHLNNHMKIHTGEKPFTCTQCGKS 270

Query:   214 FFDAQSLNKHKLSHKTSADPISSAKGSKLF 243
             F  +  LNKH   H T   P +  +  K F
Sbjct:   271 FSQSTYLNKHMRIH-TGEKPFTCTQCEKSF 299

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	247
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	6e-05
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	4e-04
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	4e-04

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 38.9 bits (91), Expect = 6e-05
 Identities = 17/26 (65%), Positives = 21/26 (80%)

Query: 79  SLKTHSRIHTGEKPFRCSVCGKSFSQ 104
           +L+ H R HTGEKP++C VCGKSFS 
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 36.6 bits (85), Expect = 4e-04
 Identities = 12/26 (46%), Positives = 19/26 (73%)

Query: 163 DLQRHQRSHEGVKPFRCEYCDKTFTR 188
           +L+RH R+H G KP++C  C K+F+ 
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 40.8 bits (95), Expect = 4e-04
 Identities = 43/189 (22%), Positives = 62/189 (32%), Gaps = 35/189 (18%)

Query: 64  KFTCTVCKKVFNNIKSLKTHSR--IHTGE--KPFRC--SVCGKSFSQRGILSSHLAVHAG 117
                 C   F+    L  H R   H+GE  KPF C  S+CGK FS+   L  H+ +H  
Sbjct: 289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTS 348

Query: 118 VKPHICK--QCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVK 175
           + P   K       F+        +                            +  +  K
Sbjct: 349 ISPAKEKLLNSSSKFSPLLNNEPPQSLQ-----------------------QYKDLKNDK 385

Query: 176 PFRCEY--CDKTFTRQIIMKEHLNRHKGVQPYSC--SHCDKTFFDAQSLNKHKLSHKTSA 231
                   C + F R   +  H+  H   +PY+C    C K+F    +L  HK  H   A
Sbjct: 386 KSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHA 445

Query: 232 DPISSAKGS 240
             + S   S
Sbjct: 446 PLLCSILKS 454

Length = 467

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	247
KOG2462|consensus	279		99.97
KOG2462|consensus	279		99.96
KOG1074|consensus	958		99.95
KOG3608|consensus	467		99.93
KOG3608|consensus	467		99.92
KOG3623|consensus	1007		99.92
KOG1074|consensus	958		99.9
KOG3623|consensus	1007		99.87
KOG3576|consensus	267		99.73
KOG3576|consensus	267		99.66
PLN03086	567	PRLI-interacting factor K; Provisional	99.43
PLN03086	567	PRLI-interacting factor K; Provisional	99.4
PHA00733	128	hypothetical protein	99.26
PHA00733	128	hypothetical protein	99.12
PHA02768	55	hypothetical protein; Provisional	99.09
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.89
PHA02768	55	hypothetical protein; Provisional	98.84
KOG3993|consensus	500		98.81
KOG3993|consensus	500		98.76
PHA00616	44	hypothetical protein	98.69
PHA00616	44	hypothetical protein	98.69
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.6
PHA00732	79	hypothetical protein	98.47
PHA00732	79	hypothetical protein	98.27
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.25
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.2
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.14
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.97
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.93
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.91
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.88
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.69
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.63
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.6
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.41
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.22
smart00355	26	ZnF_C2H2 zinc finger.	97.21
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.09
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.02
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.01
smart00355	26	ZnF_C2H2 zinc finger.	97.0
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.91
KOG1146|consensus	1406		96.87
PRK04860	160	hypothetical protein; Provisional	96.86
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.8
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.56
KOG1146|consensus	1406		96.2
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.16
PRK04860	160	hypothetical protein; Provisional	96.14
KOG2231|consensus	669		95.88
KOG2231|consensus	669		95.85
KOG2785|consensus	390		95.68
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.56
KOG2482|consensus	423		95.51
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.31
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.19
KOG2785|consensus	390		95.17
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	94.77
KOG4173|consensus	253		94.65
KOG2893|consensus	341		94.59
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.49
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.85
COG5048	467	FOG: Zn-finger [General function prediction only]	93.8
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.56
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	93.33
KOG2482|consensus	423		93.31
COG5048	467	FOG: Zn-finger [General function prediction only]	93.09
COG5236	493	Uncharacterized conserved protein, contains RING Z	92.71
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	92.59
KOG2893|consensus	341		92.38
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	92.35
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	92.06
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	89.54
PHA00626	59	hypothetical protein	89.48
COG4049	65	Uncharacterized protein containing archaeal-type C	89.24
COG4049	65	Uncharacterized protein containing archaeal-type C	88.03
KOG4173|consensus	253		87.63
smart00531	147	TFIIE Transcription initiation factor IIE.	87.58
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	87.5
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	87.38
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	86.76
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	86.68
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	86.56
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	86.0
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	85.79
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	85.68
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	85.43
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	85.31
KOG2186|consensus	276		85.13
COG1996	49	RPC10 DNA-directed RNA polymerase, subunit RPC10 (	85.04
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	84.7
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	84.62
PRK06266	178	transcription initiation factor E subunit alpha; V	84.13
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	83.24
KOG2807|consensus	378		82.76
PRK06266	178	transcription initiation factor E subunit alpha; V	82.75
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	82.35
PF08274	30	PhnA_Zn_Ribbon: PhnA Zinc-Ribbon ; InterPro: IPR01	82.1
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	81.58
KOG2593|consensus	436		81.57
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	80.96
COG1592	166	Rubrerythrin [Energy production and conversion]	80.9

>KOG2462|consensus

Probab=99.97  E-value=9.5e-32  Score=198.51  Aligned_cols=135  Identities=34%  Similarity=0.662  Sum_probs=125.2

Q ss_pred             CCeeCCCCCcccCChhHHHHHHHHhc---CCCCeecCcCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHH
Q psy2288          91 KPFRCSVCGKSFSQRGILSSHLAVHA---GVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRH  167 (247)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~~~---~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H  167 (247)
                      ..|.|+.|++.+.+..+|.+|.++|-   ..+.+.|.+|++.+.+...|.+|+++|.  -+.+|.+||+.|...+.|+.|
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             CceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcc
Confidence            35889999999999999999988774   3677899999999999999999999986  689999999999999999999


Q ss_pred             HHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhc
Q psy2288         168 QRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       168 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      +++|+|||||.|+.|+++|.++++|+.||++|.+.++|+|..|++.|..++-|.+|..+-
T Consensus       207 iRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  207 IRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             cccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhc
Confidence            999999999999999999999999999999999999999999999999999999998764

>KOG2462|consensus

Probab=99.96  E-value=1.6e-29  Score=186.74  Aligned_cols=134  Identities=29%  Similarity=0.640  Sum_probs=123.8

Q ss_pred             CceeccccccccCChHHHHHHHhhccC---CCCeeCCCCCcccCChhHHHHHHHHhcCCCCeecCcCcccccChhHHHHH
Q psy2288          63 GKFTCTVCKKVFNNIKSLKTHSRIHTG---EKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLH  139 (247)
Q Consensus        63 ~~~~C~~C~~~f~~~~~l~~H~~~~~~---~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h  139 (247)
                      ..|+|+.|++.+.+...|.+|.++|-.   .+.+.|++|++.+.+...|..|+++|+  .+++|.+||+.|...+.|.-|
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             CceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcc
Confidence            458999999999999999999988854   466889999999999999999999985  678999999999999999999


Q ss_pred             HHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHh
Q psy2288         140 EMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNR  198 (247)
Q Consensus       140 ~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  198 (247)
                      +++|++|+||.|+.|+++|++.++|+.|+++|.+.++|+|..|++.|...+.|.+|...
T Consensus       207 iRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  207 IRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             cccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            99999999999999999999999999999999999999999999999999999999765

>KOG1074|consensus

Probab=99.95  E-value=5.6e-29  Score=207.25  Aligned_cols=143  Identities=31%  Similarity=0.624  Sum_probs=125.2

Q ss_pred             eeCCCCCcccCChhHHHHHHHHhcCCCCeecCcCcccccChhHHHHHHHHhCCCC----ccccC---CCccccCChHHHH
Q psy2288          93 FRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIR----HFACN---VCPFKFTTKSDLQ  165 (247)
Q Consensus        93 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~----~~~C~---~C~~~~~~~~~l~  165 (247)
                      -.|-+|.+..+-.+.|+.|.++|++++||+|.+|++.|..+.+|+.|+..|....    .+.|+   +|.+.|.+.-.|.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lp  685 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLP  685 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccccc
Confidence            5899999999999999999999999999999999999999999999998876543    36688   8888888888888


Q ss_pred             HHHHHhCCC-CC--------------------------------------------------------------------
Q psy2288         166 RHQRSHEGV-KP--------------------------------------------------------------------  176 (247)
Q Consensus       166 ~H~~~h~~~-~~--------------------------------------------------------------------  176 (247)
                      .|+++|.+. .+                                                                    
T Consensus       686 QhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~~  765 (958)
T KOG1074|consen  686 QHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCGR  765 (958)
T ss_pred             ceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccccccc
Confidence            888776521 00                                                                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy2288         177 --------------------------------------------------------------------------------  176 (247)
Q Consensus       177 --------------------------------------------------------------------------------  176 (247)
                                                                                                      
T Consensus       766 ~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~~  845 (958)
T KOG1074|consen  766 ELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATKT  845 (958)
T ss_pred             ccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------cccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHH
Q psy2288         177 ----------------------------------FRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNK  222 (247)
Q Consensus       177 ----------------------------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  222 (247)
                                                        ..|.+|++.|...++|..|+++|++++||.|-+|++.|.++..|..
T Consensus       846 n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKv  925 (958)
T KOG1074|consen  846 NEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKV  925 (958)
T ss_pred             ccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhh
Confidence                                              6799999999999999999999999999999999999999999999


Q ss_pred             HHHhccCCCCCCC
Q psy2288         223 HKLSHKTSADPIS  235 (247)
Q Consensus       223 H~~~h~~~~~~~c  235 (247)
                      ||.+|+...++.=
T Consensus       926 HMgtH~w~q~~sr  938 (958)
T KOG1074|consen  926 HMGTHMWVQPPSR  938 (958)
T ss_pred             hhccccccCCCcc
Confidence            9999988766543

>KOG3608|consensus

Probab=99.93  E-value=3.7e-25  Score=168.25  Aligned_cols=215  Identities=25%  Similarity=0.491  Sum_probs=180.0

Q ss_pred             CcccchhHHHHHhhhhhhhh------------cCC-ceecc--cccccccCHHHHHHHHHHhCCCCceeccccccccCCh
Q psy2288          13 DPVENASKILALCMRKETEA------------QQK-SLACN--ICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNI   77 (247)
Q Consensus        13 ~~~~~~~~~~~l~~~~~~~~------------~~~-~~~C~--~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~   77 (247)
                      ++...|.+...+..|...|.            +++ .+.|.  -|-.++.+...|+.|++.|.+++...|+.|+..|.+.
T Consensus       141 dCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~  220 (467)
T KOG3608|consen  141 DCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTK  220 (467)
T ss_pred             hcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccc
Confidence            45555566655555554432            232 25565  4889999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcc--CCCCeeCCCCCcccCChhHHHHHHHHhcCCCCeecCcCcccccChhHHHHHHHH-hCCCCccccCCC
Q psy2288          78 KSLKTHSRIHT--GEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMR-HGNIRHFACNVC  154 (247)
Q Consensus        78 ~~l~~H~~~~~--~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~-~~~~~~~~C~~C  154 (247)
                      ..|-.|++.-+  ...+|.|..|.+.|..+..|..|+..|-  .-|+|+.|+-+....+.|..|++. |...+||+|..|
T Consensus       221 tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~C  298 (467)
T KOG3608|consen  221 TKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDEC  298 (467)
T ss_pred             cHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccch
Confidence            99999986533  3458999999999999999999999884  458999999999999999999984 778899999999


Q ss_pred             ccccCChHHHHHHHHHhCCCCCcccCc--CchhcccHHHHHHHHHhcC-CCC--CeecccccccccChHHHHHHHHhccC
Q psy2288         155 PFKFTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHK-GVQ--PYSCSHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       155 ~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-~~~--~~~C~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      ++.+.+.+.|.+|..+|. +-.|+|..  |..++.+..+|++|++.++ |..  +|.|-.|.+.|.+-.+|.+|+...|+
T Consensus       299 d~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  299 DTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             hhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhc
Confidence            999999999999999888 77799977  9999999999999997654 554  59999999999999999999866544


Q ss_pred             C
Q psy2288         230 S  230 (247)
Q Consensus       230 ~  230 (247)
                      =
T Consensus       378 f  378 (467)
T KOG3608|consen  378 F  378 (467)
T ss_pred             c
Confidence            3

>KOG3608|consensus

Probab=99.92  E-value=4.9e-25  Score=167.56  Aligned_cols=207  Identities=26%  Similarity=0.513  Sum_probs=182.1

Q ss_pred             eecc--cccccccCHHHHHHHHHHhCC-----------CC-c-eecc--ccccccCChHHHHHHHhhccCCCCeeCCCCC
Q psy2288          37 LACN--ICSMVFCDEIVLNKHVEEHST-----------LG-K-FTCT--VCKKVFNNIKSLKTHSRIHTGEKPFRCSVCG   99 (247)
Q Consensus        37 ~~C~--~C~~~~~~~~~l~~H~~~~~~-----------~~-~-~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~   99 (247)
                      +.|.  .|++.|.+...|..|+..|.-           ++ | +.|.  -|.+++.++..|++|++.|.+++...|+.|+
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg  214 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCG  214 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHH
Confidence            5565  599999999999999877631           11 2 4454  4899999999999999999999999999999


Q ss_pred             cccCChhHHHHHHHHhc--CCCCeecCcCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHH-hCCCCC
Q psy2288         100 KSFSQRGILSSHLAVHA--GVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRS-HEGVKP  176 (247)
Q Consensus       100 ~~f~~~~~l~~H~~~~~--~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~-h~~~~~  176 (247)
                      ..|++...|-.|++..+  ...+|.|..|.+.|..+..|..|+..|.  ..|+|+.|+-.....++|.+|++. |...+|
T Consensus       215 ~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkp  292 (467)
T KOG3608|consen  215 ELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKP  292 (467)
T ss_pred             HHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCC
Confidence            99999999999976543  4578999999999999999999999875  679999999999999999999875 677899


Q ss_pred             cccCcCchhcccHHHHHHHHHhcCCCCCeeccc--ccccccChHHHHHHHHhcc---CCCCCCCccccCCCcCCC
Q psy2288         177 FRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH--CDKTFFDAQSLNKHKLSHK---TSADPISSAKGSKLFGGI  246 (247)
Q Consensus       177 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~---~~~~~~c~~c~~~~~~~~  246 (247)
                      |+|..|.+.|.+.+.|.+|+.+|. +-.|+|..  |.++|.+..++.+|++.++   ++-+|.|..|+--+++|.
T Consensus       293 fKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~  366 (467)
T KOG3608|consen  293 FKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGK  366 (467)
T ss_pred             ccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccch
Confidence            999999999999999999999887 66799977  9999999999999998876   558899999988777774

>KOG3623|consensus

Probab=99.92  E-value=3.7e-26  Score=187.91  Aligned_cols=103  Identities=35%  Similarity=0.632  Sum_probs=74.5

Q ss_pred             CCCcccchhHHHHHhhhhhhhh--cCCceecccccccccCHHHHHHHHHHhCC-------------CCceeccccccccC
Q psy2288          11 TNDPVENASKILALCMRKETEA--QQKSLACNICSMVFCDEIVLNKHVEEHST-------------LGKFTCTVCKKVFN   75 (247)
Q Consensus        11 ~~~~~~~~~~~~~l~~~~~~~~--~~~~~~C~~C~~~~~~~~~l~~H~~~~~~-------------~~~~~C~~C~~~f~   75 (247)
                      +..++..+.....|.+|.+...  .+..+.|..|..+|.....|.+||.+|..             ...|+|..|++.|+
T Consensus       213 cpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFK  292 (1007)
T KOG3623|consen  213 CPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFK  292 (1007)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhh
Confidence            4455566666667777765432  34457788888888888888888877642             12478888888888


Q ss_pred             ChHHHHHHHhhccCCCCeeCCCCCcccCChhHHHHHHH
Q psy2288          76 NIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLA  113 (247)
Q Consensus        76 ~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  113 (247)
                      .+..|..|+++|.+++||.|+.|++.|+....+..||.
T Consensus       293 fKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  293 FKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            88888888888888888888888888888777777764

>KOG1074|consensus

Probab=99.90  E-value=8.8e-25  Score=182.46  Aligned_cols=142  Identities=36%  Similarity=0.729  Sum_probs=123.3

Q ss_pred             ceeccccccccCChHHHHHHHhhccCCCCeeCCCCCcccCChhHHHHHHHHhcCC----CCeecC---cCcccccChhHH
Q psy2288          64 KFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGV----KPHICK---QCGHAFTQKSQL  136 (247)
Q Consensus        64 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~----~~~~C~---~C~~~f~~~~~l  136 (247)
                      +.+|.+|.++..-.+.|+.|+++|++++||+|.+|++.|..+.+|+.|+.+|...    ..+.|+   +|-+.|.+...|
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccc
Confidence            4679999999999999999999999999999999999999999999999888543    346788   888888887777


Q ss_pred             HHHHHHhCCC-Cc-------------------------------------------------------------------
Q psy2288         137 RLHEMRHGNI-RH-------------------------------------------------------------------  148 (247)
Q Consensus       137 ~~h~~~~~~~-~~-------------------------------------------------------------------  148 (247)
                      ..|++.|.+. .+                                                                   
T Consensus       685 pQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~  764 (958)
T KOG1074|consen  685 PQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCG  764 (958)
T ss_pred             cceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCccccccc
Confidence            7776665210 00                                                                   


Q ss_pred             --------------------------------------------------------------------------------
Q psy2288         149 --------------------------------------------------------------------------------  148 (247)
Q Consensus       149 --------------------------------------------------------------------------------  148 (247)
                                                                                                      
T Consensus       765 ~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~  844 (958)
T KOG1074|consen  765 RELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATK  844 (958)
T ss_pred             cccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccccccc
Confidence                                                                                            


Q ss_pred             -----------------------------------cccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHH
Q psy2288         149 -----------------------------------FACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMK  193 (247)
Q Consensus       149 -----------------------------------~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  193 (247)
                                                         ..|..|++.|.+.+.|..|+++|.+++||.|..|++.|..+..|+
T Consensus       845 ~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLK  924 (958)
T KOG1074|consen  845 TNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLK  924 (958)
T ss_pred             cccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhh
Confidence                                               569999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCe
Q psy2288         194 EHLNRHKGVQPY  205 (247)
Q Consensus       194 ~H~~~h~~~~~~  205 (247)
                      .||.+|....++
T Consensus       925 vHMgtH~w~q~~  936 (958)
T KOG1074|consen  925 VHMGTHMWVQPP  936 (958)
T ss_pred             hhhccccccCCC
Confidence            999999876543

>KOG3623|consensus

Probab=99.87  E-value=2.7e-23  Score=171.25  Aligned_cols=107  Identities=27%  Similarity=0.619  Sum_probs=95.7

Q ss_pred             CceecccccccccCHHHHHHHHHHhCC--CCceeccccccccCChHHHHHHHhhccCC-------------CCeeCCCCC
Q psy2288          35 KSLACNICSMVFCDEIVLNKHVEEHST--LGKFTCTVCKKVFNNIKSLKTHSRIHTGE-------------KPFRCSVCG   99 (247)
Q Consensus        35 ~~~~C~~C~~~~~~~~~l~~H~~~~~~--~~~~~C~~C~~~f~~~~~l~~H~~~~~~~-------------~~~~C~~C~   99 (247)
                      ....|++|++.+.....|+.|++.-+.  +..|.|+.|..+|.....|.+||..|...             +-|+|.+|+
T Consensus       209 qlltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECg  288 (1007)
T KOG3623|consen  209 QLLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECG  288 (1007)
T ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccc
Confidence            347899999999999999999887443  44599999999999999999999988543             349999999


Q ss_pred             cccCChhHHHHHHHHhcCCCCeecCcCcccccChhHHHHHHH
Q psy2288         100 KSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEM  141 (247)
Q Consensus       100 ~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~  141 (247)
                      +.|..+..|+.|+++|.|++||.|+.|++.|.....+..|+.
T Consensus       289 KAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  289 KAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            999999999999999999999999999999999999999974

>KOG3576|consensus

Probab=99.73  E-value=1.4e-18  Score=122.95  Aligned_cols=114  Identities=30%  Similarity=0.656  Sum_probs=99.9

Q ss_pred             CCCeecCcCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHH
Q psy2288         118 VKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLN  197 (247)
Q Consensus       118 ~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  197 (247)
                      ...|.|.+|++.|....-|.+|++-|...+.+.|..||+.|.+...|.+|.++|+|.+||+|..|+++|+++-+|..|++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            45588999999999998999999988888899999999999999999999999999999999999999999999999987


Q ss_pred             hcCCC-----------CCeecccccccccChHHHHHHHHhccCCC
Q psy2288         198 RHKGV-----------QPYSCSHCDKTFFDAQSLNKHKLSHKTSA  231 (247)
Q Consensus       198 ~h~~~-----------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  231 (247)
                      ..+|.           +.|.|..||.+-.....+..|+..|+..-
T Consensus       195 kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence            76653           57999999999988889999998886543

>KOG3576|consensus

Probab=99.66  E-value=5.5e-17  Score=114.88  Aligned_cols=85  Identities=42%  Similarity=0.807  Sum_probs=74.6

Q ss_pred             cCCceecccccccccCHHHHHHHHHHhCCCCceeccccccccCChHHHHHHHhhccCCCCeeCCCCCcccCChhHHHHHH
Q psy2288          33 QQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHL  112 (247)
Q Consensus        33 ~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  112 (247)
                      ++..+.|..|++.|.-+..|.+|++-|...+.+.|..|++.|.+..+|.+|+++|++.+||+|..|++.|...-+|..|+
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            45568899999999989999999999988888999999999999999999999999999999999999999999999998


Q ss_pred             HHhcC
Q psy2288         113 AVHAG  117 (247)
Q Consensus       113 ~~~~~  117 (247)
                      +..++
T Consensus       194 ~kvhg  198 (267)
T KOG3576|consen  194 KKVHG  198 (267)
T ss_pred             HHHcC
Confidence            65544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.43  E-value=9.2e-13  Score=109.77  Aligned_cols=144  Identities=21%  Similarity=0.480  Sum_probs=92.8

Q ss_pred             ceeccccccccCChHHHHHHHhhccCCCCeeCCC--CCcccCChhHHHHHHHHhcCCCCeecCcCcccccChhHHHHHHH
Q psy2288          64 KFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEM  141 (247)
Q Consensus        64 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~  141 (247)
                      ...|+.|.+... ...|..|... .......|+.  |+..|.. ..+         +..+.|+.|++.|. ...|..|+.
T Consensus       407 ~V~C~NC~~~i~-l~~l~lHe~~-C~r~~V~Cp~~~Cg~v~~r-~el---------~~H~~C~~Cgk~f~-~s~LekH~~  473 (567)
T PLN03086        407 TVECRNCKHYIP-SRSIALHEAY-CSRHNVVCPHDGCGIVLRV-EEA---------KNHVHCEKCGQAFQ-QGEMEKHMK  473 (567)
T ss_pred             eEECCCCCCccc-hhHHHHHHhh-CCCcceeCCcccccceeec-ccc---------ccCccCCCCCCccc-hHHHHHHHH
Confidence            356777776533 3445566543 2334456764  7776632 212         23346777877775 466777777


Q ss_pred             HhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcc----------cHHHHHHHHHhcCCCCCeeccccc
Q psy2288         142 RHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFT----------RQIIMKEHLNRHKGVQPYSCSHCD  211 (247)
Q Consensus       142 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~----------~~~~l~~H~~~h~~~~~~~C~~C~  211 (247)
                      .++  .++.|+ |+..+ ....|..|+.+|.+.+++.|+.|+..+.          ....|..|.... |.+++.|..||
T Consensus       474 ~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cg  548 (567)
T PLN03086        474 VFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCG  548 (567)
T ss_pred             hcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccC
Confidence            764  677787 87544 4577777877777888888888887774          234777887774 77788888888


Q ss_pred             ccccChHHHHHHHHh
Q psy2288         212 KTFFDAQSLNKHKLS  226 (247)
Q Consensus       212 ~~f~~~~~l~~H~~~  226 (247)
                      +.+..+ .|..|+-.
T Consensus       549 k~Vrlr-dm~~H~~~  562 (567)
T PLN03086        549 RSVMLK-EMDIHQIA  562 (567)
T ss_pred             Ceeeeh-hHHHHHHH
Confidence            777543 56667643

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.40  E-value=2.1e-12  Score=107.65  Aligned_cols=86  Identities=16%  Similarity=0.433  Sum_probs=44.4

Q ss_pred             cccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccccccccc----------ChH
Q psy2288         149 FACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFF----------DAQ  218 (247)
Q Consensus       149 ~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~----------~~~  218 (247)
                      +.|+.|+..|. ...|..|+.+++  .++.|+ |+..+ .+..|..|+.+|.+.+++.|+.|++.|.          ...
T Consensus       454 ~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s  528 (567)
T PLN03086        454 VHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLR  528 (567)
T ss_pred             ccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhh
Confidence            45555555553 344555555543  455555 55433 3455555555555555555555555553          123


Q ss_pred             HHHHHHHhccCCCCCCCccccC
Q psy2288         219 SLNKHKLSHKTSADPISSAKGS  240 (247)
Q Consensus       219 ~l~~H~~~h~~~~~~~c~~c~~  240 (247)
                      .|..|..+. +.+++.|..|+.
T Consensus       529 ~Lt~HE~~C-G~rt~~C~~Cgk  549 (567)
T PLN03086        529 GMSEHESIC-GSRTAPCDSCGR  549 (567)
T ss_pred             hHHHHHHhc-CCcceEccccCC
Confidence            455555443 555555555544

>PHA00733 hypothetical protein

Probab=99.26  E-value=6.2e-12  Score=86.01  Aligned_cols=94  Identities=17%  Similarity=0.307  Sum_probs=65.0

Q ss_pred             hHHHHHHHHhCCCCccccCCCccccCChHHHHHH--HH---HhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         134 SQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRH--QR---SHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       134 ~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      ..|.++.......+++.|.+|...|.....|..+  +.   .+.+.+||.|+.|++.|.+...|..|++.+  ..+|.|+
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~  103 (128)
T PHA00733         26 EELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCP  103 (128)
T ss_pred             HHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCC
Confidence            4444444444445667777777666665554444  11   234477888888888888888888888876  3568888


Q ss_pred             cccccccChHHHHHHHHhccC
Q psy2288         209 HCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       209 ~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      +|++.|.....|..|+...|+
T Consensus       104 ~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        104 VCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCccCCHHHHHHHHHHhcC
Confidence            888888888888888876654

>PHA00733 hypothetical protein

Probab=99.12  E-value=9.1e-11  Score=80.28  Aligned_cols=84  Identities=24%  Similarity=0.465  Sum_probs=48.8

Q ss_pred             hhcCCceecccccccccCHHHHHHH--HHH---hCCCCceeccccccccCChHHHHHHHhhccCCCCeeCCCCCcccCCh
Q psy2288          31 EAQQKSLACNICSMVFCDEIVLNKH--VEE---HSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQR  105 (247)
Q Consensus        31 ~~~~~~~~C~~C~~~~~~~~~l~~H--~~~---~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~  105 (247)
                      .+.++++.|.+|...|.+...|..+  +..   .+...+|.|+.|++.|.+...|..|+..+  ..++.|+.|++.|.+.
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~  112 (128)
T PHA00733         35 TPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNT  112 (128)
T ss_pred             ChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCH
Confidence            3446777788877777766555544  111   22344566666666666666666666543  2345666666666666


Q ss_pred             hHHHHHHHHhc
Q psy2288         106 GILSSHLAVHA  116 (247)
Q Consensus       106 ~~l~~H~~~~~  116 (247)
                      ..|..|+...+
T Consensus       113 ~sL~~H~~~~h  123 (128)
T PHA00733        113 DSTLDHVCKKH  123 (128)
T ss_pred             HHHHHHHHHhc
Confidence            66666655443

>PHA02768 hypothetical protein; Provisional

Probab=99.09  E-value=4.5e-11  Score=67.41  Aligned_cols=44  Identities=18%  Similarity=0.487  Sum_probs=36.3

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHH
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLN  221 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  221 (247)
                      .|+|+.||+.|....+|..|+++|+  ++|+|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4788888888888888888888887  6788888888888776653

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.89  E-value=1.2e-09  Score=52.70  Aligned_cols=26  Identities=35%  Similarity=0.925  Sum_probs=20.3

Q ss_pred             HHHHHHHhcCCCCCeecccccccccC
Q psy2288         191 IMKEHLNRHKGVQPYSCSHCDKTFFD  216 (247)
Q Consensus       191 ~l~~H~~~h~~~~~~~C~~C~~~f~~  216 (247)
                      +|.+|+++|+|++||+|++|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47788888888888888888888753

...

>PHA02768 hypothetical protein; Provisional

Probab=98.84  E-value=1.3e-09  Score=61.47  Aligned_cols=42  Identities=17%  Similarity=0.445  Sum_probs=28.8

Q ss_pred             cccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHH
Q psy2288         149 FACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIM  192 (247)
Q Consensus       149 ~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  192 (247)
                      |.|+.||+.|...+.|..|+++|.  ++|+|..|++.|.+.+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            567777777777777777777766  566777777776655444

>KOG3993|consensus

Probab=98.81  E-value=7.2e-10  Score=87.49  Aligned_cols=165  Identities=21%  Similarity=0.345  Sum_probs=99.1

Q ss_pred             ceecccccccccCHHHHHHHHHHhCCCCceeccccccccCChHHHHHHHhhccCC-------------------------
Q psy2288          36 SLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGE-------------------------   90 (247)
Q Consensus        36 ~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~-------------------------   90 (247)
                      .|.|.+|...|.+...|.+|.-.-.-...|+|+.|+++|.-...|..|.+.|...                         
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            4889999999999999999955433334699999999999999999998777432                         


Q ss_pred             --------CCeeCCCCCcccCChhHHHHHHHHhcCCCC-----------------eecCcCcccccChhHHHHHHHHh-C
Q psy2288          91 --------KPFRCSVCGKSFSQRGILSSHLAVHAGVKP-----------------HICKQCGHAFTQKSQLRLHEMRH-G  144 (247)
Q Consensus        91 --------~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~-----------------~~C~~C~~~f~~~~~l~~h~~~~-~  144 (247)
                              ..|.|.+|++.|+....|+.|+.+|+....                 +-+..++..+.....-..+..-+ .
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~  426 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAG  426 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeec
Confidence                    125666666666666666666554432110                 11111211111110000000000 0


Q ss_pred             CCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcC
Q psy2288         145 NIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK  200 (247)
Q Consensus       145 ~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  200 (247)
                      ......++.++..+++...--.+.+.-..+..|.|.+|.-.|.....|.+|+..-|
T Consensus       427 sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~H  482 (500)
T KOG3993|consen  427 SAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCH  482 (500)
T ss_pred             cccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcC
Confidence            00113466777666555443333333444566889999999999999999987643

>KOG3993|consensus

Probab=98.76  E-value=1.5e-09  Score=85.75  Aligned_cols=165  Identities=19%  Similarity=0.292  Sum_probs=106.0

Q ss_pred             ceeccccccccCChHHHHHHHhhccCCCCeeCCCCCcccCChhHHHHHHHHhcC--------------------------
Q psy2288          64 KFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAG--------------------------  117 (247)
Q Consensus        64 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~--------------------------  117 (247)
                      -|.|..|...|.+...|.+|.-.-+-...|.|+.|++.|+-..+|..|.++|.-                          
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            489999999999999999997555555679999999999999999999998721                          


Q ss_pred             -------CCCeecCcCcccccChhHHHHHHHHhCCCCc-----------------cccCCCccccCChHHHHHHHHHhC-
Q psy2288         118 -------VKPHICKQCGHAFTQKSQLRLHEMRHGNIRH-----------------FACNVCPFKFTTKSDLQRHQRSHE-  172 (247)
Q Consensus       118 -------~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~-----------------~~C~~C~~~~~~~~~l~~H~~~h~-  172 (247)
                             +..|.|.+|++.|.....|+.|+.+|.....                 +.+..+...+...+.--.+.-.+. 
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~  426 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAG  426 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeec
Confidence                   1236677777777777777777655432110                 112222222211111000000000 


Q ss_pred             CCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhcc
Q psy2288         173 GVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       173 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  228 (247)
                      ......++.++..+..+..--.+.+.-..+..|-|.+|-..|.+..+|.+|...-|
T Consensus       427 sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~H  482 (500)
T KOG3993|consen  427 SAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCH  482 (500)
T ss_pred             cccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcC
Confidence            01123467777666665544444444444667999999999999999999976544

>PHA00616 hypothetical protein

Probab=98.69  E-value=1.1e-08  Score=54.94  Aligned_cols=34  Identities=18%  Similarity=0.307  Sum_probs=19.9

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      ||+|+.||+.|.+.++|..|++.|+|++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            3556666666666666666666666665555543

>PHA00616 hypothetical protein

Probab=98.69  E-value=8.3e-09  Score=55.38  Aligned_cols=34  Identities=21%  Similarity=0.330  Sum_probs=31.9

Q ss_pred             CeecccccccccChHHHHHHHHhccCCCCCCCcc
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSA  237 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  237 (247)
                      ||+|+.||+.|.+.++|..|+++|+++.++.|..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6999999999999999999999999999988764

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.60  E-value=3.3e-08  Score=47.69  Aligned_cols=25  Identities=52%  Similarity=1.283  Sum_probs=18.6

Q ss_pred             HHHHHHHHhCCCCCcccCcCchhcc
Q psy2288         163 DLQRHQRSHEGVKPFRCEYCDKTFT  187 (247)
Q Consensus       163 ~l~~H~~~h~~~~~~~C~~C~~~f~  187 (247)
                      +|.+|+++|.+++||.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            3667777777777777777777775

...

>PHA00732 hypothetical protein

Probab=98.47  E-value=1.1e-07  Score=59.03  Aligned_cols=36  Identities=31%  Similarity=0.691  Sum_probs=16.7

Q ss_pred             cccCcCchhcccHHHHHHHHHh-cCCCCCeeccccccccc
Q psy2288         177 FRCEYCDKTFTRQIIMKEHLNR-HKGVQPYSCSHCDKTFF  215 (247)
Q Consensus       177 ~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~  215 (247)
                      |.|..|++.|.+...|..|++. |.+   +.|++|++.|.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~   38 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR   38 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC
Confidence            4445555555555555555442 221   34555555544

>PHA00732 hypothetical protein

Probab=98.27  E-value=6.9e-07  Score=55.51  Aligned_cols=48  Identities=27%  Similarity=0.654  Sum_probs=31.0

Q ss_pred             ccccCCCccccCChHHHHHHHHH-hCCCCCcccCcCchhcccHHHHHHHHHhcCC
Q psy2288         148 HFACNVCPFKFTTKSDLQRHQRS-HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       148 ~~~C~~C~~~~~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  201 (247)
                      ||.|..|++.|.+.+.|..|++. |.   ++.|+.|++.|.   .|..|+.++.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccCC
Confidence            46677777777777777777764 33   246777777776   35667655544

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.25  E-value=1.9e-06  Score=49.73  Aligned_cols=49  Identities=27%  Similarity=0.521  Sum_probs=29.7

Q ss_pred             cccCcCchhcccHHHHHHHHHh-cCCC-CCeecccccccccChHHHHHHHHhcc
Q psy2288         177 FRCEYCDKTFTRQIIMKEHLNR-HKGV-QPYSCSHCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       177 ~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~  228 (247)
                      |.||.|++ ..+...|..|... |..+ +.+.||+|...+.  .+|..|+..+|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            66777777 3445667777654 3332 3577777776544  36777776654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.20  E-value=3.2e-06  Score=48.74  Aligned_cols=49  Identities=22%  Similarity=0.444  Sum_probs=26.6

Q ss_pred             ceecccccccccCHHHHHHHHHHhCCC--CceeccccccccCChHHHHHHHhhc
Q psy2288          36 SLACNICSMVFCDEIVLNKHVEEHSTL--GKFTCTVCKKVFNNIKSLKTHSRIH   87 (247)
Q Consensus        36 ~~~C~~C~~~~~~~~~l~~H~~~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~~   87 (247)
                      .|.||+|++ ..+...|..|+...+..  +.+.||+|...+.  ..|..|+...
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            356666666 34556666666554332  2466666665433  2555565544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.14  E-value=1.7e-06  Score=40.39  Aligned_cols=22  Identities=32%  Similarity=0.742  Sum_probs=14.8

Q ss_pred             eecccccccccChHHHHHHHHh
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLS  226 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~  226 (247)
                      |+|++|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5666677777777777666665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.97  E-value=6.3e-06  Score=38.79  Aligned_cols=24  Identities=29%  Similarity=0.721  Sum_probs=14.6

Q ss_pred             eecccccccccChHHHHHHHHhcc
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~h~  228 (247)
                      |+|++|++.|.+...|..|+.+|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            566677777777777777766653

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.93  E-value=6.3e-06  Score=38.44  Aligned_cols=22  Identities=32%  Similarity=0.905  Sum_probs=14.5

Q ss_pred             cccCcCchhcccHHHHHHHHHh
Q psy2288         177 FRCEYCDKTFTRQIIMKEHLNR  198 (247)
Q Consensus       177 ~~C~~C~~~f~~~~~l~~H~~~  198 (247)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666655

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.91  E-value=9.7e-06  Score=53.35  Aligned_cols=73  Identities=23%  Similarity=0.435  Sum_probs=18.4

Q ss_pred             ccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhc
Q psy2288         150 ACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       150 ~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      +|..|+..|.+...|..|+...++...-    ....+.....+..+++.-. ...+.|.+|++.|.+...|..|++++
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc----ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            3667777777777777777655543211    1111223333434433221 12578888888888888888888764

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.88  E-value=8.7e-06  Score=39.62  Aligned_cols=25  Identities=44%  Similarity=0.870  Sum_probs=18.7

Q ss_pred             CeecccccccccChHHHHHHHHhcc
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~  228 (247)
                      ||+|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5777777777777777777777664

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.69  E-value=3.5e-05  Score=36.12  Aligned_cols=23  Identities=30%  Similarity=0.881  Sum_probs=14.1

Q ss_pred             cccCcCchhcccHHHHHHHHHhc
Q psy2288         177 FRCEYCDKTFTRQIIMKEHLNRH  199 (247)
Q Consensus       177 ~~C~~C~~~f~~~~~l~~H~~~h  199 (247)
                      |.|+.|++.|.+...|..|+.+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45667777777777777776655

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.63  E-value=4.2e-05  Score=50.27  Aligned_cols=72  Identities=24%  Similarity=0.410  Sum_probs=12.4

Q ss_pred             ecccccccccCHHHHHHHHHHhCCCCceeccccccccCChHHHHHHHhhccCCCCeeCCCCCcccCChhHHHHHHHH
Q psy2288          38 ACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAV  114 (247)
Q Consensus        38 ~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  114 (247)
                      +|..|+..|++...|..|+...++...-    ....+.....+..+...... ..+.|..|+..|.+...|..|++.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~~-~~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKVK-ESFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHH
T ss_pred             Cccccccccccccccccccccccccccc----cccccccccccccccccccC-CCCCCCccCCCCcCHHHHHHHHcC
Confidence            3666666666666666666554432110    11111122222222221111 135555555555555555555554

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.60  E-value=4.1e-05  Score=37.17  Aligned_cols=25  Identities=40%  Similarity=0.856  Sum_probs=17.4

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcC
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHK  200 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~  200 (247)
                      +|+|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4667777777777777777776654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.41  E-value=0.00018  Score=39.58  Aligned_cols=32  Identities=19%  Similarity=0.371  Sum_probs=18.2

Q ss_pred             CCCCeecccccccccChHHHHHHHHhccCCCC
Q psy2288         201 GVQPYSCSHCDKTFFDAQSLNKHKLSHKTSAD  232 (247)
Q Consensus       201 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  232 (247)
                      .+.|..||+|+..+.+..+|.+|+...|+.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            45677777777777777777777766665554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.22  E-value=0.00029  Score=33.04  Aligned_cols=23  Identities=30%  Similarity=0.704  Sum_probs=12.3

Q ss_pred             eecccccccccChHHHHHHHHhcc
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~h~  228 (247)
                      |+|+.|+.... ...|.+|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666666555 556666665544

>smart00355 ZnF_C2H2 zinc finger

Probab=97.21  E-value=0.00032  Score=33.28  Aligned_cols=23  Identities=35%  Similarity=0.807  Sum_probs=13.0

Q ss_pred             eecccccccccChHHHHHHHHhc
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      |+|+.|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            34555666666555565555544

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.09  E-value=0.00036  Score=33.04  Aligned_cols=23  Identities=35%  Similarity=0.714  Sum_probs=17.3

Q ss_pred             eecccccccccChHHHHHHHHhc
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      |.|.+|+..|.+...|..|++++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56777888888888888777654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.02  E-value=0.00075  Score=37.20  Aligned_cols=32  Identities=19%  Similarity=0.435  Sum_probs=18.4

Q ss_pred             CCCCcccCcCchhcccHHHHHHHHHhcCCCCC
Q psy2288         173 GVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQP  204 (247)
Q Consensus       173 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  204 (247)
                      .+.|-.|++|+..+.+..+|++|+...|+.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            45566777777777777777777777666553

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.01  E-value=0.00012  Score=56.48  Aligned_cols=67  Identities=25%  Similarity=0.509  Sum_probs=37.4

Q ss_pred             CCccccCC--CccccCChHHHHHHHHH-hCCCCCcccCc--CchhcccHHHHHHHHHhcCCCCCeecccccccccChHHH
Q psy2288         146 IRHFACNV--CPFKFTTKSDLQRHQRS-HEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSL  220 (247)
Q Consensus       146 ~~~~~C~~--C~~~~~~~~~l~~H~~~-h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  220 (247)
                      ++||+|++  |++.|.+...|+-|+.- |..++..+=+.  =-..|            -...+||.|++|+|.+.+..+|
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F------------~~~~KPYrCevC~KRYKNlNGL  414 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF------------SAKDKPYRCEVCDKRYKNLNGL  414 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccc------------cccCCceeccccchhhccCccc
Confidence            58888875  88888888888888753 32222222111  00111            1224566666666666666555


Q ss_pred             HHHH
Q psy2288         221 NKHK  224 (247)
Q Consensus       221 ~~H~  224 (247)
                      .-|.
T Consensus       415 KYHr  418 (423)
T COG5189         415 KYHR  418 (423)
T ss_pred             eecc
Confidence            5553

>smart00355 ZnF_C2H2 zinc finger

Probab=97.00  E-value=0.00081  Score=31.82  Aligned_cols=23  Identities=39%  Similarity=0.915  Sum_probs=15.2

Q ss_pred             cccCcCchhcccHHHHHHHHHhc
Q psy2288         177 FRCEYCDKTFTRQIIMKEHLNRH  199 (247)
Q Consensus       177 ~~C~~C~~~f~~~~~l~~H~~~h  199 (247)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            45666777777777777766654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.91  E-value=0.00068  Score=31.73  Aligned_cols=23  Identities=30%  Similarity=0.764  Sum_probs=15.0

Q ss_pred             cccCcCchhcccHHHHHHHHHhcC
Q psy2288         177 FRCEYCDKTFTRQIIMKEHLNRHK  200 (247)
Q Consensus       177 ~~C~~C~~~f~~~~~l~~H~~~h~  200 (247)
                      |+|+.|+.... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777777776 777777777654

>KOG1146|consensus

Probab=96.87  E-value=0.00026  Score=64.64  Aligned_cols=50  Identities=22%  Similarity=0.204  Sum_probs=33.8

Q ss_pred             cccCcCchhcc-cHHHHHHHHHhcC------CCCCeecccccccccChHHHHHHHHh
Q psy2288         177 FRCEYCDKTFT-RQIIMKEHLNRHK------GVQPYSCSHCDKTFFDAQSLNKHKLS  226 (247)
Q Consensus       177 ~~C~~C~~~f~-~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~  226 (247)
                      +.|-+|+...+ +...|..|..+-.      ....|+|.+|....+.+.++..|.++
T Consensus       735 ~~civcd~~st~~l~~l~~h~~~~rs~ke~v~g~~~~c~l~~y~t~~kanfqlh~Kt  791 (1406)
T KOG1146|consen  735 FDCIVCDVFSTDRLDQLWFHNTRERSRKEQVPGDVPSCKLKPYATNTKANFQLHNKT  791 (1406)
T ss_pred             HHHhhhhhhhhhhHHHHhhcchhhhhhhhcccCCCCcceecccccccchhhhhhccc
Confidence            77888876544 3344555543321      12349999999999999999888765

>PRK04860 hypothetical protein; Provisional

Probab=96.86  E-value=0.00063  Score=48.49  Aligned_cols=38  Identities=29%  Similarity=0.769  Sum_probs=26.0

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFD  216 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  216 (247)
                      -+|.|. |+.   ....+++|.++|+++++|.|..|+..|..
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            357776 765   45566777777777777777777776653

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.80  E-value=0.00043  Score=53.53  Aligned_cols=68  Identities=25%  Similarity=0.408  Sum_probs=46.1

Q ss_pred             CCceeccc--cccccCChHHHHHHHhhcc-CCCCeeCC--CCCcccCChhHHHHHHHHhcCCCCeecCcCcccccChhHH
Q psy2288          62 LGKFTCTV--CKKVFNNIKSLKTHSRIHT-GEKPFRCS--VCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQL  136 (247)
Q Consensus        62 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~-~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l  136 (247)
                      .+||+|++  |++.|.+...|+-|+..-+ ..+...-+  .--..|            ....+||.|.+|++.+.+...|
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F------------~~~~KPYrCevC~KRYKNlNGL  414 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF------------SAKDKPYRCEVCDKRYKNLNGL  414 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccc------------cccCCceeccccchhhccCccc
Confidence            37899987  9999999999999976433 22211111  011112            3467889999999998888888


Q ss_pred             HHHHH
Q psy2288         137 RLHEM  141 (247)
Q Consensus       137 ~~h~~  141 (247)
                      +.|+.
T Consensus       415 KYHr~  419 (423)
T COG5189         415 KYHRK  419 (423)
T ss_pred             eeccc
Confidence            87764

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.56  E-value=0.0014  Score=30.98  Aligned_cols=22  Identities=32%  Similarity=0.905  Sum_probs=15.2

Q ss_pred             cccCcCchhcccHHHHHHHHHh
Q psy2288         177 FRCEYCDKTFTRQIIMKEHLNR  198 (247)
Q Consensus       177 ~~C~~C~~~f~~~~~l~~H~~~  198 (247)
                      |.|.+|+..|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4577777777777777777654

>KOG1146|consensus

Probab=96.20  E-value=0.00049  Score=62.88  Aligned_cols=28  Identities=21%  Similarity=0.425  Sum_probs=20.3

Q ss_pred             CceeccccccccCChHHHHHHHhhccCC
Q psy2288          63 GKFTCTVCKKVFNNIKSLKTHSRIHTGE   90 (247)
Q Consensus        63 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   90 (247)
                      +.++|+.|++.|.....|..||+..+.+
T Consensus       464 kt~~cpkc~~~yk~a~~L~vhmRskhp~  491 (1406)
T KOG1146|consen  464 KTLKCPKCNWHYKLAQTLGVHMRSKHPE  491 (1406)
T ss_pred             ccccCCccchhhhhHHHhhhcccccccc
Confidence            5677888887777777777777775444

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.16  E-value=0.0014  Score=31.69  Aligned_cols=22  Identities=36%  Similarity=0.735  Sum_probs=15.8

Q ss_pred             eecccccccccChHHHHHHHHh
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLS  226 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~  226 (247)
                      |-|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777777655

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.14  E-value=0.0031  Score=45.01  Aligned_cols=37  Identities=22%  Similarity=0.430  Sum_probs=32.7

Q ss_pred             CCeecccccccccChHHHHHHHHhccCCCCCCCccccCCCc
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF  243 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c~~~~~  243 (247)
                      -+|.|. |+.   ....+.+|.++|.++++|.|..|++.+.
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            479998 998   6678899999999999999999988764

>KOG2231|consensus

Probab=95.88  E-value=0.042  Score=47.86  Aligned_cols=103  Identities=25%  Similarity=0.565  Sum_probs=60.3

Q ss_pred             CCCCCcccCChhHHHHHHHHhcCCCCeecCcC---ccccc------ChhHHHHHHHHhCC-CC----ccccCCCccccCC
Q psy2288          95 CSVCGKSFSQRGILSSHLAVHAGVKPHICKQC---GHAFT------QKSQLRLHEMRHGN-IR----HFACNVCPFKFTT  160 (247)
Q Consensus        95 C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C---~~~f~------~~~~l~~h~~~~~~-~~----~~~C~~C~~~~~~  160 (247)
                      |..| ..|.....|+.|+...+..  +.|..|   .+.|.      ....|..|++.--. +.    .-.|..|...|..
T Consensus       118 ~~~c-~~~~s~~~Lk~H~~~~H~~--~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld  194 (669)
T KOG2231|consen  118 CLHC-TEFKSVENLKNHMRDQHKL--HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLD  194 (669)
T ss_pred             Cccc-cchhHHHHHHHHHHHhhhh--hccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhcc
Confidence            4444 3444667777787433221  233332   22332      24556666654221 11    2468888888888


Q ss_pred             hHHHHHHHHHhCCCCCcccCcC------chhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         161 KSDLQRHQRSHEGVKPFRCEYC------DKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       161 ~~~l~~H~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      ...|.+|++.++    |.|..|      +..|.....|..|.+.+|    |.|.
T Consensus       195 ~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE  240 (669)
T KOG2231|consen  195 DDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCE  240 (669)
T ss_pred             HHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC----cccc
Confidence            888888887766    455555      345667778888887766    5555

>KOG2231|consensus

Probab=95.85  E-value=0.036  Score=48.26  Aligned_cols=47  Identities=26%  Similarity=0.460  Sum_probs=27.7

Q ss_pred             ecCcCcccccChhHHHHHHHHhCCCCccccCCCc------cccCChHHHHHHHHHhC
Q psy2288         122 ICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCP------FKFTTKSDLQRHQRSHE  172 (247)
Q Consensus       122 ~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~------~~~~~~~~l~~H~~~h~  172 (247)
                      .|..|...|.....|..|++..+    |.|..|.      .-|.....|..|.+..|
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC
Confidence            46677777777777776666433    4555553      22445566666665555

>KOG2785|consensus

Probab=95.68  E-value=0.053  Score=43.55  Aligned_cols=52  Identities=21%  Similarity=0.505  Sum_probs=36.7

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcCCC-----------------------CCeeccccc---ccccChHHHHHHHHhc
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHKGV-----------------------QPYSCSHCD---KTFFDAQSLNKHKLSH  227 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~~h  227 (247)
                      |-.|-.|+..+.+...-..||..+||-                       .-|.|-.|+   +.|.+......||...
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~K  243 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRDK  243 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhhc
Confidence            456666777777766666777666652                       247888888   8888888888888653

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.56  E-value=0.0031  Score=30.42  Aligned_cols=22  Identities=27%  Similarity=0.673  Sum_probs=14.6

Q ss_pred             eecccccccccCHHHHHHHHHH
Q psy2288          37 LACNICSMVFCDEIVLNKHVEE   58 (247)
Q Consensus        37 ~~C~~C~~~~~~~~~l~~H~~~   58 (247)
                      |.|..|++.|.+...+..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4567777777777777666654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=95.51  E-value=0.092  Score=41.53  Aligned_cols=24  Identities=25%  Similarity=0.599  Sum_probs=18.6

Q ss_pred             CeecccccccccChHHHHHHHHhc
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      .-.|-.|.-.|-....|..||.-+
T Consensus       334 ~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  334 KSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             ccccccccccccCcchhhhhcccc
Confidence            356788888888888888887554

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.31  E-value=0.016  Score=27.30  Aligned_cols=20  Identities=30%  Similarity=0.780  Sum_probs=11.9

Q ss_pred             eecccccccccChHHHHHHHH
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKL  225 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~  225 (247)
                      .+|+.||..| ....|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            3566666666 4555666654

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.19  E-value=0.042  Score=43.44  Aligned_cols=126  Identities=25%  Similarity=0.493  Sum_probs=78.6

Q ss_pred             eeCCC--CCcccCChhHHHHHHHHhcCCCCeecCcCc---ccccC------hhHHHHHHHHhCCC----CccccCCCccc
Q psy2288          93 FRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQCG---HAFTQ------KSQLRLHEMRHGNI----RHFACNVCPFK  157 (247)
Q Consensus        93 ~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~---~~f~~------~~~l~~h~~~~~~~----~~~~C~~C~~~  157 (247)
                      |.|+.  |..+...-..|..|.++.++.  +.|.+|-   +.|+.      +..|+.|...-..+    -.-.|..|...
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            66765  555444455677887766543  4566553   44543      34455554432211    12368899988


