Psyllid ID: psy2572

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260----
Protein Sequence
MVKYFENKTVFRFNWEQVAQGYWRRYPNPESLVKVKYSTCGVCLLMVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNNAPKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANLASTMSSTNQNFAINPDKLKEKAKKVTSDFATKSSKLLNVPNPS
Secondary Structure (PSIPRED)
ccccccccEEEEEEHHHHHccccccccccccccccccccccccccEEEEEEEcEEEEccHHHHHHHHHHHccccccccEEEEEEEEcEEEccEEEEEEEEEccccccccccccccccEEEEEEEEEEcccccEEEEEEEEcccccEEEEEEEEEEEEccccccEEEEEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHccccHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEcccEEEEEHHHHHHccHcccccccccccccccccccHHEEEEEEcccEEccccHHHHHHHHHHHcccccccEEEEEEEEEEEccccEEEEEEEEEEccccHHHHHHHccccEEEEEEEEEEcccccEEEEEEEEccccEEEEEEEEEEEEccccccccEEEEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHcHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MVKYFENKTVFRFNWEQVAQGYwrrypnpeslvkvKYSTCGVCLLMVKYFENKTVFRFNWEQVAQGYwrrypnpesthvlsedivdqritdnKLFTKRILTKtnnapkwgerfikTNKIKIveesicdpkektlttytrniGYTSVMSVIEKVEYKVSDENENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANLAStmsstnqnfainpdKLKEKAKKVTSDFatksskllnvpnps
Flexible Loop (DISEMBL)
mvkyfenktvfrfnweqVAQGYWRRYPNPESLVKVKYSTCGVCLLMVKYFENKTVFRFNWEQVAQGYWRRYPNPEsthvlsedivdqritdnklftkriltktnnapkwgerfiktnkikiveesicdpkektlttytrnigytsVMSVIEKVEykvsdenenwtlakrsvwidsKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANLASTMSSTNQNFAINPDKLKEKAKKVtsdfatksskllnvpnps
Low Complexity Region (SEG)
MVKYFENKTVFRFNWEQVAQGYWRRYPNPESLVKVKYSTCGVCLLMVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNNAPKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANLASTMSSTNQNFAINPDKLKEKAKKVTSDFATKSSKLLNVPNPS
Disordered region (IsUnstruct)
***YFENKTVFRFNWEQVAQGYWRRYPNPESLVKVKYSTCGVCLLMVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNNAPKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQ***********************************************
Disordered Region (DISOPRED)
**KY*ENKTVFRFNWEQVAQGYWRRYPN*****KV*YSTCGVCLLMVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNNAPKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILN********************************************************
Disordered Region (DISEMBL)
MVKYFENKTVFRFNWEQVAQGYWRRYPNPESLVKVKYSTCGVCLLMVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNNAPKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANLASTMSSTNQNFAINPDKLKEKAKKVTSDFATKSSKLLNVPNPS
Disordered Region (DISPRO)
MVKYFENKTVFRFNWEQVAQGYWRRYPNPESLVKVKYSTCGVCLLMVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNNAPKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQN*****************************SDFATKSSKLLN*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVKYFENKTVFRFNWEQVAQGYWRRYPNPESLVKVKYSTCGVCLLMVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNNAPKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANLASTMSSTNQNFAINPDKLKEKAKKVTSDFATKSSKLLNVPNPS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	264	2.2.26 [Sep-21-2011]
Q9V579	236	Protein preli-like OS=Dro	yes	N/A	0.818	0.915	0.406	3e-46
Q90673	215	PRELI domain-containing p	yes	N/A	0.799	0.981	0.414	4e-43
Q32KN9	219	PRELI domain-containing p	yes	N/A	0.613	0.739	0.463	6e-42
Q8R107	217	PRELI domain-containing p	yes	N/A	0.613	0.746	0.463	2e-41
Q9Y255	219	PRELI domain-containing p	yes	N/A	0.613	0.739	0.457	3e-41
Q9UT07	171	Protein ups1 homolog OS=S	yes	N/A	0.628	0.970	0.279	1e-18
Q54G07	228	Protein slowmo homolog OS	yes	N/A	0.553	0.640	0.283	2e-15
Q05776	175	Protein UPS1, mitochondri	yes	N/A	0.609	0.92	0.292	3e-14
Q04006	179	Protein UPS3, mitochondri	no	N/A	0.636	0.938	0.309	8e-14
P35200	230	Protein UPS2, mitochondri	no	N/A	0.625	0.717	0.291	3e-13

>sp|Q9V579|PREL_DROME Protein preli-like OS=Drosophila melanogaster GN=prel PE=2 SV=3

 Score =  185 bits (470), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/246 (40%), Positives = 145/246 (58%), Gaps = 30/246 (12%)

Query: 35  VKYSTCGVCLLMVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKL 94
           V  STC            +TVF ++W  V   YW RYPNP STHVL+ED + + + D KL
Sbjct: 3   VAASTC----------RTETVFDYSWMNVVVAYWNRYPNPSSTHVLTEDTIQREVRDGKL 52

Query: 95  FTKRILTKTNNAPKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVE 154
           F++R+L+KTN  PKWG RF     +KIVE+S+ DP +KT TT+TRN+G T +M V E V 
Sbjct: 53  FSRRLLSKTNPVPKWGARFYNNVPVKIVEDSVLDPVKKTFTTFTRNLGMTKIMKVDEIVV 112

Query: 155 YKVSDENENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNV 214
           Y  S++ +  TLA R  +I S+++GFS AI+ FG+ER+K N  K +NGFN++L  MFP+ 
Sbjct: 113 Y--SEQKDGSTLAVRRAYISSQVFGFSRAIRAFGIERFKANGNKASNGFNYVLRRMFPDS 170

Query: 215 LQQNANL--------------ASTMSSTNQNFAINPDKLKEKAKKVTSDF----ATKSSK 256
           L    +               A+T++ +  N ++N     + A KV  +F    A+K ++
Sbjct: 171 LVGGGHHQHAVTTTSPAGELPATTITVSTTNGSLNNQGALKSAAKVGYEFFKSHASKIAQ 230

Query: 257 LLNVPN 262
           L +V N
Sbjct: 231 LFSVKN 236

Drosophila melanogaster (taxid: 7227)

>sp|Q90673|PRLD1_CHICK PRELI domain-containing protein 1, mitochondrial OS=Gallus gallus GN=PRELID1 PE=2 SV=1

 Score =  175 bits (443), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 90/217 (41%), Positives = 129/217 (59%), Gaps = 6/217 (2%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTN 104
           M KY  +  V +  W+QV   +W+RYPNP S HVL+EDIV + +T D+KL ++R+LTKTN
Sbjct: 1   MGKYCASLGVLKGPWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTADHKLLSRRLLTKTN 60

Query: 105 NAPKWGERFIKTN---KIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDEN 161
             P+W ERF   N    + IVE+SI DPK +T+TT+T NI +  +M+V E+  Y+V+ EN
Sbjct: 61  RMPRWAERFFPANVAHNVYIVEDSIVDPKNRTMTTFTWNINHARLMAVEERCVYRVNPEN 120

Query: 162 ENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANL 221
            +WT  KR  W+ S ++G S A+Q+FGL R+K N+ K T GF ++L  M      +   L
Sbjct: 121 SSWTEVKREAWVSSSLFGVSRAVQEFGLARFKSNVTKSTKGFEYVLARMQGEAPSK--TL 178

Query: 222 ASTMSSTNQNFAINPDKLKEKAKKVTSDFATKSSKLL 258
             T     +          EKAK + S  ATK  + +
Sbjct: 179 VETAKEATEKAKETALAATEKAKDLASKAATKKKQFV 215

May be involved in hematopoiesis during avian development.

Gallus gallus (taxid: 9031)

>sp|Q32KN9|PRLD1_BOVIN PRELI domain-containing protein 1, mitochondrial OS=Bos taurus GN=PRELID1 PE=2 SV=1

 Score =  171 bits (432), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 77/166 (46%), Positives = 112/166 (67%), Gaps = 4/166 (2%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTN 104
           MVKYF  ++V R +W+QV   +W+RYPNP S HVL+EDIV + +T D KL ++R+LTKTN
Sbjct: 1   MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTSDQKLLSRRLLTKTN 60

Query: 105 NAPKWGERFIKTN---KIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDEN 161
             P+W ER    N    + I+E+SI DP+ +T+TT+T NI +  +M V E+  Y+V+ +N
Sbjct: 61  RMPRWAERLFPANVAHSVYILEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYRVNSDN 120

Query: 162 ENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFIL 207
             WT  +R  W+ S ++G S A+Q+FGL R+K N+ K   GF +IL
Sbjct: 121 SGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYIL 166

May be important for the development of vital and immunocompetent organs.

Bos taurus (taxid: 9913)

>sp|Q8R107|PRLD1_MOUSE PRELI domain-containing protein 1, mitochondrial OS=Mus musculus GN=Prelid1 PE=2 SV=1

 Score =  169 bits (428), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 77/166 (46%), Positives = 111/166 (66%), Gaps = 4/166 (2%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTN 104
           MVKYF  ++V R +W+QV   +W+RYPNP S HVL+EDIV + +T D KL ++R+LTKTN
Sbjct: 1   MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTN 60

Query: 105 NAPKWGERFIKTN---KIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDEN 161
             P+W ER    N    + I+E+SI DP+ +T+TT+T NI +  +M V E+  Y V+ +N
Sbjct: 61  RMPRWAERLFPANVAHSVYILEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDN 120

Query: 162 ENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFIL 207
             WT  +R  W+ S ++G S A+Q+FGL R+K N+ K   GF +IL
Sbjct: 121 SGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYIL 166

May be important for the development of vital and immunocompetent organs.

Mus musculus (taxid: 10090)

>sp|Q9Y255|PRLD1_HUMAN PRELI domain-containing protein 1, mitochondrial OS=Homo sapiens GN=PRELID1 PE=2 SV=1

 Score =  168 bits (426), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 76/166 (45%), Positives = 111/166 (66%), Gaps = 4/166 (2%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTN 104
           MVKYF  ++V R +W+QV   +W+RYPNP S HVL+EDIV + +T D KL ++R+LTKTN
Sbjct: 1   MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTN 60

Query: 105 NAPKWGERFIKTN---KIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDEN 161
             P+W ER    N    + ++E+SI DP+ +T+TT+T NI +  +M V E+  Y V+ +N
Sbjct: 61  RMPRWAERLFPANVAHSVYVLEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDN 120

Query: 162 ENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFIL 207
             WT  +R  W+ S ++G S A+Q+FGL R+K N+ K   GF +IL
Sbjct: 121 SGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYIL 166

May be important for the development of vital and immunocompetent organs.

