Psyllid ID: psy2610

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130---
Protein Sequence
NGRNHNPNLTLVLRPGPQSTSSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK
Secondary Structure (PSIPRED)
cccccHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccEEEEcccccEEEEcccccccccHHHHHHHHHHHccccHHHHHHcccccccccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEcccccEEEEEEEEEEEEEcccccccccccEEEccccccEEEcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccEEcccccccccHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
ngrnhnpnltlvlrpgpqstsspsdtvytdwgtgledaddsdlyfspdrgnvvfasafdgwgftiDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK
Flexible Loop (DISEMBL)
ngrnhnpnltlvlrpgpqstsspsDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK
Low Complexity Region (SEG)
NGRNHNPNLTLVLRPGPQSTSSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK
Disordered region (IsUnstruct)
**************************VYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAV***
Disordered Region (DISOPRED)
*GRNHNPNLTLVLRPGPQSTSSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAK************PLFVEFVLKNVVTLYETVAVRK*
Disordered Region (DISEMBL)
NGRNHNPNLTLVLRP***********VYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK
Disordered Region (DISPRO)
****HNPNLTLVLRPGPQSTSSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
NGRNHNPNLTLVLRPGPQSTSSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	133	2.2.26 [Sep-21-2011]
Q7Z2Z2	1120	Elongation factor Tu GTP-	no	N/A	0.804	0.095	0.620	1e-37
Q8C0D5	1127	Elongation factor Tu GTP-	yes	N/A	0.804	0.094	0.601	6e-36
O74945	1000	Ribosome assembly protein	yes	N/A	0.766	0.102	0.481	6e-24
P53893	1110	Ribosome assembly protein	yes	N/A	0.691	0.082	0.436	1e-20
P15112	839	Elongation factor 2 OS=Di	no	N/A	0.699	0.110	0.416	3e-15
Q23716	832	Elongation factor 2 OS=Cr	yes	N/A	0.646	0.103	0.333	1e-12
Q17152	867	Elongation factor 2 OS=Bl	N/A	N/A	0.646	0.099	0.4	9e-12
P29691	852	Elongation factor 2 OS=Ca	yes	N/A	0.744	0.116	0.34	4e-11
Q6BJ25	842	Elongation factor 2 OS=De	no	N/A	0.759	0.119	0.360	8e-11
C4YJQ8	842	Elongation factor 2 OS=Ca	N/A	N/A	0.691	0.109	0.347	8e-11

>sp|Q7Z2Z2|ETUD1_HUMAN Elongation factor Tu GTP-binding domain-containing protein 1 OS=Homo sapiens GN=EFTUD1 PE=1 SV=2

 Score =  154 bits (390), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/108 (62%), Positives = 86/108 (79%), Gaps = 1/108 (0%)

Query: 21  SSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIRE 80
           S   + VY DW TGLED DDS LYFSP++GNVVF SA DGWGF I+ FAR+YS K+GI++
Sbjct: 202 SEQGEQVY-DWSTGLEDTDDSHLYFSPEQGNVVFTSAIDGWGFGIEHFARIYSQKIGIKK 260

Query: 81  DILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETV 128
           ++L KTLWGDYY+N KAK+I+KG Q K K PLFV+ +L+N+ +LY+ V
Sbjct: 261 EVLMKTLWGDYYINMKAKKIMKGDQAKGKKPLFVQLILENIWSLYDAV 308

Involved in the biogenesis of the 60S ribosomal subunit and translational activation of ribosomes. Together with SBDS, triggers the GTP-dependent release of EIF6 from 60S pre-ribosomes in the cytoplasm, thereby activating ribosomes for translation competence by allowing 80S ribosome assembly and facilitating EIF6 recycling to the nucleus, where it is required for 60S rRNA processing and nuclear export. Has low intrinsic GTPase activity. GTPase activity is increased by contact with 60S ribosome subunits.
Homo sapiens (taxid: 9606)

>sp|Q8C0D5|ETUD1_MOUSE Elongation factor Tu GTP-binding domain-containing protein 1 OS=Mus musculus GN=Eftud1 PE=2 SV=1

 Score =  149 bits (375), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 65/108 (60%), Positives = 84/108 (77%), Gaps = 1/108 (0%)

Query: 21  SSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIRE 80
           S   + VY DW  GLED DDS LYFSP++GNVVF SA DGWGF I+ FAR+YS K+GI++
Sbjct: 202 SEQGEQVY-DWSAGLEDVDDSQLYFSPEQGNVVFTSAIDGWGFGIEHFARIYSQKIGIKK 260

Query: 81  DILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETV 128
           ++L KTLWGDYY+N KAK+I+K  Q K K PLFV+ +L+N+ +LY+ V
Sbjct: 261 EVLLKTLWGDYYINMKAKKIMKVDQAKGKKPLFVQLILENIWSLYDAV 308

Involved in the biogenesis of the 60S ribosomal subunit and translational activation of ribosomes. Together with SBDS, triggers the GTP-dependent release of EIF6 from 60S pre-ribosomes in the cytoplasm, thereby activating ribosomes for translation competence by allowing 80S ribosome assembly and facilitating EIF6 recycling to the nucleus, where it is required for 60S rRNA processing and nuclear export. Has low intrinsic GTPase activity. GTPase activity is increased by contact with 60S ribosome subunits.

Mus musculus (taxid: 10090)

>sp|O74945|RIA1_SCHPO Ribosome assembly protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ria1 PE=3 SV=1

 Score =  109 bits (272), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 52/108 (48%), Positives = 71/108 (65%), Gaps = 6/108 (5%)

Query: 26  TVYTDWGTGLEDAD----DSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIRED 81
           T YT     L D D    D  +YF+P++GNVVFASA+DGW F +D F+  Y  KLG+++ 
Sbjct: 187 TFYTGELMQLADNDEVISDEGIYFAPEQGNVVFASAYDGWAFCLDQFSEFYEKKLGLKQK 246

Query: 82  ILRKTLWGDYYLNAKAKRIL--KGAQEKAKAPLFVEFVLKNVVTLYET 127
            L K LWGDYYL+ K KR+L  K  Q +   P+FV+FVL+N+  +YE+
Sbjct: 247 ALTKCLWGDYYLDPKTKRVLQPKHLQGRRLKPMFVQFVLENLWAVYES 294

GTPase involved in the biogenesis of the 60S ribosomal subunit and translational activation of ribosomes. Together with sdo1, may trigger the GTP-dependent release of tif6 from 60S pre-ribosomes in the cytoplasm, thereby activating ribosomes for translation competence by allowing 80S ribosome assembly and facilitating tif6 recycling to the nucleus, where it is required for 60S rRNA processing and nuclear export. Inhibits GTPase activity of ribosome-bound EF-2.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: -

>sp|P53893|RIA1_YEAST Ribosome assembly protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIA1 PE=1 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/94 (43%), Positives = 63/94 (67%), Gaps = 2/94 (2%)

Query: 37  DADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAK 96
           + DDS +YF+P   NV+FASA DGWGF I   A+ Y  KLG + + L+K LWGD+Y++ K
Sbjct: 216 EKDDSGIYFNPTDNNVIFASAIDGWGFNIGQLAKFYEQKLGAKRENLQKVLWGDFYMDPK 275

Query: 97  AKRIL--KGAQEKAKAPLFVEFVLKNVVTLYETV 128
            K+I+  KG + ++  PLF   +L+N+  +Y+ +
Sbjct: 276 TKKIINNKGLKGRSLKPLFTSLILENIWKIYQNI 309

GTPase involved in the biogenesis of the 60S ribosomal subunit and translational activation of ribosomes. Together with SDO1, may trigger the GTP-dependent release of TIF6 from 60S pre-ribosomes in the cytoplasm, thereby activating ribosomes for translation competence by allowing 80S ribosome assembly and facilitating TIF6 recycling to the nucleus, where it is required for 60S rRNA processing and nuclear export. Inhibits GTPase activity of ribosome-bound EF-2.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: -

>sp|P15112|EF2_DICDI Elongation factor 2 OS=Dictyostelium discoideum GN=efbA PE=1 SV=2

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 3/96 (3%)

Query: 36  EDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNA 95
           ED +  D+  SP++G V F S   GWGFT+  FA+LY+AK G+ ED L   LWGD Y +A
Sbjct: 191 EDKEFGDVTVSPEKGTVAFGSGLHGWGFTLGRFAKLYAAKFGVPEDKLMGRLWGDSYFDA 250

Query: 96  KAKRILKGAQE---KAKAPLFVEFVLKNVVTLYETV 128
            AK+     Q    KA    F +FVL+ +  L   +
Sbjct: 251 TAKKWTSNPQSADGKALPRAFCQFVLEPIYQLTRAI 286

Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.