Q ss_pred             cCChHHHHHHHHHhCCCCCcccCcCch-------hcccHHHHHHHHHhcCCCCCeeccc--c--c--ccccChHHHHHHH
Q psy2288         158 FTTKSDLQRHQRSHEGVKPFRCEYCDK-------TFTRQIIMKEHLNRHKGVQPYSCSH--C--D--KTFFDAQSLNKHK  224 (247)
Q Consensus       158 ~~~~~~l~~H~~~h~~~~~~~C~~C~~-------~f~~~~~l~~H~~~h~~~~~~~C~~--C--~--~~f~~~~~l~~H~  224 (247)
                      |.+-..|.+|++..+.    .|-+|++       .|....+|..|.+.-+    |-|.+  |  |  ..|.....|..|+
T Consensus       230 FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~~k~~vf~~~~el~~h~  301 (493)
T COG5236         230 FYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRVGKCYVFPYHTELLEHL  301 (493)
T ss_pred             ecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEecCcEEEeccHHHHHHHH
Confidence            9999999999887664    4666654       3667778888876533    55543  3  2  3788888899997


Q ss_pred             Hhcc
Q psy2288         225 LSHK  228 (247)
Q Consensus       225 ~~h~  228 (247)
                      ...|
T Consensus       302 ~~~h  305 (493)
T COG5236         302 TRFH  305 (493)
T ss_pred             HHHh
Confidence            6543

>KOG2785|consensus

Probab=95.17  E-value=0.093  Score=42.21  Aligned_cols=27  Identities=26%  Similarity=0.385  Sum_probs=22.6

Q ss_pred             CeecccccccccChHHHHHHHHhccCC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      |-.|-.|++.+.+...-..||..+|+-
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~Hgf  192 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGF  192 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCC
Confidence            578888999999988888999887664

>TIGR00622 ssl1 transcription factor ssl1

Probab=94.77  E-value=0.062  Score=35.59  Aligned_cols=18  Identities=28%  Similarity=0.643  Sum_probs=8.8

Q ss_pred             CeecCcCcccccChhHHH
Q psy2288         120 PHICKQCGHAFTQKSQLR  137 (247)
Q Consensus       120 ~~~C~~C~~~f~~~~~l~  137 (247)
                      |..|++|+....+...|.
T Consensus        15 P~~CpiCgLtLVss~HLA   32 (112)
T TIGR00622        15 PVECPICGLTLILSTHLA   32 (112)
T ss_pred             CCcCCcCCCEEeccchHH
Confidence            344555555554444444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG4173|consensus

Probab=94.65  E-value=0.025  Score=41.29  Aligned_cols=74  Identities=27%  Similarity=0.687  Sum_probs=42.1

Q ss_pred             ccccCC--CccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHh-c---------CCCCCeec--cccccc
Q psy2288         148 HFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNR-H---------KGVQPYSC--SHCDKT  213 (247)
Q Consensus       148 ~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h---------~~~~~~~C--~~C~~~  213 (247)
                      .+.|+.  |-..|.+...+..|..+-++.   .|..|.+.|.+..-|..|+.- |         .|.-.|+|  ..|+..
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhh
Confidence            344543  455566666666665554443   566666666666666666532 2         23344666  336666


Q ss_pred             ccChHHHHHHH
Q psy2288         214 FFDAQSLNKHK  224 (247)
Q Consensus       214 f~~~~~l~~H~  224 (247)
                      |-+...-..|+
T Consensus       156 FkT~r~RkdH~  166 (253)
T KOG4173|consen  156 FKTSRDRKDHM  166 (253)
T ss_pred             hhhhhhhhhHH
Confidence            66666666665

>KOG2893|consensus

Probab=94.59  E-value=0.0093  Score=44.46  Aligned_cols=45  Identities=29%  Similarity=0.743  Sum_probs=33.5

Q ss_pred             cCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHH-HHhc
Q psy2288         179 CEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKH-KLSH  227 (247)
Q Consensus       179 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h  227 (247)
                      |..|++.|.....|..|++..+    |+|-+|.+...+--.|..| |++|
T Consensus        13 cwycnrefddekiliqhqkakh----fkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAKH----FKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeecccccchhhhhhhhhhhcc----ceeeeehhhhccCCCceeehhhhh
Confidence            7778888888888888876533    8888888877777777777 4555

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.49  E-value=0.033  Score=28.51  Aligned_cols=24  Identities=29%  Similarity=0.566  Sum_probs=19.0

Q ss_pred             CeecccccccccChHHHHHHHHhc
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      +|.|.+|+..|.+...+..|+...
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHChH
Confidence            477888888888888888887553

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.85  E-value=0.13  Score=34.25  Aligned_cols=25  Identities=24%  Similarity=0.517  Sum_probs=16.3

Q ss_pred             eec----ccccccccChHHHHHHHHhccC
Q psy2288         205 YSC----SHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       205 ~~C----~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      |.|    +.|++.+.+...+.+|++.+|+
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            666    6666666666666666666543

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.80  E-value=0.011  Score=49.59  Aligned_cols=147  Identities=25%  Similarity=0.397  Sum_probs=69.5

Q ss_pred             CeeCCCCCcccCChhHHHHHHH--HhcCC--CCeecC--cCcccccChhHHHHHHHHhCCCCccccCC--CccccCChHH
Q psy2288          92 PFRCSVCGKSFSQRGILSSHLA--VHAGV--KPHICK--QCGHAFTQKSQLRLHEMRHGNIRHFACNV--CPFKFTTKSD  163 (247)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~--~~~~~--~~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~  163 (247)
                      ++.|..|...|.....+..|..  .|.++  +++.|+  .|++.|.....+..|...+....+..+..  +...+.....
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLN  368 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccC
Confidence            3455555555555555555555  45555  556665  46666665555555555555444444332  1111111110


Q ss_pred             -----HHHHHHHhCCCCCcccC--cCchhcccHHHHHHHHHhcCCCC--CeecccccccccChHHHHHHHHhccCCCCCC
Q psy2288         164 -----LQRHQRSHEGVKPFRCE--YCDKTFTRQIIMKEHLNRHKGVQ--PYSCSHCDKTFFDAQSLNKHKLSHKTSADPI  234 (247)
Q Consensus       164 -----l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  234 (247)
                           .......-.....+.+.  .|...+.....+..|...+-...  .+.+..|.+.+.....+..|++.+....+..
T Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (467)
T COG5048         369 NEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLL  448 (467)
T ss_pred             CCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCcee
Confidence                 00000011112222222  24444445555555555544433  3455556666666666666666665555554


Q ss_pred             Cccc
Q psy2288         235 SSAK  238 (247)
Q Consensus       235 c~~c  238 (247)
                      |...
T Consensus       449 ~~~~  452 (467)
T COG5048         449 CSIL  452 (467)
T ss_pred             eccc
Confidence            4433

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.56  E-value=0.072  Score=27.19  Aligned_cols=23  Identities=30%  Similarity=0.834  Sum_probs=14.5

Q ss_pred             ceecccccccccCHHHHHHHHHH
Q psy2288          36 SLACNICSMVFCDEIVLNKHVEE   58 (247)
Q Consensus        36 ~~~C~~C~~~~~~~~~l~~H~~~   58 (247)
                      ++.|.+|+..|.+...+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            45666666666666666666554

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>TIGR00622 ssl1 transcription factor ssl1

Probab=93.33  E-value=0.2  Score=33.25  Aligned_cols=109  Identities=17%  Similarity=0.315  Sum_probs=53.3

Q ss_pred             eeccccccccCChHHHHHHHhhccCCCCeeCCCCCcccCChhHHHHHHHHhcCCCCeecCcCcccccChhHHHHHHHHhC
Q psy2288          65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHG  144 (247)
Q Consensus        65 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~~  144 (247)
                      |.||.|+..+              -+.|..|+.|+-+..+...|.+....--.-++|.=      ....          .
T Consensus         2 Y~CPrC~skv--------------C~LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~e------v~~~----------~   51 (112)
T TIGR00622         2 YFCPQCRAKV--------------CELPVECPICGLTLILSTHLARSYHHLFPLKAFQE------IPLE----------E   51 (112)
T ss_pred             ccCCCCCCCc--------------cCCCCcCCcCCCEEeccchHHHhhhccCCCccccc------cccc----------c
Confidence            5677776543              23567788888887776666554321111111210      0000          0


Q ss_pred             CCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccccc
Q psy2288         145 NIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCD  211 (247)
Q Consensus       145 ~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  211 (247)
                      ......|-.|+..|........  ..-.....|+|+.|...|-..-++..|...|      .|+.|.
T Consensus        52 ~~~~~~C~~C~~~f~~~~~~~~--~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh------~CPGC~  110 (112)
T TIGR00622        52 YNGSRFCFGCQGPFPKPPVSPF--DELKDSHRYVCAVCKNVFCVDCDVFVHESLH------CCPGCI  110 (112)
T ss_pred             cCCCCcccCcCCCCCCcccccc--cccccccceeCCCCCCccccccchhhhhhcc------CCcCCC
Confidence            0111236666666654321000  0011233577777777777777777775444      366664

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2482|consensus

Probab=93.31  E-value=0.38  Score=38.24  Aligned_cols=134  Identities=19%  Similarity=0.301  Sum_probs=79.6

Q ss_pred             ceeccccccccc-CHHHHHHHHHHhCCC----------------------CceeccccccccCChHHHHHHHhhccCC--
Q psy2288          36 SLACNICSMVFC-DEIVLNKHVEEHSTL----------------------GKFTCTVCKKVFNNIKSLKTHSRIHTGE--   90 (247)
Q Consensus        36 ~~~C~~C~~~~~-~~~~l~~H~~~~~~~----------------------~~~~C~~C~~~f~~~~~l~~H~~~~~~~--   90 (247)
                      ..+|-+|...+. ..+....|+..-|+-                      ..+.|-.|.+.|.++..|+.||+.....  
T Consensus       144 slqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrri  223 (423)
T KOG2482|consen  144 SLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRRI  223 (423)
T ss_pred             eeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCccc
Confidence            478999987654 567777776654321                      2478999999999999999999753211  


Q ss_pred             CC--------eeCCCCCcccCChhHHHHHH--HHh---------------cCCCC--eecCcCcccccChhHHHHHHHHh
Q psy2288          91 KP--------FRCSVCGKSFSQRGILSSHL--AVH---------------AGVKP--HICKQCGHAFTQKSQLRLHEMRH  143 (247)
Q Consensus        91 ~~--------~~C~~C~~~f~~~~~l~~H~--~~~---------------~~~~~--~~C~~C~~~f~~~~~l~~h~~~~  143 (247)
                      .|        |.-.+-..+-++.. ...+.  .+-               .+..+  ..|..|.....+...|..|+...
T Consensus       224 nPknreYDkfyiINY~ev~ks~t~-~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk~v  302 (423)
T KOG2482|consen  224 NPKNREYDKFYIINYLEVGKSWTI-VHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMKIV  302 (423)
T ss_pred             CCCccccceEEEEeHhhcCCccch-hhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHHHH
Confidence            11        11111111111110 01111  000               01112  47888888777777788887643


Q ss_pred             CC---------------------------CCccccCCCccccCChHHHHHHHHH
Q psy2288         144 GN---------------------------IRHFACNVCPFKFTTKSDLQRHQRS  170 (247)
Q Consensus       144 ~~---------------------------~~~~~C~~C~~~~~~~~~l~~H~~~  170 (247)
                      +.                           ...-.|-.|...|.....|..|+.-
T Consensus       303 He~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e  356 (423)
T KOG2482|consen  303 HEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVE  356 (423)
T ss_pred             HHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhccc
Confidence            21                           1124578889999999999999854

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.09  E-value=0.019  Score=48.07  Aligned_cols=149  Identities=26%  Similarity=0.429  Sum_probs=92.3

Q ss_pred             ceeccccccccCChHHHHHHHh--hccCC--CCeeCC--CCCcccCChhHHHHHHHHhcCCCCeecCcCc--ccccChhH
Q psy2288          64 KFTCTVCKKVFNNIKSLKTHSR--IHTGE--KPFRCS--VCGKSFSQRGILSSHLAVHAGVKPHICKQCG--HAFTQKSQ  135 (247)
Q Consensus        64 ~~~C~~C~~~f~~~~~l~~H~~--~~~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~--~~f~~~~~  135 (247)
                      ++.|..|...|.....+..|..  .|..+  .++.|+  .|++.|.+...+..|...+....++.+..-.  ..+.....
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLN  368 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccC
Confidence            5778888888888888888888  67777  788888  6888888888888888877777666654422  22221111


Q ss_pred             H-----HHHHHHhCCCCccccC--CCccccCChHHHHHHHHHhCCCC--CcccCcCchhcccHHHHHHHHHhcCCCCCee
Q psy2288         136 L-----RLHEMRHGNIRHFACN--VCPFKFTTKSDLQRHQRSHEGVK--PFRCEYCDKTFTRQIIMKEHLNRHKGVQPYS  206 (247)
Q Consensus       136 l-----~~h~~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  206 (247)
                      -     ............+.+.  .|...+.....+..|...+....  .+.+..|...+.....+..|++.+.-..++.
T Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (467)
T COG5048         369 NEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLL  448 (467)
T ss_pred             CCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCcee
Confidence            0     0000011112222222  24444455555555555555544  3556778888888888888888887776666


Q ss_pred             cccccc
Q psy2288         207 CSHCDK  212 (247)
Q Consensus       207 C~~C~~  212 (247)
                      |..+..
T Consensus       449 ~~~~~~  454 (467)
T COG5048         449 CSILKS  454 (467)
T ss_pred             eccccc
Confidence            655544

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=92.71  E-value=0.22  Score=39.53  Aligned_cols=77  Identities=21%  Similarity=0.305  Sum_probs=39.3

Q ss_pred             eeccc--ccccccCHHHHHHHHHHhCCCCceecccccc---ccC------ChHHHHHHHhhccCCC----CeeCCCCCcc
Q psy2288          37 LACNI--CSMVFCDEIVLNKHVEEHSTLGKFTCTVCKK---VFN------NIKSLKTHSRIHTGEK----PFRCSVCGKS  101 (247)
Q Consensus        37 ~~C~~--C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~---~f~------~~~~l~~H~~~~~~~~----~~~C~~C~~~  101 (247)
                      |.||.  |..+......|..|.+..+.  .+.|.+|-.   .|.      ++..|+.|...-..+.    --.|..|...
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~--~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHG--FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcC--cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            45653  55555556677777776555  456666632   232      2233444433221111    1235566666


Q ss_pred             cCChhHHHHHHHHh
Q psy2288         102 FSQRGILSSHLAVH  115 (247)
Q Consensus       102 f~~~~~l~~H~~~~  115 (247)
                      |.+.+.|..|++..
T Consensus       230 FYdDDEL~~HcR~~  243 (493)
T COG5236         230 FYDDDELRRHCRLR  243 (493)
T ss_pred             ecChHHHHHHHHhh
Confidence            66666666665543

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=92.59  E-value=0.091  Score=26.59  Aligned_cols=8  Identities=38%  Similarity=1.103  Sum_probs=3.6

Q ss_pred             ccccCCCc
Q psy2288         148 HFACNVCP  155 (247)
Q Consensus       148 ~~~C~~C~  155 (247)
                      ++.||.|+
T Consensus        17 ~~~CP~Cg   24 (33)
T cd00350          17 PWVCPVCG   24 (33)
T ss_pred             CCcCcCCC
Confidence            34444444

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2893|consensus

Probab=92.38  E-value=0.034  Score=41.55  Aligned_cols=44  Identities=30%  Similarity=0.544  Sum_probs=36.4

Q ss_pred             eecccccccccCHHHHHHHHHHhCCCCceeccccccccCChHHHHHHH
Q psy2288          37 LACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHS   84 (247)
Q Consensus        37 ~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~   84 (247)
                      -+|=+|++.|.+...|.+|++..+    |+|.+|.+...+--.|..|-
T Consensus        11 pwcwycnrefddekiliqhqkakh----fkchichkkl~sgpglsihc   54 (341)
T KOG2893|consen   11 PWCWYCNREFDDEKILIQHQKAKH----FKCHICHKKLFSGPGLSIHC   54 (341)
T ss_pred             ceeeecccccchhhhhhhhhhhcc----ceeeeehhhhccCCCceeeh
Confidence            469999999999999999988754    78999998877777777663

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=92.35  E-value=0.072  Score=25.32  Aligned_cols=9  Identities=33%  Similarity=0.818  Sum_probs=4.9

Q ss_pred             ccCcCchhc
Q psy2288         178 RCEYCDKTF  186 (247)
Q Consensus       178 ~C~~C~~~f  186 (247)
                      .|+.||..|
T Consensus        16 ~Cp~CG~~F   24 (26)
T PF10571_consen   16 FCPHCGYDF   24 (26)
T ss_pred             cCCCCCCCC
Confidence            455555554

Several members are annotated as putative helicases.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=92.06  E-value=0.33  Score=32.34  Aligned_cols=54  Identities=22%  Similarity=0.600  Sum_probs=42.3

Q ss_pred             CccccCCCccccCChHHHHHHHHHhCCC------------------------------------------CCccc----C
Q psy2288         147 RHFACNVCPFKFTTKSDLQRHQRSHEGV------------------------------------------KPFRC----E  180 (247)
Q Consensus       147 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~------------------------------------------~~~~C----~  180 (247)
                      +-..|..|+.++.- +.+..|++..+..                                          ..|.|    +
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~~   88 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDPP   88 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCCC
Confidence            44679999988765 7888888743311                                          12889    9


Q ss_pred             cCchhcccHHHHHHHHHhcCC
Q psy2288         181 YCDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       181 ~C~~~f~~~~~l~~H~~~h~~  201 (247)
                      .|++.+.+...+.+|++.+||
T Consensus        89 ~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   89 HCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCCcEeccHHHHHHHHHHhcC
Confidence            999999999999999998775

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=89.54  E-value=0.18  Score=27.45  Aligned_cols=11  Identities=18%  Similarity=0.658  Sum_probs=5.0

Q ss_pred             cccCcCchhcc
Q psy2288         177 FRCEYCDKTFT  187 (247)
Q Consensus       177 ~~C~~C~~~f~  187 (247)
                      |.|..||..|.
T Consensus         3 Y~C~~Cg~~~~   13 (44)
T smart00659        3 YICGECGRENE   13 (44)
T ss_pred             EECCCCCCEee
Confidence            44444444433

present in RNA polymerase I, II and III

>PHA00626 hypothetical protein

Probab=89.48  E-value=0.1  Score=29.45  Aligned_cols=13  Identities=23%  Similarity=0.557  Sum_probs=6.6

Q ss_pred             CCeeccccccccc
Q psy2288         203 QPYSCSHCDKTFF  215 (247)
Q Consensus       203 ~~~~C~~C~~~f~  215 (247)
                      ..|+|+.||..|+
T Consensus        22 nrYkCkdCGY~ft   34 (59)
T PHA00626         22 DDYVCCDCGYNDS   34 (59)
T ss_pred             cceEcCCCCCeec
Confidence            3455555555553

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=89.24  E-value=0.16  Score=28.63  Aligned_cols=31  Identities=26%  Similarity=0.427  Sum_probs=20.6

Q ss_pred             hhcCCceecccccccccCHHHHHHHHHHhCC
Q psy2288          31 EAQQKSLACNICSMVFCDEIVLNKHVEEHST   61 (247)
Q Consensus        31 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~   61 (247)
                      ..++.-+.||-|+..|........|+...++
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            3455667777777777777777777665444

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=88.03  E-value=0.26  Score=27.78  Aligned_cols=24  Identities=21%  Similarity=0.476  Sum_probs=12.1

Q ss_pred             CCCCeecccccccccChHHHHHHH
Q psy2288         201 GVQPYSCSHCDKTFFDAQSLNKHK  224 (247)
Q Consensus       201 ~~~~~~C~~C~~~f~~~~~l~~H~  224 (247)
                      |+..+.||-||..|....+..+|+
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHV   37 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHV   37 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHh
Confidence            344455555555555555555554

>KOG4173|consensus

Probab=87.63  E-value=0.28  Score=35.97  Aligned_cols=84  Identities=24%  Similarity=0.453  Sum_probs=49.9

Q ss_pred             CeeCCC--CCcccCChhHHHHHHHHhcCCCCeecCcCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHH
Q psy2288          92 PFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR  169 (247)
Q Consensus        92 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~  169 (247)
                      .+.|+.  |...|.+...+..|..+.++.   .|..|.+.|++...|..|+...+.                +.|  ...
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HD----------------s~F--qa~  137 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHD----------------SLF--QAL  137 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHH----------------HHH--HHH
Confidence            356665  556666666666666544443   477777777777777777654221                000  112


Q ss_pred             HhCCCCCcccC--cCchhcccHHHHHHHH
Q psy2288         170 SHEGVKPFRCE--YCDKTFTRQIIMKEHL  196 (247)
Q Consensus       170 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~  196 (247)
                      +..|...|+|-  .|+..|.+...-..|+
T Consensus       138 veRG~dMy~ClvEgCt~KFkT~r~RkdH~  166 (253)
T KOG4173|consen  138 VERGQDMYQCLVEGCTEKFKTSRDRKDHM  166 (253)
T ss_pred             HHcCccHHHHHHHhhhhhhhhhhhhhhHH
Confidence            33455667773  4777777777777776

>smart00531 TFIIE Transcription initiation factor IIE

Probab=87.58  E-value=0.68  Score=32.74  Aligned_cols=12  Identities=17%  Similarity=0.520  Sum_probs=6.1

Q ss_pred             ceeccccccccc
Q psy2288          36 SLACNICSMVFC   47 (247)
Q Consensus        36 ~~~C~~C~~~~~   47 (247)
                      .|.|+.|+..|.
T Consensus        99 ~Y~Cp~C~~~y~  110 (147)
T smart00531       99 YYKCPNCQSKYT  110 (147)
T ss_pred             EEECcCCCCEee
Confidence            455555555544

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=87.50  E-value=0.48  Score=27.25  Aligned_cols=32  Identities=25%  Similarity=0.517  Sum_probs=16.2

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcCCCCCeecccccc
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDK  212 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  212 (247)
                      .|.|+.||.....+..--+     .-..+|+|+.||.
T Consensus        27 ~F~CPnCGe~~I~Rc~~CR-----k~g~~Y~Cp~CGF   58 (61)
T COG2888          27 KFPCPNCGEVEIYRCAKCR-----KLGNPYRCPKCGF   58 (61)
T ss_pred             EeeCCCCCceeeehhhhHH-----HcCCceECCCcCc
Confidence            3667777755443322111     1135677777764

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=87.38  E-value=0.38  Score=24.49  Aligned_cols=10  Identities=30%  Similarity=0.856  Sum_probs=5.5

Q ss_pred             CCeecccccc
Q psy2288         203 QPYSCSHCDK  212 (247)
Q Consensus       203 ~~~~C~~C~~  212 (247)
                      .|-.||+||.
T Consensus        17 ~p~~CP~Cg~   26 (34)
T cd00729          17 APEKCPICGA   26 (34)
T ss_pred             CCCcCcCCCC
Confidence            3456666654

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=86.76  E-value=0.3  Score=32.43  Aligned_cols=29  Identities=24%  Similarity=0.638  Sum_probs=15.3

Q ss_pred             ccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccCh
Q psy2288         178 RCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDA  217 (247)
Q Consensus       178 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  217 (247)
                      .|+.||..|...           +..|..||+||..|.-.
T Consensus        11 ~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   11 TCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             cCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            466666555533           13455666666655433

The function of members of this family is unknown.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=86.68  E-value=0.82  Score=32.75  Aligned_cols=35  Identities=20%  Similarity=0.379  Sum_probs=23.4

Q ss_pred             hCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccc
Q psy2288         171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTF  214 (247)
Q Consensus       171 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  214 (247)
                      .....-|.|+.|+..|+...++.         .-|.||.||...
T Consensus       104 e~~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L  138 (158)
T TIGR00373       104 ETNNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAML  138 (158)
T ss_pred             ccCCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEe
Confidence            34455577888887777776663         248888888643

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=86.56  E-value=0.61  Score=22.11  Aligned_cols=20  Identities=20%  Similarity=0.388  Sum_probs=14.2

Q ss_pred             eecccccccccChHHHHHHHH
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKL  225 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~  225 (247)
                      ..||+|++.+ ....+..|+-
T Consensus         2 v~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        2 VQCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             CcCCCCcCcc-cHHHHHHHHH
Confidence            3688888887 5567777764

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=86.00  E-value=0.17  Score=27.18  Aligned_cols=29  Identities=28%  Similarity=0.473  Sum_probs=15.9

Q ss_pred             eecccccccccChHHHHHHHHhccCCCCCCCccccC
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGS  240 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c~~  240 (247)
                      |+|..||..|.....+      .. ..+..|+.||+
T Consensus         6 y~C~~Cg~~fe~~~~~------~~-~~~~~CP~Cg~   34 (42)
T PF09723_consen    6 YRCEECGHEFEVLQSI------SE-DDPVPCPECGS   34 (42)
T ss_pred             EEeCCCCCEEEEEEEc------CC-CCCCcCCCCCC
Confidence            6677777666432221      11 45666777766

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=85.79  E-value=0.87  Score=32.61  Aligned_cols=31  Identities=19%  Similarity=0.382  Sum_probs=17.1

Q ss_pred             CCceecccccccccCHHHHHHHHHHhCCCCceeccccccc
Q psy2288          34 QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKV   73 (247)
Q Consensus        34 ~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~   73 (247)
                      ..-|.|+.|+..|+...++.         ..|.||.||..
T Consensus       107 ~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~  137 (158)
T TIGR00373       107 NMFFICPNMCVRFTFNEAME---------LNFTCPRCGAM  137 (158)
T ss_pred             CCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCE
Confidence            34466666666665555553         14666666654

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=85.68  E-value=0.94  Score=23.38  Aligned_cols=8  Identities=25%  Similarity=1.057  Sum_probs=3.2

Q ss_pred             cccccccc
Q psy2288          67 CTVCKKVF   74 (247)
Q Consensus        67 C~~C~~~f   74 (247)
                      |+.|+..|
T Consensus         5 Cp~C~~~y   12 (36)
T PF13717_consen    5 CPNCQAKY   12 (36)
T ss_pred             CCCCCCEE
Confidence            34444333

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=85.43  E-value=0.89  Score=23.62  Aligned_cols=8  Identities=38%  Similarity=0.995  Sum_probs=3.1

Q ss_pred             cccccccc
Q psy2288          39 CNICSMVF   46 (247)
Q Consensus        39 C~~C~~~~   46 (247)
                      ||.|+..|
T Consensus         5 CP~C~~~f   12 (37)
T PF13719_consen    5 CPNCQTRF   12 (37)
T ss_pred             CCCCCceE
Confidence            33343333

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=85.31  E-value=0.4  Score=36.59  Aligned_cols=27  Identities=26%  Similarity=0.501  Sum_probs=22.8

Q ss_pred             CCCeecccccccccChHHHHHHHHhcc
Q psy2288         202 VQPYSCSHCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       202 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  228 (247)
                      .+++.||.||........|..-.++|.
T Consensus       207 ~k~~PCPKCg~et~eTkdLSmStR~hk  233 (314)
T PF06524_consen  207 GKPIPCPKCGYETQETKDLSMSTRSHK  233 (314)
T ss_pred             CCCCCCCCCCCcccccccceeeeecch
Confidence            478999999999999888888777773

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>KOG2186|consensus

Probab=85.13  E-value=0.63  Score=35.44  Aligned_cols=48  Identities=25%  Similarity=0.562  Sum_probs=33.0

Q ss_pred             CeeCCCCCcccCChhHHHHHHHHhcCCCCeecCcCcccccChhHHHHHHHH
Q psy2288          92 PFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMR  142 (247)
Q Consensus        92 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~  142 (247)
                      .|.|..||....- ..+..|+..-.+ ..|.|..|++.|.. ..+..|..-
T Consensus         3 ~FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kC   50 (276)
T KOG2186|consen    3 FFTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKC   50 (276)
T ss_pred             EEehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhhh
Confidence            3678888876554 446667766655 66888888888876 566667653

>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription]

Probab=85.04  E-value=0.37  Score=26.72  Aligned_cols=10  Identities=20%  Similarity=1.059  Sum_probs=5.3

Q ss_pred             cccCcCchhc
Q psy2288         177 FRCEYCDKTF  186 (247)
Q Consensus       177 ~~C~~C~~~f  186 (247)
                      |.|..|++.|
T Consensus         7 Y~C~~Cg~~~   16 (49)
T COG1996           7 YKCARCGREV   16 (49)
T ss_pred             EEhhhcCCee
Confidence            4555555554

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=84.70  E-value=0.74  Score=26.57  Aligned_cols=9  Identities=33%  Similarity=0.685  Sum_probs=4.5

Q ss_pred             cccCCCccc
Q psy2288         149 FACNVCPFK  157 (247)
Q Consensus       149 ~~C~~C~~~  157 (247)
                      |.|+.||..
T Consensus        26 F~CPnCG~~   34 (59)
T PRK14890         26 FLCPNCGEV   34 (59)
T ss_pred             eeCCCCCCe
Confidence            455555544

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=84.62  E-value=0.3  Score=25.88  Aligned_cols=11  Identities=45%  Similarity=1.135  Sum_probs=5.6

Q ss_pred             eeccccccccc
Q psy2288         205 YSCSHCDKTFF  215 (247)
Q Consensus       205 ~~C~~C~~~f~  215 (247)
                      |+|+.||..|.
T Consensus         6 y~C~~Cg~~fe   16 (41)
T smart00834        6 YRCEDCGHTFE   16 (41)
T ss_pred             EEcCCCCCEEE
Confidence            45555555443

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=84.13  E-value=1.1  Score=32.83  Aligned_cols=33  Identities=24%  Similarity=0.547  Sum_probs=21.3

Q ss_pred             CCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccc
Q psy2288         173 GVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTF  214 (247)
Q Consensus       173 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  214 (247)
                      ...-|.|+.|+..|+...++.         .-|.|+.||...
T Consensus       114 ~~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L  146 (178)
T PRK06266        114 NNMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEML  146 (178)
T ss_pred             CCCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCC
Confidence            344577777777777666542         247777777644

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=83.24  E-value=0.17  Score=35.89  Aligned_cols=14  Identities=36%  Similarity=0.532  Sum_probs=8.5

Q ss_pred             cccCcCchhcccHH
Q psy2288         177 FRCEYCDKTFTRQI  190 (247)
Q Consensus       177 ~~C~~C~~~f~~~~  190 (247)
                      ++|+.||..|.+..
T Consensus        29 ~~c~~c~~~f~~~e   42 (154)
T PRK00464         29 RECLACGKRFTTFE   42 (154)
T ss_pred             eeccccCCcceEeE
Confidence            56666666666543

>KOG2807|consensus

Probab=82.76  E-value=1.8  Score=34.34  Aligned_cols=25  Identities=24%  Similarity=0.476  Sum_probs=13.8

Q ss_pred             CCeecccccccccChHHHHHHHHhc
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      ..|+|+.|...|=---+.-.|-..|
T Consensus       344 ~~y~C~~Ck~~FCldCDv~iHesLh  368 (378)
T KOG2807|consen  344 GRYRCESCKNVFCLDCDVFIHESLH  368 (378)
T ss_pred             CcEEchhccceeeccchHHHHhhhh
Confidence            3466666666665555555554333

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=82.75  E-value=1.2  Score=32.61  Aligned_cols=16  Identities=19%  Similarity=0.389  Sum_probs=8.1

Q ss_pred             ceecccccccccCHHH
Q psy2288          36 SLACNICSMVFCDEIV   51 (247)
Q Consensus        36 ~~~C~~C~~~~~~~~~   51 (247)
                      -|.|+.|+..|+...+
T Consensus       117 ~Y~Cp~C~~rytf~eA  132 (178)
T PRK06266        117 FFFCPNCHIRFTFDEA  132 (178)
T ss_pred             EEECCCCCcEEeHHHH
Confidence            4555555555544443

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=82.35  E-value=1.2  Score=23.08  Aligned_cols=8  Identities=38%  Similarity=1.032  Sum_probs=3.2

Q ss_pred             cccccccc
Q psy2288          39 CNICSMVF   46 (247)
Q Consensus        39 C~~C~~~~   46 (247)
                      |+.|+..|
T Consensus         5 CP~C~~~~   12 (38)
T TIGR02098         5 CPNCKTSF   12 (38)
T ss_pred             CCCCCCEE
Confidence            44444433

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF08274 PhnA_Zn_Ribbon: PhnA Zinc-Ribbon ; InterPro: IPR013987 The PhnA protein family includes the uncharacterised Escherichia coli protein PhnA and its homologues

Probab=82.10  E-value=0.7  Score=22.76  Aligned_cols=25  Identities=20%  Similarity=0.692  Sum_probs=10.2

Q ss_pred             ccCcCchhcccHHHHHHHHHhcCCCCCeeccccccc
Q psy2288         178 RCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT  213 (247)
Q Consensus       178 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  213 (247)
                      .|+.|+..+.+           .+...|.|+.|+..
T Consensus         4 ~Cp~C~se~~y-----------~D~~~~vCp~C~~e   28 (30)
T PF08274_consen    4 KCPLCGSEYTY-----------EDGELLVCPECGHE   28 (30)
T ss_dssp             --TTT-----E-----------E-SSSEEETTTTEE
T ss_pred             CCCCCCCccee-----------ccCCEEeCCccccc
Confidence            46666655554           33445777777654

The E. coli phnA gene is part of a large operon associated with alkylphosphonate uptake and carbon-phosphorus bond cleavage []. The protein is not related to the characterised phosphonoacetate hydrolase designated PhnA []. This entry represents the N-terminal domain of PhnA, which is predicted to form a zinc-ribbon.; PDB: 2AKL_A.

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=81.58  E-value=0.43  Score=26.92  Aligned_cols=11  Identities=36%  Similarity=1.056  Sum_probs=5.6

Q ss_pred             eeccccccccc
Q psy2288         205 YSCSHCDKTFF  215 (247)
Q Consensus       205 ~~C~~C~~~f~  215 (247)
                      |+|..||..|.
T Consensus         6 y~C~~Cg~~fe   16 (52)
T TIGR02605         6 YRCTACGHRFE   16 (52)
T ss_pred             EEeCCCCCEeE
Confidence            45555555443

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>KOG2593|consensus

Probab=81.57  E-value=1.5  Score=36.21  Aligned_cols=37  Identities=22%  Similarity=0.473  Sum_probs=17.4

Q ss_pred             CCeecccccccccChHHHHHHHHhccCCCCCCCccccCCC
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKL  242 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c~~~~  242 (247)
                      .-|.||.|++.|+.   |..-...-.....|.|..|++.+
T Consensus       127 ~~Y~Cp~C~kkyt~---Lea~~L~~~~~~~F~C~~C~gel  163 (436)
T KOG2593|consen  127 AGYVCPNCQKKYTS---LEALQLLDNETGEFHCENCGGEL  163 (436)
T ss_pred             ccccCCccccchhh---hHHHHhhcccCceEEEecCCCch
Confidence            34555555555542   33333333334455555555544

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=80.96  E-value=1  Score=24.69  Aligned_cols=8  Identities=25%  Similarity=0.746  Sum_probs=3.7

Q ss_pred             eecccccc
Q psy2288         205 YSCSHCDK  212 (247)
Q Consensus       205 ~~C~~C~~  212 (247)
                      ..|+.||.
T Consensus        22 ~~Cp~CG~   29 (46)
T PRK00398         22 VRCPYCGY   29 (46)
T ss_pred             eECCCCCC
Confidence            44444443

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=80.90  E-value=1.1  Score=32.24  Aligned_cols=11  Identities=36%  Similarity=0.845  Sum_probs=5.9

Q ss_pred             CCCCcccCcCc
Q psy2288         173 GVKPFRCEYCD  183 (247)
Q Consensus       173 ~~~~~~C~~C~  183 (247)
                      ++.|-.||+||
T Consensus       146 ge~P~~CPiCg  156 (166)
T COG1592         146 GEAPEVCPICG  156 (166)
T ss_pred             CCCCCcCCCCC
Confidence            34455566665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	247
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-34
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-19
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-15
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-13
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		5e-06
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-13
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-07
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-13
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		4e-09
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		7e-12
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		6e-10
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-11
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		3e-11
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-11
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-10
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-09
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		4e-11
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		8e-09
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-11
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-08
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-11
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-09
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		9e-09
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		6e-11
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		7e-11
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-08
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		8e-11
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-09
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		8e-11
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-08
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		9e-11
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		4e-08
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		9e-11
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		4e-08
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-10
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		3e-10
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		3e-09
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		6e-10
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		9e-07
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		7e-10
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		6e-08
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		4e-07
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		9e-10
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-09
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-06
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-09
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-09
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		4e-09
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		4e-06
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-08
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		3e-07
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		2e-08
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		5e-05
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		3e-08
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		6e-05
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		5e-08
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		5e-07
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		5e-07
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		5e-06
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		1e-06
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		3e-05
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		2e-06
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		3e-06
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		8e-06
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		4e-06
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		5e-04
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		5e-06
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		4e-05
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		6e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		8e-04
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		1e-05
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		3e-04
2ena_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-05
2yta_A	41	Solution Structure Of C2h2 Type Zinc Finger Domain		6e-05
2en6_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		1e-04
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-04
2eml_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2ytb_A	42	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-04
2yrj_A	46	Solution Structure Of The C2h2-Type Zinc Finger Dom		4e-04
2eq3_A	46	Solution Structure Of The 17th C2h2 Type Zinc Finge		4e-04
2ytg_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
1bbo_A	57	High-Resolution Solution Structure Of The Double Cy		7e-04
2em2_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2eoe_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  141 bits (356), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 95/163 (58%)
Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICK 124
           + C  C K F+    L  H R HTGEKP++C  CGKSFS +  L+ H   H G KP+ C 
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81
Query: 125 QCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDK 184
           +CG +F+Q++ LR H+  H   + +AC  C   F+  + L+ HQR+H G KP++C  C K
Sbjct: 82  ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGK 141
Query: 185 TFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
           +F+R+  +  H   H G +PY C  C K+F    +LN H+ +H
Sbjct: 142 SFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           +  A+  G KP+ C +CG +F++   L  H+  H   + + C  C   F+ K DL RHQR
Sbjct: 11  AQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQR 70
Query: 170 SHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKT 229
           +H G KP++C  C K+F+++  ++ H   H G +PY+C  C K+F     L  H+ +H T
Sbjct: 71  THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTH-T 129
Query: 230 SADPISSAKGSKLF 243
              P    +  K F
Sbjct: 130 GEKPYKCPECGKSF 143

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 48/83 (57%)
Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICK 124
           + C  C K F+   +L+ H R HTGEKP++C  CGKSFSQ   L  H   H G KP+ C 
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCP 64
Query: 125 QCGHAFTQKSQLRLHEMRHGNIR 147
           +CG +F++   L  H+  H N +
Sbjct: 65  ECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 119 KPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFR 178
           KP+ C +CG +F+Q S L+ H+  H   + + C  C   F+  SDLQ+HQR+H G KP++
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYK 62
Query: 179 CEYCDKTFTRQIIMKEHLNRHK 200
           C  C K+F+R     +HL+RH+
Sbjct: 63  CPECGKSFSRS----DHLSRHQ 80

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 175 KPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPI 234
           KP++C  C K+F++   +++H   H G +PY C  C K+F  +  L KH+ +H T   P 
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTH-TGEKPY 61
Query: 235 SSAKGSKLF 243
              +  K F
Sbjct: 62  KCPECGKSF 70

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 45/82 (54%)
Query: 92  PFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFAC 151
           P +C VCGK FS++  L +H+  H GVKP+ CK C +A    S L  H   H + R F C
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67
Query: 152 NVCPFKFTTKSDLQRHQRSHEG 173
            +CP+     S L  H RSH G
Sbjct: 68  QICPYASRNSSQLTVHLRSHTG 89

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 40/85 (47%)
Query: 151 CNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC 210
           C VC   F+ K  L+ H R H GVKP++C+ CD        + +HL  H   +P+ C  C
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70
Query: 211 DKTFFDAQSLNKHKLSHKTSADPIS 235
                ++  L  H  SH   + P S
Sbjct: 71  PYASRNSSQLTVHLRSHTGDSGPSS 95

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICK 124
           F C +C K F    +L TH  IH+  +P+ C  CGK F Q+  +  H  +H G KPH C+
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 125 QCGHAFTQKSQLRLHEMRH 143
            CG AF+Q S L  H  +H
Sbjct: 62  VCGKAFSQSSNLITHSRKH 80

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 123 CKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYC 182
           CK CG +F + S L  H + H + R + C  C  +F  KSD+++H   H G KP +C+ C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 183 DKTFTRQIIMKEHLNRHKG 201
            K F++   +  H  +H G
Sbjct: 64  GKAFSQSSNLITHSRKHTG 82

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 33  QQKSLAC--NICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGE 90
           + +++AC    C+ +F D   + KH+  H       C  C K F     LK H  +HTGE
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTHGPR-VHVCAECGKAFVESSKLKRHQLVHTGE 60
Query: 91  KPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICK--QCGHAFTQKSQLRLHEMRHGNI 146
           KPF+C+   CGK FS    L +H+ +H G +P++C    C   F Q + L+ H + H   
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA 120
Query: 147 R 147
           +
Sbjct: 121 K 121

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 98  CGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV--CP 155
           C K F     +  HL  H G + H+C +CG AF + S+L+ H++ H   + F C    C 
Sbjct: 13  CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71
Query: 156 FKFTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRH 199
            +F+   +L+ H R H G +P+ C +  C+K F +   +K H+  H
Sbjct: 72  KRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSV--CGKSFSQRGILSSHLAVHAGVKP 120
           F C    C K +  +  L+ HSR HTGEKP++C    C + FS+   L  H   H GVKP
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 121 HICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV--CPFKFTTKSDLQRHQRSH 171
             CK C   F++   L+ H   H   + F+C    C  KF    +L RH   H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 119 KPHICKQ--CGHAFTQKSQLRLHEMRHGNIRHFACNV--CPFKFTTKSDLQRHQRSHEGV 174
           +P +C    C   + + S L++H  +H   + + C+   C  +F+    L+RHQR H GV
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64
Query: 175 KPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH--CDKTFFDAQSLNKH 223
           KPF+C+ C + F+R   +K H   H G +P+SC    C K F  +  L +H
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHI 122
           + C V  C + F+   +L TH RIHTG+KPF+C +C ++FSQ+  L++H+  H G KP  
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFA 64
Query: 123 CKQCGHAF 130
           C  CG  F
Sbjct: 65  CDICGRKF 72

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 90  EKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIR 147
           E+P+ C V  C + FSQ+  L +H+ +H G KP  C+ C   F+Q++ L  H   H   +
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEK 61
Query: 148 HFACNVCPFKFTTKSDLQRHQRSH 171
            FAC++C  KF T     RH + H
Sbjct: 62  PFACDICGRKFATLHTRTRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQP 204
           R +AC V  C  +F+ K++L  H R H G KPF+C  C + F++Q  +  H+  H G +P
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKP 62
Query: 205 YSCSHCDKTFFDAQSLNKHKLSHKTSAD 232
           ++C  C + F    +  +H   H    D
Sbjct: 63  FACDICGRKFATLHTRTRHTKIHLRQKD 90

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHI 122
           + C V  C + F++  +L  H RIHTG+KPF+C +C ++FS+   L++H+  H G KP  
Sbjct: 5   YACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 123 CKQCGHAFTQKSQLRLH 139
           C  CG  F +  + + H
Sbjct: 65  CDICGRKFARSDERKRH 81

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQP 204
           R +AC V  C  +F+  S+L RH R H G KPF+C  C + F+R   +  H+  H G +P
Sbjct: 3   RPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 205 YSCSHCDKTFFDAQSLNKHKLSHKTSAD 232
           ++C  C + F  +    +H   H    D
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHI 122
           + C V  C + F+   SL  H RIHTG+KPF+C +C ++FS+   L++H+  H G KP  
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 123 CKQCGHAFTQKSQLRLH 139
           C  CG  F +  + + H
Sbjct: 65  CDICGRKFARSDERKRH 81

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQP 204
           R +AC V  C  +F+    L RH R H G KPF+C  C + F+R   +  H+  H G +P
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 205 YSCSHCDKTFFDAQSLNKHKLSHKTSAD 232
           ++C  C + F  +    +H   H    D
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHI 122
           + C V  C + F+   +L TH RIHTG+KPF+C +C ++FSQ   L+ H+  H G KP  
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFA 64
Query: 123 CKQCGHAF 130
           C  CG  F
Sbjct: 65  CDICGRKF 72

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 90  EKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIR 147
           E+P+ C V  C + FSQ+  L +H+ +H G KP  C+ C   F+Q + L  H   H   +
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 148 HFACNVCPFKFTTKSDLQRHQRSH 171
            FAC++C  KF T     RH + H
Sbjct: 62  PFACDICGRKFATLHTRDRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQP 204
           R +AC V  C  +F+ K++L  H R H G KPF+C  C + F++   + +H+  H G +P
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKP 62
Query: 205 YSCSHCDKTFFDAQSLNKHKLSHKTSAD 232
           ++C  C + F    + ++H   H    D
Sbjct: 63  FACDICGRKFATLHTRDRHTKIHLRQKD 90

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 91  KPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQ--CGHAFTQKSQLRLHEMRHGNI 146
           K + CS   CG ++++   L +HL  H G KP  CK+  C   FT    L  H + H   
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSHEGVK--PFRC--EYCDKTFTRQIIMKEHLNRHK 200
           ++F C+   C  +FTTK+++++H      +K   + C  E C K F +   +K H   H 
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT 130
Query: 201 GVQPYSCSH--CDKTFFDAQSLNKHKLSH 227
              PY C H  CDK F     L +H+  H
Sbjct: 131 QQLPYECPHEGCDKRFSLPSRLKRHEKVH 159

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHI 122
           + C V  C + F+    L  H RIHTG+KPF+C +C ++FS+   L++H+  H G KP  
Sbjct: 5   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 123 CKQCGHAFTQKSQLRLH 139
           C  CG  F +  + + H
Sbjct: 65  CDICGRKFARSDERKRH 81

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQP 204
           R +AC V  C  +F+   +L RH R H G KPF+C  C + F+R   +  H+  H G +P
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 205 YSCSHCDKTFFDAQSLNKHKLSHKTSAD 232
           ++C  C + F  +    +H   H    D
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHI 122
           + C V  C + F+    L  H RIHTG+KPF+C +C ++FS+   L++H+  H G KP  
Sbjct: 5   YACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 123 CKQCGHAFTQKSQLRLH 139
           C  CG  F +  + + H
Sbjct: 65  CDICGRKFARSDERKRH 81

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQP 204
           R +AC V  C  +F+  +DL RH R H G KPF+C  C + F+R   +  H+  H G +P
Sbjct: 3   RPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 205 YSCSHCDKTFFDAQSLNKHKLSHKTSAD 232
           ++C  C + F  +    +H   H    D
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHI 122
           + C V  C + F+    L  H RIHTG+KPF+C +C ++FS+   L++H+  H G KP  
Sbjct: 5   YACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 123 CKQCGHAFTQKSQLRLH 139
           C  CG  F +  + + H
Sbjct: 65  CDICGRKFARSDERKRH 81

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQP 204
           R +AC V  C  +F+  ++L RH R H G KPF+C  C + F+R   +  H+  H G +P
Sbjct: 3   RPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 205 YSCSHCDKTFFDAQSLNKHKLSHKTSAD 232
           ++C  C + F  +    +H   H    D
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHI 122
           + C V  C + F+    L  H RIHTG+KPF+C +C ++FS+   L++H+  H G KP  
Sbjct: 4   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 63
Query: 123 CKQCGHAFTQKSQLRLH 139
           C  CG  F +  + + H
Sbjct: 64  CDICGRKFARSDERKRH 80

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQP 204
           R +AC V  C  +F+   +L RH R H G KPF+C  C + F+R   +  H+  H G +P
Sbjct: 2   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 61
Query: 205 YSCSHCDKTFFDAQSLNKHKLSH 227
           ++C  C + F  +    +H   H
Sbjct: 62  FACDICGRKFARSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHI 122
           + C V  C + F+    L  H RIHTG+KPF+C +C ++FS+   L++H+  H G KP  
Sbjct: 5   YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 123 CKQCGHAFTQKSQLRLH 139
           C  CG  F +  + + H
Sbjct: 65  CDICGRKFARSDERKRH 81

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQP 204
           R +AC V  C  +F+   +L RH R H G KPF+C  C + F+R   +  H+  H G +P
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 205 YSCSHCDKTFFDAQSLNKHKLSH 227
           ++C  C + F  +    +H   H
Sbjct: 63  FACDICGRKFARSDERKRHTKIH 85

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 66  TCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGV--KPHIC 123
            C +C K+F ++  L  H   H+GEKP+ C VCG  F ++  +S H+  H G   KP+IC
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 124 KQCGHAFTQKSQLRLH 139
           + CG  F++   L  H
Sbjct: 69  QSCGKGFSRPDHLNGH 84

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 150 ACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV--QPYSC 207
           AC +C   F     L RH+ SH G KP+ C  C   F R+  M  H+  H G   +PY C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 208 SHCDKTFFDAQSLNKH 223
             C K F     LN H
Sbjct: 69  QSCGKGFSRPDHLNGH 84

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 61  TLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKP 120
           T  +F C  C + F    +L  H R HT E+P+ C +C K+F ++  L  H  +H+  KP
Sbjct: 14  TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP 73
Query: 121 HICKQCGHAFTQKSQLRLHEMRH 143
             C++CG  F Q   L +H+  H
Sbjct: 74  FKCQECGKGFCQSRTLAVHKTLH 96

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 147 RHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYS 206
           + F C  C   FT   +L  H+R+H   +P+ C+ C K F RQ  +++H   H   +P+ 
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK 75
Query: 207 CSHCDKTFFDAQSLNKHKLSHKTSADPISSA 237
           C  C K F  +++L  HK  H  ++ P +++
Sbjct: 76  CQECGKGFCQSRTLAVHKTLHMQTSSPTAAS 106

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 88  TGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIR 147
           +G     C  C K F  +  L  H   H G KP  C +CG  + +K  L  HE R+   R
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62
Query: 148 H---FACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHL 196
               F C+VC   F  + +L+ H  SH G  P++C  C + F ++  ++ H+
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 151 CNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRH---KGVQPYSC 207
           C  C  KF +K  L+ H R H G KPF C  C K + R+  + EH  R+   +  Q ++C
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69
Query: 208 SHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF 243
           S C +TF     L  H +SH T   P   +  S+ F
Sbjct: 70  SVCQETFRRRMELRLHMVSH-TGEMPYKCSSCSQQF 104

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 70  CKKVFNNIKSLKTHSRIHTGEKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQCG 127
           C KV+     LK H R HTGEKP++C+   C   F++   L+ H   H G KP  C  C 
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 128 HAFTQKSQLRLHEMRHGN 145
            +F++   L LH  RH N
Sbjct: 83  RSFSRSDHLALHMKRHQN 100

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 30/116 (25%)
Query: 85  RIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHG 144
           RIH  + P     C K +++   L +HL  H G KP+ C   G                 
Sbjct: 14  RIHYCDYP----GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEG----------------- 52
Query: 145 NIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK 200
                    C ++F    +L RH R H G KPF+C  C+++F+R   +  H+ RH+
Sbjct: 53  ---------CDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 154 CPFKFTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQPYSCSHCD 211
           C   +T  S L+ H R+H G KP++C +  CD  F R   +  H  +H G +P+ C  C+
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 212 KTFFDAQSLNKHKLSHK 228
           ++F  +  L  H   H+
Sbjct: 83  RSFSRSDHLALHMKRHQ 99

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 70  CKKVFNNIKSLKTHSRIHTGEKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQCG 127
           C K +     LK H R HTGEKP+ C    CG  F++   L+ H   H G +P  C++C 
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 128 HAFTQKSQLRLHEMRH 143
            AF++   L LH  RH
Sbjct: 73  RAFSRSDHLALHMKRH 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 98  CGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFK 157
           CGK++++   L +HL  H G KP+ C   G                          C +K
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDG--------------------------CGWK 46
Query: 158 FTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRH 199
           F    +L RH R H G +PF+C+ CD+ F+R   +  H+ RH
Sbjct: 47  FARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 154 CPFKFTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQPYSCSHCD 211
           C   +T  S L+ H R+H G KP+ C++  C   F R   +  H  +H G +P+ C  CD
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 212 KTFFDAQSLNKHKLSH 227
           + F  +  L  H   H
Sbjct: 73  RAFSRSDHLALHMKRH 88