Homo sapiens (taxid: 9606)

>sp|Q9UT07|UPS1_SCHPO Protein ups1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAP8A3.10 PE=3 SV=1

 Score = 94.0 bits (232), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 89/168 (52%), Gaps = 2/168 (1%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITD-NKLFTKRILTKTN 104
           M     +KT    +W  V+  +  RYPNP S HV+S D++++ + D  +L+T+R+L K  
Sbjct: 1   MTAICTDKTELNASWNTVSSAWLTRYPNPYSLHVVSADVLERYVDDEGRLYTERLLVKQG 60

Query: 105 NAPKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENW 164
             P+W    +  NK  I+E S+ DP ++ L + T N+ +  ++ VIE   +  S EN + 
Sbjct: 61  RLPRWASDLLNVNKSYILERSVIDPSKQELKSETFNLDHVKILRVIEYSRFIQSSENCSK 120

Query: 165 TLAKR-SVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMF 211
           T+    + ++    +G    +QK+ L+R+++ +     G  +++   F
Sbjct: 121 TIVDTIAKFVSPLRFGLGRRVQKYSLKRFQEQLSSSRRGLLYVIQQKF 168

Required for maintenance of normal mitochondrial morphology as well as PCP1-dependent processing of MGM1.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q54G07|SLMO_DICDI Protein slowmo homolog OS=Dictyostelium discoideum GN=slmo PE=3 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 2/148 (1%)

Query: 53  KTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRI--TDNKLFTKRILTKTNNAPKWG 110
           K  ++  W   +   +R+YP+PE   +LS DI+ + I  T   L   +++    N P W 
Sbjct: 8   KHTYKHLWSDASTASFRKYPSPERPDILSIDILSKEIDPTTGVLKCTKLIICKGNTPSWL 67

Query: 111 ERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWTLAKRS 170
           +  + + +    EE+  DPK K +T  T+N+ +T+++ V E   Y+   +NE WTL  + 
Sbjct: 68  KSILGSGECLFYEETTVDPKNKIMTLKTKNLNFTNILGVDEVCTYEQHPDNEEWTLFTQE 127

Query: 171 VWIDSKMYGFSLAIQKFGLERYKKNILK 198
             + S ++G +  ++ F L+R+  N  K
Sbjct: 128 ATVTSSIFGVARKMEAFCLDRFVANAGK 155

Dictyostelium discoideum (taxid: 44689)

>sp|Q05776|UPS1_YEAST Protein UPS1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPS1 PE=1 SV=1

 Score = 79.0 bits (193), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 10/171 (5%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTN 104
           MV   ++  +F  ++  V++ ++ RYPNP S HVLS D + + +  +  L T R+L K+ 
Sbjct: 1   MVLLHKSTHIFPTDFASVSRAFFNRYPNPYSPHVLSIDTISRNVDQEGNLRTTRLLKKSG 60

Query: 105 NAPKWGERFIK-TNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENEN 163
             P W + F++   +  I+E S+ +P   T+ TYTRN+ +T +M V E   Y+  D   +
Sbjct: 61  KLPTWVKPFLRGITETWIIEVSVVNPANSTMKTYTRNLDHTGIMKVEEYTTYQF-DSATS 119

Query: 164 WTLAKRSVWIDSKMYGFSLAI----QKFGLERYKKNILKMTNGFNFILNAM 210
            T+A   V   S   GF++ I    + +   ++ +N+ K   G  F++  +
Sbjct: 120 STIADSRVKFSS---GFNMGIKSKVEDWSRTKFDENVKKSRMGMAFVIQKL 167

Required for maintenance of normal mitochondrial morphology as well as PCP1-dependent processing of MGM1. With UPS2, controls the level of cardiolipin in mitochondria. Cardiolipin is a unique phospholipid with four fatty acid chains and is present mainly in the mitochondrial inner membrane where it stabilizes the electron transport chain supercomplex between complexes III and IV through direct interaction of their subunits.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q04006|UPS3_YEAST Protein UPS3, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPS3 PE=1 SV=1

 Score = 77.8 bits (190), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 97/184 (52%), Gaps = 16/184 (8%)

Query: 47  VKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNK--LFTKRILTKTN 104
           +K F+    F + WE+V    W +YPN  STHV++ D++ + + ++   L T+R++T   
Sbjct: 1   MKSFQKSYEFDYPWEKVTTANWMKYPNKISTHVIAVDVLRRELKEHGDVLLTERLITIRQ 60

Query: 105 NAPKWGERFI-KTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDEN-E 162
           N P W    +  TN   + E S  D ++++LT  + N+ +  ++   E V Y    +N  
Sbjct: 61  NTPHWMSILVGNTNLAYVREVSTVDRRDRSLTMRSCNMTFPHILKCYETVRYVPHPKNPS 120

Query: 163 NWTLAKRSVWIDSKMYG------FSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQ 216
           N TL K+    D+K         FS  ++ +G++R+  N +K   GF+ IL AMF N + 
Sbjct: 121 NVTLFKQ----DAKFLSGVPTKTFSEKVENWGVKRFSDNAVKGKVGFDSIL-AMF-NDIW 174

Query: 217 QNAN 220
           +NAN
Sbjct: 175 KNAN 178

Required for mitochondrial morphology. With UPS1 and UPS2, controls phospholipid metabolism in the mitochondrial intermembrane space.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P35200|UPS2_YEAST Protein UPS2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPS2 PE=1 SV=1

 Score = 75.9 bits (185), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 10/175 (5%)

Query: 47  VKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNK--LFTKRILTKTN 104
           +K F+N   F + W+QV    W++YPN  STHV++ D++ + + D    L T+R++T   
Sbjct: 1   MKLFQNSYDFNYPWDQVTAANWKKYPNEISTHVIAVDVLRRELKDQGKVLVTERLITVKQ 60

Query: 105 NAPKWGERFI-KTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVS-DENE 162
             PKW    +  TN   + E S+ D  +K+LT  + N+   +++ V E V Y    D++ 
Sbjct: 61  GVPKWIMMMLGGTNMSHVREVSVVDLNKKSLTMRSCNLTMCNLLKVYETVTYSPHPDDSA 120

Query: 163 NWTLAKRSVWIDSKMYG----FSLAIQKFGLERYKKNILKMTNGFNFILNAMFPN 213
           N TL ++   I +  YG        ++ + ++R+ +N  K   GF+ +L     N
Sbjct: 121 NKTLFQQEAQITA--YGSIRKLCNKMEDWSVQRFCENAKKGKMGFDAVLQVFSEN 173

Required for mitochondrial cristae morphogenesis and MGM1-processing. Controls the stability of mitochondrial phosphatidylethanolamine (PE). With UPS1, controls the level of cardiolipin in mitochondria. Cardiolipin is a unique phospholipid with four fatty acid chains and is present mainly in the mitochondrial inner membrane where it stabilizes the electron transport chain supercomplex between complexes III and IV through direct interaction of their subunits.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	264
345493320	236	PREDICTED: protein preli-like isoform 1	0.825	0.923	0.565	6e-69
332017132	243	Protein preli-like protein [Acromyrmex e	0.799	0.868	0.541	7e-65
307175612	243	Protein preli-like [Camponotus floridanu	0.647	0.703	0.625	3e-63
380016178	231	PREDICTED: protein preli-like [Apis flor	0.791	0.904	0.530	3e-63
66524951	231	PREDICTED: protein preli-like isoform 1	0.791	0.904	0.522	1e-62
307214894	244	Protein preli-like [Harpegnathos saltato	0.776	0.840	0.538	2e-62
322784941	247	hypothetical protein SINV_05660 [Solenop	0.795	0.850	0.493	4e-62
383861005	232	PREDICTED: protein preli-like [Megachile	0.670	0.762	0.617	5e-62
242003076	217	conserved hypothetical protein [Pediculu	0.75	0.912	0.565	1e-61
340725708	238	PREDICTED: protein preli-like [Bombus te	0.803	0.890	0.539	4e-58

>gi|345493320|ref|XP_003427044.1| PREDICTED: protein preli-like isoform 1 [Nasonia vitripennis] gi|345493322|ref|XP_003427045.1| PREDICTED: protein preli-like isoform 2 [Nasonia vitripennis]

 Score =  266 bits (680), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 134/237 (56%), Positives = 169/237 (71%), Gaps = 19/237 (8%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNN 105
           MVKYFEN TVF+F+W+QVAQG+WRRYPNP STHV+SED + + + D KL+TKR+LTKTN 
Sbjct: 1   MVKYFENSTVFQFSWDQVAQGFWRRYPNPNSTHVISEDTISRELKDGKLYTKRLLTKTNR 60

Query: 106 APKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWT 165
            PKWGERFI  N +KIVEESI DPK+K LTTYTRN+GYT VMSV+EKV YKVSDEN  WT
Sbjct: 61  VPKWGERFISKNNVKIVEESIVDPKKKILTTYTRNLGYTKVMSVVEKVVYKVSDENPQWT 120

Query: 166 LAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQ-QNANLAST 224
            AKRS WI+S ++GFS AIQ FGL+R+KKN  KM+NGFN++L  MFP+  +  N NLA  
Sbjct: 121 EAKRSAWIESSVFGFSRAIQAFGLDRFKKNCTKMSNGFNYVLAHMFPSTARFMNPNLAQM 180

Query: 225 -------------MSSTNQNFAIN----PDKLKEKAKKVTSDFATKSSKLLNVPNPS 264
                        ++   ++F  +     +K+K+ AKK T D A + +  + V N S
Sbjct: 181 GFSERVDEPSMIRLTHAAEDFQHSLHDKAEKMKDAAKKAT-DLAKQKAGPIYVTNQS 236

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332017132|gb|EGI57931.1| Protein preli-like protein [Acromyrmex echinatior]

 Score =  253 bits (645), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 123/227 (54%), Positives = 164/227 (72%), Gaps = 16/227 (7%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNN 105
           MVKY+EN T+F+F+W QV +G+++RYPNP S+HVL+ED + + I + KL++KR+LTKTN 
Sbjct: 1   MVKYYENITIFKFDWTQVVRGFFQRYPNPHSSHVLTEDTISREIKNGKLYSKRLLTKTNR 60

Query: 106 APKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWT 165
            PKWGERFI  N +KIVEESI DP+ KTLTTYTRN+GYT VMS++EKV Y++SDEN +WT
Sbjct: 61  VPKWGERFISKNIVKIVEESIVDPEAKTLTTYTRNLGYTKVMSIVEKVVYQISDENPDWT 120

Query: 166 LAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQ-QNANLAST 224
           +AKRS WIDS+++GFS AIQ FGL+R+KKN  KM+ GFN++L  MFP+  Q  N  L+ T
Sbjct: 121 IAKRSAWIDSQVFGFSRAIQAFGLDRFKKNCAKMSEGFNYVLANMFPHTTQFLNPKLSQT 180

Query: 225 MSSTNQNFAINPD--------------KLKEKAKKVTSDFATKSSKL 257
             S   + +I  D               L+ KA+KV  D A K++ L
Sbjct: 181 SFSVQASHSIADDGVMIKPSLAEDLQHSLQGKAEKV-KDAAKKATDL 226

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307175612|gb|EFN65521.1| Protein preli-like [Camponotus floridanus]

 Score =  247 bits (631), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 107/171 (62%), Positives = 140/171 (81%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNN 105
           MVKY+EN T+F F+W QV +G+++RYPNP S+HVL+ED + + + + KL++KR+LTKTN 
Sbjct: 1   MVKYYENITIFHFDWSQVVRGFFQRYPNPHSSHVLTEDTISREVKNGKLYSKRLLTKTNR 60

Query: 106 APKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWT 165
            PKWGERFI  N +KIVEESI DP+ KTLTTYT+N+GYT VMS++EKV Y+VSDEN  WT
Sbjct: 61  LPKWGERFISKNVVKIVEESIVDPEAKTLTTYTKNLGYTKVMSIVEKVVYQVSDENPEWT 120

Query: 166 LAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQ 216
           +AKRS WIDS+++GFS AIQ FGL+R+KKN  KM+ GFN++L  MFP+  Q
Sbjct: 121 IAKRSAWIDSQVFGFSRAIQAFGLDRFKKNCTKMSEGFNYVLTNMFPHTAQ 171

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380016178|ref|XP_003692065.1| PREDICTED: protein preli-like [Apis florea]

 Score =  247 bits (631), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 120/226 (53%), Positives = 160/226 (70%), Gaps = 17/226 (7%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNN 105
           MVKY+E+ T+F+FNW QVA G+W+RYPNP S+HVL+ED + +++ +  L+T R+LTKTN 
Sbjct: 1   MVKYYESSTIFQFNWNQVAYGFWQRYPNPNSSHVLTEDTISRKVKNGILYTTRLLTKTNR 60

Query: 106 APKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWT 165
            PKWGERF+  N +KI+EESI DPK KTLTTYTRN+GYT VMS++EKV YKV +EN NWT
Sbjct: 61  VPKWGERFVSKNIVKIIEESIVDPKTKTLTTYTRNLGYTKVMSIVEKVVYKVCEENSNWT 120