Dictyostelium discoideum (taxid: 44689)

>sp|Q23716|EF2_CRYPV Elongation factor 2 OS=Cryptosporidium parvum PE=3 SV=1

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%)

Query: 42  DLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRIL 101
           D+   P++G V F S   GW FTI+ FAR+Y+ K G+ +  + + LWGD + N + K+  
Sbjct: 193 DVQVFPEKGTVSFGSGLHGWAFTIEKFARIYAKKFGVEKSKMMQRLWGDNFFNPETKKFT 252

Query: 102 KGAQEKAKAPLFVEFVLKNVVTLYETV 128
           K  QE      F +F+++ +  L+ ++
Sbjct: 253 K-TQEPGSKRAFCQFIMEPICQLFSSI 278

Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.

Cryptosporidium parvum (taxid: 5807)

>sp|Q17152|EF2_BLAHO Elongation factor 2 OS=Blastocystis hominis PE=2 SV=1

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 9/95 (9%)

Query: 42  DLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRIL 101
           D+   P++G V F S    WGFT   FARLY+ K GI E  + + LWGDY+ +A+ K+  
Sbjct: 217 DIQVYPNQGTVAFGSGLQQWGFT-RKFARLYAKKFGIDETKMMERLWGDYFFDAENKKWA 275

Query: 102 KGAQE-----KAKAPL---FVEFVLKNVVTLYETV 128
           K  ++     + K PL   FV+FVL  V  LY  +
Sbjct: 276 KTDKKDERKAQGKKPLKRAFVQFVLDPVYGLYRAL 310

Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.

Blastocystis hominis (taxid: 12968)

>sp|P29691|EF2_CAEEL Elongation factor 2 OS=Caenorhabditis elegans GN=eef-2 PE=1 SV=4

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 34  GLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYL 93
           G +D     +   P  GNV F S   GW FT+  FA +Y+ K G++ D L K LWGD + 
Sbjct: 205 GDDDGPMGPIMVDPSIGNVGFGSGLHGWAFTLKQFAEMYAGKFGVQVDKLMKNLWGDRFF 264

Query: 94  NAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
           + K K+      +++K   F +FVL  +  +++ V   KK
Sbjct: 265 DLKTKKWSSTQTDESKRG-FCQFVLDPIFMVFDAVMNIKK 303

Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Involved in the morphogenesis of epidermal tissues.

Caenorhabditis elegans (taxid: 6239)

>sp|Q6BJ25|EF2_DEBHA Elongation factor 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=EFT1 PE=3 SV=1

 Score = 65.9 bits (159), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 10/111 (9%)

Query: 26  TVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRK 85
           + Y D   G     DS +Y  PD+G V F S   GW FT+  FA  YS K G+    + +
Sbjct: 190 STYVDSSLG-----DSQVY--PDKGTVAFGSGLHGWAFTVRQFATRYSKKFGVDRIKMME 242

Query: 86  TLWGDYYLNAKAKRIL---KGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
            LWGD Y N K K+     K A+ K     F  FVL  +  L+ ++   KK
Sbjct: 243 RLWGDSYFNPKTKKWTNKDKDAEGKTLERAFNMFVLDPIFRLFSSIMNFKK 293

Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

>sp|C4YJQ8|EF2_CANAW Elongation factor 2 OS=Candida albicans (strain WO-1) GN=EFT2 PE=3 SV=1

 Score = 65.5 bits (158), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 3/95 (3%)

Query: 42  DLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRIL 101
           D+   P +G V FAS   GW FT+  FA  YS K G+ ++ + + LWGD Y N K K+  
Sbjct: 199 DVQVYPQKGTVAFASGLHGWAFTVRQFANKYSKKFGVDKEKMMERLWGDSYFNPKTKKWT 258

Query: 102 KGAQEKAKAPL---FVEFVLKNVVTLYETVAVRKK 133
              ++    PL   F  F+L  +  L+  +   KK
Sbjct: 259 NKDKDADGKPLERAFNMFILDPIFRLFAAIMNFKK 293

Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.

Candida albicans (strain WO-1) (taxid: 294748)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
390339806	1139	PREDICTED: elongation factor Tu GTP-bind	0.804	0.093	0.685	1e-40
292615758	1115	PREDICTED: elongation factor Tu GTP-bind	0.872	0.104	0.625	2e-39
224062603	1138	PREDICTED: elongation factor Tu GTP-bind	0.857	0.100	0.652	1e-38
449266720	1129	Elongation factor Tu GTP-binding domain-	0.857	0.100	0.643	2e-38
301621627	1074	PREDICTED: elongation factor Tu GTP-bind	0.857	0.106	0.643	5e-38
301621625	1125	PREDICTED: elongation factor Tu GTP-bind	0.857	0.101	0.643	5e-38
427791285	1017	Putative translation elongation factor 2	0.857	0.112	0.601	1e-37
427784415	1114	Putative elongation factor 2 [Rhipicepha	0.857	0.102	0.601	2e-37
357627397	988	putative translation elongation factor [	0.849	0.114	0.584	2e-37
340377634	1023	PREDICTED: elongation factor Tu GTP-bind	0.864	0.112	0.594	3e-37

>gi|390339806|ref|XP_784679.3| PREDICTED: elongation factor Tu GTP-binding domain-containing protein 1 [Strongylocentrotus purpuratus]

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/108 (68%), Positives = 92/108 (85%), Gaps = 1/108 (0%)

Query: 25  DTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILR 84
           + VY DW  GLED DDS +YFSPD+GNV+FASA DGWGF+I+ FA +Y+ KLG+R D+LR
Sbjct: 206 EQVY-DWSDGLEDTDDSHIYFSPDQGNVIFASALDGWGFSINHFAEMYACKLGVRADVLR 264

Query: 85  KTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRK 132
           KTLWGD+YL+ K+KRI+KGAQ KAK PLFV+FVL+N+ +LYETV VRK
Sbjct: 265 KTLWGDFYLHTKSKRIMKGAQAKAKKPLFVQFVLENIWSLYETVIVRK 312

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|292615758|ref|XP_697184.4| PREDICTED: elongation factor Tu GTP-binding domain-containing protein 1-like [Danio rerio]

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 75/120 (62%), Positives = 92/120 (76%), Gaps = 4/120 (3%)

Query: 16  GPQST---SSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLY 72
           G QS+   +   D VY DW  GLE+ DDSDLYFSPDRGNVVFASA DGWGF+I  FA +Y
Sbjct: 195 GSQSSFTENESGDHVY-DWSAGLEETDDSDLYFSPDRGNVVFASAIDGWGFSIHQFAEMY 253

Query: 73  SAKLGIREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRK 132
           S K+GIR  +L KTLWGD+YLNAKAK+I+KGAQ K K PLFV+F+L N+ ++Y+ V  R+
Sbjct: 254 SQKMGIRSSVLLKTLWGDFYLNAKAKKIMKGAQSKGKKPLFVQFILDNIWSMYDAVVTRR 313

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|224062603|ref|XP_002199206.1| PREDICTED: elongation factor Tu GTP-binding domain-containing protein 1 isoform 1 [Taeniopygia guttata]

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 75/115 (65%), Positives = 88/115 (76%), Gaps = 1/115 (0%)

Query: 19  STSSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGI 78
           S +SP D +Y DW TGLED DDS LYFSP+ GNVVFASA DGWGF I+ FA+LYS K+GI
Sbjct: 200 SDASPGDQIY-DWSTGLEDTDDSHLYFSPEHGNVVFASAIDGWGFGIEHFAKLYSQKIGI 258