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 70  CKKVFNNIKSLKTHSRIHTGEKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQCG 127
           C K +     LK H R HTGEKP+ C    CG  F++   L+ H   H G +P  C++C 
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 128 HAFTQKSQLRLHEMRH 143
            AF++   L LH  RH
Sbjct: 74  RAFSRSDHLALHMKRH 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 98  CGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFK 157
           CGK++++   L +HL  H G KP+ C   G                          C +K
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDG--------------------------CGWK 47
Query: 158 FTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRH 199
           F    +L RH R H G +PF+C+ CD+ F+R   +  H+ RH
Sbjct: 48  FARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 154 CPFKFTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQPYSCSHCD 211
           C   +T  S L+ H R+H G KP+ C++  C   F R   +  H  +H G +P+ C  CD
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 212 KTFFDAQSLNKHKLSH 227
           + F  +  L  H   H
Sbjct: 74  RAFSRSDHLALHMKRH 89

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 64  KFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKP 120
           ++ C  C K F++   L  H R HTGEKP++C  CGK+F QR  L  H  VH G  P
Sbjct: 18  RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 140 EMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRH 199
           E +    R + C+ C   F+  SDL +H+R+H G KP++C+ C K F ++  +  H   H
Sbjct: 10  EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69
Query: 200 KGVQPYS 206
            G  P S
Sbjct: 70  TGSGPSS 76

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 88  TGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIR 147
           +G+K + C  CGKSF+ +     H+++H G++P+ C  CG  F  K  L  H   H  I+
Sbjct: 6   SGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64
Query: 148 HFACNVCPFKFTTKSDLQRH----QRSHEGVK 175
            + CN+C  +F  +    RH     +S+E  K
Sbjct: 65  PYECNICAKRFMWRDSFHRHVTSCTKSYEAAK 96

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 154 CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKT 213
           C   FT KS   RH   H G++P+ C  C K F  +  +  H+  H G++PY C+ C K 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 214 FFDAQSLNKHKLS 226
           F    S ++H  S
Sbjct: 75  FMWRDSFHRHVTS 87

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKP 120
           + C  C+  F    +L +H  +HTGEKP+RC++CG  F++   L +H  +H+G KP
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 149 FACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQP 204
           + C+ C   F  K +L  H+  H G KP+RC  C   F R   +K H   H G +P
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 34/54 (62%)
Query: 90  EKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
           EKP+ C  CGK+FS+  IL  H  VH G KP+ C +CG AF+Q S L  H+  H
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 175 KPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSAD 232
           KP+ C  C K F+R  I+ +H   H G +PY C  C K F     L  H+  H +   
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS 70

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 46  FCDEIVLNKHVEEHSTLGKFTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRC--SVCGKS 101
           F  + +L  H+  H+      CT   C+K ++ +++LKTH R HTGEKP+ C    C K+
Sbjct: 49  FKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKA 108
Query: 102 FSQRGILSSHL-AVHAGVKPHICK--QCGHAFTQKSQLRLH 139
           FS     + H    H+  KP++CK   C   +T  S LR H
Sbjct: 109 FSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKH 149

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 126 CGHAFTQKSQLRLH---EMRHGNIRHFACN-------VCPFKFTTKSDLQRHQRSHEGVK 175
           C   F  + QL  H   E  HG  + F C+       + PFK   +  L  H R H G K
Sbjct: 9   CSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFK--AQYMLVVHMRRHTGEK 66
Query: 176 PFRC--EYCDKTFTRQIIMKEHLNRHKGVQPYSCSH--CDKTFFDAQSLNKHKLSHKTSA 231
           P +C  E C K+++R   +K HL  H G +PY C H  C K F +A    KH+    ++ 
Sbjct: 67  PHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE 126
Query: 232 DPI 234
            P 
Sbjct: 127 KPY 129

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 39  CNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVC 98
           C +C   +     L +H   HS   K+ C  C+KVF   +    H   HTGE+ ++C  C
Sbjct: 25  CIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLAC 84
Query: 99  GKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQL-RLHEMRHGNIRHFA 150
           GKSF     +SSH+       P          +  S+L RLH  R   IR +A
Sbjct: 85  GKSFINYQFMSSHIKSVHSQDP----------SGDSKLYRLHPCRSLQIRQYA 127

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 148 HFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC 207
           ++ C VC   +   + L+RH   H   K + C YC+K F       +H   H G + Y C
Sbjct: 22  YYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQC 81
Query: 208 SHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKL 242
             C K+F + Q ++ H +    S DP   +K  +L
Sbjct: 82  LACGKSFINYQFMSSH-IKSVHSQDPSGDSKLYRL 115

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLA-VHAG 117
           F C VC + F   + LK H R HT EKP+ C +C ++F++R +L  H   +H+G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 149 FACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEH 195
           F C VC   F  +  L+RH RSH   KP+ C  C++ FTR+ ++  H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 91  KPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQ--CGHAFTQKSQLRLHEMRHGNI 146
           K + CS   CG ++++   L +HL+ H G KP  CK+  C   FT    L  H + H   
Sbjct: 2   KRYICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 61
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSHEGVK 175
           ++F C+   C  +FTTK+++++H      +K
Sbjct: 62  KNFTCDSDGCDLRFTTKANMKKHFNRFHNIK 92

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 62  LGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQ 104
           +  F C +C + F+    L TH R HTGEKPF C +CG+ F++
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFAR 43

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 91  KPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHF 149
           KPF+C +C ++FS+   L++H+  H G KP  C  CG  F +  + +    RH +I+H 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK----RHRDIQHI 56

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 62  LGKFTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHA 116
           +  + C V  C + F+    L  H RIHTG+KPF+C +C ++FS+   L++H+  H 
Sbjct: 17  MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 146 IRHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRH 199
           +R +AC V  C  +F+   +L RH R H G KPF+C  C + F+R   +  H+  H
Sbjct: 17  MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 41/143 (28%)
Query: 70  CKKVFNNIKSLKTHSRI-HTGEKPFRCSVC--------GKSFSQRGILSSHLAVHAGVKP 120
           C + F+ +  L TH  + H G       VC        GKSF  +  L +H+ VH G KP
Sbjct: 31  CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKP 90
Query: 121 HIC--KQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFR 178
             C    CG  F +   L++                            H+R+H G KPF+
Sbjct: 91  FPCPFPGCGKIFARSENLKI----------------------------HKRTHTGEKPFK 122
Query: 179 CEY--CDKTFTRQIIMKEHLNRH 199
           CE+  CD+ F      K+H++ H
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVH 145

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 158 FTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQPYSCSH--CDKT 213
           F  K  L  H R H G KPF C +  C K F R   +K H   H G +P+ C    CD+ 
Sbjct: 72  FKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRR 131
Query: 214 FFDAQSLNKHKLSHKTSADPISSA 237
           F ++    KH   H +     SS 
Sbjct: 132 FANSSDRKKHMHVHTSDKSGPSSG 155

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 29/55 (52%)
Query: 89  GEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
           G     CS CGK F     L+ HL  H G KP+ C+ C +A  QK+ LR H  RH
Sbjct: 1   GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH 55

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 151 CNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRH 199
           C+ C   F +   L  H R+H G KP++CE+C+    ++  ++ HL RH
Sbjct: 7   CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH 55

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 90  EKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGN 145
           E+PF C+ CGK++     LS H   H G +P  C +CG  F  +S++  H   H N
Sbjct: 2   ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQN 57

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 175 KPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKT 229
           +PF C +C KT+     +  H   H G +P SC  C K F D   +N+H   H+ 
Sbjct: 3   RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQN 57

>pdb|2ENA|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 311- 343) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 22/33 (66%)
Query: 88  TGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKP 120
           T EKPFRC  C KSF QR  L+SH  +H G KP
Sbjct: 8   TAEKPFRCDTCDKSFRQRSALNSHRMIHTGEKP 40

>pdb|2YTA|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 3 In Zinc Finger Protein 32 Length = 41

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 88  TGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKP 120
           +GEKP++C  CGKSFSQRG L+ H  +H G  P
Sbjct: 6   SGEKPYQCKECGKSFSQRGSLAVHERLHTGSGP 38

>pdb|2EN6|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 887- 919) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 90  EKPFRCSVCGKSFSQRGILSSHLAVHAGVKP 120
           EKP+ C+ CGK+FSQ+ ILS+H   H G KP
Sbjct: 10  EKPYGCNECGKTFSQKSILSAHQRTHTGEKP 40

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 79  SLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVK----PHICKQCGHAFTQKS 134
           S  +  R HTGEKP+ CS C K+F Q+ +L  H   +          +C +CG  FT+++
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 135 QLRLH 139
            +  H
Sbjct: 62  TMARH 66

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQ----PYSCSHCDKTFFDAQSLNKH 223
           R+H G KP+ C +CDKTF ++ ++  H  R+         + CS C KTF    ++ +H
Sbjct: 8   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66

>pdb|2EML|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 752- 784) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 90  EKPFRCSVCGKSFSQRGILSSHLAVHAGVKP 120
           EKP+ CSVCGK+FS R  LS H  +H+G KP
Sbjct: 10  EKPYECSVCGKAFSHRQSLSVHQRIHSGKKP 40

>pdb|2YTB|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 5 In Zinc Finger Protein 32 Length = 42

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 90  EKPFRCSVCGKSFSQRGILSSHLAVHAGVKP 120
           EKP+RC  CGK+FSQ+G L  H+ VH G  P
Sbjct: 9   EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39

>pdb|2YRJ|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (781- 813) From Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 90  EKPFRCSVCGKSFSQRGILSSHLAVHAGVKP 120
           EKP+RC  CGK+F+Q+  L+ H  +H G KP
Sbjct: 10  EKPYRCGECGKAFAQKANLTQHQRIHTGEKP 40

>pdb|2EQ3|A Chain A, Solution Structure Of The 17th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 90  EKPFRCSVCGKSFSQRGILSSHLAVHAGVKP 120
           EKP+ C+ CGK+FS R  L++H A+H G KP
Sbjct: 10  EKPYECNQCGKAFSVRSSLTTHQAIHTGKKP 40

>pdb|2YTG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 369- 401) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 90  EKPFRCSVCGKSFSQRGILSSHLAVHAGVKP 120
           EKPF+C  CGKS++QR  L+ H  VH G KP
Sbjct: 10  EKPFKCGECGKSYNQRVHLTQHQRVHTGEKP 40

>pdb|1BBO|A Chain A, High-Resolution Solution Structure Of The Double Cys2His2 Zinc Finger From The Human Enhancer Binding Protein Mbp-1 Length = 57

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 121 HICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRS 170
           +IC++CG    + S L+ H   H ++R + C  C F F TK +L +H +S
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>pdb|2EM2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 584- 616) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 90  EKPFRCSVCGKSFSQRGILSSHLAVHAGVKP 120
           EKPF+C  CGK+F Q   L+SHL +H G KP
Sbjct: 10  EKPFKCKECGKAFRQNIHLASHLRIHTGEKP 40

>pdb|2EOE|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 508- 540) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 90  EKPFRCSVCGKSFSQRGILSSHLAVHAGVKP 120
           EKP++C+ CGK F+Q   L++H  +H GVKP
Sbjct: 10  EKPYKCNECGKVFTQNSHLANHQRIHTGVKP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	247
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-48
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-44
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-34
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-29
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-35
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-33
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-35
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-26
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-31
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-24
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-31
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-17
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-31
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-26
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-30
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-23
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-29
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-18
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-27
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-25
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-26
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-20
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-26
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-15
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-14
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-26
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-23
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-26
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-24
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-25
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-20
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-17
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-24
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	9e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-06
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-23
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-20
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-23
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-16
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-23
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-15
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-15
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-22
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-16
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-12
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-22
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-16
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-11
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-21
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	7e-19
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-17
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-20
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-16
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-12
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-11
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-18
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-14
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-12
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-18
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-18
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-13
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-18
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-18
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-14
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-10
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	6e-15
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	8e-11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-14
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	7e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-14
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-14
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-14
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-13
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-11
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-13
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-13
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-13
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-13
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-13
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-13
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-13
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-13
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-13
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-13
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-13
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-13
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-13
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-13
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-13
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-13
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-13
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-13
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-13
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-13
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-13
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-13
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-13
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-13
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-13
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-13
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-13
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-13
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-13
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-13
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-13
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-13
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-12
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-12
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-12
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-12
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-12
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-12
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-12
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-12
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-12
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-12
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-12
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-12
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-12
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-12
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-12
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-12
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	8e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	4e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-12
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	6e-12
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	4e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	5e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-11
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	5e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-07
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-10
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	5e-10
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	8e-10
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	9e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	8e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-09
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	5e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-08
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-08
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	9e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	8e-08
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	3e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	1e-05
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	9e-05
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	1e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  156 bits (396), Expect = 5e-48
 Identities = 65/163 (39%), Positives = 95/163 (58%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICK 124
           + C  C K F+    L  H R HTGEKP++C  CGKSFS +  L+ H   H G KP+ C 
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81

Query: 125 QCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDK 184
           +CG +F+Q++ LR H+  H   + +AC  C   F+  + L+ HQR+H G KP++C  C K
Sbjct: 82  ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGK 141

Query: 185 TFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
           +F+R+  +  H   H G +PY C  C K+F    +LN H+ +H
Sbjct: 142 SFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  147 bits (373), Expect = 2e-44
 Identities = 53/154 (34%), Positives = 83/154 (53%)

Query: 74  FNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQK 133
                S    + +  GEKP+ C  CGKSFS+   L+ H   H G KP+ C +CG +F+ K
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 134 SQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMK 193
             L  H+  H   + + C  C   F+ +++L+ HQR+H G KP+ C  C K+F++   ++
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122

Query: 194 EHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
            H   H G +PY C  C K+F    +L+ H+ +H
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  121 bits (306), Expect = 2e-34
 Identities = 51/138 (36%), Positives = 72/138 (52%)

Query: 39  CNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVC 98
           C  C   F D+  L +H   H+    + C  C K F+   +L+ H R HTGEKP+ C  C
Sbjct: 52  CPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPEC 111

Query: 99  GKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKF 158
           GKSFSQ   L +H   H G KP+ C +CG +F+++  L  H+  H   + + C  C   F
Sbjct: 112 GKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSF 171

Query: 159 TTKSDLQRHQRSHEGVKP 176
           + +  L  HQR+H G K 
Sbjct: 172 SRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  107 bits (269), Expect = 5e-29
 Identities = 42/127 (33%), Positives = 67/127 (52%)

Query: 101 SFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTT 160
           S        +  A+  G KP+ C +CG +F++   L  H+  H   + + C  C   F+ 
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61

Query: 161 KSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSL 220
           K DL RHQR+H G KP++C  C K+F+++  ++ H   H G +PY+C  C K+F     L
Sbjct: 62  KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121

Query: 221 NKHKLSH 227
             H+ +H
Sbjct: 122 RAHQRTH 128

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  124 bits (313), Expect = 1e-35
 Identities = 54/172 (31%), Positives = 70/172 (40%), Gaps = 15/172 (8%)

Query: 70  CKKVFNNIKSLKTHSRIHTGEKPFRCS--VCGKSFSQRGILSSHLAVHAGVKPHICKQ-- 125
           C   +N    L+ H   HTGEKPF C    C K F+    L+ H   H G K   C    
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 79

Query: 126 CGHAFTQKSQLRLHEMRH-GN-IRHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRC-- 179
           C   FT K+ ++ H  R     I  + C+   C   F   + L+ HQ SH    P+ C  
Sbjct: 80  CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH 139

Query: 180 EYCDKTFTRQIIMKEHLNRHKGVQ---PYSCSHCDKTFFDAQSLNKHKLSHK 228
           E CDK F+    +K H   H G       SCS   KT+     L      H+
Sbjct: 140 EGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTW--TLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  119 bits (300), Expect = 1e-33
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 12/157 (7%)

Query: 83  HSRIHTGEKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQ--CGHAFTQKSQLRL 138
              +    K + CS   CG ++++   L +HL  H G KP  CK+  C   FT    L  
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 139 HEMRHGNIRHFACN--VCPFKFTTKSDLQRHQRSHEGVK--PFRCEY--CDKTFTRQIIM 192
           H + H   ++F C+   C  +FTTK+++++H      +K   + C +  C K F +   +
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122

Query: 193 KEHLNRHKGVQPYSCSH--CDKTFFDAQSLNKHKLSH 227
           K H   H    PY C H  CDK F     L +H+  H
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 159

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  120 bits (304), Expect = 5e-35
 Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 9/118 (7%)

Query: 87  HTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNI 146
            +G     C  C K F  +  L  H   H G KP  C +CG  + +K  L  H      +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH-EARNCM 60

Query: 147 ----RHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK 200
               + F C+VC   F  + +L+ H  SH G  P++C  C + F +    K+ L  H 
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQ----KKDLQSHM 114

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 99.1 bits (248), Expect = 1e-26
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 3/107 (2%)

Query: 39  CNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSR---IHTGEKPFRC 95
           C  C   F  +  L  H  +H+    F C  C K +   ++L  H     ++  E+ F C
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69

Query: 96  SVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMR 142
           SVC ++F +R  L  H+  H G  P+ C  C   F QK  L+ H ++
Sbjct: 70  SVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK 116

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKH 223
             G     C  C K F  +  +K H  +H G +P+ C  C K +F  ++L +H
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH 54

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  111 bits (280), Expect = 3e-31
 Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 13/152 (8%)

Query: 70  CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPH-------- 121
                  IK   +   I   +       C ++FS    L +H+ +     P         
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 122 -ICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFR 178
             C + G +F  K +L  H   H   + F C    C   F    +L+ H+R+H G KPF+
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 179 CEY--CDKTFTRQIIMKEHLNRHKGVQPYSCS 208
           CE+  CD+ F      K+H++ H   +    S
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 94.7 bits (236), Expect = 1e-24
 Identities = 40/168 (23%), Positives = 47/168 (27%), Gaps = 43/168 (25%)

Query: 25  CMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEH---------STLGKFTCTVCKKVFN 75
           C   +    Q S     C   F     L  HV                   C    K F 
Sbjct: 16  CKWIDEA--QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFK 73

Query: 76  NIKSLKTHSRIHTGEKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHIC--KQCGHAFT 131
               L  H R+HTGEKPF C    CGK F++   L  H   H G KP  C  + C   F 
Sbjct: 74  AKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFA 133

Query: 132 QKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRC 179
                                         SD ++H   H   K    
Sbjct: 134 N----------------------------SSDRKKHMHVHTSDKSGPS 153

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  109 bits (276), Expect = 4e-31
 Identities = 25/101 (24%), Positives = 35/101 (34%)

Query: 79  SLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRL 138
                      +K F C  CG+ F++   L  H   H   +P+ C  C  AF ++  LR 
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 139 HEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRC 179
           H   H   + F C  C   F     L  H+  H        
Sbjct: 64  HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 74.0 bits (183), Expect = 3e-17
 Identities = 22/59 (37%), Positives = 29/59 (49%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +TC +C K F     L+ H  IH+ EKPF+C  CGK F Q   L+ H  +H        
Sbjct: 46  YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 45.9 bits (110), Expect = 5e-07
 Identities = 16/58 (27%), Positives = 22/58 (37%)

Query: 39  CNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
           C+IC   F  +  L  H   HS    F C  C K F   ++L  H  +H        +
Sbjct: 48  CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  111 bits (279), Expect = 6e-31
 Identities = 44/153 (28%), Positives = 63/153 (41%), Gaps = 15/153 (9%)

Query: 90  EKPFRCSVCGKSFSQRGILSSHLA---VHAGVKPHICKQCGH-----AFTQKSQLRLHEM 141
           E   R   C + F  +  L  H+    +H   K  +C   G       F  +  L +H  
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 142 RHGNIRHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLN 197
           RH   +   C    C   ++   +L+ H RSH G KP+ CE+  C K F+      +H N
Sbjct: 61  RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120

Query: 198 R-HKGVQPYSCSH--CDKTFFDAQSLNKHKLSH 227
           R H   +PY C    C K + D  SL KH  + 
Sbjct: 121 RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 99.2 bits (248), Expect = 3e-26
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 15/150 (10%)

Query: 39  CNICSMVFCDEIVLNKHVEE---HSTLGKFTCTVC-----KKVFNNIKSLKTHSRIHTGE 90
            + CS  F  +  L  H+     H    +F C         + F     L  H R HTGE
Sbjct: 6   WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 65

Query: 91  KPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQ--CGHAFTQKSQLRLHEMR-HGN 145
           KP +C+   C KS+S+   L +HL  H G KP++C+   C  AF+  S    H+ R H N
Sbjct: 66  KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125

Query: 146 IRHFACNV--CPFKFTTKSDLQRHQRSHEG 173
            + + C +  C  ++T  S L++H ++  G
Sbjct: 126 EKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  108 bits (273), Expect = 1e-30
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 3/105 (2%)

Query: 84  SRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
           S   +G+K + C  CGKSF+ +     H+++H G++P+ C  CG  F  K  L  H   H
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 144 GNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTR 188
             I+ + CN+C  +F  +     H+      K +     ++  T 
Sbjct: 61  TGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTE 103

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 88.7 bits (221), Expect = 7e-23
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICK 124
           + C VC K F     L  H +IHTG KP+ C++C K F  R     H  V +  K +   
Sbjct: 38  YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAA 95

Query: 125 QCGHAFTQKSQLR 137
           +     T+ S   
Sbjct: 96  KAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 60.1 bits (147), Expect = 5e-12
 Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 39  CNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVC 98
           C +C   F  +  L  H++ H+ +  + C +C K F    S   H  + +  K +  +  
Sbjct: 40  CGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKA 97

Query: 99  GKSFSQRGILSS 110
            ++ ++    SS
Sbjct: 98  EQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 49.0 bits (118), Expect = 5e-08
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 9/63 (14%)

Query: 169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK----GVQPYSCSHCDKTFFDAQSLNKHK 224
               G K + C+ C K+FT     K   +RH     G++PY C  C K F     L  H 
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTH----KSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 57

Query: 225 LSH 227
             H
Sbjct: 58  KIH 60

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  105 bits (265), Expect = 2e-29
 Identities = 35/93 (37%), Positives = 45/93 (48%)

Query: 87  HTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNI 146
                P +C VCGK FS++  L +H+  H GVKP+ CK C +A    S L  H   H + 
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 147 RHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRC 179
           R F C +CP+     S L  H RSH G      
Sbjct: 63  RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 76.3 bits (189), Expect = 3e-18
 Identities = 24/85 (28%), Positives = 37/85 (43%)

Query: 39  CNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVC 98
           C +C   F  +  L  H+  H+ +  + C  C     +  SL  H RIH+ E+PF+C +C
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70

Query: 99  GKSFSQRGILSSHLAVHAGVKPHIC 123
             +      L+ HL  H G      
Sbjct: 71  PYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 55.1 bits (134), Expect = 2e-10
 Identities = 25/58 (43%), Positives = 32/58 (55%)

Query: 170 SHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
           S     P +CE C K F+R+  +K H+  H GV+PY C  CD    D+ SLNKH   H
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH 59

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  101 bits (253), Expect = 2e-27
 Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 7/119 (5%)

Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHI 122
             C    C K+F +  +++ H   H G +   C+ CGK+F +   L  H  VH G KP  
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64

Query: 123 C--KQCGHAFTQKSQLRLHEMRHGNIRHFACNV--CPFKFTTKSDLQRHQRSHEGVKPF 177
           C  + CG  F+    LR H   H   R + C    C  KF   ++L+ H  +H   K  
Sbjct: 65  CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 96.4 bits (241), Expect = 1e-25
 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 90  EKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIR 147
            +   C    C K F     +  HL  H G + H+C +CG AF + S+L+ H++ H   +
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61

Query: 148 HFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQ 203
            F C    C  +F+   +L+ H R H G +P+ C +  C+K F +   +K H+  H   +
Sbjct: 62  PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

Query: 204 PY 205
             
Sbjct: 122 NN 123

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 97.6 bits (244), Expect = 1e-26
 Identities = 25/112 (22%), Positives = 39/112 (34%), Gaps = 32/112 (28%)

Query: 79  SLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAG----VKPHICKQCGHAFTQKS 134
           S  +  R HTGEKP+ CS C K+F Q+ +L  H   +          +C +CG  FT+++
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 135 QLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTF 186
            +                             RH  +  G      E    + 
Sbjct: 62  TMA----------------------------RHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 80.6 bits (200), Expect = 5e-20
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGE----KPFRCSVCGKSFSQRGILSSHLAVHAGVKP 120
           + C+ C K F   + L  H + +         F CS CGK+F++R  ++ H    AG   
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75

Query: 121 HICKQCGHAF 130
              +  G + 
Sbjct: 76  VEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 4/68 (5%)

Query: 164 LQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG----VQPYSCSHCDKTFFDAQS 219
                R+H G KP+ C +CDKTF ++ ++  H  R+         + CS C KTF    +
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 220 LNKHKLSH 227
           + +H  + 
Sbjct: 63  MARHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 57.2 bits (139), Expect = 3e-11
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 4/68 (5%)

Query: 39  CNICSMVFCDEIVLNKHVEEH---STLGK-FTCTVCKKVFNNIKSLKTHSRIHTGEKPFR 94
           C+ C   F  + +L+ H + +   + +   F C+ C K F    ++  H+    G     
Sbjct: 18  CSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE 77

Query: 95  CSVCGKSF 102
               G S 
Sbjct: 78  GENSGPSS 85

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 97.1 bits (243), Expect = 2e-26
 Identities = 33/79 (41%), Positives = 44/79 (55%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICK 124
           F C +C K F    +L TH  IH+  +P+ C  CGK F Q+  +  H  +H G KPH C+
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 125 QCGHAFTQKSQLRLHEMRH 143
            CG AF+Q S L  H  +H
Sbjct: 62  VCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 67.1 bits (165), Expect = 5e-15
 Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 4/77 (5%)

Query: 39  CNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVC 98
           C IC   F     L+ H+  HS    + C  C K F+    +K H+ IHTGEKP +C VC
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 99  GKSFSQRGILSSHLAVH 115
           GK+FSQ    SS+L  H
Sbjct: 64  GKAFSQ----SSNLITH 76

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 64.0 bits (157), Expect = 7e-14
 Identities = 27/79 (34%), Positives = 38/79 (48%)

Query: 149 FACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
           F C +C   F   S L  H   H   +P+ C+YC K F ++  MK+H   H G +P+ C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 209 HCDKTFFDAQSLNKHKLSH 227
            C K F  + +L  H   H
Sbjct: 62  VCGKAFSQSSNLITHSRKH 80

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 97.6 bits (244), Expect = 3e-26
 Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 34/146 (23%)

Query: 88  TGEKPFRCS--VCGKSFSQRGILSSHLAVHAGVKPHIC--KQCGHAFTQKSQLRLHEMRH 143
           + ++PF C+   C K + +   L  H   H G KP+ C  K C   F++           
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSD--------- 52

Query: 144 GNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQ 203
                               L+RHQR H GVKPF+C+ C + F+R   +K H   H G +
Sbjct: 53  -------------------QLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEK 93

Query: 204 PYSCS--HCDKTFFDAQSLNKHKLSH 227
           P+SC    C K F  +  L +H   H
Sbjct: 94  PFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 89.5 bits (223), Expect = 5e-23
 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 4/83 (4%)

Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHI 122
           + C    C++ F+    LK H R HTG KPF+C  C + FS+   L +H   H G KP  
Sbjct: 37  YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFS 96

Query: 123 CK--QCGHAFTQKSQLRLHEMRH 143
           C+   C   F +  +L  H   H
Sbjct: 97  CRWPSCQKKFARSDELVRHHNMH 119

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 96.0 bits (240), Expect = 7e-26
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 2/80 (2%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAG--VKPHI 122
             C +C K+F ++  L  H   H+GEKP+ C VCG  F ++  +S H+  H G   KP+I
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 123 CKQCGHAFTQKSQLRLHEMR 142
           C+ CG  F++   L  H  +
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQ 87

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 91.8 bits (229), Expect = 3e-24
 Identities = 32/115 (27%), Positives = 43/115 (37%), Gaps = 34/115 (29%)

Query: 87  HTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNI 146
            +G     C +CGK F     L+ H   H+G KP+ C  CG  F +              
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKR-------------- 47

Query: 147 RHFACNVCPFKFTTKSDLQRHQRSH--EGVKPFRCEYCDKTFTRQIIMKEHLNRH 199
                         K  +  H RSH     KP+ C+ C K F+R     +HLN H
Sbjct: 48  --------------KDRMSYHVRSHDGSVGKPYICQSCGKGFSR----PDHLNGH 84

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 69.8 bits (172), Expect = 7e-16
 Identities = 28/115 (24%), Positives = 36/115 (31%), Gaps = 38/115 (33%)

Query: 115 HAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGV 174
            +G     C+ CG  F     L                             RH+ SH G 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHL----------------------------NRHKLSHSGE 33

Query: 175 KPFRCEYCDKTFTRQIIMKEHLNRHK------GVQPYSCSHCDKTFFDAQSLNKH 223
           KP+ C  C   F R    K+ ++ H         +PY C  C K F     LN H
Sbjct: 34  KPYSCPVCGLRFKR----KDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGH 84

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 51.3 bits (124), Expect = 5e-09
 Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 8/61 (13%)

Query: 171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRHK----GVQPYSCSHCDKTFFDAQSLNKHKLS 226
             G     CE C K F        HLNRHK    G +PYSC  C   F     ++ H  S
Sbjct: 2   SSGSSGVACEICGKIFRD----VYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS 57

Query: 227 H 227
           H
Sbjct: 58  H 58

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 39 CNICSMVFCDEIVLNKHVEEHS-TLGK-FTCTVCKKVFNNIKSLKTHS-RIHTGEK 91
          C +C + F  +  ++ HV  H  ++GK + C  C K F+    L  H  ++H+G  
Sbjct: 38 CPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 94.5 bits (236), Expect = 3e-25
 Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)

Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHI 122
           + C V  C + F+   SL  H RIHTG+KPF+C +C ++FS+   L++H+  H G KP  
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 123 CKQCGHAFTQKSQLRLHEMRH 143
           C  CG  F +  + + H   H
Sbjct: 65  CDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 81.4 bits (202), Expect = 3e-20
 Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 34/113 (30%)

Query: 90  EKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIR 147
           E+P+ C V  C + FSQ G L+ H+ +H G KP  C+ C   F++               
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSD------------- 48

Query: 148 HFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK 200
                           L  H R+H G KPF C+ C + F R     +   RH 
Sbjct: 49  ---------------HLTTHIRTHTGEKPFACDICGRKFAR----SDERKRHT 82

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 74.4 bits (184), Expect = 1e-17
 Identities = 27/78 (34%), Positives = 38/78 (48%)

Query: 42  CSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKS 101
           C   F     L +H+  H+    F C +C + F+    L TH R HTGEKPF C +CG+ 
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71

Query: 102 FSQRGILSSHLAVHAGVK 119
           F++      H  +H   K
Sbjct: 72  FARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 68.3 bits (168), Expect = 2e-15
 Identities = 23/70 (32%), Positives = 35/70 (50%)

Query: 158 FTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDA 217
           F+    L RH R H G KPF+C  C + F+R   +  H+  H G +P++C  C + F  +
Sbjct: 16  FSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARS 75

Query: 218 QSLNKHKLSH 227
               +H   H
Sbjct: 76  DERKRHTKIH 85

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 92.2 bits (230), Expect = 2e-24
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICK 124
           F C +C + F+    L TH R HTGEKPF C +CG+ F++      H  +   + P +  
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILED 62

Query: 125 QCGHAFTQKSQLRLH 139
           +     ++   L   
Sbjct: 63  KVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 67.5 bits (166), Expect = 4e-15
 Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 7/84 (8%)

Query: 149 FACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQ---PY 205
           F C +C   F+    L  H R+H G KPF C+ C + F R     +   RH+ +Q   P 
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFAR----SDERKRHRDIQHILPI 59

Query: 206 SCSHCDKTFFDAQSLNKHKLSHKT 229
                ++       L       K 
Sbjct: 60  LEDKVEELLSKNYHLENEVARLKK 83

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 53.3 bits (129), Expect = 9e-10
 Identities = 15/54 (27%), Positives = 28/54 (51%)

Query: 174 VKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
           +KPF+C  C + F+R   +  H+  H G +P++C  C + F  +    +H+   
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 12/77 (15%), Positives = 16/77 (20%), Gaps = 33/77 (42%)

Query: 39  CNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVC 98
           C+IC   F             S                    K H  I     P      
Sbjct: 34  CDICGRKFA-----------RSD-----------------ERKRHRDIQH-ILPILEDKV 64

Query: 99  GKSFSQRGILSSHLAVH 115
            +  S+    + HL   
Sbjct: 65  EELLSK----NYHLENE 77

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 89.5 bits (223), Expect = 2e-23
 Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 54  KHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSV--CGKSFSQRGILSSH 111
           K    H          C K +     LK H R HTGEKP+ C    CG  F++   L+ H
Sbjct: 1   KRTATH----TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRH 56

Query: 112 LAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
              H G +P  C++C  AF++   L LH  RH
Sbjct: 57  YRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 80.3 bits (199), Expect = 6e-20
 Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 34/116 (29%)

Query: 87  HTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICK--QCGHAFTQKSQLRLHEMRHG 144
            T       + CGK++++   L +HL  H G KP+ C    CG  F +  +L        
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDEL-------- 53

Query: 145 NIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK 200
                                RH R H G +PF+C+ CD+ F+R     +HL  H 
Sbjct: 54  --------------------TRHYRKHTGHRPFQCQKCDRAFSR----SDHLALHM 85

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 142 RHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRC--EYCDKTFTRQIIMKEHLNRH 199
           +           C   +T  S L+ H R+H G KP+ C  + C   F R   +  H  +H
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 200 KGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
            G +P+ C  CD+ F  +  L  H   H
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 88.7 bits (221), Expect = 3e-23
 Identities = 24/65 (36%), Positives = 34/65 (52%)

Query: 79  SLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRL 138
               HS +   +KP++C  C  SF  +G L+SH  VH G KP+ C  CG  F + + L+ 
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 139 HEMRH 143
           H   H
Sbjct: 64  HTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 70.9 bits (175), Expect = 2e-16
 Identities = 22/57 (38%), Positives = 36/57 (63%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPH 121
           + C  C+  F    +L +H  +HTGEKP+RC++CG  F++   L +H  +H+G KP+
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 64.0 bits (157), Expect = 7e-14
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 108 LSSHLA----VHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSD 163
           +  H      +    KP+ C +C  +F  K  L  H+  H   + + CN+C  +F   ++
Sbjct: 1   MGHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPAN 60

Query: 164 LQRHQRSHEGVKPF 177
           L+ H R H G KP+
Sbjct: 61  LKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 61.3 bits (150), Expect = 7e-13
 Identities = 17/66 (25%), Positives = 26/66 (39%)

Query: 162 SDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLN 221
                H       KP++C+ C  +F  +  +  H   H G +PY C+ C   F    +L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 222 KHKLSH 227
            H   H
Sbjct: 63  THTRIH 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 88.7 bits (221), Expect = 3e-23
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 79  SLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAG--VKPHICKQCGHAFTQKSQL 136
           S  +  R H+GEKP+ C +C   F+Q G +  H+       V    C  C     +KS L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 137 RLHEMRH 143
            +H  + 
Sbjct: 62  GVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 67.5 bits (166), Expect = 3e-15
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 3/60 (5%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGE--KPFRCSVCGKSFSQRGILSSHL-AVHAGVKPH 121
           + C +C   F    ++K H      E    F C  C    +++  L  HL   H+   P 
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 67.5 bits (166), Expect = 3e-15
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 164 LQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG--VQPYSCSHCDKTFFDAQSLN 221
                R+H G KP+ C  C   FT+   MK H+ +     V  + C HCD        L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 222 KH 223
            H
Sbjct: 63  VH 64

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 36.3 bits (85), Expect = 9e-04
 Identities = 8/37 (21%), Positives = 12/37 (32%), Gaps = 4/37 (10%)

Query: 195 HLNRHK----GVQPYSCSHCDKTFFDAQSLNKHKLSH 227
                     G +PY C  C   F  + ++  H L  
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQK 38

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 86.0 bits (214), Expect = 3e-22
 Identities = 25/65 (38%), Positives = 31/65 (47%)

Query: 79  SLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRL 138
           S           + ++C  CGKSFS    LS H   H G KP+ C +CG AF Q+S L  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 139 HEMRH 143
           H   H
Sbjct: 65  HHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 70.5 bits (174), Expect = 2e-16
 Identities = 26/57 (45%), Positives = 32/57 (56%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPH 121
           + C  C K F++   L  H R HTGEKP++C  CGK+F QR  L  H  VH G  P 
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.0 bits (144), Expect = 5e-12
 Identities = 17/67 (25%), Positives = 27/67 (40%)

Query: 161 KSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSL 220
                R +      + ++C+ C K+F+    + +H   H G +PY C  C K F     L
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 221 NKHKLSH 227
             H   H
Sbjct: 63  IGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 22/102 (21%), Positives = 36/102 (35%), Gaps = 28/102 (27%)

Query: 104 QRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSD 163
             G            + + C +CG +F+  S                            D
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSS----------------------------D 33

Query: 164 LQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPY 205
           L +H+R+H G KP++C+ C K F ++  +  H   H G  P 
Sbjct: 34  LSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 85.6 bits (213), Expect = 4e-22
 Identities = 31/64 (48%), Positives = 39/64 (60%)

Query: 80  LKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLH 139
               S IH+GEKP+ C  CGK+FS+  IL  H  VH G KP+ C +CG AF+Q S L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 140 EMRH 143
           +  H
Sbjct: 62  QRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 70.6 bits (174), Expect = 2e-16
 Identities = 23/57 (40%), Positives = 31/57 (54%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPH 121
           + C  C K F+    L  H R+HTGEKP++C  CGK+FSQ   L +H  +H      
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 22/64 (34%), Positives = 28/64 (43%)

Query: 164 LQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKH 223
                  H G KP+ C  C K F+R  I+ +H   H G +PY C  C K F     L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 224 KLSH 227
           +  H
Sbjct: 62  QRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 57.1 bits (139), Expect = 2e-11
 Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 28/98 (28%)

Query: 108 LSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRH 167
            S    +H+G KP+ C +CG AF++ S L                             +H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILV----------------------------QH 33

Query: 168 QRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPY 205
           QR H G KP++C  C K F++   +  H   H      
Sbjct: 34  QRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 85.0 bits (211), Expect = 2e-21
 Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 64  KFTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSV--CGKSFSQRGILSSHLAVHAGVK 119
              C    C KV+     LK H R HTGEKP++C+   C   F++   L+ H   H G K
Sbjct: 15  IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAK 74

Query: 120 PHICKQCGHAFTQKSQLRLHEMRHGN 145
           P  C  C  +F++   L LH  RH N
Sbjct: 75  PFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 78.1 bits (193), Expect = 7e-19
 Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 10/102 (9%)

Query: 101 SFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV--CPFKF 158
           S    G       +H    P     C   +T+ S L+ H   H   + + C    C ++F
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57

Query: 159 TTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK 200
               +L RH R H G KPF+C  C+++F+R     +HL  H 
Sbjct: 58  ARSDELTRHYRKHTGAKPFQCGVCNRSFSR----SDHLALHM 95

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 73.4 bits (181), Expect = 3e-17
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 6/101 (5%)

Query: 74  FNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC--KQCGHAFT 131
             +        RIH  + P     C K +++   L +HL  H G KP+ C  + C   F 
Sbjct: 3   SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58

Query: 132 QKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHE 172
           +  +L  H  +H   + F C VC   F+    L  H + H+
Sbjct: 59  RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 81.8 bits (203), Expect = 1e-20
 Identities = 16/59 (27%), Positives = 22/59 (37%)

Query: 85  RIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
              +   P +CS C  S S +  L  H  +H   +P  C  C     Q S L  H  + 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 69.4 bits (171), Expect = 5e-16
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICK 124
             C+ C    ++  +L+ H RIH  ++PF+C+ C     Q   LS H+    G       
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS--GP 67

Query: 125 QCG 127
             G
Sbjct: 68  SSG 70

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 59.0 bits (144), Expect = 4e-12
 Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 28/96 (29%)

Query: 113 AVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHE 172
           +  +   P  C +C ++ + K+                             L+ H+R H 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKA----------------------------ALRIHERIHC 33

Query: 173 GVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
             +PF+C YC     +   + +H+ +  G      S
Sbjct: 34  TDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 12/59 (20%), Positives = 24/59 (40%)

Query: 169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
            S     P +C  C  + + +  ++ H   H   +P+ C++C        +L+KH    
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 76.4 bits (189), Expect = 1e-18
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 85  RIHTGEKPFRCSVCGKSFSQRGILSSHL--AVHAGVKPHICKQCGHAFTQKSQLRLHEMR 142
               GE  +RC VC + ++       H   +    VK + C  C   FT+K  +  H   
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 143 H 143
            
Sbjct: 63  I 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 64.9 bits (159), Expect = 3e-14
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRI--HTGEKPFRCSVCGKSFSQRGILSSHLAVHAGV 118
           + C VC +V+ +I +   H         K + C  C K F+++  +++H+ +   +
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 10/66 (15%)

Query: 168 QRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK------GVQPYSCSHCDKTFFDAQSLN 221
           + + EG   +RC+ C + +T       +  RH        V+ Y C  C K F    ++ 
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTH----ISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMT 57

Query: 222 KHKLSH 227
            H    
Sbjct: 58  AHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 149 FACNVCPFKFTTKSDLQRHQRS--HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV 202
           + C VC   +T  S+  RH  +     VK + C +C K FTR+  M  H+     +
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 76.7 bits (189), Expect = 1e-18
 Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 3/72 (4%)

Query: 87  HTGEKPFRCSVCGKSFSQRGILSSHLAVH---AGVKPHICKQCGHAFTQKSQLRLHEMRH 143
            +G    +C +CG +  Q+  L+ H   H          C+ CG  F +   +  H  + 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 144 GNIRHFACNVCP 155
                 A     
Sbjct: 62  HPALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 70.1 bits (172), Expect = 4e-16
 Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 3/65 (4%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHT---GEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPH 121
             C +C        SL  H R H        F C  CGK F +   +++H +        
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 122 ICKQC 126
             ++ 
Sbjct: 68  APQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 61.7 bits (150), Expect = 5e-13
 Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 3/77 (3%)

Query: 171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRH---KGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
             G    +CE C  T  ++  +  H  +H        + C  C K F    S+  H+   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 228 KTSADPISSAKGSKLFG 244
             +             G
Sbjct: 62  HPALLLAPQESSGPSSG 78

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 60.9 bits (148), Expect = 1e-12
 Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 149 FACNVCPFKFTTKSDLQRHQRSH---EGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPY 205
             C +C F    K+ L  HQR H        F CE+C K F +   +  H ++       
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 206 SCSHCDK 212
           +      
Sbjct: 68  APQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.2 bits (102), Expect = 3e-06
 Identities = 16/72 (22%), Positives = 20/72 (27%), Gaps = 3/72 (4%)

Query: 35  KSLACNICSMVFCDEIVLNKHVEEHSTLGK---FTCTVCKKVFNNIKSLKTHSRIHTGEK 91
             L C IC      +  LN H  +H+       F C  C K F    S+  H        
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 92  PFRCSVCGKSFS 103
                      S
Sbjct: 66  LLAPQESSGPSS 77

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 75.7 bits (187), Expect = 4e-18
 Identities = 22/79 (27%), Positives = 25/79 (31%), Gaps = 2/79 (2%)

Query: 66  TCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHIC 123
               C K F     LK H   HT + P+ C    C K FS    L  H  VHAG      
Sbjct: 5   HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64

Query: 124 KQCGHAFTQKSQLRLHEMR 142
             C       +    H   
Sbjct: 65  DSCSFVGKTWTLYLKHVAE 83

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 61.9 bits (151), Expect = 6e-13
 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 123 CKQCGHAFTQKSQLRLHEMRHGNIRHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCE 180
            + CG AF + +QL++H+  H     + C    C  +F+  S L+RH++ H G    + +
Sbjct: 6   FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65

Query: 181 YCDKTFTRQIIMKEHLNR 198
            C        +  +H+  
Sbjct: 66  SCSFVGKTWTLYLKHVAE 83

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 7/78 (8%)

Query: 153 VCPFK-----FTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQPY 205
           VC F+     F   + L+ HQ SH    P+ C +  CDK F+    +K H   H G    
Sbjct: 3   VCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCK 62

Query: 206 SCSHCDKTFFDAQSLNKH 223
               C           KH
Sbjct: 63  KDDSCSFVGKTWTLYLKH 80

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 46.1 bits (110), Expect = 3e-07
 Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 2/49 (4%)

Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSH 111
           + C    C K F+    LK H ++H G    +   C        +   H
Sbjct: 32  YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH 80

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 75.3 bits (186), Expect = 5e-18
 Identities = 21/105 (20%), Positives = 32/105 (30%), Gaps = 33/105 (31%)

Query: 87  HTGEKPFRCSV--CGKSFSQRGILSSHL-AVHAGVKPHICKQ--CGHAFTQKSQLRLHEM 141
            +G     C    CG+ FS R  L+ H    H   K   C +  CG +F  K        
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKK------- 54

Query: 142 RHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTF 186
                                 L+ H + H   + + CE+   + 
Sbjct: 55  ---------------------HLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 75.3 bits (186), Expect = 5e-18
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 65  FTCTV--CKKVFNNIKSLKTHSRI-HTGEKPFRCS--VCGKSFSQRGILSSHLAVHAGVK 119
             C    C ++F+N + L  H +  H  +K F C    CGKSF+ +  L  H+ +H+  +
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 120 PHICKQCGHAF 130
            +IC+  G + 
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 13/66 (19%)

Query: 171 HEGVKPFRCEY--CDKTFTRQIIMKEHLNRHK-----GVQPYSCSH--CDKTFFDAQSLN 221
             G     C++  C + F+     +++LN HK       + +SC    C K+F   + L 
Sbjct: 2   SSGSSGMPCDFPGCGRIFSN----RQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLK 57

Query: 222 KHKLSH 227
           +H   H
Sbjct: 58  EHMKLH 63

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 66.7 bits (164), Expect = 4e-15
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHA 116
           F C VC + F   + LK H R HT EKP+ C +C ++F++R      L  HA
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRR----DLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 64.0 bits (157), Expect = 5e-14
 Identities = 17/52 (32%), Positives = 27/52 (51%)

Query: 91  KPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMR 142
           + F C VC ++F+++  L  H   H   KP+ C  C  AFT++  L  H  +
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 53.6 bits (130), Expect = 3e-10
 Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 32/82 (39%)

Query: 119 KPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFR 178
           +  +C+ C  AF ++                              L+RH RSH   KP+ 
Sbjct: 1   RSFVCEVCTRAFARQEH----------------------------LKRHYRSHTNEKPYP 32

Query: 179 CEYCDKTFTRQIIMKEHLNRHK 200
           C  C++ FTR    ++ L RH 
Sbjct: 33  CGLCNRAFTR----RDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 8/54 (14%)

Query: 175 KPFRCEYCDKTFTRQIIMKEHLNRHK----GVQPYSCSHCDKTFFDAQSLNKHK 224
           + F CE C + F R    +EHL RH       +PY C  C++ F     L +H 
Sbjct: 1   RSFVCEVCTRAFAR----QEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 66.1 bits (162), Expect = 6e-15
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHL-AVHAGVKPHICKQCGHAFTQ 132
           +     +  KP+ C  CGK FS+   L+ H+  VH   +PH C+      + 
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 54.9 bits (133), Expect = 8e-11
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 65  FTCTVCKKVFNNIKSLKTHS-RIHTGEKPFRCSVCGKSFSQ 104
           + C  C K F+    L  H  ++HT E+P +C V     S 
Sbjct: 13  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNR-HKGVQPYSCSHCDKTF 214
              S    KP+ C+ C K F+R   +  H+ + H   +P+ C       
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 27/78 (34%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +  +  KP+IC+ CG  F++   L  H                            ++
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHI---------------------------KQ 34

Query: 170 SHEGVKPFRCEYCDKTFT 187
            H   +P +C+      +
Sbjct: 35  VHTSERPHKCQVWVSGPS 52

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 66.3 bits (161), Expect = 3e-14
 Identities = 22/98 (22%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 79  SLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAV--HAGVKPHICKQCG---HAFTQK 133
           S K +  I TG   FRC  C  ++     L+ H+    H     H          +  +K
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 134 SQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSH 171
             L   E +    +   C  C   F +  DL  H    
Sbjct: 66  RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT 103

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.9 bits (108), Expect = 7e-07
 Identities = 18/98 (18%), Positives = 27/98 (27%), Gaps = 5/98 (5%)

Query: 35  KSLACNICSMVFCDEIVLNKHVEE-----HSTLGKFTCTVCKKVFNNIKSLKTHSRIHTG 89
               C  CS  +   + L  H+ E                 +      +SL         
Sbjct: 18  SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDA 77

Query: 90  EKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCG 127
           +K  +C  CG SF     LS H+      +       G
Sbjct: 78  QKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSSG 115

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 4e-14
 Identities = 19/44 (43%), Positives = 23/44 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQ 125
           +     +GEKPF+C  CGK F+Q   L SH  VH G KP     
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 45

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KPF+CE C K FT+   +  H   H G +P   S
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 8e-07
 Identities = 15/32 (46%), Positives = 17/32 (53%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F C  C K F     L +H R+HTGEKP   S
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 6e-14
 Identities = 19/42 (45%), Positives = 23/42 (54%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKPF+C +CGKSF  R  L+ H  VH   KP   
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F C +C K F     L  HS +HT EKP   S
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 6e-07
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 8/46 (17%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK----GVQPYSCS 208
              S  G KPF+C+ C K+F      +  LNRH       +P   S
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCG----RSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 7e-07
 Identities = 15/71 (21%), Positives = 19/71 (26%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP  C  CG +F  +S+L                             RH  
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRL----------------------------NRHSM 33

Query: 170 SHEGVKPFRCE 180
            H   KP    
Sbjct: 34  VHTAEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 63.0 bits (154), Expect = 9e-14
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCG 127
           +     +GEKPF+C  CGK F       SH   H+G KP      G
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP-SSG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G KPF+CE C K F        H   H G +P   S
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCG 99
          F C  C K F       +H R H+GEKP   S  G
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 62.5 bits (153), Expect = 1e-13
 Identities = 19/42 (45%), Positives = 24/42 (57%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKPF+C  CGK FS+R  L+ H  +H G KP   
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 47.5 bits (114), Expect = 4e-08
 Identities = 15/44 (34%), Positives = 20/44 (45%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KPF+C  C K F+R+  +  H   H G +P   S 
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F C  C K F+   +L  H ++HTGEKP   S
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 15/70 (21%), Positives = 21/70 (30%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP  C +CG  F+++S L                              H +
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALN----------------------------VHHK 33

Query: 170 SHEGVKPFRC 179
            H G KP   
Sbjct: 34  LHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 1e-13
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQ 125
           +     TG K F C+ CGK+F+++  LS H  +H G KP     
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 18/72 (25%), Positives = 22/72 (30%), Gaps = 28/72 (38%)

Query: 109 SSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQ 168
            S  +   G K   C +CG AFT+KS L                              HQ
Sbjct: 1   GSSGSSGTGGKHFECTECGKAFTRKSTLS----------------------------MHQ 32

Query: 169 RSHEGVKPFRCE 180
           + H G KP    
Sbjct: 33  KIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 15/44 (34%), Positives = 18/44 (40%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G K F C  C K FTR+  +  H   H G +P   S 
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 16/32 (50%), Positives = 18/32 (56%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F CT C K F    +L  H +IHTGEKP   S
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 1e-13
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     +GEKP++C  CGK + +R  L  H  VH G K    
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G KP++C  C K + R++ +  H   H G +    S
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C K +     L  H R+HTGEK    S
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 63.1 bits (154), Expect = 1e-13
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 78  KSLKTHSRIHTGEKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQ 135
                 + +    +P+ C V  C + FS+   L+ H+ +H G KP  C+ C   F++   
Sbjct: 5   PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64

Query: 136 LRLHEMRH 143
           L  H   H
Sbjct: 65  LTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 56.9 bits (138), Expect = 3e-11
 Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)

Query: 65  FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVH 115
           + C V  C + F+    L  H RIHTG+KPF+C +C ++FS+   L++H+  H
Sbjct: 20  YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 55.0 bits (133), Expect = 2e-10
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 4/73 (5%)

Query: 157 KFTTKSDLQRHQRSHEGVKPFRC--EYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTF 214
           +    ++L  +       +P+ C  E CD+ F+R   +  H+  H G +P+ C  C + F
Sbjct: 2   EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59

Query: 215 FDAQSLNKHKLSH 227
             +  L  H  +H
Sbjct: 60  SRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 53.8 bits (130), Expect = 3e-10
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)

Query: 134 SQLRLHEMRHGNIRHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQII 191
           + L  + +    +R +AC V  C  +F+   +L RH R H G KPF+C  C + F+R   
Sbjct: 7   NNLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64

