Psyllid ID: psy2308


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------5
MNILGMIFSMCGLMMRLKWCAWAALYCACISFANSRVSDDGKQLLSSFM
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHcc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcc
MNILGMIFSMCGLMMRLKWCAWAALYCACISfansrvsddgKQLLSSFM
MNILGMIFSMCGLMMRLKWCAWAALYCACISFANSRVSDDGKQLLSSFM
MNILGMIFSMCGLMMRLKWCAWAALYCACISFANSRVSDDGKQLLSSFM
**ILGMIFSMCGLMMRLKWCAWAALYCACISFAN***************
*NILGMIFSMCGLMMRLKWCAWAALYCACISFANSR***DGKQLLSSFM
MNILGMIFSMCGLMMRLKWCAWAALYCACISFANSRVSDDGKQLLSSFM
MNILGMIFSMCGLMMRLKWCAWAALYCACISFANS**************
ooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooo
oooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
oooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MNILGMIFSMCGLMMRLKWCAWAALYCACISFANSRVSDDGKQLLSSFM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query49 2.2.26 [Sep-21-2011]
Q9U516108 Protein Asterix OS=Manduc N/A N/A 1.0 0.453 0.816 7e-19
Q9VRJ8108 Protein Asterix OS=Drosop yes N/A 1.0 0.453 0.857 2e-18
Q09993113 Protein Asterix OS=Caenor yes N/A 1.0 0.433 0.755 2e-17
Q6Q7K0106 Protein Asterix OS=Sus sc yes N/A 1.0 0.462 0.755 1e-16
Q6ZWX0106 Protein Asterix OS=Mus mu yes N/A 1.0 0.462 0.755 1e-16
Q9Y284106 Protein Asterix OS=Homo s yes N/A 1.0 0.462 0.755 1e-16
Q2M2T6106 Protein Asterix OS=Bos ta yes N/A 1.0 0.462 0.755 2e-16
F8RT80101 Protein Asterix OS=Gallus yes N/A 1.0 0.485 0.734 2e-16
>sp|Q9U516|ASTER_MANSE Protein Asterix OS=Manduca sexta PE=3 SV=1 Back     alignment and function desciption
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 40/49 (81%), Positives = 46/49 (93%)

Query: 1  MNILGMIFSMCGLMMRLKWCAWAALYCACISFANSRVSDDGKQLLSSFM 49
          MNILGM+FSMCGLMMRLKWCAW A++C+ ISFANSRVSDD KQ++SSFM
Sbjct: 34 MNILGMVFSMCGLMMRLKWCAWTAVFCSSISFANSRVSDDTKQIVSSFM 82





Manduca sexta (taxid: 7130)
>sp|Q9VRJ8|ASTER_DROME Protein Asterix OS=Drosophila melanogaster GN=CG10674 PE=1 SV=1 Back     alignment and function description
>sp|Q09993|ASTER_CAEEL Protein Asterix OS=Caenorhabditis elegans GN=K10B2.4 PE=3 SV=1 Back     alignment and function description
>sp|Q6Q7K0|ASTER_PIG Protein Asterix OS=Sus scrofa GN=WDR83OS PE=2 SV=1 Back     alignment and function description
>sp|Q6ZWX0|ASTER_MOUSE Protein Asterix OS=Mus musculus GN=Wdr83os PE=2 SV=1 Back     alignment and function description
>sp|Q9Y284|ASTER_HUMAN Protein Asterix OS=Homo sapiens GN=WDR83OS PE=2 SV=1 Back     alignment and function description
>sp|Q2M2T6|ASTER_BOVIN Protein Asterix OS=Bos taurus GN=WDR83OS PE=3 SV=1 Back     alignment and function description
>sp|F8RT80|ASTER_CHICK Protein Asterix OS=Gallus gallus GN=WDR83OS PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query49
156541914110 PREDICTED: UPF0139 membrane protein pMsm 1.0 0.445 0.918 5e-19
393911353 901 metallo-beta-lactamase superfamily prote 1.0 0.054 0.755 1e-18
307175090 311 UPF0139 membrane protein C19orf56-like p 1.0 0.157 0.836 1e-18
110761841109 PREDICTED: UPF0139 membrane protein pMsm 1.0 0.449 0.897 1e-18
383858981110 PREDICTED: protein Asterix-like [Megachi 1.0 0.445 0.877 1e-18
170065601108 conserved hypothetical protein [Culex qu 1.0 0.453 0.897 3e-18
118778641109 AGAP007000-PA [Anopheles gambiae str. PE 1.0 0.449 0.877 5e-18
15713834777 hypothetical protein AaeL_AAEL013992 [Ae 1.0 0.636 0.897 5e-18
312384122109 hypothetical protein AND_24204 [Anophele 1.0 0.449 0.877 5e-18
350425317110 PREDICTED: UPF0139 membrane protein pMsm 1.0 0.445 0.857 7e-18
>gi|156541914|ref|XP_001599728.1| PREDICTED: UPF0139 membrane protein pMsmaA27-like [Nasonia vitripennis] Back     alignment and taxonomy information
 Score = 98.6 bits (244), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 45/49 (91%), Positives = 47/49 (95%)