Query: 166 LAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANLASTM 225
           +AKRS WIDS+++GFS AIQ FGL+R+KKN   M NGFN++L  +FP+  Q      S M
Sbjct: 121 VAKRSAWIDSQVFGFSRAIQAFGLDRFKKNCTLMYNGFNYVLAHLFPHTAQHMNPSLSQM 180

Query: 226 ------------SSTNQNFAIN----PDKLKEKAKKVTSDFATKSS 255
                       +S  ++F  +     +K+K+ AKK T D A K +
Sbjct: 181 GFAHLVDEFPGKTSLAEDFQHSLQGKAEKVKDAAKKAT-DLAKKKT 225

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66524951|ref|XP_392055.2| PREDICTED: protein preli-like isoform 1 [Apis mellifera]

 Score =  245 bits (626), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 118/226 (52%), Positives = 158/226 (69%), Gaps = 17/226 (7%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNN 105
           MVKY+E+ T+F+FNW QVA G+W+RYPNP S+HVL+ED + +++ +  L++ R+LTKTN 
Sbjct: 1   MVKYYESSTIFQFNWNQVAYGFWQRYPNPNSSHVLTEDTISRKVKNGILYSTRLLTKTNR 60

Query: 106 APKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWT 165
            PKWGERF+  N +KI+EESI DPK KTLTTYTRN+GYT VMS++EKV YKV +EN NWT
Sbjct: 61  VPKWGERFVSKNIVKIIEESIVDPKTKTLTTYTRNLGYTKVMSIVEKVVYKVCEENSNWT 120

Query: 166 LAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQ-QNANLA-- 222
           +AKRS WIDS+++GFS AIQ FGL+R+KKN   M NGFN++L  +FP+  Q  N +L+  
Sbjct: 121 VAKRSAWIDSQVFGFSRAIQAFGLDRFKKNCTLMYNGFNYVLAHLFPHTAQYMNPSLSQM 180

Query: 223 -------------STMSSTNQNFAINPDKLKEKAKKVTSDFATKSS 255
                        S       +     +K+K+ AKK T D A K +
Sbjct: 181 GFAHLVEEFPGKTSLAEDFQHSLQGKAEKVKDAAKKAT-DLAKKKA 225

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307214894|gb|EFN89762.1| Protein preli-like [Harpegnathos saltator]

 Score =  245 bits (625), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 111/206 (53%), Positives = 150/206 (72%), Gaps = 1/206 (0%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNN 105
           MVKY+EN   F+F+W QVA+G+++RYPNP S+HVLSED + + + + KL++KR+LTKTN 
Sbjct: 1   MVKYYENTMTFQFDWTQVARGFFQRYPNPHSSHVLSEDTISREVVNGKLYSKRLLTKTNR 60

Query: 106 APKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWT 165
            PKWGER +  N +KIVEESI DP+ KTLTTYTRN+GYT VMS++EKV Y++S+EN  WT
Sbjct: 61  IPKWGERLVSKNIVKIVEESIVDPETKTLTTYTRNLGYTKVMSIVEKVVYQISEENPEWT 120

Query: 166 LAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQ-QNANLAST 224
           +AKRS WIDS+++G S AIQ FGL+R+KKN +KM+ GFN++L  MFP   Q  N  L  T
Sbjct: 121 VAKRSAWIDSQVFGLSRAIQAFGLDRFKKNCVKMSEGFNYVLTNMFPQRAQFINPQLIQT 180

Query: 225 MSSTNQNFAINPDKLKEKAKKVTSDF 250
             S     +I  D + +  + +  D 
Sbjct: 181 SFSMQPGHSIVDDGITQTKQSLAGDL 206

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322784941|gb|EFZ11712.1| hypothetical protein SINV_05660 [Solenopsis invicta]

 Score =  244 bits (622), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 117/237 (49%), Positives = 166/237 (70%), Gaps = 27/237 (11%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNN 105
           MVKY+EN T+F+F+W QV +G+++RYPNP S+HVL+ED + + +T  KL++KR+LTKTN 
Sbjct: 1   MVKYYENTTIFKFDWTQVVRGFFQRYPNPHSSHVLTEDTISREVTSGKLYSKRLLTKTNR 60

Query: 106 APKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVM------SVIEKVEYKVSD 159
            PKWGERFI  N +KIVEESI DP+EKTLTTYTRN+GYT VM      S++EKV Y++S+
Sbjct: 61  VPKWGERFISKNIVKIVEESIVDPEEKTLTTYTRNLGYTKVMRYYFLQSIVEKVVYQISE 120

Query: 160 ENENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMF------PN 213
           EN  WT+AKRS WIDS+++GFS AIQ FGL+R+KKN +KM+ GFN++L  MF      P 
Sbjct: 121 ENPEWTVAKRSAWIDSQVFGFSRAIQAFGLDRFKKNCVKMSEGFNYVLANMFPPQFLNPT 180

Query: 214 VLQQNANLASTMSSTNQNFAINP--------------DKLKEKAKKVTSDFATKSSK 256
           + Q + ++ +  ++ + +    P              +K+K+ AKK T D A + ++
Sbjct: 181 LPQTSFSMQTGHTAADDSITTKPSLAEDLQHSLQGRAEKMKDAAKKAT-DLAKEKAR 236

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383861005|ref|XP_003705977.1| PREDICTED: protein preli-like [Megachile rotundata]

 Score =  243 bits (621), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 110/178 (61%), Positives = 140/178 (78%), Gaps = 1/178 (0%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNN 105
           MVK++E+  +F+FNW QVAQ +W+RYPNP S+HVL+ED + +R+ +  L+T R+LTKT+ 
Sbjct: 1   MVKHYEDSVIFQFNWNQVAQAFWQRYPNPNSSHVLTEDTISRRVRNGILYTTRLLTKTSG 60

Query: 106 APKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWT 165
            PKWGERFIK N +KIVEES  D K KTLTTYTRN+GYT+VMS++EKV YKVSD+N NWT
Sbjct: 61  VPKWGERFIKKNVVKIVEESTVDMKTKTLTTYTRNLGYTTVMSIVEKVVYKVSDDNPNWT 120

Query: 166 LAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQ-NANLA 222
           +AKRS WIDS+ +GFS A+Q FGLER+KKN   M  GFN++L  MFP+  Q  N  LA
Sbjct: 121 VAKRSAWIDSQAFGFSRALQAFGLERFKKNCKVMYAGFNYVLAHMFPHTAQHMNPTLA 178

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242003076|ref|XP_002422602.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212505403|gb|EEB09864.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 117/207 (56%), Positives = 149/207 (71%), Gaps = 9/207 (4%)

Query: 47  VKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNNA 106
           +KY+EN TVF + WEQVAQG+W+RYPNP+S+HVL+ED + + + D KL++KRILTKTN  
Sbjct: 1   MKYYENSTVFHYTWEQVAQGFWKRYPNPQSSHVLTEDTIQREVKDGKLYSKRILTKTNRV 60

Query: 107 PKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSV--MSVIEKVEYKVSDENENW 164
           PKWGERFI T  +KI+EESI DP EK L TYTRNIG   +  MSV+EKV YK S EN NW
Sbjct: 61  PKWGERFISTRVVKIIEESIVDPNEKLLVTYTRNIGLARIMEMSVVEKVTYKTSQENSNW 120

Query: 165 TLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANLAST 224
           T+A RS WIDS+++GF  AI  FGLER+++N  KM  GFN++L+ MFP    QNA+  + 
Sbjct: 121 TVAYRSAWIDSQVFGFRKAIIAFGLERFRRNCQKMITGFNYVLSGMFP----QNASTVTI 176

Query: 225 MSSTNQNFAINPDKLKEKAKKVTSDFA 251
               N N A   +KL++ A K  SD A
Sbjct: 177 --EENSNIASKTEKLRDVA-KTASDLA 200

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725708|ref|XP_003401208.1| PREDICTED: protein preli-like [Bombus terrestris]

 Score =  230 bits (587), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 124/230 (53%), Positives = 162/230 (70%), Gaps = 18/230 (7%)

Query: 46  MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNN 105
           MVKY+E+ T+F+FNW+QVA+G+W+RYPNP STHVL+ED V +++ D  L+T R+LTKTN 
Sbjct: 1   MVKYYESNTIFQFNWDQVARGFWQRYPNPNSTHVLTEDTVSRKVKDGMLYTTRLLTKTNR 60

Query: 106 APKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWT 165
            PKWGERFI  + +KIVEE+I DPK KTLTTYTRN+GYT VM V+EKV YKV +EN NWT
Sbjct: 61  VPKWGERFISKSVVKIVEETIVDPKTKTLTTYTRNLGYTKVMVVVEKVVYKVCEENPNWT 120

Query: 166 LAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQ-QNANL--- 221
           +AKRS WIDS+++GF  AIQ FGL+R+KKN   M NGFN++L  MFP+  Q  N  L   
Sbjct: 121 VAKRSAWIDSQVFGFGRAIQAFGLDRFKKNCTLMYNGFNYVLAHMFPHTAQYMNPTLSQM 180

Query: 222 ---------ASTMSSTNQNFAIN----PDKLKEKAKKVTSDFATKSSKLL 258
                    A   +S  ++F  +     +K+K+ AKK T D A K +  +
Sbjct: 181 GFAHLVDEGAGARTSLAEDFQHSLQGRAEKVKDAAKKAT-DLAKKKAGTI 229

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	264
FB|FBgn0033413	236	prel "preli-like" [Drosophila	0.787	0.881	0.434	1.3e-43
UNIPROTKB|Q90673	215	PRELID1 "PRELI domain-containi	0.799	0.981	0.414	9.3e-43
ZFIN|ZDB-GENE-040426-1341	210	prelid1a "PRELI domain contain	0.768	0.966	0.443	9.3e-43
UNIPROTKB|F1S3C3	219	PRELID1 "Uncharacterized prote	0.791	0.954	0.404	1.1e-41
UNIPROTKB|Q32KN9	219	PRELID1 "PRELI domain-containi	0.791	0.954	0.404	1.4e-41
UNIPROTKB|E2R8K9	219	PRELID1 "Uncharacterized prote	0.791	0.954	0.404	2.8e-41
UNIPROTKB|Q9Y255	219	PRELID1 "PRELI domain-containi	0.791	0.954	0.4	3.6e-41
MGI|MGI:1913744	217	Prelid1 "PRELI domain containi	0.791	0.963	0.4	5.9e-41
RGD|1308082	217	Prelid1 "PRELI domain containi	0.791	0.963	0.4	5.9e-41
UNIPROTKB|D6RD25	208	PRELID1 "PRELI domain-containi	0.75	0.951	0.4	4.2e-40

FB|FBgn0033413 prel "preli-like" [Drosophila melanogaster (taxid:7227)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 99/228 (43%), Positives = 144/228 (63%)

Query:    53 KTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTKRILTKTNNAPKWGER 112
             +TVF ++W  V   YW RYPNP STHVL+ED + + + D KLF++R+L+KTN  PKWG R
Sbjct:    11 ETVFDYSWMNVVVAYWNRYPNPSSTHVLTEDTIQREVRDGKLFSRRLLSKTNPVPKWGAR 70

Query:   113 FIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWTLAKRSVW 172
             F     +KIVE+S+ DP +KT TT+TRN+G T +M V E V Y  S++ +  TLA R  +
Sbjct:    71 FYNNVPVKIVEDSVLDPVKKTFTTFTRNLGMTKIMKVDEIVVY--SEQKDGSTLAVRRAY 128

Query:   173 IDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVL-----QQNA-------- 219
             I S+++GFS AI+ FG+ER+K N  K +NGFN++L  MFP+ L      Q+A        
Sbjct:   129 ISSQVFGFSRAIRAFGIERFKANGNKASNGFNYVLRRMFPDSLVGGGHHQHAVTTTSPAG 188

Query:   220 NL-ASTMSSTNQNFAINPDKLKEKAKKVTSDF----ATKSSKLLNVPN 262
              L A+T++ +  N ++N     + A KV  +F    A+K ++L +V N
Sbjct:   189 ELPATTITVSTTNGSLNNQGALKSAAKVGYEFFKSHASKIAQLFSVKN 236