Query: 192 MKEHLNRH 199
           +  H+  H
Sbjct: 65  LTTHIRTH 72

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 1e-13
 Identities = 19/42 (45%), Positives = 23/42 (54%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     +GEKPF+C  CGK F+Q   L SH  VH G KP   
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 8e-08
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KPF+CE C K FT+   +  H   H G +P   S
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 8e-07
 Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +  +G KP  C++CG  FTQ S                             L  HQR
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSH----------------------------LHSHQR 33

Query: 170 SHEGVKPFRC 179
            H G KP   
Sbjct: 34  VHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 15/32 (46%), Positives = 17/32 (53%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F C  C K F     L +H R+HTGEKP   S
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 1e-13
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGE PF CS CGK F+ +  L  H  +H G +P   
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F C+ C KVF +  +L  H +IHTGE+P   S
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G  PF C  C K FT +  +  H   H G +P   S
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 2e-13
 Identities = 18/42 (42%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +      GEK ++C VCGK FSQ   L +H  VH G KP   
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 4e-07
 Identities = 16/32 (50%), Positives = 20/32 (62%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C VC K F+    L+TH R+HTGEKP   S
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G K ++C+ C K F++   ++ H   H G +P   S
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 2e-13
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGE+P+ C+VCGK+F+ R  L  H  +H G KP   
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 13/44 (29%), Positives = 19/44 (43%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G +P+ C  C K FT +  + +H   H G +P   S 
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS 45

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 8e-07
 Identities = 16/32 (50%), Positives = 20/32 (62%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + CTVC K F +  +L  H +IHTGEKP   S
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 2e-13
 Identities = 17/43 (39%), Positives = 23/43 (53%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICK 124
           +     TGEKP+ C VC K+F+Q+  L+ H   H G KP    
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KP+ C+ C K FT++  + +H   H G +P   S
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C VC K F     L  H + HTGEKP   S
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 2e-13
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     + EKP++C  CGK +++R  L  H  VH G K    
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C K +N   +L  H R+H GEK    S
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 8e-07
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S    KP++CE C K + R++ +  H   H G +    S
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/70 (18%), Positives = 20/70 (28%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +  +  KP+ C+ CG  + ++  L                              HQR
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNL----------------------------DMHQR 33

Query: 170 SHEGVKPFRC 179
            H G K    
Sbjct: 34  VHMGEKTSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 2e-13
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP+RC+ CGK+F+ R  L +H  +H G KP   
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 6e-07
 Identities = 15/44 (34%), Positives = 19/44 (43%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KP+RC  C K FT +  +  H   H G +P   S 
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 9e-07
 Identities = 15/32 (46%), Positives = 19/32 (59%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C K F +  +L TH +IHTGEKP   S
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 2e-13
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEK + C  CGKSFS+   L  H  +H+G KP   
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G K + CK+CG +F++   L                             +H+R
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLL----------------------------KHER 33

Query: 170 SHEGVKPFRC 179
            H G KP   
Sbjct: 34  LHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C K F+    L  H R+H+GEKP   S
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G K + C+ C K+F+R   + +H   H G +P   S
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 61.8 bits (151), Expect = 2e-13
 Identities = 18/44 (40%), Positives = 21/44 (47%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQ 125
           +     TGEKP+ C  CGKSF     L  H  VH+G KP     
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KP+ C+ C K+F     + +H   H G +P   S
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 42.6 bits (101), Expect = 2e-06
 Identities = 18/71 (25%), Positives = 23/71 (32%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ CK+CG +F   S L                             +HQR
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLL----------------------------KHQR 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  VHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 42.2 bits (100), Expect = 3e-06
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C K F     L  H R+H+GEKP   S
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 2e-13
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +      G+K F+C+ C K+F+Q   L+ H  +H G KP   
Sbjct: 2   SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 18/32 (56%), Positives = 18/32 (56%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F C  CKK F    SL  H RIHTGEKP   S
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G K F+C  C KTFT+   +  H   H G +P   S
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 2e-13
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQ 125
           +     +G+KP+ C  C K+F Q G L+ H  VH G +      
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 8e-07
 Identities = 14/71 (19%), Positives = 21/71 (29%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +  +G KP+ CK+C   F Q                               L +H+R
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGH----------------------------LNQHKR 33

Query: 170 SHEGVKPFRCE 180
            H G +     
Sbjct: 34  VHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C+K F  I  L  H R+HTGE+    S
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 5e-06
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 8/47 (17%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK----GVQPYSCS 208
               S  G KP+ C+ C KTF +      HLN+HK    G +    S
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQ----IGHLNQHKRVHTGERSSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 3e-13
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP+RC  CGK+F+Q+  L+ H  +H G KP   
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 14/44 (31%), Positives = 20/44 (45%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KP+RC  C K F ++  + +H   H G +P   S 
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS 45

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 15/32 (46%), Positives = 17/32 (53%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C K F    +L  H RIHTGEKP   S
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 3e-13
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++CS CGKSF+ +  L  H   H G +    
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C  CG +FT KS+LR                             HQ+
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLR----------------------------IHQK 33

Query: 170 SHEGVKPFRC 179
            H G +    
Sbjct: 34  CHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G KP++C  C K+FT +  ++ H   H G +    S
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C+ C K F     L+ H + HTGE+    S
Sbjct: 15 CSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 61.4 bits (150), Expect = 3e-13
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     +GEKP+ C+ CGK+F  + +L  H   HAGV     
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +  +G KP+ C +CG AF  KS                             L  H+R
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSL----------------------------LIVHER 33

Query: 170 SHEGVKPFRC 179
           +H GV     
Sbjct: 34  THAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC 207
               S  G KP+ C  C K F  + ++  H   H GV   S 
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.1 bits (92), Expect = 4e-05
 Identities = 9/29 (31%), Positives = 9/29 (31%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRC 95
          C  C K F     L  H R H G      
Sbjct: 15 CNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 3e-13
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQ 125
           +     +GEKP++CS CGK+F +   L+ H  +H G +P     
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 45

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KP++C  C K F R   + EH   H G +P   S
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C+ C K F+    L  H RIHTG +P   S
Sbjct: 13 YKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 3e-13
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICK 124
                TGEKP+ C+VCGK+F     L+ HL VH         
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          ++C VC K F     L  H R+HT E     S
Sbjct: 13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 7e-07
 Identities = 12/44 (27%), Positives = 15/44 (34%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KP+ C  C K F     + +HL  H        S 
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 61.4 bits (150), Expect = 3e-13
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TG+KPF C+ CGKSF  +G L +H  +H G K    
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 17/32 (53%), Positives = 18/32 (56%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F CT C K F    +L TH RIHTGEK    S
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G KPF C +C K+F  +  +  H   H G +    S
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 16/70 (22%), Positives = 18/70 (25%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP  C  CG +F  K  L                              HQR
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLV----------------------------THQR 33

Query: 170 SHEGVKPFRC 179
            H G K    
Sbjct: 34  IHTGEKSGPS 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 61.4 bits (150), Expect = 3e-13
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TG KP+ CS C K+FS +  L  H   H GVKP   
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 46.8 bits (112), Expect = 8e-08
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  GVKP+ C  C KTF+ +  +  H   H GV+P   S
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   GVKP+ C QC   F+ KSQL +                            HQR
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIV----------------------------HQR 33

Query: 170 SHEGVKPFRC 179
           SH GVKP   
Sbjct: 34  SHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 41.4 bits (98), Expect = 5e-06
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C+ C K F+    L  H R HTG KP   S
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 3e-13
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP+ C+ CGK+F+ R  L  H  +H   KP   
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+IC +CG AFT                             +S+L +HQ+
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTI----------------------------RSNLIKHQK 33

Query: 170 SHEGVKPFRCE 180
            H   KP    
Sbjct: 34  IHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 7e-07
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
              S  G KP+ C  C K FT +  + +H   H   +P   S 
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C K F    +L  H +IHT +KP   S
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 4e-13
 Identities = 15/44 (34%), Positives = 20/44 (45%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQ 125
           +     +GEKP+ C  CGK+F     L  H  +H G KP     
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 14/44 (31%), Positives = 18/44 (40%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KP+ C+YC K F     +  H   H G +P   S 
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 15/32 (46%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C K F     L  H RIHTGEKP   S
Sbjct: 13 YVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +  +G KP++C  CG AF   ++                            L RHQR
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAE----------------------------LVRHQR 33

Query: 170 SHEGVKPFRC 179
            H G KP   
Sbjct: 34  IHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 4e-13
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++C+ CGK F+Q   L  H  +H G KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 6e-08
 Identities = 14/44 (31%), Positives = 19/44 (43%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KP++C  C K FT+   +  H   H G +P   S 
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 15/32 (46%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C KVF     L  H  IHTGEKP   S
Sbjct: 13 YKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 4e-13
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++CS CGK+F+++  L  H   H G +    
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KP++C  C K FTR+  +  H   H G +    S
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 4e-07
 Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C  CG AFT+KS L +                            HQ+
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHI----------------------------HQQ 33

Query: 170 SHEGVKPFRC 179
           SH G +    
Sbjct: 34  SHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C+ C K F     L  H + HTGE+    S
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 4e-13
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGE+P +C+ CGKSF Q   L  H  +H G KP   
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 12/44 (27%), Positives = 19/44 (43%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G +P +C  C K+F +   + +H   H G +P   S 
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 15/32 (46%), Positives = 15/32 (46%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
            C  C K F     L  H RIHTGEKP   S
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 17/71 (23%), Positives = 23/71 (32%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G +PH C +CG +F Q +                             L +HQR
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAH----------------------------LIQHQR 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  IHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 4e-13
 Identities = 19/42 (45%), Positives = 26/42 (61%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     +GEKP+ C+ CGK+FSQ+ ILS+H   H G KP   
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G KP+ C  C KTF+++ I+  H   H G +P   S
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +  +G KP+ C +CG  F+QKS                             L  HQR
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSI----------------------------LSAHQR 33

Query: 170 SHEGVKPFRCE 180
           +H G KP    
Sbjct: 34  THTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C K F+    L  H R HTGEKP   S
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 61.0 bits (149), Expect = 4e-13
 Identities = 18/42 (42%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++C  CGK F  R  L +H  VH G KP   
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 9e-07
 Identities = 15/71 (21%), Positives = 20/71 (28%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C++CG  F                              + DL  H  
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFIC----------------------------RRDLYTHHM 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  VHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G KP++CE C K F  +  +  H   H G +P   S
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C  C K F   + L TH  +HTGEKP   S
Sbjct: 15 CEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 4e-13
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP+ C+ CGKSF Q+  L+ H  +H G KP   
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 8/46 (17%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK----GVQPYSCS 208
              S  G KP+ C  C K+F +    K HLNRH+    G +P   S
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQ----KSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 15/32 (46%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C K F     L  H RIHTGEKP   S
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 61.0 bits (149), Expect = 4e-13
 Identities = 16/39 (41%), Positives = 19/39 (48%)

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPH 121
            S    GEKP+ C +CG  F     L SHL +H G  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 15/40 (37%), Positives = 17/40 (42%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYS 206
              S  G KP+ CE C   F     +K HL  H G  P S
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
          + C +C   F ++++LK+H RIHTG  P 
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 4e-13
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKPF+C  CGKS++QR  L+ H  VH G KP   
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 4e-08
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KPF+C  C K++ +++ + +H   H G +P   S 
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 15/32 (46%), Positives = 17/32 (53%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F C  C K +N    L  H R+HTGEKP   S
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 4e-13
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGE+ + CS CGK+F Q+  LS H  +H G KP   
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
              S  G + + C  C K F ++  +  H   H+G +P   S 
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 7e-07
 Identities = 18/70 (25%), Positives = 22/70 (31%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G + + C +CG AF QKS L                              HQR
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLS----------------------------MHQR 33

Query: 170 SHEGVKPFRC 179
            H G KP   
Sbjct: 34  IHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C+ C K F    +L  H RIH GEKP   S
Sbjct: 15 CSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 4e-13
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     +GEKP++C+ CGK F+Q   L++H  +H G KP   
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 5e-08
 Identities = 14/44 (31%), Positives = 19/44 (43%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KP++C  C K FT+   +  H   H G +P   S 
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 16/30 (53%), Positives = 16/30 (53%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C  C KVF     L  H RIHTGEKP   S
Sbjct: 15 CNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 61.0 bits (149), Expect = 5e-13
 Identities = 19/42 (45%), Positives = 24/42 (57%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKPF C+ CGKSFS    L++H  +H G KP   
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 46.3 bits (111), Expect = 1e-07
 Identities = 14/44 (31%), Positives = 18/44 (40%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KPF C  C K+F+    +  H   H G +P   S 
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 44.0 bits (105), Expect = 7e-07
 Identities = 18/71 (25%), Positives = 22/71 (30%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP  C +CG +F+  SQL                              HQR
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLA----------------------------THQR 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  IHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 17/32 (53%), Positives = 18/32 (56%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F C  C K F+    L TH RIHTGEKP   S
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 60.7 bits (148), Expect = 5e-13
 Identities = 20/39 (51%), Positives = 24/39 (61%)

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPH 121
            S    GEKP+RC  CGK+FSQ+G L  H+ VH G  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.6 bits (101), Expect = 2e-06
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 111 HLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
                 G KP+ C QCG AF+QK  L +H   H
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYS 206
              S  G KP+RC+ C K F+++  +  H+  H G  P S
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.7 bits (91), Expect = 5e-05
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
          + C  C K F+   SL  H R+HTG  P 
Sbjct: 12 YRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 5e-13
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     +GEKPF+C  CGK+F Q   L+SHL +H G KP   
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KPF+C+ C K F + I +  HL  H G +P   S
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 16/32 (50%), Positives = 17/32 (53%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F C  C K F     L +H RIHTGEKP   S
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 6e-13
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TG+KP++C+ CGK F+Q   L+ H  +H G KP   
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 8/47 (17%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK----GVQPYSCSH 209
              S  G KP++C  C K FT+      HL RH+    G +P   S 
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQ----NSHLARHRGIHTGEKPSGPSS 45

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 15/32 (46%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C KVF     L  H  IHTGEKP   S
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 6e-13
 Identities = 18/42 (42%), Positives = 26/42 (61%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++C+ CGK F+Q   L++H  +H GVKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KP++C  C K FT+   +  H   H GV+P   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 15/32 (46%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C KVF     L  H RIHTG KP   S
Sbjct: 13 YKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 60.6 bits (148), Expect = 6e-13
 Identities = 19/42 (45%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP+ C  CGK+FSQ   L  H  VH G KP   
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 13/44 (29%), Positives = 20/44 (45%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KP+ C+ C K F++   + +H   H G +P   S 
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ CK+CG AF+Q +                             L +HQR
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTH----------------------------LIQHQR 33

Query: 170 SHEGVKPFRC 179
            H G KP   
Sbjct: 34  VHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C K F+    L  H R+HTGEKP   S
Sbjct: 13 YECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 6e-13
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKPF CS C K+F+ +  L  H   H G KP   
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KPF C  C K F  +  +  H   H G +P   S
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 9e-07
 Identities = 16/32 (50%), Positives = 19/32 (59%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F C+ C+K FN   +L  H R HTGEKP   S
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 7e-13
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++C VC KSF     L+ H  +H G KP   
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 17/30 (56%), Positives = 17/30 (56%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C VC K F    SL  H RIHTGEKP   S
Sbjct: 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G KP++C+ C K+F     +  H   H G +P   S
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 7e-13
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGE+ + CS CGK+F+++  L  H  +H G KP   
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 12/44 (27%), Positives = 17/44 (38%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G + + C  C K F R+  +  H   H G +P   S 
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 15/32 (46%), Positives = 18/32 (56%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C+ C K F    +L  H RIHTGEKP   S
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 8e-13
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++C+ CGK F+Q   L+ H  +H G KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
              S  G KP++C  C K FT+   +  H   H G +P   S 
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 15/32 (46%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C KVF     L  H  IHTGEKP   S
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 9e-13
 Identities = 18/43 (41%), Positives = 25/43 (58%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICK 124
           +     TGEKP+ CS+CGKSF+++  L  H  +H G KP    
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 8e-08
 Identities = 14/44 (31%), Positives = 20/44 (45%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KP+ C  C K+FT++  +  H   H G +P   S 
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 7e-07
 Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C  CG +FT+KSQL +                            HQ+
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHV----------------------------HQQ 33

Query: 170 SHEGVKPFRC 179
            H G KP   
Sbjct: 34  IHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C++C K F     L  H +IHTGEKP   S
Sbjct: 15 CSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 1e-12
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++C  CGK ++ +  L  H  VH G +P   
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 9e-07
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C K +N+  +L  H ++HTGE+P   S
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 9e-07
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G KP++CE C K +  +  +  H   H G +P   S
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C++CG  +  K  L                              HQ+
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLD----------------------------MHQK 33

Query: 170 SHEGVKPFRC 179
            H G +P   
Sbjct: 34  VHTGERPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 59.9 bits (146), Expect = 1e-12
 Identities = 14/44 (31%), Positives = 19/44 (43%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQ 125
           +      G  P++CS C KSFS +  L  H  +H   KP     
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS 45

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +  AGV P+ C QC  +F+ K +L +                            HQR
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKLRLLV----------------------------HQR 33

Query: 170 SHEGVKPFRC 179
            H   KP   
Sbjct: 34  MHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  GV P++C  C+K+F+ ++ +  H   H   +P   S
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C+ C+K F+    L  H R+HT EKP   S
Sbjct: 15 CSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 1e-12
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++C  CGK F +   L+ H  +H G KP   
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KP++C  C K F R   +  H   H G +P   S
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.2 bits (103), Expect = 1e-06
 Identities = 15/32 (46%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C KVF     L  H  IHTGEKP   S
Sbjct: 13 YKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 1e-12
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TG KP+ C+ CGK+FS    L++H  +H G KP   
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 14/44 (31%), Positives = 18/44 (40%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  GVKP+ C  C K F+    +  H   H G +P   S 
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 6e-07
 Identities = 16/30 (53%), Positives = 17/30 (56%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C  C K F+   SL TH  IHTGEKP   S
Sbjct: 15 CNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 18/71 (25%), Positives = 23/71 (32%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   GVKP++C +CG AF+  S                             L  HQ 
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSS----------------------------LTTHQV 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  IHTGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.9 bits (146), Expect = 1e-12
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++C+ CGK+F  R  L+ H A H+G KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KP++C  C K F  +  +  H   H G +P   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/30 (43%), Positives = 14/30 (46%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C  C K F    SL  H   H+GEKP   S
Sbjct: 15 CNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 17/70 (24%), Positives = 22/70 (31%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C +CG AF  +S                             L  HQ 
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSS----------------------------LAIHQA 33

Query: 170 SHEGVKPFRC 179
           +H G KP   
Sbjct: 34  THSGEKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 1e-12
 Identities = 21/41 (51%), Positives = 25/41 (60%)

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
                TGEKP+ CSVCGK+FS R  LS H  +H+G KP   
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KP+ C  C K F+ +  +  H   H G +P   S 
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 15/30 (50%), Positives = 21/30 (70%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C+VC K F++ +SL  H RIH+G+KP   S
Sbjct: 15 CSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 17/71 (23%), Positives = 21/71 (29%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C  CG AF+ +                              L  HQR
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQS----------------------------LSVHQR 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  IHSGKKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 1e-12
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGE P+ C  CGK+FS++  L SH   HAG KP   
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 7e-08
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G  P+ C  C K F+R+  +  H   H G +P   S 
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS 45

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G  P+ C +CG AF++K Q                            L  HQR
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQ----------------------------LISHQR 33

Query: 170 SHEGVKPFRC 179
           +H G KP   
Sbjct: 34  THAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 7e-06
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C K F+    L +H R H GEKP   S
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 59.8 bits (146), Expect = 1e-12
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPH 121
            S    GEKP++C  CG  F Q   L +H+ +H G  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.7 bits (104), Expect = 8e-07
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYS 206
              S  G KP++CE C   F +   ++ H+  H G  P S
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
          + C  C   F  +  L+ H  IHTG  P 
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 14/67 (20%), Positives = 17/67 (25%), Gaps = 28/67 (41%)

Query: 111 HLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRS 170
                 G KP+ C+ CG  F Q + LR                             H   
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLR----------------------------AHVLI 33

Query: 171 HEGVKPF 177
           H G  P 
Sbjct: 34  HTGSGPS 40

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.9 bits (146), Expect = 1e-12
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TG KP++C+ CGK+FSQ   L+ H  VH G KP   
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
              S  G KP++C  C K F++   +  H   H G +P   S 
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 7e-07
 Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C +CG AF+Q S+                            L RHQR
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSK----------------------------LARHQR 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  VHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C  C K F+    L  H R+HTGEKP   S
Sbjct: 15 CNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 1e-12
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++C+ CGK+F     L++H  +H G KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 9e-07
 Identities = 15/30 (50%), Positives = 16/30 (53%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C  C K F    +L TH  IHTGEKP   S
Sbjct: 15 CNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 4e-06
 Identities = 17/71 (23%), Positives = 20/71 (28%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C +CG AF   S L                              HQ 
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNL----------------------------TTHQV 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  IHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G KP++C  C K F     +  H   H G +P   S
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 1e-12
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++C+ CGK+FSQ   L+ H  +H G KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 13/44 (29%), Positives = 19/44 (43%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KP++C  C K F++   +  H   H G +P   S 
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS 45

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C +CG AF+Q S+                            L RHQR
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSK----------------------------LARHQR 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  IHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 15/30 (50%), Positives = 16/30 (53%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C  C K F+    L  H RIHTGEKP   S
Sbjct: 15 CNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 1e-12
 Identities = 18/42 (42%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKPF C  CGK+FS    L+ H  +H G KP   
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 6e-07
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
              S  G KPF C  C K F+  I + +H   H G +P   S 
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 7e-07
 Identities = 16/32 (50%), Positives = 18/32 (56%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F C  C K F++   L  H RIHTGEKP   S
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 16/71 (22%), Positives = 20/71 (28%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP  C  CG AF+                                L +H+R
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIG----------------------------LNQHRR 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  IHTGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 59.5 bits (145), Expect = 1e-12
 Identities = 15/44 (34%), Positives = 18/44 (40%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQ 125
           +      GEK ++C  C   FSQ   L  H  VH G KP     
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS 45

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G K ++C  CD  F++   ++ H N H G +P   S
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C  C   F+   SL+ H  +H GEKP   S
Sbjct: 15 CRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 7e-07
 Identities = 16/70 (22%), Positives = 20/70 (28%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G K   C++C   F+Q S LR                             HQ 
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLR----------------------------LHQN 33

Query: 170 SHEGVKPFRC 179
            H G KP   
Sbjct: 34  VHVGEKPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 1e-12
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++C  CGK+F      + H  +H G +P   
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.0 bits (102), Expect = 1e-06
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C  C K F +  S   H R+HTG++P   S
Sbjct: 15 CMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
              S  G KP++C  C K F       +H   H G +P   S 
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.6 bits (101), Expect = 2e-06
 Identities = 16/71 (22%), Positives = 21/71 (29%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C +CG AF   S                               +HQR
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCT----------------------------QHQR 33

Query: 170 SHEGVKPFRCE 180
            H G +P    
Sbjct: 34  LHTGQRPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 1e-12
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++C+ CGK F+Q   L+ H  VH G KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
              S  G KP++C  C K FT+   +  H   H G +P   S 
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 45

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 19/71 (26%), Positives = 23/71 (32%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C +CG  FTQ S                             L RH+R
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSH----------------------------LARHRR 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  VHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 5e-06
 Identities = 14/30 (46%), Positives = 15/30 (50%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C  C KVF     L  H R+HTG KP   S
Sbjct: 15 CNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 1e-12
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP+ CS CGKSF ++  L  H  +H G  P   
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 1e-07
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
              S  G KP+ C  C K+F ++  +  H   H G  P   S 
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 8e-07
 Identities = 18/70 (25%), Positives = 22/70 (31%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C  CG +F +KSQL                              HQR
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLH----------------------------VHQR 33

Query: 170 SHEGVKPFRC 179
            H G  P   
Sbjct: 34  IHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 14/30 (46%), Positives = 15/30 (50%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C+ C K F     L  H RIHTGE P   S
Sbjct: 15 CSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 1e-12
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
                TGEKP++C VCGK+F     L  H +VH+G +P   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C VC K F     L  H  +H+GE+P   S
Sbjct: 15 CQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KP++C+ C K F     + +H + H G +P   S
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 2e-12
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP++C+ CGK F     LS H  +H G KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 13/44 (29%), Positives = 17/44 (38%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KP++C  C K F     +  H   H G +P   S 
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 6e-07
 Identities = 16/32 (50%), Positives = 18/32 (56%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C KVF +   L  H RIHTGEKP   S
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 2e-12
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +      GEKP+ CS CGK+FS +  L  H+  H+G KP   
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KP+ C  C K F+ +  +  H+  H G +P   S
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 4e-07
 Identities = 19/71 (26%), Positives = 24/71 (33%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +  AG KP+ C +CG AF+ KS                             L  H R
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSY----------------------------LIIHMR 33

Query: 170 SHEGVKPFRCE 180
           +H G KP    
Sbjct: 34  THSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C+ C K F++   L  H R H+GEKP   S
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.5 bits (145), Expect = 2e-12
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICK 124
           +     TG++P+ C  CGK+F  +  L  H   H G KP    
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G +P+ C +CG AF  KS                             L  H+R
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSS----------------------------LICHRR 33

Query: 170 SHEGVKPFRC 179
           SH G KP   
Sbjct: 34  SHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G +P+ C  C K F  +  +  H   H G +P   S
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 15/30 (50%), Positives = 15/30 (50%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C  C K F    SL  H R HTGEKP   S
Sbjct: 15 CIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 2e-12
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP+ C  CGK+F     L  H  +H G KP   
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 7e-07
 Identities = 19/71 (26%), Positives = 24/71 (33%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C++CG AF   SQL+                             HQR
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQ----------------------------EHQR 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  IHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 8e-07
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KP+ CE C K F     ++EH   H G +P   S
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 15/30 (50%), Positives = 17/30 (56%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C  C K F +   L+ H RIHTGEKP   S
Sbjct: 15 CEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 2e-12
 Identities = 19/43 (44%), Positives = 26/43 (60%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICK 124
           +     TGEKP+ C+ CGK+FS R  L++H A+H G KP    
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KP+ C  C K F+ +  +  H   H G +P   S 
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 8e-07
 Identities = 18/71 (25%), Positives = 22/71 (30%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C QCG AF+ +S                             L  HQ 
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSS----------------------------LTTHQA 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  IHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 15/30 (50%), Positives = 17/30 (56%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C  C K F+   SL TH  IHTG+KP   S
Sbjct: 15 CNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +      GE+  RCS CGK F Q      H  +H G KP   
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 9e-07
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
            C+ C K F    +   H RIHTGEKP   S
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G +  RC  C K F +     +H   H G +P   S
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 15/70 (21%), Positives = 19/70 (27%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G + H C  CG  F Q S                               +H+R
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASN----------------------------FIQHRR 33

Query: 170 SHEGVKPFRC 179
            H G KP   
Sbjct: 34  IHTGEKPSGP 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.0 bits (144), Expect = 2e-12
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP+ C+ C K+F+ +  L  H   H G      
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.0 bits (105), Expect = 7e-07
 Identities = 16/70 (22%), Positives = 21/70 (30%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C +C  AF  KS L +                            HQR
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMV----------------------------HQR 33

Query: 170 SHEGVKPFRC 179
           +H G      
Sbjct: 34  THTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.3 bits (98), Expect = 6e-06
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRC 95
          C  C+K FN   +L  H R HTGE     
Sbjct: 15 CNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.9 bits (97), Expect = 8e-06
 Identities = 12/41 (29%), Positives = 15/41 (36%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC 207
              S  G KP+ C  C K F  +  +  H   H G    S 
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     +GE+PF+C+ CGK F +R  L+ HL +H+  K    
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 7e-07
 Identities = 13/70 (18%), Positives = 19/70 (27%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +  +G +P  C +CG  F ++S                             L  H R
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSH----------------------------LAGHLR 33

Query: 170 SHEGVKPFRC 179
            H   K    
Sbjct: 34  LHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 7e-07
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F C  C K F     L  H R+H+ EK    S
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G +PF+C  C K F R+  +  HL  H   +    S
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 3e-12
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP+ C VC K+FS    L+ H  VH+G KP   
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 6e-07
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C VC+K F++  SL  H R+H+GEKP   S
Sbjct: 15 CDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 16/71 (22%), Positives = 21/71 (29%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C  C  AF+  +                             L +HQR
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHAS----------------------------LTQHQR 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  VHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
              S  G KP+ C+ C K F+    + +H   H G +P   S 
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 58.7 bits (143), Expect = 3e-12
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEK ++C+ CGK FS+   LS H  +H G KP   
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 46.7 bits (112), Expect = 7e-08
 Identities = 13/44 (29%), Positives = 19/44 (43%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G K ++C  C K F+R   + +H   H G +P   S 
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 15/32 (46%), Positives = 18/32 (56%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C KVF+    L  H +IHTGEKP   S
Sbjct: 13 YKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 16/71 (22%), Positives = 23/71 (32%), Gaps = 28/71 (39%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G K + C +CG  F++ SQ                            L +HQ+
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQ----------------------------LSQHQK 33

Query: 170 SHEGVKPFRCE 180
            H G KP    
Sbjct: 34  IHTGEKPSGPS 44

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 58.7 bits (143), Expect = 3e-12
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TG KP+ C+ CGK+F  +  L  H   H G      
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 16/70 (22%), Positives = 22/70 (31%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G+KP++C +CG AF  KS L                              H R
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLI----------------------------IHTR 33

Query: 170 SHEGVKPFRC 179
           +H G      
Sbjct: 34  THTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC 207
               S  G+KP+ C  C K F  +  +  H   H G    S 
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRC 95
          C  C K F +   L  H+R HTGE     
Sbjct: 15 CNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.3 bits (142), Expect = 4e-12
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     +  K  +C  CG+ F+ +  L+ H  +H G KP   
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 18/70 (25%), Positives = 22/70 (31%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +  +  K H C +CG  FT KS                             L +HQR
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSH----------------------------LNQHQR 33

Query: 170 SHEGVKPFRC 179
            H G KP   
Sbjct: 34  IHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 8/47 (17%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK----GVQPYSCS 208
               S    K  +C  C + FT     K HLN+H+    G +P   S
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTL----KSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 4e-06
 Identities = 14/32 (43%), Positives = 15/32 (46%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
            C  C + F     L  H RIHTGEKP   S
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 4e-12
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
                +GE+P+ C+ CGK+F +   L  HL  H   K    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 7e-07
 Identities = 10/32 (31%), Positives = 12/32 (37%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C  C K F     L  H + H  EK    S
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 8e-07
 Identities = 12/70 (17%), Positives = 19/70 (27%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +  +G +P+ C +CG  F + S                             L  H +
Sbjct: 2   SSGSSGSGERPYGCNECGKNFGRHSH----------------------------LIEHLK 33

Query: 170 SHEGVKPFRC 179
            H   K    
Sbjct: 34  RHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G +P+ C  C K F R   + EHL RH   +    S
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 5e-12
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +      GEKP++CS CGKSFS    L+ H   H   KP   
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 8e-07
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          + C+ C K F+    L  H   HT EKP   S
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 9e-07
 Identities = 13/70 (18%), Positives = 21/70 (30%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C +CG +F+   +                            L +H  
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYR----------------------------LTQHWI 33

Query: 170 SHEGVKPFRC 179
           +H   KP   
Sbjct: 34  THTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S EG KP++C  C K+F+    + +H   H   +P   S
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 58.1 bits (141), Expect = 5e-12
 Identities = 16/39 (41%), Positives = 20/39 (51%)

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPH 121
            S    GE P+ C  CGKSF+QRG L+ H    +   P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 43.8 bits (104), Expect = 8e-07
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 115 HAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
             G  P++C QCG +FTQ+  L +H+   
Sbjct: 6   SGGETPYLCGQCGKSFTQRGSLAVHQRSC 34

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.8 bits (91), Expect = 4e-05
 Identities = 9/29 (31%), Positives = 11/29 (37%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
          + C  C K F    SL  H R  +   P 
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.5 bits (85), Expect = 3e-04
 Identities = 11/40 (27%), Positives = 16/40 (40%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYS 206
              S  G  P+ C  C K+FT++  +  H        P S
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 6e-12
 Identities = 17/42 (40%), Positives = 19/42 (45%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP  C  CGKSFS    L  H  +H G  P   
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 13/44 (29%), Positives = 16/44 (36%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
               S  G KP  C  C K+F+    +  H   H G  P   S 
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 45

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KPH C++CG +F+  SQL                              HQR
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLI----------------------------VHQR 33

Query: 170 SHEGVKPFRC 179
            H G  P   
Sbjct: 34  IHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 4e-06
 Identities = 14/30 (46%), Positives = 15/30 (50%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          C  C K F+    L  H RIHTGE P   S
Sbjct: 15 CRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.0 bits (141), Expect = 6e-12
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKP +C+ CGK+F  +  L  H   H   K    
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 4e-07
 Identities = 18/70 (25%), Positives = 21/70 (30%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP  C +CG AF  KSQL                              HQR
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLI----------------------------MHQR 33

Query: 170 SHEGVKPFRC 179
           +H   K    
Sbjct: 34  THVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 11/32 (34%), Positives = 12/32 (37%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
            CT C K F     L  H R H  +K    S
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 11/43 (25%), Positives = 15/43 (34%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
               S  G KP +C  C K F  +  +  H   H   +    S
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 1e-11
 Identities = 16/44 (36%), Positives = 19/44 (43%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQ 125
           +     TGEKPF+C  CG +FS    L  HL  H    P     
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 5e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH 209
              S  G KPF+C+ C   F+    + +HL  H+   P   S 
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 1e-06
 Identities = 16/70 (22%), Positives = 20/70 (28%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP  CK+CG  F+    L                             +H R
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLF----------------------------KHLR 33

Query: 170 SHEGVKPFRC 179
           SHE   P   
Sbjct: 34  SHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 11/32 (34%), Positives = 12/32 (37%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F C  C   F+   SL  H R H    P   S
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 57.2 bits (139), Expect = 1e-11
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHL-AVHAGVKPHIC 123
           +     TG+KP+ C  CGK+F Q   L  H    H G KP   
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 9/47 (19%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK-----GVQPYSCS 208
              S  G KP+ C  C K F +       L RH      G +P   S
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQ----NTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.9 bits (94), Expect = 2e-05
 Identities = 18/71 (25%), Positives = 22/71 (30%), Gaps = 29/71 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G KP+ C +CG AF Q + L                             RH R
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLI----------------------------RHWR 33

Query: 170 S-HEGVKPFRC 179
             H G KP   
Sbjct: 34  YYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 65 FTCTVCKKVFNNIKSLKTHSR-IHTGEKPFRCS 96
          + C  C K F    SL  H R  HTGEKP   S
Sbjct: 13 YECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 57.2 bits (139), Expect = 1e-11
 Identities = 18/40 (45%), Positives = 21/40 (52%)

Query: 84  SRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           S   +GEKPF CS C K+FS +  L  H   HA  KP   
Sbjct: 2   SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 43.7 bits (104), Expect = 8e-07
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F C+ C+K F++   L  H + H  EKP   S
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 15/67 (22%), Positives = 21/67 (31%), Gaps = 28/67 (41%)

Query: 113 AVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHE 172
           +  +G KP  C  C  AF+ KS L +                            HQ++H 
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLV----------------------------HQQTHA 34

Query: 173 GVKPFRC 179
             KP   
Sbjct: 35  EEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 168 QRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
                G KPF C  C+K F+ +  +  H   H   +P   S
Sbjct: 2   SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 57.7 bits (139), Expect = 1e-11
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 7/65 (10%)

Query: 79  SLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRL 138
           S     +IH G++  +CS CG  F +R  LS         K  +C++C     Q++ L  
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNK 57

Query: 139 HEMRH 143
            E   
Sbjct: 58  DEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 48.1 bits (114), Expect = 5e-08
 Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 7/68 (10%)

Query: 160 TKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQS 219
           +     + Q+ H G +  +C  C   F R+      L+R K      C  C K      +
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRR----STLSRRK---TPMCEKCRKDSCQEAA 54

Query: 220 LNKHKLSH 227
           LNK + + 
Sbjct: 55  LNKDEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 45.0 bits (106), Expect = 6e-07
 Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 7/72 (9%)

Query: 106 GILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQ 165
           G       +H G +   C +CG  F ++S L          +   C  C      ++ L 
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALN 56

Query: 166 RHQRSHEGVKPF 177
           + + +  G K  
Sbjct: 57  KDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 41.6 bits (97), Expect = 1e-05
 Identities = 13/70 (18%), Positives = 19/70 (27%), Gaps = 7/70 (10%)

Query: 52  LNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSH 111
             K  + H       C+ C  +F             +  K   C  C K   Q   L+  
Sbjct: 6   SGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKD 58

Query: 112 LAVHAGVKPH 121
               +G K  
Sbjct: 59  EGNESGKKTS 68

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 56.4 bits (137), Expect = 2e-11
 Identities = 16/40 (40%), Positives = 22/40 (55%)

Query: 84  SRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           S   +GE P+ CS CGK+F+++  L SH   HAG      
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 15/65 (23%), Positives = 20/65 (30%), Gaps = 28/65 (43%)

Query: 115 HAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGV 174
            +G  P+ C +CG AF +K QL                              HQR+H G 
Sbjct: 5   SSGENPYECSECGKAFNRKDQLI----------------------------SHQRTHAGE 36

Query: 175 KPFRC 179
                
Sbjct: 37  SGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRC 95
          C+ C K FN    L +H R H GE     
Sbjct: 13 CSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 11/40 (27%), Positives = 14/40 (35%)

Query: 168 QRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC 207
                G  P+ C  C K F R+  +  H   H G    S 
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.0 bits (136), Expect = 3e-11
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGE P+ C  CGK FS++  L SH   H+G      
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.6 bits (104), Expect = 8e-07
 Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 28/70 (40%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR 169
           S  +   G  P+ C +CG  F++K QL                              HQ+
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLV----------------------------SHQK 33

Query: 170 SHEGVKPFRC 179
           +H G      
Sbjct: 34  THSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC 207
              S  G  P+ C  C K F+R+  +  H   H G    S 
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEKPFRC 95
          C  C KVF+    L +H + H+G+     
Sbjct: 15 CCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 54.6 bits (132), Expect = 1e-10
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 82  THSRIHTGEKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHIC 123
           +     TGEKPF C+   CG  FS+   LS H   H+GVKP   
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 45.0 bits (107), Expect = 3e-07
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 167 HQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G KPF C +  C   F+R   +  H   H GV+P   S
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 41.5 bits (98), Expect = 5e-06
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 139 HEMRHGNIRHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCE 180
                   + FAC    C ++F+   +L RH+RSH GVKP    
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 40.0 bits (94), Expect = 2e-05
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 65 FTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCS 96
          F CT   C   F+    L  H R H+G KP   S
Sbjct: 13 FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 1e-10
 Identities = 14/41 (34%), Positives = 16/41 (39%)

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
                +GEK   C  CGK+F     L  H  VH G K    
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 7e-07
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
           S  +  +G K H C +CG  F   S LR+H+  H
Sbjct: 2   SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCS 96
           TC  C K F  I +L+ H R+H GEK    S
Sbjct: 13 HTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 7e-05
 Identities = 11/42 (26%), Positives = 15/42 (35%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
              S  G K   C+ C K F     ++ H   H G +    S
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 52.6 bits (127), Expect = 5e-10
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 84  SRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPH 121
           S   +G++ + C  CGKSF Q+G L+ H  +H G  P 
Sbjct: 2   SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 39.5 bits (93), Expect = 3e-05
 Identities = 13/29 (44%), Positives = 14/29 (48%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
          + C  C K F    SL  H RIHTG  P 
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 115 HAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
            +G + + C++CG +F QK  L LHE  H
Sbjct: 5   SSGQRVYECQECGKSFRQKGSLTLHERIH 33

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 52.8 bits (127), Expect = 8e-10
 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 78  KSLKTHSRIHTGEKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICKQ--CGHAFTQK 133
                     +  +   CS   CGK++ +   L +H   H G KP  C    C   F + 
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62

Query: 134 SQLRLHEMRH 143
            +L  H   H
Sbjct: 63  DELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 52.0 bits (125), Expect = 1e-09
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 161 KSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQPYSCSH--CDKTFFD 216
            S     Q     ++   C +  C KT+ +   +K H   H G +P+SCS   C++ F  
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 217 AQSLNKHKLSH 227
           +  L++H+ +H
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 52.0 bits (125), Expect = 2e-09
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 4/68 (5%)

Query: 52  LNKHVEEHSTLGKFTCTV--CKKVFNNIKSLKTHSRIHTGEKPFRCSV--CGKSFSQRGI 107
            +    + S +    C+   C K +     LK H+R HTGEKPF CS   C + F++   
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64

Query: 108 LSSHLAVH 115
           LS H   H
Sbjct: 65  LSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 49.7 bits (119), Expect = 1e-08
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 133 KSQLRLHEMRHGNIRHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTR 188
            S     ++    IR   C+   C   +   S L+ H R+H G KPF C +  C++ F R
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 189 QIIMKEHLNRH 199
              +  H   H
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 47.8 bits (114), Expect = 6e-08
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)

Query: 108 LSSHLAVHAGVKPHICKQ--CGHAFTQKSQLRLHEMRHGNIRHFACNV--CPFKFTTKSD 163
            S      + ++ HIC    CG  + + S L+ H   H   + F+C+   C  +F    +
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64

Query: 164 LQRHQRSH 171
           L RH+R+H
Sbjct: 65  LSRHRRTH 72

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 53.4 bits (128), Expect = 9e-10
 Identities = 18/95 (18%), Positives = 23/95 (24%), Gaps = 21/95 (22%)

Query: 86  IHTGEKPFRCSVCGKSFSQRGILSSHL-AVHAGVKPHICKQCGHAFTQKSQLRLHEMRHG 144
           I   +       C ++FS    L +H+   H G        C                  
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC------------------ 60

Query: 145 NIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRC 179
                 C      F  K  L  H R H G K    
Sbjct: 61  --YWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 52.7 bits (126), Expect = 2e-09
 Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 9/74 (12%)

Query: 59  HSTLGKFTCTVCKKVFNNIKSLKTH-SRIHTGEKPFR--------CSVCGKSFSQRGILS 109
                      C + F+ +  L TH +  H G             C   GKSF  +  L 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 110 SHLAVHAGVKPHIC 123
           +H+ VH G K    
Sbjct: 80  NHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 46.9 bits (111), Expect = 2e-07
 Identities = 20/76 (26%), Positives = 22/76 (28%), Gaps = 9/76 (11%)

Query: 30 TEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGK---------FTCTVCKKVFNNIKSL 80
           +  Q S     C   F     L  HV      G            C    K F     L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 81 KTHSRIHTGEKPFRCS 96
            H R+HTGEK    S
Sbjct: 79 VNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 41.1 bits (96), Expect = 2e-05
 Identities = 14/75 (18%), Positives = 21/75 (28%), Gaps = 9/75 (12%)

Query: 143 HGNIRHFACNVCPFKFTTKSDLQRH-QRSHEGVKPFRCEYC--------DKTFTRQIIMK 193
                      C   F+T  +L  H    H G        C         K+F  +  + 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 194 EHLNRHKGVQPYSCS 208
            H+  H G +    S
Sbjct: 80  NHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 36.9 bits (85), Expect = 8e-04
 Identities = 14/66 (21%), Positives = 21/66 (31%), Gaps = 9/66 (13%)

Query: 171 HEGVKPFRCEYCDKTFTRQIIMKEHLNR-HKGVQPYS--------CSHCDKTFFDAQSLN 221
            E       + CD+TF+    +  H+   H G    +        C    K+F     L 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 222 KHKLSH 227
            H   H
Sbjct: 80  NHIRVH 85

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.3 bits (121), Expect = 3e-09
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAG 117
                T  K + C+ CGK+F++   L+ H  +H  
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/41 (26%), Positives = 13/41 (31%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC 207
              S    K + C  C K FTR   +  H   H      S 
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
           S  +     K + C +CG AFT+   L  H+  H
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 50.9 bits (121), Expect = 3e-09
 Identities = 19/56 (33%), Positives = 26/56 (46%)

Query: 64  KFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVK 119
           K+ C  C         LK H R HT  +P+ C+ C  SF  +G L+ H+   A  K
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 48.9 bits (116), Expect = 2e-08
 Identities = 14/51 (27%), Positives = 21/51 (41%)

Query: 93  FRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
           + C  CG    +  +L  H+  H  V+P+ C  C  +F  K  L  H    
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.5 bits (107), Expect = 3e-07
 Identities = 19/55 (34%), Positives = 30/55 (54%)

Query: 121 HICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVK 175
           +IC++CG    + S L+ H   H ++R + C  C F F TK +L +H +S    K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 44.7 bits (105), Expect = 6e-07
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 151 CNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG 201
           C  C  +    S L++H R+H  V+P+ C YC+ +F  +  + +H+     
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.8 bits (100), Expect = 3e-06
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 177 FRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
           + CE C     +  ++K+H+  H  V+PY C++C+ +F    +L KH  S 
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 36.2 bits (83), Expect = 6e-04
 Identities = 13/53 (24%), Positives = 21/53 (39%)

Query: 39 CNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEK 91
          C  C +      +L KH+  H+ +  + CT C   F    +L  H +     K
Sbjct: 4  CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 52.2 bits (124), Expect = 5e-09
 Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 8/116 (6%)

Query: 114 VHAGVKPHIC--KQCGHAFTQKSQLRLHEMRHGNIRHFACNV----CPFKFTTKSDLQRH 167
           V +G K ++   K      T +   R H++     R     V       +   +S     
Sbjct: 6   VDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYR 65

Query: 168 QRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKH 223
             + + +  F C  C   F+  + +K+H+   +      C  C K F    S   H
Sbjct: 66  LLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDH 119

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 45.3 bits (106), Expect = 2e-06
 Identities = 21/120 (17%), Positives = 35/120 (29%), Gaps = 6/120 (5%)

Query: 80  LKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLH 139
            K +   H G       V  +   +   L+                       +S     
Sbjct: 10  SKKYLSNHKG---IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQ-LLDESSYLYR 65

Query: 140 EMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRH 199
            +    I  F C +C   F++   L++H R  E      C  C K FT      +H+ + 
Sbjct: 66  LLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDHVCKK 123

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 43.8 bits (102), Expect = 5e-06
 Identities = 15/99 (15%), Positives = 25/99 (25%), Gaps = 6/99 (6%)

Query: 80  LKTHSRIHTGEKPFRCSV----CGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQ 135
            + H      ++  R  V                  L     +   +C  C   F+    
Sbjct: 30  KRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVS 89

Query: 136 LRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGV 174
           L+ H           C VC  +FT+      H      +
Sbjct: 90  LKQHIRYTE--HTKVCPVCKKEFTSTDSALDHVCKKHNI 126

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 2/72 (2%)

Query: 41  ICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGK 100
           I +    DE      +     + +F C +C   F++  SLK H R    E    C VC K
Sbjct: 51  IHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKK 108

Query: 101 SFSQRGILSSHL 112
            F+       H+
Sbjct: 109 EFTSTDSALDHV 120

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.1 bits (115), Expect = 2e-08
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 84  SRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHIC 123
           S   +GEKP+ C+ C ++FS    L  H  +H        
Sbjct: 2   SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 35.8 bits (83), Expect = 5e-04
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 113 AVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
           +  +G KP+ C +C   F+  ++L  H+  H
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMH 33

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 46.9 bits (112), Expect = 4e-08
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 4/33 (12%)

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVH 115
            +R  TG KPF+C  C +SFS+    S HLA+H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSR----SDHLALH 30

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 38.9 bits (91), Expect = 4e-05
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRH 199
             R   G+KPF+C  CD++F+R   +  H  RH
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 49.1 bits (116), Expect = 5e-08
 Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 149 FACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS 208
           + C +C  K ++  +   H+R         C YC   F    + +EH ++ +  +  +C 
Sbjct: 17  YQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESKCEYKK-LTCL 73

Query: 209 HCDKTFFDAQSLNKHKLS 226
            C +TF  + S+ +H++ 
Sbjct: 74  ECMRTFKSSFSIWRHQVE 91

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 46.8 bits (110), Expect = 3e-07
 Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 3/90 (3%)

Query: 81  KTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHE 140
            + +     ++ ++C +C    S      SH  +        C  C   F      + HE
Sbjct: 5   SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEHE 62

Query: 141 MRHGNIRHFACNVCPFKFTTKSDLQRHQRS 170
            +    +   C  C   F +   + RHQ  
Sbjct: 63  SKC-EYKKLTCLECMRTFKSSFSIWRHQVE 91

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.9 bits (92), Expect = 9e-05
 Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 3/79 (3%)

Query: 117 GVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKP 176
             + + C+ C    +   +   HE    N     C  C  +F +    Q H+   E  K 
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRN--AAVCPYCSLRFFSPELKQEHESKCEY-KK 69

Query: 177 FRCEYCDKTFTRQIIMKEH 195
             C  C +TF     +  H
Sbjct: 70  LTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 37.6 bits (86), Expect = 5e-04
 Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 3/78 (3%)

Query: 34  QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
           ++   C +C+      +    H           C  C   F + +  + H       K  
Sbjct: 14  KEVYQCRLCNAKLSSLLEQGSHERLCRN--AAVCPYCSLRFFSPELKQEHES-KCEYKKL 70

Query: 94  RCSVCGKSFSQRGILSSH 111
            C  C ++F     +  H
Sbjct: 71  TCLECMRTFKSSFSIWRH 88

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 46.8 bits (111), Expect = 8e-08
 Identities = 14/40 (35%), Positives = 18/40 (45%)

Query: 82  THSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPH 121
           +      GE PF+CS C + F+QR  L  H   HA     
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.5 bits (92), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG 201
               S  G  PF+C  CD+ FT++  + +H   H  
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.5 bits (87), Expect = 1e-04
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 110 SHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
           S  +  AG  P  C +C   FTQ++ L  HE  H
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 43.0 bits (101), Expect = 2e-06
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 64 KFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVC 98
          +  C +C K+F ++  L  H   H+GEKP+     
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 39.5 bits (92), Expect = 3e-05
 Identities = 13/43 (30%), Positives = 15/43 (34%)

Query: 168 QRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC 210
             S    K   CE C K F     +  H   H G +PYS    
Sbjct: 4   GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 39.5 bits (92), Expect = 3e-05
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 85  RIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQC 126
                 K   C +CGK F     L+ H   H+G KP+     
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 38.0 bits (88), Expect = 1e-04
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 147 RHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYC 182
           +  AC +C   F     L RH+ SH G KP+     
Sbjct: 11  KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 37.2 bits (86), Expect = 2e-04
 Identities = 8/40 (20%), Positives = 14/40 (35%)

Query: 115 HAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVC 154
               K   C+ CG  F     L  H++ H   + ++    
Sbjct: 7   GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 45.2 bits (106), Expect = 1e-05
 Identities = 7/51 (13%), Positives = 15/51 (29%)

Query: 65  FTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVH 115
                   + +   +        +    ++C VC         L +H+A H
Sbjct: 153 RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 42.5 bits (99), Expect = 9e-05
 Identities = 7/54 (12%), Positives = 10/54 (18%)

Query: 91  KPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHG 144
                       S+           +    + C  C         L  H   HG
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHG 204

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 42.1 bits (98), Expect = 1e-04
 Identities = 9/54 (16%), Positives = 17/54 (31%)

Query: 118 VKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSH 171
           +   I +      ++            +   + C+VC     +  DL  H  SH
Sbjct: 150 MSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	247
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.96
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.93
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.93
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.93
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.93
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.91
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.86
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.86
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.85
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.84
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.83
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.82
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.82
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.82
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.81
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.8
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.8
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.8
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.79
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.78
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.77
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.77
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.76
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.75
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.74
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.73
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.72
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.71
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.7
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.7
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.68
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.68
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.67
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.67
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.67
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.66
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.66
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.64
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.64
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.64
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.63
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.63
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.61
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.61
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.61
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.6
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.6
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.59
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.58
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.58
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.57
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.57
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.54
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.54
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.53
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.52
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.52
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.51
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.5
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.49
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.47
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.46
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.46
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.45
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.45
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.42
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.42
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.41
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.4
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.4
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.34
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.33
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.32
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.32
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.32
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.32
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.32
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.31
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.31
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.3
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.3
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.29
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.29
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.29
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.29
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.29
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.28
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.28
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.27
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.27
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.25
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.24
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.21
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.21
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.2
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.2
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.2
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.2
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.2
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.18
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.18
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.18
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.16
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.16
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.15
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.15
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.13
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.12
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.12
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.11
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.11
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.11
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.1
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.1
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.08
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.08
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.07
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.03
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.02
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.01
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.98
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.93
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.89
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.88
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.83
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.83
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.82
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.75
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.74
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.74
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.74
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.71
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.69
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.66
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.66
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.65
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.58
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.55
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.49
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.47
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.43
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.43
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.41
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.41
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.41
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.4
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.4
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.39
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.37
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.36
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.36
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.35
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.35
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.35
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.33
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.33
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.32
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.32
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.31
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.29
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.28
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.61
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.27
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.27
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.25
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.25
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.25
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.57
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.25
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.24
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.23
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.52
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.2
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.19
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.15
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.45
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.43
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.12
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.08
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.3
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.97
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.91
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.75
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.55
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.4
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.81
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.7
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.63
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.25
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.01
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.81
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.63
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.32
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	92.47
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	88.66
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	88.27
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	87.86
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	87.15
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	86.53
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	86.34
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	86.17
1twf_L	70	ABC10-alpha, DNA-directed RNA polymerases I, II, a	85.72
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	85.16
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	84.74
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	83.43
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	83.42
3h0g_L	63	DNA-directed RNA polymerases I, II, and III subuni	82.78
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	81.73
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	80.48
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	80.17

