Psyllid ID: psy2644

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MEPVPKHNVVSNAVNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL
Secondary Structure (PSIPRED)
cccccccccccccccccccccEEEccccEEEEcccccHHHHHHHHHHHHHHccccEEEEccEEEEEEEccccccccEEEEEEEEEEccccEEEEEEEEEcccHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccEEEEEEEEEEcccccHHHHHHHHHHHHHHccccccccccEEEEEEcccccccccEEEEEEEEEccccccccEEEEEEcccHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mepvpkhnvvsnavnddqvkprslrftwsmkttssrdpnEIMAEIRKVLDANNCDYEQRERFLLLCvhgdpntdsLVQWEIEVcklprlslngvrfkrisgtsigFKNIASKIANELKL
Flexible Loop (DISEMBL)
mepvpkhnvvsnavnddqvkprslrftwsmkttssrdpneIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCklprlslngvrfkrisgtsigfkniaskianelkl
Low Complexity Region (SEG)
MEPVPKHNVVSNAVNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL
Disordered region (IsUnstruct)
****************************************IMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIAS********
Disordered Region (DISOPRED)
***************************WSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL
Disordered Region (DISEMBL)
MEPVPKHNVVSNAVNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL
Disordered Region (DISPRO)
*******************KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEPVPKHNVVSNAVNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	119	2.2.26 [Sep-21-2011]
Q9P0L2	795	Serine/threonine-protein	yes	N/A	0.840	0.125	0.89	9e-49
O08678	793	Serine/threonine-protein	yes	N/A	0.857	0.128	0.862	3e-48
P27448	753	MAP/microtubule affinity-	no	N/A	0.857	0.135	0.852	5e-48
Q03141	753	MAP/microtubule affinity-	yes	N/A	0.941	0.148	0.796	5e-48
Q8VHJ5	795	Serine/threonine-protein	no	N/A	0.857	0.128	0.852	5e-48
Q8VHF0	797	MAP/microtubule affinity-	no	N/A	0.941	0.140	0.796	5e-48
A8WYE4	1088	Serine/threonine-protein	N/A	N/A	0.932	0.102	0.801	1e-47
Q9TW45	1192	Serine/threonine-protein	no	N/A	0.890	0.088	0.830	1e-47
Q05512	776	Serine/threonine-protein	no	N/A	0.949	0.145	0.711	5e-44
O08679	722	Serine/threonine-protein	no	N/A	0.857	0.141	0.784	1e-43

>sp|Q9P0L2|MARK1_HUMAN Serine/threonine-protein kinase MARK1 OS=Homo sapiens GN=MARK1 PE=1 SV=2

 Score =  191 bits (486), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 89/100 (89%), Positives = 93/100 (93%)

Query: 20  KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQW 79
           KPRSLRFTWSMKTTSS DPN++M EIRKVLDANNCDYEQ+ERFLL CVHGD   DSLVQW
Sbjct: 696 KPRSLRFTWSMKTTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQW 755

Query: 80  EIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           E+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 756 EMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 795

Serine/threonine-protein kinase involved in cell polarity and microtubule dynamics regulation. Phosphorylates DCX, MAP2, MAP4 and MAPT/TAU. Involved in cell polarity by phosphorylating the microtubule-associated proteins MAP2, MAP4 and MAPT/TAU at KXGS motifs, causing detachment from microtubules, and their disassembly. Involved in the regulation of neuronal migration through its dual activities in regulating cellular polarity and microtubule dynamics, possibly by phosphorylating and regulating DCX. Also acts as a positive regulator of the Wnt signaling pathway, probably by mediating phosphorylation of dishevelled proteins (DVL1, DVL2 and/or DVL3).
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 6

>sp|O08678|MARK1_RAT Serine/threonine-protein kinase MARK1 OS=Rattus norvegicus GN=Mark1 PE=1 SV=1

 Score =  189 bits (481), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 88/102 (86%), Positives = 93/102 (91%)

Query: 18  QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLV 77
           + KPRSLRFTWSMKTTSS DPN+++ EIRKVLDAN CDYEQRERFLL CVHGD   DSLV
Sbjct: 692 EAKPRSLRFTWSMKTTSSMDPNDMVREIRKVLDANTCDYEQRERFLLFCVHGDARQDSLV 751

Query: 78  QWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           QWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 752 QWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 793

Serine/threonine-protein kinase involved in cell polarity and microtubule dynamics regulation. Phosphorylates DCX, MAP2, MAP4 and MAPT/TAU. Involved in cell polarity by phosphorylating the microtubule-associated proteins MAP2, MAP4 and MAPT/TAU at KXGS motifs, causing detachment from microtubules, and their disassembly. Involved in the regulation of neuronal migration through its dual activities in regulating cellular polarity and microtubule dynamics, possibly by phosphorylating and regulating DCX. Also acts as a positive regulator of the Wnt signaling pathway, probably by mediating phosphorylation of dishevelled proteins (DVL1, DVL2 and/or DVL3).

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 6

>sp|P27448|MARK3_HUMAN MAP/microtubule affinity-regulating kinase 3 OS=Homo sapiens GN=MARK3 PE=1 SV=4

 Score =  189 bits (480), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 87/102 (85%), Positives = 94/102 (92%)

Query: 18  QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLV 77
           + KPRSLRFTWSMKTTSS DP ++M EIRKVLDANNCDYEQRERFLL CVHGD + ++LV
Sbjct: 652 EAKPRSLRFTWSMKTTSSMDPGDMMREIRKVLDANNCDYEQRERFLLFCVHGDGHAENLV 711

Query: 78  QWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           QWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 712 QWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 753

Involved in the specific phosphorylation of microtubule-associated proteins for tau, MAP2 and MAP4. Phosphorylates CDC25C on 'Ser-216'. Regulates localization and activity of some histone deacetylases by mediating phosphorylation of HDAC7, promoting subsequent interaction between HDAC7 and 14-3-3 and export from the nucleus.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q03141|MARK3_MOUSE MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus GN=Mark3 PE=1 SV=2

 Score =  189 bits (480), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 90/113 (79%), Positives = 101/113 (89%), Gaps = 1/113 (0%)

Query: 8   NVVSNAVNDD-QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLC 66
           NV S   +++ + KPRSLRFTWSMKTTSS DP+++M EIRKVLDANNCDYEQRERFLL C
Sbjct: 641 NVSSEQKDENREAKPRSLRFTWSMKTTSSMDPSDMMREIRKVLDANNCDYEQRERFLLFC 700

Query: 67  VHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           VHGD + ++LVQWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 701 VHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 753

Involved in the specific phosphorylation of microtubule-associated proteins for tau, MAP2 and MAP4. Phosphorylates CDC25C. Regulates localization and activity of some histone deacetylases by mediating phosphorylation of HDAC7, promoting subsequent interaction between HDAC7 and 14-3-3 and export from the nucleus.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8VHJ5|MARK1_MOUSE Serine/threonine-protein kinase MARK1 OS=Mus musculus GN=Mark1 PE=1 SV=2

 Score =  189 bits (480), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 87/102 (85%), Positives = 93/102 (91%)

Query: 18  QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLV 77
           + KPRSLRFTWSMKTTSS DPN+++ EIRKVLDAN CDYEQ+ERFLL CVHGD   DSLV
Sbjct: 694 EAKPRSLRFTWSMKTTSSMDPNDMLREIRKVLDANTCDYEQKERFLLFCVHGDARQDSLV 753

Query: 78  QWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           QWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 754 QWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 795

Serine/threonine-protein kinase involved in cell polarity and microtubule dynamics regulation. Phosphorylates DCX, MAP2, MAP4 and MAPT/TAU. Involved in cell polarity by phosphorylating the microtubule-associated proteins MAP2, MAP4 and MAPT/TAU at KXGS motifs, causing detachment from microtubules, and their disassembly. Involved in the regulation of neuronal migration through its dual activities in regulating cellular polarity and microtubule dynamics, possibly by phosphorylating and regulating DCX. Also acts as a positive regulator of the Wnt signaling pathway, probably by mediating phosphorylation of dishevelled proteins (DVL1, DVL2 and/or DVL3).

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q8VHF0|MARK3_RAT MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus GN=Mark3 PE=2 SV=1

 Score =  189 bits (479), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 90/113 (79%), Positives = 100/113 (88%), Gaps = 1/113 (0%)

Query: 8   NVVSNAVNDD-QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLC 66
           NV S   +++ + KPRSLRFTWSMKTTSS DP+++M EIRKVLDAN CDYEQRERFLL C
Sbjct: 685 NVSSEQKDENREAKPRSLRFTWSMKTTSSMDPSDMMREIRKVLDANTCDYEQRERFLLFC 744

Query: 67  VHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           VHGD + +SLVQWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 745 VHGDGHAESLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 797

Involved in the specific phosphorylation of microtubule-associated proteins for tau, MAP2 and MAP4. Phosphorylates CDC25C. Regulates localization and activity of some histone deacetylases by mediating phosphorylation of HDAC7, promoting subsequent interaction between HDAC7 and 14-3-3 and export from the nucleus.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A8WYE4|PAR1_CAEBR Serine/threonine-protein kinase par-1 OS=Caenorhabditis briggsae GN=par-1 PE=3 SV=1

 Score =  187 bits (476), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 89/111 (80%), Positives = 97/111 (87%)

Query: 9    VVSNAVNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVH 68
            V      +  VKPRSLRFTWSMKTTSS  P+++M EIRKVLDAN CDYEQRER+++LCVH
Sbjct: 978  VAQAMTQEGDVKPRSLRFTWSMKTTSSLAPDDMMREIRKVLDANGCDYEQRERYMILCVH 1037

Query: 69   GDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
            GDPNTDSLVQWE+EVCKLPRLSLNGVRFKRISGTSIGFKNIASKIA EL L
Sbjct: 1038 GDPNTDSLVQWEMEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIAQELNL 1088

Required for cytoplasmic partitioning and asymmetric cell division in early embryogenesis. Phosphorylates and restricts the asymmetry effector mex-5 (and possibly also mex-6) to the anterior cytoplasm of the zygote. Critical role in postembryonic vulval morphogenesis.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9TW45|PAR1_CAEEL Serine/threonine-protein kinase par-1 OS=Caenorhabditis elegans GN=par-1 PE=1 SV=1

 Score =  187 bits (476), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 88/106 (83%), Positives = 98/106 (92%)

Query: 14   VNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNT 73
            +++  VKPRSLRFTWSMKTTSS  P+++M EIRKVLDAN CDYEQRER+++LCVHGDPNT
Sbjct: 1087 IHEGDVKPRSLRFTWSMKTTSSLAPDDMMREIRKVLDANGCDYEQRERYMILCVHGDPNT 1146

Query: 74   DSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
            DSLVQWE+EVCKLPRLSLNGVRFKRISGTSIGFKNIASKIA EL L
Sbjct: 1147 DSLVQWEMEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIAQELNL 1192

Required for cytoplasmic partitioning and asymmetric cell division in early embryogenesis. Phosphorylates and restricts the asymmetry effector mex-5 (and possibly also mex-6) to the anterior cytoplasm of the zygote. Critical role in postembryonic vulval morphogenesis.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q05512|MARK2_MOUSE Serine/threonine-protein kinase MARK2 OS=Mus musculus GN=Mark2 PE=1 SV=3

 Score =  176 bits (445), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 84/118 (71%), Positives = 95/118 (80%), Gaps = 5/118 (4%)

Query: 7   HNVVSNAVNDD-----QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRER 61
           H V S   + D     + KPRSLRFTWSMKTTSS +PNE+M EIRKVLDAN+C  E  ER
Sbjct: 659 HVVGSGGTDKDKEEFREAKPRSLRFTWSMKTTSSMEPNEMMREIRKVLDANSCQSELHER 718