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0070584 "mitochondrion morphogenesis" evidence=IMP

GO:0030061 "mitochondrial crista" evidence=IDA

GO:0048813 "dendrite morphogenesis" evidence=IMP

UNIPROTKB|Q90673 PRELID1 "PRELI domain-containing protein 1, mitochondrial" [Gallus gallus (taxid:9031)]

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 90/217 (41%), Positives = 129/217 (59%)

Query:    46 MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTN 104
             M KY  +  V +  W+QV   +W+RYPNP S HVL+EDIV + +T D+KL ++R+LTKTN
Sbjct:     1 MGKYCASLGVLKGPWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTADHKLLSRRLLTKTN 60

Query:   105 NAPKWGERFIKTN---KIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDEN 161
               P+W ERF   N    + IVE+SI DPK +T+TT+T NI +  +M+V E+  Y+V+ EN
Sbjct:    61 RMPRWAERFFPANVAHNVYIVEDSIVDPKNRTMTTFTWNINHARLMAVEERCVYRVNPEN 120

Query:   162 ENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANL 221
              +WT  KR  W+ S ++G S A+Q+FGL R+K N+ K T GF ++L  M       +  L
Sbjct:   121 SSWTEVKREAWVSSSLFGVSRAVQEFGLARFKSNVTKSTKGFEYVLARMQGEA--PSKTL 178

Query:   222 ASTMSSTNQNFAINPDKLKEKAKKVTSDFATKSSKLL 258
               T     +          EKAK + S  ATK  + +
Sbjct:   179 VETAKEATEKAKETALAATEKAKDLASKAATKKKQFV 215

GO:0005739 "mitochondrion" evidence=ISS

ZFIN|ZDB-GENE-040426-1341 prelid1a "PRELI domain containing 1a" [Danio rerio (taxid:7955)]

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 94/212 (44%), Positives = 132/212 (62%)

Query:    46 MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTN 104
             MVKYF      + +W+QV+  +W+RYPNP S HVL+EDI+ + +T DN L ++R+LTKT+
Sbjct:     1 MVKYFSCVGFLKSSWDQVSSAFWQRYPNPYSNHVLTEDIIFREVTPDNCLKSRRLLTKTS 60

Query:   105 NAPKWGERFIKTN---KIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDEN 161
              AP+W E+F+  +   K  I+E+S+ DP+ KTLTT T NI +  VMS+ E+  YKV+ EN
Sbjct:    61 RAPRWAEKFLPAHMAQKAYIIEDSVVDPQGKTLTTLTWNISHARVMSIEERCVYKVNPEN 120

Query:   162 ENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANL 221
              +WT  +R  WI SK+YG S AIQ+FGL R+K N+ K   GF +IL  M   +      L
Sbjct:   121 SSWTEIERQAWISSKLYGLSRAIQEFGLARFKSNVTKTMKGFEYILAKMQGEM--PTRTL 178

Query:   222 ASTMSSTNQNFAINPDKLKEKAKKVTSDFATK 253
             A T +   +  A+     KEKAK + S    K
Sbjct:   179 AETATVKARETAL---AAKEKAKDLASQAQKK 207

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|F1S3C3 PRELID1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 87/215 (40%), Positives = 128/215 (59%)

Query:    46 MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTN 104
             MVKYF  ++V R +W+QV   +W+RYPNP S HVL+EDIV + +T D KL ++R+LTKTN
Sbjct:     1 MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTN 60

Query:   105 NAPKWGERFIKTN---KIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDEN 161
               P+W ER    N    + I+E+SI DP+ +T+TT+T NI +  +M V E+  Y+V+ +N
Sbjct:    61 RMPRWAERLFPANVAHSVYILEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYRVNSDN 120

Query:   162 ENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANL 221
              +WT  +R  W+ S ++G S A+Q+FGL R+K N+ K   GF +IL  +      +   L
Sbjct:   121 NSWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKLQGEAPPKT--L 178

Query:   222 ASTMSSTNQNFAINPDKLKEKAKKVTSDFATKSSK 256
               T     +          EKAK + S  ATK  +
Sbjct:   179 VETAKEAKEKAKETALAATEKAKDLASKAATKKQQ 213

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q32KN9 PRELID1 "PRELI domain-containing protein 1, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 87/215 (40%), Positives = 127/215 (59%)

Query:    46 MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTN 104
             MVKYF  ++V R +W+QV   +W+RYPNP S HVL+EDIV + +T D KL ++R+LTKTN
Sbjct:     1 MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTSDQKLLSRRLLTKTN 60

Query:   105 NAPKWGERFIKTN---KIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDEN 161
               P+W ER    N    + I+E+SI DP+ +T+TT+T NI +  +M V E+  Y+V+ +N
Sbjct:    61 RMPRWAERLFPANVAHSVYILEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYRVNSDN 120

Query:   162 ENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANL 221
               WT  +R  W+ S ++G S A+Q+FGL R+K N+ K   GF +IL  +      +   L
Sbjct:   121 SGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKLQGEAPPKT--L 178

Query:   222 ASTMSSTNQNFAINPDKLKEKAKKVTSDFATKSSK 256
               T     +          EKAK + S  ATK  +
Sbjct:   179 VETAKEAKEKAKETALAATEKAKDLASKAATKKQQ 213

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|E2R8K9 PRELID1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 87/215 (40%), Positives = 126/215 (58%)

Query:    46 MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTN 104
             MVKYF  ++V R +W+QV   +W+RYPNP S HVL+EDIV + +T D KL ++R+LTKTN
Sbjct:     1 MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTN 60

Query:   105 NAPKWGERFIKTN---KIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDEN 161
               P+W ER    N    + I+E+SI DP+ +T+TT+T NI +  +M V E+  Y V+ +N
Sbjct:    61 RMPRWAERLFPANVAHSVYILEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDN 120

Query:   162 ENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANL 221
               WT  +R  W+ S ++G S A+Q+FGL R+K N+ K   GF +IL  +       +  L
Sbjct:   121 SGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKLQGEA--PSKTL 178

Query:   222 ASTMSSTNQNFAINPDKLKEKAKKVTSDFATKSSK 256
               T     +          EKAK + S  ATK  +
Sbjct:   179 VETAKEAKEKAKETALAATEKAKDLASKAATKQQQ 213

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q9Y255 PRELID1 "PRELI domain-containing protein 1, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 86/215 (40%), Positives = 126/215 (58%)

Query:    46 MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTN 104
             MVKYF  ++V R +W+QV   +W+RYPNP S HVL+EDIV + +T D KL ++R+LTKTN
Sbjct:     1 MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTN 60

Query:   105 NAPKWGERFIKTN---KIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDEN 161
               P+W ER    N    + ++E+SI DP+ +T+TT+T NI +  +M V E+  Y V+ +N
Sbjct:    61 RMPRWAERLFPANVAHSVYVLEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDN 120

Query:   162 ENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANL 221
               WT  +R  W+ S ++G S A+Q+FGL R+K N+ K   GF +IL  +       +  L
Sbjct:   121 SGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKLQGEA--PSKTL 178

Query:   222 ASTMSSTNQNFAINPDKLKEKAKKVTSDFATKSSK 256
               T     +          EKAK + S  ATK  +
Sbjct:   179 VETAKEAKEKAKETALAATEKAKDLASKAATKKQQ 213

GO:0005739 "mitochondrion" evidence=ISS;IDA

GO:0006955 "immune response" evidence=TAS

GO:0007275 "multicellular organismal development" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

MGI|MGI:1913744 Prelid1 "PRELI domain containing 1" [Mus musculus (taxid:10090)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 86/215 (40%), Positives = 126/215 (58%)

Query:    46 MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTN 104
             MVKYF  ++V R +W+QV   +W+RYPNP S HVL+EDIV + +T D KL ++R+LTKTN
Sbjct:     1 MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTN 60

Query:   105 NAPKWGERFIKTN---KIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDEN 161
               P+W ER    N    + I+E+SI DP+ +T+TT+T NI +  +M V E+  Y V+ +N
Sbjct:    61 RMPRWAERLFPANVAHSVYILEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDN 120

Query:   162 ENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANL 221
               WT  +R  W+ S ++G S A+Q+FGL R+K N+ K   GF +IL  +       +  L
Sbjct:   121 SGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKLQGEA--PSKTL 178

Query:   222 ASTMSSTNQNFAINPDKLKEKAKKVTSDFATKSSK 256
               T     +          EKAK + +  ATK  +
Sbjct:   179 VETAKEAKEKAKETALAATEKAKDLANKAATKQQQ 213

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0008150 "biological_process" evidence=ND

RGD|1308082 Prelid1 "PRELI domain containing 1" [Rattus norvegicus (taxid:10116)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 86/215 (40%), Positives = 126/215 (58%)

Query:    46 MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTN 104
             MVKYF  ++V R +W+QV   +W+RYPNP S HVL+EDIV + +T D KL ++R+LTKTN
Sbjct:     1 MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTN 60

Query:   105 NAPKWGERFIKTN---KIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDEN 161
               P+W ER    N    + I+E+SI DP+ +T+TT+T NI +  +M V E+  Y V+ +N
Sbjct:    61 RMPRWAERLFPANVAHSVYILEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDN 120

Query:   162 ENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANL 221
               WT  +R  W+ S ++G S A+Q+FGL R+K N+ K   GF +IL  +       +  L
Sbjct:   121 SGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKLQGEA--PSKTL 178

Query:   222 ASTMSSTNQNFAINPDKLKEKAKKVTSDFATKSSK 256
               T     +          EKAK + +  ATK  +
Sbjct:   179 VETAKEAKEKAKETALAATEKAKDLANKAATKQQQ 213

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|D6RD25 PRELID1 "PRELI domain-containing protein 1, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 86/215 (40%), Positives = 130/215 (60%)

Query:    46 MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTN 104
             MVKYF  ++V R +W+QV   +W+RYPNP S HVL+EDIV + +T D KL ++R+LTKTN
Sbjct:     1 MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTPDQKLLSRRLLTKTN 60

Query:   105 NAPKWGERFIKTN---KIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDEN 161
               P+W ER    N    + ++E+SI DP+ +T+TT+T NI +  +M V E+  Y V+ +N
Sbjct:    61 RMPRWAERLFPANVAHSVYVLEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYCVNSDN 120

Query:   162 ENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVLQQNANL 221
               WT  +R  W+ S ++G S A+Q+FGL R+K N+ K   GF +IL  +     ++ A  
Sbjct:   121 SGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKLQAKEAKEKAK- 179

Query:   222 ASTMSSTNQNFAINPDKLKEKAKKVTSDFATKSSK 256
              + +++T            EKAK + S  ATK  +
Sbjct:   180 ETALAAT------------EKAKDLASKAATKKQQ 202

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8R107	PRLD1_MOUSE	No assigned EC number	0.4638	0.6136	0.7465	yes	N/A
Q9V579	PREL_DROME	No assigned EC number	0.4065	0.8181	0.9152	yes	N/A
Q9Y255	PRLD1_HUMAN	No assigned EC number	0.4578	0.6136	0.7397	yes	N/A
Q32KN9	PRLD1_BOVIN	No assigned EC number	0.4638	0.6136	0.7397	yes	N/A
Q90673	PRLD1_CHICK	No assigned EC number	0.4147	0.7992	0.9813	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	264
pfam04707	157	pfam04707, PRELI, PRELI-like family	1e-45

>gnl|CDD|218219 pfam04707, PRELI, PRELI-like family

 Score =  150 bits (380), Expect = 1e-45
 Identities = 58/152 (38%), Positives = 92/152 (60%), Gaps = 4/152 (2%)

Query: 61  EQVAQGYWRRYPNPESTHVLSEDIVDQRITD-NKLFTKRILTKTNNAPKWGERFIKTNK- 118
           EQV   +WRRYPNP S HV+S D++++++ D  KL T+R+LTK    P+W ++ I     
Sbjct: 1   EQVTAAFWRRYPNPYSPHVISVDVLERKVDDDGKLHTERLLTKQGRLPRWLKKLIGVADT 60

