Psyllid ID: psy2558

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MSCFYFFAGVALLSLTVSVSSFMVVGDEKLHHLHHVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKYLGFKLKPSYADRSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV
cHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHcccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccEEEccEEEccccHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccccEEEEEEEccccccccccccccEEEEEcccccccccccEEEEEccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHcccccccccccccccccccccccccEEEHHHHcccccccEccccccHHHHHHHHHHHHHHHHcccccccEcHHHHHHHcccccHHHcccHHHHHHHHHHHcccEEEEccccccccccccccccHHHccEcccEEEEccccHHHHHHHHHHHccEEEEEccHHHHHccccEEcccHHHccccccccccEEEEEEccccccccEEcccEEEEEEccEccccccccEEEEEcccccHHcccccEEEEc
MSCFYFFAGVALLSLTVSVSSFmvvgdeklhhlhhVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLlqdtehgsgvyglnefsdlsTAEFQAKYLGfklkpsyadrsvpamipnitlprafdwreydavtgvkdqtmcgsswafsttgnIEGVYAAKTKKLVSLSEQelidcdqeddgceggsiSNAFDTIMSKlgggleeektypyrgddkacrlnkkatqvkingyvsvsrdETDMAKYLVENGPMAVAINAYALQFYVtgvshpiqffcdggnenlsHSVLIVGYgvdrtkfthkaVPYWIIknswgegwgekgYFRLyrgdgscginDYVRSALV
MSCFYFFAGVALLSLTVSVSSFMVVGDEKLHHLHHVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKYLGFKLKPSYADRSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLGGgleeektypyrgddkacrlnkkatqvkingyvsvsrdeTDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWiiknswgegwgEKGYFRLYRGDGSCGINDYVRSALV
MSCFYFFAGvallsltvsvssfmvvGDEKLHHLHHVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKYLGFKLKPSYADRSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIdcdqeddgceggSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV
**CFYFFAGVALLSLTVSVSSFMVVGDEKLHHLHHVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKYLGFKLKPSYADRSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQ***GCEGGSISNAFDTIMSKLGGGL***KTYPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVR****
*SCFYFFAGVALLSLTVSVSSFMVVGDEKL***HHVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKYL********************TLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV
MSCFYFFAGVALLSLTVSVSSFMVVGDEKLHHLHHVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKYLGFKLKPSYADRSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV
MSCFYFFAGVALLSLTVSVSSFMVVGDEKLHHLHHVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKYLGFKL*******SVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV
iiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSCFYFFAGVALLSLTVSVSSFMVVGDEKLHHLHHVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKYLGFKLKPSYADRSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query348 2.2.26 [Sep-21-2011]
Q9VN93614 Putative cysteine protein yes N/A 0.896 0.508 0.445 6e-77
Q26534319 Cathepsin L OS=Schistosom N/A N/A 0.798 0.871 0.477 2e-70
P25804363 Cysteine proteinase 15A O N/A N/A 0.893 0.856 0.416 1e-66
Q9R013462 Cathepsin F OS=Mus muscul yes N/A 0.925 0.696 0.426 7e-66
P43295361 Probable cysteine protein no N/A 0.925 0.891 0.403 3e-63
Q9UBX1484 Cathepsin F OS=Homo sapie yes N/A 0.916 0.659 0.413 3e-63
P43296368 Cysteine proteinase RD19a no N/A 0.882 0.834 0.414 9e-63
P04988343 Cysteine proteinase 1 OS= yes N/A 0.916 0.930 0.385 1e-59
Q10716371 Cysteine proteinase 1 OS= N/A N/A 0.844 0.792 0.389 2e-57
Q8V5U0367 Viral cathepsin OS=Heliot N/A N/A 0.841 0.798 0.370 7e-57
>sp|Q9VN93|CPR1_DROME Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2 Back     alignment and function desciption
 Score =  287 bits (735), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 200/321 (62%), Gaps = 9/321 (2%)

Query: 31  HHLHHVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNE 90
           H    V H  LF  F  +  + Y +  E   RL IF  NL+ I+ L   E GS  YG+ E
Sbjct: 299 HRFDKVDH--LFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITE 356

Query: 91  FSDLSTAEFQAKYLGFKLKPSYADRSVPAMIPNI--TLPRAFDWREYDAVTGVKDQTMCG 148
           F+D++++E++ +   ++   + A     A++P     LP+ FDWR+ DAVT VK+Q  CG
Sbjct: 357 FADMTSSEYKERTGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCG 416

Query: 149 SSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLGGGL 208
           S WAFS TGNIEG+YA KT +L   SEQEL+DCD  D  C GG + NA+  I  K  GGL
Sbjct: 417 SCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAI--KDIGGL 474

Query: 209 EEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVAINAYALQ 267
           E E  YPY+     C  N+  + V++ G+V + + +ET M ++L+ NGP+++ INA A+Q
Sbjct: 475 EYEAEYPYKAKKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQ 534

Query: 268 FYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGY 327
           FY  GVSHP +  C    +NL H VL+VGYGV      HK +PYWI+KNSWG  WGE+GY
Sbjct: 535 FYRGGVSHPWKALC--SKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGY 592