Query: 62  FLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           ++LLCVHG P  ++ VQWE+EVCKLPRLSLNGVRFKRISGTS+ FKNIASKIANELKL
Sbjct: 719 YMLLCVHGTPGHENFVQWEMEVCKLPRLSLNGVRFKRISGTSMAFKNIASKIANELKL 776

Serine/threonine-protein kinase involved in cell polarity and microtubule dynamics regulation. Phosphorylates CRTC2/TORC2, DCX, HDAC7, KIF13B, MAP2, MAP4, MAPT/TAU and RAB11FIP2. Plays a key role in cell polarity by phosphorylating the microtubule-associated proteins MAP2, MAP4 and MAPT/TAU at KXGS motifs, causing detachment from microtubules, and their disassembly. Regulates epithelial cell polarity by phosphorylating RAB11FIP2. Involved in the regulation of neuronal migration through its dual activities in regulating cellular polarity and microtubule dynamics, possibly by phosphorylating and regulating DCX. Regulates axogenesis by phosphorylating KIF13B, promoting interaction between KIF13B and 14-3-3 and inhibiting microtubule-dependent accumulation of KIF13B. Also required for neurite outgrowth and establishment of neuronal polarity. Regulates localization and activity of some histone deacetylases by mediating phosphorylation of HDAC7, promoting subsequent interaction between HDAC7 and 14-3-3 and export from the nucleus. Also acts as a positive regulator of the Wnt signaling pathway, probably by mediating phosphorylation of dishevelled proteins (DVL1, DVL2 and/or DVL3). Modulates the developmental decision to build a columnar versus a hepatic epithelial cell apparently by promoting a switch from a direct to a transcytotic mode of apical protein delivery. Essential for the asymmetric development of membrane domains of polarized epithelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 6

>sp|O08679|MARK2_RAT Serine/threonine-protein kinase MARK2 OS=Rattus norvegicus GN=Mark2 PE=1 SV=1

 Score =  174 bits (442), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/102 (78%), Positives = 90/102 (88%)

Query: 18  QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLV 77
           + KPRSLRFTWSMKTTSS +PNE+M EIRKVLDAN+C  E  ER++LLCVHG P  ++ V
Sbjct: 621 EAKPRSLRFTWSMKTTSSMEPNEMMREIRKVLDANSCQSELHERYMLLCVHGTPGHENFV 680

Query: 78  QWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           QWE+EVCKLPRLSLNGVRFKRISGTS+ FKNIASKIANELKL
Sbjct: 681 QWEMEVCKLPRLSLNGVRFKRISGTSMAFKNIASKIANELKL 722

Serine/threonine-protein kinase involved in cell polarity and microtubule dynamics regulation. Phosphorylates CRTC2/TORC2, DCX, HDAC7, KIF13B, MAP2, MAP4, MAPT/TAU and RAB11FIP2. Plays a key role in cell polarity by phosphorylating the microtubule-associated proteins MAP2, MAP4 and MAPT/TAU at KXGS motifs, causing detachment from microtubules, and their disassembly. Regulates epithelial cell polarity by phosphorylating RAB11FIP2. Involved in the regulation of neuronal migration through its dual activities in regulating cellular polarity and microtubule dynamics, possibly by phosphorylating and regulating DCX. Regulates axogenesis by phosphorylating KIF13B, promoting interaction between KIF13B and 14-3-3 and inhibiting microtubule-dependent accumulation of KIF13B. Also required for neurite outgrowth and establishment of neuronal polarity. Regulates localization and activity of some histone deacetylases by mediating phosphorylation of HDAC7, promoting subsequent interaction between HDAC7 and 14-3-3 and export from the nucleus. Also acts as a positive regulator of the Wnt signaling pathway, probably by mediating phosphorylation of dishevelled proteins (DVL1, DVL2 and/or DVL3). Modulates the developmental decision to build a columnar versus a hepatic epithelial cell apparently by promoting a switch from a direct to a transcytotic mode of apical protein delivery. Essential for the asymmetric development of membrane domains of polarized epithelial cells.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	119
328722304	1314	PREDICTED: MAP/microtubule affinity-regu	0.974	0.088	0.931	5e-60
328722306	941	PREDICTED: MAP/microtubule affinity-regu	0.974	0.123	0.931	6e-60
270004818	1121	par-1 [Tribolium castaneum]	0.924	0.098	0.954	3e-57
189235757	779	PREDICTED: similar to par-1 CG8201-PA [T	0.924	0.141	0.954	3e-57
321475182	833	hypothetical protein DAPPUDRAFT_313175 [	0.890	0.127	0.981	1e-56
350419319	1135	PREDICTED: serine/threonine-protein kina	1.0	0.104	0.868	5e-55
340708870	1141	PREDICTED: serine/threonine-protein kina	1.0	0.104	0.868	5e-55
383864976	1226	PREDICTED: serine/threonine-protein kina	1.0	0.097	0.868	8e-55
328791600	1127	PREDICTED: serine/threonine-protein kina	1.0	0.105	0.868	8e-55
241852080	841	map/microtubule affinity-regulating kina	0.974	0.137	0.863	1e-54

>gi|328722304|ref|XP_003247537.1| PREDICTED: MAP/microtubule affinity-regulating kinase 3-like isoform 1 [Acyrthosiphon pisum]

 Score =  234 bits (597), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 108/116 (93%), Positives = 115/116 (99%)

Query: 4    VPKHNVVSNAVNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFL 63
            +PK+N+VSN VNDDQ+KPRSLRFTWSMKTTS+RDPNEIMAEIR+VLDANNCDYEQRERFL
Sbjct: 1199 LPKNNIVSNTVNDDQMKPRSLRFTWSMKTTSTRDPNEIMAEIREVLDANNCDYEQRERFL 1258

Query: 64   LLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
            LLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIAN+LKL
Sbjct: 1259 LLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANDLKL 1314

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328722306|ref|XP_003247538.1| PREDICTED: MAP/microtubule affinity-regulating kinase 3-like isoform 2 [Acyrthosiphon pisum]

 Score =  234 bits (596), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 108/116 (93%), Positives = 115/116 (99%)

Query: 4   VPKHNVVSNAVNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFL 63
           +PK+N+VSN VNDDQ+KPRSLRFTWSMKTTS+RDPNEIMAEIR+VLDANNCDYEQRERFL
Sbjct: 826 LPKNNIVSNTVNDDQMKPRSLRFTWSMKTTSTRDPNEIMAEIREVLDANNCDYEQRERFL 885

Query: 64  LLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           LLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIAN+LKL
Sbjct: 886 LLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANDLKL 941

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270004818|gb|EFA01266.1| par-1 [Tribolium castaneum]

 Score =  225 bits (573), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 105/110 (95%), Positives = 106/110 (96%)

Query: 10   VSNAVNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHG 69
               A NDDQVKPRSLRFTWSMKTTSSRDP+EIMAEIRKVLDANNCDYEQRERFLLLCVHG
Sbjct: 1012 AGGAQNDDQVKPRSLRFTWSMKTTSSRDPSEIMAEIRKVLDANNCDYEQRERFLLLCVHG 1071

Query: 70   DPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
            DPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL
Sbjct: 1072 DPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 1121

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189235757|ref|XP_968516.2| PREDICTED: similar to par-1 CG8201-PA [Tribolium castaneum]

 Score =  225 bits (573), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 105/110 (95%), Positives = 106/110 (96%)

Query: 10  VSNAVNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHG 69
              A NDDQVKPRSLRFTWSMKTTSSRDP+EIMAEIRKVLDANNCDYEQRERFLLLCVHG
Sbjct: 670 AGGAQNDDQVKPRSLRFTWSMKTTSSRDPSEIMAEIRKVLDANNCDYEQRERFLLLCVHG 729

Query: 70  DPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           DPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL
Sbjct: 730 DPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 779

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321475182|gb|EFX86145.1| hypothetical protein DAPPUDRAFT_313175 [Daphnia pulex]

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 104/106 (98%), Positives = 105/106 (99%)

Query: 14  VNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNT 73
           VNDDQVKPRSLRFTWSMKTTSSRDPNEIM EIRKVLDANNCDYEQRER+LLLCVHGDPNT
Sbjct: 728 VNDDQVKPRSLRFTWSMKTTSSRDPNEIMMEIRKVLDANNCDYEQRERYLLLCVHGDPNT 787

Query: 74  DSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           DSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL
Sbjct: 788 DSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 833

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350419319|ref|XP_003492142.1| PREDICTED: serine/threonine-protein kinase MARK2-like [Bombus impatiens]

 Score =  218 bits (554), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 106/122 (86%), Positives = 109/122 (89%), Gaps = 3/122 (2%)

Query: 1    MEPV--PKHNVVSNAV-NDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYE 57
            M+P   PKH VVS A  ND+QVKPRSLRFTWSMKTTSSRDPNEIM+EIRKVLDAN C YE
Sbjct: 1014 MDPSVPPKHPVVSGATTNDEQVKPRSLRFTWSMKTTSSRDPNEIMSEIRKVLDANKCQYE 1073

Query: 58   QRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL 117
            QRERFLLLC HGD  TDS VQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL
Sbjct: 1074 QRERFLLLCAHGDAATDSQVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL 1133

Query: 118  KL 119
            KL
Sbjct: 1134 KL 1135

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340708870|ref|XP_003393041.1| PREDICTED: serine/threonine-protein kinase MARK2-like [Bombus terrestris]

 Score =  217 bits (553), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 106/122 (86%), Positives = 109/122 (89%), Gaps = 3/122 (2%)

Query: 1    MEPV--PKHNVVSNAV-NDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYE 57
            M+P   PKH VVS A  ND+QVKPRSLRFTWSMKTTSSRDPNEIM+EIRKVLDAN C YE
Sbjct: 1020 MDPSVPPKHPVVSGATTNDEQVKPRSLRFTWSMKTTSSRDPNEIMSEIRKVLDANKCQYE 1079

Query: 58   QRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL 117
            QRERFLLLC HGD  TDS VQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL
Sbjct: 1080 QRERFLLLCAHGDAATDSQVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL 1139

Query: 118  KL 119
            KL
Sbjct: 1140 KL 1141

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864976|ref|XP_003707953.1| PREDICTED: serine/threonine-protein kinase MARK2-like [Megachile rotundata]

 Score =  217 bits (552), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 106/122 (86%), Positives = 109/122 (89%), Gaps = 3/122 (2%)

Query: 1    MEPV--PKHNVVSNAV-NDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYE 57
            M+P   PKH VVS A  ND+QVKPRSLRFTWSMKTTSSRDPNEIM+EIRKVLDAN C YE
Sbjct: 1105 MDPSVPPKHPVVSGATTNDEQVKPRSLRFTWSMKTTSSRDPNEIMSEIRKVLDANKCQYE 1164

Query: 58   QRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL 117
            QRERFLLLC HGD  TDS VQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL
Sbjct: 1165 QRERFLLLCAHGDAATDSQVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL 1224

Query: 118  KL 119
            KL
Sbjct: 1225 KL 1226

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328791600|ref|XP_394194.4| PREDICTED: serine/threonine-protein kinase MARK2 isoform 1 [Apis mellifera]

 Score =  217 bits (552), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 106/122 (86%), Positives = 109/122 (89%), Gaps = 3/122 (2%)

Query: 1    MEPV--PKHNVVSNAV-NDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYE 57
            M+P   PKH VVS A  ND+QVKPRSLRFTWSMKTTSSRDPNEIM+EIRKVLDAN C YE
Sbjct: 1006 MDPSVPPKHPVVSGATTNDEQVKPRSLRFTWSMKTTSSRDPNEIMSEIRKVLDANKCQYE 1065

Query: 58   QRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL 117
            QRERFLLLC HGD  TDS VQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL
Sbjct: 1066 QRERFLLLCAHGDAATDSQVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL 1125