Query: 119 IKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWTLAKRSVWID--SK 176
           + ++E S+ DPK++TLT  TRN+ ++S +SV E+  Y    EN NWT   +   I     
Sbjct: 61  VYVLEVSVVDPKKRTLTLETRNLTFSSRLSVDERCTYTPHPENPNWTCFDQEASISVKGS 120

Query: 177 MYGFSLAIQKFGLERYKKNILKMTNGFNFILN 208
            +GFS  ++K+ L+R+ +N  K   G  ++L 
Sbjct: 121 FFGFSSKVEKWSLKRFSQNAKKGREGMEYVLQ 152

This family includes a conserved region found in the PRELI protein and yeast YLR168C gene MSF1 product. The function of this protein is unknown, though it is thought to be involved in intra-mitochondrial protein sorting. This region is also found in a number of other eukaryotic proteins. Length = 157

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	264
KOG3336|consensus	185		100.0
PF04707	157	PRELI: PRELI-like family; InterPro: IPR006797 Thes	100.0
KOG3337|consensus	201		100.0
KOG3336|consensus	185		99.79
PF04707	157	PRELI: PRELI-like family; InterPro: IPR006797 Thes	99.62
KOG3337|consensus	201		98.38
PF02121	254	IP_trans: Phosphatidylinositol transfer protein; I	96.56
PF10698	159	DUF2505: Protein of unknown function (DUF2505); In	95.88
cd07815	251	SRPBCC_PITP Lipid-binding SRPBCC domain of Class I	95.52
cd08889	260	SRPBCC_PITPNM1-2_like Lipid-binding SRPBCC domain	93.7
cd08890	250	SRPBCC_PITPNC1_like Lipid-binding SRPBCC domain of	92.9
cd08888	258	SRPBCC_PITPNA-B_like Lipid-binding SRPBCC domain o	90.67
KOG3668|consensus	269		86.08

>KOG3336|consensus

Probab=100.00  E-value=4e-55  Score=370.92  Aligned_cols=176  Identities=29%  Similarity=0.555  Sum_probs=168.3

Q ss_pred             eeEEecCeeeeecceeeeecccccCCCCCCCccceeeEEEeEee-CCeEEEEEeeecccCCChhhHhhhcCcee-EEEEE
Q psy2572          47 VKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTNNAPKWGERFIKTNKI-KIVEE  124 (264)
Q Consensus        47 ~k~~~~~~~~~~~we~V~~a~~~KYPnP~~~hV~s~DVlersV~-dg~L~t~RLi~~~~~lP~w~~kl~g~~~~-~i~E~  124 (264)
                      ||.|.++|+|+||||+|++|.|+|||||+.+||+.+|||+|.++ .|+|||+|||+..+.+|+|+.+|+|...+ |+.|.
T Consensus         1 MKi~~seh~F~hPwE~Vt~A~w~KyPnp~~~hVi~VDvl~R~l~~~GkL~TeRlit~~~~~P~w~~~LiG~a~~~yv~E~   80 (185)
T KOG3336|consen    1 MKIFQSEHIFDHPWETVTAAAWRKYPNPINTHVIGVDVLDRKLDDSGKLHTERLITIHQGLPSWIHKLIGGANTCYVREV   80 (185)
T ss_pred             CccccccccccCcHHHHHHHHHHhCCCCCCCceEEEeeeeeeeccCceEEEeeeeeeccCCcHHHHHHhCcccceEEEEE
Confidence            68899999999999999999999999999999999999999999 69999999999999999999999998765 79999


Q ss_pred             eeeeCCCCeEEEEEEeccccceEEEEEEEEEEecCCCCCeeEEEEEEEEEEee--ecHHHHHHHHHHHHHHHHHHHHHHH
Q psy2572         125 SICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSDENENWTLAKRSVWIDSKM--YGFSLAIQKFGLERYKKNILKMTNG  202 (264)
Q Consensus       125 S~VDp~~rtm~~~T~Nls~~~~~~V~E~~~Y~~~p~np~~T~~~q~a~I~s~~--~g~~~~iE~~~~~rf~~na~Kgr~g  202 (264)
                      |+|||+.|+|++.|+||+|+++++|+|+++|.|||+||+||+|+|+|.|++.+  ..|+.++|+|++++|.+||.|||+|
T Consensus        81 SvVD~~~ksm~L~t~Nltf~~~l~vdE~l~Y~PhP~dpskTv~~QEa~it~~~~~~~ls~~~E~~~~s~fs~NA~KGreg  160 (185)
T KOG3336|consen   81 SVVDPKRKSMTLKTCNLTFSDFLSVDERLTYSPHPEDPSKTVLKQEAIITIKGPLVSLSEYVEQWSASRFSQNASKGREG  160 (185)
T ss_pred             EEEcCccceEEEEecccccccceEeeeEEEecCCCCCcccceeeeeeEEEEecchhhHHHHHHHHHHHHHhhcccccHHH
Confidence            99999999999999999999999999999999999999999999999999987  5799999999999999999999999


Q ss_pred             HHHHHHHhCCCchhhhhhhc
Q psy2572         203 FNFILNAMFPNVLQQNANLA  222 (264)
Q Consensus       203 ~e~vl~~l~~e~~~~~~~~~  222 (264)
                      |||||+.+..|.+.++..++
T Consensus       161 ~e~Vl~~~n~e~~~i~~~~s  180 (185)
T KOG3336|consen  161 FEWVLKKINAEVERISTKVS  180 (185)
T ss_pred             HHHHHHHHHHHHHHhccchh
Confidence            99999999999887776444

>PF04707 PRELI: PRELI-like family; InterPro: IPR006797 These proteins contain a conserved region found in the yeast YLR168C gene MSF1 product

Probab=100.00  E-value=3.9e-52  Score=352.91  Aligned_cols=153  Identities=45%  Similarity=0.752  Sum_probs=147.5

Q ss_pred             eeeeecccccCCCCCCCccceeeEEEeEee-CCeEEEEEeeecccCCChhhHhhhcC-ceeEEEEEeeeeCCCCeEEEEE
Q psy2572          61 EQVAQGYWRRYPNPESTHVLSEDIVDQRIT-DNKLFTKRILTKTNNAPKWGERFIKT-NKIKIVEESICDPKEKTLTTYT  138 (264)
Q Consensus        61 e~V~~a~~~KYPnP~~~hV~s~DVlersV~-dg~L~t~RLi~~~~~lP~w~~kl~g~-~~~~i~E~S~VDp~~rtm~~~T  138 (264)
                      |+|++|||+|||||+++||+++|||+|+|| ||+|+|+||+++++++|+|++||+|. ..++++|+|+|||++|+|+++|
T Consensus         1 e~V~~a~w~kYPnp~~~hVl~~Dvl~r~vd~~g~l~t~Rl~~~~~~~P~w~~kl~g~~~~~~~~E~S~vD~~~k~l~~~t   80 (157)
T PF04707_consen    1 ETVTSAFWRKYPNPYSPHVLSVDVLDREVDPDGKLHTKRLITKKNNLPRWLKKLIGVDSECYIIEESIVDPKNKTLTTKT   80 (157)
T ss_pred             CHhHHHHHhhCCCCCCCceeEEEEEEEEEcCCCcEEEeeeeeeecCchHHHHHHhCcCceEEEEEEEEEECCCCEEEEEE
Confidence            579999999999999999999999999999 89999999999999999999999995 4588999999999999999999


Q ss_pred             EeccccceEEEEEEEEEEecCCCCCeeEEEEEEEEEEee--ecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q psy2572         139 RNIGYTSVMSVIEKVEYKVSDENENWTLAKRSVWIDSKM--YGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPN  213 (264)
Q Consensus       139 ~Nls~~~~~~V~E~~~Y~~~p~np~~T~~~q~a~I~s~~--~g~~~~iE~~~~~rf~~na~Kgr~g~e~vl~~l~~e  213 (264)
                      +|++|++++.|+|+|+|.|||+||+||+|+|+|+|++.+  +||+++||+|+++||++|+.|||+||++||++|.+|
T Consensus        81 ~Nls~~~~~~v~E~~~Y~~~p~np~~T~~~q~a~i~~~~~~~~~~~~iE~~~~~~f~~na~kgr~~~e~vi~~l~~~  157 (157)
T PF04707_consen   81 RNLSFSSFLSVEETCVYKPHPDNPNWTLFKQEATISIKGSFSGFSSRIEKFSVSRFKSNAKKGREGMEWVIKKLEEE  157 (157)
T ss_pred             EEcccCceeEEEEEEEEEECCCCCCcceEEEEEEEEEeCchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999955  899999999999999999999999999999999875

The function of this protein is unknown, though it is thought to be involved in intra-mitochondrial protein sorting. GFP-tagged MSF1 localizes to mitochondria and is required for wild-type respiratory growth []. This region is also found in a number of other eukaryotic proteins. The PRELI/MSF1 domain is an eukaryotic protein module which occurs in stand-alone form in several proteins, including the human PRELI protein and the yeast MSF1 protein, and as an amino-terminal domain in an orthologous group of proteins typified by human SEC14L1, which is conserved in all animals. In this group of proteins, the PRELI/MSF1 domain co-occurs with the CRAL-TRIO (see PDOC50191 from PROSITEDOC) and the GOLD domains (see PDOC50866 from PROSITEDOC). The PRELI/MSF1 domain is approximately 170 residues long and is predicted to assume a globular alpha + beta fold with six beta strands and four alpha helices. It has been suggested that the PRELI/MSF1 domain may have a function associated with cellular membrane [].

>KOG3337|consensus

Probab=100.00  E-value=4.3e-49  Score=334.41  Aligned_cols=170  Identities=35%  Similarity=0.671  Sum_probs=156.2

Q ss_pred             CceEeecceeecCChHHHHHHHHhhCCCCCCCceeeeeecccccceeeEEecCeeeeecceeeeecccccCCCCCCCccc
Q psy2572           1 MVKYFENKTVFRFNWEQVAQGYWRRYPNPESLVKVKYSTCGVCLLMVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVL   80 (264)
Q Consensus         1 m~~~~~~~~~~~~~w~~v~~a~~~kYpnp~~~hv~~~dv~~~~~~m~k~~~~~~~~~~~we~V~~a~~~KYPnP~~~hV~   80 (264)
                      |++|+.++++|+++|++|+.|||+||||||++||||+||                                         
T Consensus         1 Mvl~~~~~t~lp~s~d~VssAfw~RYPNpySkHVlSeDv-----------------------------------------   39 (201)
T KOG3337|consen    1 MVLYDLGQTVLPSSWDQVSSAFWQRYPNPYSKHVLSEDV-----------------------------------------   39 (201)
T ss_pred             CeeEecCCCcccCcHHHHHHHHHHhCCCccccccccHHH-----------------------------------------
Confidence            888999999999999999999999999999999888887                                         