Query: 328 FRLYRGDGSCGINDYVRSALV 348
           +R+YRGD +CG+++   SA++
Sbjct: 593 YRVYRGDNTCGVSEMATSAVL 613
May have a role in autophagic cell death.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|Q26534|CATL_SCHMA Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1 Back     alignment and function description
>sp|P25804|CYSP_PEA Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1 Back     alignment and function description
>sp|Q9R013|CATF_MOUSE Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1 Back     alignment and function description
>sp|P43295|A494_ARATH Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2 Back     alignment and function description
>sp|Q9UBX1|CATF_HUMAN Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1 Back     alignment and function description
>sp|P43296|RD19A_ARATH Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1 Back     alignment and function description
>sp|P04988|CYSP1_DICDI Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2 Back     alignment and function description
>sp|Q10716|CYSP1_MAIZE Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1 Back     alignment and function description
>sp|Q8V5U0|CATV_NPVHZ Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query348
161408101 803 cathepsin F-like cysteine protease [Plau 0.982 0.425 0.480 4e-91
244790097 586 cathepsin F isoform 2 precursor [Acyrtho 0.867 0.515 0.527 5e-91
307200028 1032 Putative cysteine proteinase CG12163 [Ha 0.908 0.306 0.504 4e-89
307175778 887 Putative cysteine proteinase CG12163 [Ca 0.899 0.352 0.510 5e-89
242014216434 Cathepsin F precursor, putative [Pedicul 0.859 0.688 0.516 6e-88
383863617 884 PREDICTED: uncharacterized protein LOC10 0.882 0.347 0.514 3e-87
332026794 774 Putative cysteine proteinase [Acromyrmex 0.879 0.395 0.495 3e-87
350421176 884 PREDICTED: hypothetical protein LOC10074 0.887 0.349 0.489 1e-86
260234113 2676 cysteine proteinase inhibitor precursor 0.893 0.116 0.496 8e-86
401758208 537 cathepsin F-like protease, partial [Chil 0.893 0.579 0.501 1e-85
>gi|161408101|dbj|BAF94154.1| cathepsin F-like cysteine protease [Plautia stali] Back     alignment and taxonomy information
 Score =  341 bits (874), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 222/366 (60%), Gaps = 24/366 (6%)

Query: 3   CFYFFAGVALLSLTVSVSSFMVVGD------EKLHHLHHVKHTALFNYFLEQH------- 49
           C +   G  L  LTV   S++   D      + +H +  + H+A      EQ        
Sbjct: 442 CPFQEEGRMLCQLTVWERSWLKKIDLTSSKCDPIHTVMDISHSAELLGVDEQDKDYIKFK 501

Query: 50  ------NKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKY 103
                  ++Y T  E   R  IF  N++K   LQ TE G+  YG+  FSD+S+ EF+  Y
Sbjct: 502 FFTKKFQRSYKTTEELKKRFRIFRANMKKADYLQKTEQGTAKYGVTIFSDISSKEFKKHY 561

Query: 104 LGFKLK-PSYADRSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGV 162
           LG K + P    +   A IPNITLP  +DWR Y+AVT VK+Q MCGS WAFS TGNIEG 
Sbjct: 562 LGLKKRTPDIKFKQEMAQIPNITLPEEYDWRNYNAVTPVKNQGMCGSCWAFSVTGNIEGQ 621

Query: 163 YAAKTKKLVSLSEQELIDCDQEDDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKA 222
           YA KT  LVSLSEQEL+DCD+ DDGCEGG    A+  I     GGLE E  YPY G D  
Sbjct: 622 YAIKTGNLVSLSEQELVDCDKYDDGCEGGLFETAYHAIEEL--GGLELESDYPYSGRDNT 679

Query: 223 CRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCD 282
           C  N    +V I   V++S DETDMAK+LV NGP+++ INA A+QFY+ GVSHP++F CD
Sbjct: 680 CHFNSSEVRVSITSSVNISNDETDMAKWLVANGPISIGINANAMQFYLGGVSHPLKFLCD 739

Query: 283 GGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDY 342
              + L H VLIVGYG+ RT   H+ +PYW+IKNSW   WG KGY+ LYRGDGSCG+N +
Sbjct: 740 P--KTLDHGVLIVGYGIHRTWLLHRHLPYWLIKNSWSSYWGAKGYYMLYRGDGSCGVNQW 797