Query: 118  KL 119
            KL
Sbjct: 1126 KL 1127

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241852080|ref|XP_002415812.1| map/microtubule affinity-regulating kinase 2,4, putative [Ixodes scapularis] gi|215510026|gb|EEC19479.1| map/microtubule affinity-regulating kinase 2,4, putative [Ixodes scapularis]

 Score =  216 bits (551), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 101/117 (86%), Positives = 110/117 (94%), Gaps = 1/117 (0%)

Query: 3   PVPKHNVVSNAVNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERF 62
           P+P+  + +  +N++QVKPRSLRFTWSMKTTSSRDPNEIM EIRKVLD NNCDYEQRE+F
Sbjct: 726 PMPRE-LRTRGLNEEQVKPRSLRFTWSMKTTSSRDPNEIMQEIRKVLDRNNCDYEQREKF 784

Query: 63  LLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           LLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASK+ANELKL
Sbjct: 785 LLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKVANELKL 841

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	119
UNIPROTKB|J9P3Y6	685	MARK1 "Uncharacterized protein	0.840	0.145	0.89	2.8e-44
UNIPROTKB|E1BRA3	729	MARK3 "Uncharacterized protein	0.941	0.153	0.796	5.3e-44
UNIPROTKB|I3LBZ2	774	MARK1 "Uncharacterized protein	0.840	0.129	0.89	7.9e-44
UNIPROTKB|A2SY06	331	MARK3 "MAP/microtubule affinit	0.941	0.338	0.787	8.1e-44
UNIPROTKB|H0YIY6	505	MARK3 "MAP/microtubule affinit	0.941	0.221	0.787	8.1e-44
UNIPROTKB|G5E5D4	786	MARK1 "Uncharacterized protein	0.840	0.127	0.89	8.5e-44
UNIPROTKB|F1Q1P8	795	MARK1 "Uncharacterized protein	0.840	0.125	0.89	9e-44
UNIPROTKB|Q9P0L2	795	MARK1 "Serine/threonine-protei	0.840	0.125	0.89	9e-44
UNIPROTKB|E1BVK0	799	MARK1 "Uncharacterized protein	0.840	0.125	0.89	9.3e-44
MGI|MGI:1341865	753	Mark3 "MAP/microtubule affinit	0.941	0.148	0.796	1.1e-43

UNIPROTKB|J9P3Y6 MARK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 468 (169.8 bits), Expect = 2.8e-44, P = 2.8e-44
 Identities = 89/100 (89%), Positives = 93/100 (93%)

Query:    20 KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQW 79
             KPRSLRFTWSMKTTSS DPN++M EIRKVLDANNCDYEQ+ERFLL CVHGD   DSLVQW
Sbjct:   586 KPRSLRFTWSMKTTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQW 645

Query:    80 EIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
             E+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct:   646 EMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 685

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|E1BRA3 MARK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 468 (169.8 bits), Expect = 5.3e-44, P = 5.3e-44
 Identities = 90/113 (79%), Positives = 101/113 (89%)

Query:     8 NVVSNAVNDD-QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLC 66
             NV  +  +++ + KPRSLRFTWSMKTTSS DPN++M EIRKVLDANNCDYEQRERFLL C
Sbjct:   617 NVAVDQKDENKEAKPRSLRFTWSMKTTSSMDPNDMMREIRKVLDANNCDYEQRERFLLFC 676

Query:    67 VHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
             VHGD + ++LVQWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct:   677 VHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 729

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|I3LBZ2 MARK1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 468 (169.8 bits), Expect = 7.9e-44, P = 7.9e-44
 Identities = 89/100 (89%), Positives = 93/100 (93%)

Query:    20 KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQW 79
             KPRSLRFTWSMKTTSS DPN++M EIRKVLDANNCDYEQ+ERFLL CVHGD   DSLVQW
Sbjct:   675 KPRSLRFTWSMKTTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQW 734

Query:    80 EIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
             E+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct:   735 EMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 774

GO:0070300 "phosphatidic acid binding" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0001786 "phosphatidylserine binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

UNIPROTKB|A2SY06 MARK3 "MAP/microtubule affinity-regulating kinase 3" [Homo sapiens (taxid:9606)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 89/113 (78%), Positives = 100/113 (88%)

Query:     8 NVVSNAVNDD-QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLC 66
             NV +   +++ + KPRSLRFTWSMKTTSS DP ++M EIRKVLDANNCDYEQRERFLL C
Sbjct:   219 NVSAEQKDENKEAKPRSLRFTWSMKTTSSMDPGDMMREIRKVLDANNCDYEQRERFLLFC 278

Query:    67 VHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
             VHGD + ++LVQWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct:   279 VHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 331

GO:0016301 "kinase activity" evidence=IEA

UNIPROTKB|H0YIY6 MARK3 "MAP/microtubule affinity-regulating kinase 3" [Homo sapiens (taxid:9606)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 89/113 (78%), Positives = 100/113 (88%)

Query:     8 NVVSNAVNDD-QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLC 66
             NV +   +++ + KPRSLRFTWSMKTTSS DP ++M EIRKVLDANNCDYEQRERFLL C
Sbjct:   393 NVSAEQKDENKEAKPRSLRFTWSMKTTSSMDPGDMMREIRKVLDANNCDYEQRERFLLFC 452

Query:    67 VHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
             VHGD + ++LVQWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct:   453 VHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 505

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|G5E5D4 MARK1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 468 (169.8 bits), Expect = 8.5e-44, P = 8.5e-44
 Identities = 89/100 (89%), Positives = 93/100 (93%)

Query:    20 KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQW 79
             KPRSLRFTWSMKTTSS DPN++M EIRKVLDANNCDYEQ+ERFLL CVHGD   DSLVQW
Sbjct:   687 KPRSLRFTWSMKTTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQW 746

Query:    80 EIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
             E+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct:   747 EMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 786

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1Q1P8 MARK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 468 (169.8 bits), Expect = 9.0e-44, P = 9.0e-44
 Identities = 89/100 (89%), Positives = 93/100 (93%)

Query:    20 KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQW 79
             KPRSLRFTWSMKTTSS DPN++M EIRKVLDANNCDYEQ+ERFLL CVHGD   DSLVQW
Sbjct:   696 KPRSLRFTWSMKTTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQW 755

Query:    80 EIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
             E+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct:   756 EMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 795

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q9P0L2 MARK1 "Serine/threonine-protein kinase MARK1" [Homo sapiens (taxid:9606)]

 Score = 468 (169.8 bits), Expect = 9.0e-44, P = 9.0e-44
 Identities = 89/100 (89%), Positives = 93/100 (93%)

Query:    20 KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQW 79
             KPRSLRFTWSMKTTSS DPN++M EIRKVLDANNCDYEQ+ERFLL CVHGD   DSLVQW
Sbjct:   696 KPRSLRFTWSMKTTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQW 755

Query:    80 EIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
             E+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct:   756 EMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 795

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0000226 "microtubule cytoskeleton organization" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISS

GO:0005856 "cytoskeleton" evidence=ISS

GO:0007010 "cytoskeleton organization" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding" evidence=IDA

GO:0070300 "phosphatidic acid binding" evidence=IDA

GO:0001786 "phosphatidylserine binding" evidence=IDA

GO:0050321 "tau-protein kinase activity" evidence=ISS

GO:0001764 "neuron migration" evidence=ISS

GO:0015630 "microtubule cytoskeleton" evidence=TAS

UNIPROTKB|E1BVK0 MARK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 468 (169.8 bits), Expect = 9.3e-44, P = 9.3e-44
 Identities = 89/100 (89%), Positives = 93/100 (93%)

Query:    20 KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQW 79
             KPRSLRFTWSMKTTSS DPN++M EIRKVLDANNCDYEQ+ERFLL CVHGD   DSLVQW
Sbjct:   700 KPRSLRFTWSMKTTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQW 759

Query:    80 EIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
             E+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct:   760 EMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 799

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0001786 "phosphatidylserine binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0070300 "phosphatidic acid binding" evidence=IEA

MGI|MGI:1341865 Mark3 "MAP/microtubule affinity-regulating kinase 3" [Mus musculus (taxid:10090)]

 Score = 466 (169.1 bits), Expect = 1.1e-43, P = 1.1e-43
 Identities = 90/113 (79%), Positives = 101/113 (89%)

Query:     8 NVVSNAVNDD-QVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLC 66
             NV S   +++ + KPRSLRFTWSMKTTSS DP+++M EIRKVLDANNCDYEQRERFLL C
Sbjct:   641 NVSSEQKDENREAKPRSLRFTWSMKTTSSMDPSDMMREIRKVLDANNCDYEQRERFLLFC 700

Query:    67 VHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
             VHGD + ++LVQWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct:   701 VHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 753

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O08678	MARK1_RAT	2, ., 7, ., 1, 1, ., 2, 6	0.8627	0.8571	0.1286	yes	N/A
Q03141	MARK3_MOUSE	2, ., 7, ., 1, 1, ., 1	0.7964	0.9411	0.1487	yes	N/A
Q9P0L2	MARK1_HUMAN	2, ., 7, ., 1, 1, ., 2, 6	0.89	0.8403	0.1257	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	119
cd12196	98	cd12196, MARK1-3_C, C-terminal, kinase associated	1e-74
cd12201	99	cd12201, MARK2_C, C-terminal, kinase associated do	2e-59
cd12121	96	cd12121, MARK_C_like, C-terminal kinase associated	3e-46
cd12197	99	cd12197, MARK4_C, C-terminal, kinase associated do	3e-33
cd12120	95	cd12120, AMPKA_C_like, C-terminal regulatory domai	4e-31
pfam02149	46	pfam02149, KA1, Kinase associated domain 1	1e-17
cd12198	96	cd12198, MELK_C, C-terminal kinase associated doma	6e-12

>gnl|CDD|213381 cd12196, MARK1-3_C, C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinases 1-3

 Score =  216 bits (551), Expect = 1e-74
 Identities = 89/98 (90%), Positives = 92/98 (93%)

Query: 20  KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQW 79
           KPRSLRFTWSMKTTSS DPN++M EIRKVLDANNCDYEQRERFLL CVHGD  TDSLVQW
Sbjct: 1   KPRSLRFTWSMKTTSSMDPNDMMREIRKVLDANNCDYEQRERFLLFCVHGDGRTDSLVQW 60

Query: 80  EIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL 117
           E+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANEL
Sbjct: 61  EMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANEL 98

Microtubule-associated protein/microtubule affinity regulating kinases (MARKs), also called partition-defective (Par-1) kinases, are serine/threonine protein kinases (STKs) that catalyze the transfer of the gamma-phosphoryl group from ATP to S/T residues on protein substrates. They phosphorylate the tau protein and related microtubule-associated proteins (MAPs) on tubulin binding sites to induce detachment from microtubules, and are involved in the regulation of cell shape and polarity, cell cycle control, transport, and the cytoskeleton. Mammals contain four proteins, MARK1-4, encoded by distinct genes belonging to this subfamily, with additional isoforms arising from alternative splicing. MARK1/2, through their activation by death-associated protein kinase (DAPK), modulates polarized neurite outgrowth. MARK1, also called Par-1c, is also involved in axon-dendrite specification, and SNPs on the MARK1 gene is associated with autism spectrum disorders. MARK2, also called Par-1b, is implicated in many physiological processes including fertility, immune system homeostasis, learning and memory, growth, and metabolism. MARK3, also called Par-1a, is implicated in gluconeogenesis and adiposity; mice deficient with MARK3 display reduced adiposity, resistance to hepatic steatosis, and defective gluconeogensis. MARKs contain an N-terminal catalytic kinase domain, a ubiquitin-associated domain (UBA), and a C-terminal kinase associated domain (KA1). The KA1 domain binds anionic phospholipids and may be involved in membrane localization as well as in auto-inhibition of the kinase domain. Length = 98

>gnl|CDD|213386 cd12201, MARK2_C, C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinase 2