Query: 79  REDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
           +  +L KTLWGDYYLN KAK+I+KG Q K K PLFV+ VL N+ +LYE V  R K
Sbjct: 259 KPAVLLKTLWGDYYLNTKAKKIMKGDQSKGKKPLFVQLVLDNIWSLYEAVMKRDK 313

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449266720|gb|EMC77737.1| Elongation factor Tu GTP-binding domain-containing protein 1 [Columba livia]

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 74/115 (64%), Positives = 87/115 (75%), Gaps = 1/115 (0%)

Query: 19  STSSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGI 78
           S ++P D +Y DW  GLED DDS LYFSPD GNVVFASA DGWGF I+ FA+LYS K+GI
Sbjct: 200 SDTAPGDQIY-DWSAGLEDTDDSHLYFSPDHGNVVFASAIDGWGFGIEHFAKLYSQKIGI 258

Query: 79  REDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
           +  +L KTLWGDYYLN KAK+I+KG Q K K PLFV+ VL N+ +LYE V  R K
Sbjct: 259 KPAVLLKTLWGDYYLNTKAKKIMKGDQSKGKKPLFVQLVLDNIWSLYEAVMKRDK 313

Source: Columba livia

Species: Columba livia

Genus: Columba

Family: Columbidae

Order: Columbiformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|301621627|ref|XP_002940147.1| PREDICTED: elongation factor Tu GTP-binding domain-containing protein 1-like isoform 2 [Xenopus (Silurana) tropicalis]

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 74/115 (64%), Positives = 89/115 (77%), Gaps = 1/115 (0%)

Query: 19  STSSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGI 78
           S +   D VY DW  GLE+ DDS LYFSPD+GNVVFASA DGWGFTID FA+LYS K+GI
Sbjct: 149 SETVDGDQVY-DWSAGLEETDDSHLYFSPDQGNVVFASAIDGWGFTIDHFAQLYSQKVGI 207

Query: 79  REDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
           +  +L KTLWGDYYLN KAK+I+KGAQ K K PLFV+ +L N+ +LY+ V  R+K
Sbjct: 208 KAAVLLKTLWGDYYLNTKAKKIMKGAQSKGKKPLFVQLILDNLWSLYDAVIKREK 262

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|301621625|ref|XP_002940146.1| PREDICTED: elongation factor Tu GTP-binding domain-containing protein 1-like isoform 1 [Xenopus (Silurana) tropicalis]

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 74/115 (64%), Positives = 89/115 (77%), Gaps = 1/115 (0%)

Query: 19  STSSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGI 78
           S +   D VY DW  GLE+ DDS LYFSPD+GNVVFASA DGWGFTID FA+LYS K+GI
Sbjct: 200 SETVDGDQVY-DWSAGLEETDDSHLYFSPDQGNVVFASAIDGWGFTIDHFAQLYSQKVGI 258

Query: 79  REDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
           +  +L KTLWGDYYLN KAK+I+KGAQ K K PLFV+ +L N+ +LY+ V  R+K
Sbjct: 259 KAAVLLKTLWGDYYLNTKAKKIMKGAQSKGKKPLFVQLILDNLWSLYDAVIKREK 313

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|427791285|gb|JAA61094.1| Putative translation elongation factor 2/ribosome bioproteinsis protein ria1, partial [Rhipicephalus pulchellus]

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/118 (60%), Positives = 93/118 (78%), Gaps = 4/118 (3%)

Query: 19  STSSPS----DTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSA 74
           ST +P+    D +  DW +GL+DADDS LYFSP++GNVVFASAFDGWGF+   FA+LY+ 
Sbjct: 99  STDNPTEKSDDALVFDWTSGLDDADDSTLYFSPEQGNVVFASAFDGWGFSTSHFAQLYAE 158

Query: 75  KLGIREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRK 132
           KLG+++++L KTLWGDYYLNAKAKRILKGAQ K K PLF + +L+N+  +Y+ V  R+
Sbjct: 159 KLGMKKEVLEKTLWGDYYLNAKAKRILKGAQAKCKKPLFAQLILENLWEVYDAVCCRR 216

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427784415|gb|JAA57659.1| Putative elongation factor 2 [Rhipicephalus pulchellus]

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/118 (60%), Positives = 93/118 (78%), Gaps = 4/118 (3%)

Query: 19  STSSPS----DTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSA 74
           ST +P+    D +  DW +GL+DADDS LYFSP++GNVVFASAFDGWGF+   FA+LY+ 
Sbjct: 192 STDNPTEKSDDALVFDWTSGLDDADDSTLYFSPEQGNVVFASAFDGWGFSTSHFAQLYAE 251

Query: 75  KLGIREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRK 132
           KLG+++++L KTLWGDYYLNAKAKRILKGAQ K K PLF + +L+N+  +Y+ V  R+
Sbjct: 252 KLGMKKEVLEKTLWGDYYLNAKAKRILKGAQAKCKKPLFAQLILENLWEVYDAVCCRR 309

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357627397|gb|EHJ77103.1| putative translation elongation factor [Danaus plexippus]

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 69/118 (58%), Positives = 91/118 (77%), Gaps = 5/118 (4%)

Query: 14  RPGPQSTSSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYS 73
           +P P+      D  + DW + LED+DDS+LYFSP++GNVVFASA DGWGFT+  FA+L+S
Sbjct: 199 KPNPKE-----DNNFYDWTSALEDSDDSNLYFSPEQGNVVFASAIDGWGFTVHTFAKLFS 253

Query: 74  AKLGIREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVR 131
            KLG++E++L K LWGD+YLN K KR +KGAQEKAK PLFV+ VL N+  +YET+ +R
Sbjct: 254 DKLGVKEELLTKVLWGDFYLNPKTKRFMKGAQEKAKKPLFVQLVLDNLWNIYETIVLR 311

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340377634|ref|XP_003387334.1| PREDICTED: elongation factor Tu GTP-binding domain-containing protein 1-like [Amphimedon queenslandica]

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 69/116 (59%), Positives = 94/116 (81%), Gaps = 1/116 (0%)

Query: 17  PQSTSSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKL 76
           P ST    + VY +W +G+ +ADDS++YFSP++GNVVFASA DGWGF I+ F +LY+ KL
Sbjct: 223 PASTEDDEEVVY-NWDSGIGEADDSNVYFSPEQGNVVFASAIDGWGFGIEHFVQLYTKKL 281

Query: 77  GIREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRK 132
           G +ED+LRKTLWGD+Y+N+K KRI KGA++K K PLFV+FVL+N+ T+Y+ V V+K
Sbjct: 282 GFKEDVLRKTLWGDFYINSKTKRICKGARDKGKKPLFVQFVLENIWTVYDAVLVKK 337

Source: Amphimedon queenslandica

Species: Amphimedon queenslandica

Genus: Amphimedon

Family: Niphatidae

Order: Haplosclerida

Class: Demospongiae

Phylum: Porifera

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
UNIPROTKB|E1BYW6	1128	EFTUD1 "Uncharacterized protei	0.857	0.101	0.634	8e-35
RGD|1306521	629	Eftud1 "elongation factor Tu G	0.864	0.182	0.594	1.3e-34
UNIPROTKB|Q7Z2Z2	1120	EFTUD1 "Elongation factor Tu G	0.842	0.1	0.601	4.4e-34
UNIPROTKB|F1RID1	493	EFTUD1 "Uncharacterized protei	0.842	0.227	0.601	4.6e-34
UNIPROTKB|I3LSA0	307	I3LSA0 "Uncharacterized protei	0.842	0.364	0.601	4.6e-34
UNIPROTKB|E2R2G9	1128	EFTUD1 "Uncharacterized protei	0.834	0.098	0.605	2e-33
UNIPROTKB|E1BH79	1129	EFTUD1 "Uncharacterized protei	0.842	0.099	0.601	3.2e-33
MGI|MGI:2141969	1127	Eftud1 "elongation factor Tu G	0.842	0.099	0.584	1.4e-32
FB|FBgn0053158	1033	CG33158 [Drosophila melanogast	0.774	0.099	0.524	5.6e-27
POMBASE|SPCC553.08c	1000	SPCC553.08c "GTPase Ria1 (pred	0.766	0.102	0.490	1.9e-21