Query: 1  MNILGMIFSMCGLMMRLKWCAWAALYCACISFANSRVSDDGKQLLSSFM 49
          MNILGMIFSMCGLMMRLKWCAW ALYC+CISFANSRVSDD KQ+LSSFM
Sbjct: 36 MNILGMIFSMCGLMMRLKWCAWVALYCSCISFANSRVSDDTKQILSSFM 84




Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|393911353|gb|EFO27292.2| metallo-beta-lactamase superfamily protein [Loa loa] Back     alignment and taxonomy information
>gi|307175090|gb|EFN65232.1| UPF0139 membrane protein C19orf56-like protein [Camponotus floridanus] Back     alignment and taxonomy information
>gi|110761841|ref|XP_001120704.1| PREDICTED: UPF0139 membrane protein pMsmaA27-like [Apis mellifera] gi|380027377|ref|XP_003697403.1| PREDICTED: UPF0139 membrane protein pMsmaA27-like isoform 1 [Apis florea] gi|380027379|ref|XP_003697404.1| PREDICTED: UPF0139 membrane protein pMsmaA27-like isoform 2 [Apis florea] Back     alignment and taxonomy information
>gi|383858981|ref|XP_003704977.1| PREDICTED: protein Asterix-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|170065601|ref|XP_001868007.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167862526|gb|EDS25909.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|118778641|ref|XP_308770.3| AGAP007000-PA [Anopheles gambiae str. PEST] gi|116132482|gb|EAA04290.3| AGAP007000-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|157138347|ref|XP_001657256.1| hypothetical protein AaeL_AAEL013992 [Aedes aegypti] gi|157138349|ref|XP_001657257.1| hypothetical protein AaeL_AAEL013992 [Aedes aegypti] gi|108869506|gb|EAT33731.1| AAEL013992-PA [Aedes aegypti] gi|108869507|gb|EAT33732.1| AAEL013992-PB [Aedes aegypti] Back     alignment and taxonomy information
>gi|312384122|gb|EFR28927.1| hypothetical protein AND_24204 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|350425317|ref|XP_003494083.1| PREDICTED: UPF0139 membrane protein pMsmaA27-like [Bombus impatiens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query49
FB|FBgn0035592108 CG10674 [Drosophila melanogast 1.0 0.453 0.857 1.2e-19
UNIPROTKB|Q2M2T6106 WDR83OS "Protein Asterix" [Bos 1.0 0.462 0.755 2e-17
UNIPROTKB|Q9Y284106 WDR83OS "Protein Asterix" [Hom 1.0 0.462 0.755 2e-17
UNIPROTKB|Q6Q7K0106 WDR83OS "Protein Asterix" [Sus 1.0 0.462 0.755 2e-17
MGI|MGI:3041257106 BC056474 "cDNA sequence BC0564 1.0 0.462 0.755 2e-17
ZFIN|ZDB-GENE-040426-1674106 zgc:73111 "zgc:73111" [Danio r 1.0 0.462 0.755 2.5e-17
UNIPROTKB|F8RT80101 WDR83OS "Protein Asterix" [Gal 1.0 0.485 0.734 3.2e-17
FB|FBgn0035592 CG10674 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 42/49 (85%), Positives = 46/49 (93%)