Query: 343 VRSALV 348
             SA++
Sbjct: 798 PSSAVL 803

Source: Plautia stali

Species: Plautia stali

Genus: Plautia

Family: Pentatomidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|244790097|ref|NP_001156454.1| cathepsin F isoform 2 precursor [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|307200028|gb|EFN80374.1| Putative cysteine proteinase CG12163 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|307175778|gb|EFN65613.1| Putative cysteine proteinase CG12163 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|242014216|ref|XP_002427787.1| Cathepsin F precursor, putative [Pediculus humanus corporis] gi|212512256|gb|EEB15049.1| Cathepsin F precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|383863617|ref|XP_003707276.1| PREDICTED: uncharacterized protein LOC100880620 [Megachile rotundata] Back     alignment and taxonomy information
>gi|332026794|gb|EGI66903.1| Putative cysteine proteinase [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|350421176|ref|XP_003492760.1| PREDICTED: hypothetical protein LOC100745708 [Bombus impatiens] Back     alignment and taxonomy information
>gi|260234113|dbj|BAI44279.1| cysteine proteinase inhibitor precursor [Manduca sexta] gi|261336196|dbj|BAH59606.2| cysteine proteinase inhibitor precursor [Manduca sexta] Back     alignment and taxonomy information
>gi|401758208|gb|AFQ01139.1| cathepsin F-like protease, partial [Chilo suppressalis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query348
FB|FBgn0260462614 CG12163 [Drosophila melanogast 0.910 0.516 0.425 3.6e-66
WB|WBGene00007055477 tag-196 [Caenorhabditis elegan 0.844 0.616 0.448 2e-63
ZFIN|ZDB-GENE-030131-9831473 ctsf "cathepsin F" [Danio reri 0.870 0.640 0.426 1.1e-62
RGD|1308181462 Ctsf "cathepsin F" [Rattus nor 0.870 0.655 0.424 7.1e-61
UNIPROTKB|Q0VCU3460 CTSF "Uncharacterized protein" 0.870 0.658 0.408 1.5e-60
UNIPROTKB|E2RR02460 CTSF "Uncharacterized protein" 0.870 0.658 0.410 1.9e-60
UNIPROTKB|F1RU48460 CTSF "Uncharacterized protein" 0.870 0.658 0.421 1.9e-60
MGI|MGI:1861434462 Ctsf "cathepsin F" [Mus muscul 0.870 0.655 0.415 5e-60
UNIPROTKB|Q9UBX1484 CTSF "Cathepsin F" [Homo sapie 0.870 0.626 0.405 3.2e-58
TAIR|locus:2130180373 AT4G16190 [Arabidopsis thalian 0.873 0.815 0.398 1.6e-54
FB|FBgn0260462 CG12163 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
 Identities = 140/329 (42%), Positives = 199/329 (60%)

Query:    27 DEKLH--HLHHV-KHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGS 83
             ++K H  H H   K   LF  F  +  + Y +  E   RL IF  NL+ I+ L   E GS
Sbjct:   290 EKKTHKKHSHRFDKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGS 349

Query:    84 GVYGLNEFSDLSTAEFQAKYLGFKLKPSYADRSVPAMIPNI--TLPRAFDWREYDAVTGV 141
               YG+ EF+D++++E++ +   ++   + A     A++P     LP+ FDWR+ DAVT V
Sbjct:   350 AKYGITEFADMTSSEYKERTGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQV 409

Query:   142 KDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIXXXXXXXXXXXXSISNAFDTIM 201
             K+Q  CGS WAFS TGNIEG+YA KT +L   SEQEL+             + NA+  I 
Sbjct:   410 KNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAI- 468

Query:   202 SKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPMAVA 260
              K  GGLE E  YPY+     C  N+  + V++ G+V + + +ET M ++L+ NGP+++ 
Sbjct:   469 -KDIGGLEYEAEYPYKAKKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIG 527

Query:   261 INAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGV-DRTKFTHKAVPYWIIKNSWG 319
             INA A+QFY  GVSHP +  C    +NL H VL+VGYGV D   F HK +PYWI+KNSWG
Sbjct:   528 INANAMQFYRGGVSHPWKALCS--KKNLDHGVLVVGYGVSDYPNF-HKTLPYWIVKNSWG 584

Query:   320 EGWGEKGYFRLYRGDGSCGINDYVRSALV 348
               WGE+GY+R+YRGD +CG+++   SA++
Sbjct:   585 PRWGEQGYYRVYRGDNTCGVSEMATSAVL 613
GO:0035071 "salivary gland cell autophagic cell death" evidence=IEP
GO:0048102 "autophagic cell death" evidence=IEP
GO:0004197 "cysteine-type endopeptidase activity" evidence=ISS
GO:0006508 "proteolysis" evidence=ISS
GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA
GO:0045169 "fusome" evidence=IDA
GO:0035220 "wing disc development" evidence=IGI
GO:0022416 "chaeta development" evidence=IGI
WB|WBGene00007055 tag-196 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-9831 ctsf "cathepsin F" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1308181 Ctsf "cathepsin F" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VCU3 CTSF "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RR02 CTSF "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RU48 CTSF "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1861434 Ctsf "cathepsin F" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q9UBX1 CTSF "Cathepsin F" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
TAIR|locus:2130180 AT4G16190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9R013CATF_MOUSE3, ., 4, ., 2, 2, ., 4, 10.42640.92520.6969yesN/A
Q9UBX1CATF_HUMAN3, ., 4, ., 2, 2, ., 4, 10.41330.91660.6590yesN/A
P04988CYSP1_DICDI3, ., 4, ., 2, 2, ., -0.38590.91660.9300yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.921