UNIPROTKB|E1BYW6 EFTUD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 389 (142.0 bits), Expect = 8.0e-35, P = 8.0e-35
 Identities = 73/115 (63%), Positives = 86/115 (74%)

Query:    19 STSSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGI 78
             S ++  D +Y DW  GLED DDS LYFSPD GNVVFASA DGWGF I+ FA+LYS K+GI
Sbjct:   200 SDTAAGDQIY-DWSAGLEDTDDSHLYFSPDHGNVVFASAIDGWGFGIEHFAKLYSQKIGI 258

Query:    79 REDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
             +  +L KTLWGDYYLN KAK+I+KG Q K K PLFV+ VL N+ +LYE V  R K
Sbjct:   259 KPAVLLKTLWGDYYLNTKAKKIMKGDQSKGKKPLFVQLVLDNIWSLYEAVMKRDK 313

GO:0005525 "GTP binding" evidence=IEA

GO:0003924 "GTPase activity" evidence=IEA

GO:0042256 "mature ribosome assembly" evidence=IEA

GO:0043022 "ribosome binding" evidence=IEA

RGD|1306521 Eftud1 "elongation factor Tu GTP binding domain containing 1" [Rattus norvegicus (taxid:10116)]

 Score = 380 (138.8 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 69/116 (59%), Positives = 89/116 (76%)

Query:    18 QSTSSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLG 77
             +S S   D VY DW TGLED DDS LYFSP++GNVVF SA DGWGF I+ FAR+YS K+G
Sbjct:   199 KSHSEQGDQVY-DWSTGLEDVDDSQLYFSPEQGNVVFTSAIDGWGFGIEHFARIYSQKIG 257

Query:    78 IREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
             I++++L KTLWGDYY+N KAK+I+K  Q K K PLFV+ +L+N+ +LY+ V  + K
Sbjct:   258 IKKEVLLKTLWGDYYINMKAKKIMKVDQAKGKKPLFVQLILENIWSLYDAVLKKDK 313

GO:0003924 "GTPase activity" evidence=IEA;ISO

GO:0005525 "GTP binding" evidence=IEA

GO:0006184 "GTP catabolic process" evidence=ISO

GO:0042256 "mature ribosome assembly" evidence=ISO

GO:0043022 "ribosome binding" evidence=ISO

UNIPROTKB|Q7Z2Z2 EFTUD1 "Elongation factor Tu GTP-binding domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 382 (139.5 bits), Expect = 4.4e-34, P = 4.4e-34
 Identities = 68/113 (60%), Positives = 88/113 (77%)

Query:    21 SSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIRE 80
             S   + VY DW TGLED DDS LYFSP++GNVVF SA DGWGF I+ FAR+YS K+GI++
Sbjct:   202 SEQGEQVY-DWSTGLEDTDDSHLYFSPEQGNVVFTSAIDGWGFGIEHFARIYSQKIGIKK 260

Query:    81 DILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
             ++L KTLWGDYY+N KAK+I+KG Q K K PLFV+ +L+N+ +LY+ V  + K
Sbjct:   261 EVLMKTLWGDYYINMKAKKIMKGDQAKGKKPLFVQLILENIWSLYDAVLKKDK 313

GO:0003746 "translation elongation factor activity" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0003924 "GTPase activity" evidence=IDA

GO:0006184 "GTP catabolic process" evidence=IDA

GO:0042256 "mature ribosome assembly" evidence=IMP

GO:0043022 "ribosome binding" evidence=IMP

UNIPROTKB|F1RID1 EFTUD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 68/113 (60%), Positives = 85/113 (75%)

Query:    21 SSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIRE 80
             S   + VY DW TGLED DDS LYFSPD+GNVVF SA DGWGF I+ FA++YS K GIR+
Sbjct:   202 SEQGEQVY-DWSTGLEDTDDSHLYFSPDQGNVVFTSAIDGWGFGIEHFAKIYSQKTGIRK 260

Query:    81 DILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
             ++L KTLWGDYY+N KAK+I+K  Q K K PLFV+ +L N+ +LY+ V  + K
Sbjct:   261 EVLLKTLWGDYYINMKAKKIMKVDQAKGKKPLFVQLILGNIWSLYDAVLKKDK 313

GO:0005525 "GTP binding" evidence=IEA

GO:0003924 "GTPase activity" evidence=IEA

UNIPROTKB|I3LSA0 I3LSA0 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 68/113 (60%), Positives = 85/113 (75%)

Query:    21 SSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIRE 80
             S   + VY DW TGLED DDS LYFSPD+GNVVF SA DGWGF I+ FA++YS K GIR+
Sbjct:    87 SEQGEQVY-DWSTGLEDTDDSHLYFSPDQGNVVFTSAIDGWGFGIEHFAKIYSQKTGIRK 145

Query:    81 DILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
             ++L KTLWGDYY+N KAK+I+K  Q K K PLFV+ +L N+ +LY+ V  + K
Sbjct:   146 EVLLKTLWGDYYINMKAKKIMKVDQAKGKKPLFVQLILGNIWSLYDAVLKKDK 198

GO:0005525 "GTP binding" evidence=IEA

GO:0003924 "GTPase activity" evidence=IEA

UNIPROTKB|E2R2G9 EFTUD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 376 (137.4 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 69/114 (60%), Positives = 89/114 (78%)

Query:    20 TSSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIR 79
             +S P + VY DW TGLED DDS LYFSPD+GNVVF SA DGWGF ++ FA +YS K+GI+
Sbjct:   201 SSEPGEQVY-DWSTGLEDTDDSHLYFSPDQGNVVFTSALDGWGFGVEHFATIYSQKIGIK 259

Query:    80 EDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
             +++L KTLWGDYY+N KAK+I+K  Q K K PLFV+ +L+N+ +LY+  AV KK
Sbjct:   260 KEVLLKTLWGDYYINMKAKKIMKVDQAKGKKPLFVQLILENIWSLYD--AVLKK 311

GO:0043022 "ribosome binding" evidence=IEA

GO:0042256 "mature ribosome assembly" evidence=IEA

GO:0003924 "GTPase activity" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

UNIPROTKB|E1BH79 EFTUD1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 374 (136.7 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 68/113 (60%), Positives = 86/113 (76%)

Query:    21 SSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIRE 80
             S   + VY DW TGLED DDS LYFSPD+GNVVF SA DGWGF I+ FA++YS K GIR+
Sbjct:   202 SEQGEQVY-DWSTGLEDTDDSHLYFSPDQGNVVFTSAIDGWGFGIEHFAKIYSQKTGIRK 260

Query:    81 DILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
             ++L KTLWGDYY+N KAK+I+K  Q K K PLFV+ +L+N+ +LY+ V  + K
Sbjct:   261 EVLLKTLWGDYYINTKAKKIMKVDQAKGKKPLFVQLILENIWSLYDAVLKKDK 313

GO:0043022 "ribosome binding" evidence=IEA

GO:0042256 "mature ribosome assembly" evidence=IEA

GO:0003924 "GTPase activity" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

MGI|MGI:2141969 Eftud1 "elongation factor Tu GTP binding domain containing 1" [Mus musculus (taxid:10090)]

 Score = 368 (134.6 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 66/113 (58%), Positives = 86/113 (76%)

Query:    21 SSPSDTVYTDWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIRE 80
             S   + VY DW  GLED DDS LYFSP++GNVVF SA DGWGF I+ FAR+YS K+GI++
Sbjct:   202 SEQGEQVY-DWSAGLEDVDDSQLYFSPEQGNVVFTSAIDGWGFGIEHFARIYSQKIGIKK 260

Query:    81 DILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
             ++L KTLWGDYY+N KAK+I+K  Q K K PLFV+ +L+N+ +LY+ V  + K
Sbjct:   261 EVLLKTLWGDYYINMKAKKIMKVDQAKGKKPLFVQLILENIWSLYDAVLKKDK 313

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003746 "translation elongation factor activity" evidence=IEA

GO:0003924 "GTPase activity" evidence=ISO

GO:0005525 "GTP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006184 "GTP catabolic process" evidence=ISO