Q ss_pred             eeeEEEeEee-CCeEEEEEeeecccCCChhhHhhhcCceeEEEEEeeeeCCCCeEEEEEEeccccceEEEEEEEEEEecC
Q psy2572          81 SEDIVDQRIT-DNKLFTKRILTKTNNAPKWGERFIKTNKIKIVEESICDPKEKTLTTYTRNIGYTSVMSVIEKVEYKVSD  159 (264)
Q Consensus        81 s~DVlersV~-dg~L~t~RLi~~~~~lP~w~~kl~g~~~~~i~E~S~VDp~~rtm~~~T~Nls~~~~~~V~E~~~Y~~~p  159 (264)
                          |||.|+ ||.|+|+||+.+++++|+|+.+|+....++++|+|+|||.+++|.++|+||+|.++|.|+|+|+|..+.
T Consensus        40 ----leR~Vt~dg~L~T~RLLvKqgRlPrWasrll~i~~v~viE~SVvdp~nqtmkTyTrNldH~~lm~v~Erc~y~~ss  115 (201)
T KOG3337|consen   40 ----LEREVTDDGTLVTKRLLVKQGRLPRWASRLLDIQVVYVIEESVVDPVNQTMKTYTRNLDHARLMVVEERCVYCVSS  115 (201)
T ss_pred             ----HhhhcCcccceehhhhHHhcCCCchhhhhhcccceeEEeeeeecCccccceeeeeeccccceeeEEEEEEEEEecC
Confidence                355666 999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCeeEEEEEEEEEEeeecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch
Q psy2572         160 ENENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMTNGFNFILNAMFPNVL  215 (264)
Q Consensus       160 ~np~~T~~~q~a~I~s~~~g~~~~iE~~~~~rf~~na~Kgr~g~e~vl~~l~~e~~  215 (264)
                      +||+++.-.++.++++..+|+++++++|++.||++|..|+|.||++||++++++..
T Consensus       116 dns~ti~d~~~kfvss~~~G~~r~Vqe~sl~rFkenv~ktrkGl~yvlqk~fg~a~  171 (201)
T KOG3337|consen  116 DNSGTIEDRREKFVSSSLFGVSRAVQEFSLARFKENVTKTRKGLEYVLQKLFGEAN  171 (201)
T ss_pred             CCCcchhHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcccc
Confidence            99876666666666666799999999999999999999999999999999998864

>KOG3336|consensus

Probab=99.79  E-value=1.7e-19  Score=153.85  Aligned_cols=114  Identities=15%  Similarity=0.237  Sum_probs=96.1

Q ss_pred             ceEeecceeecCChHHHHHHHHhhCCCCCCCceeeeeecccccceeeEEecCeeeeecceeeeecccccCCCCCCCccce
Q psy2572           2 VKYFENKTVFRFNWEQVAQGYWRRYPNPESLVKVKYSTCGVCLLMVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLS   81 (264)
Q Consensus         2 ~~~~~~~~~~~~~w~~v~~a~~~kYpnp~~~hv~~~dv~~~~~~m~k~~~~~~~~~~~we~V~~a~~~KYPnP~~~hV~s   81 (264)
                      ||+|+++|+|+|||++|++|.|+|||||+++||+++||      +.|..+.++++.+.+++-.....|+|-..+...-..
T Consensus         1 MKi~~seh~F~hPwE~Vt~A~w~KyPnp~~~hVi~VDv------l~R~l~~~GkL~TeRlit~~~~~P~w~~~LiG~a~~   74 (185)
T KOG3336|consen    1 MKIFQSEHIFDHPWETVTAAAWRKYPNPINTHVIGVDV------LDRKLDDSGKLHTERLITIHQGLPSWIHKLIGGANT   74 (185)
T ss_pred             CccccccccccCcHHHHHHHHHHhCCCCCCCceEEEee------eeeeeccCceEEEeeeeeeccCCcHHHHHHhCcccc
Confidence            89999999999999999999999999999999999999      555556678999999999999999998877777777


Q ss_pred             eeEEEeEeeCCeEEEEEeeecccCCChhhHhhhcCceeEEEEEeeeeCC
Q psy2572          82 EDIVDQRITDNKLFTKRILTKTNNAPKWGERFIKTNKIKIVEESICDPK  130 (264)
Q Consensus        82 ~DVlersV~dg~L~t~RLi~~~~~lP~w~~kl~g~~~~~i~E~S~VDp~  130 (264)
                      +.+-|.+++|++-++-.|.++.-.++.         ...+-|.-.++|.
T Consensus        75 ~yv~E~SvVD~~~ksm~L~t~Nltf~~---------~l~vdE~l~Y~Ph  114 (185)
T KOG3336|consen   75 CYVREVSVVDPKRKSMTLKTCNLTFSD---------FLSVDERLTYSPH  114 (185)
T ss_pred             eEEEEEEEEcCccceEEEEeccccccc---------ceEeeeEEEecCC
Confidence            899999999999667677776544443         3357788887764

>PF04707 PRELI: PRELI-like family; InterPro: IPR006797 These proteins contain a conserved region found in the yeast YLR168C gene MSF1 product

Probab=99.62  E-value=8.2e-16  Score=130.55  Aligned_cols=109  Identities=21%  Similarity=0.342  Sum_probs=85.4

Q ss_pred             HHHHHHHHhhCCCCCCCceeeeeecccccceeeEEecCeeeeecceeeeecccccCCCCCCCccceeeEEEeEeeCCeEE
Q psy2572          16 EQVAQGYWRRYPNPESLVKVKYSTCGVCLLMVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLF   95 (264)
Q Consensus        16 ~~v~~a~~~kYpnp~~~hv~~~dv~~~~~~m~k~~~~~~~~~~~we~V~~a~~~KYPnP~~~hV~s~DVlersV~dg~L~   95 (264)
                      |+|++|||+|||||+++||+++||      +.+.+++.+.+...+...+....|+|-..+.+....+.++|+++.|.+  
T Consensus         1 e~V~~a~w~kYPnp~~~hVl~~Dv------l~r~vd~~g~l~t~Rl~~~~~~~P~w~~kl~g~~~~~~~~E~S~vD~~--   72 (157)
T PF04707_consen    1 ETVTSAFWRKYPNPYSPHVLSVDV------LDREVDPDGKLHTKRLITKKNNLPRWLKKLIGVDSECYIIEESIVDPK--   72 (157)
T ss_pred             CHhHHHHHhhCCCCCCCceeEEEE------EEEEEcCCCcEEEeeeeeeecCchHHHHHHhCcCceEEEEEEEEEECC--
Confidence            589999999999999999999999      888888889999999999999999988777765666899999999887  


Q ss_pred             EEEeeecccCCChhhHhhhcCceeEEEEEee--eeCCCCeEEEEEE
Q psy2572          96 TKRILTKTNNAPKWGERFIKTNKIKIVEESI--CDPKEKTLTTYTR  139 (264)
Q Consensus        96 t~RLi~~~~~lP~w~~kl~g~~~~~i~E~S~--VDp~~rtm~~~T~  139 (264)
                      .++|..++.|+- + .++     ..+.|.++  .||.+...|+.+.
T Consensus        73 ~k~l~~~t~Nls-~-~~~-----~~v~E~~~Y~~~p~np~~T~~~q  111 (157)
T PF04707_consen   73 NKTLTTKTRNLS-F-SSF-----LSVEETCVYKPHPDNPNWTLFKQ  111 (157)
T ss_pred             CCEEEEEEEEcc-c-Cce-----eEEEEEEEEEECCCCCCcceEEE
Confidence            667777776652 1 122     34777776  4555555555444

The function of this protein is unknown, though it is thought to be involved in intra-mitochondrial protein sorting. GFP-tagged MSF1 localizes to mitochondria and is required for wild-type respiratory growth []. This region is also found in a number of other eukaryotic proteins. The PRELI/MSF1 domain is an eukaryotic protein module which occurs in stand-alone form in several proteins, including the human PRELI protein and the yeast MSF1 protein, and as an amino-terminal domain in an orthologous group of proteins typified by human SEC14L1, which is conserved in all animals. In this group of proteins, the PRELI/MSF1 domain co-occurs with the CRAL-TRIO (see PDOC50191 from PROSITEDOC) and the GOLD domains (see PDOC50866 from PROSITEDOC). The PRELI/MSF1 domain is approximately 170 residues long and is predicted to assume a globular alpha + beta fold with six beta strands and four alpha helices. It has been suggested that the PRELI/MSF1 domain may have a function associated with cellular membrane [].

>KOG3337|consensus

Probab=98.38  E-value=6.3e-08  Score=83.40  Aligned_cols=135  Identities=28%  Similarity=0.394  Sum_probs=81.2

Q ss_pred             eeeEEecCeeeeecceeeeecccccCCCCCCCccceeeEEEeEeeCCeEEEE-EeeecccCCChhhHhhhcCceeEEEEE
Q psy2572          46 MVKYFENKTVFRFNWEQVAQGYWRRYPNPESTHVLSEDIVDQRITDNKLFTK-RILTKTNNAPKWGERFIKTNKIKIVEE  124 (264)
Q Consensus        46 m~k~~~~~~~~~~~we~V~~a~~~KYPnP~~~hV~s~DVlersV~dg~L~t~-RLi~~~~~lP~w~~kl~g~~~~~i~E~  124 (264)
                      |+.+..+++.|+++|++|..|||.|||||+++||++     ..|....+.-. +|.++         ||+-..       
T Consensus         1 Mvl~~~~~t~lp~s~d~VssAfw~RYPNpySkHVlS-----eDvleR~Vt~dg~L~T~---------RLLvKq-------   59 (201)
T KOG3337|consen    1 MVLYDLGQTVLPSSWDQVSSAFWQRYPNPYSKHVLS-----EDVLEREVTDDGTLVTK---------RLLVKQ-------   59 (201)
T ss_pred             CeeEecCCCcccCcHHHHHHHHHHhCCCcccccccc-----HHHHhhhcCcccceehh---------hhHHhc-------
Confidence            677888999999999999999999999999999863     32223332212 55554         444211       


Q ss_pred             eeeeCCCCeEEEE-EEeccccceEEEEEEEEEEecCCCCCeeEEEEE-------------EEEEEe--eecHHHHHHHHH
Q psy2572         125 SICDPKEKTLTTY-TRNIGYTSVMSVIEKVEYKVSDENENWTLAKRS-------------VWIDSK--MYGFSLAIQKFG  188 (264)
Q Consensus       125 S~VDp~~rtm~~~-T~Nls~~~~~~V~E~~~Y~~~p~np~~T~~~q~-------------a~I~s~--~~g~~~~iE~~~  188 (264)
                             .+|-.- ++-+. -+..-|.|..+|.|.  |...+-+++.             ..+.++  ..-+...+|+|.
T Consensus        60 -------gRlPrWasrll~-i~~v~viE~SVvdp~--nqtmkTyTrNldH~~lm~v~Erc~y~~ssdns~ti~d~~~kfv  129 (201)
T KOG3337|consen   60 -------GRLPRWASRLLD-IQVVYVIEESVVDPV--NQTMKTYTRNLDHARLMVVEERCVYCVSSDNSGTIEDRREKFV  129 (201)
T ss_pred             -------CCCchhhhhhcc-cceeEEeeeeecCcc--ccceeeeeeccccceeeEEEEEEEEEecCCCCcchhHHHHHHh
Confidence                   111100 11111 233457788888765  3333333321             111111  122677788887


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCc
Q psy2572         189 LERYKKNILKMTNGFNFILNAMFPNV  214 (264)
Q Consensus       189 ~~rf~~na~Kgr~g~e~vl~~l~~e~  214 (264)
                      ..   .+.+.+|..-+|.|.+.....
T Consensus       130 ss---~~~G~~r~Vqe~sl~rFkenv  152 (201)
T KOG3337|consen  130 SS---SLFGVSRAVQEFSLARFKENV  152 (201)
T ss_pred             hh---hhhhhHHHHHHHHHHHHHHHH
Confidence            66   688888888899988775443

>PF02121 IP_trans: Phosphatidylinositol transfer protein; InterPro: IPR001666 Phosphatidylinositol transfer protein (PITP) is a ubiquitous cytosolic protein, thought to be involved in transport of phospholipids from their site of synthesis in the endoplasmic reticulum and Golgi to other cell membranes []

Probab=96.56  E-value=0.034  Score=51.15  Aligned_cols=123  Identities=19%  Similarity=0.344  Sum_probs=80.9