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 1e-95
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 2e-94
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 5e-75
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 1e-70
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 1e-61
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 5e-54
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 4e-41
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 1e-36
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 1e-34
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 1e-34
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 6e-17
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 2e-14
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 7e-12
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 8e-12
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 1e-11
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 5e-08
pfam03051438 pfam03051, Peptidase_C1_2, Peptidase C1-like famil 0.002
cd00585437 cd00585, Peptidase_C1B, Peptidase C1B subfamily (M 0.004
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information 
 Score =  282 bits (725), Expect = 1e-95
 Identities = 109/222 (49%), Positives = 130/222 (58%), Gaps = 17/222 (7%)

Query: 126 LPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQED 185
           LP +FDWRE  AVT VKDQ  CGS WAFS  G +EG Y  KT KLVSLSEQ+L+DCD  +
Sbjct: 1   LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDTGN 60

Query: 186 DGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKK-ATQVKINGYVSVS-RD 243
           +GC GG   NAF+ I     GG+  E  YPY   D  C+  K  +   KI GY  V   D
Sbjct: 61  NGCNGGLPDNAFEYIKKN--GGIVTESDYPYTAHDGTCKFKKSNSKYAKIKGYGDVPYND 118

Query: 244 ETDMAKYLVENGPMAVAINAYA--LQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDR 301
           E  +   L +NGP++VAI+AY    Q Y +GV    +  C G    L H+VLIVGYG + 
Sbjct: 119 EEALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTE--CSG---ELDHAVLIVGYGTE- 172

Query: 302 TKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYV 343
                  VPYWI+KNSWG  WGE GYFR+ RG   CGI    
Sbjct: 173 -----NGVPYWIVKNSWGTDWGENGYFRIARGVNECGIASEA 209

Length = 213
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information
>gnl|CDD|202517 pfam03051, Peptidase_C1_2, Peptidase C1-like family Back     alignment and domain information
>gnl|CDD|238328 cd00585, Peptidase_C1B, Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 348
KOG1542|consensus372 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543|consensus325 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
KOG1544|consensus470 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.97
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.93
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.78
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.7
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.51
COG3579 444 PepC Aminopeptidase C [Amino acid transport and me 99.17
KOG4128|consensus 457 97.95
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 96.59
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 96.39
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 91.34
PF09778212 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IP 89.23
PF14399 317 Transpep_BrtH: NlpC/p60-like transpeptidase 87.69
COG4990195 Uncharacterized protein conserved in bacteria [Fun 81.18
PF12385166 Peptidase_C70: Papain-like cysteine protease AvrRp 80.85
>KOG1542|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.9e-90  Score=623.05  Aligned_cols=302  Identities=48%  Similarity=0.874  Sum_probs=276.5

Q ss_pred             hHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccCCCccccccCcCCCCCHHHHHhhhhccccC--CCCCC
Q psy2558          37 KHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDTEHGSGVYGLNEFSDLSTAEFQAKYLGFKLK--PSYAD  114 (348)
Q Consensus        37 ~~~~~f~~~~~~~~k~Y~s~~e~~~R~~~f~~n~~~I~~~N~~~~~~~~~g~N~FsDlt~~Ef~~~~~~~~~~--~~~~~  114 (348)
                      ..++.|..|+.+|+|+|.+.+|...|+.+|++|+..++++++.+.|++.||+|+|||||+|||++++++.+..  +....
T Consensus        66 ~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~~~~~  145 (372)
T KOG1542|consen   66 GLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSKLPGD  145 (372)
T ss_pred             chHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhccccccccCccc
Confidence            3588999999999999999999999999999999999999988888999999999999999999999987663  11111