 Score =  177 bits (450), Expect = 2e-59
 Identities = 81/99 (81%), Positives = 89/99 (89%)

Query: 20  KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQW 79
           KPRSLRFTWSMKTTSS +PNE+M EIRKVLDANNC YE +E+++LLC+HG P  D  VQW
Sbjct: 1   KPRSLRFTWSMKTTSSMEPNEMMKEIRKVLDANNCQYELQEKYMLLCMHGTPGHDDFVQW 60

Query: 80  EIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELK 118
           E+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELK
Sbjct: 61  EMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELK 99

Microtubule-associated protein/microtubule affinity regulating kinases (MARKs), also called partition-defective (Par-1) kinases, are serine/threonine protein kinases (STKs) that catalyze the transfer of the gamma-phosphoryl group from ATP to S/T residues on protein substrates. They phosphorylate the tau protein and related microtubule-associated proteins (MAPs) on tubulin binding sites to induce detachment from microtubules, and are involved in the regulation of cell shape and polarity, cell cycle control, transport, and the cytoskeleton. Mammals contain four proteins, MARK1-4, encoded by distinct genes belonging to this subfamily, with additional isoforms arising from alternative splicing. MARK2, also called Par-1b or ELKL motif kinase 1 (EMK-1), is implicated in many physiological processes including fertility, immune system homeostasis, learning and memory, growth, and metabolism. It also regulates axon formation and has been implicated in neurodegeneration. MARKs contain an N-terminal catalytic kinase domain, a ubiquitin-associated domain (UBA), and a C-terminal kinase associated domain (KA1). The KA1 domain binds anionic phospholipids and may be involved in membrane localization as well as in auto-inhibition of the kinase domain. Length = 99

>gnl|CDD|213377 cd12121, MARK_C_like, C-terminal kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinases, and similar domains

 Score =  144 bits (365), Expect = 3e-46
 Identities = 53/96 (55%), Positives = 68/96 (70%)

Query: 22  RSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEI 81
           RSLR  +S+ TTS++ P EIM EI++VL +N  DYE+   +LL C HGD +    V +EI
Sbjct: 1   RSLRGPFSVATTSTKSPEEIMNEIKRVLRSNGIDYEEVGGYLLECKHGDSSGGEFVIFEI 60

Query: 82  EVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL 117
           E+CKLPRL LNG+RFKRISG S  +K +  KI NEL
Sbjct: 61  EICKLPRLGLNGIRFKRISGDSWQYKRLCKKILNEL 96

Microtubule-associated protein/microtubule affinity regulating kinases (MARKs), also called partition-defective (Par-1) kinases, are serine/threonine protein kinases (STKs) that catalyze the transfer of the gamma-phosphoryl group from ATP to S/T residues on protein substrates. They phosphorylate the tau protein and related microtubule-associated proteins (MAPs) on tubulin binding sites to induce detachment from microtubules, and are involved in the regulation of cell shape and polarity, cell cycle control, transport, and the cytoskeleton. Mammals contain four proteins, MARK1-4, encoded by distinct genes belonging to this subfamily, with additional isoforms arising from alternative splicing. In yeast, MARK/Par-1 homologs are called Kin1/2 kinases. Kin1 is a membrane-associated kinase that is involved in regulating cytokinesis and the cell surface. MARKs contain an N-terminal catalytic kinase domain, a ubiquitin-associated domain (UBA), and a C-terminal kinase associated domain (KA1). The KA1 domain binds anionic phospholipids and may be involved in membrane localization as well as in auto-inhibition of the kinase domain. Length = 96

>gnl|CDD|213382 cd12197, MARK4_C, C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinase 4

 Score =  111 bits (278), Expect = 3e-33
 Identities = 46/99 (46%), Positives = 61/99 (61%), Gaps = 1/99 (1%)

Query: 22  RSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDS-LVQWE 80
           R LR  W ++  SSR P E++  +R+      C   Q   FLL C+HG   +   LV +E
Sbjct: 1   RLLRGGWDVRLRSSRPPAEVVLALREATAGCGCRVRQAGPFLLACLHGAAGSPEPLVAFE 60

Query: 81  IEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
            EVC+LPR  LNGVRFKR+ GT + F+ IASKI+ EL+L
Sbjct: 61  AEVCQLPRGELNGVRFKRLWGTPLAFRTIASKISKELEL 99

Microtubule-associated protein/microtubule affinity regulating kinases (MARKs), also called partition-defective (Par-1) kinases, are serine/threonine protein kinases (STKs) that catalyze the transfer of the gamma-phosphoryl group from ATP to S/T residues on protein substrates. They phosphorylate the tau protein and related microtubule-associated proteins (MAPs) on tubulin binding sites to induce detachment from microtubules, and are involved in the regulation of cell shape and polarity, cell cycle control, transport, and the cytoskeleton. Mammals contain four proteins, MARK1-4, encoded by distinct genes belonging to this subfamily, with additional isoforms arising from alternative splicing. MARK4 has two splicing isoforms: MARK4S, predominantly expressed in the brain; and MARK4L, expressed in all tissues. Unlike MARK1-3 that show cytoplasmic localization, MARK4 colocalizes with the centrosome and with microtubules. Decreased MARK4 expression in the brain may be involved in the pathogenesis of Prion diseases and may be correlated to PrP(Sc) deposits. MARK4 is also a component of the ectoplasmic specialization, a testis-specific adherens junction. MARKs contain an N-terminal catalytic kinase domain, a ubiquitin-associated domain (UBA), and a C-terminal kinase associated domain (KA1). The KA1 domain binds anionic phospholipids and may be involved in membrane localization as well as in auto-inhibition of the kinase domain. Length = 99

>gnl|CDD|213376 cd12120, AMPKA_C_like, C-terminal regulatory domain of 5'-AMP-activated protein kinase (AMPK) alpha subunit and similar domains

 Score =  105 bits (264), Expect = 4e-31
 Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 25  RFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRER-FLLLCVHGDPN--TDSLVQWEI 81
           R  W ++  S  DP+EI   I KVL+    +   R   F++     + +        +EI
Sbjct: 1   RKKWELEIHSRIDPSEIYEGIHKVLEGWGKNLVFRITNFIITGKLVNDHILFLRSTLFEI 60

Query: 82  EVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANEL 117
           EV ++    L  V FK+ +G++  F  +A+KI  +L
Sbjct: 61  EVYEVGP-GLFMVDFKKKTGSTKTFTKLATKIQIKL 95

This family is composed of AMPKs, microtubule-associated protein/microtubule affinity regulating kinases (MARKs), yeast Kcc4p-like proteins, plant calcineurin B-Like (CBL)-interacting protein kinases (CIPKs), and similar proteins. They are serine/threonine protein kinases (STKs) that catalyze the transfer of the gamma-phosphoryl group from ATP to S/T residues on protein substrates. AMPKs act as sensors for the energy status of the cell and are activated by cellular stresses that lead to ATP depletion such as hypoxia, heat shock, and glucose deprivation, among others. MARKs phosphorylate the tau protein and related microtubule-associated proteins (MAPs) on tubulin binding sites to induce detachment from microtubules, and are involved in the regulation of cell shape and polarity, cell cycle control, transport, and the cytoskeleton. Kcc4p and related proteins are septin-associated proteins that are involved in septin organization and in the yeast morphogenesis checkpoint coordinating the cell cycle with bud formation. CIPKs interact with the calcineurin B-like (CBL) calcium sensors to form a signaling network that decode specific calcium signals triggered by a variety of environmental stimuli including salinity, drought, cold, light, and mechanical perturbation, among others. All members of this family contain an N-terminal catalytic kinase domain and a C-terminal regulatory domain which is also called kinase associated domain 1 (KA1) in some cases. The C-terminal regulatory domain serves as a protein interaction domain in AMPKs and CIPKs. In MARKs and Kcc4p-like proteins, this domain binds phospholipids and may be involved in membrane localization. Length = 95

>gnl|CDD|190228 pfam02149, KA1, Kinase associated domain 1

 Score = 70.3 bits (173), Expect = 1e-17
 Identities = 27/46 (58%), Positives = 37/46 (80%)

Query: 74  DSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
            S+V++EIEVCKLPRL L GV FKR+SG    +K++A+KI +EL+L
Sbjct: 1   PSVVKFEIEVCKLPRLGLYGVDFKRLSGPQWQYKDLAAKILSELRL 46

Length = 46

>gnl|CDD|213383 cd12198, MELK_C, C-terminal kinase associated domain 1 (KA1) of Maternal embryonic leucine zipper kinase

 Score = 56.9 bits (138), Expect = 6e-12
 Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 29  SMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPR 88
           ++ TTSS+DP +++ E+++VL     D +Q+  + L C   D      + +E+EVC+LP 
Sbjct: 8   NVSTTSSKDPEQVLNELKRVLAKKGIDCKQK-GYTLRCKTKDDFGKVKLTFELEVCRLPG 66

Query: 89  LS-LNGVRFKRISGTSIGFKNIASKI 113
           L  + G+R KR+ G +  +K +   I
Sbjct: 67  LDEVVGIRRKRLKGDAWVYKKVCEDI 92

MELK, also called protein kinase 38 (PK38) or pEg3 kinase, is a cell cycle-regulated serine/threonine protein kinase (STK) that catalyzes the transfer of the gamma-phosphoryl group from ATP to S/T residues on protein substrates. It is phosphorylated and maximally active during mitosis and is involved in regulating cell cycle progression, division, proliferation, tumor growth, and mRNA splicing. MELK shows a broad substrate specificity, including the zinc finger-like protein ZPR9, the transcription and splicing factor NIPP1, and the protein-tyrosine phosphatase Cdc25B, among others. MELK contains an N-terminal catalytic domain followed by a ubiquitin-associated (UBA) domain, a TP dipeptide-rich region, and a C-terminal KA1 domain. The KA1 domain of MELK, together with its TP dipeptide-rich region, functions as an autoinhibitory domain. The KA1 domain of the related microtubule affinity-regulating kinases (MARKs) has been shown to bind anionic phospholipids and may be involved in membrane localization. Length = 96

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	119
PF02149	47	KA1: Kinase associated domain 1; InterPro: IPR0017	99.87
KOG0586|consensus	596		97.7

>PF02149 KA1: Kinase associated domain 1; InterPro: IPR001772 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.87  E-value=3.6e-22  Score=119.40  Aligned_cols=46  Identities=63%  Similarity=1.017  Sum_probs=41.4

Q ss_pred             CcceEEEEEEEeecCCCcceeeEEEecCCchhHHHHHHHHHHhcCC
Q psy2644          74 DSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL  119 (119)
Q Consensus        74 ~~~v~fEiEVcrl~~l~l~gi~fkRl~Gd~~~Yk~lc~~il~~l~L  119 (119)
                      +..|+||||||++|++++|||+|||++||+|+||++|++|+++|+|
T Consensus         2 ~~~v~fEieV~kl~~~~l~Gv~~kRi~Gd~~~yk~lc~~il~~l~L   47 (47)
T PF02149_consen    2 KEVVKFEIEVCKLPRLGLYGVDFKRISGDSWQYKDLCSKILNELRL   47 (47)
T ss_dssp             CC-EEEEEEEEEECCCTCEEEEEEEEES-HHHHHHHHHHHHHHTT-
T ss_pred             CcceEEEEEEEEecCCCeeEEEEEEeeCCHHHHHHHHHHHHHHccC
Confidence            3579999999999999999999999999999999999999999987

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. Members of the KIN2/PAR-1/MARK kinase subfamily are conserved from yeast to human and share the same domain organisation: an N-terminal kinase domain (IPR000719 from INTERPRO) and a C-terminal kinase associated domain 1 (KA1). Some members of the KIN1/PAR-1/MARK family also contain an UBA domain (IPR000449 from INTERPRO). Members of this kinase subfamily are involved in various biological processes such as cell polarity, cell cycle control, intracellular signalling, microtubule stability and protein stability []. The function of the KA1 domain is not yet known. Some proteins known to contain a KA1 domain are listed below: Mammalian MAP/microtubule affinity-regulating kinases (MARK 1,2,3). They regulate polarity in neuronal cell models and appear to function redundantly in phosphorylating MT-associated proteins and in regulating MT stability []. Mammalian maternal embryonic leucine zipper kinase (MELK). It phosphorylates ZNF622 and may contribute to its redirection to the nucleus. It may be involved in the inhibition of spliceosome assembly during mitosis. Caenorhabditis elegans and drosophila PAR-1 protein. It is required for establishing polarity in embryos where it is asymmetrically distributed []. Fungal Kin1 and Kin2 protein kinases involved in regulation of exocytosis. They localise to the cytoplasmic face of the plasma membrane []. Plant KIN10 and KIN11 proteins, catalytic subunits of the putative trimeric SNF1-related protein kinase (SnRK) complex. This entry represents the KA1 domain.; GO: 0004674 protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3OSE_A 1V5S_A 1UL7_A.