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=3.7e-42  Score=255.19  Aligned_cols=184  Identities=35%  Similarity=0.736  Sum_probs=132.4

Q ss_pred             HHHHHHHHHhCCCCceeccccccccCChHHHHHHHhhccCCCCeeCCCCCcccCChhHHHHHHHHhcCCCCeecCcCccc
Q psy2288          50 IVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHA  129 (247)
Q Consensus        50 ~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~  129 (247)
                      ..|..|+..+.++++|.|+.|++.|.+...|..|++.|.++.+|.|+.|++.|.+...|..|++.|.++++|.|+.|++.
T Consensus         7 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   86 (190)
T 2i13_A            7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKS   86 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             ccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCc
Confidence            45666777777777788888888888888888888888777888888888888888888888888888888888888888


Q ss_pred             ccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         130 FTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       130 f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |.+...|..|+..|.++++|.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|+++++|+|++
T Consensus        87 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  166 (190)
T 2i13_A           87 FSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPE  166 (190)
T ss_dssp             ESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT
T ss_pred             cCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCC
Confidence            88888888888888888888888888888888888899888888899999999999999999999999999999999999


Q ss_pred             ccccccChHHHHHHHHhccCCCCC
Q psy2288         210 CDKTFFDAQSLNKHKLSHKTSADP  233 (247)
Q Consensus       210 C~~~f~~~~~l~~H~~~h~~~~~~  233 (247)
                      |++.|.+...|..|+++|++++||
T Consensus       167 C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          167 CGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             TCCEESSHHHHHHHHTTC------
T ss_pred             CCCccCCHHHHHHHHHhcCCCCCC
Confidence            999999999999999999888775

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=5.2e-41  Score=249.02  Aligned_cols=185  Identities=36%  Similarity=0.713  Sum_probs=149.4

Q ss_pred             HHHHhhhhhhhhcCCceecccccccccCHHHHHHHHHHhCCCCceeccccccccCChHHHHHHHhhccCCCCeeCCCCCc
Q psy2288          21 ILALCMRKETEAQQKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGK  100 (247)
Q Consensus        21 ~~~l~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~  100 (247)
                      ...|..+...+.++++|.|+.|++.|.+...|..|++.+.++.+|.|+.|++.|.+...|..|++.|.++.+|.|+.|++
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   85 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGK   85 (190)
T ss_dssp             -------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCC
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCC
Confidence            35677788889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCChhHHHHHHHHhcCCCCeecCcCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccC
Q psy2288         101 SFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCE  180 (247)
Q Consensus       101 ~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~  180 (247)
                      .|.+...|..|++.|.++++|.|+.|++.|.+...|..|+..|.++++|.|+.|++.|.+.+.|..|+++|.++++|.|+
T Consensus        86 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  165 (190)
T 2i13_A           86 SFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP  165 (190)
T ss_dssp             EESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred             ccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCchhcccHHHHHHHHHhcCCCCCe
Q psy2288         181 YCDKTFTRQIIMKEHLNRHKGVQPY  205 (247)
Q Consensus       181 ~C~~~f~~~~~l~~H~~~h~~~~~~  205 (247)
                      .|++.|.+...|..|+++|+|++||
T Consensus       166 ~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          166 ECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             TTCCEESSHHHHHHHHTTC------
T ss_pred             CCCCccCCHHHHHHHHHhcCCCCCC
Confidence            9999999999999999999999876

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=2e-34  Score=213.49  Aligned_cols=165  Identities=32%  Similarity=0.565  Sum_probs=114.0

Q ss_pred             Cceec--cccccccCChHHHHHHHhhccCCCCeeC--CCCCcccCChhHHHHHHHHhcCCCCeecC--cCcccccChhHH
Q psy2288          63 GKFTC--TVCKKVFNNIKSLKTHSRIHTGEKPFRC--SVCGKSFSQRGILSSHLAVHAGVKPHICK--QCGHAFTQKSQL  136 (247)
Q Consensus        63 ~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l  136 (247)
                      ++|.|  +.|++.|.+...|..|++.|.++++|.|  +.|++.|.+...|..|+++|.++++|.|.  .|++.|.+...|
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   90 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANM   90 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHH
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHH
Confidence            34555  3455555555555555555555555555  45555555555555555555555666666  566666666666


Q ss_pred             HHHH-HHh-CCCCcccc--CCCccccCChHHHHHHHHHhCCCCCcccCc--CchhcccHHHHHHHHHhcCCCCCeeccc-
Q psy2288         137 RLHE-MRH-GNIRHFAC--NVCPFKFTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQPYSCSH-  209 (247)
Q Consensus       137 ~~h~-~~~-~~~~~~~C--~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~-  209 (247)
                      ..|+ ..| .+.++|.|  +.|++.|.+.+.|..|+++|.++++|.|+.  |++.|.+...|..|+++|++   |+|++ 
T Consensus        91 ~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~  167 (190)
T 1tf6_A           91 KKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKD  167 (190)
T ss_dssp             HHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCST
T ss_pred             HHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCC
Confidence            6666 333 34567888  778888888888888888888888888877  88888888888888888877   88888 


Q ss_pred             --ccccccChHHHHHHHHhccCC
Q psy2288         210 --CDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       210 --C~~~f~~~~~l~~H~~~h~~~  230 (247)
                        |++.|.+...|..|+++|+++
T Consensus       168 ~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          168 DSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             TTCCCCCSCHHHHHHHHTTCC--
T ss_pred             CcCCCccccHHHHHHHHHhhcCC
Confidence              888888888888888888753

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=7.1e-34  Score=210.55  Aligned_cols=171  Identities=27%  Similarity=0.579  Sum_probs=156.9

Q ss_pred             hhhhcCCceec--ccccccccCHHHHHHHHHHhCCCCceec--cccccccCChHHHHHHHhhccCCCCeeCC--CCCccc
Q psy2288          29 ETEAQQKSLAC--NICSMVFCDEIVLNKHVEEHSTLGKFTC--TVCKKVFNNIKSLKTHSRIHTGEKPFRCS--VCGKSF  102 (247)
Q Consensus        29 ~~~~~~~~~~C--~~C~~~~~~~~~l~~H~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f  102 (247)
                      ..+...++|.|  +.|++.|.+...|..|++.|.++++|.|  +.|++.|.+...|..|++.|.++++|.|+  .|++.|
T Consensus         5 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f   84 (190)
T 1tf6_A            5 ALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRF   84 (190)
T ss_dssp             -----CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEE
T ss_pred             cccCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCcc
Confidence            34556889999  6899999999999999999999999999  88999999999999999999999999999  899999


Q ss_pred             CChhHHHHHH-HHh-cCCCCeec--CcCcccccChhHHHHHHHHhCCCCccccCC--CccccCChHHHHHHHHHhCCCCC
Q psy2288         103 SQRGILSSHL-AVH-AGVKPHIC--KQCGHAFTQKSQLRLHEMRHGNIRHFACNV--CPFKFTTKSDLQRHQRSHEGVKP  176 (247)
Q Consensus       103 ~~~~~l~~H~-~~~-~~~~~~~C--~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~  176 (247)
                      .+...|..|+ ..| .+.++|.|  ..|++.|.+...|..|+++|.+++||.|+.  |++.|.+.+.|..|+++|.+   
T Consensus        85 ~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---  161 (190)
T 1tf6_A           85 TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---  161 (190)
T ss_dssp             SCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---
T ss_pred             CCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---
Confidence            9999999999 555 36789999  999999999999999999999999999988  99999999999999999988   


Q ss_pred             cccCc---CchhcccHHHHHHHHHhcCCC
Q psy2288         177 FRCEY---CDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       177 ~~C~~---C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      |.|+.   |++.|.+...|..|+++|+++
T Consensus       162 ~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          162 YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            89999   999999999999999999874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.96  E-value=1.1e-29  Score=181.90  Aligned_cols=106  Identities=30%  Similarity=0.572  Sum_probs=79.4

Q ss_pred             CcCcccccChhHHHHHHHHhCCCCccccCC--CccccCChHHHHHHHHHhCCCCCcccCc--CchhcccHHHHHHHH-Hh
Q psy2288         124 KQCGHAFTQKSQLRLHEMRHGNIRHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHL-NR  198 (247)
Q Consensus       124 ~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~  198 (247)
                      ..|++.|.+...|..|+..|.++++|.|+.  |++.|.+...|..|+++|.++++|.|+.  |++.|.+...|..|+ ++
T Consensus        43 ~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~  122 (155)
T 2gli_A           43 SRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT  122 (155)
T ss_dssp             TTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHT
T ss_pred             cchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHh
Confidence            344566777777777777777777777764  7777777777777777777777777776  888888777788887 67


Q ss_pred             cCCCCCeeccc--ccccccChHHHHHHHHhccC
Q psy2288         199 HKGVQPYSCSH--CDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       199 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  229 (247)
                      |.++++|+|++  |++.|.+...|..|+++|++
T Consensus       123 H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          123 HSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             cCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            77777888877  88888888888888877764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.96  E-value=1e-28  Score=176.82  Aligned_cols=137  Identities=29%  Similarity=0.606  Sum_probs=104.5

Q ss_pred             eeccccccccCChHHHHHHHh---hccCCCCeeC-----CCCCcccCChhHHHHHHHHhcCCCCeecCc--CcccccChh
Q psy2288          65 FTCTVCKKVFNNIKSLKTHSR---IHTGEKPFRC-----SVCGKSFSQRGILSSHLAVHAGVKPHICKQ--CGHAFTQKS  134 (247)
Q Consensus        65 ~~C~~C~~~f~~~~~l~~H~~---~~~~~~~~~C-----~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~  134 (247)
                      +.|+.|++.|.+...|..|++   .|.++++|.|     +.|++.|.+...|..|++.|.++++|.|++  |++.|.+..
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   83 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLE   83 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHH
T ss_pred             CCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHH
Confidence            444444444444444444443   2333444444     445588888888888888888888888875  888888888


Q ss_pred             HHHHHHHHhCCCCccccCC--CccccCChHHHHHHH-HHhCCCCCcccCc--CchhcccHHHHHHHHHhcCC
Q psy2288         135 QLRLHEMRHGNIRHFACNV--CPFKFTTKSDLQRHQ-RSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       135 ~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  201 (247)
                      .|..|++.|.++++|.|+.  |++.|.+.+.|..|+ ++|.++++|.|+.  |++.|.+...|..|+++|+|
T Consensus        84 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           84 NLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            8888888888888888887  999998888999998 7888888999987  99999999999999988875

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=1.4e-25  Score=154.43  Aligned_cols=114  Identities=27%  Similarity=0.634  Sum_probs=96.9

Q ss_pred             cCCCCeecCcCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHH---hCCCCCcccCcCchhcccHHHH
Q psy2288         116 AGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRS---HEGVKPFRCEYCDKTFTRQIIM  192 (247)
Q Consensus       116 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l  192 (247)
                      .+.++|.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+..   +.++++|.|+.|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            3567788888888888888888888888888888888888888888888888875   4678889999999999999999


Q ss_pred             HHHHHhcCCCCCeecccccccccChHHHHHHHHhccC
Q psy2288         193 KEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       193 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      ..|+++|+++++|+|++|++.|.+...|..|++..|.
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCC
Confidence            9999999999999999999999999999999875433

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.93  E-value=7.8e-26  Score=154.59  Aligned_cols=112  Identities=34%  Similarity=0.805  Sum_probs=98.5

Q ss_pred             cCCCCeecCc--CcccccChhHHHHHHHHhCCCCccccC--CCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHH
Q psy2288         116 AGVKPHICKQ--CGHAFTQKSQLRLHEMRHGNIRHFACN--VCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQII  191 (247)
Q Consensus       116 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  191 (247)
                      .++++|.|.+  |++.|.+...|..|+..|.++++|.|+  .|++.|.+...|..|+++|.++++|.|+.|++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            3567888886  888888888888888888888888888  699999999999999999988999999999999999999


Q ss_pred             HHHHHHhcCCCCCeec--ccccccccChHHHHHHHHhc
Q psy2288         192 MKEHLNRHKGVQPYSC--SHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       192 l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  227 (247)
                      |..|+++|+++++|+|  ++|++.|.+...|..|+++|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999999999  78999999999999998876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.93  E-value=9e-26  Score=155.43  Aligned_cols=115  Identities=33%  Similarity=0.706  Sum_probs=94.2

Q ss_pred             CCCeecC--cCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCc--CchhcccHHHHH
Q psy2288         118 VKPHICK--QCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMK  193 (247)
Q Consensus       118 ~~~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~  193 (247)
                      .++|.|+  .|++.|.+...|..|+..| +.++|.|+.|++.|.+...|..|+++|.++++|.|+.  |++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            4678888  7888888888888888877 7788888888888888888888888888888999975  999999999999


Q ss_pred             HHHHhcCCCCCeecc--cccccccChHHHHHHHHhccCCCCC
Q psy2288         194 EHLNRHKGVQPYSCS--HCDKTFFDAQSLNKHKLSHKTSADP  233 (247)
Q Consensus       194 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  233 (247)
                      .|+++|+++++|+|+  .|++.|.+...|..|+++|++++++
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            999999999999996  4999999999999999999888765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.93  E-value=1.6e-25  Score=160.14  Aligned_cols=119  Identities=30%  Similarity=0.512  Sum_probs=100.7

Q ss_pred             CCCeecCcCcccccChhHHHHHHHH-hCCCCc--------cccCCCccccCChHHHHHHHHHhCCCCCcccCc--Cchhc
Q psy2288         118 VKPHICKQCGHAFTQKSQLRLHEMR-HGNIRH--------FACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEY--CDKTF  186 (247)
Q Consensus       118 ~~~~~C~~C~~~f~~~~~l~~h~~~-~~~~~~--------~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f  186 (247)
                      ..+|.|..|++.|.+...|..|+.. |.+..+        |.|+.|++.|.+...|..|+++|.++++|.|+.  |++.|
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  102 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF  102 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEE
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCcc
Confidence            4456666666666666666666665 443332        789999999999999999999999999999988  99999


Q ss_pred             ccHHHHHHHHHhcCCCCCeeccc--ccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         187 TRQIIMKEHLNRHKGVQPYSCSH--CDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       187 ~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      .....|..|+++|+++++|+|++  |++.|.+...|..|+++|++++||.|.
T Consensus       103 ~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          103 ARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             SCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            99999999999999999999997  999999999999999999999999885

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=9e-26  Score=156.42  Aligned_cols=105  Identities=21%  Similarity=0.406  Sum_probs=79.6

Q ss_pred             HHHhcCCCCeecCcCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHH
Q psy2288         112 LAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQII  191 (247)
Q Consensus       112 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  191 (247)
                      ..++.|+++|.|.+|++.|.....|..|+++|.+++||.|+.|++.|...+.|..|+++|.+++||.|+.|++.|.+...
T Consensus        14 ~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~   93 (133)
T 2lt7_A           14 ELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQF   93 (133)
T ss_dssp             EEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHH
T ss_pred             eeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHH
Confidence            34566777788888888887777788887777777777887788777777777777777777777788778877877777


Q ss_pred             HHHHHHhcCCCC------CeecccccccccC
Q psy2288         192 MKEHLNRHKGVQ------PYSCSHCDKTFFD  216 (247)
Q Consensus       192 l~~H~~~h~~~~------~~~C~~C~~~f~~  216 (247)
                      |..|+++|++++      +|+|.+|++.|..
T Consensus        94 L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           94 MSSHIKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             HHHHHHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             HHHHhHHhcCCCCCCCCCCeecCCCCchhhh
Confidence            878877776653      4777777776653

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=2.1e-25  Score=154.57  Aligned_cols=102  Identities=25%  Similarity=0.401  Sum_probs=83.9

Q ss_pred             HHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHH
Q psy2288         141 MRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSL  220 (247)
Q Consensus       141 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  220 (247)
                      .++.++++|.|++|++.|.+.+.|..|+++|.+++||.|+.|++.|.+...|..|+++|++++||+|++||+.|.+...|
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFM   94 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHH
Confidence            45677888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHhccCCC------CCCCccccCCC
Q psy2288         221 NKHKLSHKTSA------DPISSAKGSKL  242 (247)
Q Consensus       221 ~~H~~~h~~~~------~~~c~~c~~~~  242 (247)
                      ..|+++|++++      +|+|..|+..+
T Consensus        95 ~~H~~~hh~~~p~~~~k~~~C~~C~k~~  122 (133)
T 2lt7_A           95 SSHIKSVHSQDPSGDSKLYRLHPCRSLQ  122 (133)
T ss_dssp             HHHHHHHTCCCTTSSSCCEEECCCCSSC
T ss_pred             HHHhHHhcCCCCCCCCCCeecCCCCchh
Confidence            88888887664      46777776543

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=4.3e-24  Score=146.92  Aligned_cols=114  Identities=32%  Similarity=0.683  Sum_probs=89.8

Q ss_pred             CCCCeeCCCCCcccCChhHHHHHHHHhcCCCCeecCcCcccccChhHHHHHHHH---hCCCCccccCCCccccCChHHHH
Q psy2288          89 GEKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMR---HGNIRHFACNVCPFKFTTKSDLQ  165 (247)
Q Consensus        89 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~---~~~~~~~~C~~C~~~~~~~~~l~  165 (247)
                      ++.+|.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+..   +.++++|.|+.|++.|.+...|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            455677777777777777777777777777777777777777777777777774   45677888888888888888888


Q ss_pred             HHHHHhCCCCCcccCcCchhcccHHHHHHHHHh-cCCC
Q psy2288         166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNR-HKGV  202 (247)
Q Consensus       166 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~  202 (247)
                      .|+++|.++++|.|+.|++.|.+...|..|++. |.++
T Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            888888888888888888888888888888874 5543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=2.6e-24  Score=146.97  Aligned_cols=111  Identities=36%  Similarity=0.770  Sum_probs=87.5

Q ss_pred             CCCCeeCCC--CCcccCChhHHHHHHHHhcCCCCeecC--cCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHH
Q psy2288          89 GEKPFRCSV--CGKSFSQRGILSSHLAVHAGVKPHICK--QCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDL  164 (247)
Q Consensus        89 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l  164 (247)
                      ++++|.|++  |++.|.+...|..|++.|.++++|.|.  .|++.|.+...|..|+..|.++++|.|+.|++.|.+...|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            456677775  777777777777777777777777777  6888887777788887777777788888888888888888


Q ss_pred             HHHHHHhCCCCCccc--CcCchhcccHHHHHHHHHhc
Q psy2288         165 QRHQRSHEGVKPFRC--EYCDKTFTRQIIMKEHLNRH  199 (247)
Q Consensus       165 ~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  199 (247)
                      ..|+++|.++++|.|  +.|++.|.+...|..|+++|
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            888888888888888  67888888888888888765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.91  E-value=1.2e-24  Score=155.64  Aligned_cols=118  Identities=30%  Similarity=0.557  Sum_probs=89.2

Q ss_pred             CCeeCCCCCcccCChhHHHHHHHH-hcCCCC--------eecCcCcccccChhHHHHHHHHhCCCCccccCC--CccccC
Q psy2288          91 KPFRCSVCGKSFSQRGILSSHLAV-HAGVKP--------HICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV--CPFKFT  159 (247)
Q Consensus        91 ~~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~--------~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~  159 (247)
                      ..|.|..|++.|.+...|..|++. |.+..+        |.|.+|++.|.+...|..|+..|.++++|.|+.  |++.|.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  103 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA  103 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEES
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccC
Confidence            345555555555555555555554 333322        678888888888888888888888888888877  888888


Q ss_pred             ChHHHHHHHHHhCCCCCcccCc--CchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         160 TKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       160 ~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      ....|..|+++|.++++|.|+.  |++.|.+...|..|+++|++++||.|.
T Consensus       104 ~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          104 RSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            8888888888888888888886  888888888888888888888888885

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.91  E-value=1.3e-24  Score=149.62  Aligned_cols=114  Identities=31%  Similarity=0.715  Sum_probs=71.0

Q ss_pred             CCeeCC--CCCcccCChhHHHHHHHHhcCCCCeecCcCcccccChhHHHHHHHHhCCCCccccCC--CccccCChHHHHH
Q psy2288          91 KPFRCS--VCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV--CPFKFTTKSDLQR  166 (247)
Q Consensus        91 ~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~  166 (247)
                      ++|.|+  .|++.|.+...|..|+++| +.++|.|..|++.|.+...|..|+..|.++++|.|+.  |++.|.+...|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            345665  5666666666666666655 5566666666666666666666666666666666654  6666666666777


Q ss_pred             HHHHhCCCCCcccC--cCchhcccHHHHHHHHHhcCCCCCe
Q psy2288         167 HQRSHEGVKPFRCE--YCDKTFTRQIIMKEHLNRHKGVQPY  205 (247)
Q Consensus       167 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  205 (247)
                      |+++|.++++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        83 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           83 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            77667666777774  3777777777777777777666654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.86  E-value=1.3e-21  Score=130.69  Aligned_cols=92  Identities=30%  Similarity=0.700  Sum_probs=83.0

Q ss_pred             CCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHH
Q psy2288         144 GNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKH  223 (247)
Q Consensus       144 ~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  223 (247)
                      ..+++|.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.....|..|+++|+++++|+|.+|++.|.+...|..|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence            35678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccCCCCCCC
Q psy2288         224 KLSHKTSADPIS  235 (247)
Q Consensus       224 ~~~h~~~~~~~c  235 (247)
                      +++|+++++|.+
T Consensus        93 ~~~H~~~~~~~~  104 (106)
T 2ee8_A           93 KTLHMQTSSPTA  104 (106)
T ss_dssp             HHHTTSCCCCCC
T ss_pred             HHHhCCCCCCcC
Confidence            999999888865

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=1.2e-21  Score=128.52  Aligned_cols=91  Identities=31%  Similarity=0.630  Sum_probs=84.4

Q ss_pred             CCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHH
Q psy2288         144 GNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKH  223 (247)
Q Consensus       144 ~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  223 (247)
                      .++++|.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.....|..|+++|+++++|+|++|++.|.+...|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccCCCCCC
Q psy2288         224 KLSHKTSADPI  234 (247)
Q Consensus       224 ~~~h~~~~~~~  234 (247)
                      +++|++++++.
T Consensus        84 ~~~h~~~~~p~   94 (96)
T 2dmd_A           84 LRSHTGDSGPS   94 (96)
T ss_dssp             HTTCCSCCCCC
T ss_pred             HHHhcCCCCCC
Confidence            99999887664

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.85  E-value=1.6e-21  Score=126.34  Aligned_cols=87  Identities=32%  Similarity=0.745  Sum_probs=75.4

Q ss_pred             CCccccC--CCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHH
Q psy2288         146 IRHFACN--VCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKH  223 (247)
Q Consensus       146 ~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  223 (247)
                      +++|.|+  .|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|+++++|+|++|++.|.+...|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            5788887  59999999999999999999899999999999999999999999999999999999999999999999999


Q ss_pred             HHhccCCCC
Q psy2288         224 KLSHKTSAD  232 (247)
Q Consensus       224 ~~~h~~~~~  232 (247)
                      +++|+++++
T Consensus        82 ~~~H~~~k~   90 (90)
T 1a1h_A           82 TKIHLRQKD   90 (90)
T ss_dssp             HGGGGC---
T ss_pred             HHHhcccCC
Confidence            999987753

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.84  E-value=3.7e-21  Score=122.30  Aligned_cols=82  Identities=33%  Similarity=0.696  Sum_probs=73.6

Q ss_pred             ccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhc
Q psy2288         148 HFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       148 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      ||.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.....|..|+++|+++++|+|++|++.|.+...|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            57889999999999999999999988999999999999999999999999999999999999999999999999999888


Q ss_pred             cC
Q psy2288         228 KT  229 (247)
Q Consensus       228 ~~  229 (247)
                      ++
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            64

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.83  E-value=3e-20  Score=124.02  Aligned_cols=92  Identities=30%  Similarity=0.616  Sum_probs=80.1

Q ss_pred             cCCCCeecCcCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHH
Q psy2288         116 AGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEH  195 (247)
Q Consensus       116 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  195 (247)
                      ..+++|.|.+|++.|.+...|..|+..|.++++|.|+.|++.|.....|..|+++|.++++|.|+.|++.|.+...|..|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence            35677888888888888888888888888888899999999999888999999888888899999999999999999999


Q ss_pred             HHhcCCCCCeec
Q psy2288         196 LNRHKGVQPYSC  207 (247)
Q Consensus       196 ~~~h~~~~~~~C  207 (247)
                      +++|+++++|.+
T Consensus        93 ~~~H~~~~~~~~  104 (106)
T 2ee8_A           93 KTLHMQTSSPTA  104 (106)
T ss_dssp             HHHTTSCCCCCC
T ss_pred             HHHhCCCCCCcC
Confidence            999988888764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=7.9e-21  Score=127.08  Aligned_cols=94  Identities=21%  Similarity=0.404  Sum_probs=78.5

Q ss_pred             HHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHH
Q psy2288         141 MRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSL  220 (247)
Q Consensus       141 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  220 (247)
                      +.+.++++|.|+.|++.|.....|..|+++|  .++|.|+.|++.|.....|..|+. |+++++|+|.+|++.|.+...|
T Consensus         9 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A            9 SPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             cccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            3566778888888888888888888888887  367889999999999899999985 8888899999999999999999


Q ss_pred             HHHHH-hccCCCCCCCcc
Q psy2288         221 NKHKL-SHKTSADPISSA  237 (247)
Q Consensus       221 ~~H~~-~h~~~~~~~c~~  237 (247)
                      ..|++ .|.++++|.+..
T Consensus        86 ~~H~~~~H~~~~~~~~~~  103 (107)
T 1wjp_A           86 WRHQVEVHNQNNMAPTSG  103 (107)
T ss_dssp             HHHHHHTSCCCCCCCCCC
T ss_pred             HHHHHHHcCCCCCCCCCC
Confidence            99986 788888887753

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.82  E-value=3.6e-22  Score=135.42  Aligned_cols=102  Identities=18%  Similarity=0.247  Sum_probs=69.7

Q ss_pred             HHHHHHHHhCCCCccccCCCccccCChHHHHHHHHH--hCCCCCcc-cCcCchhc--ccHHHHHHHHHhcCCCCCeeccc
Q psy2288         135 QLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRS--HEGVKPFR-CEYCDKTF--TRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       135 ~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      .|..|++.|.++++|.|+.|++.|.+...|..|+++  |.+.+++. |+.|++.|  .....|..|+++|++++||+|++
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~   85 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMY   85 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSS
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCC
Confidence            344555566666666666666666666666666666  55555443 77777777  67777777777777777777777


Q ss_pred             ccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         210 CDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       210 C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |++.|.+...|..|+++|+......++
T Consensus        86 C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           86 CGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             SCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             CCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            777777777777777777666544443

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=4.6e-20  Score=120.59  Aligned_cols=87  Identities=34%  Similarity=0.663  Sum_probs=74.3

Q ss_pred             CCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCC--CCeecccccccccChHHHH
Q psy2288         144 GNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV--QPYSCSHCDKTFFDAQSLN  221 (247)
Q Consensus       144 ~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~  221 (247)
                      .++++|.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|+++  ++|+|++|++.|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            35678888888888888888888888888888899999999999999999999888887  8899999999999999999


Q ss_pred             HHHH-hccCC
Q psy2288         222 KHKL-SHKTS  230 (247)
Q Consensus       222 ~H~~-~h~~~  230 (247)
                      .|++ .|.++
T Consensus        83 ~H~~~~H~~~   92 (95)
T 2yt9_A           83 GHIKQVHSGP   92 (95)
T ss_dssp             HHHHHTSCCC
T ss_pred             HHHHHhcCCC
Confidence            9985 56443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.81  E-value=3.7e-20  Score=124.46  Aligned_cols=88  Identities=32%  Similarity=0.670  Sum_probs=76.0

Q ss_pred             HhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHH
Q psy2288         142 RHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLN  221 (247)
Q Consensus       142 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  221 (247)
                      .|.++++|.| .|++.|.+...|..|++.|.++++|.|+.|++.|.....|..|+++|+++++|+|++|++.|.+...|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            3567788888 888888888888888888888888999999999999999999999898888999999999999999999


Q ss_pred             HHHHhccCC
Q psy2288         222 KHKLSHKTS  230 (247)
Q Consensus       222 ~H~~~h~~~  230 (247)
                      .|+++|+..
T Consensus        83 ~H~~~~~~~   91 (110)
T 2csh_A           83 RHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHcccc
Confidence            998887543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=6.8e-20  Score=120.03  Aligned_cols=89  Identities=28%  Similarity=0.671  Sum_probs=76.3

Q ss_pred             cCCCCeecCcCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHH
Q psy2288         116 AGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEH  195 (247)
Q Consensus       116 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  195 (247)
                      .++++|.|.+|++.|.+...|..|++.|.++++|.|+.|++.|.....|..|+++|.++++|.|+.|++.|.....|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            45678888888888888888888888888888888888888888888888888888888889999999999998899999


Q ss_pred             HHhcCCCCC
Q psy2288         196 LNRHKGVQP  204 (247)
Q Consensus       196 ~~~h~~~~~  204 (247)
                      +++|+++.+
T Consensus        84 ~~~h~~~~~   92 (96)
T 2dmd_A           84 LRSHTGDSG   92 (96)
T ss_dssp             HTTCCSCCC
T ss_pred             HHHhcCCCC
Confidence            888888754

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.81  E-value=5.8e-20  Score=118.87  Aligned_cols=86  Identities=31%  Similarity=0.648  Sum_probs=70.4

Q ss_pred             CCCeecC--cCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHH
Q psy2288         118 VKPHICK--QCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEH  195 (247)
Q Consensus       118 ~~~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  195 (247)
                      +++|.|+  .|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            5678887  58888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHhcCCCC
Q psy2288         196 LNRHKGVQ  203 (247)
Q Consensus       196 ~~~h~~~~  203 (247)
                      +++|++++
T Consensus        82 ~~~H~~~k   89 (90)
T 1a1h_A           82 TKIHLRQK   89 (90)
T ss_dssp             HGGGGC--
T ss_pred             HHHhcccC
Confidence            88888764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.80  E-value=9.5e-20  Score=115.70  Aligned_cols=82  Identities=34%  Similarity=0.754  Sum_probs=64.4

Q ss_pred             CeecCcCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhc
Q psy2288         120 PHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRH  199 (247)
Q Consensus       120 ~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  199 (247)
                      ||.|.+|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            46777777777777777777777777777888888888888888888888888888888888888888888888888877


Q ss_pred             CC
Q psy2288         200 KG  201 (247)
Q Consensus       200 ~~  201 (247)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            64

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.80  E-value=5.4e-21  Score=129.62  Aligned_cols=103  Identities=20%  Similarity=0.316  Sum_probs=81.7

Q ss_pred             hHHHHHHHHhcCCCCeecCcCcccccChhHHHHHHHH--hCCCCccc-cCCCcccc--CChHHHHHHHHHhCCCCCcccC
Q psy2288         106 GILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMR--HGNIRHFA-CNVCPFKF--TTKSDLQRHQRSHEGVKPFRCE  180 (247)
Q Consensus       106 ~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~--~~~~~~~~-C~~C~~~~--~~~~~l~~H~~~h~~~~~~~C~  180 (247)
                      ..|..|+++|.++++|.|.+|++.|.....|..|++.  +...+++. |+.|++.|  .....|..|+++|.++++|.|+
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            4466677777788888888888888888888888877  65555544 88888888  7888888888888888899999


Q ss_pred             cCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         181 YCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       181 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      .|++.|.+...|..|+++|+.......+
T Consensus        85 ~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             SSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             CCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            9999999999999999888776554443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=5e-20  Score=123.15  Aligned_cols=94  Identities=18%  Similarity=0.261  Sum_probs=76.6

Q ss_pred             HHHhcCCCCeecCcCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHH
Q psy2288         112 LAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQII  191 (247)
Q Consensus       112 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  191 (247)
                      ++.|.++++|.|.+|++.|.....|..|++.|  .++|.|+.|++.|.....|..|+. |.++++|.|+.|++.|.....
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~   84 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFS   84 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHH
Confidence            34566777888888888888888888888876  367888888888888888888885 888888888888888888888


Q ss_pred             HHHHHH-hcCCCCCeecc
Q psy2288         192 MKEHLN-RHKGVQPYSCS  208 (247)
Q Consensus       192 l~~H~~-~h~~~~~~~C~  208 (247)
                      |..|++ .|.++++|.|.
T Consensus        85 L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           85 IWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHcCCCCCCCCC
Confidence            888886 78888888775

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.79  E-value=1e-19  Score=107.27  Aligned_cols=58  Identities=33%  Similarity=0.710  Sum_probs=49.2

Q ss_pred             CCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhccCCC
Q psy2288         174 VKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSA  231 (247)
Q Consensus       174 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  231 (247)
                      ++||.|..|++.|.....|..|+++|+|++||+|++||+.|.+.+.|..|+++|++++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6788888888888888888888888888888888888888888888888888887764

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=1e-18  Score=114.11  Aligned_cols=87  Identities=32%  Similarity=0.739  Sum_probs=70.8

Q ss_pred             cCCCCeecCcCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCC--CCcccCcCchhcccHHHHH
Q psy2288         116 AGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGV--KPFRCEYCDKTFTRQIIMK  193 (247)
Q Consensus       116 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~  193 (247)
                      .++++|.|.+|++.|.+...|..|+..|.++++|.|+.|++.|.....|..|+++|+++  ++|.|+.|++.|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            35677888888888888888888888888888888888888888888888888888876  7888888888888888888


Q ss_pred             HHHH-hcCCC
Q psy2288         194 EHLN-RHKGV  202 (247)
Q Consensus       194 ~H~~-~h~~~  202 (247)
                      .|++ .|.++
T Consensus        83 ~H~~~~H~~~   92 (95)
T 2yt9_A           83 GHIKQVHSGP   92 (95)
T ss_dssp             HHHHHTSCCC
T ss_pred             HHHHHhcCCC
Confidence            8885 56554

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.77  E-value=1e-18  Score=115.26  Aligned_cols=85  Identities=32%  Similarity=0.720  Sum_probs=74.2

Q ss_pred             CCCccccCC--CccccCChHHHHHHHHHhCCCCCcccC--cCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHH
Q psy2288         145 NIRHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCE--YCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSL  220 (247)
Q Consensus       145 ~~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  220 (247)
                      ..++|.|..  |++.|.....|..|+++|.++++|.|+  .|++.|.....|..|+++|+++++|+|++|++.|.+...|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            346788885  999999999999999999888999996  5999999999999999999999999999999999999999


Q ss_pred             HHHHHhccC
Q psy2288         221 NKHKLSHKT  229 (247)
Q Consensus       221 ~~H~~~h~~  229 (247)
                      ..|+++|++
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            999988853

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.77  E-value=5.4e-19  Score=113.98  Aligned_cols=82  Identities=32%  Similarity=0.734  Sum_probs=73.5

Q ss_pred             CCccccCC--CccccCChHHHHHHHHHhCCCCCcccC--cCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHH
Q psy2288         146 IRHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCE--YCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLN  221 (247)
Q Consensus       146 ~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  221 (247)
                      ..+|.|+.  |++.|.+...|..|+++|.++++|.|+  .|++.|.....|..|+++|+++++|+|++|++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46788888  999999999999999999999999997  59999999999999999999999999999999999999999


Q ss_pred             HHHHhc
Q psy2288         222 KHKLSH  227 (247)
Q Consensus       222 ~H~~~h  227 (247)
                      .|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            998887

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.1e-18  Score=117.21  Aligned_cols=87  Identities=36%  Similarity=0.651  Sum_probs=73.2

Q ss_pred             HhcCCCCeecCcCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHH
Q psy2288         114 VHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMK  193 (247)
Q Consensus       114 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  193 (247)
                      .|.++++|.| .|++.|.+...|..|+..|.++++|.|+.|++.|.....|..|+++|.++++|.|+.|++.|.....|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            3567788888 788888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHhcCC
Q psy2288         194 EHLNRHKG  201 (247)
Q Consensus       194 ~H~~~h~~  201 (247)
                      .|+++|+.
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            88888754

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.75  E-value=1.6e-19  Score=116.21  Aligned_cols=83  Identities=25%  Similarity=0.508  Sum_probs=72.4

Q ss_pred             CCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHH
Q psy2288         146 IRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKL  225 (247)
Q Consensus       146 ~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  225 (247)
                      ++||.|+.|++.|.+.+.|..|+++|.++++|.|+.|++.|.....|..|+++|++ .+|.|+.|++.|.+...|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            46788999999999999999999999888999999999999999999999988885 77899999999999999999987


Q ss_pred             hccC
Q psy2288         226 SHKT  229 (247)
Q Consensus       226 ~h~~  229 (247)
                      .+++
T Consensus        80 ~~h~   83 (88)
T 1llm_C           80 RLKK   83 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.74  E-value=2e-18  Score=101.75  Aligned_cols=58  Identities=36%  Similarity=0.674  Sum_probs=52.0

Q ss_pred             CCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCC
Q psy2288         146 IRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQ  203 (247)
Q Consensus       146 ~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  203 (247)
                      ++||.|.+|++.|...+.|..|+++|.+++||.|+.|++.|.+...|..|+++|+|+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6889999999999999999999999999999999999999999999999999998864

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.73  E-value=6.7e-18  Score=107.78  Aligned_cols=78  Identities=29%  Similarity=0.529  Sum_probs=70.5

Q ss_pred             cccc--CCCccccCChHHHHHHHHHhCCCCCcccCc--CchhcccHHHHHHHHHhcCCCCCeeccc---ccccccChHHH
Q psy2288         148 HFAC--NVCPFKFTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQPYSCSH---CDKTFFDAQSL  220 (247)
Q Consensus       148 ~~~C--~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  220 (247)
                      ||.|  +.|++.|.+.+.|..|+++|.++++|.|+.  |++.|.+...|..|+++|++   |+|++   |++.|.+...|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5788  889999999999999999999999999988  99999999999999999988   99999   99999999999


Q ss_pred             HHHHHhcc
Q psy2288         221 NKHKLSHK  228 (247)
Q Consensus       221 ~~H~~~h~  228 (247)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99998875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.72  E-value=2.3e-17  Score=108.67  Aligned_cols=85  Identities=32%  Similarity=0.764  Sum_probs=67.2

Q ss_pred             CCCCeecCc--CcccccChhHHHHHHHHhCCCCccccC--CCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHH
Q psy2288         117 GVKPHICKQ--CGHAFTQKSQLRLHEMRHGNIRHFACN--VCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIM  192 (247)
Q Consensus       117 ~~~~~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  192 (247)
                      ..++|.|..  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|+++|.++++|.|+.|++.|.....|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            345677775  888888888888888777777788885  5888888888888888888888888888888888888888


Q ss_pred             HHHHHhcCC
Q psy2288         193 KEHLNRHKG  201 (247)
Q Consensus       193 ~~H~~~h~~  201 (247)
                      ..|+++|++
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            888888764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.71  E-value=1.7e-17  Score=106.93  Aligned_cols=82  Identities=35%  Similarity=0.835  Sum_probs=66.0

Q ss_pred             CCCeecCc--CcccccChhHHHHHHHHhCCCCccccC--CCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHH
Q psy2288         118 VKPHICKQ--CGHAFTQKSQLRLHEMRHGNIRHFACN--VCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMK  193 (247)
Q Consensus       118 ~~~~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  193 (247)
                      ..+|.|..  |++.|.+...|..|+..|.++++|.|+  .|++.|.+...|..|+++|.++++|.|+.|++.|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            45677777  888888888888888777777888886  58888888888888888888888888888888888888888


Q ss_pred             HHHHhc
Q psy2288         194 EHLNRH  199 (247)
Q Consensus       194 ~H~~~h  199 (247)
                      .|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            888776

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=8.6e-18  Score=107.57  Aligned_cols=77  Identities=27%  Similarity=0.568  Sum_probs=62.1

Q ss_pred             HHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCC----CCeecccccccccChHHHHHHHHhccCCCCCCCcccc
Q psy2288         164 LQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV----QPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKG  239 (247)
Q Consensus       164 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c~  239 (247)
                      +.+|+++|.++++|.|..|++.|.....|..|+++|++.    ++|+|.+|++.|.+...|..|+++|+++.++.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            345777788888888888888888888888888776665    6788888888888888888888888888888888886


Q ss_pred             C
Q psy2288         240 S  240 (247)
Q Consensus       240 ~  240 (247)
                      .
T Consensus        83 ~   83 (86)
T 1x6h_A           83 P   83 (86)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=2.7e-17  Score=103.46  Aligned_cols=66  Identities=24%  Similarity=0.566  Sum_probs=34.0

Q ss_pred             CCCcccCc--CchhcccHHHHHHHHH-hcCCCCCeeccc--ccccccChHHHHHHHHhccCCCCCCCcccc
Q psy2288         174 VKPFRCEY--CDKTFTRQIIMKEHLN-RHKGVQPYSCSH--CDKTFFDAQSLNKHKLSHKTSADPISSAKG  239 (247)
Q Consensus       174 ~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~c~~c~  239 (247)
                      +++|.|..  |++.|.+...|..|++ .|.++++|+|++  |++.|.+...|..|+++|++++||.|.+|+
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~   75 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSG   75 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSS
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCC
Confidence            44444443  5555555555555554 355555555554  555555555555555555555555555554

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.68  E-value=5.3e-18  Score=109.09  Aligned_cols=82  Identities=23%  Similarity=0.511  Sum_probs=68.1

Q ss_pred             CCCeecCcCcccccChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHH
Q psy2288         118 VKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLN  197 (247)
Q Consensus       118 ~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  197 (247)
                      ++||.|.+|++.|.....|..|+..|.+++||.|+.|++.|...+.|..|+++|++ .+|.|+.|++.|.....|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            36788888888888888888888888888888888888888888888888888874 77888889888888888888887


Q ss_pred             hcC
Q psy2288         198 RHK  200 (247)
Q Consensus       198 ~h~  200 (247)
                      .++
T Consensus        80 ~~h   82 (88)
T 1llm_C           80 RLK   82 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=4.5e-17  Score=101.94  Aligned_cols=65  Identities=26%  Similarity=0.622  Sum_probs=52.6

Q ss_pred             hCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCC
Q psy2288         171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPIS  235 (247)
Q Consensus       171 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  235 (247)
                      +.++++|.|+.|++.|.....|..|+++|+++++|+|++|++.|.+...|..|+++|++++||.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45667788888888888888888888888888888888888888888888888888888888776

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=2.8e-17  Score=105.15  Aligned_cols=78  Identities=24%  Similarity=0.388  Sum_probs=60.8

Q ss_pred             HHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCC----CCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccc
Q psy2288         137 RLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGV----KPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDK  212 (247)
Q Consensus       137 ~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  212 (247)
                      ..|+++|.++++|.|..|++.|.....|..|++.++..    ++|.|+.|++.|.....|..|+++|+++.++.|..|+.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~   83 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGP   83 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCC
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCC
Confidence            34566677777777777777777777777777766654    67888888888888888888888888888888888887


Q ss_pred             cc
Q psy2288         213 TF  214 (247)
Q Consensus       213 ~f  214 (247)
                      .|
T Consensus        84 ~~   85 (86)
T 1x6h_A           84 SS   85 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=2.4e-17  Score=108.11  Aligned_cols=82  Identities=18%  Similarity=0.313  Sum_probs=68.5

Q ss_pred             ccCChHHHHHHHHHhCCCCCcccCcCchhcc-cHHHHHHHHHhcCC-CCCeecccccccccChHHHHHHHHhccCCCCCC
Q psy2288         157 KFTTKSDLQRHQRSHEGVKPFRCEYCDKTFT-RQIIMKEHLNRHKG-VQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPI  234 (247)
Q Consensus       157 ~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  234 (247)
                      .+.....+..|+++|.++++|.|+.|++.|. ....|..|+++|++ +++|+|.+|++.|.+...|..|+++|++++|+.
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            3455566778888888889999999999998 88999999998888 888999999999999999999999998888765


Q ss_pred             Cccc
Q psy2288         235 SSAK  238 (247)
Q Consensus       235 c~~c  238 (247)
                      ....
T Consensus        85 ~~~~   88 (98)
T 2gqj_A           85 AEAS   88 (98)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            5443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.5e-16  Score=100.09  Aligned_cols=72  Identities=25%  Similarity=0.529  Sum_probs=67.9

Q ss_pred             CCCCccccCC--CccccCChHHHHHHHH-HhCCCCCcccCc--CchhcccHHHHHHHHHhcCCCCCeeccccccccc
Q psy2288         144 GNIRHFACNV--CPFKFTTKSDLQRHQR-SHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFF  215 (247)
Q Consensus       144 ~~~~~~~C~~--C~~~~~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  215 (247)
                      .++++|.|..  |++.|.+...|..|++ .|.++++|.|+.  |++.|.....|..|+++|+++++|+|++|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4578899986  9999999999999999 799999999999  9999999999999999999999999999999984

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.66  E-value=2.1e-16  Score=98.09  Aligned_cols=63  Identities=25%  Similarity=0.571  Sum_probs=52.6

Q ss_pred             hCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCC
Q psy2288         171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADP  233 (247)
Q Consensus       171 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  233 (247)
                      +.++++|.|+.|++.|.....|..|+++|+++++|+|.+|++.|.+...|..|+++|++++||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            456778888888888888888888888888888888888888888888888888888888775

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.66  E-value=2.1e-16  Score=100.72  Aligned_cols=78  Identities=27%  Similarity=0.651  Sum_probs=58.7

Q ss_pred             Ceec--CcCcccccChhHHHHHHHHhCCCCccccCC--CccccCChHHHHHHHHHhCCCCCcccCc---CchhcccHHHH
Q psy2288         120 PHIC--KQCGHAFTQKSQLRLHEMRHGNIRHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEY---CDKTFTRQIIM  192 (247)
Q Consensus       120 ~~~C--~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  192 (247)
                      ||.|  ..|++.|.....|..|++.|.++++|.|+.  |++.|.+...|..|+++|.+   |.|+.   |++.|.....|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            4667  667777777777777777777777777766  77777777777777777776   77777   88888888888


Q ss_pred             HHHHHhcC
Q psy2288         193 KEHLNRHK  200 (247)
Q Consensus       193 ~~H~~~h~  200 (247)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            88877764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=2.5e-16  Score=96.57  Aligned_cols=64  Identities=19%  Similarity=0.354  Sum_probs=57.7

Q ss_pred             HhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCC
Q psy2288         170 SHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADP  233 (247)
Q Consensus       170 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  233 (247)
                      ++.++++|.|+.|++.|.....|..|+++|+++++|+|++|++.|.+...|..|+++|++++|.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            3667889999999999999999999999999999999999999999999999999999988764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=4e-16  Score=101.58  Aligned_cols=74  Identities=15%  Similarity=0.252  Sum_probs=63.0

Q ss_pred             cccCChHHHHHHHHHhCCCCCcccCcCchhc-ccHHHHHHHHHhcCCCCCeecccccccccChHHHHHH-HHhccCC
Q psy2288         156 FKFTTKSDLQRHQRSHEGVKPFRCEYCDKTF-TRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKH-KLSHKTS  230 (247)
Q Consensus       156 ~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  230 (247)
                      ..|...+.|..|++.+.++++|.|+.|++.| .+...|..|+++| ++++|.|.+|++.|.....|..| +++|.++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            3566777888888888888899999999999 8899999999998 88899999999999999999999 7777543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=2.7e-16  Score=98.31  Aligned_cols=65  Identities=34%  Similarity=0.735  Sum_probs=59.1

Q ss_pred             hCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeec
Q psy2288         143 HGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC  207 (247)
Q Consensus       143 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  207 (247)
                      +.++++|.|+.|++.|.....|..|+++|.++++|.|+.|++.|.....|..|+++|++++||+|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45678899999999999999999999999999999999999999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.8e-16  Score=102.90  Aligned_cols=66  Identities=17%  Similarity=0.284  Sum_probs=37.8

Q ss_pred             CCCCCcccCcCchhcccHHHHHHHHH-hc---CCCCCeecccccccccChHHHHHH-HHhccCCCCCCCcc
Q psy2288         172 EGVKPFRCEYCDKTFTRQIIMKEHLN-RH---KGVQPYSCSHCDKTFFDAQSLNKH-KLSHKTSADPISSA  237 (247)
Q Consensus       172 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~c~~  237 (247)
                      .+++||.|+.|++.|.....|..|++ .|   .+++||+|.+||+.|.+...|..| +++|.+++||.|.+
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            34555556566666665555666654 35   345556666666666666666666 55565556655554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=4.2e-16  Score=96.12  Aligned_cols=63  Identities=35%  Similarity=0.733  Sum_probs=56.5

Q ss_pred             HHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhccCCC
Q psy2288         169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSA  231 (247)
Q Consensus       169 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  231 (247)
                      ++|.++++|.|+.|++.|.....|..|+++|+++++|+|++|++.|.+...|..|+++|+++.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            457888999999999999999999999999999999999999999999999999999987764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=5.1e-16  Score=101.69  Aligned_cols=70  Identities=19%  Similarity=0.346  Sum_probs=59.7

Q ss_pred             hCCCCccccCCCccccCChHHHHHHHH-Hh---CCCCCcccCcCchhcccHHHHHHH-HHhcCCCCCeecccccc
Q psy2288         143 HGNIRHFACNVCPFKFTTKSDLQRHQR-SH---EGVKPFRCEYCDKTFTRQIIMKEH-LNRHKGVQPYSCSHCDK  212 (247)
Q Consensus       143 ~~~~~~~~C~~C~~~~~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~  212 (247)
                      ..+++||.|+.|++.|...+.|..|++ +|   .+++||.|..|++.|.....|..| +++|+|++||+|.++..
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            357788999999999999999999987 47   567899999999999999999999 78899999999987543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.61  E-value=3.3e-17  Score=113.12  Aligned_cols=81  Identities=19%  Similarity=0.354  Sum_probs=65.1

Q ss_pred             CccccCCCcccc------CChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHH
Q psy2288         147 RHFACNVCPFKF------TTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSL  220 (247)
Q Consensus       147 ~~~~C~~C~~~~------~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  220 (247)
                      +++.|+.|+..|      .....|..|+ .|++++||.|+.|++.|.....|..|+++|  ++||+|++|++.|.+...|
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l  116 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSA  116 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHH
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHH
Confidence            344555554444      4556677776 578889999999999999999999999988  8889999999999999999


Q ss_pred             HHHHHhccCC
Q psy2288         221 NKHKLSHKTS  230 (247)
Q Consensus       221 ~~H~~~h~~~  230 (247)
                      ..|+++|++.
T Consensus       117 ~~H~~~h~~~  126 (129)
T 2wbt_A          117 LDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHTTCC
T ss_pred             HHHHHHHCCc
Confidence            9999998764

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=1.8e-16  Score=99.11  Aligned_cols=69  Identities=29%  Similarity=0.606  Sum_probs=59.9

Q ss_pred             HHHHHHhCCCCCcccCcCchhcccHHHHHHHHH-hcCCC-CCeecccccccccChHHHHHHHHhccCCCCC
Q psy2288         165 QRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLN-RHKGV-QPYSCSHCDKTFFDAQSLNKHKLSHKTSADP  233 (247)
Q Consensus       165 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  233 (247)
                      .+|+++|.++++|.|+.|++.|.....|..|++ .|.++ ++|+|++|++.|.+...|..|++++++...+
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            457788999999999999999999999999997 57664 7999999999999999999999987776544

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.60  E-value=7.1e-16  Score=90.51  Aligned_cols=57  Identities=32%  Similarity=0.657  Sum_probs=44.5

Q ss_pred             CCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhccC
Q psy2288         173 GVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       173 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      ++++|.|+.|++.|.+...|..|+++|++++||+|++|++.|.+...|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            356788888888888888888888888888888888888888888888888887763

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.60  E-value=2.1e-15  Score=93.50  Aligned_cols=64  Identities=33%  Similarity=0.730  Sum_probs=54.7

Q ss_pred             HhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCe
Q psy2288         142 RHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPY  205 (247)
Q Consensus       142 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  205 (247)
                      ...++++|.|+.|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3456788888888888888888888888888888899999999998888899998888888875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=3.8e-16  Score=102.36  Aligned_cols=79  Identities=14%  Similarity=0.236  Sum_probs=60.1