Q ss_pred             CCCCCCCCCCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccCCCCCCCCCChH
Q psy2558         115 RSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDDGCEGGSIS  194 (348)
Q Consensus       115 ~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~~gc~GG~~~  194 (348)
                      ......++...||++||||++|+||||||||+||||||||+++++|++++|++|++++||||+|+||+..++||+||.+.
T Consensus       146 ~~~~~~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~~d~gC~GGl~~  225 (372)
T KOG1542|consen  146 AAEAPIEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDSCDNGCNGGLMD  225 (372)
T ss_pred             cccCcCCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccCcCCcCCCCChh
Confidence            11111346678999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCccCCCcccccCCCC-ccccccccceEEEcceEEeCcCHHHHHHHHHhCCCEEEEEEcCcCccccCce
Q psy2558         195 NAFDTIMSKLGGGLEEEKTYPYRGDDK-ACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAYALQFYVTGV  273 (348)
Q Consensus       195 ~a~~~~~~~~~~Gi~~e~~yPy~~~~~-~c~~~~~~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~v~~~~~~f~~y~~Gi  273 (348)
                      .|++|+++.  +|+..|++|||+++.+ .|...+....+.|.++..++.||++|.++|.++|||+|+|++..+|+|.+||
T Consensus       226 nA~~~~~~~--gGL~~E~dYPY~g~~~~~C~~~~~~~~v~I~~f~~l~~nE~~ia~wLv~~GPi~vgiNa~~mQ~YrgGV  303 (372)
T KOG1542|consen  226 NAFKYIKKA--GGLEKEKDYPYTGKKGNQCHFDKSKIVVSIKDFSMLSNNEDQIAAWLVTFGPLSVGINAKPMQFYRGGV  303 (372)
T ss_pred             HHHHHHHHh--CCccccccCCccccCCCccccchhhceEEEeccEecCCCHHHHHHHHHhcCCeEEEEchHHHHHhcccc
Confidence            999998887  6999999999999988 9999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCC-CcCEEEEEcCCCCCCCCCceEEEEcCCCeeccCCceeEeeC
Q psy2558         274 SHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHK-AVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV  348 (348)
Q Consensus       274 ~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~-g~~ywivkNSWG~~WG~~Gy~~i~~~~~~cgi~~~~~~~~~  348 (348)
                      +.+.+..|  ++..++|+|+|||||.      .. .++|||||||||++|||+||+|+.||.|.|||+++++.+++
T Consensus       304 ~~P~~~~C--s~~~~~HaVLlvGyG~------~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~N~CGi~~mvss~~v  371 (372)
T KOG1542|consen  304 SCPSKYIC--SPKLLNHAVLLVGYGS------SGYEKPYWIVKNSWGTSWGEKGYYKLCRGSNACGIADMVSSAAV  371 (372)
T ss_pred             cCCCcccC--CccccCceEEEEeecC------CCCCCceEEEECCccccccccceEEEeccccccccccchhhhhc
Confidence            99866689  4666999999999998      44 78999999999999999999999999999999999988754

>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543|consensus Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>KOG1544|consensus Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4128|consensus Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information
>PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information
>COG4990 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF12385 Peptidase_C70: Papain-like cysteine protease AvrRpt2; InterPro: IPR022118 This is a family of cysteine proteases, found in actinobacteria, protobacteria and firmicutes Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 8e-43
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 9e-42
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 2e-39
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 4e-39
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 2e-38
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 3e-38
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 5e-38
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 2e-37
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 3e-37
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 6e-37
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 6e-37
3hwn_A258 Cathepsin L With Az13010160 Length = 258 3e-36
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 3e-36
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 1e-35
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 5e-35
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 9e-35
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 9e-35
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 1e-34
3h89_A220 A Combined Crystallographic And Molecular Dynamics 1e-34
3of8_A221 Structural Basis For Reversible And Irreversible In 2e-34
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 2e-34
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 2e-34
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 3e-34
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 3e-34
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 4e-33
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 2e-32
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 2e-32
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 2e-32
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 2e-32
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 2e-32
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 3e-32
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 5e-32
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 7e-32
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 1e-31
2vhs_A217 Cathsilicatein, A Chimera Length = 217 4e-31
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 8e-31
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 9e-31
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 2e-30
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 5e-30
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 6e-30
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 6e-30
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 6e-30
1pci_A322 Procaricain Length = 322 1e-29
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 1e-29
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 4e-29
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 8e-29
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 8e-29
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 9e-29
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 1e-28
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 1e-28
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 1e-28
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 3e-28
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 3e-28
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 3e-28
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 3e-28
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 5e-28
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 6e-28
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 2e-27
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 4e-27
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 5e-27
2act_A220 Crystallographic Refinement Of The Structure Of Act 7e-27
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 9e-27
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 1e-26
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 1e-26
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 1e-26
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 1e-26
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 2e-26
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 3e-24
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 3e-24
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 5e-24
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 5e-24
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 5e-24
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 6e-24
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 2e-23
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 3e-22
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 7e-21
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 3e-20
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 3e-19
1ppo_A216 Determination Of The Structure Of Papaya Protease O 3e-19
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 4e-16
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 2e-15
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 3e-14
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 4e-14
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 7e-14
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 1e-13
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 1e-13
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 3e-13
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 1e-12
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 1e-12
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 2e-12
1mir_A322 Rat Procathepsin B Length = 322 2e-12
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 7e-12
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 8e-12
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 3e-11
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 4e-11
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 4e-11
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 4e-11
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 4e-11
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 5e-11
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 1e-10
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 1e-10
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 1e-10
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 3e-10
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 6e-08
3ch2_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 1e-05
2wbf_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 3e-05
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure 
Iteration: 1