Q ss_pred             ceeeEEEeEe-eC----CeEEEEEeeecccCCChhhHhhhcCceeEEEEEee-eeCCCCeEEEEEEeccccceEEEEEEE
Q psy2572          80 LSEDIVDQRI-TD----NKLFTKRILTKTNNAPKWGERFIKTNKIKIVEESI-CDPKEKTLTTYTRNIGYTSVMSVIEKV  153 (264)
Q Consensus        80 ~s~DVlersV-~d----g~L~t~RLi~~~~~lP~w~~kl~g~~~~~i~E~S~-VDp~~rtm~~~T~Nls~~~~~~V~E~~  153 (264)
                      ..+.||..+- ++    .-.+|++++.....+|+|++.|++.....+.|+|+ ..|-.+|.-  |.. -+.+|.-..|+ 
T Consensus        38 eGVEvl~Nep~~~~~g~~GqYT~K~y~l~sklP~~ir~l~P~~~l~v~E~aWNaYPy~~T~~--t~~-~~~kF~i~IET-  113 (254)
T PF02121_consen   38 EGVEVLKNEPYEDEPGGKGQYTHKIYHLASKLPSWIRALLPKGALYVHEKAWNAYPYCKTVY--TNP-YMDKFSIKIET-  113 (254)
T ss_dssp             BEEEEEEEEEEE-TTS-EEEEEEEEEEETTTS-HHHHTTSTTTTTEEEEEEEEETTEEEEEE--EET-TTGGEEEEEEE-
T ss_pred             cceEEEEecccccCCCCceeeEEEEEEecccChHHHHHhCCCceEEEEEEEecccceEEEEE--ecC-CCCceEEEEEE-
Confidence            4456665433 22    22689999999999999999999988888999998 467776544  322 44677666676 


Q ss_pred             EEEecC---C----------------------------------C---------------CCe--e--------EEE--E
Q psy2572         154 EYKVSD---E----------------------------------N---------------ENW--T--------LAK--R  169 (264)
Q Consensus       154 ~Y~~~p---~----------------------------------n---------------p~~--T--------~~~--q  169 (264)
                      .|.++-   +                                  |               ++|  +        ++.  .
T Consensus       114 ~~~~d~G~~eNv~~L~~~~lk~reV~~IDI~~d~i~~~dyk~~eDp~~f~S~ktgRGPL~~~W~~~~~~~~~~PiMc~YK  193 (254)
T PF02121_consen  114 MHKPDNGTSENVFNLSPEELKKREVVFIDIANDPISPKDYKEEEDPTKFKSKKTGRGPLKEDWRKEWKKNGKKPIMCCYK  193 (254)
T ss_dssp             EEESSSS--TTTT---HHHHTTSEEEEE-TTGGGS-CCC--GGG-CCC---TTT------TTHHHHHCTSSSS--EEEEE
T ss_pred             EEcCCCCCcCcccCCCHHHhcCceEEEEEecCCcccccccCcccCchheEecCCCCCCCCcchhhhhhhcCCCCEEEEEE
Confidence            444431   0                                  1               121  1        111  2


Q ss_pred             EEEEEEeeecHHHHHHHHHHHHH-HHHHHHH-HHHHHHH
Q psy2572         170 SVWIDSKMYGFSLAIQKFGLERY-KKNILKM-TNGFNFI  206 (264)
Q Consensus       170 ~a~I~s~~~g~~~~iE~~~~~rf-~~na~Kg-r~g~e~v  206 (264)
                      -.+|....|||+.++|+|..+.+ +.-..++ |++|-|+
T Consensus       194 lv~v~f~~~GlQ~~vE~~I~~~~~r~i~~~~HRq~fcw~  232 (254)
T PF02121_consen  194 LVTVEFKWWGLQTKVENFIHKQILRRIFLNFHRQAFCWI  232 (254)
T ss_dssp             EEEEEE--TTTHHHHHHHHHHHH-HHHHHHHHHHHHHTH
T ss_pred             EEEEEeeeechHHHHHHHHHHhhhhHHHHHHHHHHheeh
Confidence            34455567999999999999988 8887777 7887765

More recently, PITP has been shown to be an essential component of the polyphosphoinositide synthesis machinery and is hence required for proper signalling by epidermal growth factor and f-Met-Leu-Phe, as well as for exocytosis. The role of PITP in polyphosphoinositide synthesis may also explain its involvement in intracellular vesicular traffic [].; GO: 0006810 transport, 0005622 intracellular; PDB: 1T27_A 1KCM_A 2A1L_A 1UW5_C.

>PF10698 DUF2505: Protein of unknown function (DUF2505); InterPro: IPR019639 This entry represents proteins found Actinobacteria and Proteobacteria

Probab=95.88  E-value=0.91  Score=38.26  Aligned_cols=112  Identities=13%  Similarity=0.064  Sum_probs=75.2

Q ss_pred             EEEeEee-CCeEEEEEeeecccCCChhhHhhhcCceeEEEEEeeeeC-CCCeEEEEEEeccc-cceEEEEEEEEEEecCC
Q psy2572          84 IVDQRIT-DNKLFTKRILTKTNNAPKWGERFIKTNKIKIVEESICDP-KEKTLTTYTRNIGY-TSVMSVIEKVEYKVSDE  160 (264)
Q Consensus        84 VlersV~-dg~L~t~RLi~~~~~lP~w~~kl~g~~~~~i~E~S~VDp-~~rtm~~~T~Nls~-~~~~~V~E~~~Y~~~p~  160 (264)
                      +.+-.++ ||...+.+...-.-.+|..++||+|.+.....++.+ .| .....+.. ..++. ..-+++.=.+++.|.  
T Consensus        38 ~~~~~~~~~g~~v~~~~~v~~~~lP~~~~k~v~~~l~v~~~e~w-~~~~~g~~~g~-~~~~~~G~P~~~~G~~~L~~~--  113 (159)
T PF10698_consen   38 VESFEVDGDGVRVTVRQTVPADKLPSAARKFVGGDLRVTRTETW-TPLDDGRRTGT-FTVSIPGAPVSISGTMRLRPD--  113 (159)
T ss_pred             EEEEEEcCCeEEEEEEEecChhhCCHHHHHhcCCCeEEEEEEEE-ecCCCCeEEEE-EEEEecCceEEEEEEEEEecC--
Confidence            3444445 664444444334448999999999977555555666 55 33333322 23333 455777777888884  


Q ss_pred             CCCeeEEEEEEEEEEeeecHHHHHHHHHHHHHHHHHHHHH
Q psy2572         161 NENWTLAKRSVWIDSKMYGFSLAIQKFGLERYKKNILKMT  200 (264)
Q Consensus       161 np~~T~~~q~a~I~s~~~g~~~~iE~~~~~rf~~na~Kgr  200 (264)
                       ++.|.+.-++.|+++...++.+||++......+...+-.
T Consensus       114 -~~gt~~~~~g~v~v~VPlvGgkiE~~v~~~~~~~~~~e~  152 (159)
T PF10698_consen  114 -GGGTRLTVEGEVKVKVPLVGGKIEKAVAENLRKLLEAEQ  152 (159)
T ss_pred             -CCCEEEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHH
Confidence             456999999999998888889999999887777665543

The function is not known.

>cd07815 SRPBCC_PITP Lipid-binding SRPBCC domain of Class I and Class II Phosphatidylinositol Transfer Proteins

Probab=95.52  E-value=0.43  Score=43.87  Aligned_cols=55  Identities=20%  Similarity=0.283  Sum_probs=41.0

Q ss_pred             cceeeEEEeEee-CC----eEEEEEeeecccCCChhhHhhhcCceeEEEEEee-eeCCCCe
Q psy2572          79 VLSEDIVDQRIT-DN----KLFTKRILTKTNNAPKWGERFIKTNKIKIVEESI-CDPKEKT  133 (264)
Q Consensus        79 V~s~DVlersV~-dg----~L~t~RLi~~~~~lP~w~~kl~g~~~~~i~E~S~-VDp~~rt  133 (264)
                      -..+.||.-+-- |+    --+|++++.....+|+|++.+++.....+.|++. ..|-.+|
T Consensus        35 GeGVEvl~Nepy~~~~~~~GqYT~Kiyhl~sklP~w~~~~~P~~al~v~EkaWNaYPy~~T   95 (251)
T cd07815          35 GEGVEVLKNEPYEDENGGKGQYTHKIYHLGSKLPSWLRALAPKSALTIEEKSWNAYPYCKT   95 (251)
T ss_pred             CccEEEEeccCcccCCCCcceeEEEEEEccccchhHHHHhCCccceEEEhhhhCCCCceeE
Confidence            344566654332 22    3589999999999999999999988888889887 5666665

This family includes the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of the phosphatidylinositol transfer protein (PITP) family of lipid transfer proteins. This family of proteins includes Class 1 PITPs (PITPNA/PITPalpha and PITPNB/PITPbeta, Drosophila vibrator and related proteins), Class IIA PITPs (PITPNM1/PITPalphaI/Nir2, PITPNM2/PITPalphaII/Nir3, Drosophila RdgB, and related proteins), and Class IIB PITPs (PITPNC1/RdgBbeta and related proteins). The PITP family belongs to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. In vitro, PITPs bind phosphatidylinositol (PtdIns), as well as phosphatidylcholine (PtdCho) but with a lower affinity. They transfer these lipids from one membrane compartment to another. The cellular roles of PITPs include inositol lipid signaling, PtdIns

>cd08889 SRPBCC_PITPNM1-2_like Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)

Probab=93.70  E-value=1.4  Score=40.71  Aligned_cols=54  Identities=20%  Similarity=0.397  Sum_probs=40.2

Q ss_pred             ceeeEEEeEee-CC----eEEEEEeeecccCCChhhHhhhcCceeEEEEEee-eeCCCCe
Q psy2572          80 LSEDIVDQRIT-DN----KLFTKRILTKTNNAPKWGERFIKTNKIKIVEESI-CDPKEKT  133 (264)
Q Consensus        80 ~s~DVlersV~-dg----~L~t~RLi~~~~~lP~w~~kl~g~~~~~i~E~S~-VDp~~rt  133 (264)
                      -.+.||+-+-- |+    --+|++++.....+|+|++.+++.....+.|+++ .-|-.+|
T Consensus        38 eGVEvl~Nepy~~~~~~~GqYT~Kiyhl~sklP~wl~~~~P~~al~v~EkaWNaYPy~~T   97 (260)
T cd08889          38 SGVEILENRPYTDGPGGSGQYTHKIYHIGSHIPGWFRAILPKSALRVEEEAWNAYPYTRT   97 (260)
T ss_pred             ceEEEEeccccccCCCCcceeEEEEEEccccChHHHHHhCCCcceEEehhHhCCCCceEE
Confidence            35667664332 32    3489999999999999999999887777888886 5566555

This subgroup includes an N-terminal SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of mammalian Class II phosphatidylinositol transfer protein (PITPs), PITPNM1/PITPalphaI/Nir2 (PYK2 N-terminal domain-interacting receptor2) and PITPNM2/PITPalphaII/Nir3), Drosophila RdgB, and related proteins. These are membrane associated multidomain proteins belonging to the PITP family of lipid transfer proteins, and to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. In vitro, PITPs bind phosphatidylinositol (PtdIns), as well as phosphatidylcholine (PtdCho) but with a lower affinity. They transfer these lipids from one membrane compartment to another. The cellular roles of PITPs include inositol lipid signaling, PtdIns metabolism, and membrane trafficking. Ablation of the mouse gene en

>cd08890 SRPBCC_PITPNC1_like Lipid-binding SRPBCC domain of mammalian PITPNC1,and related proteins (Class IIB PITPs)

Probab=92.90  E-value=1.4  Score=40.48  Aligned_cols=53  Identities=17%  Similarity=0.298  Sum_probs=38.0