Q ss_pred             ccChhHHHHHHHHhCCCCccccCCCccccC-ChHHHHHHHHHhCC-CCCcccCcCchhcccHHHHHHHHHhcCCCCCeec
Q psy2288         130 FTQKSQLRLHEMRHGNIRHFACNVCPFKFT-TKSDLQRHQRSHEG-VKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC  207 (247)
Q Consensus       130 f~~~~~l~~h~~~~~~~~~~~C~~C~~~~~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  207 (247)
                      +.....+..|++.|.++++|.|+.|++.|. ....|..|+++|++ +++|.|.+|++.|.+...|..|+++|++++|+.-
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            344455666777777778888888888888 78888888888777 7788888888888888888888888888776544


Q ss_pred             c
Q psy2288         208 S  208 (247)
Q Consensus       208 ~  208 (247)
                      .
T Consensus        86 ~   86 (98)
T 2gqj_A           86 E   86 (98)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=3.3e-15  Score=97.25  Aligned_cols=77  Identities=18%  Similarity=0.276  Sum_probs=56.0

Q ss_pred             cccChhHHHHHHHHhCCCCccccCCCcccc-CChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHH-HHhcCCCCCee
Q psy2288         129 AFTQKSQLRLHEMRHGNIRHFACNVCPFKF-TTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEH-LNRHKGVQPYS  206 (247)
Q Consensus       129 ~f~~~~~l~~h~~~~~~~~~~~C~~C~~~~-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~  206 (247)
                      .|.....+..|+..+.++++|.|+.|++.| .....|..|+++| ++++|.|..|++.|.....|..| +++|+++..|.
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~   93 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGP   93 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCS
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCC
Confidence            455566666777777777777777777777 7777777777777 77778888888888887788888 67776554443

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.58  E-value=2.7e-15  Score=87.96  Aligned_cols=56  Identities=30%  Similarity=0.654  Sum_probs=46.0

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhccCCC
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSA  231 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  231 (247)
                      ||.|+.|++.|.....|..|+++|+++++|+|++|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57788888888888888888888888888888888888888888888888887664

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=1.4e-15  Score=92.00  Aligned_cols=61  Identities=25%  Similarity=0.539  Sum_probs=52.2

Q ss_pred             HHhCCCCCcccCcCchhcccHHHHHHHHHh-c-CCCCCeecccccccccChHHHHHHHHhccC
Q psy2288         169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNR-H-KGVQPYSCSHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       169 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      .+|.++++|.|+.|++.|.+...|..|+++ | .++++|+|++|++.|.+...|..|+++|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            357788889999999999999999999887 6 578889999999999999999999888865

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.57  E-value=3.6e-15  Score=94.22  Aligned_cols=61  Identities=21%  Similarity=0.480  Sum_probs=49.9

Q ss_pred             HhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHH-hccCC
Q psy2288         170 SHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKL-SHKTS  230 (247)
Q Consensus       170 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  230 (247)
                      .+...++|.|++|++.|.+...|..|+++|++++||+|.+|++.|.+...|.+|++ .|.+|
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            35567788888888888888888888888888888888888888888888888874 45444

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.54  E-value=4.8e-16  Score=107.21  Aligned_cols=80  Identities=21%  Similarity=0.350  Sum_probs=61.9

Q ss_pred             CeecCcCccccc------ChhHHHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHH
Q psy2288         120 PHICKQCGHAFT------QKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMK  193 (247)
Q Consensus       120 ~~~C~~C~~~f~------~~~~l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  193 (247)
                      .+.|.+|.+.|.      ....|..|+ .|++++||.|+.|++.|.....|..|+++|  ++||.|+.|++.|.....|.
T Consensus        41 ~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~  117 (129)
T 2wbt_A           41 RLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSAL  117 (129)
T ss_dssp             HHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHH
T ss_pred             cccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHH
Confidence            345555554443      455566665 577788888888888888888888888887  78888988999998888899


Q ss_pred             HHHHhcCCC
Q psy2288         194 EHLNRHKGV  202 (247)
Q Consensus       194 ~H~~~h~~~  202 (247)
                      .|+++|++.
T Consensus       118 ~H~~~h~~~  126 (129)
T 2wbt_A          118 DHVCKKHNI  126 (129)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHHHCCc
Confidence            998888875

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=7.5e-15  Score=89.91  Aligned_cols=63  Identities=22%  Similarity=0.512  Sum_probs=51.4

Q ss_pred             hCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCe
Q psy2288         143 HGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPY  205 (247)
Q Consensus       143 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  205 (247)
                      +.++++|.|+.|++.|.....|..|+++|.++++|.|+.|++.|.....|..|+++|++++|.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            456778888888888888888888888888888888888888888888888888888877653

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=1e-14  Score=91.35  Aligned_cols=65  Identities=22%  Similarity=0.434  Sum_probs=54.3

Q ss_pred             hCCCCCcccCcCchhcccHHHHHHHHHhcCC---CCCeecccccccccChHHHHHHHHh-ccCCCCCCC
Q psy2288         171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG---VQPYSCSHCDKTFFDAQSLNKHKLS-HKTSADPIS  235 (247)
Q Consensus       171 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~c  235 (247)
                      |.++++|.|..|++.|.....|..|+++|++   +++|+|.+|++.|.+...|..|++. |.++.+...
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            6788999999999999999999999999886   7899999999999999999999854 544544443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.3e-14  Score=89.28  Aligned_cols=62  Identities=31%  Similarity=0.579  Sum_probs=51.4

Q ss_pred             HhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCC
Q psy2288         142 RHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQ  203 (247)
Q Consensus       142 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  203 (247)
                      +|.++++|.|+.|++.|.....|..|+++|.++++|.|+.|++.|.....|..|+++|+++.
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            46677888888888888888888888888888888888888888888888888888887653

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.52  E-value=1.5e-14  Score=84.75  Aligned_cols=56  Identities=30%  Similarity=0.663  Sum_probs=46.1

Q ss_pred             CCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCC
Q psy2288         146 IRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       146 ~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  201 (247)
                      +++|.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            56788888888888888888888888888889998899999988889999888764

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=2.1e-14  Score=85.03  Aligned_cols=56  Identities=32%  Similarity=0.730  Sum_probs=45.0

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHH-HhccCC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHK-LSHKTS  230 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  230 (247)
                      +||.|+.|++.|.....|..|+++|+++++|+|++|++.|.+...|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            46888888888888888888888888888888888888888888888886 456443

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.50  E-value=3.5e-14  Score=83.15  Aligned_cols=56  Identities=25%  Similarity=0.697  Sum_probs=49.6

Q ss_pred             ccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCC
Q psy2288         148 HFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQ  203 (247)
Q Consensus       148 ~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  203 (247)
                      ||.|+.|++.|.+.+.|..|+++|.++++|.|+.|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57889999999999999999999998999999999999999999999999888764

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.49  E-value=3.5e-14  Score=89.67  Aligned_cols=62  Identities=26%  Similarity=0.495  Sum_probs=51.1

Q ss_pred             HhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHH-HhcCCCC
Q psy2288         142 RHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHL-NRHKGVQ  203 (247)
Q Consensus       142 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~  203 (247)
                      .+...++|.|++|++.|.....|..|+++|++++||.|+.|++.|.+...|..|+ +.|.++.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            4456677888888888888888888888888888899999999999999999997 4576654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=3.9e-17  Score=101.05  Aligned_cols=70  Identities=20%  Similarity=0.351  Sum_probs=52.4

Q ss_pred             HHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         162 SDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       162 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      +.|..|+++|.++++|.|+.|++.|.....|..       +++|+|++|++.|.+...|..|+++|++++||.|.+|
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            345566677777777777777777777666654       6778888888888888888888888888888888776

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=4.4e-14  Score=87.17  Aligned_cols=59  Identities=27%  Similarity=0.692  Sum_probs=50.8

Q ss_pred             HhCCCCCcccC--cCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhcc
Q psy2288         170 SHEGVKPFRCE--YCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       170 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  228 (247)
                      ++.++++|.|+  .|++.|.....|..|+++|+++++|+|++|++.|.+...|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            35678889997  599999999999999999998999999999999999999999988773

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=1.5e-14  Score=90.32  Aligned_cols=64  Identities=22%  Similarity=0.502  Sum_probs=45.2

Q ss_pred             HHHHHhCCCCccccCCCccccCChHHHHHHHH-HhCCC-CCcccCcCchhcccHHHHHHHHHhcCC
Q psy2288         138 LHEMRHGNIRHFACNVCPFKFTTKSDLQRHQR-SHEGV-KPFRCEYCDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       138 ~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~  201 (247)
                      .|+++|.+++||.|+.|++.|.....|..|++ .|.++ ++|.|+.|++.|.....|..|++++++
T Consensus         5 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             ccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            35556667777777777777777777777776 45543 677777777777777777777776554

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=3.7e-14  Score=85.67  Aligned_cols=60  Identities=30%  Similarity=0.564  Sum_probs=45.6

Q ss_pred             HhCCCCccccCCCccccCChHHHHHHHHH-h-CCCCCcccCcCchhcccHHHHHHHHHhcCC
Q psy2288         142 RHGNIRHFACNVCPFKFTTKSDLQRHQRS-H-EGVKPFRCEYCDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       142 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  201 (247)
                      +|.+++||.|+.|++.|.+...|..|+++ | .++++|.|+.|++.|.+...|..|+++|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            35566777777788778777778888776 5 467788888888888888888888877765

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.45  E-value=1.3e-13  Score=89.53  Aligned_cols=61  Identities=25%  Similarity=0.292  Sum_probs=46.9

Q ss_pred             CcccCcCchhcccHHHHHHHHHh-cCCCCC--------eecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNR-HKGVQP--------YSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      .|.|+.|++.|.....|..|+++ |.++++        |.|++|++.|.+...|..|+++|++++||.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            35677777777777777777776 666665        78888888888888888888888888888775

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=2.2e-13  Score=80.51  Aligned_cols=56  Identities=39%  Similarity=0.850  Sum_probs=48.3

Q ss_pred             CccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHH-HhcCCC
Q psy2288         147 RHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHL-NRHKGV  202 (247)
Q Consensus       147 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  202 (247)
                      +||.|+.|++.|...+.|..|+++|.++++|.|+.|++.|.+...|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            47889999999999999999999998899999999999999999999997 567654

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.2e-13  Score=83.36  Aligned_cols=59  Identities=22%  Similarity=0.393  Sum_probs=51.3

Q ss_pred             CCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc-cccccccChHHHHHHHHhccCCCC
Q psy2288         172 EGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS-HCDKTFFDAQSLNKHKLSHKTSAD  232 (247)
Q Consensus       172 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  232 (247)
                      .+++||.|..|++.|. ...|..|+++ ++++||+|+ +|++.|...+.|..|+++|...++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            4678899999999999 9999999988 889999999 899999999999999988866654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.3e-16  Score=98.61  Aligned_cols=68  Identities=22%  Similarity=0.293  Sum_probs=41.0

Q ss_pred             HHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         136 LRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       136 l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |..|++.|.++++|.|+.|++.|...+.|..       +++|.|+.|++.|.....|..|+++|+++++|+|++|
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3344444555555555555555555544443       5566666677777666666667666666666766665

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=2.1e-13  Score=85.23  Aligned_cols=64  Identities=27%  Similarity=0.556  Sum_probs=49.0

Q ss_pred             hCCCCccccCCCccccCChHHHHHHHHHhCC---CCCcccCcCchhcccHHHHHHHHH-hcCCCCCee
Q psy2288         143 HGNIRHFACNVCPFKFTTKSDLQRHQRSHEG---VKPFRCEYCDKTFTRQIIMKEHLN-RHKGVQPYS  206 (247)
Q Consensus       143 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~  206 (247)
                      |.++++|.|..|++.|.....|..|+++|.+   +++|.|+.|++.|.....|..|++ .|.++.+..
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            4567788888888888888888888888775   788888888888888888888884 455555543

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.40  E-value=4.5e-13  Score=86.99  Aligned_cols=61  Identities=23%  Similarity=0.321  Sum_probs=50.2

Q ss_pred             ccccCCCccccCChHHHHHHHHH-hCCCCC--------cccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         148 HFACNVCPFKFTTKSDLQRHQRS-HEGVKP--------FRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       148 ~~~C~~C~~~~~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      .+.|+.|++.|.....|..|+++ |.++++        |.|+.|++.|.....|..|+++|++++||+|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            35677888888888888888777 766666        88999999999999999999999999999886

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.3e-13  Score=75.21  Aligned_cols=44  Identities=32%  Similarity=0.469  Sum_probs=29.8

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            55566666667777777777666667677666666666666665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=3.3e-13  Score=74.41  Aligned_cols=44  Identities=25%  Similarity=0.443  Sum_probs=30.1

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|.+|++.|.+...|..|+++|.+++||.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44566666777777777777777777777777777777777665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.9e-13  Score=74.89  Aligned_cols=44  Identities=27%  Similarity=0.392  Sum_probs=29.9

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            55566666667777777777777777777666666667666665

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.8e-13  Score=74.96  Aligned_cols=44  Identities=23%  Similarity=0.410  Sum_probs=30.4

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666666777777777777777777777777777777777665

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.34  E-value=4.2e-13  Score=74.78  Aligned_cols=44  Identities=25%  Similarity=0.449  Sum_probs=28.8

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666655

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=1.2e-12  Score=80.66  Aligned_cols=59  Identities=34%  Similarity=0.759  Sum_probs=48.3

Q ss_pred             HhCCCCccccC--CCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcC
Q psy2288         142 RHGNIRHFACN--VCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHK  200 (247)
Q Consensus       142 ~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  200 (247)
                      .+.++++|.|+  .|++.|.....|..|+++|.++++|.|+.|++.|.....|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            35567788886  588888888888888888888888888888888888888888888764

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4e-13  Score=74.88  Aligned_cols=44  Identities=30%  Similarity=0.491  Sum_probs=30.4

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666666777777777777777777777777777777777665

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.3e-13  Score=74.74  Aligned_cols=44  Identities=27%  Similarity=0.435  Sum_probs=28.5

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.6e-13  Score=75.04  Aligned_cols=44  Identities=25%  Similarity=0.455  Sum_probs=29.4

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666665

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.1e-13  Score=74.78  Aligned_cols=44  Identities=25%  Similarity=0.447  Sum_probs=28.9

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666655

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=5.6e-13  Score=74.26  Aligned_cols=44  Identities=27%  Similarity=0.428  Sum_probs=28.4

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666654

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=5.2e-13  Score=74.38  Aligned_cols=44  Identities=25%  Similarity=0.381  Sum_probs=29.1

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666655

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.4e-13  Score=74.70  Aligned_cols=44  Identities=25%  Similarity=0.418  Sum_probs=29.5

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|.+|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666655

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=5.2e-13  Score=74.37  Aligned_cols=44  Identities=27%  Similarity=0.455  Sum_probs=28.9

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.33  E-value=3.8e-13  Score=74.94  Aligned_cols=44  Identities=25%  Similarity=0.411  Sum_probs=29.9

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666667777777777777777777666666667766665

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.4e-13  Score=74.70  Aligned_cols=44  Identities=30%  Similarity=0.468  Sum_probs=31.1

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55666777777777777777777777777777777777777665

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.33  E-value=4.9e-13  Score=74.50  Aligned_cols=44  Identities=23%  Similarity=0.397  Sum_probs=29.5

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666655

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.7e-13  Score=74.58  Aligned_cols=44  Identities=25%  Similarity=0.518  Sum_probs=28.1

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.2e-13  Score=74.78  Aligned_cols=44  Identities=25%  Similarity=0.387  Sum_probs=31.7

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|++|++.|.+.+.|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777665

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.33  E-value=3.9e-13  Score=74.89  Aligned_cols=44  Identities=25%  Similarity=0.351  Sum_probs=28.7

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            45566666666666666666666666666666666666666655

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=4.2e-13  Score=74.77  Aligned_cols=44  Identities=18%  Similarity=0.273  Sum_probs=29.2

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666655

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.7e-13  Score=74.56  Aligned_cols=44  Identities=27%  Similarity=0.477  Sum_probs=27.8

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666654

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.1e-13  Score=74.43  Aligned_cols=44  Identities=30%  Similarity=0.498  Sum_probs=28.5

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4e-13  Score=74.87  Aligned_cols=44  Identities=20%  Similarity=0.366  Sum_probs=27.9

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666654

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.7e-13  Score=74.56  Aligned_cols=44  Identities=20%  Similarity=0.332  Sum_probs=28.5

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.1e-13  Score=74.42  Aligned_cols=44  Identities=23%  Similarity=0.444  Sum_probs=30.5

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666667777777777777777777777777777777777665

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.32  E-value=4.1e-13  Score=74.82  Aligned_cols=44  Identities=34%  Similarity=0.474  Sum_probs=28.6

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.4e-13  Score=74.68  Aligned_cols=44  Identities=25%  Similarity=0.465  Sum_probs=26.8

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            44555666666666666666666666666666666666666554

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.3e-13  Score=74.36  Aligned_cols=44  Identities=25%  Similarity=0.425  Sum_probs=28.7

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.5e-13  Score=74.64  Aligned_cols=44  Identities=27%  Similarity=0.492  Sum_probs=27.7

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666654

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.2e-13  Score=74.36  Aligned_cols=44  Identities=23%  Similarity=0.364  Sum_probs=31.0

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666777777777777777777777777777777777777665

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.32  E-value=5.1e-13  Score=74.40  Aligned_cols=44  Identities=30%  Similarity=0.440  Sum_probs=29.6

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666655

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=4.9e-13  Score=74.48  Aligned_cols=44  Identities=25%  Similarity=0.472  Sum_probs=29.0

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666655

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.4e-13  Score=74.32  Aligned_cols=44  Identities=27%  Similarity=0.410  Sum_probs=26.9

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44555666666666666666666666666666666666666554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.8e-13  Score=74.53  Aligned_cols=44  Identities=25%  Similarity=0.480  Sum_probs=26.9

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44555666666666666666666666666666666666666554

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.6e-13  Score=74.26  Aligned_cols=44  Identities=27%  Similarity=0.434  Sum_probs=29.9

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666677777777777777777777777766677766665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=7.2e-13  Score=73.80  Aligned_cols=44  Identities=23%  Similarity=0.449  Sum_probs=29.2

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666655

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.6e-13  Score=74.24  Aligned_cols=44  Identities=23%  Similarity=0.305  Sum_probs=28.2

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666654

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.31  E-value=1.7e-12  Score=79.64  Aligned_cols=57  Identities=30%  Similarity=0.743  Sum_probs=47.3

Q ss_pred             hCCCCCcccCc--CchhcccHHHHHHHHHhcCCCCCeeccc--ccccccChHHHHHHHHhc
Q psy2288         171 HEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQPYSCSH--CDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       171 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  227 (247)
                      ....++|.|..  |++.|.....|..|+++|+++++|+|++  |++.|.+...|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34567788877  8888888888888888888888888865  888888888888888765

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.8e-13  Score=74.53  Aligned_cols=44  Identities=23%  Similarity=0.414  Sum_probs=29.6

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666665

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=6e-13  Score=74.11  Aligned_cols=44  Identities=27%  Similarity=0.485  Sum_probs=30.5

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777665

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.9e-13  Score=74.90  Aligned_cols=44  Identities=25%  Similarity=0.487  Sum_probs=32.6

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777765

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=7.1e-13  Score=73.82  Aligned_cols=44  Identities=20%  Similarity=0.325  Sum_probs=28.7

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|.+|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=5.6e-13  Score=74.23  Aligned_cols=44  Identities=20%  Similarity=0.285  Sum_probs=29.3

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666655

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.4e-13  Score=74.31  Aligned_cols=44  Identities=30%  Similarity=0.546  Sum_probs=39.0

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            56778888999999999999999999999999999999999887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.6e-13  Score=74.22  Aligned_cols=44  Identities=30%  Similarity=0.489  Sum_probs=38.1

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            56678888889999999999999999999988888888998877

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.31  E-value=5.6e-13  Score=74.24  Aligned_cols=44  Identities=30%  Similarity=0.556  Sum_probs=37.7

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678888888888888888888888888888888888888876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=5.1e-13  Score=73.66  Aligned_cols=44  Identities=27%  Similarity=0.517  Sum_probs=37.4

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45567888888998899999988889999888888888888876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.30  E-value=8.7e-13  Score=73.45  Aligned_cols=44  Identities=30%  Similarity=0.479  Sum_probs=29.1

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5e-13  Score=74.46  Aligned_cols=44  Identities=32%  Similarity=0.568  Sum_probs=38.3

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            56678888889999999999999999999989999999999887

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.4e-13  Score=74.29  Aligned_cols=44  Identities=27%  Similarity=0.516  Sum_probs=37.8

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678888888888888888888888888888888888888877

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.7e-13  Score=73.67  Aligned_cols=45  Identities=29%  Similarity=0.432  Sum_probs=39.0

Q ss_pred             HHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       166 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      +|+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778888999999999999999999999999999999999876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.6e-13  Score=74.24  Aligned_cols=44  Identities=34%  Similarity=0.614  Sum_probs=38.3

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678888889999999999999999999999998899998887

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.8e-13  Score=73.91  Aligned_cols=44  Identities=32%  Similarity=0.585  Sum_probs=39.0

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66778888999999999999999999999999999999999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.6e-13  Score=74.60  Aligned_cols=44  Identities=34%  Similarity=0.520  Sum_probs=38.9

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778888999999999999999999999999999999999887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.4e-13  Score=74.01  Aligned_cols=44  Identities=34%  Similarity=0.562  Sum_probs=38.2

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678888889999999999999999999999988899998877

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.9e-13  Score=74.89  Aligned_cols=44  Identities=20%  Similarity=0.425  Sum_probs=31.9

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777665

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.6e-13  Score=74.26  Aligned_cols=44  Identities=30%  Similarity=0.558  Sum_probs=38.5

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            56678888899999999999999999999999999999999887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.9e-13  Score=73.62  Aligned_cols=44  Identities=32%  Similarity=0.569  Sum_probs=38.7

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56778888899999999999999999999999999999999887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.4e-13  Score=73.74  Aligned_cols=44  Identities=30%  Similarity=0.496  Sum_probs=37.5

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56678888888888888888888888888888888888888877

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.7e-13  Score=74.22  Aligned_cols=44  Identities=30%  Similarity=0.567  Sum_probs=38.1

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678888889999999999999999999888888888988877

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.1e-13  Score=74.40  Aligned_cols=44  Identities=32%  Similarity=0.514  Sum_probs=38.5

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778888899999999999999999999999999999999877

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.2e-13  Score=73.79  Aligned_cols=44  Identities=30%  Similarity=0.531  Sum_probs=37.8

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678888888898898888888888889888888888888877

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.7e-13  Score=74.22  Aligned_cols=44  Identities=32%  Similarity=0.587  Sum_probs=38.5

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            56678888899999999999999999999999999999999887

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.8e-13  Score=74.18  Aligned_cols=44  Identities=32%  Similarity=0.545  Sum_probs=38.7

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678888999999999999999999999999999999999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.3e-13  Score=73.78  Aligned_cols=44  Identities=30%  Similarity=0.553  Sum_probs=38.2

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55678888889999999999999999999988988899999877

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.5e-13  Score=73.51  Aligned_cols=44  Identities=23%  Similarity=0.360  Sum_probs=29.7

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|.++++|+|++|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44556666667777777777777777777766766677766665

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.6e-13  Score=73.46  Aligned_cols=44  Identities=27%  Similarity=0.469  Sum_probs=28.8

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666543

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.29  E-value=5.9e-13  Score=74.16  Aligned_cols=44  Identities=30%  Similarity=0.484  Sum_probs=38.0

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            56678888889999999999998899999888888888988877

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.29  E-value=6.5e-13  Score=73.97  Aligned_cols=44  Identities=30%  Similarity=0.542  Sum_probs=38.6

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56778888899999999999999999999999999999999876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.2e-13  Score=73.79  Aligned_cols=44  Identities=34%  Similarity=0.622  Sum_probs=38.1

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            56678888889999999999999999999888988888998877

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=5.8e-13  Score=74.19  Aligned_cols=44  Identities=25%  Similarity=0.419  Sum_probs=38.9

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778888999999999999999999999999999999999887

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.29  E-value=2.1e-12  Score=74.54  Aligned_cols=46  Identities=24%  Similarity=0.424  Sum_probs=34.6

Q ss_pred             hCCCCCcccCcCchhcccHHHHHHHHH-hcCCCCCeecccccccccC
Q psy2288         171 HEGVKPFRCEYCDKTFTRQIIMKEHLN-RHKGVQPYSCSHCDKTFFD  216 (247)
Q Consensus       171 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  216 (247)
                      +.++++|.|+.|++.|.....|..|++ +|++++||+|++|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            456677777777777777777777776 7777777777777777764

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.29  E-value=5.9e-13  Score=74.16  Aligned_cols=44  Identities=36%  Similarity=0.600  Sum_probs=39.0

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778888999999999999999999999999999999999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.8e-13  Score=73.90  Aligned_cols=44  Identities=30%  Similarity=0.563  Sum_probs=38.6

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56778888899999999999999999999999999999999887

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.8e-13  Score=73.91  Aligned_cols=44  Identities=27%  Similarity=0.464  Sum_probs=38.0

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55678888889999999999999999999888988888988877

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.29  E-value=5.5e-13  Score=74.27  Aligned_cols=44  Identities=34%  Similarity=0.583  Sum_probs=35.4

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55667788888888888888888888888888888888888776

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.4e-13  Score=74.32  Aligned_cols=44  Identities=30%  Similarity=0.522  Sum_probs=38.4

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56678888899999999999999999999999988899999877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.4e-13  Score=73.74  Aligned_cols=44  Identities=30%  Similarity=0.444  Sum_probs=38.2

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678888889999999999999999999988988889998877

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=6.8e-13  Score=73.90  Aligned_cols=44  Identities=32%  Similarity=0.486  Sum_probs=38.4

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678888899999999999999999999999999999999887

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1.7e-12  Score=78.29  Aligned_cols=58  Identities=21%  Similarity=0.321  Sum_probs=41.2

Q ss_pred             CCCCccccCCCccccCChHHHHHHHHHhCCCCCcccC-cCchhcccHHHHHHHHHhcCCCC
Q psy2288         144 GNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCE-YCDKTFTRQIIMKEHLNRHKGVQ  203 (247)
Q Consensus       144 ~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~  203 (247)
                      .+++||.|..|++.|. .+.|..|+++ .+++||.|+ .|++.|.....|..|+++|....
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            3456777777777777 7777777777 777777777 77777777777777777765544

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.28  E-value=7.6e-13  Score=73.68  Aligned_cols=44  Identities=30%  Similarity=0.520  Sum_probs=38.6

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56678888899999999999999999999999999999999887

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8.3e-13  Score=73.53  Aligned_cols=45  Identities=36%  Similarity=0.602  Sum_probs=39.4

Q ss_pred             HHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       166 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      +|+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778888999999999999999999999999999999999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=9.9e-13  Score=73.22  Aligned_cols=44  Identities=34%  Similarity=0.529  Sum_probs=38.4

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||+|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55678888899999999999999999999999999999999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.9e-13  Score=73.86  Aligned_cols=45  Identities=31%  Similarity=0.506  Sum_probs=38.5

Q ss_pred             HHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       166 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      +|+++|.++++|.|+.|++.|.+...|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            356678888889999999999999999999888888888988877

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.8e-13  Score=73.64  Aligned_cols=44  Identities=25%  Similarity=0.335  Sum_probs=37.6

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678888888888888888888888888888888888888877

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.9e-13  Score=73.63  Aligned_cols=44  Identities=30%  Similarity=0.505  Sum_probs=37.2

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45677888888888888888888888888888888888888877

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=9.9e-13  Score=73.22  Aligned_cols=44  Identities=23%  Similarity=0.297  Sum_probs=38.1

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678888889999999999999999999989998889998877

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=6.8e-13  Score=73.89  Aligned_cols=44  Identities=30%  Similarity=0.563  Sum_probs=38.9

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            56678888999999999999999999999999999999999887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=8e-13  Score=73.59  Aligned_cols=44  Identities=34%  Similarity=0.626  Sum_probs=38.0

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            56678888889999999999999999999988888888988877

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.3e-12  Score=73.03  Aligned_cols=44  Identities=27%  Similarity=0.440  Sum_probs=27.4

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHH-hccCCCCCCCccc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKL-SHKTSADPISSAK  238 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~c~~c  238 (247)
                      |+++|.++++|+|.+|++.|.+...|..|++ +|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4455666666666666666666666666666 6666666666554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=9.1e-13  Score=73.36  Aligned_cols=44  Identities=25%  Similarity=0.329  Sum_probs=38.4

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678888899999999999999999999999999999999877

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.27  E-value=1.3e-12  Score=72.79  Aligned_cols=44  Identities=27%  Similarity=0.557  Sum_probs=38.3

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||+|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45678888899999999999999999999999999999999887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.1e-12  Score=73.08  Aligned_cols=44  Identities=27%  Similarity=0.466  Sum_probs=37.8

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45667888889999999999999999999999988889998887

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.3e-12  Score=72.75  Aligned_cols=44  Identities=34%  Similarity=0.549  Sum_probs=38.8

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66778888999999999999999999999999999999999875

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=5.9e-13  Score=74.14  Aligned_cols=44  Identities=32%  Similarity=0.558  Sum_probs=36.7

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55677888888888888888888888888888888888888876

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.2e-12  Score=71.81  Aligned_cols=43  Identities=23%  Similarity=0.396  Sum_probs=26.8

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCcc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSA  237 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~  237 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4455666666666666666666666666666666666666654

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.25  E-value=2.3e-12  Score=70.15  Aligned_cols=41  Identities=32%  Similarity=0.595  Sum_probs=27.6

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCC
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPIS  235 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  235 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            34556666667777777777777777777666666666666

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=6e-13  Score=74.14  Aligned_cols=44  Identities=30%  Similarity=0.613  Sum_probs=38.0

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678888889998899999988889999888888888988877

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.9e-12  Score=72.38  Aligned_cols=44  Identities=30%  Similarity=0.519  Sum_probs=38.2

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHH-hcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLN-RHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|++ +|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            5667888889999999999999999999998 8988899999877

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.3e-12  Score=71.67  Aligned_cols=44  Identities=36%  Similarity=0.658  Sum_probs=37.6

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678888889999999999999999999888888888888865

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=3.3e-12  Score=71.04  Aligned_cols=42  Identities=31%  Similarity=0.460  Sum_probs=28.9

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            556666667777777777777777777777777777776665

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.23  E-value=3.5e-12  Score=70.97  Aligned_cols=42  Identities=24%  Similarity=0.438  Sum_probs=29.1

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            556666677777777777777777777777777777776665

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.8e-12  Score=70.80  Aligned_cols=42  Identities=26%  Similarity=0.490  Sum_probs=29.1

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            556666677777777777777777777777777777777665

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.9e-12  Score=69.22  Aligned_cols=41  Identities=34%  Similarity=0.656  Sum_probs=27.1

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCC
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPIS  235 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  235 (247)
                      |+++|.+++||+|++|++.|.+...|..|+++|.+++||.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34556666666666666666666666666666666666665

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.5e-12  Score=70.96  Aligned_cols=42  Identities=26%  Similarity=0.390  Sum_probs=27.8

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455666666666666666666666666666666666666664

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.8e-12  Score=70.80  Aligned_cols=42  Identities=29%  Similarity=0.493  Sum_probs=29.1

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            555666677777777777777777777777777777777665

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.7e-12  Score=70.82  Aligned_cols=42  Identities=26%  Similarity=0.470  Sum_probs=27.8

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            455666666666666666666666666666666666666664

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.1e-12  Score=70.62  Aligned_cols=42  Identities=26%  Similarity=0.459  Sum_probs=29.2

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666677777777777777777777777777777777665

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=6.6e-12  Score=69.44  Aligned_cols=41  Identities=29%  Similarity=0.541  Sum_probs=22.6

Q ss_pred             cCCCCCeecccccccccChHHHHHHHHhccCCCCCCCcccc
Q psy2288         199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKG  239 (247)
Q Consensus       199 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c~  239 (247)
                      |++++||+|.+|++.|.....|..|+++|.++++|.|..||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            44555555555555555555555555555555555555553

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=1e-11  Score=68.61  Aligned_cols=42  Identities=29%  Similarity=0.510  Sum_probs=40.3

Q ss_pred             HhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccccc
Q psy2288         170 SHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCD  211 (247)
Q Consensus       170 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  211 (247)
                      +|.++++|.|+.|++.|.....|..|+++|+++++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            578899999999999999999999999999999999999997

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.3e-12  Score=70.57  Aligned_cols=42  Identities=24%  Similarity=0.373  Sum_probs=28.3

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            455666666666666776666666666666666666666664

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.1e-12  Score=70.24  Aligned_cols=42  Identities=26%  Similarity=0.475  Sum_probs=28.8

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            556666667777777777777777777777777766766664

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5e-12  Score=70.27  Aligned_cols=42  Identities=29%  Similarity=0.518  Sum_probs=28.8

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666666777777777777777777777777777776665

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.3e-12  Score=69.46  Aligned_cols=42  Identities=29%  Similarity=0.571  Sum_probs=30.9

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            566677777777777777777777777777777777777763

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5e-12  Score=70.28  Aligned_cols=42  Identities=26%  Similarity=0.519  Sum_probs=29.7

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            556667777777777777777777777777777777777765

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.3e-12  Score=70.18  Aligned_cols=42  Identities=33%  Similarity=0.568  Sum_probs=26.8

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.6e-12  Score=70.46  Aligned_cols=42  Identities=31%  Similarity=0.520  Sum_probs=30.0

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            556667777777777777777777777777777777777765

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.2e-12  Score=70.60  Aligned_cols=42  Identities=26%  Similarity=0.498  Sum_probs=26.7

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.20  E-value=7.7e-12  Score=70.19  Aligned_cols=40  Identities=30%  Similarity=0.543  Sum_probs=20.5

Q ss_pred             CCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccccc
Q psy2288         172 EGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCD  211 (247)
Q Consensus       172 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  211 (247)
                      .++++|.|..|++.|.+...|..|+++|++++||+|.+|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            3444555555555555555555555555555555555554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.5e-12  Score=70.47  Aligned_cols=42  Identities=24%  Similarity=0.463  Sum_probs=26.9

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.8e-12  Score=70.36  Aligned_cols=42  Identities=26%  Similarity=0.404  Sum_probs=27.5

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455666666666666666666666666666666666666664

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.3e-12  Score=69.85  Aligned_cols=42  Identities=29%  Similarity=0.562  Sum_probs=29.6

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            556667777777777777777777777777777777777663

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.3e-12  Score=70.54  Aligned_cols=42  Identities=26%  Similarity=0.485  Sum_probs=26.5

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5e-12  Score=70.29  Aligned_cols=42  Identities=31%  Similarity=0.474  Sum_probs=29.7

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556667777777777777777777777777777777777664

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.20  E-value=1.8e-12  Score=74.82  Aligned_cols=49  Identities=14%  Similarity=0.192  Sum_probs=29.4

Q ss_pred             hcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCC
Q psy2288         185 TFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADP  233 (247)
Q Consensus       185 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  233 (247)
                      .|.....|..|+++|+++++|+|.+|++.|...+.|..|+++|.+++||
T Consensus         5 ~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            5 RAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            4444555555666666666666666666666666666666666665554

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=5.4e-12  Score=69.43  Aligned_cols=42  Identities=29%  Similarity=0.592  Sum_probs=30.0

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            556677777777777777777777777777777777777663

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.8e-12  Score=70.37  Aligned_cols=42  Identities=26%  Similarity=0.502  Sum_probs=28.6

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666666777777777777777777777667666666664

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.20  E-value=4.9e-12  Score=68.83  Aligned_cols=42  Identities=26%  Similarity=0.508  Sum_probs=35.7

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||+|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            455678888899999999999999999999889888888885

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5e-12  Score=70.28  Aligned_cols=42  Identities=26%  Similarity=0.492  Sum_probs=28.5

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555666666677777777777777777777666666666664

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.8e-12  Score=70.36  Aligned_cols=42  Identities=29%  Similarity=0.556  Sum_probs=27.5

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            455666666666666666666666666666666666666664

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.8e-12  Score=70.01  Aligned_cols=42  Identities=29%  Similarity=0.481  Sum_probs=25.7

Q ss_pred             HhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         197 NRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       197 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      ++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            345556666666666666666666666666666666666554

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.9e-12  Score=69.71  Aligned_cols=42  Identities=26%  Similarity=0.415  Sum_probs=28.3

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            455666666677777777777666777776666666666664

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=4.4e-12  Score=70.54  Aligned_cols=43  Identities=28%  Similarity=0.508  Sum_probs=36.5

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5667888888888888888888888888888888888888864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.7e-12  Score=70.41  Aligned_cols=43  Identities=28%  Similarity=0.506  Sum_probs=37.3

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888889999999999999999999999999999998874

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.19  E-value=4.9e-12  Score=70.33  Aligned_cols=43  Identities=33%  Similarity=0.557  Sum_probs=36.5

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888888888888888888888888888888888888864

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.2e-12  Score=70.21  Aligned_cols=42  Identities=26%  Similarity=0.420  Sum_probs=26.3

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|++++||+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            445566666666666666666666666666666666666664

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.3e-12  Score=69.45  Aligned_cols=41  Identities=29%  Similarity=0.555  Sum_probs=27.3

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCC
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPIS  235 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  235 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            45566666666666666666666666666666666666665

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.18  E-value=7.6e-12  Score=68.05  Aligned_cols=41  Identities=29%  Similarity=0.485  Sum_probs=27.5

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCC
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPIS  235 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  235 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34556666667777777777777777777766766666665

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.7e-12  Score=69.35  Aligned_cols=41  Identities=29%  Similarity=0.478  Sum_probs=29.0

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCC
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPIS  235 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  235 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            55666777777777777777777777777777777777665

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.5e-12  Score=69.82  Aligned_cols=42  Identities=29%  Similarity=0.576  Sum_probs=24.9

Q ss_pred             HhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         197 NRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       197 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      ++|.++++|+|.+|++.|.+...|..|+++|.+++||.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345555666666666666666666666666666666666554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6e-12  Score=69.96  Aligned_cols=43  Identities=33%  Similarity=0.648  Sum_probs=36.7

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888888999999999999999999998888888888864

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.18  E-value=4.7e-13  Score=79.64  Aligned_cols=53  Identities=19%  Similarity=0.408  Sum_probs=43.1

Q ss_pred             HHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHH
Q psy2288         165 QRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSL  220 (247)
Q Consensus       165 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  220 (247)
                      ..|+++|.+++||.|+.|++.|.....|.   ++|++++||+|++||+.|....++
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            34667788888999999999998888776   788888899999999988766544

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.2e-12  Score=69.65  Aligned_cols=43  Identities=30%  Similarity=0.502  Sum_probs=36.2

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|+|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5567788888888888888888888888888888888888863

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.9e-12  Score=68.83  Aligned_cols=41  Identities=27%  Similarity=0.528  Sum_probs=30.3

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCC
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPIS  235 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  235 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45667777777777777777777777777777777777765

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.1e-12  Score=69.93  Aligned_cols=43  Identities=33%  Similarity=0.585  Sum_probs=36.7

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            5667888888999999999999889999988888888888864

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=6.5e-12  Score=69.83  Aligned_cols=42  Identities=24%  Similarity=0.365  Sum_probs=29.8

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccC-CCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKT-SADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~c~  236 (247)
                      |+++|.+++||+|.+|++.|.+...|..|+++|.+ ++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55666777777777777777777777777777777 7777765

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=5e-12  Score=68.82  Aligned_cols=41  Identities=27%  Similarity=0.469  Sum_probs=27.4

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCC
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPIS  235 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  235 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            44556666667777777777766667677666666666665

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.1e-12  Score=69.91  Aligned_cols=43  Identities=30%  Similarity=0.564  Sum_probs=36.4

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            5667888888888888888888888888888888888888864

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.8e-12  Score=70.01  Aligned_cols=42  Identities=31%  Similarity=0.576  Sum_probs=36.5

Q ss_pred             HHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       169 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      ++|.++++|.|+.|++.|.....|..|+++|++++||+|++|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            457788889999999999999999999988998899998877

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.2e-12  Score=69.61  Aligned_cols=42  Identities=29%  Similarity=0.479  Sum_probs=29.2

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|++|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556666677777777777777777777777777777777664

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=7.8e-12  Score=68.77  Aligned_cols=42  Identities=26%  Similarity=0.443  Sum_probs=30.6

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|++|++.|.....|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            556677777777777777777777777777777777777763

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.7e-12  Score=70.05  Aligned_cols=43  Identities=35%  Similarity=0.618  Sum_probs=36.7

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|..|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5667888888899889999998888999988888888888874

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.3e-12  Score=69.61  Aligned_cols=43  Identities=26%  Similarity=0.509  Sum_probs=37.2

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            5667888889999999999999999999999999999998864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.8e-12  Score=69.73  Aligned_cols=43  Identities=33%  Similarity=0.521  Sum_probs=36.6

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888888899889999998889999988888888888864

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9e-12  Score=67.75  Aligned_cols=42  Identities=24%  Similarity=0.423  Sum_probs=34.2

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            345677888888888888888888888888888888888874

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7e-12  Score=69.67  Aligned_cols=43  Identities=33%  Similarity=0.560  Sum_probs=37.0

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888889999999999999999999999999999998864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7e-12  Score=69.70  Aligned_cols=43  Identities=37%  Similarity=0.635  Sum_probs=36.6

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5667888888999889999999889999988888888888864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.1e-12  Score=69.42  Aligned_cols=43  Identities=30%  Similarity=0.564  Sum_probs=36.6

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888888889889888888888988988888888888864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.7e-12  Score=69.75  Aligned_cols=43  Identities=33%  Similarity=0.595  Sum_probs=36.4

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            5667888888888888888888888888888888888888864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.5e-12  Score=69.55  Aligned_cols=43  Identities=28%  Similarity=0.529  Sum_probs=36.7

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5667888888999999999999999999988888888888864

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6e-12  Score=69.98  Aligned_cols=42  Identities=31%  Similarity=0.562  Sum_probs=35.3

Q ss_pred             HHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       169 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      ++|.++++|.|+.|++.|.+...|..|+++|++++||+|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            457788888888888888888888888888888888888876

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.16  E-value=3.3e-11  Score=73.84  Aligned_cols=56  Identities=34%  Similarity=0.762  Sum_probs=45.0

Q ss_pred             CCCCccccCC--CccccCChHHHHHHHHHhCCCCCcccCc--CchhcccHHHHHHHHHhc
Q psy2288         144 GNIRHFACNV--CPFKFTTKSDLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRH  199 (247)
Q Consensus       144 ~~~~~~~C~~--C~~~~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  199 (247)
                      ...++|.|..  |++.|.....|..|+++|.++++|.|++  |++.|.....|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3456788877  8888888888888888888888888864  888888888888887765

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.2e-12  Score=69.63  Aligned_cols=43  Identities=30%  Similarity=0.574  Sum_probs=36.6

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5667888888899889999998888999988888888888864

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.4e-12  Score=69.83  Aligned_cols=42  Identities=29%  Similarity=0.402  Sum_probs=33.4

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|++++||+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            666777888888888888888888888888888888888775

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.4e-12  Score=69.86  Aligned_cols=43  Identities=30%  Similarity=0.576  Sum_probs=36.3

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            4567788888888888888888888888888888888888864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.1e-12  Score=69.64  Aligned_cols=43  Identities=30%  Similarity=0.558  Sum_probs=37.1

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            5667888889999999999999999999999999899998864

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8.2e-12  Score=69.40  Aligned_cols=42  Identities=24%  Similarity=0.383  Sum_probs=29.5

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|.++++|+|++|++.|.+...|..|+++|.+++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            556666777777777777777777777777777777777665

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9e-12  Score=69.24  Aligned_cols=42  Identities=29%  Similarity=0.479  Sum_probs=28.2

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445566666677777777777777777776666666666664

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9.5e-12  Score=69.14  Aligned_cols=43  Identities=35%  Similarity=0.547  Sum_probs=35.5

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5567788888888888888888888888888888888888864

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.15  E-value=7.6e-12  Score=72.12  Aligned_cols=52  Identities=12%  Similarity=0.242  Sum_probs=43.6

Q ss_pred             ccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCee
Q psy2288         155 PFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYS  206 (247)
Q Consensus       155 ~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  206 (247)
                      ++.|...+.|..|+++|.++++|.|+.|++.|.....|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            3567777788888888888889999999999999999999998898888763

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.7e-12  Score=69.28  Aligned_cols=43  Identities=33%  Similarity=0.614  Sum_probs=37.0

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5667888889999999999999999999999999888998864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9e-12  Score=69.23  Aligned_cols=43  Identities=30%  Similarity=0.546  Sum_probs=36.4

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888888888888888888888888888888888888863

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.8e-12  Score=69.26  Aligned_cols=43  Identities=28%  Similarity=0.468  Sum_probs=36.2

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888888888888888888888888888888888888863

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.5e-11  Score=67.58  Aligned_cols=41  Identities=22%  Similarity=0.340  Sum_probs=27.6

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCC
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPIS  235 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  235 (247)
                      |+++|.++++|+|.+|++.|.....|..|+++|.+++||.|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            44556666667777777777766667777666666666666

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.3e-11  Score=67.88  Aligned_cols=42  Identities=29%  Similarity=0.504  Sum_probs=36.0

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            566788888899988999999988999998888888888884

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=8.7e-12  Score=68.57  Aligned_cols=41  Identities=24%  Similarity=0.485  Sum_probs=32.4

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCC
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPIS  235 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  235 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            56677777888888888888888888888888887787776

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9.7e-12  Score=68.38  Aligned_cols=42  Identities=29%  Similarity=0.502  Sum_probs=36.5

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            567788888999999999999999999999999988888884

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.1e-11  Score=68.13  Aligned_cols=42  Identities=29%  Similarity=0.508  Sum_probs=35.8

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            566788888888888888888888888888888888888884

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2e-11  Score=67.11  Aligned_cols=41  Identities=29%  Similarity=0.521  Sum_probs=30.0

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCC
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPIS  235 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  235 (247)
                      |+++|++++||+|.+|++.|.+...|..|+++|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            55667777777777777777777777777777777777765

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=4.1e-11  Score=67.14  Aligned_cols=42  Identities=31%  Similarity=0.463  Sum_probs=39.7

Q ss_pred             hcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCcccc
Q psy2288         198 RHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKG  239 (247)
Q Consensus       198 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c~  239 (247)
                      .|.++++|+|.+|++.|.+...|..|+++|.+++||.|.+|+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            367789999999999999999999999999999999999997

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.3e-11  Score=67.84  Aligned_cols=42  Identities=29%  Similarity=0.532  Sum_probs=35.1

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.+++||.|+.|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            566778888888888888888888888888888888888874

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.2e-11  Score=68.66  Aligned_cols=42  Identities=33%  Similarity=0.562  Sum_probs=35.5

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            566778888888888888888888888888888888888886

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.11  E-value=1.7e-11  Score=66.58  Aligned_cols=41  Identities=27%  Similarity=0.438  Sum_probs=34.9

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeec
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC  207 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  207 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            45667888889999999999998999999988888888887

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=1.1e-11  Score=68.88  Aligned_cols=43  Identities=28%  Similarity=0.429  Sum_probs=36.0

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCC-CCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG-VQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++ ++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55677888888888888888888888888888888 88888864

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.1e-11  Score=68.83  Aligned_cols=43  Identities=30%  Similarity=0.528  Sum_probs=35.8

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|+++++|+|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888888888888888888888888888888888888863

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.6e-11  Score=68.23  Aligned_cols=42  Identities=31%  Similarity=0.580  Sum_probs=36.1

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566788888888988999999888899998888888888886

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.11  E-value=5.7e-11  Score=64.88  Aligned_cols=39  Identities=28%  Similarity=0.515  Sum_probs=23.7

Q ss_pred             hcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         198 RHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       198 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      +|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            355556666666666666666666666666666666654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=1.1e-10  Score=67.18  Aligned_cols=47  Identities=23%  Similarity=0.270  Sum_probs=42.3

Q ss_pred             hcCCCCCeecccccccccChHHHHHHHH-hccCCCCCCCccccCCCcC
Q psy2288         198 RHKGVQPYSCSHCDKTFFDAQSLNKHKL-SHKTSADPISSAKGSKLFG  244 (247)
Q Consensus       198 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~c~~c~~~~~~  244 (247)
                      .|.++++|+|++|++.|.+...|..|++ +|.+++||.|.+|+..|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4678899999999999999999999997 8999999999999876543

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.3e-11  Score=67.15  Aligned_cols=41  Identities=37%  Similarity=0.649  Sum_probs=34.6

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeec
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC  207 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  207 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45567888888888888888888888888888888888877

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1e-11  Score=67.48  Aligned_cols=41  Identities=34%  Similarity=0.660  Sum_probs=35.2

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeec
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC  207 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  207 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            55678888889999999999998899999888888888887

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.6e-11  Score=68.25  Aligned_cols=42  Identities=31%  Similarity=0.642  Sum_probs=34.2

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445677888888888888888888888888888888888886

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.6e-11  Score=67.44  Aligned_cols=42  Identities=21%  Similarity=0.328  Sum_probs=35.2

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            566778888888888888888888888888888888888874

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=2.7e-11  Score=66.57  Aligned_cols=42  Identities=24%  Similarity=0.351  Sum_probs=34.0

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            445677788888888888888888888888888888888874

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.4e-11  Score=67.04  Aligned_cols=41  Identities=32%  Similarity=0.620  Sum_probs=34.7

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeec
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC  207 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  207 (247)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45667888888888888888888888888888888888887

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.8e-11  Score=67.27  Aligned_cols=42  Identities=24%  Similarity=0.499  Sum_probs=25.6

Q ss_pred             HhcCCCCCeecc--cccccccChHHHHHHHHhccCCCCCCCccc
Q psy2288         197 NRHKGVQPYSCS--HCDKTFFDAQSLNKHKLSHKTSADPISSAK  238 (247)
Q Consensus       197 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c  238 (247)
                      ++|+++++|+|.  +|++.|.+...|..|+++|.+++||.|..|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445566666665  566666666666666666666666666554

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.08  E-value=6.7e-11  Score=64.59  Aligned_cols=40  Identities=23%  Similarity=0.379  Sum_probs=32.9

Q ss_pred             HhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         170 SHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       170 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      +|.++++|.|..|++.|.....|..|+++|++++||+|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4677888888888888888888888888888888888864

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=6.2e-11  Score=65.74  Aligned_cols=40  Identities=25%  Similarity=0.419  Sum_probs=24.9

Q ss_pred             HhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         197 NRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       197 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      ++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            3455666666666666666666666666666666666664

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.7e-11  Score=66.35  Aligned_cols=40  Identities=30%  Similarity=0.568  Sum_probs=25.0

Q ss_pred             HhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCc
Q psy2288         197 NRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISS  236 (247)
Q Consensus       197 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~  236 (247)
                      ++|+++++|+|.+|++.|.+...|..|+++|.+++||.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            3455666666666666666666666666666666666664

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=7e-11  Score=63.78  Aligned_cols=38  Identities=29%  Similarity=0.503  Sum_probs=24.3

Q ss_pred             hcCCCCCeecccccccccChHHHHHHHHhccCCCCCCC
Q psy2288         198 RHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPIS  235 (247)
Q Consensus       198 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  235 (247)
                      +|+++++|+|++|++.|.+...|..|+++|.+++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            45566666666666666666666666666666666655

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.5e-11  Score=68.28  Aligned_cols=42  Identities=31%  Similarity=0.566  Sum_probs=33.5

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556677788888888888888888888888888888888875

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.9e-11  Score=67.18  Aligned_cols=43  Identities=35%  Similarity=0.554  Sum_probs=36.8

Q ss_pred             HHHhCCCCCcccC--cCchhcccHHHHHHHHHhcCCCCCeecccc
Q psy2288         168 QRSHEGVKPFRCE--YCDKTFTRQIIMKEHLNRHKGVQPYSCSHC  210 (247)
Q Consensus       168 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  210 (247)
                      .++|.++++|.|.  .|++.|.....|..|+++|++++||+|.+|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3467788889997  799999999999999999999999999877

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=6.6e-11  Score=65.63  Aligned_cols=41  Identities=29%  Similarity=0.452  Sum_probs=33.1

Q ss_pred             HHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       169 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      ++|.++++|.|+.|++.|.+...|..|+++|++++||+|.+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            45677888888888888888888888888888888888863

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.9e-11  Score=66.26  Aligned_cols=41  Identities=32%  Similarity=0.513  Sum_probs=34.9

Q ss_pred             HHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeeccc
Q psy2288         169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSH  209 (247)
Q Consensus       169 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  209 (247)
                      ++|.++++|.|..|++.|.....|..|+++|+++++|+|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            45778888999999999999999999998898888888864

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2.1e-11  Score=66.99  Aligned_cols=42  Identities=26%  Similarity=0.408  Sum_probs=33.8