Query:     1 MNILGMIFSMCGLMMRLKWCAWAALYCACISFANSRVSDDGKQLLSSFM 49
             MNILGMIFSMCGLMM+LKWCAW ALYC+CISFA+SR SDD KQ+LSSFM
Sbjct:    37 MNILGMIFSMCGLMMKLKWCAWFALYCSCISFASSRASDDAKQVLSSFM 85




GO:0005575 "cellular_component" evidence=ND
GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
UNIPROTKB|Q2M2T6 WDR83OS "Protein Asterix" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y284 WDR83OS "Protein Asterix" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q6Q7K0 WDR83OS "Protein Asterix" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:3041257 BC056474 "cDNA sequence BC056474" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1674 zgc:73111 "zgc:73111" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F8RT80 WDR83OS "Protein Asterix" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9VRJ8ASTER_DROMENo assigned EC number0.85711.00.4537yesN/A
Q2M2T6ASTER_BOVINNo assigned EC number0.75511.00.4622yesN/A
F8RT80ASTER_CHICKNo assigned EC number0.73461.00.4851yesN/A
Q6Q7K0ASTER_PIGNo assigned EC number0.75511.00.4622yesN/A
Q09993ASTER_CAEELNo assigned EC number0.75511.00.4336yesN/A
Q9Y284ASTER_HUMANNo assigned EC number0.75511.00.4622yesN/A
Q6ZWX0ASTER_MOUSENo assigned EC number0.75511.00.4622yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query49
pfam03669103 pfam03669, UPF0139, Uncharacterized protein family 1e-26
>gnl|CDD|190709 pfam03669, UPF0139, Uncharacterized protein family (UPF0139) Back     alignment and domain information
 Score = 91.4 bits (227), Expect = 1e-26
 Identities = 36/49 (73%), Positives = 41/49 (83%)

Query: 1  MNILGMIFSMCGLMMRLKWCAWAALYCACISFANSRVSDDGKQLLSSFM 49
          MN LGMIFSMCGLMMRLKWC+W A+ C+ ISFAN R S+D KQ+ SSFM
Sbjct: 35 MNFLGMIFSMCGLMMRLKWCSWLAIICSAISFANMRNSNDLKQISSSFM 83


Length = 103

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 49
KOG3462|consensus105 99.97
PF03669103 UPF0139: Uncharacterised protein family (UPF0139); 99.92
>KOG3462|consensus Back     alignment and domain information
Probab=99.97  E-value=2.6e-31  Score=165.24  Aligned_cols=49  Identities=80%  Similarity=1.467  Sum_probs=48.2

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHhhcC
Q psy2308           1 MNILGMIFSMCGLMMRLKWCAWAALYCACISFANSRVSDDGKQLLSSFM   49 (49)
Q Consensus         1 ~~~l~~ifg~~Glmmk~K~~aW~al~c~~~S~aN~k~~dD~KQi~ssfm   49 (49)
                      ||+||||||+||+|+|+|||+|+|++||++||||+|++||+|||.||||
T Consensus        36 mn~lgmIfsmcGlM~r~KwCsWlAl~cs~iSfAn~R~seD~KQi~ssfM   84 (105)
T KOG3462|consen   36 MNFLGMIFSMCGLMFRLKWCSWLALYCSCISFANSRNSEDAKQISSSFM   84 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence            6999999999999999999999999999999999999999999999997



>PF03669 UPF0139: Uncharacterised protein family (UPF0139); InterPro: IPR005351 This is a small family of proteins of unknown function which appear to be related to the hypothetical protein CG10674 from Drosophila melanogaster (Fruit fly)(Q9VRJ8 from SWISSPROT) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00