>KOG0586|consensus

Probab=97.70  E-value=8.2e-06  Score=70.14  Aligned_cols=60  Identities=82%  Similarity=1.327  Sum_probs=52.7

Q ss_pred             HHHHHHHHhhCCCceEEeCcEEEEeeeCCCCCCcceEEEEEEEeecCCCcceeeEEEecCCchhHHHHHHH
Q psy2644          42 MAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASK  112 (119)
Q Consensus        42 m~ei~rvL~~~~i~~~~~g~y~l~C~~~~~~~~~~v~fEiEVcrl~~l~l~gi~fkRl~Gd~~~Yk~lc~~  112 (119)
                      |.|++.+++.+++++++.+      .+.|+.....++|++++|++|.++.+|+||+|++     ++.++++
T Consensus       536 ~~~~~~v~~~~~~~~~~~~------~~~~~~a~a~~~~~~~~~~~~~~s~~g~r~~r~s-----~~~~~s~  595 (596)
T KOG0586|consen  536 MREIRKVLDANGCDYEQLR------YHGDPGADAMVQWEMEVCKLPRLSLNGVRFRRIS-----FKNIASK  595 (596)
T ss_pred             hhhhhhccccccccccccc------cCCCCCcccccccccceeecCcccccceeecccc-----CCCccCC
Confidence            9999999999999999776      4667667788999999999999999999999998     7776654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	119
3ose_A	120	Structure Of The Kinase Associated Domain 1 (Ka1) F		4e-49
1ul7_A	102	Solution Structure Of Kinase Associated Domain 1 Of		1e-44
1v5s_A	126	Solution Structure Of Kinase Associated Domain 1 Of		2e-37

>pdb|3OSE|A Chain A, Structure Of The Kinase Associated Domain 1 (Ka1) From Mark1 Kinase Length = 120

Iteration: 1
 Score =  189 bits (479), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 89/100 (89%), Positives = 93/100 (93%)
Query: 20  KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQW 79
           KPRSLRFTWSMKTTSS DPN++M EIRKVLDANNCDYEQ+ERFLL CVHGD   DSLVQW
Sbjct: 21  KPRSLRFTWSMKTTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQW 80
Query: 80  EIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           E+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 81  EMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 120

>pdb|1UL7|A Chain A, Solution Structure Of Kinase Associated Domain 1 Of Mouse MapMICROTUBULE AFFINITY-Regulating Kinase 3 Length = 102

Iteration: 1
 Score =  174 bits (441), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 82/97 (84%), Positives = 89/97 (91%)
Query: 23  SLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIE 82
           S RFTWSMKTTSS DP+++M EIRKVL ANNCDYEQRERFLL CVHGD + ++LVQWE+E
Sbjct: 6   SGRFTWSMKTTSSMDPSDMMREIRKVLGANNCDYEQRERFLLFCVHGDGHAENLVQWEME 65
Query: 83  VCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           VCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 66  VCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 102

>pdb|1V5S|A Chain A, Solution Structure Of Kinase Associated Domain 1 Of Mouse MapMICROTUBULE AFFINITY-Regulating Kinase 3 Length = 126

Iteration: 1
 Score =  150 bits (379), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 75/109 (68%), Positives = 85/109 (77%), Gaps = 3/109 (2%)
Query: 11  SNAVNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGD 70
           ++A N D   P +    +   + SS D   +M EIRKVL ANNCDYEQRERFLL CVHGD
Sbjct: 15  AHAHNKDYDIPTTENLYFQGSSGSSGD---MMREIRKVLGANNCDYEQRERFLLFCVHGD 71
Query: 71  PNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
            + ++LVQWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 72  GHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 120

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	119
3ose_A	120	Serine/threonine-protein kinase MARK1; kinase asso	2e-48
1v5s_A	126	MAP/microtubule affinity-regulating kinase 3; Ka1	6e-45
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-06

>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} PDB: 1ul7_A Length = 120

 Score =  149 bits (378), Expect = 2e-48
 Identities = 89/105 (84%), Positives = 93/105 (88%)

Query: 15  NDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTD 74
                KPRSLRFTWSMKTTSS DPN++M EIRKVLDANNCDYEQ+ERFLL CVHGD   D
Sbjct: 16  EGKDSKPRSLRFTWSMKTTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQD 75

Query: 75  SLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           SLVQWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 76  SLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 120

>1v5s_A MAP/microtubule affinity-regulating kinase 3; Ka1 domain, ELKL motif, MARK3, phosphorylation, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.129.6.1 Length = 126

 Score =  141 bits (356), Expect = 6e-45
 Identities = 73/105 (69%), Positives = 81/105 (77%), Gaps = 3/105 (2%)

Query: 15  NDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTD 74
           N D   P +    +     SS    ++M EIRKVL ANNCDYEQRERFLL CVHGD + +
Sbjct: 19  NKDYDIPTTENLYFQG---SSGSSGDMMREIRKVLGANNCDYEQRERFLLFCVHGDGHAE 75

Query: 75  SLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           +LVQWE+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 76  NLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 120

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 43.2 bits (102), Expect = 3e-06
 Identities = 18/101 (17%), Positives = 45/101 (44%), Gaps = 4/101 (3%)

Query: 3   PVPKHNVVSNAVNDDQVKPRSL-RFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRER 61
             P+     + +N  + K + + +  W +   S   PN+IMAE+ + +   + +++    
Sbjct: 372 ETPRARHTLDELNPQKSKHQGVRKAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNP 431

Query: 62  FLLLCVHGDPNTDSLVQWEIEVCKL-PRLSLNGVRFKRISG 101
           + L     +P T +  +  +++ ++  R  L  + F+ I  
Sbjct: 432 YYLRVRRKNPVTSTFSKMSLQLYQVDSRTYL--LDFRSIDD 470

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	119
3ose_A	120	Serine/threonine-protein kinase MARK1; kinase asso	100.0
1v5s_A	126	MAP/microtubule affinity-regulating kinase 3; Ka1	100.0
4eai_A	106	5'-AMP-activated protein kinase catalytic subunit	99.87
2v8q_A	157	5'-AMP-activated protein kinase catalytic subunit;	99.79
2y8l_A	173	5'-AMP-activated protein kinase catalytic subunit;	99.77
2qrd_A	137	SNF1-like protein kinase SSP2; AMPK, ADP, ATP-bind	99.77
4eag_A	130	EG:132E8.2 protein; AMPK, transferase; HET: ATP TA	99.76
3t4n_A	179	Carbon catabolite-derepressing protein kinase; CBS	99.71
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.5
2ehb_D	143	CBL-interacting serine/threonine-protein kinase 2;	98.72
2zfd_B	123	Putative uncharacterized protein T20L15_90; calciu	98.35
3ost_A	128	Serine/threonine-protein kinase KCC4; kinase assoc	95.99

>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} SCOP: d.129.6.1 PDB: 1ul7_A

Probab=100.00  E-value=2.7e-42  Score=241.13  Aligned_cols=107  Identities=83%  Similarity=1.282  Sum_probs=97.6

Q ss_pred             CCCCCCCCCeEeceeeeeeeecCCCHHHHHHHHHHHHhhCCCceEEeCcEEEEeeeCCCCCCcceEEEEEEEeecCCCcc
Q psy2644          13 AVNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLN   92 (119)
Q Consensus        13 ~~~~~~~kpR~lk~~~~v~ttSsk~P~eIm~ei~rvL~~~~i~~~~~g~y~l~C~~~~~~~~~~v~fEiEVcrl~~l~l~   92 (119)
                      ...+++++||++||.|+++|||+++|++||+||++||+++||+|+++|+|+|+|.+.++.++..++||+|||+||++++|
T Consensus        14 ~~~~~~~kPR~lk~~~~v~tTS~~~P~eIm~eI~rvL~~~gi~~~~~g~y~l~C~~~~~~~~~~v~fElEVckl~~~~l~   93 (120)
T 3ose_A           14 KEEGKDSKPRSLRFTWSMKTTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQWEMEVCKLPRLSLN   93 (120)
T ss_dssp             -------CCCBCCCCTTCCCEECSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCTTTTCCEEEEEEEEEEGGGTEE
T ss_pred             ccccCCCCCcEEeceeeecCcccCCHHHHHHHHHHHHHHCCCEEEEcCCEEEEEEecCCCCCccEEEEEEEEEecCCCce
Confidence            36788999999999999999999999999999999999999999999999999999987777899999999999999999


Q ss_pred             eeeEEEecCCchhHHHHHHHHHHhcCC
Q psy2644          93 GVRFKRISGTSIGFKNIASKIANELKL  119 (119)
Q Consensus        93 gi~fkRl~Gd~~~Yk~lc~~il~~l~L  119 (119)
                      ||+|||++||+|.|++||++|+++|+|
T Consensus        94 gV~~kRi~Gd~~~yk~lc~~il~~L~L  120 (120)
T 3ose_A           94 GVRFKRISGTSIAFKNIASKIANELKL  120 (120)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHHHCCC
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999997

>1v5s_A MAP/microtubule affinity-regulating kinase 3; Ka1 domain, ELKL motif, MARK3, phosphorylation, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.129.6.1

Probab=100.00  E-value=1.6e-39  Score=228.87  Aligned_cols=111  Identities=69%  Similarity=1.049  Sum_probs=102.0

Q ss_pred             cceeee----CCCCCCCCCCeEeceeeeeeeecCCCHHHHHHHHHHHHhhCCCceEEeCcEEEEeeeCCCCCCcceEEEE
Q psy2644           6 KHNVVS----NAVNDDQVKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEI   81 (119)
Q Consensus         6 ~~~~~~----~~~~~~~~kpR~lk~~~~v~ttSsk~P~eIm~ei~rvL~~~~i~~~~~g~y~l~C~~~~~~~~~~v~fEi   81 (119)
                      -|||-+    -+-..+.++||++++.|   |||+++|++||.||+|||+++||+|+++|+|.|+|+|.++.++..|+|||
T Consensus         6 ~~~~~~~~~~~~~~~~~~~pr~lk~~f---tTSsk~P~eIm~EI~rvL~~~~i~~k~~~~y~L~C~~~~~~~~~~vkfEi   82 (126)
T 1v5s_A            6 IHNVHKEEHAHAHNKDYDIPTTENLYF---QGSSGSSGDMMREIRKVLGANNCDYEQRERFLLFCVHGDGHAENLVQWEM   82 (126)
T ss_dssp             CCCCCCCCCCCCCCCCCCCCSSSEECC---CCCCSSHHHHHHHHHHHHHHTTEEEEEEETTEEEEEECSSSTTTCEEEEE
T ss_pred             hhhhhhhhhhcccCCCcccCcEEeEEE---eecCCCHHHHHHHHHHHHHHcCCcEEEECCEEEEEEECCCCCCceEEEEE
Confidence            355554    22567889999999999   99999999999999999999999999989999999998877778999999