Q ss_pred             cceeeEEEeEee-C-----CeEEEEEeeecccCCChhhHhhhcCceeEEEEEee-eeCCCCe
Q psy2572          79 VLSEDIVDQRIT-D-----NKLFTKRILTKTNNAPKWGERFIKTNKIKIVEESI-CDPKEKT  133 (264)
Q Consensus        79 V~s~DVlersV~-d-----g~L~t~RLi~~~~~lP~w~~kl~g~~~~~i~E~S~-VDp~~rt  133 (264)
                      -.++.||.-+-- |     |+ +|+.++.....+|+|++.+++.. ..+.|++. ..|-.+|
T Consensus        35 geGVEvl~Nep~~~~~~~~Gq-YT~K~~hl~sklP~w~r~~~P~~-l~v~EkaWNaYPy~~T   94 (250)
T cd08890          35 GEGVEVVQNEPCEDPEHGNGQ-FTEKRVYLNSRLPSWARAVVPKI-FYVTEKAWNYYPYTIT   94 (250)
T ss_pred             CccEEEEeccccccCCCCccc-eeEEEEEccccChhHHHHhCCcc-eEEehhhhccCCceee
Confidence            345667664432 2     55 78888889999999999999876 56778876 4555554

This subgroup includes the N-terminal SRPBCC (START/RHO_alpha_C /PITP /Bet_v1/CoxG/CalC) domain of mammalian Class IIB phosphatidylinositol transfer protein (PITP), PITPNC1/RdgBbeta, and related proteins. These are metazoan proteins belonging to the PITP family of lipid transfer proteins, and to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. In vitro, PITPs bind phosphatidylinositol (PtdIns), as well as phosphatidylcholine (PtdCho) but with a lower affinity. They transfer these lipids from one membrane compartment to another. The cellular roles of PITPs include inositol lipid signaling, PtdIns metabolism, and membrane trafficking. Mammalian PITPNC1 contains an amino-terminal SRPBCC PITP-like domain and a short carboxyl-terminal domain. It is a cytoplasmic protein, and is ubiquitously

>cd08888 SRPBCC_PITPNA-B_like Lipid-binding SRPBCC domain of mammalian PITPNA, -B, and related proteins (Class I PITPs)

Probab=90.67  E-value=7.6  Score=35.95  Aligned_cols=54  Identities=13%  Similarity=0.203  Sum_probs=39.1

Q ss_pred             ceeeEEEeEee-CC----eEEEEEeeecccCCChhhHhhhcCceeEEEEEee-eeCCCCe
Q psy2572          80 LSEDIVDQRIT-DN----KLFTKRILTKTNNAPKWGERFIKTNKIKIVEESI-CDPKEKT  133 (264)
Q Consensus        80 ~s~DVlersV~-dg----~L~t~RLi~~~~~lP~w~~kl~g~~~~~i~E~S~-VDp~~rt  133 (264)
                      ..+.||.-+-- ++    --+|++++.....+|+|++.+++.....+.|+++ -.|-.+|
T Consensus        36 eGVEvl~Nepy~~~~~~~GqYT~Kiyhl~sklP~wir~~~P~~al~v~EkaWNaYPy~~T   95 (258)
T cd08888          36 EGIEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPGFVRMLAPEGSLEIHEKAWNAYPYCRT   95 (258)
T ss_pred             ccEEEEeccccccCCCCcceeEEEEEEccccchhHHHHhCCCcceEEehhhhcCCCceEE
Confidence            34666664332 22    3489999999999999999999887777888886 4455444

This subgroup includes the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of mammalian Class 1 phosphatidylinositol transfer proteins (PITPs), PITPNA/PITPalpha and PITPNB/PITPbeta, Drosophila vibrator, and related proteins. These are single domain proteins belonging to the PITP family of lipid transfer proteins, and to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. In vitro, PITPs bind phosphatidylinositol (PtdIns), as well as phosphatidylcholine (PtdCho) but with a lower affinity. They transfer these lipids from one membrane compartment to another. The cellular roles of PITPs include inositol lipid signaling, PtdIns metabolism, and membrane trafficking. In addition, PITPNB transfers sphingomyelin in vitro, with a low affinity. PITPNA is found chiefly in the nucleus and cy

>KOG3668|consensus

Probab=86.08  E-value=2  Score=39.55  Aligned_cols=41  Identities=22%  Similarity=0.396  Sum_probs=33.9

Q ss_pred             EEEEEeeecccCCChhhHhhhcCceeEEEEEee-eeCCCCeE
Q psy2572          94 LFTKRILTKTNNAPKWGERFIKTNKIKIVEESI-CDPKEKTL  134 (264)
Q Consensus        94 L~t~RLi~~~~~lP~w~~kl~g~~~~~i~E~S~-VDp~~rtm  134 (264)
                      =+|+++......+|+|++.|++.....+.|+|+ --|-.+|.
T Consensus        57 qyThKIyhl~sk~P~~~r~l~Pk~al~v~EesWNAYPy~rT~   98 (269)
T KOG3668|consen   57 QYTHKIYHLGSKVPAWLRSLLPKGALIVHEESWNAYPYTRTR   98 (269)
T ss_pred             ceEEEEEEecccchHHHHHhCCccceEEeeecccccceEEEE
Confidence            379999999999999999999988888999996 44554443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	264
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.1 bits (129), Expect = 2e-08
 Identities = 41/267 (15%), Positives = 78/267 (29%), Gaps = 58/267 (21%)

Query: 15  WEQVAQGYWRRYPNPESLVKVKYSTCGVCL---LMVKYFENKTVFRFNW---EQVAQGYW 68
           W+      W+   N + L  +   +    L      K F+  +VF  +      +    W
Sbjct: 344 WD-----NWKHV-NCDKLTTI-IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW 396

Query: 69  RRYPNPESTHVLSEDIVDQRIT------DNKLFTKRI-------LTKTNNAPKWGERFIK 115
                 +        +V++           K  T  I         K  N        + 
Sbjct: 397 F-----DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIV- 450

Query: 116 TNKIKIVEESICDPKEKTLTTYTRN-----IGYTSVMSVIEKVEYKVSDENENWTLAKRS 170
            +   I +       +  +  Y        IG+   +  IE  E           L  R 
Sbjct: 451 -DHYNIPK---TFDSDDLIPPYLDQYFYSHIGHH--LKNIEHPER--MTLFRMVFLDFR- 501

Query: 171 VWIDSKMYGFSLAIQKFG--------LERYKKNILKMTNGFNFILNAMFPNVLQQNANLA 222
            +++ K+   S A    G        L+ YK  I      +  ++NA+   + +   NL 
Sbjct: 502 -FLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLI 560

Query: 223 STMSSTNQNFAINPDK---LKEKAKKV 246
            +  +     A+  +     +E  K+V
Sbjct: 561 CSKYTDLLRIALMAEDEAIFEEAHKQV 587

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	264
1kcm_A	270	PITP alpha, phosphatidylinositol transfer protein	94.94

>1kcm_A PITP alpha, phosphatidylinositol transfer protein alpha; phospholipid binding protein, phospholipid transport, binding protein; 2.00A {Mus musculus} SCOP: d.129.3.4 PDB: 1t27_A* 1uw5_A* 2a1l_A*

Probab=94.94  E-value=0.52  Score=42.51  Aligned_cols=124  Identities=17%  Similarity=0.206  Sum_probs=78.3

Q ss_pred             cceeeEEEeEee---CC--eEEEEEeeecccCCChhhHhhhcCceeEEEEEee-eeCCCCeEEEEEEeccc-cceEEEEE
Q psy2572          79 VLSEDIVDQRIT---DN--KLFTKRILTKTNNAPKWGERFIKTNKIKIVEESI-CDPKEKTLTTYTRNIGY-TSVMSVIE  151 (264)
Q Consensus        79 V~s~DVlersV~---dg--~L~t~RLi~~~~~lP~w~~kl~g~~~~~i~E~S~-VDp~~rtm~~~T~Nls~-~~~~~V~E  151 (264)
                      -..+.||.-+--   +|  --+|++++.....+|+|++.|++.....+.|+++ -.|-.+|  .+|.+ =+ .+|.-.+|
T Consensus        36 GeGVEvl~Nepy~~~~g~~GqYT~Kiyhl~sklP~wi~~~~P~~al~v~EkaWNayPy~~T--~yt~~-~~~~kF~i~IE  112 (270)
T 1kcm_A           36 GEGVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRT--VITNE-YMKEDFLIKIE  112 (270)
T ss_dssp             TTTEEEEEEEEEECTTSCEEEEEEEEEECGGGSCHHHHTTSCTTTTEEEEEEEEETTEEEE--EEEET-TTGGGEEEEEE
T ss_pred             CceEEEEeccccccCCCCccceEEEEEEccccChHHHHHhCCccceEEEeehhccCcceee--EecCC-CcCcceEEEEE
Confidence            344566654332   22  3689999999999999999999988888999997 4454444  34432 23 24544555


Q ss_pred             EEEEEecC-----------------------------------------------------CCCCe--e----------E
Q psy2572         152 KVEYKVSD-----------------------------------------------------ENENW--T----------L  166 (264)
Q Consensus       152 ~~~Y~~~p-----------------------------------------------------~np~~--T----------~  166 (264)
                      + .|.++.                                                     =.++|  +          +
T Consensus       113 T-~h~~d~g~~eNv~~L~~~~l~~reV~~IDIa~~~~~~~~dY~~eeDp~~f~S~ktgRGPL~~~W~~~~~~~~~~PiMc  191 (270)
T 1kcm_A          113 T-WHKPDLGTQENVHKLEPEAWKHVEAIYIDIADRSQVLSKDYKAEEDPAKFKSVKTGRGPLGPNWKQELVNQKDCPYMC  191 (270)
T ss_dssp             E-EEESSSSCCSSTTCCCHHHHTTCEEEEECTTCGGGSCGGGCCGGGCTTTCCCTTTCCCCCCTTHHHHHTTSTTCCCEE
T ss_pred             E-EEcCCCCCcccccCCChHHhcCceEEEEecccCcccccccCCcccCcchheecccCCCCCCcchhhhccccCCCceEE
Confidence            4 333321                                                     01234  1          1


Q ss_pred             EEEEEEEEEeeecHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q psy2572         167 AKRSVWIDSKMYGFSLAIQKFGLERYKKNILKM-TNGFNFI  206 (264)
Q Consensus       167 ~~q~a~I~s~~~g~~~~iE~~~~~rf~~na~Kg-r~g~e~v  206 (264)
                      .=.-.+|....|||+.++|+|..+..+.-..++ |++|-|+
T Consensus       192 ~YKLv~v~f~~wGlq~rvE~fI~~~~r~i~~~~HRq~fcW~  232 (270)
T 1kcm_A          192 AYKLVTVKFKWWGLQNKVENFIHKQEKRLFTNFHRQLFCWL  232 (270)
T ss_dssp             EEEEEEEEECCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred             EEEEEEEEEeecCchHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence            223455666689999999999988777655555 3666553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	264
d1t27a_	269	Phoshatidylinositol transfer protein, PITP {Rat (R	94.0

>d1t27a_ d.129.3.4 (A:) Phoshatidylinositol transfer protein, PITP {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Bet v1-like
family: Phoshatidylinositol transfer protein, PITP
domain: Phoshatidylinositol transfer protein, PITP
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.00  E-value=0.32  Score=41.70  Aligned_cols=47  Identities=13%  Similarity=0.249  Sum_probs=36.1

Q ss_pred             ceeeEEEeE-ee--C-C-eEEEEEeeecccCCChhhHhhhcCceeEEEEEee
Q psy2572          80 LSEDIVDQR-IT--D-N-KLFTKRILTKTNNAPKWGERFIKTNKIKIVEESI  126 (264)
Q Consensus        80 ~s~DVlers-V~--d-g-~L~t~RLi~~~~~lP~w~~kl~g~~~~~i~E~S~  126 (264)
                      ..+.||.-+ ..  + | --+|++++.....+|+|++.+++.....+.|+++
T Consensus        37 eGVEvl~Nepy~~~~~~~GqyT~Kiyhl~sklP~wir~~~P~~al~v~EkaW   88 (269)
T d1t27a_          37 EGVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAW   88 (269)
T ss_dssp             BEEEEEEEEEEECTTCCEEEEEEEEEECTTTSCHHHHTTSCTTTTCEEEEEE
T ss_pred             ccEEEEEccCcccCCCCcceeEeeEEEhhhhChHHHHHhCCccccEEEEEee
Confidence            346666533 22  2 2 3589999999999999999999988888999885