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||+|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            556677888888888888888888888888888888888773

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.6e-11  Score=64.96  Aligned_cols=42  Identities=31%  Similarity=0.547  Sum_probs=35.5

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            566788888889988998998888899998888888888763

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.2e-10  Score=62.75  Aligned_cols=38  Identities=26%  Similarity=0.527  Sum_probs=32.9

Q ss_pred             HhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeec
Q psy2288         170 SHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC  207 (247)
Q Consensus       170 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  207 (247)
                      +|.++++|.|+.|++.|.....|..|+++|++++||+|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            46788888999999999988899999888888888887

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1e-11  Score=76.64  Aligned_cols=65  Identities=18%  Similarity=0.386  Sum_probs=52.2

Q ss_pred             HHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhccCC
Q psy2288         163 DLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       163 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      .|..|+.++.+.+++.|+.|++.|. ...|..|+ .|.+++|+.|+.|++.|. ...|..|+.+|.++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            3456777778888888888888884 78888888 788888888888888876 47888888887665

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.98  E-value=1.8e-11  Score=72.67  Aligned_cols=49  Identities=12%  Similarity=0.207  Sum_probs=43.3

Q ss_pred             HHHHHHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccccCCCc
Q psy2288         192 MKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF  243 (247)
Q Consensus       192 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c~~~~~  243 (247)
                      |..|+++|++++||+|++||+.|.....|.   +.|.+++||.|.+||..|.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~   50 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVE   50 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCE
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccc
Confidence            346788999999999999999999988886   7899999999999987654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.93  E-value=9.5e-10  Score=58.47  Aligned_cols=37  Identities=27%  Similarity=0.504  Sum_probs=25.8

Q ss_pred             cCCCCCeecccccccccChHHHHHHHHhccCCCCCCC
Q psy2288         199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPIS  235 (247)
Q Consensus       199 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c  235 (247)
                      |+++++|+|.+|++.|.+.+.|..|+++|.+++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4566777777777777777777777777777777654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=6.2e-10  Score=58.41  Aligned_cols=36  Identities=19%  Similarity=0.491  Sum_probs=26.7

Q ss_pred             HhcCCCCCeecccccccccChHHHHHHHHhccCCCC
Q psy2288         197 NRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSAD  232 (247)
Q Consensus       197 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  232 (247)
                      ++|++++||+|.+|++.|.+...|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            356777777777777777777777777777776654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=3.2e-09  Score=62.64  Aligned_cols=44  Identities=27%  Similarity=0.391  Sum_probs=30.2

Q ss_pred             cCCCCCeeccc--ccccccChHHHHHHH-HhccCCCCCCCccccCCC
Q psy2288         199 HKGVQPYSCSH--CDKTFFDAQSLNKHK-LSHKTSADPISSAKGSKL  242 (247)
Q Consensus       199 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~c~~c~~~~  242 (247)
                      ..|++||+|..  |++.|.+.+.|..|+ ++|++++|+-|..-++..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~~~~~   68 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEVEEES   68 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccccccc
Confidence            35677777754  777777777777776 567777777777655543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.88  E-value=5.7e-10  Score=58.57  Aligned_cols=35  Identities=26%  Similarity=0.681  Sum_probs=24.3

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccC
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      |+++|++++||+|++|++.|.+...|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            45566777777777777777777777777776654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.85  E-value=2.2e-09  Score=55.46  Aligned_cols=34  Identities=26%  Similarity=0.464  Sum_probs=23.2

Q ss_pred             cCCCCCeecccccccccChHHHHHHHHhccCCCC
Q psy2288         199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSAD  232 (247)
Q Consensus       199 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  232 (247)
                      |+++++|+|.+|++.|.+...|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5566677777777777777777777777766543

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=8.3e-11  Score=72.51  Aligned_cols=64  Identities=19%  Similarity=0.296  Sum_probs=44.5

Q ss_pred             HHHHHHHhCCCCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         136 LRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       136 l~~h~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      |..|+..+.+++++.|+.|+..|. .+.|..|+ .+.++++|.|+.|++.|. ...|..|++++.++
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            444555666777777777777773 67777777 677777777777777665 36777777777664

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.83  E-value=2.8e-09  Score=55.07  Aligned_cols=34  Identities=21%  Similarity=0.481  Sum_probs=23.6

Q ss_pred             cCCCCCeecccccccccChHHHHHHHHhccCCCC
Q psy2288         199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSAD  232 (247)
Q Consensus       199 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  232 (247)
                      |.++++|+|.+|++.|.+...|..|+++|.+++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5666777777777777777777777777766553

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.82  E-value=2.4e-09  Score=56.85  Aligned_cols=37  Identities=16%  Similarity=0.421  Sum_probs=27.1

Q ss_pred             hCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeec
Q psy2288         171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSC  207 (247)
Q Consensus       171 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  207 (247)
                      |.++++|.|..|++.|.....|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3466777777777777777777777777777777654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=1.5e-10  Score=73.53  Aligned_cols=57  Identities=14%  Similarity=0.251  Sum_probs=41.2

Q ss_pred             HHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhccC
Q psy2288         169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       169 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      .+|.++++|.|+.|++.|.....|..|+++|++++||+|..|..    ...|..|.+.|.+
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccccc
Confidence            45777888888888888888888888888888888888876554    3345556656544

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=7.5e-09  Score=54.35  Aligned_cols=32  Identities=22%  Similarity=0.265  Sum_probs=21.1

Q ss_pred             cCCCCCeeccc--ccccccChHHHHHHHHhccCC
Q psy2288         199 HKGVQPYSCSH--CDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       199 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      +++++||+|++  |++.|.+.+.|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45666677764  777777777777777666554

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.74  E-value=3.6e-09  Score=55.39  Aligned_cols=36  Identities=39%  Similarity=0.760  Sum_probs=29.2

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      |+++|.+++||.|+.|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            456778888888888888888888888888888764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.74  E-value=8.9e-09  Score=52.40  Aligned_cols=31  Identities=26%  Similarity=0.587  Sum_probs=18.1

Q ss_pred             CeecccccccccChHHHHHHHHhccCCCCCC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKTSADPI  234 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  234 (247)
                      ||+|++|++.|.+...|..|+++|.+++|+.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            4556666666666666666666665555553

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=9.6e-09  Score=60.60  Aligned_cols=39  Identities=28%  Similarity=0.394  Sum_probs=30.5

Q ss_pred             hCCCCCcccCc--CchhcccHHHHHHHH-HhcCCCCCeeccc
Q psy2288         171 HEGVKPFRCEY--CDKTFTRQIIMKEHL-NRHKGVQPYSCSH  209 (247)
Q Consensus       171 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~  209 (247)
                      ..+++||.|..  |+++|.....|..|+ ++|++++||.|.+
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            45778888864  888888888888886 5788888888865

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=3.2e-09  Score=55.56  Aligned_cols=35  Identities=20%  Similarity=0.549  Sum_probs=27.6

Q ss_pred             HhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCC
Q psy2288         170 SHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQP  204 (247)
Q Consensus       170 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  204 (247)
                      +|.++++|.|..|++.|.....|..|+++|++++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            46777888888888888888888888888877654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.73  E-value=8.6e-09  Score=53.09  Aligned_cols=34  Identities=24%  Similarity=0.571  Sum_probs=27.4

Q ss_pred             hCCCCCcccCcCchhcccHHHHHHHHHhcCCCCC
Q psy2288         171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQP  204 (247)
Q Consensus       171 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  204 (247)
                      |.++++|.|+.|++.|.....|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5677888888888888888888888888887754

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.71  E-value=1.1e-08  Score=52.04  Aligned_cols=32  Identities=25%  Similarity=0.444  Sum_probs=23.1

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcCCCCCee
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYS  206 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  206 (247)
                      +||.|+.|++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            36777777777777777777777777777664

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.69  E-value=1.2e-08  Score=52.55  Aligned_cols=34  Identities=29%  Similarity=0.586  Sum_probs=27.3

Q ss_pred             hCCCCCcccCcCchhcccHHHHHHHHHhcCCCCC
Q psy2288         171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQP  204 (247)
Q Consensus       171 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  204 (247)
                      |.++++|.|..|++.|.....|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5677888888888888888888888888887654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.2e-08  Score=52.93  Aligned_cols=33  Identities=24%  Similarity=0.453  Sum_probs=22.5

Q ss_pred             hcCCCCCeecccccccccChHHHHHHHHhccCC
Q psy2288         198 RHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       198 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      +|.+++||+|++|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            356667777777777777777777777766554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.3e-08  Score=52.76  Aligned_cols=33  Identities=24%  Similarity=0.412  Sum_probs=22.3

Q ss_pred             hcCCCCCeecccccccccChHHHHHHHHhccCC
Q psy2288         198 RHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       198 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      +|.+++||+|.+|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            356666777777777777777777777666554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=6.9e-09  Score=54.33  Aligned_cols=33  Identities=21%  Similarity=0.431  Sum_probs=22.8

Q ss_pred             HhcCCCCCeecccccccccChHHHHHH-HHhccC
Q psy2288         197 NRHKGVQPYSCSHCDKTFFDAQSLNKH-KLSHKT  229 (247)
Q Consensus       197 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  229 (247)
                      ++|++++||+|.+|++.|.....|..| ++.|.+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            356667777777777777777777777 666654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.1e-08  Score=53.51  Aligned_cols=33  Identities=21%  Similarity=0.448  Sum_probs=24.4

Q ss_pred             hcCCCCCeecccccccccCh-HHHHHHHHhccCC
Q psy2288         198 RHKGVQPYSCSHCDKTFFDA-QSLNKHKLSHKTS  230 (247)
Q Consensus       198 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~  230 (247)
                      +|.+++||+|++|++.|... ..|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            46677777777777777777 7777777777654

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.2e-08  Score=52.98  Aligned_cols=33  Identities=21%  Similarity=0.468  Sum_probs=21.8

Q ss_pred             hcCCCCCeecccccccccChHHHHHHHHhccCC
Q psy2288         198 RHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       198 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      .|.+++||+|.+|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            355666677777777777777777776666544

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.66  E-value=1.9e-08  Score=52.85  Aligned_cols=35  Identities=23%  Similarity=0.508  Sum_probs=24.2

Q ss_pred             cCCCCCeecc--cccccccChHHHHHHHHhccCCCCC
Q psy2288         199 HKGVQPYSCS--HCDKTFFDAQSLNKHKLSHKTSADP  233 (247)
Q Consensus       199 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  233 (247)
                      |+++++|+|.  .|++.|.+...|..|+++|.+++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4566777777  4777777777777777777766665

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.66  E-value=8.6e-09  Score=53.30  Aligned_cols=26  Identities=19%  Similarity=0.422  Sum_probs=18.3

Q ss_pred             cCCCCCeecccccccccChHHHHHHH
Q psy2288         199 HKGVQPYSCSHCDKTFFDAQSLNKHK  224 (247)
Q Consensus       199 h~~~~~~~C~~C~~~f~~~~~l~~H~  224 (247)
                      +.+++||+|++||+.|.+.+.|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            35667777777777777777777776

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=1.3e-09  Score=69.15  Aligned_cols=45  Identities=18%  Similarity=0.312  Sum_probs=41.8

Q ss_pred             HHhcCCCCCeecccccccccChHHHHHHHHhccCCCCCCCccccC
Q psy2288         196 LNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGS  240 (247)
Q Consensus       196 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c~~  240 (247)
                      .++|++++||+|++|++.|.+...|..|+++|.+++||+|..|..
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~   61 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER   61 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh
Confidence            456899999999999999999999999999999999999998864

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=2.4e-08  Score=51.69  Aligned_cols=32  Identities=28%  Similarity=0.482  Sum_probs=21.0

Q ss_pred             cCCCCCeecccccccccChHHHHHHHHhccCC
Q psy2288         199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       199 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      |.++++|+|.+|++.|.+...|..|+++|.++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            55666666666666666666666666666554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=3.3e-08  Score=51.21  Aligned_cols=32  Identities=25%  Similarity=0.427  Sum_probs=20.8

Q ss_pred             cCCCCCeecccccccccChHHHHHHHHhccCC
Q psy2288         199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       199 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      |.++++|+|++|++.|.....|..|+++|.++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            45566666666666666666666666666554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=3.3e-08  Score=51.86  Aligned_cols=32  Identities=19%  Similarity=0.404  Sum_probs=25.8

Q ss_pred             hCCCCCcccCc--CchhcccHHHHHHHHHhcCCC
Q psy2288         171 HEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       171 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +.+++||.|+.  |+++|.....|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56778888875  888888888888888888775

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.58  E-value=2.9e-08  Score=55.26  Aligned_cols=36  Identities=25%  Similarity=0.515  Sum_probs=22.9

Q ss_pred             hcCCCCCeecccccccccChHHHHHHHH-hccCCCCC
Q psy2288         198 RHKGVQPYSCSHCDKTFFDAQSLNKHKL-SHKTSADP  233 (247)
Q Consensus       198 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~  233 (247)
                      +|++++||+|.+|++.|.....|..|++ +|.++...
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            3667777777777777777777777777 67665443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.55  E-value=3.9e-08  Score=51.64  Aligned_cols=35  Identities=26%  Similarity=0.500  Sum_probs=26.6

Q ss_pred             hCCCCCcccC--cCchhcccHHHHHHHHHhcCCCCCe
Q psy2288         171 HEGVKPFRCE--YCDKTFTRQIIMKEHLNRHKGVQPY  205 (247)
Q Consensus       171 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  205 (247)
                      |.++++|.|.  .|++.|.....|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            3567778887  4888888888888888888777765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=5.3e-08  Score=50.36  Aligned_cols=33  Identities=27%  Similarity=0.559  Sum_probs=26.3

Q ss_pred             HhCCCCCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         170 SHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       170 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +|.++++|.|+.|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            366778888888888888888888888888765

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=6.3e-08  Score=50.11  Aligned_cols=33  Identities=33%  Similarity=0.644  Sum_probs=26.6

Q ss_pred             HhCCCCCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         170 SHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       170 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +|.++++|.|+.|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            366778888888888888888888888888765

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=5.5e-08  Score=50.35  Aligned_cols=33  Identities=18%  Similarity=0.416  Sum_probs=26.8

Q ss_pred             HhCCCCCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         170 SHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       170 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      .|.++++|.|..|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            356778888888888888888888888888765

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=8.5e-08  Score=49.55  Aligned_cols=32  Identities=25%  Similarity=0.394  Sum_probs=24.5

Q ss_pred             hCCCCCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       171 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      |.++++|.|+.|++.|.....|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            56677788888888888888888888777765

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=3.4e-08  Score=51.59  Aligned_cols=34  Identities=18%  Similarity=0.423  Sum_probs=26.9

Q ss_pred             HHhCCCCCcccCcCchhcccHHHHHHH-HHhcCCC
Q psy2288         169 RSHEGVKPFRCEYCDKTFTRQIIMKEH-LNRHKGV  202 (247)
Q Consensus       169 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  202 (247)
                      ++|.+++||.|+.|++.|.....|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            356778888888888888888888888 7777764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.49  E-value=9.4e-08  Score=49.83  Aligned_cols=32  Identities=19%  Similarity=0.259  Sum_probs=22.6

Q ss_pred             cCCCCCeeccc--ccccccChHHHHHHHHhccCC
Q psy2288         199 HKGVQPYSCSH--CDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       199 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      |++++||+|.+  |++.|.+.+.|..|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56677777764  777777777777777777654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=4.2e-08  Score=51.15  Aligned_cols=33  Identities=30%  Similarity=0.666  Sum_probs=24.8

Q ss_pred             HhCCCCCcccCcCchhcccH-HHHHHHHHhcCCC
Q psy2288         170 SHEGVKPFRCEYCDKTFTRQ-IIMKEHLNRHKGV  202 (247)
Q Consensus       170 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~  202 (247)
                      +|.++++|.|+.|++.|... ..|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            46677777888888888777 7788887777665

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=1.1e-07  Score=49.13  Aligned_cols=32  Identities=34%  Similarity=0.639  Sum_probs=25.3

Q ss_pred             hCCCCCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       171 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      |.++++|.|+.|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            56677888888888888888888888888765

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.47  E-value=5.2e-08  Score=50.33  Aligned_cols=25  Identities=20%  Similarity=0.376  Sum_probs=16.6

Q ss_pred             CCCCCcccCcCchhcccHHHHHHHH
Q psy2288         172 EGVKPFRCEYCDKTFTRQIIMKEHL  196 (247)
Q Consensus       172 ~~~~~~~C~~C~~~f~~~~~l~~H~  196 (247)
                      .+++||.|+.|+++|.+.+.|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4566666666666666666666665

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.43  E-value=1.7e-07  Score=46.00  Aligned_cols=28  Identities=36%  Similarity=0.769  Sum_probs=16.8

Q ss_pred             CCeecccccccccChHHHHHHHHhccCC
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      +||+|.+|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4566666666666666666666665543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.43  E-value=1.7e-08  Score=55.90  Aligned_cols=37  Identities=19%  Similarity=0.395  Sum_probs=28.2

Q ss_pred             HHHHhcCCCCCeecc--cccccccChHHHHHHHHhccCC
Q psy2288         194 EHLNRHKGVQPYSCS--HCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       194 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      .|+..|++++||+|.  .|++.|.+.+.|..|+++|.++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            445567888888885  6888888888888888888765

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.41  E-value=1.3e-08  Score=51.38  Aligned_cols=29  Identities=28%  Similarity=0.496  Sum_probs=13.8

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcCCCCC
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHKGVQP  204 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  204 (247)
                      ||.|+.|++.|.....|..|+++|++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            34444444444444444444444444443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.41  E-value=1.3e-07  Score=52.51  Aligned_cols=34  Identities=21%  Similarity=0.518  Sum_probs=26.0

Q ss_pred             HhCCCCCcccCcCchhcccHHHHHHHHH-hcCCCC
Q psy2288         170 SHEGVKPFRCEYCDKTFTRQIIMKEHLN-RHKGVQ  203 (247)
Q Consensus       170 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~  203 (247)
                      +|.++++|.|..|++.|.....|..|++ +|+++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            3677888888888888888888888888 787764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.41  E-value=1.7e-07  Score=45.70  Aligned_cols=27  Identities=30%  Similarity=0.714  Sum_probs=17.4

Q ss_pred             CeecccccccccChHHHHHHHHhccCC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      ||.|++|++.|.+...|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666544

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.40  E-value=2.1e-07  Score=45.30  Aligned_cols=27  Identities=26%  Similarity=0.653  Sum_probs=15.9

Q ss_pred             CeecccccccccChHHHHHHHHhccCC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      ||+|++|++.|.....|..|+++|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            456666666666666666666655443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.40  E-value=1e-08  Score=51.72  Aligned_cols=31  Identities=23%  Similarity=0.477  Sum_probs=29.1

Q ss_pred             CCeecccccccccChHHHHHHHHhccCCCCC
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSHKTSADP  233 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  233 (247)
                      +||+|.+|++.|.+.+.|..|+++|.+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4799999999999999999999999999876

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.39  E-value=2.3e-07  Score=45.52  Aligned_cols=28  Identities=21%  Similarity=0.490  Sum_probs=18.0

Q ss_pred             CeecccccccccChHHHHHHHHhccCCC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKTSA  231 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  231 (247)
                      +|+|++|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5666666666666666666666665554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.37  E-value=3.1e-07  Score=54.48  Aligned_cols=31  Identities=23%  Similarity=0.427  Sum_probs=15.9

Q ss_pred             CCCCCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         172 EGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       172 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      .+++||.|..|++.|.+...|..|+++|+++
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            3445555555555555555555555555443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.36  E-value=2.8e-07  Score=44.13  Aligned_cols=25  Identities=36%  Similarity=0.716  Sum_probs=15.9

Q ss_pred             CCeecccccccccChHHHHHHHHhc
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      +||+|.+||+.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4566666666666666666666655

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.36  E-value=2.4e-07  Score=44.78  Aligned_cols=26  Identities=38%  Similarity=0.733  Sum_probs=15.8

Q ss_pred             CCeecccccccccChHHHHHHHHhcc
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h~  228 (247)
                      +||+|++|++.|.+...|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45666666666666666666665553

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.35  E-value=2.8e-07  Score=44.81  Aligned_cols=27  Identities=30%  Similarity=0.650  Sum_probs=17.1

Q ss_pred             CeecccccccccChHHHHHHHHhccCC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      ||+|++|++.|.+...|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            566666666666666666666666544

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.35  E-value=3.2e-07  Score=44.97  Aligned_cols=28  Identities=32%  Similarity=0.852  Sum_probs=21.1

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            5677777777777777777777777765

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.35  E-value=2.1e-07  Score=44.65  Aligned_cols=25  Identities=28%  Similarity=0.578  Sum_probs=16.5

Q ss_pred             CCeecccccccccChHHHHHHHHhc
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      +||+|++||+.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4666666666666666666666655

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.33  E-value=4.3e-07  Score=44.13  Aligned_cols=28  Identities=36%  Similarity=0.763  Sum_probs=19.8

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            3567777777777777777777777664

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.33  E-value=4e-07  Score=45.54  Aligned_cols=28  Identities=46%  Similarity=0.935  Sum_probs=16.8

Q ss_pred             CCeecc--cccccccChHHHHHHHHhccCC
Q psy2288         203 QPYSCS--HCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       203 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      +||+|.  .|++.|.+...|..|+++|.++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            456665  5666666666666666666543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.32  E-value=3.2e-07  Score=47.72  Aligned_cols=32  Identities=25%  Similarity=0.516  Sum_probs=24.3

Q ss_pred             hCCCCCcccCc--CchhcccHHHHHHHHHhcCCC
Q psy2288         171 HEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       171 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      |.++++|.|..  |++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45677788874  888888888888888877765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.32  E-value=2.9e-07  Score=44.73  Aligned_cols=27  Identities=33%  Similarity=0.605  Sum_probs=17.8

Q ss_pred             CeecccccccccChHHHHHHHHhccCC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      ||+|++|++.|.....|..|+++|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            566666666666666666666666554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.31  E-value=3e-07  Score=44.77  Aligned_cols=28  Identities=29%  Similarity=0.485  Sum_probs=19.8

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3567777777777777777777777664

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.29  E-value=4.5e-07  Score=44.99  Aligned_cols=27  Identities=33%  Similarity=0.796  Sum_probs=14.8

Q ss_pred             Ceecc--cccccccChHHHHHHHHhccCC
Q psy2288         204 PYSCS--HCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       204 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      ||+|+  .||+.|.+...|..|+++|.++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45554  5555555555555555555443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.28  E-value=4.6e-07  Score=43.69  Aligned_cols=28  Identities=32%  Similarity=0.810  Sum_probs=20.8

Q ss_pred             CCCcccCcCchhcccHHHHHHHHHhcCC
Q psy2288         174 VKPFRCEYCDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       174 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  201 (247)
                      +++|.|+.|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3567788888888888888888777654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.61  E-value=9.9e-08  Score=46.63  Aligned_cols=26  Identities=38%  Similarity=0.648  Sum_probs=15.1

Q ss_pred             CeecccccccccChHHHHHHHHhccC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      ||+|++|++.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            45566666666655566666555544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.27  E-value=3.6e-07  Score=43.64  Aligned_cols=25  Identities=32%  Similarity=0.922  Sum_probs=14.0

Q ss_pred             CeecccccccccChHHHHHHHHhcc
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~  228 (247)
                      ||+|.+|++.|.+...|..|+++|.
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcC
Confidence            3555556666655555655555554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.27  E-value=5.2e-07  Score=44.15  Aligned_cols=28  Identities=18%  Similarity=0.577  Sum_probs=17.8

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcCCCC
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHKGVQ  203 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  203 (247)
                      +|.|+.|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5666666666666666666666666543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.25  E-value=6.9e-07  Score=44.27  Aligned_cols=28  Identities=43%  Similarity=0.914  Sum_probs=20.9

Q ss_pred             CCcccC--cCchhcccHHHHHHHHHhcCCC
Q psy2288         175 KPFRCE--YCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       175 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +||.|+  .|++.|.....|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            467776  7777777777777787777765

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.25  E-value=5.1e-07  Score=43.83  Aligned_cols=28  Identities=39%  Similarity=0.744  Sum_probs=20.3

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      ++|.|+.|++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            3577777777777777777777777665

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.25  E-value=6.8e-07  Score=42.69  Aligned_cols=26  Identities=35%  Similarity=0.686  Sum_probs=18.8

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHK  200 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~  200 (247)
                      +||.|+.|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            56777777777777777777777663

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.57  E-value=1.2e-07  Score=46.61  Aligned_cols=27  Identities=37%  Similarity=0.854  Sum_probs=15.9

Q ss_pred             CCeecccccccccChHHHHHHHHhccC
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      +||+|.+|++.|.+...|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            455666666666666666666655544

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.25  E-value=1.1e-06  Score=52.12  Aligned_cols=33  Identities=27%  Similarity=0.542  Sum_probs=23.8

Q ss_pred             cCCCCCeecccccccccChHHHHHHHHhccCCC
Q psy2288         199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTSA  231 (247)
Q Consensus       199 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  231 (247)
                      +.+++||+|.+|++.|.+...|..|+++|++++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            455677777777777777777777777776654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.24  E-value=8.1e-07  Score=44.33  Aligned_cols=28  Identities=32%  Similarity=0.743  Sum_probs=19.8

Q ss_pred             CCcccC--cCchhcccHHHHHHHHHhcCCC
Q psy2288         175 KPFRCE--YCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       175 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +||.|.  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            567776  6777777777777777777665

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.23  E-value=5.2e-07  Score=43.21  Aligned_cols=25  Identities=28%  Similarity=0.700  Sum_probs=18.7

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhc
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRH  199 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h  199 (247)
                      +||.|+.|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            5677777777777777777777765

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.52  E-value=1.8e-07  Score=45.69  Aligned_cols=28  Identities=36%  Similarity=0.769  Sum_probs=21.0

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3677777888888777788887777665

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.20  E-value=5.1e-07  Score=43.79  Aligned_cols=27  Identities=33%  Similarity=0.575  Sum_probs=17.0

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            566666666666666666666666554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.19  E-value=7.8e-07  Score=42.40  Aligned_cols=26  Identities=23%  Similarity=0.768  Sum_probs=18.5

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcCC
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~~  201 (247)
                      ||.|..|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46777777777777777777777765

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.15  E-value=8.3e-07  Score=43.47  Aligned_cols=26  Identities=27%  Similarity=0.659  Sum_probs=14.7

Q ss_pred             CeecccccccccChHHHHHH-HHhccC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKH-KLSHKT  229 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H-~~~h~~  229 (247)
                      ||+|+.|++.|.+...|..| +++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            45566666666666666666 455544

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.45  E-value=2.7e-07  Score=45.33  Aligned_cols=28  Identities=29%  Similarity=0.698  Sum_probs=20.5

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5677777777777777777777777654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.43  E-value=2.8e-07  Score=43.66  Aligned_cols=24  Identities=38%  Similarity=0.872  Sum_probs=14.9

Q ss_pred             CeecccccccccChHHHHHHHHhc
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      ||+|++||+.|.+...|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            566666666666666666666554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.12  E-value=1.9e-07  Score=51.57  Aligned_cols=34  Identities=29%  Similarity=0.484  Sum_probs=23.9

Q ss_pred             HHhCCCCCcccC--cCchhcccHHHHHHHHHhcCCC
Q psy2288         169 RSHEGVKPFRCE--YCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       169 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      ..|.+++||.|.  .|++.|.....|..|+++|+++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            446677777774  5777777777777777777665

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.08  E-value=1.4e-06  Score=42.59  Aligned_cols=28  Identities=32%  Similarity=0.771  Sum_probs=18.8

Q ss_pred             CCcccCcCchhcccHHHHHHH-HHhcCCC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEH-LNRHKGV  202 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  202 (247)
                      +||.|+.|++.|.....|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            356777777777777777777 4666654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.30  E-value=6.2e-07  Score=42.42  Aligned_cols=25  Identities=36%  Similarity=0.877  Sum_probs=17.8

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhc
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRH  199 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h  199 (247)
                      +||.|+.|++.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3567777777777777777777665

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.97  E-value=4.5e-06  Score=40.28  Aligned_cols=25  Identities=40%  Similarity=0.864  Sum_probs=15.6

Q ss_pred             Ceecc--cccccccChHHHHHHHHhcc
Q psy2288         204 PYSCS--HCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       204 ~~~C~--~C~~~f~~~~~l~~H~~~h~  228 (247)
                      +|.|.  +|++.|.+.+.|..|+++|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            46666  66666666666666666553

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.91  E-value=6.3e-06  Score=39.72  Aligned_cols=27  Identities=22%  Similarity=0.610  Sum_probs=19.3

Q ss_pred             CCcccC--cCchhcccHHHHHHHHHhcCC
Q psy2288         175 KPFRCE--YCDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       175 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  201 (247)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            356777  777777777777777777653

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.75  E-value=6.7e-05  Score=44.04  Aligned_cols=46  Identities=24%  Similarity=0.455  Sum_probs=29.0

Q ss_pred             CchhcccHHHHHHHH-HhcCCCC------Ceecc--cccccccChHHHHHHHHhc
Q psy2288         182 CDKTFTRQIIMKEHL-NRHKGVQ------PYSCS--HCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       182 C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h  227 (247)
                      |++.|.+...|..|+ +.|.+.+      +|.|.  .|+..+.....|..|+++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            666666666666666 3454443      57775  4777666666777776654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.55  E-value=0.00018  Score=42.14  Aligned_cols=48  Identities=29%  Similarity=0.482  Sum_probs=33.4

Q ss_pred             CCCccccCChHHHHHHHH-HhCCCC------CcccC--cCchhcccHHHHHHHHHhc
Q psy2288         152 NVCPFKFTTKSDLQRHQR-SHEGVK------PFRCE--YCDKTFTRQIIMKEHLNRH  199 (247)
Q Consensus       152 ~~C~~~~~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h  199 (247)
                      ..|++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|+++.
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            457777777777777763 555443      67785  5888777777888887764

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.40  E-value=0.00034  Score=49.82  Aligned_cols=54  Identities=15%  Similarity=0.212  Sum_probs=23.0

Q ss_pred             CccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         147 RHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       147 ~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      .+..|+.|+..+ ....|..|....-..++..|+.|+..+.. ..|..|..++.|.
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~  162 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLA  162 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC-
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcCh
Confidence            344454444444 23344444444444444444444443332 2344444444443

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.81  E-value=0.0013  Score=44.31  Aligned_cols=77  Identities=18%  Similarity=0.302  Sum_probs=50.2

Q ss_pred             CCccccCCCccccCChHHHHHHH--HHhCCC-CCcccCc------CchhcccHHHHHHHHHhcCCCCCeecccccccccC
Q psy2288         146 IRHFACNVCPFKFTTKSDLQRHQ--RSHEGV-KPFRCEY------CDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFD  216 (247)
Q Consensus       146 ~~~~~C~~C~~~~~~~~~l~~H~--~~h~~~-~~~~C~~------C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  216 (247)
                      .+++.|..|+..|.+.+.+..|.  +.|... +.+.+..      =+..+...    .+...+.+...|-|.+|+..|.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PAEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SSCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----ccccccCCCCCeEcCCCCCEeCC
Confidence            36789999999999999999998  344321 1222210      01111111    01123455677999999999999


Q ss_pred             hHHHHHHHHh
Q psy2288         217 AQSLNKHKLS  226 (247)
Q Consensus       217 ~~~l~~H~~~  226 (247)
                      ...|..|+..
T Consensus       106 ~~~~~~H~~g  115 (127)
T 1zu1_A          106 PVVAESHYIG  115 (127)
T ss_dssp             HHHHHHHHTS
T ss_pred             HHHHHHHHCC
Confidence            9999999854

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.70  E-value=0.00033  Score=46.48  Aligned_cols=28  Identities=29%  Similarity=0.453  Sum_probs=15.9

Q ss_pred             cCCCCCeecccccccccChHHHHHHHHh
Q psy2288         199 HKGVQPYSCSHCDKTFFDAQSLNKHKLS  226 (247)
Q Consensus       199 h~~~~~~~C~~C~~~f~~~~~l~~H~~~  226 (247)
                      |+|+++|.|..|++.|.+...|..|+++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            4555555555555555555555555544

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.63  E-value=0.00097  Score=47.46  Aligned_cols=83  Identities=18%  Similarity=0.393  Sum_probs=59.5

Q ss_pred             Ccccc--CCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHH
Q psy2288         147 RHFAC--NVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHK  224 (247)
Q Consensus       147 ~~~~C--~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  224 (247)
                      ....|  ..|+..+. ...+..|. ..-...+..|+.|+..+ .+..|..|+...-..++..|+.|+..+. ...|..|.
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~-~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~  156 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQ-AHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHD  156 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHH-TTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHH
T ss_pred             cccCCCCCCCCceec-HhHHHHHH-hcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHH
Confidence            34456  34665543 45677776 34455678899999887 5667999998888888899999999885 56789999


Q ss_pred             HhccCCCCC
Q psy2288         225 LSHKTSADP  233 (247)
Q Consensus       225 ~~h~~~~~~  233 (247)
                      ..+.++.++
T Consensus       157 ~~~~~~~~~  165 (170)
T 3hcs_A          157 QNCPLALEH  165 (170)
T ss_dssp             TTCCC----
T ss_pred             HhCcChhhh
Confidence            998887654

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.25  E-value=0.0058  Score=41.08  Aligned_cols=77  Identities=22%  Similarity=0.361  Sum_probs=50.1

Q ss_pred             CCCeecCcCcccccChhHHHHHHH--HhCCC-CccccCC------CccccCChHHHHHHHHHhCCCCCcccCcCchhccc
Q psy2288         118 VKPHICKQCGHAFTQKSQLRLHEM--RHGNI-RHFACNV------CPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTR  188 (247)
Q Consensus       118 ~~~~~C~~C~~~f~~~~~l~~h~~--~~~~~-~~~~C~~------C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  188 (247)
                      .+++.|.+|+..|.+...+..|..  .|... +.+.+..      =+..+....    +.....+...|.|.+|+..|.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCC
Confidence            467899999999999999999973  33211 1222210      011221110    1123456778999999999999


Q ss_pred             HHHHHHHHHh
Q psy2288         189 QIIMKEHLNR  198 (247)
Q Consensus       189 ~~~l~~H~~~  198 (247)
                      ...|..|+..
T Consensus       106 ~~~~~~H~~g  115 (127)
T 1zu1_A          106 PVVAESHYIG  115 (127)
T ss_dssp             HHHHHHHHTS
T ss_pred             HHHHHHHHCC
Confidence            9999999853

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.01  E-value=0.0013  Score=43.63  Aligned_cols=29  Identities=24%  Similarity=0.438  Sum_probs=22.4

Q ss_pred             HhCCCCCcccCcCchhcccHHHHHHHHHh
Q psy2288         170 SHEGVKPFRCEYCDKTFTRQIIMKEHLNR  198 (247)
Q Consensus       170 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  198 (247)
                      .+.|+++|.|..|++.|.+...|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            35677788888888888888888888765

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.81  E-value=0.0061  Score=32.38  Aligned_cols=22  Identities=18%  Similarity=0.439  Sum_probs=13.8

Q ss_pred             CcccCcCchhcccHHHHHHHHH
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLN  197 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~  197 (247)
                      +|.|+.|+..|.....|+.||+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            4566666666666666666665

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.63  E-value=0.0078  Score=31.96  Aligned_cols=25  Identities=20%  Similarity=0.367  Sum_probs=22.7

Q ss_pred             CCeecccccccccChHHHHHHHHhc
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      .+|.|+.|+..|.....|..||+--
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            5799999999999999999999743

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.32  E-value=0.016  Score=28.74  Aligned_cols=27  Identities=26%  Similarity=0.431  Sum_probs=19.8

Q ss_pred             CeecccccccccChHHHHHHHHhccCC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      .|.||+|-+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            378888888888888888887665443

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=92.47  E-value=0.14  Score=25.34  Aligned_cols=26  Identities=23%  Similarity=0.299  Sum_probs=20.2

Q ss_pred             ceecccccccccCHHHHHHHHHHhCC
Q psy2288          36 SLACNICSMVFCDEIVLNKHVEEHST   61 (247)
Q Consensus        36 ~~~C~~C~~~~~~~~~l~~H~~~~~~   61 (247)
                      .+.||.|.+.+.+...|..|....|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            47888888888888888888776554

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=88.66  E-value=0.82  Score=24.97  Aligned_cols=45  Identities=18%  Similarity=0.324  Sum_probs=25.0

Q ss_pred             ecccccccccCHHHHHHHHHHhCCCCceeccccc-cccCChHHHHHHHh
Q psy2288          38 ACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCK-KVFNNIKSLKTHSR   85 (247)
Q Consensus        38 ~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~-~~f~~~~~l~~H~~   85 (247)
                      +|.+|.....+...|..|...-..   -+||+|- ....+.+.|..|.+
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~---gqCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCIN---GQCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTT---TBCTTTCCBCCSSHHHHHHHHT
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCC---CCCCcccCcCCcCHHHHHHHHH
Confidence            466666666666666666665432   2466663 33455566666644

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=88.27  E-value=0.079  Score=31.59  Aligned_cols=15  Identities=20%  Similarity=0.782  Sum_probs=11.9

Q ss_pred             CCeecccccccccCh
Q psy2288         203 QPYSCSHCDKTFFDA  217 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~  217 (247)
                      ..|+||.||..|..+
T Consensus        50 F~FkCP~CgEEFyG~   64 (95)
T 2k5c_A           50 FVFKCPVCGEEFYGK   64 (95)
T ss_dssp             SEEECTTTCCEEETT
T ss_pred             HhhcCCCccHHHhcc
Confidence            468999999988654

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=87.86  E-value=0.38  Score=28.80  Aligned_cols=38  Identities=26%  Similarity=0.625  Sum_probs=15.2

Q ss_pred             eeCCCCCcccCChhHHHHHHHHhcCCCCeecCcCccccc
Q psy2288          93 FRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFT  131 (247)
Q Consensus        93 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~  131 (247)
                      |.|..|+..+. +..+..|+..-.+...|.|..|+..|.
T Consensus        11 F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeC
Confidence            44444444332 223444433322223344444444443

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=87.15  E-value=0.96  Score=22.46  Aligned_cols=23  Identities=30%  Similarity=0.436  Sum_probs=12.1

Q ss_pred             CeecccccccccChHHHHHHHHh
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLS  226 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~  226 (247)
                      .+.|..|+-.|++...+..|++-
T Consensus         8 ~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            8 KKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCeeccccceehhhHHHhhhhee
Confidence            34555555555555555555443

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=86.53  E-value=2.2  Score=23.32  Aligned_cols=45  Identities=29%  Similarity=0.429  Sum_probs=22.3

Q ss_pred             ecCcCcccccChhHHHHHHHHhCCCCccccCCCccc-cCChHHHHHHHH
Q psy2288         122 ICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFK-FTTKSDLQRHQR  169 (247)
Q Consensus       122 ~C~~C~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~-~~~~~~l~~H~~  169 (247)
                      .|.+|.........|..|...-...   +||.|-.. ..+.+.|+.|.+
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~g---qCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCING---QCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTT---BCTTTCCBCCSSHHHHHHHHT
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCC---CCCcccCcCCcCHHHHHHHHH
Confidence            3555555555555566665554332   44444322 344455555543

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=86.34  E-value=0.73  Score=21.61  Aligned_cols=23  Identities=30%  Similarity=0.416  Sum_probs=17.7

Q ss_pred             ceecccccccccCHHHHHHHHHH
Q psy2288          36 SLACNICSMVFCDEIVLNKHVEE   58 (247)
Q Consensus        36 ~~~C~~C~~~~~~~~~l~~H~~~   58 (247)
                      .+.|+.|....++...+..|...
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e~   25 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVME   25 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHHH
Confidence            46788888888888888887654

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=86.17  E-value=0.44  Score=30.30  Aligned_cols=11  Identities=36%  Similarity=0.993  Sum_probs=6.0

Q ss_pred             Ceecccccccc
Q psy2288         204 PYSCSHCDKTF  214 (247)
Q Consensus       204 ~~~C~~C~~~f  214 (247)
                      ||+|..||..|
T Consensus        67 p~~C~~CG~~F   77 (105)
T 2gmg_A           67 PAQCRKCGFVF   77 (105)
T ss_dssp             CCBBTTTCCBC
T ss_pred             CcChhhCcCee
Confidence            45555555555

>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...

Probab=85.72  E-value=0.53  Score=27.64  Aligned_cols=12  Identities=25%  Similarity=0.827  Sum_probs=7.4

Q ss_pred             Ceeccccccccc
Q psy2288         204 PYSCSHCDKTFF  215 (247)
Q Consensus       204 ~~~C~~C~~~f~  215 (247)
                      .|.|..||..|.
T Consensus        28 ~Y~C~~CG~~~e   39 (70)
T 1twf_L           28 KYICAECSSKLS   39 (70)
T ss_dssp             CEECSSSCCEEC
T ss_pred             EEECCCCCCcce
Confidence            466666666654

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=85.16  E-value=0.18  Score=26.62  Aligned_cols=12  Identities=58%  Similarity=1.099  Sum_probs=5.7

Q ss_pred             cccCcCchhccc
Q psy2288         177 FRCEYCDKTFTR  188 (247)
Q Consensus       177 ~~C~~C~~~f~~  188 (247)
                      |.|-.||+.|+.
T Consensus         4 Y~C~rCg~~fs~   15 (48)
T 4ayb_P            4 YRCGKCWKTFTD   15 (48)
T ss_dssp             -CCCCTTTTCCC
T ss_pred             EEeeccCCCccH
Confidence            455555555543

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=84.74  E-value=1.7  Score=21.56  Aligned_cols=18  Identities=28%  Similarity=0.534  Sum_probs=7.3

Q ss_pred             ccCcCchhcccHHHHHHH
Q psy2288         178 RCEYCDKTFTRQIIMKEH  195 (247)
Q Consensus       178 ~C~~C~~~f~~~~~l~~H  195 (247)
                      .|..|+.+|.+...+..|
T Consensus        10 ~C~~C~IsF~~l~ty~aH   27 (36)
T 1fu9_A           10 YCSTCDISFNYVKTYLAH   27 (36)
T ss_dssp             EETTTTEECSSHHHHHHH
T ss_pred             eeccccceehhhHHHhhh
Confidence            344444444444444444

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=83.43  E-value=1.1  Score=21.47  Aligned_cols=25  Identities=24%  Similarity=0.510  Sum_probs=21.2

Q ss_pred             eecccccccccCHHHHHHHHHHhCC
Q psy2288          37 LACNICSMVFCDEIVLNKHVEEHST   61 (247)
Q Consensus        37 ~~C~~C~~~~~~~~~l~~H~~~~~~   61 (247)
                      -.|.+|.+.|.+-..|..|++..+.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3599999999999999999987654

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=83.42  E-value=0.47  Score=29.06  Aligned_cols=23  Identities=30%  Similarity=0.642  Sum_probs=11.2

Q ss_pred             eecccccccccChHHHHHHHHhccCC
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      ..|-+||+.|.   .|.+|+.++++.
T Consensus        22 iiClecGK~fK---~LkRHL~~~hgl   44 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHHSM   44 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTTCS
T ss_pred             eEecccchhhH---HHHHHHHHccCC
Confidence            45555555554   244555554443

>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}

Probab=82.78  E-value=0.97  Score=25.83  Aligned_cols=10  Identities=30%  Similarity=0.886  Sum_probs=4.8

Q ss_pred             eecccccccc
Q psy2288         205 YSCSHCDKTF  214 (247)
Q Consensus       205 ~~C~~C~~~f  214 (247)
                      |.|..||..+
T Consensus        22 Y~C~~Cg~~~   31 (63)
T 3h0g_L           22 YLCADCGARN   31 (63)
T ss_dssp             CBCSSSCCBC
T ss_pred             EECCCCCCee
Confidence            4444444444

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=81.73  E-value=0.82  Score=29.05  Aligned_cols=12  Identities=50%  Similarity=1.356  Sum_probs=6.4

Q ss_pred             CCeecCcCcccc
Q psy2288         119 KPHICKQCGHAF  130 (247)
Q Consensus       119 ~~~~C~~C~~~f  130 (247)
                      .|+.|..||..|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            345555555555

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=80.48  E-value=1.6  Score=28.71  Aligned_cols=28  Identities=14%  Similarity=0.324  Sum_probs=23.8

Q ss_pred             CCceecccccccccCHHHHHHHHHHhCC
Q psy2288          34 QKSLACNICSMVFCDEIVLNKHVEEHST   61 (247)
Q Consensus        34 ~~~~~C~~C~~~~~~~~~l~~H~~~~~~   61 (247)
                      +.+..|-+|...|.+...+..|++..|+
T Consensus        13 ~~~~~CLFCd~~~~s~~~~l~H~k~~H~   40 (121)
T 1wir_A           13 RQHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             CCceeEecCCCcccCHHHHHHHHHHhcC
Confidence            4568899999999999999999998765

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=80.17  E-value=0.9  Score=27.17  Aligned_cols=40  Identities=25%  Similarity=0.688  Sum_probs=25.2

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccC
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFD  216 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  216 (247)
                      .|.|..|+..+. +..|..|...-.+...|.|-.|++.|..
T Consensus        10 ~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~   49 (79)
T 1wjv_A           10 FFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG   49 (79)
T ss_dssp             EEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG
T ss_pred             EEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC
Confidence            466777775443 4456777665555456777777777764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	247
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-09
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	8e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-09
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	7e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.001
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.002
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	8e-09
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	5e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-09
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-08
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	5e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.003
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	1e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	1e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	3e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	7e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	3e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.001
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.004

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.3 bits (118), Expect = 2e-09
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGV 118
            +R  TG KPF+C  C +SFS+   L+ H   H  V
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.8 bits (88), Expect = 3e-05
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 111 HLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
                 G+KP  C  C  +F++   L LH  RH
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.6 bits (85), Expect = 8e-05
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV 202
             R   G+KPF+C  CD++F+R   +  H  RH  V
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (118), Expect = 3e-09
 Identities = 18/32 (56%), Positives = 22/32 (68%)

Query: 86  IHTGEKPFRCSVCGKSFSQRGILSSHLAVHAG 117
           IH+GEKP+ C  CGK+FS+  IL  H  VH G
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 2e-06
 Identities = 13/30 (43%), Positives = 20/30 (66%)

Query: 114 VHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
           +H+G KP+ C +CG AF++ S L  H+  H
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 7e-04
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGE 90
          + C  C K F+    L  H R+HTGE
Sbjct: 8  YGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.001
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG 201
           H G KP+ C  C K F+R  I+ +H   H G
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (75), Expect = 0.002
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
           H G +PY C  C K F  +  L +H+  H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (115), Expect = 8e-09
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 90  EKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
           +K + C  CGKSF+ +     H+++H G++P+ C  CG  F  K  L  H   H
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 1e-08
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 119 KPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSH 171
           K + C QCG +FT KSQ   H   H  +R + C VC  KF  K  L  H + H
Sbjct: 2   KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 5e-06
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 175 KPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
           K + C+ C K+FT +     H++ H G++PY C  C K F     L  H   H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 6e-05
 Identities = 16/46 (34%), Positives = 23/46 (50%)

Query: 70  CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVH 115
           C K F +      H  +H G +P+ C VCGK F  +  L  H+ +H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 1e-04
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 147 RHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRH 199
           + + C  C   FT KS   RH   H G++P+ C  C K F  +  +  H+  H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (115), Expect = 8e-09
 Identities = 15/33 (45%), Positives = 20/33 (60%)

Query: 85  RIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAG 117
           R HTGEKP+ CS C K+F Q+ +L  H   +  
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 7e-06
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 114 VHAGVKPHICKQCGHAFTQKSQLRLHEMRHGN 145
            H G KP+ C  C   F QK  L +H  R+ +
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 7e-04
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG 201
           R+H G KP+ C +CDKTF ++ ++  H  R+  
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.003
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 143 HGNIRHFACNVCPFKFTTKSDLQRHQRSH 171
           H   + +AC+ C   F  K  L  H + +
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (111), Expect = 3e-08
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 85  RIHTGEKPFRCSVCGKSFSQRGILSSHLAVH 115
           R H+GEKP+ C +C   F+Q G +  H+   
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (100), Expect = 9e-07
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 114 VHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
            H+G KP+ C  C   FTQ   +++H ++ 
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 8e-05
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRH 199
           R+H G KP+ C  C   FT+   MK H+ + 
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSHKT 229
           H G +PY C  C   F  + ++  H L   T
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHT 33

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (106), Expect = 1e-07
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 88  TGEKPFRCSVCGKSFSQRGILSSHL-AVHAGVKPHICK 124
           +  KP+ C  CGK FS+   L+ H+  VH   +PH C+
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (96), Expect = 3e-06
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 65 FTCTVCKKVFNNIKSLKTHSR-IHTGEKPFRCSV 97
          + C  C K F+    L  H + +HT E+P +C V
Sbjct: 6  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 5e-05
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 119 KPHICKQCGHAFTQKSQLRLHEMR-HGNIRHFACNV 153
           KP+IC+ CG  F++   L  H  + H + R   C V
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 1e-04
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 175 KPFRCEYCDKTFTRQIIMKEHLNR-HKGVQPYSC 207
           KP+ C+ C K F+R   +  H+ + H   +P+ C
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (104), Expect = 2e-07
 Identities = 12/35 (34%), Positives = 15/35 (42%)

Query: 83  HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAG 117
                   + ++C  CGKSFS    LS H   H G
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 3e-05
 Identities = 8/33 (24%), Positives = 13/33 (39%)

Query: 111 HLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
                   + + C +CG +F+  S L  H   H
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (83), Expect = 2e-04
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG 201
           R +      + ++C+ C K+F+    + +H   H G
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 139 HEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEG 173
            E +    R + C+ C   F+  SDL +H+R+H G
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (96), Expect = 3e-06
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 87  HTGEKPFRCSVCGKSFSQRGILSSHLAVH 115
            +G++PF C +C  +F+ +   + HL VH
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 3e-04
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 115 HAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
            +G +P +C+ C  AFT K+    H   H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 11/28 (39%), Positives = 20/28 (71%)

Query: 90  EKPFRCSVCGKSFSQRGILSSHLAVHAG 117
           +KPF+C +C ++FS+   L++H+  H G
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.3 bits (82), Expect = 2e-04
 Identities = 8/25 (32%), Positives = 11/25 (44%)

Query: 119 KPHICKQCGHAFTQKSQLRLHEMRH 143
           KP  C+ C   F++   L  H   H
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTH 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.8 bits (73), Expect = 0.003
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTG 89
          F C +C + F+    L TH R HTG
Sbjct: 4  FQCRICMRNFSRSDHLTTHIRTHTG 28

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 1e-05
 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 2/35 (5%)

Query: 149 FACN--VCPFKFTTKSDLQRHQRSHEGVKPFRCEY 181
           F+C    C   F  K  L+ H + H   + + CE+
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (91), Expect = 1e-05
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 65 FTCT--VCKKVFNNIKSLKTHSRIHTGEKPFRC 95
          F+C    C K FN  K LK H ++H+  + + C
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (81), Expect = 3e-04
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 93  FRCS--VCGKSFSQRGILSSHLAVHAGVKPHICK 124
           F C    CGKSF+ +  L  H+ +H+  + +IC+
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 37.6 bits (88), Expect = 4e-05
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 91  KPFRCSVCGKSFSQRGILSSHLAVHAGVK 119
           + F C VC ++F+++  L  H   H   K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 36.1 bits (84), Expect = 1e-04
 Identities = 13/27 (48%), Positives = 15/27 (55%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEK 91
          F C VC + F   + LK H R HT EK
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.3 bits (82), Expect = 2e-04
 Identities = 7/25 (28%), Positives = 13/25 (52%)

Query: 119 KPHICKQCGHAFTQKSQLRLHEMRH 143
           +  +C+ C  AF ++  L+ H   H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.1 bits (79), Expect = 7e-04
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 147 RHFACNVCPFKFTTKSDLQRHQRSHEGVK 175
           R F C VC   F  +  L+RH RSH   K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 91  KPFRCSVCGKSFSQRGILSSHLAVHAGVK 119
           K F C  C K F +   LS H+  H   K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 4e-04
 Identities = 9/27 (33%), Positives = 11/27 (40%)

Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEK 91
          F C  C K F     L  H + H  +K
Sbjct: 3  FACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.001
 Identities = 7/25 (28%), Positives = 9/25 (36%)

Query: 119 KPHICKQCGHAFTQKSQLRLHEMRH 143
           K   C +C   F +   L  H   H
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTH 25

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.001
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 149 FACNVCPFKFTTKSDLQRHQRSHEGVK 175
           FAC  CP +F     L +H ++H+  K
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (81), Expect = 3e-04
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 119 KPHICKQCGHAFTQKSQLRLHEMRH 143
           KP+ C +CG AF+Q S L  H+  H
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIH 25

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.3 bits (77), Expect = 0.001
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 91  KPFRCSVCGKSFSQRGILSSHLAVH 115
           KP++C  CGK+FSQ   L +H  +H
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIH 25