 Score =  171 bits (432), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 99/222 (44%), Positives = 134/222 (60%), Gaps = 10/222 (4%)
Query: 127 PRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIXXXXXXX 186
           P  +DWR   AVT VKDQ MCGS WAFS TGN+EG +      L+SLSEQEL+       
Sbjct: 2   PPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDK 61
Query: 187 XXXXXSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETD 246
                  SNA+  I  K  GGLE E  Y Y+G  ++C+ + +  +V I   V +S++E  
Sbjct: 62  ACMGGLPSNAYSAI--KNLGGLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELSQNEQK 119
Query: 247 MAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTH 306
           +A +L + GP++VAINA+ +QFY  G+S P++  C      + H+VL+VGYG        
Sbjct: 120 LAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCS--PWLIDHAVLLVGYG------QR 171
Query: 307 KAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV 348
             VP+W IKNSWG  WGEKGY+ L+RG G+CG+N    SA+V
Sbjct: 172 SDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 Back     alignment and structure
>pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-119
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-115
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-113
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 1e-113
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 1e-111
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 1e-111
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-111
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-109
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 1e-109
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 1e-108
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 7e-99
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 6e-98
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 4e-97
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 1e-96
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 3e-95
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 2e-93
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 1e-91
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 1e-91
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 4e-91
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 6e-91
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 5e-90
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-89
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 1e-89
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 1e-88
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 6e-88
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-87
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 2e-87
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 5e-87
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 7e-87
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 3e-86
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 2e-85
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 9e-84
3u8e_A222 Papain-like cysteine protease; papain-like cystein 5e-78
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 7e-74
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 6e-69
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 7e-68
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 1e-67
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 4e-66
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 4e-63
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 2e-18
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 1e-11
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 3e-08
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 5e-06
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 2e-05
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 8e-04
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 7e-05
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 2e-04
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
 Score =  347 bits (893), Expect = e-119
 Identities = 106/333 (31%), Positives = 156/333 (46%), Gaps = 35/333 (10%)

Query: 31  HHLHHVKHTAL--------FNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLL-QDTEH 81
           HH HH++ +AL        +  F   + ++Y    E   R  IF   L   +   +    
Sbjct: 3   HHHHHLEGSALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQ 62

Query: 82  GSGVY--GLNEFSDLSTAEFQAKYLGFKLKPSYADRSVPAMI-------PNITLPRAFDW 132
           G   Y  G+N F+D++  E +A   G  +        +P           ++  P +FDW
Sbjct: 63  GLVSYTLGVNLFTDMTPEEMKAYTHGLIMPADLHKNGIPIKTREDLGLNASVRYPASFDW 122

Query: 133 REYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLV--SLSEQELIDCDQEDDGCEG 190
           R+   V+ VK+Q  CGSSWAFS+TG IE             S+SEQ+L+DC     GC G
Sbjct: 123 RDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPNALGCSG 182

Query: 191 GSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSV-SRDETDMAK 249
           G +++AF  +     GG++ E  YPY   D  C  +      +++GYV +   DE  +A 
Sbjct: 183 GWMNDAFTYVAQN--GGIDSEGAYPYEMADGNCHYDPNQVAARLSGYVYLSGPDENMLAD 240

Query: 250 YLVENGPMAVAINA-YALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKA 308
            +   GP+AVA +A      Y  GV +     C       +H+VLIVGYG          
Sbjct: 241 MVATKGPVAVAFDADDPFGSYSGGVYYNPT--C--ETNKFTHAVLIVGYG------NENG 290

Query: 309 VPYWIIKNSWGEGWGEKGYFRLYRG-DGSCGIN 340
             YW++KNSWG+GWG  GYF++ R  +  CGI 
Sbjct: 291 QDYWLVKNSWGDGWGLDGYFKIARNANNHCGIA 323
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Length = 453 Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Length = 457 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query348
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 100.0
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.75
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.71
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 97.75
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 97.29
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 97.23
3erv_A236 Putative C39-like peptidase; structural genomics, 85.66
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
Probab=100.00  E-value=1.4e-86  Score=625.43  Aligned_cols=306  Identities=33%  Similarity=0.629  Sum_probs=268.9

Q ss_pred             cCccchhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccc-CCCcccc--ccCcCCCCCHHHHHhhhhccc
Q psy2558          31 HHLHHVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDT-EHGSGVY--GLNEFSDLSTAEFQAKYLGFK  107 (348)
Q Consensus        31 ~~~~~~~~~~~f~~~~~~~~k~Y~s~~e~~~R~~~f~~n~~~I~~~N~~-~~~~~~~--g~N~FsDlt~~Ef~~~~~~~~  107 (348)
                      +++.+..++.+|++||++|+|+|.+.+|+.+|++||++|+++|++||+. +.+..+|  |+|+|+|||.|||++++++.+
T Consensus        11 ~~~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~   90 (331)
T 3qj3_A           11 SALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLI   90 (331)
T ss_dssp             --CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCC
T ss_pred             CCCCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccc
Confidence            3445667889999999999999998899999999999999999999953 3344455  999999999999999888755


Q ss_pred             cCCCC-C-C-CCCCCC----CCCCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCHHHh
Q psy2558         108 LKPSY-A-D-RSVPAM----IPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKK--LVSLSEQEL  178 (348)
Q Consensus       108 ~~~~~-~-~-~~~~~~----~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~--~~~lS~q~l  178 (348)
                      ..+.. . . ......    ....+||++||||++|+||||||||.||||||||++++||++++++++.  ++.||+|+|
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~L  170 (331)
T 3qj3_A           91 MPADLHKNGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQL  170 (331)
T ss_dssp             CCSSTTTTCEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHH
T ss_pred             ccccccccCcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHH
Confidence            43211 0 0 001000    0234799999999999999999999999999999999999999999998  999999999


