Psyllid ID: psy2702

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-------
Protein Sequence
MPDLMREEKPDLMQEGKPDLMKDELPALMKEEKPDLMKDAKYDLMKNELLDLMQKEKPDLVQEEMSDLMKHKMSVLMKDEKSVRPET
Secondary Structure (PSIPRED)
cccHHHHcccccHHccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHcccHHHHcccccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHccccccccccc
Coil and Loop (DISEMBL)
mpdlmreekpdlmqegkpdlmkdelpalmkeekpdlmkdaKYDLMKNELLDLMQKEKPDLVQEEMSDLMKHKMSVLMkdeksvrpet
Flexible Loop (DISEMBL)
mpdlmreekpdlmqegkpdlmkDELPALMKEEKPDLMKDAKYDLMKNELLDLMQKEKPDLVQEEMSDLMKHKmsvlmkdeksvrpet
Low Complexity Region (SEG)
MPDLMREEKPDLMQEGKPDLMKDELPALMKEEKPDLMKDAKYDLMKNELLDLMQKEKPDLVQEEMSDLMKHKMSVLMKDEKSVRPET
Disordered region (IsUnstruct)
***************************************************************************************
Disordered Region (DISOPRED)
**************************************DAKYDLMKNEL*******************MKHKMSVL***********
Disordered Region (DISEMBL)
************MQEGKPDLMKDELPALMKEEKPDLMKDAKYDLMKNELLDLMQKEKPDLVQEEMSDLMKHKMSVLM**********
Disordered Region (DISPRO)
*PDLMREEKPDLMQEGKPDLMKDELPALMKEEKPDLMKDAKYDLMKNELLDLMQKEKPDLVQEEMSDLMKHKMS*L***********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPDLMREEKPDLMQEGKPDLMKDELPALMKEEKPDLMKDAKYDLMKNELLDLMQKEKPDLVQEEMSDLMKHKMSVLMKDEKSVRPET
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

No hits with e-value below 0.001 by BLAST

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	87
GENEDB_PFALCIPARUM|MAL7P1.144	845	MAL7P1.144 "protein kinase, pu	0.885	0.091	0.379	1.9e-07
UNIPROTKB|C0H4P3	845	FIKK7.1 "Serine/Threonine prot	0.885	0.091	0.379	1.9e-07
WB|WBGene00006436	18	ttn-1 [Caenorhabditis elegans	0.908	4.388	0.341	0.00016
UNIPROTKB|F1P4Z1	1035	MAP1B "Uncharacterized protein	0.919	0.077	0.294	0.00082

GENEDB_PFALCIPARUM|MAL7P1.144 MAL7P1.144 "protein kinase, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 131 (51.2 bits), Expect = 1.9e-07, P = 1.9e-07
 Identities = 30/79 (37%), Positives = 54/79 (68%)

Query:     3 DLMREEKPDLMQEGKPDLMKDELPALMKEEKPDLMKDAKYDLMKNELLDLMQKEKPDLVQ 62
             DL++ ++ DL++  + DL+K++   L+K  K DL+K+ + DL+KNE  DL+ K K DL++
Sbjct:    84 DLLKNKEDDLLKNKEGDLLKNKEGDLLKN-KGDLLKNEEGDLLKNEEGDLL-KNKGDLIK 141

Query:    63 EEMSDLMKHKMSVLMKDEK 81
              +  DL+K K   L+K+++
Sbjct:   142 NKEGDLLKSKEGDLIKNKE 160

GO:0020011 "apicoplast" evidence=RCA

UNIPROTKB|C0H4P3 FIKK7.1 "Serine/Threonine protein kinase, FIKK family" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 131 (51.2 bits), Expect = 1.9e-07, P = 1.9e-07
 Identities = 30/79 (37%), Positives = 54/79 (68%)

Query:     3 DLMREEKPDLMQEGKPDLMKDELPALMKEEKPDLMKDAKYDLMKNELLDLMQKEKPDLVQ 62
             DL++ ++ DL++  + DL+K++   L+K  K DL+K+ + DL+KNE  DL+ K K DL++
Sbjct:    84 DLLKNKEDDLLKNKEGDLLKNKEGDLLKN-KGDLLKNEEGDLLKNEEGDLL-KNKGDLIK 141

Query:    63 EEMSDLMKHKMSVLMKDEK 81
              +  DL+K K   L+K+++
Sbjct:   142 NKEGDLLKSKEGDLIKNKE 160

GO:0020011 "apicoplast" evidence=RCA

WB|WBGene00006436 ttn-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
 Identities = 27/79 (34%), Positives = 42/79 (53%)

Query:     3 DLMREEKPDLMQEGKPDLMKDELPALMKEEKPDLMKDAKYDLMKNELLDLMQKEKPDLVQ 62
             D ++ E    +Q+ K D  K E  A +++EK D +K  K D  K E    +QKEK D ++
Sbjct:  7587 DKLKHEADAKLQKEKDDNFKQEANAKLQKEKDDKLKQEKDDNFKQEANAKLQKEKDDKLK 7646

Query:    63 EEMSDLMKHKMSVLMKDEK 81
             +E  D +K +    +K EK
Sbjct:  7647 QEKDDKLKQEADAKLKKEK 7665

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0031674 "I band" evidence=IDA

GO:0031672 "A band" evidence=IDA

UNIPROTKB|F1P4Z1 MAP1B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 98 (39.6 bits), Expect = 0.00082, P = 0.00082
 Identities = 25/85 (29%), Positives = 47/85 (55%)

Query:     7 EEKPDLMQEGKPDLMK-DELPALMKEEKP---DLMKDAKYDLMKNELLDLMQKEKPDLVQ 62
             EEK D  ++ K ++ K +E P + KEEKP   D+ K+ K ++ K E  +  ++ K +   
Sbjct:   646 EEKKDEKEKPKKEVSKKEEKPLIKKEEKPKKEDIKKEVKKEVKKEEKKEAKKEVKKEAPP 705

Query:    63 EEMS-DLMKHKMSVLMKDEKSVRPE 86
             +E   ++ K +   + K+EK V+ +
Sbjct:   706 KEAKKEVKKEEKKEIKKEEKEVKKD 730


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.130   0.347    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       87        87   0.00091  102 3  11 23  0.39    30
                                                     29  0.48    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  345 (37 KB)
  Total size of DFA:  68 KB (2063 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.96u 0.07s 14.03t   Elapsed:  00:00:14
  Total cpu time:  13.96u 0.07s 14.03t   Elapsed:  00:00:14
  Start:  Thu Aug 15 14:36:05 2013   End:  Thu Aug 15 14:36:19 2013

GO:0000226 "microtubule cytoskeleton organization" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00