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.3 bits (81), Expect = 4e-04
 Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 78  KSLKTHSRIHTGEKPFRCSVC--GKSFSQRGILSSHLAVHAGVK 119
           +           +K F C      K+F +R  + SH+  H   +
Sbjct: 4   RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.002
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 91  KPFRCSV--CGKSFSQRGILSSHLAVHAGVK 119
           +PF C+   CGK F++   L  H   H G K
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (73), Expect = 0.004
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 91  KPFRCSV--CGKSFSQRGILSSHLAVHAG 117
           KP +C+   C KS+S+   L +HL  H G
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	247
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.71
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.63
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.32
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.31
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.31
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.28
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.27
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.27
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.24
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.23
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.23
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.2
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.15
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.12
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.11
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.09
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.08
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.06
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.05
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.05
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.04
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.02
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.01
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.96
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.94
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.94
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.88
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.84
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.81
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.81
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.81
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.77
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.72
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.71
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.61
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.56
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.51
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.48
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.48
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.43
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.35
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.35
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.32
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.32
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.29
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.22
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.17
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.13
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.12
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.08
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.04
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.03
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.01
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.95
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.93
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.76
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.69
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.68
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.64
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.6
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.57
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.55
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.51
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.51
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.5
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.49
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.44
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.37
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.37
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.36
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.34
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.33
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.32
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.28
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.24
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.23
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.22
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.21
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.1
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.88
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.83
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.8
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.73
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.62
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.61
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.57
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.56
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.53
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.52
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.5
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.4
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.29
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.0
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.67
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.47
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.47
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	95.25
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.24
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	94.98
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.91
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.78
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.48
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.34
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.29
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.19
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.02
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	92.24
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.22
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.21
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.09
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.65
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	91.09
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.08
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	90.98
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	90.93
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.86
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.28
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	89.09
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	88.26
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	86.88
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	85.64
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	84.9
d1zina2	35	Microbial and mitochondrial ADK, insert "zinc fing	82.92
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	81.97
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	81.68
d1s3ga2	35	Microbial and mitochondrial ADK, insert "zinc fing	81.42
d1wira_	121	Protein arginine N-methyltransferase 3 {Mouse (Mus	80.31
d1e4va2	35	Microbial and mitochondrial ADK, insert "zinc fing	80.13

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3.3e-18  Score=96.80  Aligned_cols=53  Identities=34%  Similarity=0.691  Sum_probs=47.1

Q ss_pred             CCCcccCcCchhcccHHHHHHHHHhcCCCCCeecccccccccChHHHHHHHHhc
Q psy2288         174 VKPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       174 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      ++||.|. ||++|.....|..|+++|+|++||+|.+||+.|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5789994 9999999999999999999999999999999999999999998876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.1e-16  Score=90.47  Aligned_cols=53  Identities=32%  Similarity=0.679  Sum_probs=42.7

Q ss_pred             CCccccCCCccccCChHHHHHHHHHhCCCCCcccCcCchhcccHHHHHHHHHhc
Q psy2288         146 IRHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRH  199 (247)
Q Consensus       146 ~~~~~C~~C~~~~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  199 (247)
                      ++||.| .||+.|.....|..|+++|.+++||.|+.|+++|.+.+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            467888 48888888888888888888888888888888888888888888765

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=5.6e-13  Score=68.36  Aligned_cols=35  Identities=31%  Similarity=0.723  Sum_probs=16.6

Q ss_pred             CCCcccCcCchhcccHHHHHHHHH-hcCCCCCeecc
Q psy2288         174 VKPFRCEYCDKTFTRQIIMKEHLN-RHKGVQPYSCS  208 (247)
Q Consensus       174 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  208 (247)
                      ++||.|..||++|.....|..|++ +|+|++||+|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            344444444444444444444443 34444444443

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=1.8e-13  Score=70.46  Aligned_cols=36  Identities=25%  Similarity=0.565  Sum_probs=25.2

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhccCC
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      |+++|++++||+|++||++|...++|..|+++|++|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            566677777777777777777777777777777664

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=6.9e-13  Score=65.29  Aligned_cols=33  Identities=33%  Similarity=0.689  Sum_probs=22.5

Q ss_pred             hcCCCCCeecccccccccChHHHHHHHHhccCC
Q psy2288         198 RHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       198 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      +|+|++||+|.+||++|...++|..|+++|.+|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            366677777777777777777777777776654

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.1e-12  Score=66.41  Aligned_cols=34  Identities=44%  Similarity=0.778  Sum_probs=25.2

Q ss_pred             HhcCCCCCeecccccccccChHHHHHHHHhccCC
Q psy2288         197 NRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       197 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      ++|+|++||+|.+||++|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4677777777777777777777777777777654

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.8e-12  Score=66.45  Aligned_cols=37  Identities=27%  Similarity=0.450  Sum_probs=34.0

Q ss_pred             CCCCeecccccccccChHHHHHHHH-hccCCCCCCCcc
Q psy2288         201 GVQPYSCSHCDKTFFDAQSLNKHKL-SHKTSADPISSA  237 (247)
Q Consensus       201 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~c~~  237 (247)
                      -++||+|.+||+.|...+.|.+|++ +|.+++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3689999999999999999999986 699999999974

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.27  E-value=5.8e-13  Score=67.99  Aligned_cols=34  Identities=26%  Similarity=0.714  Sum_probs=26.7

Q ss_pred             HHHhcCCCCCeecccccccccChHHHHHHHHhcc
Q psy2288         195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       195 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  228 (247)
                      |.++|+|++||+|++|++.|.+.+.|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            5567888888888888888888888888887774

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=5.1e-13  Score=68.68  Aligned_cols=37  Identities=22%  Similarity=0.573  Sum_probs=31.5

Q ss_pred             HHHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       166 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +|+.+|.+++||.|+.||++|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3667788888999999999999999999998888885

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.9e-12  Score=63.05  Aligned_cols=33  Identities=39%  Similarity=0.790  Sum_probs=28.6

Q ss_pred             HhCCCCCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         170 SHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       170 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +|++++||+|..|+++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            478888999999999999999999999988875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.6e-12  Score=64.88  Aligned_cols=34  Identities=29%  Similarity=0.669  Sum_probs=26.6

Q ss_pred             HhcCCCCCeecccccccccChHHHHHHHHhccCC
Q psy2288         197 NRHKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       197 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      ++|+|++||+|++|++.|++.++|..|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4678888888888888888888888887666554

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=5.7e-12  Score=62.83  Aligned_cols=32  Identities=22%  Similarity=0.518  Sum_probs=22.7

Q ss_pred             cCCCCCeecccccccccChHHHHHHHHhccCC
Q psy2288         199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       199 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      |+|++||+|.+|++.|.+.+.|.+|+++|..+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            56777777777777777777777777777543

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.2e-11  Score=62.54  Aligned_cols=35  Identities=37%  Similarity=0.823  Sum_probs=29.6

Q ss_pred             HHhCCCCCcccCcCchhcccHHHHHHHHHhcCCCC
Q psy2288         169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGVQ  203 (247)
Q Consensus       169 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  203 (247)
                      ++|++++||+|..|+++|...+.|..|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            46888899999999999999999999998888753

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.12  E-value=2.1e-11  Score=58.19  Aligned_cols=27  Identities=26%  Similarity=0.653  Sum_probs=15.2

Q ss_pred             CeecccccccccChHHHHHHHHhccCC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      ||+|++||+.|.+.+.|.+|+++|++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            555555555555555555555555554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=2e-11  Score=57.49  Aligned_cols=28  Identities=25%  Similarity=0.622  Sum_probs=17.3

Q ss_pred             CCCeecccccccccChHHHHHHHHhccC
Q psy2288         202 VQPYSCSHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       202 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      |+||+|++|++.|.+.+.|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4566666666666666666666666643

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.09  E-value=3.1e-11  Score=57.53  Aligned_cols=29  Identities=34%  Similarity=0.754  Sum_probs=23.8

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcCCCC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHKGVQ  203 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  203 (247)
                      +||.|++|+++|...+.|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57888888888888888888888888874

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=1.5e-11  Score=62.60  Aligned_cols=35  Identities=37%  Similarity=0.749  Sum_probs=28.8

Q ss_pred             HHHHhCCCCCcccCcCchhcccHHHHHHHHHhcCC
Q psy2288         167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       167 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  201 (247)
                      |.++|++++||.|+.|+++|.+.+.|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            45678888888888888888888888888888754

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=5e-11  Score=59.34  Aligned_cols=32  Identities=31%  Similarity=0.635  Sum_probs=27.5

Q ss_pred             hCCCCCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       171 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      |+|++||+|.+|++.|.+...|.+|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            57888999999999999999999999888764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=3.4e-11  Score=56.66  Aligned_cols=28  Identities=36%  Similarity=0.863  Sum_probs=22.2

Q ss_pred             CCCcccCcCchhcccHHHHHHHHHhcCC
Q psy2288         174 VKPFRCEYCDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       174 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  201 (247)
                      ++||.|+.|+++|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5778888888888888888888888765

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=5.2e-11  Score=56.63  Aligned_cols=27  Identities=30%  Similarity=0.757  Sum_probs=15.0

Q ss_pred             CeecccccccccChHHHHHHHHhccCC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      ||.|++||+.|.+.+.|.+|+++|+++
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCc
Confidence            455555555555555555555555554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=5.3e-11  Score=56.60  Aligned_cols=29  Identities=31%  Similarity=0.662  Sum_probs=22.4

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcCCCC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHKGVQ  203 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  203 (247)
                      +||.|+.|+++|.+.+.|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57778888888888888888888887764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=6.1e-11  Score=59.55  Aligned_cols=27  Identities=33%  Similarity=0.735  Sum_probs=13.2

Q ss_pred             CchhcccHHHHHHHHHhcCCCCCeecc
Q psy2288         182 CDKTFTRQIIMKEHLNRHKGVQPYSCS  208 (247)
Q Consensus       182 C~~~f~~~~~l~~H~~~h~~~~~~~C~  208 (247)
                      |+++|.....|.+|+++|+|++||+|+
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeCC
Confidence            444444444444444444444444443

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=6.8e-11  Score=59.55  Aligned_cols=34  Identities=35%  Similarity=0.685  Sum_probs=27.3

Q ss_pred             HHhCCCCCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       169 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      ++|+|++||.|+.|+++|....+|..|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            3588888888888888888888888888665543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.96  E-value=2.4e-11  Score=65.18  Aligned_cols=39  Identities=18%  Similarity=0.387  Sum_probs=28.6

Q ss_pred             HHHHHHhcCCCCCeeccc--ccccccChHHHHHHHHhccCCC
Q psy2288         192 MKEHLNRHKGVQPYSCSH--CDKTFFDAQSLNKHKLSHKTSA  231 (247)
Q Consensus       192 l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  231 (247)
                      |..|+. |+|++||+|.+  |++.|...+.|..|+++|++++
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            344553 77788888866  8888888888888888887764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.9e-10  Score=57.00  Aligned_cols=33  Identities=30%  Similarity=0.538  Sum_probs=31.0

Q ss_pred             eeccc--ccccccChHHHHHHHHhccCCCCCCCcc
Q psy2288         205 YSCSH--CDKTFFDAQSLNKHKLSHKTSADPISSA  237 (247)
Q Consensus       205 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~c~~  237 (247)
                      |.|++  ||+.|.+...|.+|+++|.+++||.|..
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78977  9999999999999999999999999963

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2e-10  Score=52.53  Aligned_cols=25  Identities=36%  Similarity=0.788  Sum_probs=15.6

Q ss_pred             CCeecccccccccChHHHHHHHHhc
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      +||+|.+||+.|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            4566666666666666666666655

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=3.6e-10  Score=51.69  Aligned_cols=26  Identities=31%  Similarity=0.698  Sum_probs=18.9

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHK  200 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~  200 (247)
                      +||+|..||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            46777777777777777777777763

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=1e-09  Score=52.39  Aligned_cols=27  Identities=30%  Similarity=0.639  Sum_probs=14.5

Q ss_pred             Ceeccc--ccccccChHHHHHHHHhccCC
Q psy2288         204 PYSCSH--CDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       204 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      ||+|++  |++.|.+.+.|.+|+++|++|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            455544  555555555555555555543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.81  E-value=5.5e-11  Score=63.71  Aligned_cols=40  Identities=25%  Similarity=0.565  Sum_probs=28.7

Q ss_pred             HHHHHHHHhCCCCCcccCc--CchhcccHHHHHHHHHhcCCCC
Q psy2288         163 DLQRHQRSHEGVKPFRCEY--CDKTFTRQIIMKEHLNRHKGVQ  203 (247)
Q Consensus       163 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  203 (247)
                      .|..|+. |.+++||.|.+  |++.|...+.|..|+++|+|++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3444553 77778888866  8888888888888888887764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.5e-09  Score=51.82  Aligned_cols=28  Identities=39%  Similarity=0.914  Sum_probs=22.8

Q ss_pred             CCcccCc--CchhcccHHHHHHHHHhcCCC
Q psy2288         175 KPFRCEY--CDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       175 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +||.|+.  |+++|...+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788877  888888888888888888875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.2e-09  Score=52.20  Aligned_cols=28  Identities=29%  Similarity=0.599  Sum_probs=16.2

Q ss_pred             CCeeccc--ccccccChHHHHHHHHhccCC
Q psy2288         203 QPYSCSH--CDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       203 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      +||+|++  ||+.|.+.+.|.+|+++|++|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            3556654  666666666666666665543

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.5e-09  Score=51.90  Aligned_cols=28  Identities=36%  Similarity=0.912  Sum_probs=22.9

Q ss_pred             CCcccCc--CchhcccHHHHHHHHHhcCCC
Q psy2288         175 KPFRCEY--CDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       175 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +||.|+.  |+++|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5788866  888888888888888888875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=3.8e-09  Score=50.90  Aligned_cols=27  Identities=33%  Similarity=0.796  Sum_probs=13.7

Q ss_pred             Ceecc--cccccccChHHHHHHHHhccCC
Q psy2288         204 PYSCS--HCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       204 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      ||+|+  .||+.|.+.+.|.+|+++|+++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            45553  2555555555555555555444

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=4.8e-09  Score=50.55  Aligned_cols=29  Identities=41%  Similarity=0.899  Sum_probs=23.4

Q ss_pred             CCcccC--cCchhcccHHHHHHHHHhcCCCC
Q psy2288         175 KPFRCE--YCDKTFTRQIIMKEHLNRHKGVQ  203 (247)
Q Consensus       175 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  203 (247)
                      +||.|+  .|+++|...+.|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            578885  58888888888888888888874

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.61  E-value=1.5e-08  Score=49.03  Aligned_cols=28  Identities=50%  Similarity=0.987  Sum_probs=18.1

Q ss_pred             CCCeeccc--ccccccChHHHHHHHHhccC
Q psy2288         202 VQPYSCSH--CDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       202 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  229 (247)
                      ++||.|++  |++.|++...|.+|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            45666655  66666666666666666654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=1.2e-08  Score=48.05  Aligned_cols=26  Identities=35%  Similarity=0.834  Sum_probs=15.6

Q ss_pred             CCeeccc--ccccccChHHHHHHHHhcc
Q psy2288         203 QPYSCSH--CDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       203 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  228 (247)
                      +||+|++  |++.|.+.+.|.+|+++|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            3566655  6666666666666666654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.51  E-value=1.5e-08  Score=47.72  Aligned_cols=27  Identities=33%  Similarity=0.924  Sum_probs=21.1

Q ss_pred             CCcccCc--CchhcccHHHHHHHHHhcCC
Q psy2288         175 KPFRCEY--CDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       175 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  201 (247)
                      +||.|++  |+++|.+.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5778866  88888888888888888765

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=3.5e-08  Score=42.59  Aligned_cols=26  Identities=31%  Similarity=0.595  Sum_probs=17.7

Q ss_pred             CeecccccccccChHHHHHHHHhccC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      |++|+.|++.|+++..|..|+++|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45677777777777777777776653

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.48  E-value=5e-08  Score=47.10  Aligned_cols=28  Identities=32%  Similarity=0.750  Sum_probs=19.7

Q ss_pred             CCCcccCc--CchhcccHHHHHHHHHhcCC
Q psy2288         174 VKPFRCEY--CDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       174 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  201 (247)
                      ++||.|+.  |+++|.....|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46777765  77777777777777777764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=2.7e-08  Score=46.29  Aligned_cols=25  Identities=40%  Similarity=0.967  Sum_probs=17.1

Q ss_pred             CCeeccc--ccccccChHHHHHHHHhc
Q psy2288         203 QPYSCSH--CDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       203 ~~~~C~~--C~~~f~~~~~l~~H~~~h  227 (247)
                      +||.|++  ||+.|.+..+|.+|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            4667765  777777777777777666

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.7e-07  Score=42.49  Aligned_cols=29  Identities=34%  Similarity=0.616  Sum_probs=20.9

Q ss_pred             CCCeecccccccccChHHHHHHHHhccCC
Q psy2288         202 VQPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       202 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      ++||.|++|++.|.++..+.-|+++|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            46777777777777777777777777553

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.6e-07  Score=41.58  Aligned_cols=27  Identities=26%  Similarity=0.525  Sum_probs=16.5

Q ss_pred             CCeecccccccccChHHHHHHHHhccC
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      +||+|..|.+.-.+.+.|..|+++|++
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            456666666666666666666666654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=1.8e-07  Score=43.39  Aligned_cols=30  Identities=40%  Similarity=0.635  Sum_probs=21.3

Q ss_pred             CeecccccccccChHHHHHHHHhccCCCCC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKTSADP  233 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  233 (247)
                      ...|.+||+.|...-.|.+|..+|.+++||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            456777777777777777777777777766

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=5.3e-08  Score=45.30  Aligned_cols=26  Identities=31%  Similarity=0.894  Sum_probs=15.7

Q ss_pred             CCcccCc--CchhcccHHHHHHHHHhcC
Q psy2288         175 KPFRCEY--CDKTFTRQIIMKEHLNRHK  200 (247)
Q Consensus       175 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  200 (247)
                      +||.|+.  |+++|....+|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            3566654  6666666666666666653

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=2.1e-07  Score=40.12  Aligned_cols=26  Identities=42%  Similarity=0.933  Sum_probs=20.7

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcCC
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~~  201 (247)
                      |.+|+.|++.|+.+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45788888888888888888888775

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=4.8e-07  Score=40.01  Aligned_cols=29  Identities=28%  Similarity=0.628  Sum_probs=25.3

Q ss_pred             CCCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         174 VKPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       174 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      ++||+|..|.+...+.++|..|+++|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            47899999999999999999999999874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=5.6e-07  Score=41.71  Aligned_cols=31  Identities=35%  Similarity=0.705  Sum_probs=22.8

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcCCCCCe
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHKGVQPY  205 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  205 (247)
                      +...|..||+.|.....|.+|..+|.|++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3456777777777777777777777777776

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=8.4e-07  Score=40.14  Aligned_cols=28  Identities=36%  Similarity=0.748  Sum_probs=21.3

Q ss_pred             CCCcccCcCchhcccHHHHHHHHHhcCC
Q psy2288         174 VKPFRCEYCDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       174 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  201 (247)
                      ++||+|++|+..|..+..+.-|.++|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4677788888778777777777777765

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.12  E-value=1.1e-06  Score=39.26  Aligned_cols=26  Identities=23%  Similarity=0.689  Sum_probs=18.7

Q ss_pred             CCCeecccccccccChHHHHHHHHhc
Q psy2288         202 VQPYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       202 ~~~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      ++||.|.+||+.|.+.....+|.+.|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            46777777777777777777777666

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.4e-06  Score=39.48  Aligned_cols=25  Identities=24%  Similarity=0.735  Sum_probs=12.9

Q ss_pred             CcccCc--CchhcccHHHHHHHHHhcC
Q psy2288         176 PFRCEY--CDKTFTRQIIMKEHLNRHK  200 (247)
Q Consensus       176 ~~~C~~--C~~~f~~~~~l~~H~~~h~  200 (247)
                      ||.|..  |++++...++|++|++.++
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            455543  5555555555555555444

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.04  E-value=1.8e-06  Score=38.50  Aligned_cols=26  Identities=38%  Similarity=0.772  Sum_probs=17.7

Q ss_pred             CCCcccCcCchhcccHHHHHHHHHhc
Q psy2288         174 VKPFRCEYCDKTFTRQIIMKEHLNRH  199 (247)
Q Consensus       174 ~~~~~C~~C~~~f~~~~~l~~H~~~h  199 (247)
                      ++||.|.+||+.|.......+|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            45677777777777776666776665

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=2.4e-06  Score=37.96  Aligned_cols=26  Identities=27%  Similarity=0.655  Sum_probs=18.2

Q ss_pred             cccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         177 FRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       177 ~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      |.|+.|+......+-|.+|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            56777777777777777777777665

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.8e-06  Score=37.94  Aligned_cols=25  Identities=32%  Similarity=0.792  Sum_probs=13.6

Q ss_pred             eecccccccccChHHHHHHHHhccC
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      +.|.+||+.|...+.|.+|...|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            3455555555555555555555544

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=3.6e-06  Score=38.10  Aligned_cols=27  Identities=37%  Similarity=0.730  Sum_probs=24.5

Q ss_pred             CCeeccc--ccccccChHHHHHHHHhccC
Q psy2288         203 QPYSCSH--CDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       203 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  229 (247)
                      +||.|.+  |++.+...++|..|++++|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5899977  99999999999999998765

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=3.2e-06  Score=37.14  Aligned_cols=26  Identities=31%  Similarity=0.544  Sum_probs=21.1

Q ss_pred             cccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         177 FRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       177 ~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      ..|..||++|...+.|.+|+.+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46888888888888888888888775

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=1.3e-05  Score=35.08  Aligned_cols=25  Identities=32%  Similarity=0.765  Sum_probs=13.4

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhc
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRH  199 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h  199 (247)
                      +||+|..|.+.....++|.+|+++|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            3455555555555555555555554

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.69  E-value=1.3e-05  Score=34.00  Aligned_cols=23  Identities=22%  Similarity=0.800  Sum_probs=11.6

Q ss_pred             cccCcCchhcccHHHHHHHHHhc
Q psy2288         177 FRCEYCDKTFTRQIIMKEHLNRH  199 (247)
Q Consensus       177 ~~C~~C~~~f~~~~~l~~H~~~h  199 (247)
                      |+|..|.++|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            34555555555555555555444

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=2.1e-05  Score=34.89  Aligned_cols=27  Identities=26%  Similarity=0.459  Sum_probs=25.4

Q ss_pred             eecccccccccChHHHHHHHHhccCCC
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLSHKTSA  231 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  231 (247)
                      |.|++||......+-|..|.++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            889999999999999999999999874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.64  E-value=1.5e-05  Score=33.86  Aligned_cols=24  Identities=33%  Similarity=0.945  Sum_probs=22.6

Q ss_pred             eecccccccccChHHHHHHHHhcc
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~h~  228 (247)
                      |+|..|..+|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999885

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=2.7e-05  Score=34.51  Aligned_cols=24  Identities=38%  Similarity=0.751  Sum_probs=15.4

Q ss_pred             CeecccccccccChHHHHHHHHhc
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      ||.|..|+..|.++.+|..||++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            466666666666666666666554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=4e-05  Score=33.45  Aligned_cols=27  Identities=48%  Similarity=0.827  Sum_probs=25.0

Q ss_pred             CCCeecccccccccChHHHHHHHHhcc
Q psy2288         202 VQPYSCSHCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       202 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  228 (247)
                      .+||+|..|.+.-...++|..|++.|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            379999999999999999999999984

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=4.5e-05  Score=33.71  Aligned_cols=28  Identities=36%  Similarity=0.636  Sum_probs=18.3

Q ss_pred             CCeecccccccccChHHHHHHHHhccCC
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      ..|.|..|...|.+...|..||-+|+++
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4466666766776666666666666653

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.51  E-value=4.3e-05  Score=32.94  Aligned_cols=25  Identities=32%  Similarity=0.683  Sum_probs=14.6

Q ss_pred             ccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         178 RCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       178 ~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +|+.|.+.|.++.-|..|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4555666666666666665555554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.51  E-value=5e-05  Score=37.03  Aligned_cols=29  Identities=34%  Similarity=0.715  Sum_probs=17.7

Q ss_pred             CCeecccccccccChHHHHHHHHhccCCC
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSHKTSA  231 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  231 (247)
                      +.|+|.+|++.|.+...|--|+..|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            34666666666666666666666664443

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.50  E-value=4.7e-05  Score=32.81  Aligned_cols=26  Identities=27%  Similarity=0.579  Sum_probs=24.4

Q ss_pred             ecccccccccChHHHHHHHHhccCCC
Q psy2288         206 SCSHCDKTFFDAQSLNKHKLSHKTSA  231 (247)
Q Consensus       206 ~C~~C~~~f~~~~~l~~H~~~h~~~~  231 (247)
                      +|+.|.+.|.++.-|..|-+.|++++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            79999999999999999999999875

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.49  E-value=5.2e-05  Score=36.96  Aligned_cols=29  Identities=24%  Similarity=0.480  Sum_probs=19.4

Q ss_pred             CCceecccccccccCHHHHHHHHHHhCCC
Q psy2288          34 QKSLACNICSMVFCDEIVLNKHVEEHSTL   62 (247)
Q Consensus        34 ~~~~~C~~C~~~~~~~~~l~~H~~~~~~~   62 (247)
                      .+.|+|.+|++.|.+..+|-.|++.|..+
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcch
Confidence            34567777777777777777777666543

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=4.5e-05  Score=33.94  Aligned_cols=23  Identities=22%  Similarity=0.678  Sum_probs=11.0

Q ss_pred             CcccCcCchhcccHHHHHHHHHh
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNR  198 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~  198 (247)
                      ||+|..|.......++|..|+++
T Consensus         2 py~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhhc
Confidence            44444444444444444444444

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.37  E-value=5.6e-05  Score=33.52  Aligned_cols=28  Identities=32%  Similarity=0.857  Sum_probs=20.7

Q ss_pred             CCeeccc--ccccccChHHHHHHHHhccCC
Q psy2288         203 QPYSCSH--CDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       203 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      +||.|.+  |.+.|.+...|.+|..+|+++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4677755  888888888888887777664

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=8.7e-05  Score=33.01  Aligned_cols=28  Identities=21%  Similarity=0.508  Sum_probs=25.2

Q ss_pred             CCeecccccccccChHHHHHHHHhccCC
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      +||+|.+|.......++|..|+++.|+.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            5899999999999999999999887654

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=8.3e-05  Score=35.92  Aligned_cols=28  Identities=29%  Similarity=0.679  Sum_probs=22.2

Q ss_pred             CCCCeec--ccccccccChHHHHHHHHhcc
Q psy2288         201 GVQPYSC--SHCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       201 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~  228 (247)
                      +++||.|  +.|+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4788888  558888888888888887774

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.34  E-value=7.9e-05  Score=32.87  Aligned_cols=17  Identities=35%  Similarity=0.579  Sum_probs=7.5

Q ss_pred             CchhcccHHHHHHHHHh
Q psy2288         182 CDKTFTRQIIMKEHLNR  198 (247)
Q Consensus       182 C~~~f~~~~~l~~H~~~  198 (247)
                      |++.|...+.|.+|.++
T Consensus        11 cdk~fs~ps~lkrhekv   27 (29)
T d2j7ja2          11 CDKRFSLPSRLKRHEKV   27 (29)
T ss_dssp             CCCEESSHHHHHHHHHH
T ss_pred             ccccccCHHHHhhhhhc
Confidence            44444444444444443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=9.5e-05  Score=32.83  Aligned_cols=26  Identities=23%  Similarity=0.529  Sum_probs=17.5

Q ss_pred             CCeecccccccccChHHHHHHHHhcc
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSHK  228 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h~  228 (247)
                      +||+|..|+....+.++|..|++.-|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHHc
Confidence            46777777777777777777765433

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=9.3e-05  Score=32.75  Aligned_cols=25  Identities=24%  Similarity=0.789  Sum_probs=19.8

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcC
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHK  200 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~  200 (247)
                      ||.|..|..+|.++.+|.+||++..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            5788888888888888888887643

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=0.00012  Score=35.85  Aligned_cols=23  Identities=30%  Similarity=0.817  Sum_probs=12.0

Q ss_pred             CCCcccCcCchhcccHHHHHHHH
Q psy2288         174 VKPFRCEYCDKTFTRQIIMKEHL  196 (247)
Q Consensus       174 ~~~~~C~~C~~~f~~~~~l~~H~  196 (247)
                      -+||+|..|++.|..+.++.+|.
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHhh
Confidence            44555555555555555555553

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=0.00015  Score=35.45  Aligned_cols=27  Identities=37%  Similarity=0.843  Sum_probs=24.4

Q ss_pred             CCCCCeecccccccccChHHHHHHHHh
Q psy2288         200 KGVQPYSCSHCDKTFFDAQSLNKHKLS  226 (247)
Q Consensus       200 ~~~~~~~C~~C~~~f~~~~~l~~H~~~  226 (247)
                      +|.+||.|.+|++.|.-..++.+|..+
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            478999999999999999999999754

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.23  E-value=0.00011  Score=31.08  Aligned_cols=22  Identities=36%  Similarity=0.996  Sum_probs=19.2

Q ss_pred             CeecccccccccChHHHHHHHH
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKL  225 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~  225 (247)
                      ||+|+-|++.|.++.+|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7899999999999999988874

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=5.6e-05  Score=34.42  Aligned_cols=26  Identities=42%  Similarity=0.924  Sum_probs=16.9

Q ss_pred             CCeeccc--ccccccChHHHHHHH-Hhcc
Q psy2288         203 QPYSCSH--CDKTFFDAQSLNKHK-LSHK  228 (247)
Q Consensus       203 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~  228 (247)
                      +||.|.+  |++.|++.++-..|+ ++|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            4666655  777777777776775 5554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.21  E-value=0.00018  Score=31.76  Aligned_cols=28  Identities=32%  Similarity=0.784  Sum_probs=21.4

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcCCC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      ..|.|..|...|..+..|+.|+-+|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4567888888888888888888887764

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.10  E-value=0.00023  Score=31.37  Aligned_cols=25  Identities=44%  Similarity=0.922  Sum_probs=22.8

Q ss_pred             CCeeccc--ccccccChHHHHHHHHhc
Q psy2288         203 QPYSCSH--CDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       203 ~~~~C~~--C~~~f~~~~~l~~H~~~h  227 (247)
                      .||+|+.  |++.|+..+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5899976  999999999999999887

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.0001  Score=33.55  Aligned_cols=27  Identities=33%  Similarity=0.692  Sum_probs=17.4

Q ss_pred             CCcccCc--CchhcccHHHHHHHH-HhcCC
Q psy2288         175 KPFRCEY--CDKTFTRQIIMKEHL-NRHKG  201 (247)
Q Consensus       175 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~~  201 (247)
                      +||.|..  |.++|++.+.-.+|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4666654  777777777777776 55543

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00065  Score=29.52  Aligned_cols=25  Identities=20%  Similarity=0.472  Sum_probs=19.6

Q ss_pred             ceecccccccccCHHHHHHHHHHhC
Q psy2288          36 SLACNICSMVFCDEIVLNKHVEEHS   60 (247)
Q Consensus        36 ~~~C~~C~~~~~~~~~l~~H~~~~~   60 (247)
                      .|+||.|+......++|..|++..+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            3678888888888888888887654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.80  E-value=0.00046  Score=31.34  Aligned_cols=23  Identities=30%  Similarity=0.775  Sum_probs=14.8

Q ss_pred             CeecccccccccChHHHHHHHHh
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLS  226 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~  226 (247)
                      ||.|.+|+..|++..-|-+|.+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            56666666666666666666543

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.73  E-value=0.00054  Score=30.33  Aligned_cols=27  Identities=26%  Similarity=0.827  Sum_probs=17.3

Q ss_pred             CCcccCcCchhcccHHHHHHHHHhcCC
Q psy2288         175 KPFRCEYCDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       175 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  201 (247)
                      +||+|..|.....+.++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            366677776666677777777655433

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.00094  Score=29.10  Aligned_cols=24  Identities=29%  Similarity=0.546  Sum_probs=17.0

Q ss_pred             CeecccccccccChHHHHHHHHhc
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      |-+|++|+++.++++.|..|.+.|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            456777777777777777777666

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.61  E-value=0.00091  Score=28.94  Aligned_cols=23  Identities=30%  Similarity=0.894  Sum_probs=18.1

Q ss_pred             CeecccccccccChHHHHHHHHh
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLS  226 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~  226 (247)
                      ||+|+.||+.+.++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            67888888888888888887644

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.57  E-value=0.001  Score=29.89  Aligned_cols=28  Identities=25%  Similarity=0.513  Sum_probs=22.6

Q ss_pred             CCeeccc--ccccccChHHHHHHHHhccCC
Q psy2288         203 QPYSCSH--CDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       203 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      +.|.|+.  |+..|+..+.|+.|+-.|++|
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4578854  899999999999998888775

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.56  E-value=0.00079  Score=30.54  Aligned_cols=26  Identities=35%  Similarity=0.976  Sum_probs=19.4

Q ss_pred             CcccCcCchhcccHHHHHHHHHh-cCC
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNR-HKG  201 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~-h~~  201 (247)
                      ||.|.+|++.|..+.-|.+|++. |.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            67888888888888888888754 443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.53  E-value=0.00085  Score=28.28  Aligned_cols=22  Identities=23%  Similarity=0.798  Sum_probs=19.7

Q ss_pred             CcccCcCchhcccHHHHHHHHH
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLN  197 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~  197 (247)
                      ||+|..|...|.++..|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7899999999999999999973

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.52  E-value=0.00052  Score=30.34  Aligned_cols=27  Identities=37%  Similarity=0.717  Sum_probs=16.8

Q ss_pred             CcccCc--CchhcccHHHHHHHHHhcCCC
Q psy2288         176 PFRCEY--CDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       176 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      ||.|..  |.+.|.+.-.|.+|..+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            455533  666666666666666666653

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.0011  Score=28.91  Aligned_cols=25  Identities=20%  Similarity=0.458  Sum_probs=20.1

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcC
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHK  200 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~  200 (247)
                      |-+|+.|.++.+++..|+.|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4578888888888888888888773

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.0012  Score=31.75  Aligned_cols=28  Identities=32%  Similarity=0.640  Sum_probs=22.6

Q ss_pred             CCCCccc--CcCchhcccHHHHHHHHHhcC
Q psy2288         173 GVKPFRC--EYCDKTFTRQIIMKEHLNRHK  200 (247)
Q Consensus       173 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~  200 (247)
                      .++||.|  +.|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            3688888  568888998888888887774

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0019  Score=28.02  Aligned_cols=22  Identities=27%  Similarity=0.641  Sum_probs=13.2

Q ss_pred             eecccccccccChHHHHHHHHh
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLS  226 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~  226 (247)
                      |+||.|+-...++++|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            5566666666666666666544

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.003  Score=29.25  Aligned_cols=26  Identities=27%  Similarity=0.603  Sum_probs=21.6

Q ss_pred             CeecccccccccChHHHHHHHHhccC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      .|.|..||+.|.+...+.+|...-.+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48899999999999999988877655

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.67  E-value=0.0039  Score=26.88  Aligned_cols=23  Identities=39%  Similarity=0.778  Sum_probs=19.2

Q ss_pred             CcccCcCchhcccHHHHHHHHHh
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNR  198 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~  198 (247)
                      ||+|+.||+.+-.+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68899999999999999888643

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.47  E-value=0.0031  Score=29.63  Aligned_cols=23  Identities=26%  Similarity=0.421  Sum_probs=16.2

Q ss_pred             CcCchhcccHHHHHHHHHhcCCC
Q psy2288         180 EYCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       180 ~~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      +.=++.|.....|..|+++|+||
T Consensus        11 ~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          11 SRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCcchhHHHHHHHHhhcCCC
Confidence            33345677788888888888775

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.47  E-value=0.0046  Score=31.24  Aligned_cols=24  Identities=38%  Similarity=0.736  Sum_probs=20.4

Q ss_pred             CeecccccccccChHHHHHHHHhc
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      .|.|..|++.|+....|..|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            478888999999998898888777

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.25  E-value=0.011  Score=29.65  Aligned_cols=29  Identities=21%  Similarity=0.384  Sum_probs=20.1

Q ss_pred             CCCCeecccccccccChHHHHHHHHhccC
Q psy2288         201 GVQPYSCSHCDKTFFDAQSLNKHKLSHKT  229 (247)
Q Consensus       201 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  229 (247)
                      .+.|..|++|+....+..+|.+|+..-|-
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf   49 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            35677777777777777777777755433

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.24  E-value=0.0084  Score=25.25  Aligned_cols=22  Identities=27%  Similarity=0.596  Sum_probs=16.0

Q ss_pred             eecccccccccChHHHHHHHHh
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLS  226 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~  226 (247)
                      |.|+.|-+.|.++.++..|.+.
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6677777777777777777654

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.98  E-value=0.0065  Score=33.39  Aligned_cols=36  Identities=17%  Similarity=0.357  Sum_probs=17.6

Q ss_pred             CeecccccccccChHHHHHHHHhccCCCCCCCccccCCC
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKL  242 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c~~~~  242 (247)
                      .|+||.|++.|+   .|..-.........+.|..|++.+
T Consensus        14 ~y~Cp~C~~~ys---~Lda~~L~d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_          14 SFKCPVCSSTFT---DLEANQLFDPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             EEECSSSCCEEE---HHHHHHHEETTTTEEBCSSSCCBC
T ss_pred             ceECCCCCCCcc---hhhHHHhcCcCCCeEEecCCCCEE
Confidence            355555555554   233333344444555555555544

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.91  E-value=0.011  Score=29.87  Aligned_cols=25  Identities=28%  Similarity=0.639  Sum_probs=17.4

Q ss_pred             ccccCCCccccCChHHHHHHHHHhC
Q psy2288         148 HFACNVCPFKFTTKSDLQRHQRSHE  172 (247)
Q Consensus       148 ~~~C~~C~~~~~~~~~l~~H~~~h~  172 (247)
                      .|.|..|++.|.....|++|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            3567777777777777777776653

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.78  E-value=0.011  Score=24.83  Aligned_cols=22  Identities=36%  Similarity=0.759  Sum_probs=17.5

Q ss_pred             cccCcCchhcccHHHHHHHHHh
Q psy2288         177 FRCEYCDKTFTRQIIMKEHLNR  198 (247)
Q Consensus       177 ~~C~~C~~~f~~~~~l~~H~~~  198 (247)
                      |.|+.|-+.|..+.++..|.+.
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788888888888888888765

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.48  E-value=0.027  Score=24.45  Aligned_cols=18  Identities=39%  Similarity=0.730  Sum_probs=13.1

Q ss_pred             ccccccChHHHHHHHHhc
Q psy2288         210 CDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       210 C~~~f~~~~~l~~H~~~h  227 (247)
                      |++.|.+.+.+..|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            777777777777777665

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.34  E-value=0.037  Score=25.46  Aligned_cols=26  Identities=42%  Similarity=0.782  Sum_probs=20.9

Q ss_pred             CcccCcCchhcccHHHHHHHHHhcCC
Q psy2288         176 PFRCEYCDKTFTRQIIMKEHLNRHKG  201 (247)
Q Consensus       176 ~~~C~~C~~~f~~~~~l~~H~~~h~~  201 (247)
                      .|.|..|++.|..+..+.+|...-.|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788889999888888888776554

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.29  E-value=0.058  Score=26.99  Aligned_cols=30  Identities=23%  Similarity=0.409  Sum_probs=22.6

Q ss_pred             CCceecccccccccCHHHHHHHHHHhCCCC
Q psy2288          34 QKSLACNICSMVFCDEIVLNKHVEEHSTLG   63 (247)
Q Consensus        34 ~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~   63 (247)
                      +.|-.|+.|+.+......|++|+...+-.+
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            567788888888888888888877665443

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.19  E-value=0.053  Score=24.67  Aligned_cols=21  Identities=24%  Similarity=0.634  Sum_probs=14.6

Q ss_pred             CeecccccccccChHHHHHHH
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHK  224 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~  224 (247)
                      .|.|+-||-.|++.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            367777777777777777664

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.02  E-value=0.03  Score=25.53  Aligned_cols=22  Identities=23%  Similarity=0.543  Sum_probs=18.0

Q ss_pred             ceecccccccccCHHHHHHHHH
Q psy2288          36 SLACNICSMVFCDEIVLNKHVE   57 (247)
Q Consensus        36 ~~~C~~C~~~~~~~~~l~~H~~   57 (247)
                      .+.|+.|+..|.+.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4788889988888888888854

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.24  E-value=0.035  Score=30.37  Aligned_cols=37  Identities=30%  Similarity=0.588  Sum_probs=20.3

Q ss_pred             CCceecccccccccCHHHHHHHHHHhCCCCceeccccccc
Q psy2288          34 QKSLACNICSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKV   73 (247)
Q Consensus        34 ~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~   73 (247)
                      ...|+||.|++.|.+...+..   .......|.|..|+..
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCCE
Confidence            445677777777755444432   2233345667666543

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.22  E-value=0.053  Score=24.17  Aligned_cols=22  Identities=23%  Similarity=0.649  Sum_probs=14.0

Q ss_pred             cCchhcccHHHHHHHHHhcCCC
Q psy2288         181 YCDKTFTRQIIMKEHLNRHKGV  202 (247)
Q Consensus       181 ~C~~~f~~~~~l~~H~~~h~~~  202 (247)
                      .|+-.|.....|..|+-.|+|+
T Consensus        10 dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1          10 DCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             GGCCEESSHHHHHHHHHHHHCC
T ss_pred             CcchhhccchhhhHHhhhhcCC
Confidence            3666666666666666666654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.21  E-value=0.057  Score=24.92  Aligned_cols=25  Identities=20%  Similarity=0.668  Sum_probs=16.7

Q ss_pred             CCCCeecccccccccChHHHHHHHH
Q psy2288         201 GVQPYSCSHCDKTFFDAQSLNKHKL  225 (247)
Q Consensus       201 ~~~~~~C~~C~~~f~~~~~l~~H~~  225 (247)
                      |+..|.|.+|.+.+..-+++.+|..
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyv   29 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYV   29 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHH
Confidence            4455777777777777777777743

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.09  E-value=0.13  Score=22.48  Aligned_cols=22  Identities=23%  Similarity=0.673  Sum_probs=10.3

Q ss_pred             eecCcCcccccChhHHHHHHHH
Q psy2288         121 HICKQCGHAFTQKSQLRLHEMR  142 (247)
Q Consensus       121 ~~C~~C~~~f~~~~~l~~h~~~  142 (247)
                      |.|..|++...+...+..|+..
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            3444444444444444444443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.65  E-value=0.047  Score=25.45  Aligned_cols=21  Identities=19%  Similarity=0.056  Sum_probs=17.9

Q ss_pred             ccccccChHHHHHHHHhccCC
Q psy2288         210 CDKTFFDAQSLNKHKLSHKTS  230 (247)
Q Consensus       210 C~~~f~~~~~l~~H~~~h~~~  230 (247)
                      =++.|.....|..|+++|++|
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            345799999999999999886

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.09  E-value=0.13  Score=22.41  Aligned_cols=22  Identities=23%  Similarity=0.708  Sum_probs=11.8

Q ss_pred             eecccccccccChHHHHHHHHh
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLS  226 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~  226 (247)
                      |.|..||+...+...+.-|+-.
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            4555555555555555555433

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.08  E-value=0.093  Score=28.31  Aligned_cols=25  Identities=32%  Similarity=0.700  Sum_probs=20.5

Q ss_pred             CCeecccccccccChHHHHHHHHhc
Q psy2288         203 QPYSCSHCDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       203 ~~~~C~~C~~~f~~~~~l~~H~~~h  227 (247)
                      ..|+|..|.-.|.+...|..|+..|
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~h   41 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIH   41 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhc
Confidence            4588888888888888888888777

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.98  E-value=0.098  Score=24.10  Aligned_cols=20  Identities=35%  Similarity=0.756  Sum_probs=8.4

Q ss_pred             cccCCCccccCChHHHHHHH
Q psy2288         149 FACNVCPFKFTTKSDLQRHQ  168 (247)
Q Consensus       149 ~~C~~C~~~~~~~~~l~~H~  168 (247)
                      |+|..|.+.+...+.+-+|.
T Consensus         9 yRC~~C~r~YTHISNFCRHy   28 (37)
T d2drpa1           9 YRCKVCSRVYTHISNFCRHY   28 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHH
T ss_pred             EEeehhhHHHHHHHHHHHHH
Confidence            34444444444444444443

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=90.93  E-value=0.062  Score=25.76  Aligned_cols=11  Identities=0%  Similarity=-0.499  Sum_probs=6.0

Q ss_pred             CCCCCCCcccc
Q psy2288         229 TSADPISSAKG  239 (247)
Q Consensus       229 ~~~~~~c~~c~  239 (247)
                      ++.|.+|+.|+
T Consensus        17 g~~Pe~CPvCg   27 (36)
T d1yuza2          17 GEDFEKCPICF   27 (36)
T ss_dssp             SSCCSBCTTTC
T ss_pred             CCCCCcCCCCC
Confidence            34555566654

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.86  E-value=0.093  Score=22.34  Aligned_cols=18  Identities=39%  Similarity=0.750  Sum_probs=10.2

Q ss_pred             ccccccChHHHHHHHHhc
Q psy2288         210 CDKTFFDAQSLNKHKLSH  227 (247)
Q Consensus       210 C~~~f~~~~~l~~H~~~h  227 (247)
                      |++.|..-..|..|+.+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            555555555555555554

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.28  E-value=0.043  Score=30.54  Aligned_cols=25  Identities=24%  Similarity=0.406  Sum_probs=18.5

Q ss_pred             CCceecccccccccCHHHHHHHHHH
Q psy2288          34 QKSLACNICSMVFCDEIVLNKHVEE   58 (247)
Q Consensus        34 ~~~~~C~~C~~~~~~~~~l~~H~~~   58 (247)
                      ...|-|..|++.|.+...|..|+++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            3447788888888888888877665

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.09  E-value=0.046  Score=30.41  Aligned_cols=23  Identities=30%  Similarity=0.554  Sum_probs=15.1

Q ss_pred             CeecccccccccChHHHHHHHHh
Q psy2288         204 PYSCSHCDKTFFDAQSLNKHKLS  226 (247)
Q Consensus       204 ~~~C~~C~~~f~~~~~l~~H~~~  226 (247)
                      .|-|..|++.|.+...|..|+++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            46666677777777666666644

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.26  E-value=0.11  Score=25.03  Aligned_cols=9  Identities=22%  Similarity=1.224  Sum_probs=3.9

Q ss_pred             cccCCCccc
Q psy2288         149 FACNVCPFK  157 (247)
Q Consensus       149 ~~C~~C~~~  157 (247)
                      |.|+.||..
T Consensus         6 ~~C~vCG~i   14 (37)
T d1nnqa2           6 YICPICGYT   14 (37)
T ss_dssp             EECTTTCCE
T ss_pred             EECCCCCCE
Confidence            444444433

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.88  E-value=0.32  Score=26.15  Aligned_cols=28  Identities=18%  Similarity=0.427  Sum_probs=22.0

Q ss_pred             CCceecccccccccCHHHHHHHHHHhCC
Q psy2288          34 QKSLACNICSMVFCDEIVLNKHVEEHST   61 (247)
Q Consensus        34 ~~~~~C~~C~~~~~~~~~l~~H~~~~~~   61 (247)
                      ...|+|..|+..|-+...|..|+..|.+
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccH
Confidence            4568888888888888888888877754

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=85.64  E-value=0.14  Score=24.62  Aligned_cols=31  Identities=10%  Similarity=0.136  Sum_probs=18.8

Q ss_pred             eecccccccccChHHHHHHHHhccCCCCCCCccccCCCc
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF  243 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c~~~~~  243 (247)
                      +.|+.||..|        |+...-...+-.|..||+.|.
T Consensus         3 ~vc~~cG~~Y--------h~~~~pPk~~g~CD~cg~~L~   33 (37)
T d2ak3a2           3 WIHPGSGRVY--------NIEFNPPKTMGIDDLTGEPLV   33 (37)
T ss_dssp             EEETTTTEEE--------ETTTBCCSSTTBCTTTCCBCB
T ss_pred             eeeCCcCChh--------hhccCCccccCCccCCCCcCE
Confidence            4566677666        344455556666777766654

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.90  E-value=0.39  Score=20.76  Aligned_cols=21  Identities=24%  Similarity=0.426  Sum_probs=16.6

Q ss_pred             ccccccccCHHHHHHHHHHhC
Q psy2288          40 NICSMVFCDEIVLNKHVEEHS   60 (247)
Q Consensus        40 ~~C~~~~~~~~~l~~H~~~~~   60 (247)
                      +-|++.|.+...|..|.+-.+
T Consensus         6 ~gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHGG
T ss_pred             CCchhhhccHHHHHhHHHHHH
Confidence            358999999999988877644

>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus stearothermophilus [TaxId: 1422]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.92  E-value=0.17  Score=24.02  Aligned_cols=31  Identities=23%  Similarity=0.574  Sum_probs=19.9

Q ss_pred             eecccccccccChHHHHHHHHhccCCCCCCCccccCCCc
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF  243 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c~~~~~  243 (247)
                      +.|+.||..|        |....-...+-.|..||+.++
T Consensus         3 r~C~~CG~~Y--------h~~~~pPk~~g~CD~cG~~L~   33 (35)
T d1zina2           3 RICRNCGATY--------HLIFHPPAKPGVCDKCGGELY   33 (35)
T ss_dssp             EEETTTCCEE--------ETTTBCCSSTTBCTTTCCBEE
T ss_pred             cCCcCcCchh--------ccccCCCCCCCcCCCCCCCcc
Confidence            5677777776        334445556667777777664

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.68  E-value=0.75  Score=21.21  Aligned_cols=25  Identities=20%  Similarity=0.513  Sum_probs=20.1

Q ss_pred             CCceecccccccccCHHHHHHHHHH
Q psy2288          34 QKSLACNICSMVFCDEIVLNKHVEE   58 (247)
Q Consensus        34 ~~~~~C~~C~~~~~~~~~l~~H~~~   58 (247)
                      .+.|.|..|-+-+.+...+.+|+..
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHHh
Confidence            3568888888888888888888764

>d1s3ga2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus globisporus [TaxId: 1459]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Bacillus globisporus [TaxId: 1459]

Probab=81.42  E-value=0.22  Score=23.64  Aligned_cols=31  Identities=16%  Similarity=0.445  Sum_probs=20.0

Q ss_pred             eecccccccccChHHHHHHHHhccCCCCCCCccccCCCc
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF  243 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c~~~~~  243 (247)
                      +.|+.||..|.        ....-...+-.|..|++.++
T Consensus         3 ~~C~~CG~~Yh--------~~~~pPk~~g~CD~cg~~L~   33 (35)
T d1s3ga2           3 RICKVCGTSYH--------LLFNPPQVEGKCDKDGGELY   33 (35)
T ss_dssp             EEETTTCCEEE--------TTTBCCSBTTBCTTTCCBEE
T ss_pred             cCCcCcCchhc--------cccCCCCCCCccCCCCCCce
Confidence            46777777773        33444556667777777665

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.31  E-value=0.76  Score=28.67  Aligned_cols=28  Identities=14%  Similarity=0.324  Sum_probs=23.0

Q ss_pred             CCceecccccccccCHHHHHHHHHHhCC
Q psy2288          34 QKSLACNICSMVFCDEIVLNKHVEEHST   61 (247)
Q Consensus        34 ~~~~~C~~C~~~~~~~~~l~~H~~~~~~   61 (247)
                      +.+..|.+|...|.+...+..|++..|+
T Consensus        13 ~~~~~CLFCd~~f~s~~~~l~H~k~~H~   40 (121)
T d1wira_          13 RQHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             cccceecccCCccCCHHHHHHHHHHhhC
Confidence            4567889999999888888889888765

>d1e4va2 g.41.2.1 (A:122-156) Microbial and mitochondrial ADK, insert "zinc finger" domain {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Escherichia coli [TaxId: 562]

Probab=80.13  E-value=0.32  Score=23.00  Aligned_cols=31  Identities=10%  Similarity=0.155  Sum_probs=19.9

Q ss_pred             eecccccccccChHHHHHHHHhccCCCCCCCccccCCCc
Q psy2288         205 YSCSHCDKTFFDAQSLNKHKLSHKTSADPISSAKGSKLF  243 (247)
Q Consensus       205 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~c~~c~~~~~  243 (247)
                      ..|+.||..|        |+...-....-.|..||+.++
T Consensus         3 r~c~~cG~~Y--------h~~~~PPk~~g~CD~cg~~L~   33 (35)
T d1e4va2           3 RVHAPSGRVY--------HVKFNPPKVEGKDDVTGEELT   33 (35)
T ss_dssp             EEETTTTEEE--------ETTTBCCSSTTBCTTTCCBCB
T ss_pred             cCCcCcCChh--------hhccCccccCCcccCCCCEee
Confidence            4577777776        444455556667777777665