Q ss_pred             hhccCCCCCCCCCChHHHHHHHHHhcCCCccCCCcccccCCCCccccccccceEEEcceEEeCc-CHHHHHHHHHhCCCE
Q psy2558         179 IDCDQEDDGCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSR-DETDMAKYLVENGPM  257 (348)
Q Consensus       179 ~dc~~~~~gc~GG~~~~a~~~~~~~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~-~~~~i~~~l~~~gPv  257 (348)
                      +||+..+.||+||++..|++|+.++  +||++|++|||.+..+.|...+....+++.+|..++. ++++||++|+++|||
T Consensus       171 vdC~~~~~GC~GG~~~~a~~yi~~~--~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV  248 (331)
T 3qj3_A          171 VDCVPNALGCSGGWMNDAFTYVAQN--GGIDSEGAYPYEMADGNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGPV  248 (331)
T ss_dssp             HHHCTTSCGGGCCCHHHHHHHHHHH--TCEEBTTTSCCCSSCCCCCCCTTSEEECCSEEEEESSCCHHHHHHHHHHHCCE
T ss_pred             hhhccCCCCCCCCCHHHHHHHHHHc--CCcCcccccCccCCCCCCCCCcccceeEeeEEEEeCCCCHHHHHHHHHhCCCE
Confidence            9999878999999999999999988  7999999999999999999887778889999999987 899999999999999


Q ss_pred             EEEEEcC-cCccccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC-C
Q psy2558         258 AVAINAY-ALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD-G  335 (348)
Q Consensus       258 ~v~~~~~-~f~~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~  335 (348)
                      +|+|++. .|++|++|||..+  .|  +...++|||+|||||+      ++|++|||||||||++|||+|||||+|+. |
T Consensus       249 ~v~i~a~~~f~~Y~~Gvy~~~--~c--~~~~~~HaV~iVGyg~------~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n  318 (331)
T 3qj3_A          249 AVAFDADDPFGSYSGGVYYNP--TC--ETNKFTHAVLIVGYGN------ENGQDYWLVKNSWGDGWGLDGYFKIARNANN  318 (331)
T ss_dssp             EEEECCCTTGGGEEEEEECCT--TC--CSSCCCEEEEEEEEEE------ETTEEEEEEECSBCTTSTBTTEEEEECSSSS
T ss_pred             EEEEEcccccccccCceEeCC--CC--CCCcCCEEEEEEEEec------cCCceEEEEEcCCCCCcCCCCEEEEEcCCCC
Confidence            9999994 5999999999985  68  3567899999999998      77999999999999999999999999998 9


Q ss_pred             eeccCCceeEeeC
Q psy2558         336 SCGINDYVRSALV  348 (348)
Q Consensus       336 ~cgi~~~~~~~~~  348 (348)
                      .|||+++++||+|
T Consensus       319 ~CgI~~~~~~p~v  331 (331)
T 3qj3_A          319 HCGIAGVASVPTL  331 (331)
T ss_dssp             GGGTTTSCEEEEC
T ss_pred             ccCcCCceeeeeC
Confidence            9999999999986
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 348
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 2e-61
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 5e-60
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1e-57
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 1e-55
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 9e-52
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 1e-51
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 1e-51
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 2e-51
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 5e-51
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 1e-50
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 5e-50
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 6e-50
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 3e-49
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 3e-49
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 4e-49
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 5e-49
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 8e-49
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 5e-48
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 2e-46
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 2e-40
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 2e-08
d2cb5a_453 d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi 1e-05
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Cathepsin F
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (492), Expect = 2e-61
 Identities = 104/222 (46%), Positives = 139/222 (62%), Gaps = 10/222 (4%)

Query: 127 PRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQEDD 186
           P  +DWR   AVT VKDQ MCGS WAFS TGN+EG +      L+SLSEQEL+DCD+ D 
Sbjct: 2   PPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDK 61

Query: 187 GCEGGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETD 246
            C GG  SNA+  I +   GGLE E  Y Y+G  ++C+ + +  +V I   V +S++E  
Sbjct: 62  ACMGGLPSNAYSAIKNL--GGLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELSQNEQK 119

Query: 247 MAKYLVENGPMAVAINAYALQFYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTH 306
           +A +L + GP++VAINA+ +QFY  G+S P           + H+VL+VGYG        
Sbjct: 120 LAAWLAKRGPISVAINAFGMQFYRHGISRP--LRPLCSPWLIDHAVLLVGYG------QR 171

Query: 307 KAVPYWIIKNSWGEGWGEKGYFRLYRGDGSCGINDYVRSALV 348
             VP+W IKNSWG  WGEKGY+ L+RG G+CG+N    SA+V
Sbjct: 172 SDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query348
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d3gcba_458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.82
d2cb5a_453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.75
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 96.53
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 95.31
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-80  Score=580.16  Aligned_cols=304  Identities=35%  Similarity=0.674  Sum_probs=259.9