GO:0006412 "translation" evidence=IEA

GO:0006414 "translational elongation" evidence=IEA

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0042256 "mature ribosome assembly" evidence=ISO

GO:0043022 "ribosome binding" evidence=ISO

FB|FBgn0053158 CG33158 [Drosophila melanogaster (taxid:7227)]

 Score = 315 (115.9 bits), Expect = 5.6e-27, P = 5.6e-27
 Identities = 54/103 (52%), Positives = 77/103 (74%)

Query:    30 DWGTGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWG 89
             ++ + LE+ DDS+LYFSP  GNV+F SA+DGW F++ DFA +Y+ +L +    L   LWG
Sbjct:   201 NYESALEEVDDSELYFSPSSGNVIFCSAYDGWAFSVRDFAAMYAKRLEMSRKDLENVLWG 260

Query:    90 DYYLNAKAKRILKGAQEKAKAPLFVEFVLKNVVTLYETVAVRK 132
             D+Y N+K K  L GAQEKAK P+FV+FVL+N+ +LY+ +A+RK
Sbjct:   261 DFYYNSKKKEALPGAQEKAKKPMFVQFVLENIWSLYDIIAIRK 303

GO:0006414 "translational elongation" evidence=ISS

GO:0005850 "eukaryotic translation initiation factor 2 complex" evidence=ISS

GO:0003746 "translation elongation factor activity" evidence=ISS

GO:0003924 "GTPase activity" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

POMBASE|SPCC553.08c SPCC553.08c "GTPase Ria1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 263 (97.6 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 53/108 (49%), Positives = 73/108 (67%)

Query:    26 TVYTDWGTGLEDADD--SD--LYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIRED 81
             T YT     L D D+  SD  +YF+P++GNVVFASA+DGW F +D F+  Y  KLG+++ 
Sbjct:   187 TFYTGELMQLADNDEVISDEGIYFAPEQGNVVFASAYDGWAFCLDQFSEFYEKKLGLKQK 246

Query:    82 ILRKTLWGDYYLNAKAKRIL--KGAQEKAKAPLFVEFVLKNVVTLYET 127
              L K LWGDYYL+ K KR+L  K  Q +   P+FV+FVL+N+  +YE+
Sbjct:   247 ALTKCLWGDYYLDPKTKRVLQPKHLQGRRLKPMFVQFVLENLWAVYES 294

GO:0003924 "GTPase activity" evidence=ISO

GO:0005525 "GTP binding" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0042254 "ribosome biogenesis" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8C0D5	ETUD1_MOUSE	No assigned EC number	0.6018	0.8045	0.0949	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	133
PTZ00416	836	PTZ00416, PTZ00416, elongation factor 2; Provision	3e-22
PLN00116	843	PLN00116, PLN00116, translation elongation factor	1e-13
cd01885	218	cd01885, EF2, Elongation Factor 2 (EF2) in archaea	3e-13
cd04167	213	cd04167, Snu114p, Snu114p, a spliceosome protein,	3e-06
PRK07560	731	PRK07560, PRK07560, elongation factor EF-2; Review	5e-04

>gnl|CDD|240409 PTZ00416, PTZ00416, elongation factor 2; Provisional

 Score = 90.5 bits (225), Expect = 3e-22
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 36  EDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNA 95
            D    D+   P++G V F S   GW FT+  FAR+Y+ K G+ E  + + LWGD + +A
Sbjct: 187 NDELMGDVQVYPEKGTVAFGSGLQGWAFTLTTFARIYAKKFGVEESKMMERLWGDNFFDA 246

Query: 96  KAKRILK---GAQEKAKAPLFVEFVLKNVVTLYETV 128
           K K+ +K    AQ K     F +F+L  +  L++ V
Sbjct: 247 KTKKWIKDETNAQGKKLKRAFCQFILDPICQLFDAV 282

Length = 836

>gnl|CDD|177730 PLN00116, PLN00116, translation elongation factor EF-2 subunit; Provisional

 Score = 65.9 bits (161), Expect = 1e-13
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 36  EDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNA 95
           ED    D+   P++G V F++   GW FT+ +FA++Y++K G+ E  + + LWG+ + + 
Sbjct: 193 EDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDP 252

Query: 96  KAKRILKGAQEKAKAPL-FVEFVLKNVVTLYETVAVRKK 133
             K+              FV+F  + +  +  T    +K
Sbjct: 253 ATKKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQK 291

Length = 843

>gnl|CDD|206672 cd01885, EF2, Elongation Factor 2 (EF2) in archaea and eukarya

 Score = 63.4 bits (155), Expect = 3e-13
 Identities = 20/38 (52%), Positives = 24/38 (63%)

Query: 36  EDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYS 73
           E+       FSP +GNV F SA DGWGFTI  FA +Y+
Sbjct: 169 EEFKQEKWKFSPQKGNVAFGSALDGWGFTIIKFADIYA 206

Translocation requires hydrolysis of a molecule of GTP and is mediated by EF-G in bacteria and by eEF2 in eukaryotes. The eukaryotic elongation factor eEF2 is a GTPase involved in the translocation of the peptidyl-tRNA from the A site to the P site on the ribosome. The 95-kDa protein is highly conserved, with 60% amino acid sequence identity between the human and yeast proteins. Two major mechanisms are known to regulate protein elongation and both involve eEF2. First, eEF2 can be modulated by reversible phosphorylation. Increased levels of phosphorylated eEF2 reduce elongation rates presumably because phosphorylated eEF2 fails to bind the ribosomes. Treatment of mammalian cells with agents that raise the cytoplasmic Ca2+ and cAMP levels reduce elongation rates by activating the kinase responsible for phosphorylating eEF2. In contrast, treatment of cells with insulin increases elongation rates by promoting eEF2 dephosphorylation. Second, the protein can be post-translationally modified by ADP-ribosylation. Various bacterial toxins perform this reaction after modification of a specific histidine residue to diphthamide, but there is evidence for endogenous ADP ribosylase activity. Similar to the bacterial toxins, it is presumed that modification by the endogenous enzyme also inhibits eEF2 activity. Length = 218

>gnl|CDD|206730 cd04167, Snu114p, Snu114p, a spliceosome protein, is a GTPase

 Score = 44.2 bits (105), Expect = 3e-06
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 40  DSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYS 73
                 SP+ GNV+FAS+  G+ FT++ FA+ Y 
Sbjct: 168 TEGFLVSPELGNVLFASSKFGFCFTLESFAKKYG 201

Snu114p subfamily. Snu114p is one of several proteins that make up the U5 small nuclear ribonucleoprotein (snRNP) particle. U5 is a component of the spliceosome, which catalyzes the splicing of pre-mRNA to remove introns. Snu114p is homologous to EF-2, but typically contains an additional N-terminal domain not found in Ef-2. This protein is part of the GTP translation factor family and the Ras superfamily, characterized by five G-box motifs. Length = 213

>gnl|CDD|236047 PRK07560, PRK07560, elongation factor EF-2; Reviewed

 Score = 38.3 bits (90), Expect = 5e-04
 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 19/78 (24%)

Query: 46  SPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIR-EDILRKTLWGDYYLNAKAKRILKGA 104
             + G V F SA   W  ++         K GI+ +DI+      DYY   K K + +  
Sbjct: 193 DVEDGTVAFGSALYNWAISVP-----MMQKTGIKFKDII------DYYEKGKQKELAE-- 239

Query: 105 QEKAKAPLFVEFVLKNVV 122
               KAPL  E VL  VV
Sbjct: 240 ----KAPLH-EVVLDMVV 252

Length = 731

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	133
KOG0469|consensus	842		99.96
KOG0468|consensus	971		99.93
KOG0467|consensus	887		99.89
PLN00116	843	translation elongation factor EF-2 subunit; Provis	99.78
PTZ00416	836	elongation factor 2; Provisional	99.72
cd01885	222	EF2 EF2 (for archaea and eukarya). Translocation r	99.08
cd04167	213	Snu114p Snu114p subfamily. Snu114p is one of sever	98.33
PRK07560	731	elongation factor EF-2; Reviewed	95.03
TIGR00490	720	aEF-2 translation elongation factor aEF-2. This mo	94.22

>KOG0469|consensus

Probab=99.96  E-value=6.9e-30  Score=227.11  Aligned_cols=101  Identities=31%  Similarity=0.635  Sum_probs=91.3

Q ss_pred             CccccCCCCCeeEecCCCceEeeecccceeeehhHHHHHHHhhcCCCHHHHHHhhhcccceecCCCcEecCCCc---CCC
Q psy2610          33 TGLEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRILKGAQE---KAK  109 (133)
Q Consensus        33 ~~~~~~~~~~~~fsP~~GNV~FaSal~GW~Ftl~~FA~~Y~~K~gi~~~~L~k~LWGD~Yyd~ktKk~~~~~~~---~~~  109 (133)
                      +++.+....+.++.|++|+|.||||||||+|||+|||++|++|||++..+|+++||||.|||+++|+|.++...   +..
T Consensus       190 sTy~d~~~g~~~v~P~kg~v~F~SGLhGWaFTlrQFa~~Y~~KF~~~~~kmm~~LWg~~~f~~ktkk~~~s~t~~~gn~~  269 (842)
T KOG0469|consen  190 STYGDGPMGDVQVDPEKGTVGFGSGLHGWAFTLRQFAEMYAKKFGIDVRKMMNRLWGDNFFNPKTKKWSKSATDAEGNPL  269 (842)
T ss_pred             EecccCCcCceEecCCCCceeeccccchhhhhHHHHHHHHHHHhCCcHHHHHHHhhcccccCccCCcccccccccccCcc
Confidence            45666677889999999999999999999999999999999999999999999999999999999999977532   223


Q ss_pred             CchhhHHhHHHHHHHHHHHhccCC
Q psy2610         110 APLFVEFVLKNVVTLYETVAVRKK  133 (133)
Q Consensus       110 kr~FVqfILePI~kIy~~v~~~~~  133 (133)
                      +|.||+|||+|||++|++||+-+|
T Consensus       270 ~r~F~~~iLdPIykvfdaimN~kk  293 (842)
T KOG0469|consen  270 RRAFCMFILDPIYKVFDAIMNFKK  293 (842)
T ss_pred             ccceeEEeechHHHHHHHHhhccH
Confidence            789999999999999999997664

>KOG0468|consensus

Probab=99.93  E-value=4e-26  Score=207.05  Aligned_cols=92  Identities=35%  Similarity=0.621  Sum_probs=85.4

Q ss_pred             CCeeEecCCCceEeeecccceeeehhHHHHHHHhhcC-CCHHHHHHhhhcccceecCCCcEecCCCcCCCCchhhHHhHH
Q psy2610          41 SDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLG-IREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVLK  119 (133)
Q Consensus        41 ~~~~fsP~~GNV~FaSal~GW~Ftl~~FA~~Y~~K~g-i~~~~L~k~LWGD~Yyd~ktKk~~~~~~~~~~kr~FVqfILe  119 (133)
                      ....+||..|||||||+..||||||.+||++|++..| ++.+.|++|||||.||+++|+||.++++....+|+||+|||+
T Consensus       295 ~~~~~sP~~gNvcFaS~~~g~cFtl~sFak~Y~~~~~~~~~d~Fa~RLWGdvYf~~ktrkF~kk~~~~~~~rsFVeFILe  374 (971)
T KOG0468|consen  295 DNPVVSPILGNVCFASGKLGFCFTLKSFAKLYADAHGHIDVDDFAKRLWGDVYFHSKTRKFVKKPPDGSGSRSFVEFILE  374 (971)
T ss_pred             cccccccccCceeeeccccceeeehHHHHHHHHHhcCCcchhhhhhhhhccccccccccccccCCCCCcccchhhhhhHh
Confidence            5678999999999999999999999999999999864 789999999999999999999999998776668999999999


Q ss_pred             HHHHHHHHHhccC
Q psy2610         120 NVVTLYETVAVRK  132 (133)
Q Consensus       120 PI~kIy~~v~~~~  132 (133)
                      |+|||+..++...
T Consensus       375 PlYKi~sq~igd~  387 (971)
T KOG0468|consen  375 PLYKIFSQVIGDE  387 (971)
T ss_pred             HHHHHHHHHhcch
Confidence            9999999998754

>KOG0467|consensus

Probab=99.89  E-value=3.4e-24  Score=195.79  Aligned_cols=93  Identities=48%  Similarity=0.976  Sum_probs=87.6

Q ss_pred             CCCCeeEecCCCceEeeecccceeeehhHHHHHHHhhcCCCHHHHHHhhhcccceecCCCcEecCCCcCCCCchhhHHhH
Q psy2610          39 DDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRILKGAQEKAKAPLFVEFVL  118 (133)
Q Consensus        39 ~~~~~~fsP~~GNV~FaSal~GW~Ftl~~FA~~Y~~K~gi~~~~L~k~LWGD~Yyd~ktKk~~~~~~~~~~kr~FVqfIL  118 (133)
                      .++..+|+|++|||+||||++||+|.+++||++|++|+|.+.+.|.+.||||+|+++++|++....+-+|++|+|+||||
T Consensus       181 ~d~~~~F~p~kgNVif~~A~~~~~f~~~~fak~~~~kl~~k~~al~k~lwgd~y~~~ktk~I~~~~~~~grkplf~~~vl  260 (887)
T KOG0467|consen  181 EDEEITFGPEDGNVIFASALDGWGFGIEQFAKFYAKKLGLKDAALLKFLWGDRYIDPKTKRICEGKKLKGRKPLFVQFVL  260 (887)
T ss_pred             hhcceeecCCCCcEEEEEecccccccHHHHHHHHHHhcChhhhhhhhhhccceeecchhhhhhcccCcccCCCccceeeh
Confidence            37789999999999999999999999999999999999999999999999999999999999988877788999999999


Q ss_pred             HHHHHHHHHHhcc
Q psy2610         119 KNVVTLYETVAVR  131 (133)
Q Consensus       119 ePI~kIy~~v~~~  131 (133)
                      +|||+||+.+...
T Consensus       261 e~lw~iy~~~~~~  273 (887)
T KOG0467|consen  261 ENLWRIYELALKS  273 (887)
T ss_pred             hhHHHHHHHHhcc
Confidence            9999999976644

>PLN00116 translation elongation factor EF-2 subunit; Provisional

Probab=99.78  E-value=3.5e-19  Score=164.30  Aligned_cols=91  Identities=25%  Similarity=0.626  Sum_probs=81.4

Q ss_pred             CCeeEecCCCceEeeecccceeeehhHHHHHHHhhcCCCHHHHHHhhhcccceecCCCcEecCCC-cCCCCchhhHHhHH
Q psy2610          41 SDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRILKGAQ-EKAKAPLFVEFVLK  119 (133)
Q Consensus        41 ~~~~fsP~~GNV~FaSal~GW~Ftl~~FA~~Y~~K~gi~~~~L~k~LWGD~Yyd~ktKk~~~~~~-~~~~kr~FVqfILe  119 (133)
                      ++++|+|.+|||+|||+++||+|++++||.+|+.|++++.+.|.++||||+||+++++++...+. ..+.++.|++|||+
T Consensus       198 ~~~~~~P~~~nv~F~s~~~~~~~~l~~~~~~y~~~~~~~~~~l~~~lwg~~~~~~~~~~~~~~~~~~~~~~~~f~~~il~  277 (843)
T PLN00116        198 GDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSPTCKRGFVQFCYE  277 (843)
T ss_pred             CceEEccCCCeeeeeecccCEEEEhHHHHHHHHHHhCCcHHHHHHHhhccceEcCCCceEEecCCCCchhhHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999999999998877652 33346789999999


Q ss_pred             HHHHHHHHHhcc
Q psy2610         120 NVVTLYETVAVR  131 (133)
Q Consensus       120 PI~kIy~~v~~~  131 (133)
                      |+|++|++++..
T Consensus       278 ~~~~l~e~v~~~  289 (843)
T PLN00116        278 PIKQIINTCMND  289 (843)
T ss_pred             HHHHHHHHHHhc
Confidence            999999998743

>PTZ00416 elongation factor 2; Provisional

Probab=99.72  E-value=1.3e-17  Score=153.84  Aligned_cols=89  Identities=35%  Similarity=0.784  Sum_probs=79.2

Q ss_pred             CeeEecCCCceEeeecccceeeehhHHHHHHHhhcCCCHHHHHHhhhcccceecCCCcEecCCCc---CCCCchhhHHhH
Q psy2610          42 DLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRILKGAQE---KAKAPLFVEFVL  118 (133)
Q Consensus        42 ~~~fsP~~GNV~FaSal~GW~Ftl~~FA~~Y~~K~gi~~~~L~k~LWGD~Yyd~ktKk~~~~~~~---~~~kr~FVqfIL  118 (133)
                      +++|+|..|||.|+|+.+||+|||++|+.+|+++|+++...|.+.||||+||+++++++...+..   ...+++|++|+|
T Consensus       193 ~~~~~p~~~~vp~~s~~~~~~f~~~~F~~~y~~~~~~~~~~l~~~~wg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~  272 (836)
T PTZ00416        193 DVQVYPEKGTVAFGSGLQGWAFTLTTFARIYAKKFGVEESKMMERLWGDNFFDAKTKKWIKDETNAQGKKLKRAFCQFIL  272 (836)
T ss_pred             ceecceeccEEEEEeccccceeehHHhhhhhhhhcCCcHHHHHHHHhccccccCCCCEEEeccCCccccccchHHHHHHH
Confidence            46799999999999999999999999999999999999999999999999999998888765311   123789999999


Q ss_pred             HHHHHHHHHHhc
Q psy2610         119 KNVVTLYETVAV  130 (133)
Q Consensus       119 ePI~kIy~~v~~  130 (133)
                      +|+|++|++++.
T Consensus       273 ~~~~~l~e~~~~  284 (836)
T PTZ00416        273 DPICQLFDAVMN  284 (836)
T ss_pred             HHHHHHHHHHHh
Confidence            999999998864

>cd01885 EF2 EF2 (for archaea and eukarya)

Probab=99.08  E-value=4.8e-11  Score=95.35  Aligned_cols=34  Identities=62%  Similarity=1.221  Sum_probs=31.5

Q ss_pred             CCCeeEecCCCceEeeecccceeeehhHHHHHHH
Q psy2610          40 DSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYS   73 (133)
Q Consensus        40 ~~~~~fsP~~GNV~FaSal~GW~Ftl~~FA~~Y~   73 (133)
                      ++++.|||++|||+||||++|||||+++||++|.
T Consensus       177 ~~~~~~~p~~gnv~f~S~~~gw~f~~~~f~~~~~  210 (222)
T cd01885         177 DEKWYFSPQKGNVAFGSALHGWGFTIIKFARIYA  210 (222)
T ss_pred             cCCcEEeeCCCcEEEEecccCEEeccccccchHH
Confidence            4567899999999999999999999999999994

Translocation requires hydrolysis of a molecule of GTP and is mediated by EF-G in bacteria and by eEF2 in eukaryotes. The eukaryotic elongation factor eEF2 is a GTPase involved in the translocation of the peptidyl-tRNA from the A site to the P site on the ribosome. The 95-kDa protein is highly conserved, with 60% amino acid sequence identity between the human and yeast proteins. Two major mechanisms are known to regulate protein elongation and both involve eEF2. First, eEF2 can be modulated by reversible phosphorylation. Increased levels of phosphorylated eEF2 reduce elongation rates presumably because phosphorylated eEF2 fails to bind the ribosomes. Treatment of mammalian cells with agents that raise the cytoplasmic Ca2+ and cAMP levels reduce elongation rates by activating the kinase responsible for phosphorylating eEF2. In contrast, treatment of cells with insulin increases elongation rates by promoting eEF2 dephosphorylation. Seco

>cd04167 Snu114p Snu114p subfamily

Probab=98.33  E-value=3.9e-07  Score=70.67  Aligned_cols=32  Identities=47%  Similarity=0.863  Sum_probs=29.9

Q ss_pred             CeeEecCCCceEeeecccceeeehhHHHHHHH
Q psy2610          42 DLYFSPDRGNVVFASAFDGWGFTIDDFARLYS   73 (133)
Q Consensus        42 ~~~fsP~~GNV~FaSal~GW~Ftl~~FA~~Y~   73 (133)
                      ++.|.|.++||+|+||++||+|++.+||++|.
T Consensus       170 ~~~~~p~~~nv~~~s~~~~w~~~~~~~~~~~~  201 (213)
T cd04167         170 SFLFSPENGNVCFASSKFGFCFTLESFAKKYG  201 (213)
T ss_pred             ceEeccCCCeEEEEecCCCeEEecHHHHhhhh
Confidence            36799999999999999999999999999993

Snu114p is one of several proteins that make up the U5 small nuclear ribonucleoprotein (snRNP) particle. U5 is a component of the spliceosome, which catalyzes the splicing of pre-mRNA to remove introns. Snu114p is homologous to EF-2, but typically contains an additional N-terminal domain not found in Ef-2. This protein is part of the GTP translation factor family and the Ras superfamily, characterized by five G-box motifs.

>PRK07560 elongation factor EF-2; Reviewed

Probab=95.03  E-value=0.027  Score=52.07  Aligned_cols=30  Identities=20%  Similarity=0.452  Sum_probs=26.3

Q ss_pred             CeeEecCCCceEeeecccceeeehhHHHHH
Q psy2610          42 DLYFSPDRGNVVFASAFDGWGFTIDDFARL   71 (133)
Q Consensus        42 ~~~fsP~~GNV~FaSal~GW~Ftl~~FA~~   71 (133)
                      .+.++|.+|||+|+||++||+|+++.+.+.
T Consensus       189 ~~~~~~~~~~v~~~sa~~~~~~~~~~~~~~  218 (731)
T PRK07560        189 KWKVDVEDGTVAFGSALYNWAISVPMMQKT  218 (731)
T ss_pred             ceeecCCCCcEeeeecccccceeHHHHHHh
Confidence            567899999999999999999999977553

>TIGR00490 aEF-2 translation elongation factor aEF-2

Probab=94.22  E-value=0.019  Score=53.10  Aligned_cols=30  Identities=20%  Similarity=0.540  Sum_probs=26.5

Q ss_pred             CCeeEecCCCceEeeecccceeeehhHHHH
Q psy2610          41 SDLYFSPDRGNVVFASAFDGWGFTIDDFAR   70 (133)
Q Consensus        41 ~~~~fsP~~GNV~FaSal~GW~Ftl~~FA~   70 (133)
                      +.+.++|+.|||+|+|++++|+|++++|.+
T Consensus       187 ~~~~~~~~~~~~~f~s~~~~~~~~~~~~~~  216 (720)
T TIGR00490       187 DKWKVRVEDGSVAFGSAYYNWAISVPSMKK  216 (720)
T ss_pred             hceEechhhCCHHHHhhhhcccccchhHhh
Confidence            346799999999999999999999998843

This model represents archaeal elongation factor 2, a protein more similar to eukaryotic EF-2 than to bacterial EF-G, both in sequence similarity and in sharing with eukaryotes the property of having a diphthamide (modified His) residue at a conserved position. The diphthamide can be ADP-ribosylated by diphtheria toxin in the presence of NAD.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	133
1n0v_C	842	Crystal Structure Of Elongation Factor 2 Length = 8		3e-10
1u2r_A	842	Crystal Structure Of Adp-Ribosylated Ribosomal Tran		4e-09

>pdb|1N0V|C Chain C, Crystal Structure Of Elongation Factor 2 Length = 842

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 42  DLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRIL 101
           D+   P RG V F S   GW FTI  FA  Y+ K G+ +  +   LWGD + N K K+  
Sbjct: 199 DVQVYPARGTVAFGSGLHGWAFTIRQFATRYAKKFGVDKAKMMDRLWGDSFFNPKTKKWT 258
Query: 102 KGAQEKAKAPL---FVEFVLKNVVTLYETVAVRKK 133
               +    PL   F  F+L  +  L+  +   KK
Sbjct: 259 NKDTDAEGKPLERAFNMFILDPIFRLFTAIMNFKK 293

>pdb|1U2R|A Chain A, Crystal Structure Of Adp-Ribosylated Ribosomal Translocase From Saccharomyces Cerevisiae Length = 842

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 42  DLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRIL 101
           D+   P RG V F S   GW FTI  FA  Y+ K G+ +  +   LWGD + N K K+  
Sbjct: 199 DVQVYPARGTVAFGSGLHGWAFTIRQFATRYAKKFGVDKAKMMDRLWGDSFFNPKTKKWT 258
Query: 102 KGAQEKAKAPL---FVEFVLKNVVTLYETVAVRKK 133
               +    PL   F  F+L  +  L+  +   KK
Sbjct: 259 NKDTDAEGKPLERAFNMFILDPIFRLFTAIMNFKK 293

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	133
1n0u_A	842	EF-2, elongation factor 2; G-protein, CIS-proline,	4e-23

>1n0u_A EF-2, elongation factor 2; G-protein, CIS-proline, translation; HET: SO1; 2.12A {Saccharomyces cerevisiae} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1n0v_C 1s1h_T 2e1r_A* 2npf_A* 2p8w_T* 3dny_T 3b82_A* 1zm2_A* 1zm3_A* 1zm4_A* 1zm9_A* 2p8x_T* 2p8y_T* 2p8z_T* 2zit_A* 1u2r_A* 3b78_A* 3b8h_A* Length = 842

 Score = 92.4 bits (229), Expect = 4e-23
 Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 3/102 (2%)

Query: 35  LEDADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLN 94
             D    D+   P RG V F S   GW FTI  FA  Y+ K G+ +  +   LWGD + N
Sbjct: 192 YADEVLGDVQVYPARGTVAFGSGLHGWAFTIRQFATRYAKKFGVDKAKMMDRLWGDSFFN 251

Query: 95  AKAKRILKG---AQEKAKAPLFVEFVLKNVVTLYETVAVRKK 133
            K K+       A+ K     F  F+L  +  L+  +   KK
Sbjct: 252 PKTKKWTNKDTDAEGKPLERAFNMFILDPIFRLFTAIMNFKK 293

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	133
1n0u_A	842	EF-2, elongation factor 2; G-protein, CIS-proline,	99.63

>1n0u_A EF-2, elongation factor 2; G-protein, CIS-proline, translation; HET: SO1; 2.12A {Saccharomyces cerevisiae} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1n0v_C 1s1h_T 2e1r_A* 2npf_A* 2p8w_T* 3dny_T 3b82_A* 1zm2_A* 1zm3_A* 1zm4_A* 1zm9_A* 2p8x_T* 2p8y_T* 2p8z_T* 2zit_A* 1u2r_A* 3b78_A* 3b8h_A*

Probab=99.63  E-value=5.6e-16  Score=141.19  Aligned_cols=90  Identities=31%  Similarity=0.655  Sum_probs=80.1

Q ss_pred             CCeeEecCCCceEeeecccceeeehhHHHHHHHhhcCCCHHHHHHhhhcccceecCCCcEecCC-CcCC--CCchhhHHh
Q psy2610          41 SDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRILKGA-QEKA--KAPLFVEFV  117 (133)
Q Consensus        41 ~~~~fsP~~GNV~FaSal~GW~Ftl~~FA~~Y~~K~gi~~~~L~k~LWGD~Yyd~ktKk~~~~~-~~~~--~kr~FVqfI  117 (133)
                      +++.++|..++|.|+||++||+|++.+||++|+++|+++.+.|.+++|||+||+++++++...+ +..+  .+|+|++++
T Consensus       198 ~~~~~~p~~~~v~~~sa~~g~~~~~~~f~~~y~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~f~~~~  277 (842)
T 1n0u_A          198 GDVQVYPARGTVAFGSGLHGWAFTIRQFATRYAKKFGVDKAKMMDRLWGDSFFNPKTKKWTNKDTDAEGKPLERAFNMFI  277 (842)
T ss_dssp             CCCCCCGGGTCEEEEETTTTEEEEHHHHHHHHHTTTTSCHHHHHHHTSSSCEEETTTTEEESCSBCTTCCBCCBHHHHHT
T ss_pred             CceeeceEEeeeEEeecccccccchhhhhhhcchhcCCCHHHHHHHHhccccccCCCCeEEEecCCchhhhhhHHHHHHH
Confidence            4567899999999999999999999999999999999999999999999999999888888754 2222  268999999


Q ss_pred             HHHHHHHHHHHhc
Q psy2610         118 LKNVVTLYETVAV  130 (133)
Q Consensus       118 LePI~kIy~~v~~  130 (133)
                      ++|+|+|+++++.
T Consensus       278 ~~~~~~l~e~~~~  290 (842)
T 1n0u_A          278 LDPIFRLFTAIMN  290 (842)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	133
d1n0ua2	341	c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-	2e-27

>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 341

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: G proteins
domain: Elongation factor 2 (eEF-2), N-terminal (G) domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  101 bits (253), Expect = 2e-27
 Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 3/100 (3%)

Query: 37  DADDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAK 96
           D    D+   P RG V F S   GW FTI  FA  Y+ K G+ +  +   LWGD + N K
Sbjct: 192 DEVLGDVQVYPARGTVAFGSGLHGWAFTIRQFATRYAKKFGVDKAKMMDRLWGDSFFNPK 251

Query: 97  AKRILKGAQEKAKAPL---FVEFVLKNVVTLYETVAVRKK 133
            K+      +    PL   F  F+L  +  L+  +   KK
Sbjct: 252 TKKWTNKDTDAEGKPLERAFNMFILDPIFRLFTAIMNFKK 291

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	133
d1n0ua2	341	Elongation factor 2 (eEF-2), N-terminal (G) domain	99.97

>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: G proteins
domain: Elongation factor 2 (eEF-2), N-terminal (G) domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=6.1e-32  Score=224.26  Aligned_cols=94  Identities=31%  Similarity=0.602  Sum_probs=85.4

Q ss_pred             CCCCeeEecCCCceEeeecccceeeehhHHHHHHHhhcCCCHHHHHHhhhcccceecCCCcEecCCCcCC---CCchhhH
Q psy2610          39 DDSDLYFSPDRGNVVFASAFDGWGFTIDDFARLYSAKLGIREDILRKTLWGDYYLNAKAKRILKGAQEKA---KAPLFVE  115 (133)
Q Consensus        39 ~~~~~~fsP~~GNV~FaSal~GW~Ftl~~FA~~Y~~K~gi~~~~L~k~LWGD~Yyd~ktKk~~~~~~~~~---~kr~FVq  115 (133)
                      ..+++.|+|++|||+||||++||+||+++||++|++|+|++.++|.++||||+|||+++|+|.+++....   .+|+|||
T Consensus       194 ~~~~~~~~P~~gnV~FaSa~~g~~Ftl~~fa~~y~~k~~~~~~~l~~~LWGd~y~~~~~kk~~~~~~~~~~~~lk~~FVq  273 (341)
T d1n0ua2         194 VLGDVQVYPARGTVAFGSGLHGWAFTIRQFATRYAKKFGVDKAKMMDRLWGDSFFNPKTKKWTNKDTDAEGKPLERAFNM  273 (341)
T ss_dssp             GGCCCCCCGGGTCEEEEETTTTEEEEHHHHHHHHHTTTTSCHHHHHHHTSSSCEEETTTTEEESCSBCTTCCBCCBHHHH
T ss_pred             cccccccCcccCceEecccccCeEEeeHHHHHHHHHHhCCCHHHHHHHhccCcccccccceeeccCCcccCCcccceeee
Confidence            3456789999999999999999999999999999999999999999999999999999999998765322   3799999


Q ss_pred             HhHHHHHHHHHHHhccC
Q psy2610         116 FVLKNVVTLYETVAVRK  132 (133)
Q Consensus       116 fILePI~kIy~~v~~~~  132 (133)
                      |||+||||||.+++..+
T Consensus       274 fILepI~ki~~~~~~~~  290 (341)
T d1n0ua2         274 FILDPIFRLFTAIMNFK  290 (341)
T ss_dssp             HTHHHHHHHHHHHHTTC
T ss_pred             eeHHHHHHHHHHHhhcc
Confidence            99999999999998654