Q ss_pred             EEEeecCCCcceeeEEEecCCchhHHHHHHHHHHhcCC
Q psy2644          82 EVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL  119 (119)
Q Consensus        82 EVcrl~~l~l~gi~fkRl~Gd~~~Yk~lc~~il~~l~L  119 (119)
                      ||||+|++++||||||||+||+|.||++|++||++|+|
T Consensus        83 EVcKvp~l~l~GI~fKRisGd~w~YK~lc~~IL~eLkL  120 (126)
T 1v5s_A           83 EVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL  120 (126)
T ss_dssp             ECCCCTTTCSCCCEEEEEESCHHHHHHHHHHHHHHTTC
T ss_pred             EEEEecCCCceeEEEeeccCchhHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999986

>4eai_A 5'-AMP-activated protein kinase catalytic subunit linker, 5'-AMP-activated protein...; AMPK, transferase; HET: AMP; 2.29A {Rattus norvegicus} PDB: 4eaj_A* 4eak_A* 4eal_A*

Probab=99.87  E-value=4.7e-22  Score=136.00  Aligned_cols=93  Identities=17%  Similarity=0.375  Sum_probs=85.5

Q ss_pred             ceeeeeeeecCCCHHHHHHHHHHHHhhCCCceEEeCcEEEEeeeCCCCCCcceEEEEEEEeecCCCcceeeEEEecC---
Q psy2644          25 RFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISG---  101 (119)
Q Consensus        25 k~~~~v~ttSsk~P~eIm~ei~rvL~~~~i~~~~~g~y~l~C~~~~~~~~~~v~fEiEVcrl~~l~l~gi~fkRl~G---  101 (119)
                      +..|.+++.|..+|.|||.||++||+++|++|+..|+|.++|++.++.....++||+++++++. ..|.+||||++|   
T Consensus         5 ~~kW~LGIrS~~~P~eiM~eIyraLk~lg~~Wk~~~~Y~lkcR~~~~~~~~~vK~~lQLYkv~~-~~YLLDfq~i~g~~~   83 (106)
T 4eai_A            5 GAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDS-RTYLLDFRSIDDGGG   83 (106)
T ss_dssp             -CEEEESEEECSCHHHHHHHHHHHHHHHTCEEEEEETTEEEEEEECTTTCCEEEEEEEEEECSS-SCEEEEEEECCSSCC
T ss_pred             CccceEcceeCCCHHHHHHHHHHHHHHcCCEEeeCCceEEEEEEcCCCCCceeEEEEEEEEecC-CcEEEEEEeccCCCC
Confidence            4689999999999999999999999999999999999999999887655678999999999985 589999999999   


Q ss_pred             -----CchhHHHHHHHHHHhcC
Q psy2644         102 -----TSIGFKNIASKIANELK  118 (119)
Q Consensus       102 -----d~~~Yk~lc~~il~~l~  118 (119)
                           .++.|.++|+.++.+|.
T Consensus        84 ~~~~~~~~~F~d~ca~li~~la  105 (106)
T 4eai_A           84 GGGGSHTIEFFEMCANLIKILA  105 (106)
T ss_dssp             CSSSCHHHHHHHHHHHHHHHCC
T ss_pred             CCCCcCcEeHHHHHHHHHHHHh
Confidence                 59999999999999874

>2v8q_A 5'-AMP-activated protein kinase catalytic subunit; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.129.6.2 PDB: 2v92_A* 2v9j_A* 2y94_C*

Probab=99.79  E-value=1.3e-18  Score=125.70  Aligned_cols=78  Identities=17%  Similarity=0.386  Sum_probs=70.9

Q ss_pred             ceeeeeeeecCCCHHHHHHHHHHHHhhCCCceEEeCcEEEEeeeCCCCCCcceEEEEEEEeecCCCcceeeEEEecCCc
Q psy2644          25 RFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTS  103 (119)
Q Consensus        25 k~~~~v~ttSsk~P~eIm~ei~rvL~~~~i~~~~~g~y~l~C~~~~~~~~~~v~fEiEVcrl~~l~l~gi~fkRl~Gd~  103 (119)
                      +..|.+++.|..+|.|||.||+|||+++|++|+..++|.++|++..+..+..++|+++++++.. +.|.||||++.|+.
T Consensus         2 ~~kWhLGIrSrs~P~eIM~EVyRALk~Lg~eWK~~~pY~IkcRw~~~~~~~~vKm~LQLYkv~~-~~YLLDFk~l~g~~   79 (157)
T 2v8q_A            2 SMAWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDS-RTYLLDFRSIDDEI   79 (157)
T ss_dssp             CCEEEESEEECSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEECTTTCCEEEEEEEEEECSS-SCEEEEEEEECCC-
T ss_pred             CccceeecccCCCHHHHHHHHHHHHHHcCCEEeeCCCeEEEEEEcCCCCCceEEEEEEEEEecC-CCEEEEEEecCCCc
Confidence            3579999999999999999999999999999999999999999976555568999999999985 68999999999985

>2y8l_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, serine/threonine-protein KI; HET: ADP AMP; 2.50A {Rattus norvegicus} PDB: 2y8q_A* 2ya3_A*

Probab=99.77  E-value=3.3e-18  Score=125.08  Aligned_cols=80  Identities=16%  Similarity=0.357  Sum_probs=71.7

Q ss_pred             EeceeeeeeeecCCCHHHHHHHHHHHHhhCCCceEEeCcEEEEeeeCCCCCCcceEEEEEEEeecCCCcceeeEEEecCC
Q psy2644          23 SLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGT  102 (119)
Q Consensus        23 ~lk~~~~v~ttSsk~P~eIm~ei~rvL~~~~i~~~~~g~y~l~C~~~~~~~~~~v~fEiEVcrl~~l~l~gi~fkRl~Gd  102 (119)
                      .-+..|.+++.|..+|.|||.||+|||+++|++|+..++|.++|++..+..+..++|+++++|+.. +.|.||||++.||
T Consensus        14 ~k~~kWhLGIrSrs~P~eIM~EVyRALk~Lg~eWK~i~pY~IkcRw~~~~~~~~vKmeLQLYKv~~-~~YLLDFk~l~Gd   92 (173)
T 2y8l_A           14 RGSMAWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDS-RTYLLDFRSIDDE   92 (173)
T ss_dssp             --CCEEEESEEECSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEECTTTCCEEEEEEEEEECSS-SCEEEEEEEECCC
T ss_pred             cccceeeeecccCCCHHHHHHHHHHHHHHcCCEEeeCCCeEEEEEEcCCCCCeeEEEEEEEEEEcC-CCEEEEEEecCCC
Confidence            346789999999999999999999999999999999999999999976555668999999999985 7899999999998


Q ss_pred             c
Q psy2644         103 S  103 (119)
Q Consensus       103 ~  103 (119)
                      .
T Consensus        93 ~   93 (173)
T 2y8l_A           93 I   93 (173)
T ss_dssp             -
T ss_pred             c
Confidence            6

>2qrd_A SNF1-like protein kinase SSP2; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} SCOP: d.129.6.2 PDB: 2ooy_A* 2qr1_A* 2qrc_A* 2oox_A* 2qre_A*

Probab=99.77  E-value=4.3e-19  Score=126.18  Aligned_cols=95  Identities=13%  Similarity=0.213  Sum_probs=83.0

Q ss_pred             EeceeeeeeeecCCCHHHHHHHHHHHHhhCCCceEEe---------CcEEEEeeeCCCCC-----CcceEEEEEEEeecC
Q psy2644          23 SLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQR---------ERFLLLCVHGDPNT-----DSLVQWEIEVCKLPR   88 (119)
Q Consensus        23 ~lk~~~~v~ttSsk~P~eIm~ei~rvL~~~~i~~~~~---------g~y~l~C~~~~~~~-----~~~v~fEiEVcrl~~   88 (119)
                      .-+..|.+++.|..+|.|||.||+|||+++|++|+..         |+|.++|++..+..     +..++|+|+++++..
T Consensus         8 ~~~~kWhlGIRSrs~P~eIM~EVyrALk~Lg~eWk~~~~~~~~~~~~~y~Ik~R~~~~~~~~~~~~~~vkm~iQLYqv~~   87 (137)
T 2qrd_A            8 SRRNKWHFGVRCRGDAPEILLAVYRALQRAGAQFTVPKPVNGKYRSDMYTIKSRWEIPHCKREGKNTYAYIELQLYEVMP   87 (137)
T ss_dssp             ---CCCEESEEEESCHHHHHHHHHHHHHHHTCEECCCCCBTTBCCGGGGEEEEEEECHHHHHTTCCEEEEEEEEEEEEET
T ss_pred             cccCccccccccCCCHHHHHHHHHHHHHHCCCEEEeccccccccCCCceEEEEEEecCCCccccCCceEEEEEEEEEecC
Confidence            3478899999999999999999999999999999998         99999999865321     357999999999984


Q ss_pred             CCcceeeEEEecCC---------------c----hhHHHHHHHHHHhcC
Q psy2644          89 LSLNGVRFKRISGT---------------S----IGFKNIASKIANELK  118 (119)
Q Consensus        89 l~l~gi~fkRl~Gd---------------~----~~Yk~lc~~il~~l~  118 (119)
                       +.|.||||++.|+               .    +.|.++|+.++.+|.
T Consensus        88 -~~YLlDFk~~~~~~~~~~~~~~~~~~~~~~~s~~~Fldlca~Li~eLa  135 (137)
T 2qrd_A           88 -GCFMLDVKSNGYKDIYSHPERTADHGMDDLKSSFPFLDLCAMLVCKLF  135 (137)
T ss_dssp             -TEEEEEEEEEEEEESCC-------------CCCTTHHHHHHHHHHHHH
T ss_pred             -CcEEEEEEecCCccccccCccccccCCccccccccHHHHHHHHHHHHh
Confidence             7899999999999               6    999999999999874

>4eag_A EG:132E8.2 protein; AMPK, transferase; HET: ATP TAM; 2.70A {Drosophila melanogaster}

Probab=99.76  E-value=5e-18  Score=119.31  Aligned_cols=92  Identities=14%  Similarity=0.318  Sum_probs=81.4

Q ss_pred             ceeeeeeeecCCCHHHHHHHHHHHHhhCCCceEEeCcEEEEeeeCCCCCCcceEEEEEEEeecCCCcceeeEEEecCCc-
Q psy2644          25 RFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTS-  103 (119)
Q Consensus        25 k~~~~v~ttSsk~P~eIm~ei~rvL~~~~i~~~~~g~y~l~C~~~~~~~~~~v~fEiEVcrl~~l~l~gi~fkRl~Gd~-  103 (119)
                      +..|.+++.|..+|.|||.||+|||+++|++|+..|+|.++|++.++..+..++|+++++++.. ..|.+|||++.||. 
T Consensus         5 ~~kW~LGIrS~~~P~eIM~EVyrALk~Lg~eWK~~~pY~vkcR~~n~~~~~~vKm~LQLYqv~~-~~YLLDfk~~~~~~~   83 (130)
T 4eag_A            5 GAKWHLGIRSQSKPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQVDA-KSYLLDFKSLTNDEV   83 (130)
T ss_dssp             -CCEEESBCCCSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEECTTTCCEEEEEEEEEESSS-SCEEEEEEECC----
T ss_pred             ccceeeeeecCCCHHHHHHHHHHHHHHCCCEEeeCCCEEEEEEecCCCCCceeEEEEEEEEecC-CcEEEEeccCCcchh
Confidence            5689999999999999999999999999999999999999999877666678999999999986 68999999999983 


Q ss_pred             -------------------------------hhHHHHHHHHHHhc
Q psy2644         104 -------------------------------IGFKNIASKIANEL  117 (119)
Q Consensus       104 -------------------------------~~Yk~lc~~il~~l  117 (119)
                                                     +.|.++|+.++.+|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~tmeffemc~~li~~l  128 (130)
T 4eag_A           84 EQGDDVIMESLTPPPLSVSGVMPLQPTGHHTMEFFEMCAALIIQL  128 (130)
T ss_dssp             -----------------------CCCSCCHHHHHHHHHHHHHHHH
T ss_pred             hccCCccccccCCCcccccCCCCCCCCCcccChHHHHHHHHHHHH
Confidence                                           78999999998876

>3t4n_A Carbon catabolite-derepressing protein kinase; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} SCOP: d.129.6.2 PDB: 3tdh_A* 3te5_A* 2qlv_A

Probab=99.71  E-value=6e-17  Score=119.15  Aligned_cols=95  Identities=18%  Similarity=0.283  Sum_probs=83.4

Q ss_pred             eEeceeeeeeeecCCCHHHHHHHHHHHHhhCCCceEEeC---cEEEEeeeCCCC---------CCcceEEEEEEEeecCC
Q psy2644          22 RSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRE---RFLLLCVHGDPN---------TDSLVQWEIEVCKLPRL   89 (119)
Q Consensus        22 R~lk~~~~v~ttSsk~P~eIm~ei~rvL~~~~i~~~~~g---~y~l~C~~~~~~---------~~~~v~fEiEVcrl~~l   89 (119)
                      +..+..|.+++.|..+|.|||.||+|||+.+|+.|+..|   +|.++|+|..+.         ..+.++||++++++.. 
T Consensus        45 ~~~~~kW~LGIrS~~~P~eIM~EVyrALk~Lg~~WKk~~~~~pY~IkcRw~~~~~~~~~~~~~~p~~vKmeLQLYkv~~-  123 (179)
T 3t4n_A           45 KKSKTRWHFGIRSRSYPLDVMGEIYIALKNLGAEWAKPSEEDLWTIKLRWKYDIGNKTNTNEKIPDLMKMVIQLFQIET-  123 (179)
T ss_dssp             CCCCCCCEESEEECSCHHHHHHHHHHHHHHHTCEEECCCGGGTTEEEEEECC-----------CCCEEEEEEEEEEEET-
T ss_pred             CcccceeeeccccCCCHHHHHHHHHHHHHHcCCEEeeCCCCCceEEEEEEeCCCCcccccccCCCceeEEEEEEEEecC-
Confidence            445678999999999999999999999999999999988   999999986432         1356999999999986 


Q ss_pred             CcceeeEEEecC----------------------CchhHHHHHHHHHHhcC
Q psy2644          90 SLNGVRFKRISG----------------------TSIGFKNIASKIANELK  118 (119)
Q Consensus        90 ~l~gi~fkRl~G----------------------d~~~Yk~lc~~il~~l~  118 (119)
                      +.|.+||| ..|                      .++-|.++|++++.+|.
T Consensus       124 ~~YLLDfk-~~G~e~~~~~~~~~~~~~~~e~~~~s~~pFLdlca~LI~eLa  173 (179)
T 3t4n_A          124 NNYLVDFK-FDGWESSYGDDTTVSNISEDEMSTFSAYPFLHLTTKLIMELA  173 (179)
T ss_dssp             TEEEEEEE-EEEEECC----------------CCCCHHHHHHHHHHHHHHH
T ss_pred             CceEEEEE-eccccccccccccccccccccccccCCccHHHHHHHHHHHHH
Confidence            68999999 889                      88999999999998873

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.50  E-value=6.4e-14  Score=114.88  Aligned_cols=82  Identities=16%  Similarity=0.361  Sum_probs=72.7

Q ss_pred             eceeeeeeeecCCCHHHHHHHHHHHHhhCCCceEEeCcEEEEeeeCCCCCCcceEEEEEEEeecCCCcceeeEEEecCCc
Q psy2644          24 LRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTS  103 (119)
Q Consensus        24 lk~~~~v~ttSsk~P~eIm~ei~rvL~~~~i~~~~~g~y~l~C~~~~~~~~~~v~fEiEVcrl~~l~l~gi~fkRl~Gd~  103 (119)
                      -+..|.+++.|..+|.+||.||+|+|+.+|++|++.++|.++|++..+..+..++|+++++++.. +.|.|||||++|+.
T Consensus       394 ~~~~w~lgi~s~~~p~~im~ev~~al~~lg~~Wk~~~~~~i~~r~~~~~~~~~~k~~lqly~~~~-~~~llDf~~~~~~~  472 (476)
T 2y94_A          394 RKAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDS-RTYLLDFRSIDDEI  472 (476)
T ss_dssp             CCCCEEESEEECSCHHHHHHHHHHHHHTTTCBCCEEETTEEEEEEECTTTCCEEEEEEEEEECSS-SCEEEEEEEECCC-
T ss_pred             ccceeeecCccCCCHHHHHHHHHHHHHHcCCeeccCCCEEEEEEECCCCCCceEEEEEEEEEecC-CcEEEEeeecCCCc
Confidence            47889999999999999999999999999999999999999999977666778999999999985 68999999999998


Q ss_pred             hhH
Q psy2644         104 IGF  106 (119)
Q Consensus       104 ~~Y  106 (119)
                      +.|
T Consensus       473 ~~~  475 (476)
T 2y94_A          473 LEV  475 (476)
T ss_dssp             ---
T ss_pred             ccc
Confidence            876

>2ehb_D CBL-interacting serine/threonine-protein kinase 2; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana}

Probab=98.72  E-value=1.2e-07  Score=67.35  Aligned_cols=86  Identities=21%  Similarity=0.310  Sum_probs=71.0

Q ss_pred             eeecCCCHHHHHHHHHHHHhhCCCceEEeCcEEEEeeeCCCCCCcceEEEEEEEeecCCCcceeeEEEecCCchhHHHHH
Q psy2644          31 KTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIA  110 (119)
Q Consensus        31 ~ttSsk~P~eIm~ei~rvL~~~~i~~~~~g~y~l~C~~~~~~~~~~v~fEiEVcrl~~l~l~gi~fkRl~Gd~~~Yk~lc  110 (119)
                      .-||..+|++|+..|..+...+|..++.++ +.++......+.+..+.+.+||+.+.. +++.|.+++-.||+..|++++
T Consensus        37 RF~s~~~a~~ii~klEe~a~~lg~~V~kk~-~~vkl~~~~~grkG~l~v~~EVfevap-sl~vVEvrks~GD~lEy~k~~  114 (143)
T 2ehb_D           37 RFVSRREPSEIIANIEAVANSMGFKSHTRN-FKTRLEGLSSIKAGQLAVVIEIYEVAP-SLFMVDVRKAAGETLEYHKFY  114 (143)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHTTEEEEESS-SEEEEEECCSSGGGCCEEEEEEEEEET-TEEEEEEEEEESCHHHHHHHH
T ss_pred             eEEeCCCHHHHHHHHHHHHHhcCcEEEEcC-cEEEEEEecCCCcceEEEEEEEEEecC-CEEEEEEEecCCChHHHHHHH
Confidence            447899999999999999999999998766 566654322223456899999999984 799999999999999999988


Q ss_pred             HHHHHhcC
Q psy2644         111 SKIANELK  118 (119)
Q Consensus       111 ~~il~~l~  118 (119)
                      .+|-..|+
T Consensus       115 ~~Lr~~L~  122 (143)
T 2ehb_D          115 KKLCSKLE  122 (143)
T ss_dssp             HHHHHHST
T ss_pred             HHHHHHhh
Confidence            88877664

>2zfd_B Putative uncharacterized protein T20L15_90; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana}

Probab=98.35  E-value=5.8e-07  Score=62.33  Aligned_cols=82  Identities=9%  Similarity=0.132  Sum_probs=62.2

Q ss_pred             eeecCCCHHHHHHHHHHHHhhCCCceEEeCcEEEEeeeCCCCCCcceEEEEEEEeecCCCcceeeEEEecCCchhHHHHH
Q psy2644          31 KTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTSIGFKNIA  110 (119)
Q Consensus        31 ~ttSsk~P~eIm~ei~rvL~~~~i~~~~~g~y~l~C~~~~~~~~~~v~fEiEVcrl~~l~l~gi~fkRl~Gd~~~Yk~lc  110 (119)
                      .-||..+|++|+..|..+...+|..++.++ +. .+....  .+..+.+.+||+.+.. +++.|.+|+-.||+..|+++|
T Consensus        35 RF~S~~~a~~ii~klEe~a~~lg~~v~kk~-~~-~~~~~g--~kG~l~v~~EVfev~p-~l~vVEvrks~GD~lEy~~~~  109 (123)
T 2zfd_B           35 RFVSAWTAERVVERLEEIVSAENLTVAKKE-TW-GMKIEG--QKGNFAMVVEINQLTD-ELVMIEVRKRQRAAASGRDLW  109 (123)
T ss_dssp             EEEESSCHHHHHHHHHHHHHHTTCEEEEEE-TT-EEEEEE--GGGTEEEEEEEEECSS-SCEEEEEEEEESCC---CCHH
T ss_pred             EEEeCCCHHHHHHHHHHHHHHCCCEEEEcC-Cc-cccccC--CCccEEEEEEEEEecC-CEEEEEEEecCCChHHHHHHH
Confidence            447899999999999999999999998765 32 343222  1346899999999984 789999999999999999977


Q ss_pred             H-HHHHhc
Q psy2644         111 S-KIANEL  117 (119)
Q Consensus       111 ~-~il~~l  117 (119)
                      . +|-..|
T Consensus       110 ~~~L~~~L  117 (123)
T 2zfd_B          110 TDTLRPFF  117 (123)
T ss_dssp             HHTHHHHH
T ss_pred             HHHHHHHH
Confidence            5 454443

>3ost_A Serine/threonine-protein kinase KCC4; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.69A {Saccharomyces cerevisiae} PDB: 3osm_A

Probab=95.99  E-value=0.027  Score=39.12  Aligned_cols=79  Identities=15%  Similarity=0.219  Sum_probs=59.4

Q ss_pred             eeeeeeecCCCHHHHHHHHHHHHhhCCCceEEeCcEEEEeeeCCC--------------CCCcceEEEEEEEeecCCCc-
Q psy2644          27 TWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDP--------------NTDSLVQWEIEVCKLPRLSL-   91 (119)
Q Consensus        27 ~~~v~ttSsk~P~eIm~ei~rvL~~~~i~~~~~g~y~l~C~~~~~--------------~~~~~v~fEiEVcrl~~l~l-   91 (119)
                      .|++..-+..+-.++..||.+.|.    .|++   |.|+=.+.|.              .+=..+.|++||+  ++-++ 
T Consensus        24 ~~d~~l~t~v~k~~~~~~L~~LL~----~Wk~---yGlkdv~~D~~~~~ItGrvs~~N~L~LRsv~F~i~i~--~~gn~~   94 (128)
T 3ost_A           24 ILELEIHAKIPEKRLYEGLHKLLE----GWKQ---YGLKNLVFNITNMIITGKLVNDSILFLRSTLFEIMVL--PNGDGR   94 (128)
T ss_dssp             ECSCCEEESSCHHHHHHHHHHHHH----TCGG---GTEEEEEEETTTTEEEEEECCCCSSSCCCEEEEEEEE--ECSTTC
T ss_pred             CccEEEEEecCHHHHHHHHHHHHH----HHHH---hCccceEecCCCCEEEEEEccccccccceeEEEEEEe--ecCCce
Confidence            478888889999999999999999    5653   3233322221              1224699999999  44455 


Q ss_pred             ceeeEEEecCCchhHHHHHHHHH
Q psy2644          92 NGVRFKRISGTSIGFKNIASKIA  114 (119)
Q Consensus        92 ~gi~fkRl~Gd~~~Yk~lc~~il  114 (119)
                      --|+|++.+|.+-.|..+.++|=
T Consensus        95 Slv~f~q~rGSsstf~klv~eiE  117 (128)
T 3ost_A           95 SLIKFNKKTGSTKTLTKLATEIQ  117 (128)
T ss_dssp             EEEEEEESSSCHHHHHHHHHHHH
T ss_pred             EEEEEEEeeccHHHHHHHHHHHH
Confidence            67999999999999999998763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	119
d1ul7a_	102	d.129.6.1 (A:) Map/microtubule affinity-regulating	4e-50

>d1ul7a_ d.129.6.1 (A:) Map/microtubule affinity-regulating kinase 3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 102

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: KA1-like
family: Kinase associated domain 1, KA1
domain: Map/microtubule affinity-regulating kinase 3
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  152 bits (386), Expect = 4e-50
 Identities = 82/100 (82%), Positives = 89/100 (89%)

Query: 20  KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQW 79
              S RFTWSMKTTSS DP+++M EIRKVL ANNCDYEQRERFLL CVHGD + ++LVQW
Sbjct: 3   SGSSGRFTWSMKTTSSMDPSDMMREIRKVLGANNCDYEQRERFLLFCVHGDGHAENLVQW 62

Query: 80  EIEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIANELKL 119
           E+EVCKLPRLSLNGVRFKRISGTSI FKNIASKIANELKL
Sbjct: 63  EMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL 102

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	119
d1ul7a_	102	Map/microtubule affinity-regulating kinase 3 {Mous	100.0
d2v8qa1	153	5'-AMP-activated protein kinase catalytic subunit	99.76
d2qlva1	171	Carbon catabolite-derepressing protein kinase SNF1	99.56
d2qrda1	127	Snf1-like protein kinase ssp2 {Schizosaccharomyces	99.54

>d1ul7a_ d.129.6.1 (A:) Map/microtubule affinity-regulating kinase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: KA1-like
family: Kinase associated domain 1, KA1
domain: Map/microtubule affinity-regulating kinase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.6e-42  Score=233.78  Aligned_cols=101  Identities=81%  Similarity=1.243  Sum_probs=98.6

Q ss_pred             CCCeEeceeeeeeeecCCCHHHHHHHHHHHHhhCCCceEEeCcEEEEeeeCCCCCCcceEEEEEEEeecCCCcceeeEEE
Q psy2644          19 VKPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKR   98 (119)
Q Consensus        19 ~kpR~lk~~~~v~ttSsk~P~eIm~ei~rvL~~~~i~~~~~g~y~l~C~~~~~~~~~~v~fEiEVcrl~~l~l~gi~fkR   98 (119)
                      ++||++||+|+|+|||+++|++||+||++||+++||+|+++|+|.++|.|.++.++..|+||||||++|++++|||+|||
T Consensus         2 ~~~~~~rf~wsv~tTS~~~P~eIm~eI~rvL~~lgv~~~~~g~y~l~c~~~~~~~~~~v~fEieV~kv~~~~l~gv~~kR   81 (102)
T d1ul7a_           2 SSGSSGRFTWSMKTTSSMDPSDMMREIRKVLGANNCDYEQRERFLLFCVHGDGHAENLVQWEMEVCKLPRLSLNGVRFKR   81 (102)
T ss_dssp             CCCCCCCCCCCCCCCBCSCHHHHHHHHHHHHHHTTCEEEECSTTCEEEEECSSCGGGCEEEEEEEEECSSSSSEEEEEEE
T ss_pred             CCCCCcceeeeeecCcCCCHHHHHHHHHHHHHHcCcEEEEcCCEEEEEEecCCCCCceEEEEEEEEEcCCCceEEEEEEE
Confidence            68999999999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             ecCCchhHHHHHHHHHHhcCC
Q psy2644          99 ISGTSIGFKNIASKIANELKL  119 (119)
Q Consensus        99 l~Gd~~~Yk~lc~~il~~l~L  119 (119)
                      ++||+|.|+++|++|+++|+|
T Consensus        82 ~~Gd~~~yk~l~~~il~~l~l  102 (102)
T d1ul7a_          82 ISGTSIAFKNIASKIANELKL  102 (102)
T ss_dssp             EESCHHHHHHHHHHHHHHCCC
T ss_pred             ccCCHHHHHHHHHHHHHhccC
Confidence            999999999999999999997

>d2v8qa1 d.129.6.2 (A:396-548) 5'-AMP-activated protein kinase catalytic subunit alpha-1, AMPK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: KA1-like
family: Ssp2 C-terminal domain-like
domain: 5'-AMP-activated protein kinase catalytic subunit alpha-1, AMPK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.76  E-value=3.1e-18  Score=121.30  Aligned_cols=75  Identities=17%  Similarity=0.392  Sum_probs=70.3

Q ss_pred             eeeeeecCCCHHHHHHHHHHHHhhCCCceEEeCcEEEEeeeCCCCCCcceEEEEEEEeecCCCcceeeEEEecCCc
Q psy2644          28 WSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNTDSLVQWEIEVCKLPRLSLNGVRFKRISGTS  103 (119)
Q Consensus        28 ~~v~ttSsk~P~eIm~ei~rvL~~~~i~~~~~g~y~l~C~~~~~~~~~~v~fEiEVcrl~~l~l~gi~fkRl~Gd~  103 (119)
                      |.+++.|...|.|||.||+|+|+++|++|+..++|.++|++..+..+..++|+|+++++.. +.|.+|||++.|+.
T Consensus         1 WhlGIrS~s~P~dIM~eVyrALk~L~~eWk~~~~y~ir~R~~~~~~~~~~Km~lQLYqv~~-~~YLLDfk~i~~~~   75 (153)
T d2v8qa1           1 WHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDS-RTYLLDFRSIDDEI   75 (153)
T ss_dssp             EEESEEECSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEECTTTCCEEEEEEEEEECSS-SCEEEEEEEECCC-
T ss_pred             CccccccCCCHHHHHHHHHHHHHHcCCeEEecCceEEEEEEECCCCCceeEEEEEEEEEcC-CceEEEeeecCcch
Confidence            8899999999999999999999999999999999999999998777889999999999995 78999999998873

>d2qlva1 d.129.6.2 (A:460-630) Carbon catabolite-derepressing protein kinase SNF1 {Saccharomyces cerevisiae [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: KA1-like
family: Ssp2 C-terminal domain-like
domain: Carbon catabolite-derepressing protein kinase SNF1
species: Saccharomyces cerevisiae [TaxId: 4932]

Probab=99.56  E-value=9.5e-15  Score=105.26  Aligned_cols=98  Identities=16%  Similarity=0.226  Sum_probs=74.1

Q ss_pred             CCeEeceeeeeeeecCCCHHHHHHHHHHHHhhCCCceEEe---CcEEEEeeeCCC---------CCCcceEEEEEEEeec
Q psy2644          20 KPRSLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQR---ERFLLLCVHGDP---------NTDSLVQWEIEVCKLP   87 (119)
Q Consensus        20 kpR~lk~~~~v~ttSsk~P~eIm~ei~rvL~~~~i~~~~~---g~y~l~C~~~~~---------~~~~~v~fEiEVcrl~   87 (119)
                      .++.-|..|.+++.|..+|.|||.||+|||.++|++|+..   |+|.++|+|..+         ..++.|+|+|+++++.
T Consensus        38 ~~k~~~~kWhfGIRSrs~P~eiM~evykALk~Lg~eWk~~~~~~~~~ir~Rwk~~~~~~~~~~~~~~~~vk~~iQLYqv~  117 (171)
T d2qlva1          38 VTKKSKTRWHFGIRSRSYPLDVMGEIYIALKNLGAEWAKPSEEDLWTIKLRWKYDIGNKTNTNEKIPDLMKMVIQLFQIE  117 (171)
T ss_dssp             CC----CCCEESEEECSCHHHHHHHHHHHHHHHTCEECCCC---CCEEEEEEC--------------CEEEEEEEEEC--
T ss_pred             CCCcccceeeeecccCCCHHHHHHHHHHHHHHcCCEEeecCCCCceEEEEEeecCCCcccccCCCCCceEEEEEEEEEEc
Confidence            3455567899999999999999999999999999999875   479999998632         2245799999999998


Q ss_pred             CCCcceeeEEEecC---------------------CchhHHHHHHHHHHhcC
Q psy2644          88 RLSLNGVRFKRISG---------------------TSIGFKNIASKIANELK  118 (119)
Q Consensus        88 ~l~l~gi~fkRl~G---------------------d~~~Yk~lc~~il~~l~  118 (119)
                      . +.|.||||-..+                     .++-|.++|++++.+|.
T Consensus       118 ~-~~YLlDFK~~g~e~~~~~~~~~~~~~~~e~~~~Sp~pFldlca~LI~qLA  168 (171)
T d2qlva1         118 T-NNYLVDFKFDGWESSYGDDTTVSNISEDEMSTFSAYPFLHLTTKLIMELA  168 (171)
T ss_dssp             --CCEEEEEEEEEEEC--------------CHHHHTSHHHHHHHHHHHHHHH
T ss_pred             C-CceEEEEecCCccccccccccccccCCCcccCcCCccHHHHHHHHHHHHh
Confidence            5 689999984322                     24679999999998873

>d2qrda1 d.129.6.2 (A:450-576) Snf1-like protein kinase ssp2 {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: KA1-like
family: Ssp2 C-terminal domain-like
domain: Snf1-like protein kinase ssp2
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=99.54  E-value=1.1e-14  Score=100.55  Aligned_cols=90  Identities=13%  Similarity=0.250  Sum_probs=76.4

Q ss_pred             eeeeeeecCCCHHHHHHHHHHHHhhCCCceEEeCc---------EEEEeeeCCC-----CCCcceEEEEEEEeecCCCcc
Q psy2644          27 TWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRER---------FLLLCVHGDP-----NTDSLVQWEIEVCKLPRLSLN   92 (119)
Q Consensus        27 ~~~v~ttSsk~P~eIm~ei~rvL~~~~i~~~~~g~---------y~l~C~~~~~-----~~~~~v~fEiEVcrl~~l~l~   92 (119)
                      .|..++.|...|.|||.||+|||.++|.+|+..++         |.++|++..+     ...+.++++|+++++.. +.|
T Consensus         2 KWhfGIRSrs~P~eiM~eVYrALk~Lg~eWk~~~~~~~~~~~d~y~Ir~R~~~~~~~~~~~~~~vkm~iQLYqve~-~~Y   80 (127)
T d2qrda1           2 KWHFGVRCRGDAPEILLAVYRALQRAGAQFTVPKPVNGKYRSDMYTIKSRWEIPHCKREGKNTYAYIELQLYEVMP-GCF   80 (127)
T ss_dssp             CCEESEEEESCHHHHHHHHHHHHHHHTCEECCCCCBTTBCCGGGGEEEEEEECHHHHHTTCCEEEEEEEEEEEEET-TEE
T ss_pred             CceeccccCCChHHHHHHHHHHHHHcCCEEeecCcccccccCCceEEEEEeecCCccccCCCceEEEEEEEEEEcC-CcE
Confidence            58999999999999999999999999999998776         9999997642     23457999999999996 789


Q ss_pred             eeeEE------EecCC-------------chhHHHHHHHHHHhc
Q psy2644          93 GVRFK------RISGT-------------SIGFKNIASKIANEL  117 (119)
Q Consensus        93 gi~fk------Rl~Gd-------------~~~Yk~lc~~il~~l  117 (119)
                      .||||      +.++.             ++-|.++|++++.+|
T Consensus        81 LlDFK~dg~e~~~~~~~~~~~~~~~~~~s~~pFldl~a~LI~qL  124 (127)
T d2qrda1          81 MLDVKSNGYKDIYSHPERTADHGMDDLKSSFPFLDLCAMLVCKL  124 (127)
T ss_dssp             EEEEEEEEEEESCC-------------CCCTTHHHHHHHHHHHH
T ss_pred             EEEEccCCcccccCCccccccCccccccCCccHHHHHHHHHHHH
Confidence            99999      33333             467999999999886