Q ss_pred             chhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhccc-CCC--ccccccCcCCCCCHHHHHhhhhccccCCC
Q psy2558          35 HVKHTALFNYFLEQHNKTYATLVEYYSRLHIFSGNLRKIQLLQDT-EHG--SGVYGLNEFSDLSTAEFQAKYLGFKLKPS  111 (348)
Q Consensus        35 ~~~~~~~f~~~~~~~~k~Y~s~~e~~~R~~~f~~n~~~I~~~N~~-~~~--~~~~g~N~FsDlt~~Ef~~~~~~~~~~~~  111 (348)
                      +..++++|++||++|+|+|.+ +|+.+|++||++|+++|++||+. ..+  +.++|+|+|+|||+|||.++++.......
T Consensus         5 ~~~l~~~F~~f~~~~~K~Y~~-~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~   83 (316)
T d1cs8a_           5 DHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKP   83 (316)
T ss_dssp             CGGGHHHHHHHHHHTTCCCCT-THHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCC
T ss_pred             cHHHHHHHHHHHHHhCCcCCC-HHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccccccc
Confidence            345678899999999999965 57889999999999999999953 233  44559999999999999998876554322


Q ss_pred             CCCCCCCCCCCCCCCCceEEcccCCCCCccCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCHHHhhhccC--CCCCCC
Q psy2558         112 YADRSVPAMIPNITLPRAFDWREYDAVTGVKDQTMCGSSWAFSTTGNIEGVYAAKTKKLVSLSEQELIDCDQ--EDDGCE  189 (348)
Q Consensus       112 ~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~cgsCwAfA~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~~gc~  189 (348)
                      ...... ......+||++||||++|+++||||||.||||||||+++++|++++++++..+.||+|+|+||+.  .+.||.
T Consensus        84 ~~~~~~-~~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~~~~~~c~  162 (316)
T d1cs8a_          84 RKGKVF-QEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCN  162 (316)
T ss_dssp             SCCEEC-CCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGG
T ss_pred             ccCccc-cCcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhccccccCCCCC
Confidence            111111 11235579999999999999999999999999999999999999999999999999999999984  467899


Q ss_pred             CCChHHHHHHHHHhcCCCccCCCcccccCCCCccccccccceEEEcceEEeCcCHHHHHHHHHhCCCEEEEEEcC--cCc
Q psy2558         190 GGSISNAFDTIMSKLGGGLEEEKTYPYRGDDKACRLNKKATQVKINGYVSVSRDETDMAKYLVENGPMAVAINAY--ALQ  267 (348)
Q Consensus       190 GG~~~~a~~~~~~~~~~Gi~~e~~yPy~~~~~~c~~~~~~~~~~i~~~~~i~~~~~~i~~~l~~~gPv~v~~~~~--~f~  267 (348)
                      ||++..|+.|++.+  +++..|..|||.+....|...+......+..+.....+++.|+++|+.+|||++++++.  .|+
T Consensus       163 gg~~~~a~~y~~~~--g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gpv~v~i~~~~~~f~  240 (316)
T d1cs8a_         163 GGLMDYAFQYVQDN--GGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFL  240 (316)
T ss_dssp             CBCHHHHHHHHHHH--TCEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECCSCHHHHHHHHHHHCCEEEEECCCSHHHH
T ss_pred             CCchHHHHHHHHhc--CcccccccccccccccccccccccccccccccccccCcHHHHHHHHHHhCCeEEEEEeccchhc
Confidence            99999999999999  56889999999999888887766666777777777778999999999999999999983  799


Q ss_pred             cccCceecCCCccCCCCCCCCCeEEEEEEecCCCCcCCCCCcCEEEEEcCCCCCCCCCceEEEEcCC-CeeccCCceeEe
Q psy2558         268 FYVTGVSHPIQFFCDGGNENLSHSVLIVGYGVDRTKFTHKAVPYWIIKNSWGEGWGEKGYFRLYRGD-GSCGINDYVRSA  346 (348)
Q Consensus       268 ~y~~Gi~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~cgi~~~~~~~  346 (348)
                      +|++||+...  .|  +...++|||+|||||.+..  +.++++|||||||||++|||+|||||+|+. |+|||++.++||
T Consensus       241 ~y~~Gi~~~~--~c--~~~~~nHaV~iVGyG~d~~--~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~n~CGI~~~~~yP  314 (316)
T d1cs8a_         241 FYKEGIYFEP--DC--SSEDMDHGVLVVGYGFEST--ESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYP  314 (316)
T ss_dssp             TEEEEEECCT--TC--CSSCCCEEEEEEEEEEECC--SSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEE
T ss_pred             cccCCcccCC--CC--CCCcCCEEEEEEEEccccc--CCCCCeEEEEEeCCCCCcccCCEEEEeeCCCCcCccCCeeeee
Confidence            9999999875  67  4567899999999996421  156889999999999999999999999986 899999999999


Q ss_pred             eC
Q psy2558         347 LV  348 (348)
Q Consensus       347 ~~  348 (348)
                      +|
T Consensus       315 ~v  316 (316)
T d1cs8a_         315 TV  316 (316)
T ss_dssp             CC
T ss_pred             eC
Confidence            97
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure