Psyllid ID: psy2719
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 808 | 2.2.26 [Sep-21-2011] | |||||||
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | N/A | 0.646 | 0.712 | 0.302 | 1e-76 | |
| Q9SYM4 | 942 | Alpha,alpha-trehalose-pho | yes | N/A | 0.556 | 0.477 | 0.339 | 7e-64 | |
| P40387 | 513 | Alpha,alpha-trehalose-pho | yes | N/A | 0.488 | 0.769 | 0.323 | 2e-63 | |
| Q07158 | 488 | Alpha,alpha-trehalose-pho | yes | N/A | 0.530 | 0.879 | 0.312 | 2e-62 | |
| A7MEE9 | 474 | Alpha,alpha-trehalose-pho | yes | N/A | 0.459 | 0.782 | 0.346 | 8e-62 | |
| Q00075 | 517 | Alpha,alpha-trehalose-pho | yes | N/A | 0.475 | 0.742 | 0.311 | 8e-62 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | N/A | 0.631 | 0.620 | 0.311 | 9e-62 | |
| O59921 | 504 | Alpha,alpha-trehalose-pho | yes | N/A | 0.475 | 0.761 | 0.314 | 9e-62 | |
| A4WBR1 | 474 | Alpha,alpha-trehalose-pho | yes | N/A | 0.461 | 0.786 | 0.340 | 9e-61 | |
| Q00764 | 495 | Alpha,alpha-trehalose-pho | yes | N/A | 0.475 | 0.775 | 0.317 | 4e-60 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 288 bits (738), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 194/641 (30%), Positives = 298/641 (46%), Gaps = 119/641 (18%)
Query: 110 IWIGWSGLYDLAPDEVIPEADPNDQAPTSGL--TSSQVIPVHVDKDEFEAYYNGCCNGTF 167
IW+GW G E + +D+ L IPV + + +YNG NG
Sbjct: 58 IWVGWIG----------AEIEEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVL 107
Query: 168 WPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDY 227
WPLFH +P ++ W +Y + NE+F++ L+ DL VW+HDY
Sbjct: 108 WPLFHYLPGDLDYDDRIWNSYVEANEQFSSVVAEILKP--NDL-----------VWVHDY 154
Query: 228 QLLVAATTIRQVAYD----------------------------------FVGFHIEDYCL 253
+++ ++Q D +GFH DY
Sbjct: 155 HMMLLPEILKQKKPDARIGFFLHIPFPSSEIFRVLPCRKEILLGILNCCLIGFHTYDYAR 214
Query: 254 NFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQ-----LAENAPENLKD 308
+F+ C R +G N V R V V P+GI ++F + +N + LK+
Sbjct: 215 HFLKSCTRIVGLETAPNG--VYFKDRFVQVGVFPVGIDPDKFFESLKTTQVQNRIKELKE 272
Query: 309 --ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKAL 366
E KV++G+DRLDY KG+ +++A ERL +K+PE+ K+ +Q++VPSR DV EY+ L
Sbjct: 273 SFEGTKVLIGIDRLDYIKGIPQKLQAIERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKL 332
Query: 367 KDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKE 426
K E+++LVGRING + +SPI Y+F + EL ALY S AL+T +RDGMNLVA+E
Sbjct: 333 KKEVEELVGRINGLYGSIGYSPIHYLFQSVDPSELTALYNISDAALITSIRDGMNLVAQE 392
Query: 427 YVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMSQL 486
Y+ CQ GVLILS F GA + A+++NP+ + A+ +H +L MP +ERE + L
Sbjct: 393 YIVCQTENNGVLILSEFTGAAQSLSGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQML 452
Query: 487 RHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQLTLDDFDLYLNNYVDGNCKLSL 546
+ +HW F+ + ++ D K + + D + ++ Y +L L
Sbjct: 453 LKYVTKHTASHWGLGFVKELNKASSNTD------KMVTIQKLDIEKVVDIYKQSKRRL-L 505
Query: 547 ILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMS 606
I YDGTL P + P L+ S+E + L+N P ++ I+SGR D +S
Sbjct: 506 IFAYDGTLIPYNNVPQLSRPSQELLNSFDILSNDPKTDVYILSGR---------DKKTLS 556
Query: 607 EETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVHPV 666
E +GI G + E +G P+ T++ V
Sbjct: 557 EWF--------------LGIQIGLSAE----------------YGCFFKLPESTEWEQQV 586
Query: 667 PK---EYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYR 704
P + E +R L K + G++ E K +L T+HYR
Sbjct: 587 PSMDLSWKETIRPLFKYFT--LRTPGSFFEEKEMLFTWHYR 625
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 246 bits (627), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 188/554 (33%), Positives = 262/554 (47%), Gaps = 104/554 (18%)
Query: 106 EITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNG 165
E WIGW+G+ PDEV +A + L + IPV +D++ YYNG CN
Sbjct: 131 EFEARWIGWAGVN--VPDEV------GQKALSKALAEKRCIPVFLDEEIVHQYYNGYCNN 182
Query: 166 TFWPLFHSM----PDRAV----FNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTN 217
WPLFH + DR F ++ + Y K N+ FA+ V+ + G
Sbjct: 183 ILWPLFHYLGLPQEDRLATTRSFQSQ-FAAYKKANQMFAD--------VVNEHYEEGD-- 231
Query: 218 VVPVVWIHDYQLLVAATTIRQ----------------------------------VAYDF 243
VVW HDY L+ +++ +A D
Sbjct: 232 ---VVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADL 288
Query: 244 VGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAP 303
VGFH DY +F+ C R LG ++ VE GR V A PIGI +RF++ E P
Sbjct: 289 VGFHTYDYARHFVSACTRILG--LEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALE-VP 345
Query: 304 E------NLKDE--NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVP 355
E LK+ KV+LGVDRLD KG+ +I AFE+ LE++ + +KV LQI+VP
Sbjct: 346 EVIQHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVP 405
Query: 356 SRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTP 415
+RTDV EY+ L ++ ++VGRINGRF PI ++ + L ALY + +ALVT
Sbjct: 406 TRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTS 465
Query: 416 LRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHE-ALLVNPYEIDAAANVLHRALCM 474
LRDGMNLV+ E+VACQ + GVLILS FAGA + A+LVNP+ I A + +AL M
Sbjct: 466 LRDGMNLVSYEFVACQEAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNM 525
Query: 475 PRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQLTLDDFDLYL 534
+ERE R H + W +F+S L++ L + L D +
Sbjct: 526 TAEEREKRHRHNFHHVKTHTAQEWAETFVSE---LNDTVIEAQLRISKVPPELPQHDA-I 581
Query: 535 NNYVDGNCKLSLILDYDGTLTP----------------LTSHPDLAVMSEETKRVLERLA 578
Y N +L LIL ++ TLT L HP+L K L+ L
Sbjct: 582 QRYSKSNNRL-LILGFNATLTEPVDNQGRRGDQIKEMDLNLHPEL-------KGPLKALC 633
Query: 579 NMPDVNIGIISGRT 592
+ P I ++SG +
Sbjct: 634 SDPSTTIVVLSGSS 647
|
Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|P40387|TPS1_SCHPO Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tps1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/463 (32%), Positives = 221/463 (47%), Gaps = 68/463 (14%)
Query: 100 MNGVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYY 159
++G+ +T W+GW G + IPE D IPV +D + + +Y
Sbjct: 53 LSGLKKLMTFQWLGWCG-------QEIPE-DEKPMIIQRLQDECSAIPVFLDDETADRHY 104
Query: 160 NGCCNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVV 219
NG N WPLFH P F+ E W+ Y N FA ++K+L
Sbjct: 105 NGFSNSILWPLFHYHPGEINFDEENWEAYRAANYAFAEA-------IVKNLQDGD----- 152
Query: 220 PVVWIHDYQLLVAATTIRQVA--------------------------------------Y 241
++W+ DY L+V +R++
Sbjct: 153 -LIWVQDYHLMVLPQMLRELIGDKFKDIKIGFFLHTPFPSSEIYRVLPVRNEILEGVLNC 211
Query: 242 DFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAEN 301
D VGFH DY +F+ C R L N VE G+ V V PIGI E+F ++
Sbjct: 212 DLVGFHTYDYARHFLSACSRILNLSTLPNG--VEYNGQMVSVGTFPIGIDPEKFSDALKS 269
Query: 302 -------APENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354
A + + +KVI+GVDRLDY KG+ + AFE LE++PE+V KV +Q++V
Sbjct: 270 DVVKDRIASIERRLQGVKVIVGVDRLDYIKGVPQKFHAFEVFLEQYPEWVGKVVLVQVAV 329
Query: 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVT 414
PSR DV EY+ L+ +++LVGRINGRF ++PI ++ + EEL ALY S + L+T
Sbjct: 330 PSRQDVEEYQNLRAVVNELVGRINGRFGTVEYTPIHFLHKSVRFEELVALYNVSDVCLIT 389
Query: 415 PLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCM 474
RDGMNLV+ EY+ Q G LILS FAGA ++ ++++NP+ + AN +H AL M
Sbjct: 390 STRDGMNLVSYEYICTQQERHGALILSEFAGAAQSLNGSIVINPWNTEELANSIHDALTM 449
Query: 475 PRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDP 517
P +RE ++L + W SF+ + + + P
Sbjct: 450 PEKQREANENKLFRYVNKYTSQFWGQSFVGELQRIQHYSHPHP 492
|
Appears to have a role in spore germination. In S.pombe it appears to have no role in the control of the initial steps of glycolysis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q07158|TPS1_KLULA Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TPS1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 241/522 (46%), Gaps = 93/522 (17%)
Query: 41 DQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVFNAETWKVSHLKM 100
++ P S + S +PV + KDE Y +SM + A +
Sbjct: 12 NECPGSVIVISNRLPVTIKKDEKTGEYE-----------YSMSSGGLVTA---------L 51
Query: 101 NGVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSG--LTSSQVIPVHVDKDEFEAY 158
G+ T W GW GL PDE D+A L IP+ + + + +
Sbjct: 52 QGLKKSTTFQWYGWPGLE--VPDE--------DKAKVKRELLEKFNAIPIFLSDEVADLH 101
Query: 159 YNGCCNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNV 218
YNG N WPLFH P F+ W Y + N FA+ + G N
Sbjct: 102 YNGFSNSILWPLFHYHPGEITFDDTAWLAYNEANMAFAD-------------EIEGNIND 148
Query: 219 VPVVWIHDYQLLVAATTIRQ---------------------------------------V 239
VVW+HDY L++ IRQ +
Sbjct: 149 NDVVWVHDYHLMLLPEMIRQRVIAKKLKNIKIGWFLHTPFPSSEIYRILPVRQEILKGVL 208
Query: 240 AYDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQ-L 298
+ D +GFH DY +F+ R L N VE GR V+V A PIGI E F + L
Sbjct: 209 SCDLIGFHTYDYARHFLSAVQRILNVNTLPNG--VEFDGRFVNVGAFPIGIDVETFTEGL 266
Query: 299 AENAP----ENLKD--ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQI 352
++A + LK+ + K+I+GVDRLDY KG+ ++ A E L HPE++ KV +Q+
Sbjct: 267 KQDAVIKRIKELKESFKGCKIIIGVDRLDYIKGVPQKLHALEVFLGAHPEWIGKVVLVQV 326
Query: 353 SVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIAL 412
+VPSR DV EY+ L+ +++LVGRING+F + PI ++ I +EL +LY S + L
Sbjct: 327 AVPSRGDVEEYQYLRSVVNELVGRINGQFGTAEFVPIHFMHRSIPFQELISLYAVSDVCL 386
Query: 413 VTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRAL 472
V+ RDGMNLV+ EY++CQ + G LILS F GA ++ AL+VNP+ D A ++ AL
Sbjct: 387 VSSTRDGMNLVSYEYISCQEEKKGTLILSEFTGAAQSLNGALIVNPWNTDDLAESINEAL 446
Query: 473 CMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDD 514
+P ++R +L + W +F+ + L + ++
Sbjct: 447 TVPEEKRAANWEKLYKYISKYTSAFWGENFVHELYRLGSSNN 488
|
Appears to play a role in controlling and restricting the influx of sugar into glycolysis, probably at the level of hexokinase. Necessary for trehalose-6-phosphate synthase and phosphatase activities. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|A7MEE9|OTSA_CROS8 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=otsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 239 bits (609), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 153/442 (34%), Positives = 219/442 (49%), Gaps = 71/442 (16%)
Query: 109 GIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVI--PVHVDKDEFEAYYNGCCNGT 166
G+W GWSG E+ N+ AP +T + ++ + + + YYN NG
Sbjct: 37 GLWFGWSG-------EI-----GNEDAPLKKVTRDNITWASFNLSEQDHDQYYNQFSNGV 84
Query: 167 FWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHD 226
WP FH D F E W+ Y +VN A+ L+ +I+ D +WIHD
Sbjct: 85 LWPAFHYRLDLVNFQREAWEGYLRVNSLLAD----KLKPLIEPDDN---------LWIHD 131
Query: 227 YQLLVAATTIRQVA----------------------------------YDFVGFHIEDYC 252
Y LL A+ +R+ YD +GF E+
Sbjct: 132 YHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPTNTELLEQLCDYDLLGFQTENDR 191
Query: 253 LNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAP-----ENLK 307
F+DC + + G+T + PIGI E Q A P LK
Sbjct: 192 TAFLDCLAMQTHLSTSSDGEYTAY-GKTFRTEVYPIGIEPEEIAQ-ASAGPLPPKLAQLK 249
Query: 308 DE--NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKA 365
E ++K I V+RLDY+KGL R +AFE LLEK+PE+ K+ + QI+ SR DV Y+
Sbjct: 250 AELASVKNIFSVERLDYSKGLPERFQAFETLLEKYPEHHGKIRYTQIAPTSRGDVQAYQD 309
Query: 366 LKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAK 425
++ +++ GRING++ + W+P+ Y+ ++ L ++R S + LVTPLRDGMNLVAK
Sbjct: 310 IRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKVFRYSDVGLVTPLRDGMNLVAK 369
Query: 426 EYVACQ-IREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMS 484
EYVA Q + PGVL+LS FAGA + ALLVNPY+ D A L RAL MP ER R S
Sbjct: 370 EYVAAQDPKNPGVLVLSQFAGAANELTAALLVNPYDRDDVAAALDRALKMPLAERIARHS 429
Query: 485 QLRHREQQLDVNHWMNSFLSSM 506
++ ++ D+NHW +F+ +
Sbjct: 430 EMLEIVRKNDINHWQEAFIKDL 451
|
Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor. Cronobacter sakazakii (strain ATCC BAA-894) (taxid: 290339) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00075|TPSA_ASPNG Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Aspergillus niger GN=tpsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 239 bits (609), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 220/452 (48%), Gaps = 68/452 (15%)
Query: 100 MNGVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYY 159
++G++ T W GW GL P+E IP + + +PV +D + + +Y
Sbjct: 47 LSGLSKSTTFQWYGWPGLE--VPEEEIPVVKERLKQEYNA------VPVFIDDELADRHY 98
Query: 160 NGCCNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVV 219
NG N WPLFH P F+ W+ Y + N FA A+ ++D D
Sbjct: 99 NGFSNSILWPLFHYHPGEITFDESAWEAYKEANRLFAK----AVAKEVQDGD-------- 146
Query: 220 PVVWIHDYQLLVAATTIRQ--------------------------------------VAY 241
++W+HDY L++ +R+ +
Sbjct: 147 -LIWVHDYHLMLLPEMLREEIGDSKENVKIGFFLHTPFPSSEIYRILPVRNELLLGVLHC 205
Query: 242 DFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAEN 301
D +GFH DY +F+ C R LG N +E G+ + A PIGI E+F + +
Sbjct: 206 DLIGFHTYDYTRHFLSACSRLLGLTTTPNG--IEFQGKIIACGAFPIGIDPEKFEEGLKK 263
Query: 302 -------APENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354
A K + +K+++GVDRLDY KG+ ++ A E L HPE+V KV +Q++V
Sbjct: 264 EKVQKRIAMLEQKFQGVKLMVGVDRLDYIKGVPQKLHALEVFLSDHPEWVGKVVLVQVAV 323
Query: 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVT 414
PSR DV EY+ L+ +++LVGRING+F + PI ++ + +EL ALY S +V+
Sbjct: 324 PSRQDVEEYQNLRAVVNELVGRINGKFGTVEFMPIHFLHKSVNFDELIALYAVSDACIVS 383
Query: 415 PLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCM 474
RDGMNLVA EY+A Q + GVL+LS FAGA ++ ++++NP+ + A A+ M
Sbjct: 384 STRDGMNLVAYEYIATQKKRHGVLVLSEFAGAAQSLNGSIIINPWNTEELAGAYQEAVTM 443
Query: 475 PRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506
++R L S+L + W SF++ +
Sbjct: 444 SDEQRALNFSKLDKYVNKYTSAFWGQSFVTEL 475
|
Aspergillus niger (taxid: 5061) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 239 bits (609), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 288/591 (48%), Gaps = 81/591 (13%)
Query: 102 GVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNG 161
G+T + W+GW G+ +V E + N A T L + IPV ++ F+ YYNG
Sbjct: 48 GITSQFDTKWVGWPGV------DVHDEIEKN--ALTESLAEMKCIPVFLN-GVFDQYYNG 98
Query: 162 CCNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPV 221
CNG WP+ H M +T +T+ + + L +I + + +
Sbjct: 99 YCNGILWPILHHMGLPQEDQHDTNQTFETQYDAYKKANRMFLDVIIDNYEEG------DI 152
Query: 222 VWIHDYQLLVAATTIRQ----------------------------------VAYDFVGFH 247
VW HDY L+ +++ +A D +GFH
Sbjct: 153 VWCHDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSSEVYKTLPSRSELLRAILAADLLGFH 212
Query: 248 IEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAPENLK 307
D+ +F+ C R LG V+ + V GR V PIGI +RF++ + PE +
Sbjct: 213 TYDFARHFLSTCTRILG--VEGTHEGVVYQGRVTRVAVFPIGIDPDRFIRTCK-LPEVTQ 269
Query: 308 DEN--------LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359
N KVILGVDRLD KG+ + AFE+ LE++P + +KV +QI+VP+R D
Sbjct: 270 QMNELQEKFAGKKVILGVDRLDMIKGIPQKYLAFEKFLEENPYWRDKVVLVQIAVPTRND 329
Query: 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDG 419
V EY+ LK ++ LVGRINGRF + PI ++ + L A+Y + + LVT LRDG
Sbjct: 330 VPEYRKLKSQVHGLVGRINGRFGSVSSLPIHHLDCSVDFNYLCAIYAIADVMLVTSLRDG 389
Query: 420 MNLVAKEYVACQIREPGVLILSPFAGAGGMMH-EALLVNPYEIDAAANVLHRALCMPRDE 478
MNLV+ E+VACQ + GVL+LS FAGAG + AL+VNP+++ ++ + AL MP +E
Sbjct: 390 MNLVSYEFVACQEAKKGVLVLSEFAGAGQSLGVGALIVNPWDVTEVSSAIKEALNMPAEE 449
Query: 479 RELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQLTLDDFDLYLNNYV 538
RE R W F+S + + + + + + + L L + D+ + Y
Sbjct: 450 RETRHRSNFQYVCTHSAEKWGLDFMSELNGIIPESE---MQMRKIPLQLPEQDV-IQQYS 505
Query: 539 DGNCKLSLILDYDGTLT-PL---TSHPDLAVMSEETKRVLERLANMPDVNIGII--SGRT 592
N +L +IL + GTL P+ T DL ++ E K L+ L N P + ++ SG+
Sbjct: 506 QSNNRL-IILGFFGTLAEPMNSGTKEMDLK-LNPELKGTLKALCNDPKTTVVVLSRSGKN 563
Query: 593 LENLRH-HPDLAVMSE----ETKRVLERLANMP-DVNIGIISGRTLENLMK 637
+ N ++ + +E E + E + NMP +VN+ + G ++N+ K
Sbjct: 564 ILNKNFGESNIWLAAENGMFEKQTTGEWVTNMPQNVNLDWVDG--VKNVFK 612
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O59921|TPS1_EMENI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tpsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 239 bits (609), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 222/452 (49%), Gaps = 68/452 (15%)
Query: 100 MNGVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYY 159
++G++ T W GW GL P+E IP + + IPV +D + + +Y
Sbjct: 46 LSGLSKTTTFQWYGWPGLE--VPEEEIPTLKNRLKEEYNA------IPVFIDDELADRHY 97
Query: 160 NGCCNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVV 219
NG N WPLFH P F+ W+ Y + N FA A+ + ++D D
Sbjct: 98 NGFSNSILWPLFHYHPGEITFDESAWEAYKEANRLFAQ----AVASQVQDGD-------- 145
Query: 220 PVVWIHDYQLLVAATTIRQ----------VAY---------------------------- 241
++W+HDY L++ +R+ + +
Sbjct: 146 -LIWVHDYHLMLLPEMLREEIGNTKKNIKIGFFLHTPFPSSEIYRILPVRNELLLGLLHC 204
Query: 242 DFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAEN 301
D +GFH DY +F+ C R LG N +E G+ + A PIGI E+F + +
Sbjct: 205 DLIGFHTYDYTRHFLSACSRLLGLPTTPNG--IEFQGKIIACGAFPIGIDPEKFKEGLKK 262
Query: 302 -------APENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354
A K + +K+++GVDRLDY KG+ ++ A E L HPE+V KV +Q++V
Sbjct: 263 EKVQKRIATLEQKFQGVKLMVGVDRLDYIKGVPQKLHALEVFLSDHPEWVGKVVLVQVAV 322
Query: 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVT 414
PSR DV EY+ L+ +++LVGRING+F + PI ++ + +EL ALY S +V+
Sbjct: 323 PSRQDVEEYQNLRAVVNELVGRINGKFGTVEFMPIHFLHKSVNFDELIALYAVSDACVVS 382
Query: 415 PLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCM 474
RDGMNLV+ EY+A Q + G L+LS FAGA ++ +++VNP+ + A H A+ M
Sbjct: 383 STRDGMNLVSYEYIATQEKRHGSLVLSEFAGAAQSLNGSIIVNPWNTEELAAAYHEAVTM 442
Query: 475 PRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506
++R L S+L + W SF++ +
Sbjct: 443 SDEQRALNFSKLDKYVNKYTSAFWGQSFVTEL 474
|
Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|A4WBR1|OTSA_ENT38 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Enterobacter sp. (strain 638) GN=otsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 235 bits (600), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 150/440 (34%), Positives = 227/440 (51%), Gaps = 67/440 (15%)
Query: 109 GIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFW 168
G+W GWSG EV E P + +T + ++ + + E YY+ N W
Sbjct: 37 GLWFGWSG-------EVGNEDKPLQKVTRGNITWASF---NLSEQDHEEYYSQFSNAVLW 86
Query: 169 PLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQ 228
P FH D F ++W+ Y +VN A+ L +I++ D ++WIHDY
Sbjct: 87 PAFHYRLDLVKFQRDSWEGYTRVNALLADKLL----PLIEEDD---------ILWIHDYH 133
Query: 229 LLVAATTIRQVA----------------------------------YDFVGFHIEDYCLN 254
LL A+ +R+ YD +GF E+
Sbjct: 134 LLPFASELRKRGVNNRIGFFLHIPFPTPEIFTAIPPHEELLEGLCDYDLLGFQTENDRQA 193
Query: 255 FIDCCCRRLGSRVDRNNMLVELA-GRTVHVKALPIGI-PFERFVQLAENAP---ENLKDE 309
F++ + +R+ +N A G+T + PIGI P E + P LK+E
Sbjct: 194 FLESVAGK--TRLTTHNGKSHQAWGKTFDTEVYPIGIEPDEIAADASGPLPPKLAQLKNE 251
Query: 310 --NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALK 367
N+K I V+RLDY+KGL R +A+ERLLEK+P++ K+ + QI+ SR +V Y+ ++
Sbjct: 252 LKNVKNIFSVERLDYSKGLPERFQAYERLLEKYPQHHGKIRYTQIAPTSRGEVQAYQDIR 311
Query: 368 DEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEY 427
+++ GRINGR+ + W+P+ Y+ ++ L ++R + + LVTPLRDGMNLVAKEY
Sbjct: 312 HQLETEAGRINGRYGQLGWTPLYYLNQHFERKVLMKVFRYAEVGLVTPLRDGMNLVAKEY 371
Query: 428 VACQ-IREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMSQL 486
VA Q ++PGVL+LS FAGA + ALLVNPY+ D AN L RAL MP ER R +++
Sbjct: 372 VAAQDPKDPGVLVLSQFAGAANELTSALLVNPYDSDDVANALDRALKMPLTERISRHAEM 431
Query: 487 RHREQQLDVNHWMNSFLSSM 506
++ D+NHW +F+ +
Sbjct: 432 MKVIRENDINHWQETFIRDL 451
|
Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor. Enterobacter sp. (strain 638) (taxid: 399742) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00764|TPS1_YEAST Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPS1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 233 bits (595), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 144/453 (31%), Positives = 218/453 (48%), Gaps = 69/453 (15%)
Query: 100 MNGVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYY 159
+ G+ T W GW GL IP+ D DQ L +P+ + + + +Y
Sbjct: 51 LEGLKKTYTFKWFGWPGLE-------IPD-DEKDQVRKDLLEKFNAVPIFLSDEIADLHY 102
Query: 160 NGCCNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVV 219
NG N WPLFH P F+ W Y + N+ F N + A N
Sbjct: 103 NGFSNSILWPLFHYHPGEINFDENAWLAYNEANQTFTN-------------EIAKTMNHN 149
Query: 220 PVVWIHDYQLLVAATTIR-----------QVAY--------------------------- 241
++W+HDY L++ +R +V +
Sbjct: 150 DLIWVHDYHLMLVPEMLRVKIHEKQLQNVKVGWFLHTPFPSSEIYRILPVRQEILKGVLS 209
Query: 242 -DFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFV---- 296
D VGFH DY +F+ R L N VE GR V+V A PIGI ++F
Sbjct: 210 CDLVGFHTYDYARHFLSSVQRVLNVNTLPNG--VEYQGRFVNVGAFPIGIDVDKFTDGLK 267
Query: 297 -QLAENAPENLKD--ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQIS 353
+ + + LK+ + K+I+GVDRLDY KG+ ++ A E L +HPE+ KV +Q++
Sbjct: 268 KESVQKRIQQLKETFKGCKIIVGVDRLDYIKGVPQKLHAMEVFLNEHPEWRGKVVLVQVA 327
Query: 354 VPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALV 413
VPSR DV EY+ L+ +++LVGRING+F + PI ++ I EEL +LY S + LV
Sbjct: 328 VPSRGDVEEYQYLRSVVNELVGRINGQFGTVEFVPIHFMHKSIPFEELISLYAVSDVCLV 387
Query: 414 TPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALC 473
+ RDGMNLV+ EY+ACQ + G LILS F GA ++ A++VNP+ D ++ ++ AL
Sbjct: 388 SSTRDGMNLVSYEYIACQEEKKGSLILSEFTGAAQSLNGAIIVNPWNTDDLSDAINEALT 447
Query: 474 MPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506
+P ++E+ +L + W +F+ +
Sbjct: 448 LPDVKKEVNWEKLYKYISKYTSAFWGENFVHEL 480
|
Synthase catalytic subunit of the trehalose synthase complex that catalyzes the production of trehalose from glucose-6-phosphate and UDP-glucose in a two step process. Can function independently of the complex. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 808 | ||||||
| 328712494 | 836 | PREDICTED: alpha,alpha-trehalose-phospha | 0.813 | 0.785 | 0.658 | 0.0 | |
| 193657175 | 856 | PREDICTED: alpha,alpha-trehalose-phospha | 0.813 | 0.767 | 0.658 | 0.0 | |
| 307206697 | 861 | Alpha,alpha-trehalose-phosphate synthase | 0.886 | 0.831 | 0.548 | 0.0 | |
| 383853810 | 790 | PREDICTED: alpha,alpha-trehalose-phospha | 0.805 | 0.824 | 0.571 | 0.0 | |
| 156547621 | 798 | PREDICTED: alpha,alpha-trehalose-phospha | 0.805 | 0.815 | 0.571 | 0.0 | |
| 400130722 | 824 | trehalose-6-phosphate synthase [Ctenocep | 0.809 | 0.793 | 0.552 | 0.0 | |
| 350414398 | 803 | PREDICTED: alpha,alpha-trehalose-phospha | 0.805 | 0.810 | 0.568 | 0.0 | |
| 340715203 | 803 | PREDICTED: alpha,alpha-trehalose-phospha | 0.805 | 0.810 | 0.567 | 0.0 | |
| 332023433 | 793 | Alpha,alpha-trehalose-phosphate synthase | 0.805 | 0.820 | 0.566 | 0.0 | |
| 328776871 | 764 | PREDICTED: alpha,alpha-trehalose-phospha | 0.805 | 0.852 | 0.567 | 0.0 |
| >gi|328712494|ref|XP_003244824.1| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] A-like isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/744 (65%), Positives = 559/744 (75%), Gaps = 87/744 (11%)
Query: 103 VTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGC 162
V +E G WIGWSG +DL P++ IPE+DP D+APT+GL SSQ+IPVH+DK E E +YNGC
Sbjct: 56 VVVECKGTWIGWSGSFDLKPNDPIPESDPEDKAPTAGLKSSQIIPVHLDKTEIEEFYNGC 115
Query: 163 CNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVV 222
CNGTFWPLFHSMPDRA F + WKTYCKVN++FA+CTL+ALR+ IK LD AG P+V
Sbjct: 116 CNGTFWPLFHSMPDRANFVSRDWKTYCKVNDKFADCTLDALRDAIKSLDDAGDHQTAPLV 175
Query: 223 WIHDYQLLVAATTIRQV--------------------------------------AYDFV 244
WIHDYQLL AT IRQV AYDF
Sbjct: 176 WIHDYQLLTTATKIRQVCEAENLRCKLGFFLHIPFPSWDIMRLLPWDDQVLQGMLAYDFT 235
Query: 245 GFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAPE 304
FHIEDYCLNFIDCCCRRLG RVDR NMLVELAGRT+ VKALPIGIPF+RFVQL+E AP
Sbjct: 236 AFHIEDYCLNFIDCCCRRLGCRVDRTNMLVELAGRTIQVKALPIGIPFDRFVQLSEKAPA 295
Query: 305 NLK-DENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEY 363
L E++KVILGVDRLDYTKGLVHRI AFE+ L+K+PE+ EKV LQISVPSRTDV EY
Sbjct: 296 FLNMSEDVKVILGVDRLDYTKGLVHRILAFEKFLDKYPEHREKVVLLQISVPSRTDVKEY 355
Query: 364 KALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLV 423
K LKDE + L+GRINGRFS PNWSPIRYI+GC+ QE+LAALYRD A+ALVTPLRDGMNLV
Sbjct: 356 KQLKDETELLIGRINGRFSMPNWSPIRYIYGCLSQEQLAALYRDCAVALVTPLRDGMNLV 415
Query: 424 AKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRM 483
AKE+VACQIR PGVLILSPFAGAGG MHEALLVNPYE+D ANVLHRAL MP DERELRM
Sbjct: 416 AKEFVACQIRTPGVLILSPFAGAGGTMHEALLVNPYELDEMANVLHRALRMPLDERELRM 475
Query: 484 SQLRHREQQLDVNHWMNSFLSSMGAL-DNDDDSDP--------LSAKTLQLTLDDFDLYL 534
+QLRHREQ LDVN+WM SF SSMGAL D DSD L K++QL LDDFD+YL
Sbjct: 476 TQLRHREQLLDVNYWMTSFFSSMGALSDGGGDSDANGGISGCNLPPKSMQLQLDDFDMYL 535
Query: 535 NNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLE 594
+N++ G KLSLILDYDGTLT LTSHPDLAVMSEET +VL+RL+ MPDVNI IISGRTL+
Sbjct: 536 SNHIAGAGKLSLILDYDGTLTHLTSHPDLAVMSEETVKVLQRLSRMPDVNIAIISGRTLD 595
Query: 595 NLRHHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEI 654
N++ MV IE VTYAGSHG+EI
Sbjct: 596 NVK---------------------------------------SMVGIENVTYAGSHGIEI 616
Query: 655 LHPDGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETPIERREYI 714
LHPDGT FVHPVP++Y +K+ +L K L DEVC DGAW+ENKGV+LT+HYRE P+ RE++
Sbjct: 617 LHPDGTNFVHPVPRQYEQKVAELQKVLADEVCGDGAWVENKGVMLTYHYREVPVALREHL 676
Query: 715 IDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAGNE 774
RA +IF AGFEPH +AIE KPPV WDQGRASI+ILRT YGVDWSERVR++YAGNE
Sbjct: 677 ERRAVEIFEAAGFEPHRGFLAIEGKPPVTWDQGRASIYILRTTYGVDWSERVRVVYAGNE 736
Query: 775 DAMLALQGIACTFRVDSSPTVKSS 798
DAML+LQGIACTFRVD SP V+++
Sbjct: 737 DAMLSLQGIACTFRVDPSPMVQTA 760
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|193657175|ref|XP_001943616.1| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] A-like isoform 1 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/744 (65%), Positives = 559/744 (75%), Gaps = 87/744 (11%)
Query: 103 VTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGC 162
V +E G WIGWSG +DL P++ IPE+DP D+APT+GL SSQ+IPVH+DK E E +YNGC
Sbjct: 76 VVVECKGTWIGWSGSFDLKPNDPIPESDPEDKAPTAGLKSSQIIPVHLDKTEIEEFYNGC 135
Query: 163 CNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVV 222
CNGTFWPLFHSMPDRA F + WKTYCKVN++FA+CTL+ALR+ IK LD AG P+V
Sbjct: 136 CNGTFWPLFHSMPDRANFVSRDWKTYCKVNDKFADCTLDALRDAIKSLDDAGDHQTAPLV 195
Query: 223 WIHDYQLLVAATTIRQV--------------------------------------AYDFV 244
WIHDYQLL AT IRQV AYDF
Sbjct: 196 WIHDYQLLTTATKIRQVCEAENLRCKLGFFLHIPFPSWDIMRLLPWDDQVLQGMLAYDFT 255
Query: 245 GFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAPE 304
FHIEDYCLNFIDCCCRRLG RVDR NMLVELAGRT+ VKALPIGIPF+RFVQL+E AP
Sbjct: 256 AFHIEDYCLNFIDCCCRRLGCRVDRTNMLVELAGRTIQVKALPIGIPFDRFVQLSEKAPA 315
Query: 305 NLK-DENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEY 363
L E++KVILGVDRLDYTKGLVHRI AFE+ L+K+PE+ EKV LQISVPSRTDV EY
Sbjct: 316 FLNMSEDVKVILGVDRLDYTKGLVHRILAFEKFLDKYPEHREKVVLLQISVPSRTDVKEY 375
Query: 364 KALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLV 423
K LKDE + L+GRINGRFS PNWSPIRYI+GC+ QE+LAALYRD A+ALVTPLRDGMNLV
Sbjct: 376 KQLKDETELLIGRINGRFSMPNWSPIRYIYGCLSQEQLAALYRDCAVALVTPLRDGMNLV 435
Query: 424 AKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRM 483
AKE+VACQIR PGVLILSPFAGAGG MHEALLVNPYE+D ANVLHRAL MP DERELRM
Sbjct: 436 AKEFVACQIRTPGVLILSPFAGAGGTMHEALLVNPYELDEMANVLHRALRMPLDERELRM 495
Query: 484 SQLRHREQQLDVNHWMNSFLSSMGAL-DNDDDSDP--------LSAKTLQLTLDDFDLYL 534
+QLRHREQ LDVN+WM SF SSMGAL D DSD L K++QL LDDFD+YL
Sbjct: 496 TQLRHREQLLDVNYWMTSFFSSMGALSDGGGDSDANGGISGCNLPPKSMQLQLDDFDMYL 555
Query: 535 NNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLE 594
+N++ G KLSLILDYDGTLT LTSHPDLAVMSEET +VL+RL+ MPDVNI IISGRTL+
Sbjct: 556 SNHIAGAGKLSLILDYDGTLTHLTSHPDLAVMSEETVKVLQRLSRMPDVNIAIISGRTLD 615
Query: 595 NLRHHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEI 654
N++ MV IE VTYAGSHG+EI
Sbjct: 616 NVK---------------------------------------SMVGIENVTYAGSHGIEI 636
Query: 655 LHPDGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETPIERREYI 714
LHPDGT FVHPVP++Y +K+ +L K L DEVC DGAW+ENKGV+LT+HYRE P+ RE++
Sbjct: 637 LHPDGTNFVHPVPRQYEQKVAELQKVLADEVCGDGAWVENKGVMLTYHYREVPVALREHL 696
Query: 715 IDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAGNE 774
RA +IF AGFEPH +AIE KPPV WDQGRASI+ILRT YGVDWSERVR++YAGNE
Sbjct: 697 ERRAVEIFEAAGFEPHRGFLAIEGKPPVTWDQGRASIYILRTTYGVDWSERVRVVYAGNE 756
Query: 775 DAMLALQGIACTFRVDSSPTVKSS 798
DAML+LQGIACTFRVD SP V+++
Sbjct: 757 DAMLSLQGIACTFRVDPSPMVQTA 780
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|307206697|gb|EFN84652.1| Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/842 (54%), Positives = 578/842 (68%), Gaps = 126/842 (14%)
Query: 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDK 60
AGGLVTAVAPVVI+ G+W+GW G++ P++ IPE+DPND+ PT+GL S +V+ VHVD
Sbjct: 40 AGGLVTAVAPVVINGNGVWVGWPGMHMDNPNDPIPESDPNDRTPTAGLLSRKVVAVHVDP 99
Query: 61 DEFEAYYNGCCNGTFWPLFHSMPDRAVFNAETWKVSHLKMNGVTLEITGIWIGWSGLYDL 120
F++YYNGCCNGTFWPLFHSMPDRA F AE W+ +S +
Sbjct: 100 GIFDSYYNGCCNGTFWPLFHSMPDRATFTAEHWR------------------AYSAV--- 138
Query: 121 APDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVF 180
N+Q V+ VHVD F++YYNGCCNGTFWPLFHSMPDRA F
Sbjct: 139 -----------NEQ-----FAEKTVVAVHVDPGIFDSYYNGCCNGTFWPLFHSMPDRATF 182
Query: 181 NAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA 240
AE W+ Y VNE+FA T+ AL + K+ ++N P+VW+HDY L++AA IRQ A
Sbjct: 183 TAEHWRAYSAVNEQFAEKTVGALEQIHKE--QVNQSNGTPLVWVHDYHLMLAANWIRQAA 240
Query: 241 --------------------------------------YDFVGFHIEDYCLNFIDCCCRR 262
D VGFHI+DYCLNF+DCC R
Sbjct: 241 DEKNLRLKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMVGFHIQDYCLNFVDCCQRS 300
Query: 263 LGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDY 322
LG RVDR N+LVE GRTV V+ LPIGIPF+RFV LAE A + ++ N K++LGVDRLDY
Sbjct: 301 LGCRVDRKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAETANKVMQ-SNQKIVLGVDRLDY 359
Query: 323 TKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFS 382
TKGLVHR+KAFE LLEKHP++ E+VT LQI+VPSRTDV EY+ LK EMDQL+G INGRF+
Sbjct: 360 TKGLVHRLKAFEMLLEKHPQHREQVTMLQIAVPSRTDVREYQDLKLEMDQLIGCINGRFT 419
Query: 383 KPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQI-REPGVLILS 441
PNWSPIRYI+GC+ Q+ELAA YRD+A+ALVTPLRDGMNLVAKE+VACQI + PGVLI+S
Sbjct: 420 TPNWSPIRYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVAKEFVACQINKPPGVLIVS 479
Query: 442 PFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNS 501
PFAGAG MMHEAL+ NPYEID AA V+HRAL MP DER LRM+ LR RE+ DVN+WM S
Sbjct: 480 PFAGAGEMMHEALICNPYEIDEAAEVIHRALTMPEDERTLRMNHLRRRERIYDVNYWMKS 539
Query: 502 FLSSMGALDNDDDSDPLSAKTLQ-LTLDDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSH 560
FL MG+L ++ D + A T+Q +T+DDFD YL+ Y+ N KL+L+LDYDGTL P+ +H
Sbjct: 540 FLQVMGSL---EEHDSVGATTMQPVTMDDFDDYLSKYIGDNHKLALLLDYDGTLAPIATH 596
Query: 561 PDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMP 620
PDLA++ ETK VL+RL+NM DV I IISGR + N++
Sbjct: 597 PDLAILPLETKNVLQRLSNMSDVYIAIISGRNVNNVK----------------------- 633
Query: 621 DVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKA 680
MV IE +TYAG+HGLEILHPDG+KFVHP+P E +K+ L++
Sbjct: 634 ----------------SMVGIEGITYAGNHGLEILHPDGSKFVHPMPAELEDKVASLMQT 677
Query: 681 LQDEVCHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKP 740
LQ+++C DGAW+ENKG LLTFHYRETP+E R ++D+A ++ + GF+ A AIEAKP
Sbjct: 678 LQEQLCRDGAWVENKGALLTFHYRETPMEGRPKMVDQAKKLIEDGGFKACTAHCAIEAKP 737
Query: 741 PVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVK 796
PV+W++GRASI+ILRT +G+DWSER+RIIYAG +EDAM AL+G+A TFRV SS ++
Sbjct: 738 PVEWNKGRASIYILRTAFGLDWSERIRIIYAGDDVTDEDAMKALKGMAATFRVASSHIIR 797
Query: 797 SS 798
+S
Sbjct: 798 TS 799
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|383853810|ref|XP_003702415.1| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] A-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/740 (57%), Positives = 527/740 (71%), Gaps = 89/740 (12%)
Query: 103 VTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGC 162
V + G+W+GW G++ PDE IPE+DPND+ PT+GL S +V+ VHV+ F++YYNGC
Sbjct: 37 VVISGNGVWVGWPGMHMENPDEPIPESDPNDRTPTAGLLSRKVVAVHVEPTVFDSYYNGC 96
Query: 163 CNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVV 222
CNGTFWPLFHSMPDRA F A+ W+ Y VNE+FA T+ AL + K+ A ++N P+V
Sbjct: 97 CNGTFWPLFHSMPDRATFIADHWRAYSSVNEKFAAKTVGALEQIHKE--QANQSNGTPLV 154
Query: 223 WIHDYQLLVAATTIRQVA--------------------------------------YDFV 244
WIHDY L++AA IRQ A D V
Sbjct: 155 WIHDYHLMLAANWIRQAADEKQLKLKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMV 214
Query: 245 GFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAPE 304
GFHI+DYCLNF+DCC R LG RVDR N+LVE GRTV V+ LPIGIPF+RFV LAE A
Sbjct: 215 GFHIQDYCLNFVDCCQRCLGCRVDRKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAETA-N 273
Query: 305 NLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYK 364
+ N K++LGVDRLDYTKGLVHR+KAFE LLEKHP++ E+VT LQI+VPSRTDV EY+
Sbjct: 274 KVMSTNQKIVLGVDRLDYTKGLVHRLKAFEMLLEKHPQHREQVTMLQIAVPSRTDVREYQ 333
Query: 365 ALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVA 424
LK EMDQL+GRINGRF+ PNWSPIRYI+GC+ Q+ELAA YRD+A+ALVTPLRDGMNLVA
Sbjct: 334 DLKLEMDQLIGRINGRFTTPNWSPIRYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVA 393
Query: 425 KEYVACQIRE-PGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRM 483
KE+VACQI PGVLI+SPFAGAG MMHEAL+ NPYEID AA V+HRAL MP DER LRM
Sbjct: 394 KEFVACQINTPPGVLIVSPFAGAGEMMHEALICNPYEIDEAAEVIHRALTMPEDERTLRM 453
Query: 484 SQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQ-LTLDDFDLYLNNYVDGNC 542
+ LR RE+ DVN+WM SFL MG+L ++ D + A T+Q +T+DDFD YL+ Y+ N
Sbjct: 454 NHLRRRERIYDVNYWMKSFLQVMGSL---EEHDSVGATTMQPVTMDDFDDYLSKYIGDNH 510
Query: 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDL 602
KL+L+LDYDGTL P+ +HPDLA++ ETK VL+RL+NM DV I IISGR + N++
Sbjct: 511 KLALLLDYDGTLAPIATHPDLAILPLETKNVLQRLSNMSDVYIAIISGRNVNNVK----- 565
Query: 603 AVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKF 662
MV IE +TYAG+HGLEILHPDG+KF
Sbjct: 566 ----------------------------------SMVGIEGITYAGNHGLEILHPDGSKF 591
Query: 663 VHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIF 722
VHP+P E EK+ L++ALQD++C DGAW+ENKG LLTFHYRETP++ R ++++A +I
Sbjct: 592 VHPMPAELEEKVANLMQALQDQLCRDGAWVENKGALLTFHYRETPVDARTQMVEQAKKII 651
Query: 723 LEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAML 778
+AGF+P A AIEAKPPV+W++GRASI+ILRT +G+DWSER+RIIYAG +EDAM
Sbjct: 652 ADAGFKPCPAHCAIEAKPPVEWNKGRASIYILRTAFGLDWSERIRIIYAGDDVTDEDAMK 711
Query: 779 ALQGIACTFRVDSSPTVKSS 798
AL+G+A TFRV SS +++S
Sbjct: 712 ALKGMAATFRVASSHIIRTS 731
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|156547621|ref|XP_001603693.1| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] A-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/740 (57%), Positives = 524/740 (70%), Gaps = 89/740 (12%)
Query: 103 VTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGC 162
V + G+W+GW G++ +E IPE+DPND+ PT+GL S +V+ VHV+ F++YYNGC
Sbjct: 49 VVINGNGVWVGWPGMHMENRNEPIPESDPNDRTPTAGLLSRKVVAVHVEPTIFDSYYNGC 108
Query: 163 CNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVV 222
CNGTFWPLFHSMPDRA F A+ WK Y VNEEFA T+ AL + K+ AG+ N P+V
Sbjct: 109 CNGTFWPLFHSMPDRATFIADHWKAYSAVNEEFAAKTVGALEQIHKE--QAGQGNGTPLV 166
Query: 223 WIHDYQLLVAATTIRQVA--------------------------------------YDFV 244
W+HDY L++AA IRQ A D V
Sbjct: 167 WVHDYHLMLAANWIRQAADEKNLKLKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMV 226
Query: 245 GFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAPE 304
GFHI+DYCLNF+DCC R LG RVDR N+LVE GRTV V+ LPIGIPF+RFV LAE AP+
Sbjct: 227 GFHIQDYCLNFVDCCQRSLGCRVDRKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAETAPK 286
Query: 305 NLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYK 364
+ N K+ILGVDRLDYTKGLVHR+KAFE LLEKHPE+ E+VT LQI+VPSRTDV EY+
Sbjct: 287 VML-TNQKIILGVDRLDYTKGLVHRLKAFEMLLEKHPEHREQVTMLQIAVPSRTDVREYQ 345
Query: 365 ALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVA 424
LK EMDQL+G INGRF+ PNWSPIRYI+GC+ Q+ELAA YRD+A+ALVTPLRDGMNLVA
Sbjct: 346 DLKLEMDQLIGSINGRFTTPNWSPIRYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVA 405
Query: 425 KEYVACQIRE-PGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRM 483
KE+VACQI PGVLI+SPFAGAG MMHEAL+ NPYEID AA V+HRAL MP DER LRM
Sbjct: 406 KEFVACQINTPPGVLIVSPFAGAGEMMHEALICNPYEIDEAAEVIHRALTMPEDERTLRM 465
Query: 484 SQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQ-LTLDDFDLYLNNYVDGNC 542
+ LR RE+ DVNHWM SFL MG+L ++ D + A +Q +T+DDFD YL+ Y+ N
Sbjct: 466 NHLRRREKAYDVNHWMKSFLQVMGSL---EERDSVGATVMQPVTMDDFDDYLSKYIGENH 522
Query: 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDL 602
KL+L+LDYDGTL P+ +HPDLA + ETK VL+RL+N+PDV I IISGR + N++
Sbjct: 523 KLALLLDYDGTLAPIATHPDLATLPLETKNVLQRLSNLPDVYIAIISGRNVNNVK----- 577
Query: 603 AVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKF 662
MV I +TYAG+HGLEILHPDG+KF
Sbjct: 578 ----------------------------------SMVGINGITYAGNHGLEILHPDGSKF 603
Query: 663 VHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIF 722
VHP+P + K+ L++ALQD++C DGAW+ENKG LLTFHYRETP+ERR +I+ A ++
Sbjct: 604 VHPMPAVFESKVASLMQALQDQLCKDGAWVENKGALLTFHYRETPMERRPSMIEHAKKLI 663
Query: 723 LEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAML 778
+AGF+ +A AIEAKPPV+W++GRASI+ILRT +G+DWSER+RIIYAG +EDAM
Sbjct: 664 EDAGFKACSAHCAIEAKPPVEWNKGRASIYILRTAFGLDWSERIRIIYAGDDATDEDAMK 723
Query: 779 ALQGIACTFRVDSSPTVKSS 798
AL+G+A TFRV SS +++S
Sbjct: 724 ALKGMAATFRVASSHIIRTS 743
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|400130722|gb|AFP67548.1| trehalose-6-phosphate synthase [Ctenocephalides felis] | Back alignment and taxonomy information |
|---|
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/755 (55%), Positives = 532/755 (70%), Gaps = 101/755 (13%)
Query: 103 VTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGC 162
V ++ G+W+GW G++ PDE IPE+DP+D+ PT+GL S +V+ VHVD+D F++YYNGC
Sbjct: 50 VVIKGRGVWVGWPGIHLDNPDEKIPESDPDDKTPTAGLLSKKVVAVHVDRDIFDSYYNGC 109
Query: 163 CNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNV---- 218
CNGTFWPLFHSMPDRA F A+ W +Y +VN+EFA T+ AL + ++ TN
Sbjct: 110 CNGTFWPLFHSMPDRATFCADHWVSYVRVNQEFAAKTVKALEILREETGNGVHTNGNGSE 169
Query: 219 -----------VPVVWIHDYQLLVAATTIRQVAY-------------------------- 241
P+VWIHDY L++AA +RQ A
Sbjct: 170 NGHTNGHSHGGAPLVWIHDYHLMLAANWLRQAAEENDLPCKLGFFLHIPFPPWDIFRLFP 229
Query: 242 ------------DFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIG 289
D +GFHI+DYCLNF+DCC R LG RVDR N+LVE GRTV ++ LPIG
Sbjct: 230 WSDEILQGMLGCDMIGFHIQDYCLNFVDCCQRNLGCRVDRKNLLVEHGGRTVRIRPLPIG 289
Query: 290 IPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTF 349
IPFERFV LAE AP L N +++LGVDRLDYTKGLV+R+KAFE L+EK+PE+ EKV
Sbjct: 290 IPFERFVTLAETAP-TLMQTNPRIVLGVDRLDYTKGLVNRLKAFEMLMEKYPEHQEKVVL 348
Query: 350 LQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSA 409
LQI+VPSRTDV EY+ LK+EMDQLVGRINGRF+ PNWSPIRYI+GC+GQ++LAA YRD+A
Sbjct: 349 LQIAVPSRTDVREYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCVGQDKLAAFYRDAA 408
Query: 410 IALVTPLRDGMNLVAKEYVACQIRE-PGVLILSPFAGAGGMMHEALLVNPYEIDAAANVL 468
+ALVTPLRDGMNLVAKE+VACQIR PGVL++SPFAGAG MMHEAL+ NPYEID AA V+
Sbjct: 409 VALVTPLRDGMNLVAKEFVACQIRRPPGVLVVSPFAGAGEMMHEALVCNPYEIDEAARVI 468
Query: 469 HRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQ-LTL 527
HRAL MP DER +RM+ LR RE+ DVNHWM SFL +M +L +++ D + A T+Q +T+
Sbjct: 469 HRALTMPEDERTMRMNHLRRREKVHDVNHWMRSFLKAMDSL--EEERDEVGATTMQPVTI 526
Query: 528 DDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGI 587
DDFD YL+ Y+ N KL+L+LDYDGTL P+ HPDLA + ETK V++RL+NMPDV + I
Sbjct: 527 DDFDDYLSKYIGANDKLALLLDYDGTLAPIAPHPDLATLPPETKHVIQRLSNMPDVYVAI 586
Query: 588 ISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYA 647
+SGR +EN++ +MV IE +TYA
Sbjct: 587 VSGRNVENVK---------------------------------------QMVGIEGITYA 607
Query: 648 GSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETP 707
G+HGLEILHPDG+ FVHP+P EY +K+ L+++LQ++VC DGAW+ENKG +LTFHYRETP
Sbjct: 608 GNHGLEILHPDGSMFVHPMPIEYEKKVSNLLQSLQEQVCRDGAWVENKGAMLTFHYRETP 667
Query: 708 IERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVR 767
+ R+ +I +A Q+ ++GF NA AIEAKPPV+W++GRASI+ILRT +GVDWSER++
Sbjct: 668 LYARQSMIQQARQLIEKSGFTAANAHCAIEAKPPVQWNKGRASIYILRTAFGVDWSERIK 727
Query: 768 IIYAG----NEDAMLALQGIACTFRVDSSPTVKSS 798
IIYAG +EDAM AL+G+A TFRV SS +K+S
Sbjct: 728 IIYAGDDVTDEDAMQALKGMAATFRVASSNIIKTS 762
|
Source: Ctenocephalides felis Species: Ctenocephalides felis Genus: Ctenocephalides Family: Pulicidae Order: Siphonaptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350414398|ref|XP_003490305.1| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] A-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/740 (56%), Positives = 526/740 (71%), Gaps = 89/740 (12%)
Query: 103 VTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGC 162
V + G+W+GW G++ P+E IPE+DPND+ PT+GL SS+V+ VH D F+AYYNGC
Sbjct: 50 VVISGNGVWVGWPGMHMENPNEPIPESDPNDRTPTAGLLSSKVMAVHFDPVIFDAYYNGC 109
Query: 163 CNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVV 222
CNGTFWPLFHSMPDRA F AE W+ Y VNEEFA T++AL + K+ + N P+V
Sbjct: 110 CNGTFWPLFHSMPDRATFIAEHWRAYSAVNEEFAVKTVSALEQIYKE--QKNQPNGTPLV 167
Query: 223 WIHDYQLLVAATTIRQVA--------------------------------------YDFV 244
W+HDY L++AA IRQ A D V
Sbjct: 168 WVHDYHLMLAANWIRQRADEKRLRCKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMV 227
Query: 245 GFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAPE 304
GFHI+DYCLNF+DCC R LG RVDR N+LVE GRTV V+ LPIGIPF+RFV LAE+A
Sbjct: 228 GFHIQDYCLNFVDCCQRSLGCRVDRKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAESA-N 286
Query: 305 NLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYK 364
+ N K++LGVDRLDYTKGLV+R+KAFE LLEKHPE+ E+VT LQI+VPSRTDV EY+
Sbjct: 287 KVMLTNQKIVLGVDRLDYTKGLVNRLKAFELLLEKHPEHREQVTMLQIAVPSRTDVREYQ 346
Query: 365 ALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVA 424
LK EMDQL+GRINGRF+ PNWSPIRYI+GC+ Q+ELAA YRD+A+ALVTPLRDGMNLVA
Sbjct: 347 DLKLEMDQLIGRINGRFTTPNWSPIRYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVA 406
Query: 425 KEYVACQIRE-PGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRM 483
KE+VACQI PGVLI+SPFAGAG MMHEAL+ NPYE+D AA V+HRAL MP DER LRM
Sbjct: 407 KEFVACQINTPPGVLIVSPFAGAGEMMHEALICNPYELDEAAEVIHRALTMPEDERTLRM 466
Query: 484 SQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQ-LTLDDFDLYLNNYVDGNC 542
+ LR RE+ DVN+WM SFL MG+L ++ D + A T+Q +T+DDFD YL+ Y+ N
Sbjct: 467 NHLRRRERINDVNYWMKSFLQVMGSL---EEHDSVGATTMQPVTMDDFDDYLSKYIGDNH 523
Query: 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDL 602
KL+L+LDYDGTL P+ +HPDLA++ ETK VL+RL+NM DV I IISGR + N++
Sbjct: 524 KLALLLDYDGTLAPIATHPDLAILPLETKNVLQRLSNMSDVYIAIISGRNVNNVK----- 578
Query: 603 AVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKF 662
MV IE +TYAG+HGLEILHPDG+KF
Sbjct: 579 ----------------------------------SMVGIEGITYAGNHGLEILHPDGSKF 604
Query: 663 VHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIF 722
VHP+P E +K+ L++ LQD++C DGAW+ENKG LLTFHYRETP+E R ++D+A +I
Sbjct: 605 VHPMPAELEDKVANLMQTLQDQLCKDGAWVENKGALLTFHYRETPMEGRSQMVDQAKKII 664
Query: 723 LEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAML 778
+AGF+ +A AIEA+PPV+W++GRASI+ILRT +G+DWSER+RIIYAG +EDAM
Sbjct: 665 EQAGFKACSAHCAIEARPPVEWNKGRASIYILRTAFGLDWSERIRIIYAGDDVTDEDAMK 724
Query: 779 ALQGIACTFRVDSSPTVKSS 798
AL+G+A TFRV SS +++S
Sbjct: 725 ALKGMAATFRVASSHIIRTS 744
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|340715203|ref|XP_003396108.1| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] A-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/740 (56%), Positives = 525/740 (70%), Gaps = 89/740 (12%)
Query: 103 VTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGC 162
V + G+W+GW G++ P+E IPE+DPND+ PT+GL S +V+ VH D F+AYYNGC
Sbjct: 50 VVISGNGVWVGWPGMHMENPNEPIPESDPNDRTPTAGLLSRKVMAVHFDPVIFDAYYNGC 109
Query: 163 CNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVV 222
CNGTFWPLFHSMPDRA F AE W+ Y VNEEFA T++AL + K+ + N P+V
Sbjct: 110 CNGTFWPLFHSMPDRATFIAEHWRAYSAVNEEFAVKTVSALEQIYKE--QKNQPNGTPLV 167
Query: 223 WIHDYQLLVAATTIRQVA--------------------------------------YDFV 244
W+HDY L++AA IRQ A D V
Sbjct: 168 WVHDYHLMLAANWIRQRADEKRLRCKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMV 227
Query: 245 GFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAPE 304
GFHI+DYCLNF+DCC R LG RVDR N+LVE GRTV V+ LPIGIPF+RFV LAE+A
Sbjct: 228 GFHIQDYCLNFVDCCQRSLGCRVDRKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAESA-N 286
Query: 305 NLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYK 364
+ N K++LGVDRLDYTKGLV+R+KAFE LLEKHPE+ E+VT LQI+VPSRTDV EY+
Sbjct: 287 KVMLTNQKIVLGVDRLDYTKGLVNRLKAFELLLEKHPEHREQVTMLQIAVPSRTDVREYQ 346
Query: 365 ALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVA 424
LK EMDQL+GRINGRF+ PNWSPIRYI+GC+ Q+ELAA YRD+A+ALVTPLRDGMNLVA
Sbjct: 347 DLKLEMDQLIGRINGRFTTPNWSPIRYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVA 406
Query: 425 KEYVACQIRE-PGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRM 483
KE+VACQI PGVLI+SPFAGAG MMHEAL+ NPYE+D AA V+HRAL MP DER LRM
Sbjct: 407 KEFVACQINTPPGVLIVSPFAGAGEMMHEALICNPYELDEAAEVIHRALTMPEDERTLRM 466
Query: 484 SQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQ-LTLDDFDLYLNNYVDGNC 542
+ LR RE+ DVN+WM SFL MG+L ++ D + A T+Q +T+DDFD YL+ Y+ N
Sbjct: 467 NHLRRRERINDVNYWMKSFLQVMGSL---EEHDSVGATTMQPVTMDDFDDYLSKYIGDNH 523
Query: 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDL 602
KL+L+LDYDGTL P+ +HPDLA++ ETK VL+RL+NM DV I IISGR + N++
Sbjct: 524 KLALLLDYDGTLAPIATHPDLAILPLETKNVLQRLSNMSDVYIAIISGRNVNNVK----- 578
Query: 603 AVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKF 662
MV IE +TYAG+HGLEILHPDG+KF
Sbjct: 579 ----------------------------------SMVGIEGITYAGNHGLEILHPDGSKF 604
Query: 663 VHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIF 722
VHP+P E +K+ L++ LQD++C DGAW+ENKG LLTFHYRETP+E R ++D+A +I
Sbjct: 605 VHPMPAELEDKVANLMQTLQDQLCKDGAWVENKGALLTFHYRETPMEGRSQMVDQAKKII 664
Query: 723 LEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAML 778
+AGF+ +A AIEA+PPV+W++GRASI+ILRT +G+DWSER+RIIYAG +EDAM
Sbjct: 665 EQAGFKACSAHCAIEARPPVEWNKGRASIYILRTAFGLDWSERIRIIYAGDDVTDEDAMK 724
Query: 779 ALQGIACTFRVDSSPTVKSS 798
AL+G+A TFRV SS +++S
Sbjct: 725 ALKGMAATFRVASSHIIRTS 744
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|332023433|gb|EGI63676.1| Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/740 (56%), Positives = 524/740 (70%), Gaps = 89/740 (12%)
Query: 103 VTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGC 162
V + G+W+GW G++ P+E IPE+DPND+ PT+GL S +V+ VHVD F++YYNGC
Sbjct: 37 VVINGNGVWVGWPGMHMENPNEPIPESDPNDRTPTAGLLSRKVVAVHVDAGIFDSYYNGC 96
Query: 163 CNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVV 222
CNGTFWPLFHSMPDRA F AE W+ Y VNE+FA T+ AL + K+ + + N P+V
Sbjct: 97 CNGTFWPLFHSMPDRATFIAEHWRAYSAVNEQFAAKTVGALEQIHKEQE--NQQNGTPLV 154
Query: 223 WIHDYQLLVAATTIRQVAY--------------------------------------DFV 244
W+HDY L++AA IRQ A D V
Sbjct: 155 WVHDYHLMLAANWIRQAAEEKNLRLKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMV 214
Query: 245 GFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAPE 304
GFHI+DYCLNF+DCC R LG RVDR N+LVE GRTV V+ LPIGIPF+RFV LAE A +
Sbjct: 215 GFHIQDYCLNFVDCCQRCLGCRVDRKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAETATK 274
Query: 305 NLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYK 364
++ N K++LGVDRLDYTKGLVHR+KAFE LLEKHPE+ E+VT LQI+VPSRTDV EY+
Sbjct: 275 VMQS-NQKIVLGVDRLDYTKGLVHRLKAFEMLLEKHPEHREQVTMLQIAVPSRTDVREYQ 333
Query: 365 ALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVA 424
LK EMDQL+G INGRF+ PNWSPIRYI+GC+ Q+ELAA YRD+A+ALVTPLRDGMNLVA
Sbjct: 334 DLKLEMDQLIGCINGRFTTPNWSPIRYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVA 393
Query: 425 KEYVACQIRE-PGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRM 483
KE+VACQI PGVLI+SPFAGAG MMHEAL+ NPYEID AA V+HRAL MP DER LRM
Sbjct: 394 KEFVACQINTPPGVLIVSPFAGAGEMMHEALICNPYEIDEAAEVIHRALTMPEDERTLRM 453
Query: 484 SQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQ-LTLDDFDLYLNNYVDGNC 542
+ LR RE+ DVN+WM SFL MG+L ++ D + A T+Q +T+DDFD YL+ Y+ N
Sbjct: 454 NHLRRRERIYDVNYWMKSFLQVMGSL---EEHDSVGATTMQPVTMDDFDDYLSKYIGDNH 510
Query: 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDL 602
KL+L+LDYDGTL P+ +HPDLA++ ETK VL+RL+NM DV I IISGR + N++
Sbjct: 511 KLALLLDYDGTLAPIATHPDLAILPLETKNVLQRLSNMSDVYIAIISGRNVINVK----- 565
Query: 603 AVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKF 662
MV IE +TYAG+HGLEILHPDG+KF
Sbjct: 566 ----------------------------------SMVGIEGITYAGNHGLEILHPDGSKF 591
Query: 663 VHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIF 722
VHP+P E +K+ L++ LQ+++C DGAW+ENKG LLTFHYRETP+E R ++D+A ++
Sbjct: 592 VHPMPAELEDKVASLMQTLQEQLCRDGAWVENKGALLTFHYRETPMESRPRMVDQAKRLI 651
Query: 723 LEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAML 778
AGF+ A AIEAKPPV+W++GRASI+ILRT +G+DWSER+RIIYAG +EDAM
Sbjct: 652 EGAGFKACTAHCAIEAKPPVEWNKGRASIYILRTAFGLDWSERIRIIYAGDDVTDEDAMK 711
Query: 779 ALQGIACTFRVDSSPTVKSS 798
AL+G+A TFRV SS +++S
Sbjct: 712 ALKGMAATFRVASSHIIRTS 731
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
| >gi|328776871|ref|XP_392397.3| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] A isoform 2 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/740 (56%), Positives = 522/740 (70%), Gaps = 89/740 (12%)
Query: 103 VTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGC 162
V + GIW+GW GL+ DE IPE+DPND+ PT+GL S +V+ VHV+ F++YYNGC
Sbjct: 15 VVISGNGIWVGWPGLHMENRDEPIPESDPNDRTPTAGLLSRKVVAVHVEPSIFDSYYNGC 74
Query: 163 CNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVV 222
CNGTFWPLFHSMPDRA F AE W+ Y VNEEFA T+ AL + K+ + N P+V
Sbjct: 75 CNGTFWPLFHSMPDRATFIAEHWRAYSAVNEEFAAKTVRALEEIHKE--QKNQPNGTPLV 132
Query: 223 WIHDYQLLVAATTIRQVA--------------------------------------YDFV 244
W+HDY L++AA IRQ A D V
Sbjct: 133 WVHDYHLMLAANWIRQAADEKQLKCKLGFFLHIPFPPWDIFRLFPWADEILQGMLGCDMV 192
Query: 245 GFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAPE 304
GFHI+DYCLNF+DCC R LG RVDR N+LVE GRTV V+ LPIGIPF+RFV LAE A
Sbjct: 193 GFHIQDYCLNFVDCCQRSLGCRVDRKNLLVEHGGRTVRVRPLPIGIPFDRFVSLAETA-N 251
Query: 305 NLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYK 364
+ N K++LGVDRLDYTKGLV+R+KAFE LLEKHPE+ E+VT LQI+VPSRTDV EY+
Sbjct: 252 KVISTNQKIVLGVDRLDYTKGLVNRLKAFEMLLEKHPEHREQVTMLQIAVPSRTDVREYQ 311
Query: 365 ALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVA 424
LK EMDQL+GRINGRF+ PNWSPIRYI+GC+ Q+ELAA YRD+A+ALVTPLRDGMNLVA
Sbjct: 312 DLKLEMDQLIGRINGRFTTPNWSPIRYIYGCVSQDELAAFYRDAAVALVTPLRDGMNLVA 371
Query: 425 KEYVACQIRE-PGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRM 483
KE+VACQI PGVLI+SPFAGAG MMHEAL+ NPYEID AA V+HRAL MP DER LRM
Sbjct: 372 KEFVACQINTPPGVLIVSPFAGAGEMMHEALICNPYEIDEAAEVIHRALTMPEDERTLRM 431
Query: 484 SQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQ-LTLDDFDLYLNNYVDGNC 542
+ LR RE+ DVN+WM SFL MG+L ++ D + A T+Q +T+DDFD YL+ Y+ N
Sbjct: 432 NHLRRRERIYDVNYWMKSFLQVMGSL---EEHDSVGATTMQPVTMDDFDDYLSKYIGDNH 488
Query: 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDL 602
KL+L+LDYDGTL P+ +HPDLA++ ETK VL+RL+NM DV I IISGR + N++
Sbjct: 489 KLALLLDYDGTLAPIATHPDLAILPLETKNVLQRLSNMSDVYIAIISGRNVNNVK----- 543
Query: 603 AVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKF 662
MV I+ +TYAG+HGLEILHPDG+KF
Sbjct: 544 ----------------------------------SMVGIDGITYAGNHGLEILHPDGSKF 569
Query: 663 VHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIF 722
VHP+P E K+ L++ALQD++C DGAW+ENKG LLTFHYRETP++ R ++++A +I
Sbjct: 570 VHPMPAELEGKVANLMQALQDQLCRDGAWVENKGALLTFHYRETPMDVRSTMVEQAKKII 629
Query: 723 LEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAML 778
+AGF+ +A AIEAKPPV+W++G ASI+ILRT +G+DWSER+RIIYAG +EDAM
Sbjct: 630 EQAGFKACSAHCAIEAKPPVEWNKGHASIYILRTAFGLDWSERIRIIYAGDDVTDEDAMK 689
Query: 779 ALQGIACTFRVDSSPTVKSS 798
AL+G+A TFRV SS +++S
Sbjct: 690 ALKGMAATFRVASSHIIRTS 709
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 808 | ||||||
| FB|FBgn0027560 | 809 | Tps1 "Trehalose-6-phosphate sy | 0.454 | 0.453 | 0.626 | 1.4e-229 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.425 | 0.469 | 0.375 | 1.3e-78 | |
| UNIPROTKB|G4NHF4 | 529 | MGG_03860 "Alpha,alpha-trehalo | 0.363 | 0.555 | 0.382 | 3.5e-62 | |
| POMBASE|SPAC328.03 | 513 | tps1 "alpha,alpha-trehalose-ph | 0.336 | 0.530 | 0.392 | 7.3e-61 | |
| TAIR|locus:2202990 | 942 | TPS1 "trehalose-6-phosphate sy | 0.428 | 0.367 | 0.389 | 4.6e-59 | |
| ASPGD|ASPL0000027021 | 504 | tpsA [Emericella nidulans (tax | 0.325 | 0.521 | 0.375 | 9.6e-59 | |
| CGD|CAL0004028 | 478 | TPS1 [Candida albicans (taxid: | 0.345 | 0.583 | 0.370 | 5e-58 | |
| UNIPROTKB|Q92410 | 478 | TPS1 "Alpha,alpha-trehalose-ph | 0.345 | 0.583 | 0.370 | 5e-58 | |
| SGD|S000000330 | 495 | TPS1 "Synthase subunit of treh | 0.355 | 0.579 | 0.365 | 1.1e-57 | |
| UNIPROTKB|P31677 | 474 | otsA [Escherichia coli K-12 (t | 0.335 | 0.571 | 0.407 | 1.3e-56 |
| FB|FBgn0027560 Tps1 "Trehalose-6-phosphate synthase 1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1216 (433.1 bits), Expect = 1.4e-229, Sum P(3) = 1.4e-229
Identities = 235/375 (62%), Positives = 294/375 (78%)
Query: 227 YQLLVAATTIRQ--VAYDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVK 284
++LL + I Q + D VGFHI+DYCLNF+DCC R LG RVDRNN+LVE GRTV V+
Sbjct: 214 FRLLPWSDEILQGMLGCDLVGFHIQDYCLNFVDCCQRNLGCRVDRNNLLVEHGGRTVRVR 273
Query: 285 ALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYV 344
LPIGIP+ERFV LA AP+ LK +++ILGVDRLDYTKGLVHR+ AFE LL K+P++
Sbjct: 274 PLPIGIPYERFVNLATTAPKVLKTSKMQIILGVDRLDYTKGLVHRLMAFEALLLKYPQHK 333
Query: 345 EKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAAL 404
EKV+ LQISVPSRTDV EY+ LK+E+DQLVGRINGRF+ NW+PIRYI+ + Q+ELAAL
Sbjct: 334 EKVSLLQISVPSRTDVKEYRELKEEVDQLVGRINGRFTTANWAPIRYIYDYVSQDELAAL 393
Query: 405 YRDSAIALVTPLRDGMNLVAKEYVACQIRE-PGVLILSPFAGAGGMMHEALLVNPYEIDA 463
YRD+A+ LVTPLRDGMNLVAKE+VACQI E PGVL++SPFAGAG MMHEALL NPYE++
Sbjct: 394 YRDAAVCLVTPLRDGMNLVAKEFVACQINEVPGVLVISPFAGAGEMMHEALLCNPYEVNE 453
Query: 464 AANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTL 523
AA V+HRAL MP DER LRM++LR RE + DV+HWM FL ++GAL+ DD + +
Sbjct: 454 AAEVIHRALTMPEDERVLRMARLRRREAECDVSHWMRCFLKAVGALEMDD----VGTTIM 509
Query: 524 Q-LTLDDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPD 582
Q +++DDFD YL Y+ N KL+L+LDYDGTL P+ HPDLA +S E K VL +L+N D
Sbjct: 510 QPVSVDDFDDYLLKYIGYNHKLALLLDYDGTLAPIAPHPDLATLSPEIKNVLYKLSNHSD 569
Query: 583 VNIGIISGRTLENLR 597
V + +ISGR ++N++
Sbjct: 570 VYVAVISGRNVDNVK 584
|
|
| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 607 (218.7 bits), Expect = 1.3e-78, Sum P(3) = 1.3e-78
Identities = 135/360 (37%), Positives = 203/360 (56%)
Query: 244 VGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQL----- 298
+GFH DY +F+ C R +G N V R V V P+GI ++F +
Sbjct: 205 IGFHTYDYARHFLKSCTRIVGLETAPNG--VYFKDRFVQVGVFPVGIDPDKFFESLKTTQ 262
Query: 299 AENAPENLKD--ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS 356
+N + LK+ E KV++G+DRLDY KG+ +++A ERL +K+PE+ K+ +Q++VPS
Sbjct: 263 VQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIERLFQKYPEWKGKLVLIQVAVPS 322
Query: 357 RTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL 416
R DV EY+ LK E+++LVGRING + +SPI Y+F + EL ALY S AL+T +
Sbjct: 323 RQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSVDPSELTALYNISDAALITSI 382
Query: 417 RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPR 476
RDGMNLVA+EY+ CQ GVLILS F GA + A+++NP+ + A+ +H +L MP
Sbjct: 383 RDGMNLVAQEYIVCQTENNGVLILSEFTGAAQSLSGAVMINPWNTEEVADSIHNSLLMPP 442
Query: 477 DERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQLTLDDFDLYLNN 536
+ERE + L + +HW F+ + ++ D T+Q D + ++
Sbjct: 443 EEREEKHQMLLKYVTKHTASHWGLGFVKELNKASSNTDK----MVTIQKL--DIEKVVDI 496
Query: 537 YVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENL 596
Y +L LI YDGTL P + P L+ S+E + L+N P ++ I+SGR + L
Sbjct: 497 YKQSKRRL-LIFAYDGTLIPYNNVPQLSRPSQELLNSFDILSNDPKTDVYILSGRDKKTL 555
|
|
| UNIPROTKB|G4NHF4 MGG_03860 "Alpha,alpha-trehalose-phosphate synthase 1" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 504 (182.5 bits), Expect = 3.5e-62, Sum P(2) = 3.5e-62
Identities = 117/306 (38%), Positives = 177/306 (57%)
Query: 227 YQLL-VAATTIRQVAY-DFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVK 284
Y++L V ++ V + D +GFH DY +F+ C R L + N V+ AGR V V
Sbjct: 190 YRILPVRQALLQGVLHCDLLGFHTYDYARHFLSSCSRILSAPTTPNG--VQFAGRFVTVG 247
Query: 285 ALPIGIPFERFVQLAEN-------APENLKDENLKVILGVDRLDYTKGLVHRIKAFERLL 337
A PIGI E+FV+ + A K E +K+I+GVDRLDY KG+ ++ A E L
Sbjct: 248 AFPIGIDPEKFVEGLQKPKVQQRIAALTRKFEGVKLIVGVDRLDYIKGVPQKLHALEVFL 307
Query: 338 EKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIG 397
+HPE++ K+ +Q++VPSR DV EY+ L+ +++LVGRING+F + PI ++ +
Sbjct: 308 TEHPEWIGKIVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTIEFMPIHFLHQSVS 367
Query: 398 QEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVN 457
+ELAALY S + LV+ RDGMNLV+ EY+A Q GV+ILS F GA + +L+VN
Sbjct: 368 FDELAALYAVSDVCLVSSTRDGMNLVSYEYIATQRDRHGVMILSEFTGAAQSLSGSLIVN 427
Query: 458 PYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDND-DDSD 516
P+ + AN +H A+ M ++RE +L + W +SF++ + L + +D
Sbjct: 428 PWNTEELANAIHDAVTMGPEQREANFKKLERYVFKYTSAWWGSSFVAELNRLAAGIEGAD 487
Query: 517 PLSAKT 522
+KT
Sbjct: 488 AEGSKT 493
|
|
| POMBASE|SPAC328.03 tps1 "alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 499 (180.7 bits), Expect = 7.3e-61, Sum P(2) = 7.3e-61
Identities = 112/285 (39%), Positives = 162/285 (56%)
Query: 242 DFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAEN 301
D VGFH DY +F+ C R L N VE G+ V V PIGI E+F ++
Sbjct: 212 DLVGFHTYDYARHFLSACSRILNLSTLPNG--VEYNGQMVSVGTFPIGIDPEKFSDALKS 269
Query: 302 APENLKD---------ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQI 352
+ +KD + +KVI+GVDRLDY KG+ + AFE LE++PE+V KV +Q+
Sbjct: 270 --DVVKDRIASIERRLQGVKVIVGVDRLDYIKGVPQKFHAFEVFLEQYPEWVGKVVLVQV 327
Query: 353 SVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIAL 412
+VPSR DV EY+ L+ +++LVGRINGRF ++PI ++ + EEL ALY S + L
Sbjct: 328 AVPSRQDVEEYQNLRAVVNELVGRINGRFGTVEYTPIHFLHKSVRFEELVALYNVSDVCL 387
Query: 413 VTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRAL 472
+T RDGMNLV+ EY+ Q G LILS FAGA ++ ++++NP+ + AN +H AL
Sbjct: 388 ITSTRDGMNLVSYEYICTQQERHGALILSEFAGAAQSLNGSIVINPWNTEELANSIHDAL 447
Query: 473 CMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDP 517
MP +RE ++L + W SF+ + + + P
Sbjct: 448 TMPEKQREANENKLFRYVNKYTSQFWGQSFVGELQRIQHYSHPHP 492
|
|
| TAIR|locus:2202990 TPS1 "trehalose-6-phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 518 (187.4 bits), Expect = 4.6e-59, Sum P(4) = 4.6e-59
Identities = 146/375 (38%), Positives = 202/375 (53%)
Query: 236 IRQV-AYDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFER 294
+R V A D VGFH DY +F+ C R LG ++ VE GR V A PIGI +R
Sbjct: 280 LRSVLAADLVGFHTYDYARHFVSACTRILG--LEGTPEGVEDQGRLTRVAAFPIGIDSDR 337
Query: 295 FVQLAENAPE------NLKDE--NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEK 346
F++ E PE LK+ KV+LGVDRLD KG+ +I AFE+ LE++ + +K
Sbjct: 338 FIRALE-VPEVIQHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDK 396
Query: 347 VTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYR 406
V LQI+VP+RTDV EY+ L ++ ++VGRINGRF PI ++ + L ALY
Sbjct: 397 VVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYA 456
Query: 407 DSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHE-ALLVNPYEIDAAA 465
+ +ALVT LRDGMNLV+ E+VACQ + GVLILS FAGA + A+LVNP+ I A
Sbjct: 457 VTDVALVTSLRDGMNLVSYEFVACQEAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVA 516
Query: 466 NVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQL 525
+ +AL M +ERE R H + W +F+S + D ++ L +
Sbjct: 517 ASIGQALNMTAEEREKRHRHNFHHVKTHTAQEWAETFVSELN--DTVIEAQ-LRISKVPP 573
Query: 526 TLDDFDLYLNNYVDGNCKLSLILDYDGTLT-PLTSHP---------DLAVMSEETKRVLE 575
L D + Y N +L LIL ++ TLT P+ + DL + E K L+
Sbjct: 574 ELPQHDA-IQRYSKSNNRL-LILGFNATLTEPVDNQGRRGDQIKEMDLN-LHPELKGPLK 630
Query: 576 RLANMPDVNIGIISG 590
L + P I ++SG
Sbjct: 631 ALCSDPSTTIVVLSG 645
|
|
| ASPGD|ASPL0000027021 tpsA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 470 (170.5 bits), Expect = 9.6e-59, Sum P(2) = 9.6e-59
Identities = 102/272 (37%), Positives = 156/272 (57%)
Query: 242 DFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQ--LA 299
D +GFH DY +F+ C R LG N +E G+ + A PIGI E+F +
Sbjct: 205 DLIGFHTYDYTRHFLSACSRLLGLPTTPNG--IEFQGKIIACGAFPIGIDPEKFKEGLKK 262
Query: 300 ENAPENL-----KDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354
E + + K + +K+++GVDRLDY KG+ ++ A E L HPE+V KV +Q++V
Sbjct: 263 EKVQKRIATLEQKFQGVKLMVGVDRLDYIKGVPQKLHALEVFLSDHPEWVGKVVLVQVAV 322
Query: 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVT 414
PSR DV EY+ L+ +++LVGRING+F + PI ++ + +EL ALY S +V+
Sbjct: 323 PSRQDVEEYQNLRAVVNELVGRINGKFGTVEFMPIHFLHKSVNFDELIALYAVSDACVVS 382
Query: 415 PLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCM 474
RDGMNLV+ EY+A Q + G L+LS FAGA ++ +++VNP+ + A H A+ M
Sbjct: 383 STRDGMNLVSYEYIATQEKRHGSLVLSEFAGAAQSLNGSIIVNPWNTEELAAAYHEAVTM 442
Query: 475 PRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506
++R L S+L + W SF++ +
Sbjct: 443 SDEQRALNFSKLDKYVNKYTSAFWGQSFVTEL 474
|
|
| CGD|CAL0004028 TPS1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 487 (176.5 bits), Expect = 5.0e-58, Sum P(2) = 5.0e-58
Identities = 107/289 (37%), Positives = 168/289 (58%)
Query: 227 YQLLVAATTIRQ--VAYDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVK 284
Y++L I + ++ D +GFH DY +FI R + + N ++ GR++ +
Sbjct: 180 YRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNG-IKYQGRSISIG 238
Query: 285 ALPIGIPFERFVQ--LAENAPENLKD-----ENLKVILGVDRLDYTKGLVHRIKAFERLL 337
A PIGI + F+ ++ E +K +++KVI+GVDRLDY KG+ ++ AFE L
Sbjct: 239 AFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEVFL 298
Query: 338 EKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIG 397
++PE++ KV +Q++VPSR DV EY++L+ + +LVGRING F + PI Y+ I
Sbjct: 299 NENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSIP 358
Query: 398 QEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVN 457
+EL +LY S + LV+ RDGMNLV+ EY+ACQ GVLILS FAGA ++ AL+VN
Sbjct: 359 FDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLNGALIVN 418
Query: 458 PYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506
P+ + + + +L +P ++RE +L + W SF+ +
Sbjct: 419 PWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKEL 467
|
|
| UNIPROTKB|Q92410 TPS1 "Alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 487 (176.5 bits), Expect = 5.0e-58, Sum P(2) = 5.0e-58
Identities = 107/289 (37%), Positives = 168/289 (58%)
Query: 227 YQLLVAATTIRQ--VAYDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVK 284
Y++L I + ++ D +GFH DY +FI R + + N ++ GR++ +
Sbjct: 180 YRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNG-IKYQGRSISIG 238
Query: 285 ALPIGIPFERFVQ--LAENAPENLKD-----ENLKVILGVDRLDYTKGLVHRIKAFERLL 337
A PIGI + F+ ++ E +K +++KVI+GVDRLDY KG+ ++ AFE L
Sbjct: 239 AFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEVFL 298
Query: 338 EKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIG 397
++PE++ KV +Q++VPSR DV EY++L+ + +LVGRING F + PI Y+ I
Sbjct: 299 NENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSIP 358
Query: 398 QEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVN 457
+EL +LY S + LV+ RDGMNLV+ EY+ACQ GVLILS FAGA ++ AL+VN
Sbjct: 359 FDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLNGALIVN 418
Query: 458 PYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506
P+ + + + +L +P ++RE +L + W SF+ +
Sbjct: 419 PWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKEL 467
|
|
| SGD|S000000330 TPS1 "Synthase subunit of trehalose-6-P synthase/phosphatase complex" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 470 (170.5 bits), Expect = 1.1e-57, Sum P(2) = 1.1e-57
Identities = 109/298 (36%), Positives = 169/298 (56%)
Query: 227 YQLLVAATTIRQ--VAYDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVK 284
Y++L I + ++ D VGFH DY +F+ R L N VE GR V+V
Sbjct: 194 YRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLNVNTLPNG--VEYQGRFVNVG 251
Query: 285 ALPIGIPFERFV-----QLAENAPENLKD--ENLKVILGVDRLDYTKGLVHRIKAFERLL 337
A PIGI ++F + + + LK+ + K+I+GVDRLDY KG+ ++ A E L
Sbjct: 252 AFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDRLDYIKGVPQKLHAMEVFL 311
Query: 338 EKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIG 397
+HPE+ KV +Q++VPSR DV EY+ L+ +++LVGRING+F + PI ++ I
Sbjct: 312 NEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTVEFVPIHFMHKSIP 371
Query: 398 QEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVN 457
EEL +LY S + LV+ RDGMNLV+ EY+ACQ + G LILS F GA ++ A++VN
Sbjct: 372 FEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQEEKKGSLILSEFTGAAQSLNGAIIVN 431
Query: 458 PYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDS 515
P+ D ++ ++ AL +P ++E+ +L + W +F+ + + + S
Sbjct: 432 PWNTDDLSDAINEALTLPDVKKEVNWEKLYKYISKYTSAFWGENFVHELYSTSSSSTS 489
|
|
| UNIPROTKB|P31677 otsA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 481 (174.4 bits), Expect = 1.3e-56, Sum P(2) = 1.3e-56
Identities = 115/282 (40%), Positives = 163/282 (57%)
Query: 234 TTIRQVA-YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELA-GRTVHVKALPIGI- 290
T + Q+ YD +GF E+ L F+DC +RV + A G+ + PIGI
Sbjct: 172 TLLEQLCDYDLLGFQTENDRLAFLDCLSNL--TRVTTRSAKSHTAWGKAFRTEVYPIGIE 229
Query: 291 PFERFVQLAENAPENL---KDE--NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVE 345
P E Q A P L K E N++ I V+RLDY+KGL R A+E LLEK+P++
Sbjct: 230 PKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHG 289
Query: 346 KVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALY 405
K+ + QI+ SR DV Y+ ++ +++ GRING++ + W+P+ Y+ ++ L ++
Sbjct: 290 KIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIF 349
Query: 406 RDSAIALVTPLRDGMNLVAKEYVACQI-REPGVLILSPFAGAGGMMHEALLVNPYEIDAA 464
R S + LVTPLRDGMNLVAKEYVA Q PGVL+LS FAGA + AL+VNPY+ D
Sbjct: 350 RYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEV 409
Query: 465 ANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506
A L RAL M ER R +++ + D+NHW F+S +
Sbjct: 410 AAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDL 451
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q54K57 | TPSA_DICDI | 2, ., 4, ., 1, ., 1, 5 | 0.3026 | 0.6460 | 0.7121 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 808 | |||
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 1e-166 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 1e-165 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 1e-146 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-129 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 1e-125 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 2e-84 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 8e-80 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 7e-78 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 4e-68 | |
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 3e-53 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 1e-22 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 1e-19 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 8e-19 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 2e-18 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 1e-17 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 2e-15 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 3e-15 | |
| PLN02580 | 384 | PLN02580, PLN02580, trehalose-phosphatase | 5e-13 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 2e-12 | |
| PLN02151 | 354 | PLN02151, PLN02151, trehalose-phosphatase | 6e-12 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 6e-11 | |
| PLN03017 | 366 | PLN03017, PLN03017, trehalose-phosphatase | 1e-09 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 8e-09 | |
| PRK10187 | 266 | PRK10187, PRK10187, trehalose-6-phosphate phosphat | 2e-08 | |
| TIGR01484 | 204 | TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, | 1e-07 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 2e-07 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 1e-05 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 7e-05 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 7e-05 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 5e-04 | |
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 0.002 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 0.004 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 497 bits (1282), Expect = e-166
Identities = 234/742 (31%), Positives = 349/742 (47%), Gaps = 136/742 (18%)
Query: 109 GIWIGWSGL-YDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTF 167
G+W+GW GL + +E A + GL +PV + +E + YY G CN T
Sbjct: 43 GLWVGWPGLDLEEESEEQ--RARIEPRLEELGL-----VPVFLSAEEVDRYYEGFCNSTL 95
Query: 168 WPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDY 227
WPLFH P+ F W++Y +VN+ FA A+ + + D VVW+HDY
Sbjct: 96 WPLFHYFPEYTEFEDRFWESYERVNQRFAE----AIAAIARPGD---------VVWVHDY 142
Query: 228 QLLVAATTIRQ------VAY----------------------------DFVGFHIEDYCL 253
QL++ +R+ + + D +GFH DY
Sbjct: 143 QLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVR 202
Query: 254 NFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAP---------E 304
+F+ R LG + + L GR V V A P+GI +++F A++ +
Sbjct: 203 HFLSSVLRVLGYETELGE--IRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQ 260
Query: 305 NLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYK 364
+L+ K+IL +DRLDYTKG+ R+ AFER LEK+PE+ KV +Q++VPSRT V +Y+
Sbjct: 261 DLRG--RKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQ 318
Query: 365 ALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVA 424
+K E+D+LVGRING F +W+PI Y + + EEL ALYR + +ALVTPLRDGMNLVA
Sbjct: 319 EMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVA 378
Query: 425 KEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMS 484
KEYVA + GVLILS AGA + EALLVNP +I+ A + RAL MP +E+ RM
Sbjct: 379 KEYVASRTDGDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQ 438
Query: 485 QLRHREQQLDVNHWMNSFLSSMGALDNDDD---SDPLSAKTLQLTLDDFDLYLNNYVDGN 541
++ R ++ DV+ W + FL + + S P++ + + +
Sbjct: 439 AMQERLRRYDVHKWASDFLDELREAAEKNKAFASKPITPAAAEEIIARY--------RAA 490
Query: 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPD 601
+ L+LDYDGTL P P+LAV +E + +L RLA P+ ++ IISGR + L
Sbjct: 491 SRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLE---- 546
Query: 602 LAVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGT- 660
++P + HG P G
Sbjct: 547 ------------RWFGDLP-----------------------IHLVAEHGAWSRAPGGEW 571
Query: 661 KFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETPIE----RREYIID 716
+ + PV E+ + +R +++ D G++IE K L +HYR E R +I
Sbjct: 572 QLLEPVATEWKDAVRPILEEFVD--RTPGSFIEEKEASLAWHYRNADPELGEARANELIL 629
Query: 717 RASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAGN--- 773
S + A E +E +P ++GRA +L + ++ G+
Sbjct: 630 ALSSLLSNAPLEVLRGNKVVEVRPAG-VNKGRAVRRLL------EAGPYDFVLAIGDDTT 682
Query: 774 -EDAMLALQGIACTFRVDSSPT 794
ED AL A T +V +
Sbjct: 683 DEDMFRALPETAITVKVGPGES 704
|
Length = 726 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 485 bits (1251), Expect = e-165
Identities = 190/439 (43%), Positives = 254/439 (57%), Gaps = 63/439 (14%)
Query: 109 GIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFW 168
G+W+GWSG + + + D+ T L V PV + +EFE YYNG N W
Sbjct: 43 GLWVGWSG--------IEEDEEEEDEVSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLW 94
Query: 169 PLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQ 228
PLFH D A F+ E W+ Y +VN +FA+ A+ V++ D +VW+HDY
Sbjct: 95 PLFHYRLDLARFDREDWEAYVRVNRKFAD----AIAEVLRPGD---------LVWVHDYH 141
Query: 229 LLVAATTIRQ----------------------------------VAYDFVGFHIEDYCLN 254
LL+ +R+ + D +GF E Y N
Sbjct: 142 LLLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARN 201
Query: 255 FIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAP-----ENLKD- 308
F+ CC R LG V + VE GR V V A PIGI + F +LA + L++
Sbjct: 202 FLSCCSRLLGLEVTDDG-GVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRER 260
Query: 309 -ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALK 367
K+I+GVDRLDY+KG+ R+ AFERLLE++PE+ KV +QI+VPSRTDV EY+ L+
Sbjct: 261 LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELR 320
Query: 368 DEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEY 427
E+++LVGRING+F +W+P+RY++ + +EELAALYR + +ALVTPLRDGMNLVAKEY
Sbjct: 321 REVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEY 380
Query: 428 VACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLR 487
VACQ +PGVLILS FAGA + ALLVNPY+ID A+ +HRAL MP +ER R +LR
Sbjct: 381 VACQDDDPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLR 440
Query: 488 HREQQLDVNHWMNSFLSSM 506
+ DV W NSFL +
Sbjct: 441 EYVRTHDVQAWANSFLDDL 459
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 437 bits (1126), Expect = e-146
Identities = 177/448 (39%), Positives = 242/448 (54%), Gaps = 63/448 (14%)
Query: 100 MNGVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYY 159
+ G G+W GWSG + + E + T + PV + +++ + YY
Sbjct: 29 LLGALKATGGVWFGWSG-------KTVEEDEGEPFLRTELEGKITLAPVFLSEEDVDGYY 81
Query: 160 NGCCNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVV 219
NG N T WPLFH PD ++ + W+ Y +VN FA AL +++ D
Sbjct: 82 NGFSNSTLWPLFHYRPDLIRYDRKAWEAYRRVNRLFAE----ALAPLLQPGD-------- 129
Query: 220 PVVWIHDYQLLVAATTIRQ----------------------------------VAYDFVG 245
+VW+HDY L++ +R+ +AYD VG
Sbjct: 130 -IVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVG 188
Query: 246 FHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENA--- 302
F D NF+ R LG N + GRTV V A PIGI +RF + A+
Sbjct: 189 FQTYDDARNFLSAVSRELGLETLPNGVES--GGRTVRVGAFPIGIDVDRFAEQAKKPSVQ 246
Query: 303 --PENLKDE--NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRT 358
L++ K+I+GVDRLDY+KGL R+ AFER LE+HPE+ KV +QI+VPSR
Sbjct: 247 KRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRG 306
Query: 359 DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRD 418
DV EY+ L+ ++++LVGRINGRF +W+PIRY+ +EEL ALYR + + LVTPLRD
Sbjct: 307 DVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRD 366
Query: 419 GMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDE 478
GMNLVAKEYVA Q + GVLILS FAGA ++ ALLVNPY+ID A+ + RAL MP +E
Sbjct: 367 GMNLVAKEYVAAQDPKDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEE 426
Query: 479 RELRMSQLRHREQQLDVNHWMNSFLSSM 506
RE R + + ++ DV W FLS +
Sbjct: 427 REERHRAMMDKLRKNDVQRWREDFLSDL 454
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 393 bits (1012), Expect = e-129
Identities = 168/451 (37%), Positives = 232/451 (51%), Gaps = 63/451 (13%)
Query: 97 HLKMNGVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFE 156
+ + G WIGWSG E+ + + TS+ VI + +++E
Sbjct: 47 VTALKPLLRVDGGTWIGWSGTTG-----PTDESSDDLKERIGEFTSAPVI---LSDEDYE 98
Query: 157 AYYNGCCNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKT 216
YYNG N WPLFH D + W Y KVN +FA + + + + D
Sbjct: 99 GYYNGFSNAILWPLFHYFIDDVAYERNWWDAYVKVNRKFA----DKIVEIYEPGD----- 149
Query: 217 NVVPVVWIHDYQLLVAATTIRQ----------------------------------VAYD 242
++W+HDY LL+ +R+ + D
Sbjct: 150 ----IIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGAD 205
Query: 243 FVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENA 302
+GF E Y NF+D C R LG D + GR V V A PIGI E F + ++
Sbjct: 206 LIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSP 265
Query: 303 PENLK--------DENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354
K N K+I+GVDRLDY+KG+ R+ AFERLLE++PE+ KV LQI+
Sbjct: 266 SVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAP 325
Query: 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVT 414
PSR DV EY+AL+ ++++LVGRING F +W+P+ Y+ + + EL ALYR + + LVT
Sbjct: 326 PSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVT 385
Query: 415 PLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCM 474
PLRDGMNLVAKEYVA Q +PGVLILS FAGA + +AL+VNP++ A+ + RAL M
Sbjct: 386 PLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTM 445
Query: 475 PRDERELRMSQLRHREQQLDVNHWMNSFLSS 505
+ER+ R +L + DV W NSFL
Sbjct: 446 SLEERKERHEKLLKQVLTHDVARWANSFLDD 476
|
Length = 486 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 383 bits (987), Expect = e-125
Identities = 164/452 (36%), Positives = 237/452 (52%), Gaps = 67/452 (14%)
Query: 100 MNGVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYY 159
+NG++ G+W+GW G+ + E +P D+ +PV +D ++ + YY
Sbjct: 37 LNGLSEATEGVWVGWPGVP-------VDEDEPKDRVSQLLKEKFTCVPVFLDDEDVDEYY 89
Query: 160 NGCCNGTFWPLFHSMPDRAV---FNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKT 216
NG N WPLFH F+ W Y KVN+ FA+ + V KD D
Sbjct: 90 NGFSNSILWPLFHYRLPPNNEDEFDRSWWDAYVKVNKLFAD----KIVEVYKDGD----- 140
Query: 217 NVVPVVWIHDYQLLVAATTIRQ----------------------------------VAYD 242
++W+HDY L++ +R+ + D
Sbjct: 141 ----LIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSSEIFRCLPVREEILRGLLGAD 196
Query: 243 FVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENA 302
+GFH DY +F+ CC R LG ++ VE GRTV V A PIGI R ++
Sbjct: 197 LIGFHTYDYARHFLSCCSRLLGLET-TSDGGVEYGGRTVSVGAFPIGIDPGRIESGLKSP 255
Query: 303 PENLKDENL--------KVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354
K + L K+ILGVDRLDY KG+ ++ AFER LE++PE+ KV +QI+V
Sbjct: 256 SVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLAFERFLEEYPEWRGKVVLVQIAV 315
Query: 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVT 414
PSR DV EY+ L+ ++++LVGRING F +++P+ ++ + +EL ALY + + LVT
Sbjct: 316 PSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHLHRSLDFDELIALYAIADVCLVT 375
Query: 415 PLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHE-ALLVNPYEIDAAANVLHRALC 473
LRDGMNLVA EYVACQ GVLILS FAGA +++ A+LVNP++I+ A ++ AL
Sbjct: 376 SLRDGMNLVAYEYVACQQDRKGVLILSEFAGAAQSLNDGAILVNPWDIEEVAEAINEALT 435
Query: 474 MPRDERELRMSQLRHREQQLDVNHWMNSFLSS 505
M +ER+ R +L + DV +W SFLS
Sbjct: 436 MSEEERQKRHRKLFKYISKHDVQYWAESFLSD 467
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 288 bits (738), Expect = 2e-84
Identities = 202/612 (33%), Positives = 282/612 (46%), Gaps = 125/612 (20%)
Query: 106 EITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNG 165
E WIGW+G+ PDEV +A T L + IPV +D++ YYNG CN
Sbjct: 133 EFEARWIGWAGVN--VPDEV------GQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNN 184
Query: 166 TFWPLFHSMP----DRAVFNAET------WKTYCKVNEEFANCTLNALRNVIKDLDAAGK 215
WPLFH + DR A T + Y K N+ FA+ G
Sbjct: 185 ILWPLFHYLGLPQEDRL---ATTRSFQSQFAAYKKANQMFADVVNEHYEE--------GD 233
Query: 216 TNVVPVVWIHDYQLLVAATTIRQ----------------------------------VAY 241
VVW HDY L+ +++ +A
Sbjct: 234 -----VVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAA 288
Query: 242 DFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAE- 300
D VGFH DY +F+ C R LG ++ VE GR V A PIGI +RF++ E
Sbjct: 289 DLVGFHTYDYARHFVSACTRILG--LEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET 346
Query: 301 -NAPENLKD-----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354
+++K+ KV+LGVDRLD KG+ +I AFE+ LE++PE+ +KV LQI+V
Sbjct: 347 PQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAV 406
Query: 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVT 414
P+RTDV EY+ L ++ ++VGRINGRF PI ++ + L ALY + +ALVT
Sbjct: 407 PTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVT 466
Query: 415 PLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHE-ALLVNPYEIDAAANVLHRALC 473
LRDGMNLV+ E+VACQ + GVLILS FAGA + A+LVNP+ I A + +AL
Sbjct: 467 SLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALN 526
Query: 474 MPRDERELRMSQLRHREQQLDV-NH----WMNSFLSSMGALDNDDDSDP-LSAKTLQLTL 527
MP +ERE RHR + V H W +F+S + ND + L + + L
Sbjct: 527 MPEEERE-----KRHRHNFMHVTTHTAQEWAETFVSEL----NDTVVEAQLRTRQVPPQL 577
Query: 528 DDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGI 587
D + Y+ N +L LIL ++ TLT P R +++ M
Sbjct: 578 PPEDA-IQRYLQSNNRL-LILGFNATLTEPVDTP---------GRRGDQIKEM------- 619
Query: 588 ISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYA 647
LR HP+L K L L + P I ++SG L + + A
Sbjct: 620 -------ELRLHPEL-------KEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDMWLA 665
Query: 648 GSHGLEILHPDG 659
+G+ + H G
Sbjct: 666 AENGMFLRHTKG 677
|
Length = 934 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 264 bits (677), Expect = 8e-80
Identities = 148/441 (33%), Positives = 220/441 (49%), Gaps = 69/441 (15%)
Query: 109 GIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFW 168
G+W GWSG E E P + +T + ++ + +++ YYN N W
Sbjct: 37 GLWFGWSG-------ETGNEDQPLKKVKKGNITWASF---NLSEQDYDEYYNQFSNAVLW 86
Query: 169 PLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQ 228
P FH D F W+ Y +VN A+ L ++KD D ++WIHDY
Sbjct: 87 PAFHYRLDLVQFQRPAWEGYLRVNALLAD----KLLPLLKDDD---------IIWIHDYH 133
Query: 229 LLVAATTIRQVA----------------------------------YDFVGFHIEDYCLN 254
LL A+ +R+ YD +GF E+ L
Sbjct: 134 LLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLA 193
Query: 255 FIDCCCR--RLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENA--PE--NLKD 308
F+DC R+ +R +++ G+ + PIGI + + A P+ LK
Sbjct: 194 FLDCLSNLTRVTTRSGKSH---TAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKA 250
Query: 309 E--NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKAL 366
E N++ I V+RLDY+KGL R A+E LLEK+P++ K+ + QI+ SR DV Y+ +
Sbjct: 251 ELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDI 310
Query: 367 KDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKE 426
+ +++ GRING++ + W+P+ Y+ ++ L ++R S + LVTPLRDGMNLVAKE
Sbjct: 311 RHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKE 370
Query: 427 YVACQ-IREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMSQ 485
YVA Q PGVL+LS FAGA + AL+VNPY+ D A L RAL MP ER R ++
Sbjct: 371 YVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAE 430
Query: 486 LRHREQQLDVNHWMNSFLSSM 506
+ + D+NHW F+S +
Sbjct: 431 MLDVIVKNDINHWQECFISDL 451
|
Length = 474 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 267 bits (685), Expect = 7e-78
Identities = 182/536 (33%), Positives = 256/536 (47%), Gaps = 89/536 (16%)
Query: 111 WIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPL 170
WIGW G+ +V E A T L IPV ++ + F+ YYNG CN WP+
Sbjct: 55 WIGWPGV------DVHDEIGKA--ALTESLAEKGCIPVFLN-EVFDQYYNGYCNNILWPI 105
Query: 171 FHSM----PDR--AVFNAET-WKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVW 223
FH M DR A E+ + Y K N F + V+K+ G VVW
Sbjct: 106 FHYMGLPQEDRHDATRTFESQYDAYKKANRMFLD--------VVKENYEEGD-----VVW 152
Query: 224 IHDYQLLVAATTIRQ----------------------------------VAYDFVGFHIE 249
HDY L+ +++ + D +GFH
Sbjct: 153 CHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTY 212
Query: 250 DYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAPENLKDE 309
D+ +F+ C R LG V+ + V G+ V PIGI ERF+ E +
Sbjct: 213 DFARHFLSACTRILG--VEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMK 270
Query: 310 NL-------KVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLE 362
L KVILGVDRLD KG+ + AFE+ LE++PE+ +KV +QI+VP+R DV E
Sbjct: 271 ELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPE 330
Query: 363 YKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNL 422
Y+ LK ++ +LVGRINGRF + PI ++ + L ALY + + LVT LRDGMNL
Sbjct: 331 YQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNL 390
Query: 423 VAKEYVACQIREPGVLILSPFAGAGGMMHE-ALLVNPYEIDAAANVLHRALCMPRDEREL 481
V+ E+VACQ + GVL+LS FAGAG + ALLVNP+ I ++ + AL M +ERE
Sbjct: 391 VSYEFVACQKAKKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERET 450
Query: 482 RMSQLRHREQQL---DVNHWMNSFLSSMGALDNDDDSDPLSAKTLQLTLDDFDLYLNNYV 538
R RH Q + W + F+S L++ L + + L L + D+ + Y
Sbjct: 451 RH---RHNFQYVKTHSAQKWADDFMSE---LNDIIVEAELRTRNIPLELPEQDV-IQQYS 503
Query: 539 DGNCKLSLILDYDGTLTP----LTSHPDLAVMSEETKRVLERLANMPDVNIGIISG 590
N +L LIL + GTLT DL + E K L+ L + P + ++S
Sbjct: 504 KSNNRL-LILGFYGTLTEPRNSQIKEMDLG-LHPELKETLKALCSDPKTTVVVLSR 557
|
Length = 797 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 233 bits (596), Expect = 4e-68
Identities = 137/459 (29%), Positives = 214/459 (46%), Gaps = 85/459 (18%)
Query: 109 GIWIGWSGLYDLAPDEVIPEADPNDQAPTS--GLTSSQVIPVHVDKDEFEAYYNGCCNGT 166
G W+ W+ E + + + + + K++ + +Y+
Sbjct: 42 GTWVAWA--------EHDENSGETFDSHMTVPAEYKLTAARIPLSKEQVDIFYHITSKEA 93
Query: 167 FWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAA-GKTNVVPVVWIH 225
FWP+ H+ P+R F + W+ + KVN FA +AA G T VW+H
Sbjct: 94 FWPILHTFPERFQFREDDWQVFLKVNRAFAEAACL---------EAAEGAT-----VWVH 139
Query: 226 DYQLLVAATTIRQ------VAY----------------------------DFVGFHIEDY 251
DY L + IRQ +A+ D++GFHI Y
Sbjct: 140 DYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRY 199
Query: 252 CLNFIDC--------------CCRRL---GSRVDRNNMLVEL--AGRTVHVKALPIGIPF 292
NF+D R G+ + M L R V + A P+G
Sbjct: 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDP 259
Query: 293 ERFVQLAENAP-----ENLKDE--NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVE 345
ER A E ++ E +K+IL +R+DYTKG++ ++ A+ERLLE+ PE +
Sbjct: 260 ERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERRPELLG 319
Query: 346 KVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALY 405
KVT + VP+ + + Y L+ +++Q VGRINGRF++ W+P+++ + EE++A +
Sbjct: 320 KVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWF 379
Query: 406 RDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYEIDAAA 465
+ + +TPLRDG+NLVAKEYVA Q GVL+LS FAGA + ALL NPY+
Sbjct: 380 AMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVELKGALLTNPYDPVRMD 439
Query: 466 NVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLS 504
++ AL MP+ E++ RM ++ DV W + FL+
Sbjct: 440 ETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLA 478
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 199 bits (506), Expect = 3e-53
Identities = 152/509 (29%), Positives = 223/509 (43%), Gaps = 89/509 (17%)
Query: 128 EADPNDQAPTSG--LTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSM----PDRA-VF 180
E N+Q S L + + +P + D F YY+G C WPLFH M PD F
Sbjct: 116 EIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRF 175
Query: 181 NAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQ-- 238
N W+ Y VN+ FA+ + VI D VWIHDY L+V T +R+
Sbjct: 176 NRSLWQAYVSVNKIFAD----RIMEVINPED--------DFVWIHDYHLMVLPTFLRKRF 223
Query: 239 --------------------------------VAYDFVGFHIEDYCLNFIDCCCRRLGSR 266
+ D +GFH DY +F+ CC R LG
Sbjct: 224 NRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLS 283
Query: 267 VD--RNNMLVELAGRTVHVKALPIGI---PFERFVQLAENAP------ENLKDENLKVIL 315
+ R + +E GRTV +K LP+GI + + L E + D++ ++L
Sbjct: 284 YESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLL 343
Query: 316 GVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVG 375
GVD +D KG+ ++ A E+LL +HPE+ KV +QI+ P+R + K ++ E V
Sbjct: 344 GVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVK 403
Query: 376 RINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQ---- 431
RIN F KP + PI I + E A Y + LVT +RDGMNL+ EY+ +
Sbjct: 404 RINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNE 463
Query: 432 -----------IREPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERE 480
+ +L++S F G + A+ VNP+ IDA A+ + AL M E++
Sbjct: 464 KLDKLLGLEPSTPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQ 523
Query: 481 LRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDP-------LSAKTLQLTLDDFDLY 533
LR + DV +W SFL + D LS + + L + L
Sbjct: 524 LRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLS 583
Query: 534 LNNYVDG---NCKLSLILDYDGTLTPLTS 559
+ + V +++LDYDGTL P S
Sbjct: 584 MEHIVSAYKRTTTRAILLDYDGTLMPQAS 612
|
Length = 854 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 101 bits (255), Expect = 1e-22
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDK 60
AGGL TA+ ++ G+W+GWSG + + + D+ T L V PV +
Sbjct: 27 AGGLATALKGLLKRTGGLWVGWSG--------IEEDEEEEDEVSTELLGEYTVAPVFLSP 78
Query: 61 DEFEAYYNGCCNGTFWPLFHSMPDRAVFNAETWK 94
+EFE YYNG N WPLFH D A F+ E W+
Sbjct: 79 EEFEGYYNGFSNEVLWPLFHYRLDLARFDREDWE 112
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 88.5 bits (220), Expect = 1e-19
Identities = 54/241 (22%), Positives = 89/241 (36%), Gaps = 53/241 (21%)
Query: 547 ILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMS 606
LDYDGTL+P+ PD AV S+ +L RLA+ P + IISGR
Sbjct: 1 FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGR--------------- 45
Query: 607 EETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVHPV 666
R E+L + + A HG I P G + +
Sbjct: 46 ----------------------SRAFEDLF--FGVPNLGLAAEHGAFIRDPGGEDWTNLA 81
Query: 667 PKEYAEKLRQLIKALQDEVCH-DGAWIENKGVLLTFHYRETPIERREYIIDRASQIFLEA 725
E + +++ L++ G++IE+K L +HYR + + LE+
Sbjct: 82 EVEDLDWKKEVAAILEEYTERTPGSYIEDKKSALAWHYRNADDDFGVFQAKEL-AEHLES 140
Query: 726 GFEPHNAL------MAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAGN----ED 775
+ + + +E +P +G+A+ +L G S + G+ ED
Sbjct: 141 VLKDYPDVRVTQGKKVVEVRPVGVS-KGKAAERLLEE-LGSAGSPPDFPLCIGDDRTDED 198
Query: 776 A 776
Sbjct: 199 M 199
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 86.4 bits (214), Expect = 8e-19
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 592 TLENLRHHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHG 651
TL + PD AV+S+ +L++LA P I IISGR V + + AG HG
Sbjct: 13 TLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEHG 72
Query: 652 LEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEVC-HDGAWIENKGVLLTFHYRETPIER 710
E + +G+ E + L++E+ G +IE KGV L +HYR+ P+
Sbjct: 73 CE-MKDNGSCQDWVNLTEKIPSWKVRANELREEITTRPGVFIERKGVALAWHYRQAPVPE 131
Query: 711 --REYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHIL 754
R + +I E + +E KP ++G +L
Sbjct: 132 LARFRAKELKEKILSFTDLEVMDGKAVVELKPR-FVNKGEIVKRLL 176
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 90.4 bits (225), Expect = 2e-18
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 1 AGGLVTAVAPVVIDCKGIWIGWSGL-YDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVD 59
GGL T + G+W+GW GL + +E A + GL +PV +
Sbjct: 27 VGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQ--RARIEPRLEELGL-----VPVFLS 79
Query: 60 KDEFEAYYNGCCNGTFWPLFHSMPDRAVFNAETWKV 95
+E + YY G CN T WPLFH P+ F W+
Sbjct: 80 AEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRFWES 115
|
Length = 726 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 1e-17
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDK 60
AGGL A+ + G+W GWSG + + E + T + PV + +
Sbjct: 22 AGGLAVALLGALKATGGVWFGWSG-------KTVEEDEGEPFLRTELEGKITLAPVFLSE 74
Query: 61 DEFEAYYNGCCNGTFWPLFHSMPDRAVFNAETWK 94
++ + YYNG N T WPLFH PD ++ + W+
Sbjct: 75 EDVDGYYNGFSNSTLWPLFHYRPDLIRYDRKAWE 108
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 2e-15
Identities = 59/261 (22%), Positives = 99/261 (37%), Gaps = 59/261 (22%)
Query: 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDL 602
K L LDYDGTLT + HP+ AV + +L+ LA+ P + IISGR+L L
Sbjct: 18 KRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELER---- 73
Query: 603 AVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKF 662
+ + + HG E+ P+G +
Sbjct: 74 -----------------------------------LFGVPGIGLIAEHGAEVRDPNGKWW 98
Query: 663 VHPVPKEYAEKLRQLIKALQDEVCH-DGAWIENKGVLLTFHYRETPIERREY--IIDRAS 719
++ + L+++ L+ V G++IE KG + HYR + + + A+
Sbjct: 99 INLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAAT 158
Query: 720 QIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAGN----ED 775
I E M +E +PP + + ++ + + I+AG+ ED
Sbjct: 159 LI-NELKLRVTPGKMVVELRPPGVS---KGA--AIKYIMDELPFDGRFPIFAGDDLTDED 212
Query: 776 AMLALQGIACTFRVDSSPTVK 796
A A+ + S TVK
Sbjct: 213 AFAAVNKL-------DSITVK 226
|
Length = 266 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 78.9 bits (195), Expect = 3e-15
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDK 60
AGGLVTA+ P++ G WIGWSG E+ + + TS+ VI +
Sbjct: 43 AGGLVTALKPLLRVDGGTWIGWSGTTG-----PTDESSDDLKERIGEFTSAPVI---LSD 94
Query: 61 DEFEAYYNGCCNGTFWPLFHSMPDRAVFNAETWK 94
+++E YYNG N WPLFH D + W
Sbjct: 95 EDYEGYYNGFSNAILWPLFHYFIDDVAYERNWWD 128
|
Length = 486 |
| >gnl|CDD|215317 PLN02580, PLN02580, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 5e-13
Identities = 64/289 (22%), Positives = 117/289 (40%), Gaps = 79/289 (27%)
Query: 541 NCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHP 600
K++L LDYDGTL+P+ PD A+MS+ + ++ +A ++ P
Sbjct: 117 GKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVA------------------KYFP 158
Query: 601 DLAVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGT 660
IISGR+ + + ++V + ++ YAGSHG++I+ P
Sbjct: 159 -----------------------TAIISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRE 195
Query: 661 KFV--HPVPKEYAEKLRQLIKALQ---------DEV---------CHDGAWIENKGVLLT 700
HP + ++ + + Q DEV GA +EN ++
Sbjct: 196 SVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVS 255
Query: 701 FHYR-------ETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHI 753
HYR + ++ + ++ L G + +E +P + W++G+A +
Sbjct: 256 VHYRNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRK------VLEVRPVIDWNKGKAVEFL 309
Query: 754 LRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSS 798
L ++ G+ + V IY G +EDA L+ + + S K S
Sbjct: 310 LESL-GLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES 357
|
Length = 384 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 2e-12
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDK 60
AGGLV+A+ V + + WIGW+G+ PDEV +A T L + IPV +D+
Sbjct: 121 AGGLVSALLGVK-EFEARWIGWAGVN--VPDEV------GQKALTKALAEKRCIPVFLDE 171
Query: 61 DEFEAYYNGCCNGTFWPLFHSMP 83
+ YYNG CN WPLFH +
Sbjct: 172 EIVHQYYNGYCNNILWPLFHYLG 194
|
Length = 934 |
| >gnl|CDD|177812 PLN02151, PLN02151, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 67.4 bits (164), Expect = 6e-12
Identities = 67/264 (25%), Positives = 112/264 (42%), Gaps = 78/264 (29%)
Query: 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDL 602
++ + LDYDGTL+P+ PD A MS++ + + +LA
Sbjct: 98 QIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC---------------------- 135
Query: 603 AVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPD-GTK 661
P I+SGR E + V + ++ YAGSHG++I P+ G+K
Sbjct: 136 ----------------FP---TAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGSK 176
Query: 662 FVH--------------PVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETP 707
+ PV E +KL + K++ GA +EN + H+R
Sbjct: 177 YKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIP------GAKVENNKFCASVHFRC-- 228
Query: 708 IERREYIIDRASQIFLEAGFEPHNALM------AIEAKPPVKWDQGRASIHILRTMYGVD 761
+E ++ D A+Q+ + + + LM +E +P +KWD+G+A +L ++ G
Sbjct: 229 VEENKW-SDLANQV--RSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESL-GYA 284
Query: 762 WSERVRIIYAG----NEDAMLALQ 781
V IY G +EDA L+
Sbjct: 285 NCTDVFPIYIGDDRTDEDAFKILR 308
|
Length = 354 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 65.0 bits (159), Expect = 6e-11
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDK 60
+GGLV+A+ + +G+W+GW G+ + E +P D+ +PV +D
Sbjct: 30 SGGLVSALNGLSEATEGVWVGWPGVP-------VDEDEPKDRVSQLLKEKFTCVPVFLDD 82
Query: 61 DEFEAYYNGCCNGTFWPLFHSMPDR 85
++ + YYNG N WPLFH
Sbjct: 83 EDVDEYYNGFSNSILWPLFHYRLPP 107
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|178591 PLN03017, PLN03017, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 1e-09
Identities = 52/255 (20%), Positives = 103/255 (40%), Gaps = 57/255 (22%)
Query: 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDL 602
++ + LDYDGTL+P+ PD A MS + +R +++LA
Sbjct: 111 QIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKC---------------------- 148
Query: 603 AVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHP----- 657
P I++GR ++ + V + ++ YAGSHG++I P
Sbjct: 149 ----------------FP---TAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFS 189
Query: 658 ----DGTKFVHPVPKEYAEKLRQLIKALQDEV-CHDGAWIENKGVLLTFHYRETPIERRE 712
++ +Y + ++ + L ++ GA +EN + H+R ++
Sbjct: 190 RHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWS 249
Query: 713 YIIDRASQIFLE-AGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYA 771
++ + + + E +P ++WD+G+A +L ++ G + V +Y
Sbjct: 250 ELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESL-GFGNTNNVFPVYI 308
Query: 772 G----NEDAMLALQG 782
G +EDA L+
Sbjct: 309 GDDRTDEDAFKMLRD 323
|
Length = 366 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 58.0 bits (139), Expect = 8e-09
Identities = 59/287 (20%), Positives = 102/287 (35%), Gaps = 32/287 (11%)
Query: 212 AAGKTNVVPVVWIHDYQLLVAATTIRQVAYDFVGFHIEDYCLNFIDCCCRRLGSRVDRNN 271
+ VV +H + + + ++ R + +
Sbjct: 104 LLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVI-AVSPALK 162
Query: 272 MLVELAGRTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIK 331
L+E G + +P GI E+F A L + V+L V RLD KGL I+
Sbjct: 163 ELLEALGVPNKIVVIPNGIDTEKF---APARIGLLPEGGKFVVLYVGRLDPEKGLDLLIE 219
Query: 332 AFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRY 391
A +L ++ P+ + P R + LE A K ++ V + G
Sbjct: 220 AAAKLKKRGPDI---KLVIVGDGPERREELEKLAKKLGLEDNV-KFLGYVP--------- 266
Query: 392 IFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM- 450
EELA L + + ++ L +G LV E +A G +++ G +
Sbjct: 267 ------DEELAELLASADVFVLPSLSEGFGLVLLEAMAA-----GTPVIASDVGGIPEVV 315
Query: 451 ---HEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLD 494
LLV P +++ A+ L + L P EL + E++
Sbjct: 316 EDGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEEFS 362
|
Length = 381 |
| >gnl|CDD|182291 PRK10187, PRK10187, trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 2e-08
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 592 TLENLRHHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHG 651
TL ++ HPD V+ + + L+ LA D + +ISGR++ L + + AG HG
Sbjct: 24 TLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHG 83
Query: 652 LEILHPDG-TKFVH---PVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETP 707
E +G T VH + ++ + +L + L GA +E KG+ HYR+ P
Sbjct: 84 AERRDINGKTHIVHLPDAIARDISVQLHTALAQL------PGAELEAKGMAFALHYRQAP 137
|
Length = 266 |
| >gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 49/253 (19%), Positives = 93/253 (36%), Gaps = 67/253 (26%)
Query: 546 LILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVM 605
L D DGTL +H E +R+ E V + +++GR+L ++
Sbjct: 2 LFFDLDGTLLDPNAHELSPETIEALERLREAG-----VKVVLVTGRSLAEIKE------- 49
Query: 606 SEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVHP 665
L+K + + +G I +P ++ P
Sbjct: 50 -----------------------------LLKQLPL---PLIAENGALIFYPGEILYIEP 77
Query: 666 --VPKEYA---EKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETP------IERREYI 714
V +E E++ +K+L + + G +IE+K + + HY + RE
Sbjct: 78 SDVFEEILGIKEEIGAELKSLSE--HYVGTFIEDKAIAVAIHYVGAELGQELDSKMRER- 134
Query: 715 IDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG-- 772
+++ + LE +E P D+G A +L+ + G +R I+ G
Sbjct: 135 LEKIGRNDLELEAIYVGK-TDLEVLPA-GVDKGSALQALLKELNG----KRDEILAFGDS 188
Query: 773 -NEDAMLALQGIA 784
N++ M + G+A
Sbjct: 189 GNDEEMFEVAGLA 201
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 2e-07
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 1 AGGLVTAVAPVVI-DCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVD 59
GGLV+A+ V + K WIGW G+ +V E A T L IPV ++
Sbjct: 38 PGGLVSALLGVKEFETK--WIGWPGV------DVHDEIGKA--ALTESLAEKGCIPVFLN 87
Query: 60 KDEFEAYYNGCCNGTFWPLFHSM 82
+ F+ YYNG CN WP+FH M
Sbjct: 88 -EVFDQYYNGYCNNILWPIFHYM 109
|
Length = 797 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 1e-05
Identities = 52/230 (22%), Positives = 91/230 (39%), Gaps = 36/230 (15%)
Query: 281 VHVKALPIGIPFERFVQLAENAPENLK-DENLKVILGVDRLDYTKGLVHRIKAFERLLEK 339
+ V +P G+ ERF A L E+ VIL V RL KG+ ++A +L ++
Sbjct: 170 ITV--IPNGVDTERFRPAPRAARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKE 227
Query: 340 HPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQE 399
+P+ V + + + LE A + + V F G + E
Sbjct: 228 YPD----VRLVIVGDGPLREELEALAAELGLGDRV-----TF-----------LGFVPDE 267
Query: 400 ELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV-LILSPFAGAGGMMHE---ALL 455
+L ALY + + ++ L +G LV E +A G+ ++ S G ++ + LL
Sbjct: 268 DLPALYAAADVFVLPSLYEGFGLVLLEAMAA-----GLPVVASDVGGIPEVVEDGETGLL 322
Query: 456 VNPYEIDAAANVLHRALCMPRDERELRMSQ--LRHREQQLDVNHWMNSFL 503
V P + +A A + R L P E R+ + ++ +
Sbjct: 323 VPPGDPEALAEAILRLLDDP--ELRRRLGEAARERVAERFSWDRVAARTE 370
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 7e-05
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 10/93 (10%)
Query: 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDK 60
AGGL + + G+W GWSG E E P + +T + ++ +
Sbjct: 21 AGGLAVGILGALKAAGGLWFGWSG-------ETGNEDQPLKKVKKGNITWASF---NLSE 70
Query: 61 DEFEAYYNGCCNGTFWPLFHSMPDRAVFNAETW 93
+++ YYN N WP FH D F W
Sbjct: 71 QDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPAW 103
|
Length = 474 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 7e-05
Identities = 45/167 (26%), Positives = 68/167 (40%), Gaps = 33/167 (19%)
Query: 312 KVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMD 371
+IL V RL KGL ++AF L E+HP K+ + D E K LK
Sbjct: 3 PIILFVGRLVPEKGLDLLLEAFALLKEQHPNL--KLVIV-------GDGEEEKKLKKLAL 53
Query: 372 QLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQ 431
+L N F G + E+L LYR + + ++ +G LV E +A
Sbjct: 54 KLGLEDNVIF-----------VGFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMAA- 101
Query: 432 IREPGVLILSPFAGAGGMMH------EALLVNPYEIDAAANVLHRAL 472
GV +++ GG LLV+P + +A A + + L
Sbjct: 102 ----GVPVIA--TDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKLL 142
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 5e-04
Identities = 66/243 (27%), Positives = 93/243 (38%), Gaps = 51/243 (20%)
Query: 271 NMLVELAGRTVHVKALPIGIPFERFVQLAENAPENLK-DENLKVILGVDRLDYTKGLVHR 329
+ L L V +P G+ ERF L E+ KVIL V RL KG+ +
Sbjct: 161 DELKALGIDPEKVTVIPNGVDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYL 220
Query: 330 IKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPI 389
I+A RLL+K P+ V + + D +AL+ +L + R
Sbjct: 221 IEALARLLKKRPD----VHLVIVG-----DGPLREALEALAAEL--GLEDRV-------- 261
Query: 390 RYIF-GCIGQEELAALYRDSAIALVTP-LRDGMNLVAKEYVACQ----------IREPGV 437
F G + EE+ A Y +A V P LR+G LV E +AC I E
Sbjct: 262 --TFLGAVPHEEVPAYYA-AADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPE--- 315
Query: 438 LILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNH 497
+I G LLV P + +A A + R L P L + R ++
Sbjct: 316 IITDGENG--------LLVPPGDPEALAEAILRLLADP--WLRLGRAARRRVAERFS--- 362
Query: 498 WMN 500
W N
Sbjct: 363 WEN 365
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.002
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 36 EADPNDQAPTSG--LTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSM----PDR-AVF 88
E N+Q S L + + +P + D F YY+G C WPLFH M PD F
Sbjct: 116 EIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRF 175
Query: 89 NAETWK 94
N W+
Sbjct: 176 NRSLWQ 181
|
Length = 854 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 283 VKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPE 342
++ + I E LAE E + VIL V RL KG I+AF L ++ P+
Sbjct: 161 IEVIYNPIDIEEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPD 220
Query: 343 Y 343
Sbjct: 221 A 221
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 808 | |||
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| KOG1050|consensus | 732 | 100.0 | ||
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.97 | |
| PLN03017 | 366 | trehalose-phosphatase | 99.97 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.97 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.97 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 99.96 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.96 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.96 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.91 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.91 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.91 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.91 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.91 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.91 | |
| PLN02316 | 1036 | synthase/transferase | 99.91 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.91 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.9 | |
| PLN00142 | 815 | sucrose synthase | 99.9 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.9 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.9 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.9 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.9 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.89 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.89 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.89 | |
| PLN02887 | 580 | hydrolase family protein | 99.88 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.88 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.88 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.88 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.87 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.87 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.87 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.86 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.86 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.86 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.86 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.86 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.86 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.86 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.86 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.85 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.85 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.85 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.85 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.85 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.85 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.84 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.84 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.83 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.83 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.83 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.83 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.82 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.82 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.82 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.81 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.81 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.81 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.81 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.8 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.8 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.79 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.79 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.79 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.79 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.79 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.78 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.78 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.78 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.78 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.78 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.77 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.77 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.76 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.76 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.75 | |
| PLN02423 | 245 | phosphomannomutase | 99.75 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.75 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.74 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.74 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.74 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.74 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.74 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.73 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.72 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.72 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.72 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.72 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.71 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.7 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.7 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.7 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.69 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.68 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.68 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.67 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.65 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.65 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.65 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.61 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.61 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.61 | |
| KOG1111|consensus | 426 | 99.59 | ||
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.58 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.57 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.57 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.56 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.56 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.55 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.54 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.51 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.47 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.41 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.39 | |
| KOG0853|consensus | 495 | 99.39 | ||
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.15 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.14 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.14 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.13 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.12 | |
| KOG3189|consensus | 252 | 99.09 | ||
| KOG1387|consensus | 465 | 99.08 | ||
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.08 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.08 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.04 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.04 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 98.81 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.81 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 98.79 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 98.75 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 98.45 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.36 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.3 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.29 | |
| KOG1050|consensus | 732 | 98.27 | ||
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 98.24 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.23 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.23 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.17 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.14 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.02 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 97.96 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.85 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.82 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 97.67 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.66 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 97.27 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.23 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 96.84 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 96.75 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.47 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.42 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.37 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 96.12 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.07 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.04 | |
| KOG2941|consensus | 444 | 95.88 | ||
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 95.81 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 95.78 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 95.56 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 95.33 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.13 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 95.12 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.39 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 94.35 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.29 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 93.98 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 93.91 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.72 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 93.54 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 92.89 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.5 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 92.42 | |
| PRK06769 | 173 | hypothetical protein; Validated | 92.4 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 92.38 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 92.35 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 92.32 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 91.99 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.94 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 91.66 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 91.65 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 91.43 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 91.3 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 91.29 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 91.28 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 91.2 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 91.04 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 90.83 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 90.74 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 90.67 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 90.63 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 90.18 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 90.07 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 90.07 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 90.04 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 89.96 | |
| PLN02954 | 224 | phosphoserine phosphatase | 89.77 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 89.46 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 89.09 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 88.92 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 88.61 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 88.33 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 87.8 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 87.11 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 87.09 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 87.0 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 86.73 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 86.37 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 86.32 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 85.51 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 84.91 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 84.88 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 84.81 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 84.61 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 84.54 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 83.97 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 83.6 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 82.98 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 82.39 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 81.88 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 81.6 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 80.84 | |
| KOG3120|consensus | 256 | 80.46 |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-119 Score=1071.97 Aligned_cols=630 Identities=28% Similarity=0.443 Sum_probs=533.1
Q ss_pred ccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCc-----ccc
Q psy2719 106 EITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDR-----AVF 180 (808)
Q Consensus 106 ~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~-----~~~ 180 (808)
+.+++||||+|... +++++.+. ....+.+|+|+||||+++++++||+||||++|||+|||+++. ..|
T Consensus 104 ~~~~~wvG~~~~~~-------~~~~~~~~-~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~f 175 (854)
T PLN02205 104 EIEVIYVGCLKEEI-------HLNEQEEV-SQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRF 175 (854)
T ss_pred cCceEEEEecCCCC-------CchhhhhH-HHHHhcCceEEEeeCCHHHHHHHHHhhhhccccchhccCCCCCccccccc
Confidence 36799999999632 22222111 123355799999999999999999999999999999998643 379
Q ss_pred CHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc--------------------
Q psy2719 181 NAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA-------------------- 240 (808)
Q Consensus 181 ~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~-------------------- 240 (808)
+.++|++|++||++||++|++.+++ .+|+|||||||||++|.+||++.
T Consensus 176 ~~~~w~~Y~~vN~~FA~~v~~~~~~------------~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr 243 (854)
T PLN02205 176 NRSLWQAYVSVNKIFADRIMEVINP------------EDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK 243 (854)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCC------------CCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHh
Confidence 9999999999999999999998852 26999999999999999999986
Q ss_pred --------------CCEEEeccHHHHHHHHHHHHHHhCceeecC--CeEEEEcCeEEEEEEeecCcCccccchhhcCc--
Q psy2719 241 --------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRN--NMLVELAGRTVHVKALPIGIPFERFVQLAENA-- 302 (808)
Q Consensus 241 --------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~--~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~-- 302 (808)
||+|||||++|+|||++||+|++|+++... .+.+.|+||.++|.++|+|||++.|.......
T Consensus 244 ~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~ 323 (854)
T PLN02205 244 TLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPET 323 (854)
T ss_pred hCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhH
Confidence 999999999999999999999999877543 24678999999999999999999997654321
Q ss_pred ----hhhhhc-C--CCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHH
Q psy2719 303 ----PENLKD-E--NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVG 375 (808)
Q Consensus 303 ----~~~~~~-~--~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~ 375 (808)
.+++++ . ++++|++|||+|+.|||.++|+||++||++||++++|++||||+.|+|+++++|++++.+++++|+
T Consensus 324 ~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~ 403 (854)
T PLN02205 324 EAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVK 403 (854)
T ss_pred HHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHH
Confidence 122222 2 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccC---------------CCceEEE
Q psy2719 376 RINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIR---------------EPGVLIL 440 (808)
Q Consensus 376 ~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~---------------~~g~vVl 440 (808)
+||++||+.+|.||+|+++.++++|+.|||++|||+++||+|||||||++||+||+.+ ++|++|+
T Consensus 404 rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiL 483 (854)
T PLN02205 404 RINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVV 483 (854)
T ss_pred HHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEe
Confidence 9999999999999999999999999999999999999999999999999999999974 4799999
Q ss_pred cCCCCCccccCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcccccCCCC----
Q psy2719 441 SPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSD---- 516 (808)
Q Consensus 441 S~~~G~~~~l~~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~---- 516 (808)
|||+||+++|.+|++|||||++++|+||.+||+||.+||+.|+++++++|.+||+.+|+++||.+|+++++.+...
T Consensus 484 SEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~ 563 (854)
T PLN02205 484 SEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRCWG 563 (854)
T ss_pred eeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999886543211
Q ss_pred -Cccchhcc------cCchhhHHHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCcccccc
Q psy2719 517 -PLSAKTLQ------LTLDDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIIS 589 (808)
Q Consensus 517 -~~~~~~~~------~~~~~~~~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~s 589 (808)
+.+..++. +...+++.++++|++ +++|+|++||||||++.... ...++++++++|++|++
T Consensus 564 ~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~-~~~rlI~LDyDGTLlp~~~~--~~~p~~~~~~~L~~L~~---------- 630 (854)
T PLN02205 564 IGFGLSFRVVALDPNFRKLSMEHIVSAYKR-TTTRAILLDYDGTLMPQASI--DKSPSSKSIDILNTLCR---------- 630 (854)
T ss_pred cccccccccccccccccccCHHHHHHHHHh-hcCeEEEEecCCcccCCccc--cCCCCHHHHHHHHHHHh----------
Confidence 11111222 112255678899976 67899999999999986532 34556666666666544
Q ss_pred ccccccccCCCCcccchHHHHHHHHHHhCCCCCeEEEEeCCChhhHHHhcCc-cceEEEcccceeEecCCCceeecC---
Q psy2719 590 GRTLENLRHHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMVNI-EKVTYAGSHGLEILHPDGTKFVHP--- 665 (808)
Q Consensus 590 gr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~~-~~~~li~~nG~~i~~~~~~~~~~~--- 665 (808)
+||+.|+|+|||++..|+++|+. ++++++|+||++++.+++..|...
T Consensus 631 -----------------------------d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~ 681 (854)
T PLN02205 631 -----------------------------DKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPV 681 (854)
T ss_pred -----------------------------cCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchh
Confidence 47999999999999999999975 568999999999998776556432
Q ss_pred CChhHHHHHHHHHHHHHhhccCCCcEEEecCcEEEEEcCcCChhhHH----HHHHHHHHHHHhcCeeEEccCeEEEEeCC
Q psy2719 666 VPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETPIERRE----YIIDRASQIFLEAGFEPHNALMAIEAKPP 741 (808)
Q Consensus 666 ~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~g~~~vEv~p~ 741 (808)
.+..|++.++.+++.|.++ ++|+++|.|+.++.||||.+|+++.. ++...+.+.+.+.++.+.+|++++||+|+
T Consensus 682 ~~~~w~~~v~~i~~~y~er--tpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~ 759 (854)
T PLN02205 682 ADCSWKQIAEPVMQLYTET--TDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQ 759 (854)
T ss_pred hhHHHHHHHHHHHHHHhcC--CCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeC
Confidence 3456998899999999987 99999999999999999999887643 45555555555556778899999999998
Q ss_pred CCCCHHHHHHHHHHH--hcCCCCCcceeEEEEe----CHHHHHhccCC-----------ccEEEeCCCCccccccccccC
Q psy2719 742 VKWDQGRASIHILRT--MYGVDWSERVRIIYAG----NEDAMLALQGI-----------ACTFRVDSSPTVKSSWKQGSN 804 (808)
Q Consensus 742 ~~v~KG~av~~ll~~--~~~i~~~~~~~via~G----D~~Mf~~~~~~-----------~~~vav~~~~~vk~~A~~~~~ 804 (808)
++|||.|++.|+++ .+|++.+ +++||| |++||++++.. +++|.||..+ +.|+|.++
T Consensus 760 -gvnKG~Al~~Ll~~~~~~g~~~d---~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~---S~A~y~L~ 832 (854)
T PLN02205 760 -GVSKGLVAKRLLSIMQERGMLPD---FVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKP---SKAKYYLD 832 (854)
T ss_pred -CCCHHHHHHHHHHHHHhcCCCcc---cEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCC---ccCeEecC
Confidence 99999999999863 2577654 899999 99999999621 3678898643 88999887
Q ss_pred cC
Q psy2719 805 HT 806 (808)
Q Consensus 805 ~~ 806 (808)
+.
T Consensus 833 d~ 834 (854)
T PLN02205 833 DT 834 (854)
T ss_pred CH
Confidence 64
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-118 Score=1054.42 Aligned_cols=617 Identities=31% Similarity=0.508 Sum_probs=519.0
Q ss_pred ccccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCC------
Q psy2719 102 GVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMP------ 175 (808)
Q Consensus 102 g~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~------ 175 (808)
++ ++.+++||||+|..... ++++. .....+.+++|+||||+++++++||+||||++|||+|||++
T Consensus 130 ~~-~~~~~~WVGw~g~~~~~------~~~~~--~~~~~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~ 200 (934)
T PLN03064 130 GV-KEFEARWIGWAGVNVPD------EVGQK--ALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDR 200 (934)
T ss_pred cc-ccCCeEEEeeCCCCCCC------cchhH--HHHHHhccCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccc
Confidence 44 56789999999974311 11111 12244567999999999999999999999999999999973
Q ss_pred -CccccCHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc--------------
Q psy2719 176 -DRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA-------------- 240 (808)
Q Consensus 176 -~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~-------------- 240 (808)
+...|+.++|++|++||++||++|++.++ ++|+|||||||||++|+|||++.
T Consensus 201 ~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~-------------~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFP 267 (934)
T PLN03064 201 LATTRSFQSQFAAYKKANQMFADVVNEHYE-------------EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFP 267 (934)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHhcC-------------CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCC
Confidence 33458889999999999999999999885 48999999999999999999986
Q ss_pred --------------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhc
Q psy2719 241 --------------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAE 300 (808)
Q Consensus 241 --------------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~ 300 (808)
||+|||||++|++||+++|.|+++.+..... +.++||.++|.++|+|||++.|.....
T Consensus 268 s~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~--v~~~Gr~v~V~~~PiGID~~~f~~~~~ 345 (934)
T PLN03064 268 SSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEG--VEDQGRLTRVAAFPIGIDSDRFIRALE 345 (934)
T ss_pred ChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCe--EEECCEEEEEEEEeCEEcHHHHHHHhc
Confidence 9999999999999999999999998766543 788999999999999999999987544
Q ss_pred Cc------hhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHH
Q psy2719 301 NA------PENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQL 373 (808)
Q Consensus 301 ~~------~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~l 373 (808)
.. ..++.. .++++|++|||||+.|||.++|+||++||++||+++++++||||+.|+|+++++|++++.++.++
T Consensus 346 ~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~ 425 (934)
T PLN03064 346 TPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEI 425 (934)
T ss_pred ChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHH
Confidence 31 122223 78899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-c
Q psy2719 374 VGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-E 452 (808)
Q Consensus 374 v~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-~ 452 (808)
|++||++||+.+|.||+|+...++++++.+||++|||||+||++||||||++||||||..++|++|+|||+|++++|. +
T Consensus 426 V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L~~~ 505 (934)
T PLN03064 426 VGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSLGAG 505 (934)
T ss_pred HHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHhCCc
Confidence 999999999999999999999999999999999999999999999999999999999988899999999999999994 7
Q ss_pred eEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcccccCCCCCccchhcccCchhhHH
Q psy2719 453 ALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQLTLDDFDL 532 (808)
Q Consensus 453 ~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (808)
|++|||||++++|+||.++|+|+++||++|+++++++|.+||+.+|+++|+.+|.+....+..... ...+ ..+.+.
T Consensus 506 AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~~~~~~~~--~~~~--~l~~~~ 581 (934)
T PLN03064 506 AILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTR--QVPP--QLPPED 581 (934)
T ss_pred eEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhhhhcccc--ccCC--CCCHHH
Confidence 999999999999999999999999999999999999999999999999999999987544322111 1111 235677
Q ss_pred HHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHH
Q psy2719 533 YLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRV 612 (808)
Q Consensus 533 ~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~ 612 (808)
++++|.+ +++|+|||||||||+++.++|+... .. +.. ....+++++++.
T Consensus 582 ~~~~y~~-a~~RLlfLDyDGTLap~~~~P~~~~--~~----~~~------------------------~~a~p~p~l~~~ 630 (934)
T PLN03064 582 AIQRYLQ-SNNRLLILGFNATLTEPVDTPGRRG--DQ----IKE------------------------MELRLHPELKEP 630 (934)
T ss_pred HHHHHHh-ccceEEEEecCceeccCCCCccccc--cc----ccc------------------------cccCCCHHHHHH
Confidence 8899976 5679999999999999876654110 00 000 012345566777
Q ss_pred HHHHhCCCCCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCceee----cCCChhHHHHHHHHHHHHHhhccCC
Q psy2719 613 LERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFV----HPVPKEYAEKLRQLIKALQDEVCHD 688 (808)
Q Consensus 613 l~~l~~~pg~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~----~~~~~~~~~~v~~i~~~~~~~~~~~ 688 (808)
|++||+||++.|+|+|||+...|+++|+..+++++|+||++++.+++ .|. ...+.+|++.+..++++|.++ ++
T Consensus 631 L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~-~w~~~~~~~~~~~W~~~v~~ile~~~eR--tP 707 (934)
T PLN03064 631 LRALCSDPKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKG-EWMTTMPEHLNMDWVDSVKHVFEYFTER--TP 707 (934)
T ss_pred HHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCC-cceeccccccchHHHHHHHHHHHHHHhc--CC
Confidence 77778889999999999999999999997789999999999987643 343 234568999999999999998 99
Q ss_pred CcEEEecCcEEEEEcCcCChhhHHHHHHHHHHHH-----HhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCC--
Q psy2719 689 GAWIENKGVLLTFHYRETPIERREYIIDRASQIF-----LEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVD-- 761 (808)
Q Consensus 689 g~~ie~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~-- 761 (808)
|++||.|++++.||||.+|+++.+....++.+.+ .+.++.+..|+++|||+|. ++|||.|++.|+++.-.-.
T Consensus 708 GS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~-gvnKG~Av~~ll~~~~~~~~~ 786 (934)
T PLN03064 708 RSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPV-GVTKGAAIDRILGEIVHSKSM 786 (934)
T ss_pred CcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcC-CCCHHHHHHHHHHhhhhcccc
Confidence 9999999999999999998877543222222222 2346889999999999998 9999999999998621000
Q ss_pred CCcceeEEEEe-----CHHHHHhcc
Q psy2719 762 WSERVRIIYAG-----NEDAMLALQ 781 (808)
Q Consensus 762 ~~~~~~via~G-----D~~Mf~~~~ 781 (808)
....++|+|+| ||+||+++.
T Consensus 787 ~~~~DFvlc~GDd~~~DEdmF~~l~ 811 (934)
T PLN03064 787 TTPIDYVLCIGHFLGKDEDIYTFFE 811 (934)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHh
Confidence 00123899999 799999985
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-113 Score=1022.59 Aligned_cols=627 Identities=30% Similarity=0.471 Sum_probs=524.2
Q ss_pred cccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCC-------Cc
Q psy2719 105 LEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMP-------DR 177 (808)
Q Consensus 105 ~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~-------~~ 177 (808)
.+.+|+||||+|..... ++++. .....+.+++|+|||| ++++++||+||||++|||+|||++ +.
T Consensus 49 ~~~~~~Wvgw~g~~~~~------~~~~~--~~~~~~~~~~~~pv~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~ 119 (797)
T PLN03063 49 KEFETKWIGWPGVDVHD------EIGKA--ALTESLAEKGCIPVFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDA 119 (797)
T ss_pred HhcCceEEEeCCCcCCc------ccchh--HHHHHhhcCCeEEeeh-HHHHHHHHHHHHhhhcchhhcCcCCCccccccc
Confidence 45689999999974211 11111 1123456789999999 999999999999999999999982 23
Q ss_pred cccCHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc-----------------
Q psy2719 178 AVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA----------------- 240 (808)
Q Consensus 178 ~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~----------------- 240 (808)
..+..++|++|++||++||++|++.++ ++|+|||||||||++|+|||++.
T Consensus 120 ~~~~~~~w~~Y~~vN~~FA~~i~~~~~-------------~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e 186 (797)
T PLN03063 120 TRTFESQYDAYKKANRMFLDVVKENYE-------------EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSE 186 (797)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhcC-------------CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHH
Confidence 345678999999999999999999885 48999999999999999999986
Q ss_pred -----------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcCc-
Q psy2719 241 -----------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENA- 302 (808)
Q Consensus 241 -----------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~- 302 (808)
||+|||||++|++||+++|+++++++..... +.++|+.++|.++|+|||++.|.+.....
T Consensus 187 ~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~--i~~~gr~~~I~viP~GID~~~f~~~~~~~~ 264 (797)
T PLN03063 187 IYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEG--VVDQGKVTRVAVFPIGIDPERFINTCELPE 264 (797)
T ss_pred HHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCc--eEECCeEEEEEEEecccCHHHHHHHhcChh
Confidence 9999999999999999999999998766554 67899999999999999999997653321
Q ss_pred --h---hhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHH
Q psy2719 303 --P---ENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGR 376 (808)
Q Consensus 303 --~---~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~ 376 (808)
. .+++. .++++|++||||++.||++.+|+||++|++++|+++++++|+|++.|+++++++|+++++++++++++
T Consensus 265 ~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~ 344 (797)
T PLN03063 265 VKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGR 344 (797)
T ss_pred HHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHH
Confidence 1 12223 67899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-ceEE
Q psy2719 377 INGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-EALL 455 (808)
Q Consensus 377 in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-~~ll 455 (808)
||++||+.+|.||+++.+.++++++.++|++|||||+||++||||||++||||||.+.+|++|+||++|+++.+. +|++
T Consensus 345 In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l~~~all 424 (797)
T PLN03063 345 INGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSLGAGALL 424 (797)
T ss_pred hhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhhcCCeEE
Confidence 999999999999999999999999999999999999999999999999999999998899999999999999995 7999
Q ss_pred ECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcccccCCCCCccchhcccCchhhHHHHh
Q psy2719 456 VNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQLTLDDFDLYLN 535 (808)
Q Consensus 456 vnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (808)
|||+|++++|+||.++|+|+++||++|++++++++.++|+.+|+++|+++|.++++.+..... ......+.+.++.
T Consensus 425 VnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~----~~~~~l~~~~~~~ 500 (797)
T PLN03063 425 VNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTR----NIPLELPEQDVIQ 500 (797)
T ss_pred ECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhccc----CCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998665432211 1111225677889
Q ss_pred hhhcCCCceEEEEecccccccCCCCC---CccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHH
Q psy2719 536 NYVDGNCKLSLILDYDGTLTPLTSHP---DLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRV 612 (808)
Q Consensus 536 ~y~~~~~~rli~~D~DGTLl~~~~~~---~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~ 612 (808)
+|.+ +++|+|||||||||++..+.+ ....++++++++|+
T Consensus 501 ~y~~-a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~------------------------------------- 542 (797)
T PLN03063 501 QYSK-SNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLK------------------------------------- 542 (797)
T ss_pred HHHh-ccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHH-------------------------------------
Confidence 9976 667999999999999875532 33445555555554
Q ss_pred HHHHhCCCCCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCceeec----CCChhHHHHHHHHHHHHHhhccCC
Q psy2719 613 LERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVH----PVPKEYAEKLRQLIKALQDEVCHD 688 (808)
Q Consensus 613 l~~l~~~pg~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~----~~~~~~~~~v~~i~~~~~~~~~~~ 688 (808)
+||++|++.|+|+|||+...|+++++..+++++|+||++++.+++ .|.. .++.+|++.+..++++|.++ ++
T Consensus 543 --~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~aeHG~~~r~~~~-~w~~~~~~~~~~~w~~~v~~~l~~~~~r--tp 617 (797)
T PLN03063 543 --ALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENGMFLRHTSG-EWVTTMPEHMNLDWVDGVKNVFKYFTDR--TP 617 (797)
T ss_pred --HHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEEEeCCEEEecCCC-ceeeccccccChhHHHHHHHHHHHHHHh--CC
Confidence 555558999999999999999999997789999999999986543 4532 33567999999999999998 99
Q ss_pred CcEEEecCcEEEEEcCcCChhhHHHHHHHH-HHHH----HhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhc--CCC
Q psy2719 689 GAWIENKGVLLTFHYRETPIERREYIIDRA-SQIF----LEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMY--GVD 761 (808)
Q Consensus 689 g~~ie~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~--~i~ 761 (808)
|+++|.|++++.||||.+|+++......++ ..+. .+.++.+..|++++||+|+ ++|||.|++.|+++.. +..
T Consensus 618 Gs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~-gvnKG~Av~~ll~~~~~~~~~ 696 (797)
T PLN03063 618 RSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAI-GVTKGAAIGRILGEIVHNKSM 696 (797)
T ss_pred CcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcC-CCChHHHHHHHHHHhhhcccc
Confidence 999999999999999999887753222222 2221 2346889999999999998 9999999999998621 100
Q ss_pred CCcceeEEEEe-----CHHHHHhccCCc------------------------------cEEEeCCCCccccccccccCcC
Q psy2719 762 WSERVRIIYAG-----NEDAMLALQGIA------------------------------CTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 762 ~~~~~~via~G-----D~~Mf~~~~~~~------------------------------~~vav~~~~~vk~~A~~~~~~~ 806 (808)
....++|+|+| ||+||+++...+ ++++||.. .+.|+|+++++
T Consensus 697 ~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~---~s~A~y~l~~~ 773 (797)
T PLN03063 697 TTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQA---RTKARYVLDSS 773 (797)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCC---CccCeecCCCH
Confidence 00123899999 899999987433 45778864 48999998764
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-110 Score=1002.07 Aligned_cols=627 Identities=37% Similarity=0.648 Sum_probs=540.5
Q ss_pred ccccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCccccC
Q psy2719 102 GVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVFN 181 (808)
Q Consensus 102 g~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~ 181 (808)
++..+.+|+||||+|..... .+++++. .....+.+|+|+||||+++++++||+||||++|||+|||+++...|+
T Consensus 36 ~~~~~~~~~wvg~~g~~~~~----~~~~~~~--~~~~~~~~~~~~~v~l~~~~~~~~y~gf~n~~lWp~~H~~~~~~~~~ 109 (726)
T PRK14501 36 SFHERGGGLWVGWPGLDLEE----ESEEQRA--RIEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFE 109 (726)
T ss_pred HHhhcCCeEEEEeCCCCccc----cchhhhh--hhhhhccCceEEEEeCCHHHHHHHHHHhhhccccchhcccCcccCcC
Confidence 44456789999999974321 1111111 11244567999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc---------------------
Q psy2719 182 AETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA--------------------- 240 (808)
Q Consensus 182 ~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~--------------------- 240 (808)
+++|++|++||++||++|++.++ ++|+||||||||+++|++||++.
T Consensus 110 ~~~w~~Y~~vN~~fA~~~~~~~~-------------~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~ 176 (726)
T PRK14501 110 DRFWESYERVNQRFAEAIAAIAR-------------PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRL 176 (726)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-------------CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChHHHhh
Confidence 99999999999999999999875 48999999999999999999886
Q ss_pred -------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcCch----
Q psy2719 241 -------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAP---- 303 (808)
Q Consensus 241 -------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~~---- 303 (808)
+|+||||+++|++||+++|.++++.++... .+.++||.++|.++|+|||++.|.+......
T Consensus 177 lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~--~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~ 254 (726)
T PRK14501 177 LPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG--EIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEE 254 (726)
T ss_pred CCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC--eEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHH
Confidence 999999999999999999999999766543 4788999999999999999999987643211
Q ss_pred --hhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcc
Q psy2719 304 --ENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGR 380 (808)
Q Consensus 304 --~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~ 380 (808)
.+++. .++++|++|||+++.||+..+|+||++|++++|+++++++|+|++.|+|.+.++|+++++++++++++||++
T Consensus 255 ~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~ 334 (726)
T PRK14501 255 IRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGE 334 (726)
T ss_pred HHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhh
Confidence 12223 678899999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred CCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccCceEEECCCC
Q psy2719 381 FSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYE 460 (808)
Q Consensus 381 ~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~~~llvnP~d 460 (808)
||+.+|.||+++.+.+++++++++|++||+||+||++||||||++|||||+.+.+|++|+|+++|+++++.+|++|||+|
T Consensus 335 ~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~~~llv~P~d 414 (726)
T PRK14501 335 FGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELAEALLVNPND 414 (726)
T ss_pred cCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhCcCeEECCCC
Confidence 99999999999999999999999999999999999999999999999999998889999999999999998999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcccccCCCCCccchhcccCchhhHHHHhhhhcC
Q psy2719 461 IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQLTLDDFDLYLNNYVDG 540 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 540 (808)
++++|++|.++|+|+.+|++.|++++++++.++|+.+|+++|++.+.++++.+.... +..++..+++.++.+|..
T Consensus 415 ~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~- 489 (726)
T PRK14501 415 IEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFA----SKPITPAAAEEIIARYRA- 489 (726)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhccc----cccCCccCHHHHHHHHHh-
Confidence 999999999999999999999999999999999999999999999999865543221 122233467788899975
Q ss_pred CCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCC
Q psy2719 541 NCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMP 620 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~p 620 (808)
+++|||+|||||||++...+|+...++++++++|++|+++ |
T Consensus 490 ~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d---------------------------------------~ 530 (726)
T PRK14501 490 ASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAAD---------------------------------------P 530 (726)
T ss_pred ccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcC---------------------------------------C
Confidence 6789999999999999876666677888888888887775 6
Q ss_pred CCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCceeec--CCChhHHHHHHHHHHHHHhhccCCCcEEEecCcE
Q psy2719 621 DVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVH--PVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVL 698 (808)
Q Consensus 621 g~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~--~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~ 698 (808)
|+.|+|+|||++..++++++..++++|++||++++.+++. |.. ..+.+|++.++++++.+.++ ++|+++|.|+.+
T Consensus 531 g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~-w~~~~~~~~~w~~~v~~il~~~~~~--~~gs~ie~k~~~ 607 (726)
T PRK14501 531 NTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGE-WQLLEPVATEWKDAVRPILEEFVDR--TPGSFIEEKEAS 607 (726)
T ss_pred CCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCc-eEECCCcchhHHHHHHHHHHHHHhc--CCCcEEEEcceE
Confidence 8999999999999999999866789999999999876543 332 23567999999999999987 899999999999
Q ss_pred EEEEcCcCChhhHHH----HHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe--
Q psy2719 699 LTFHYRETPIERREY----IIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG-- 772 (808)
Q Consensus 699 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G-- 772 (808)
++|||+.+++++... +...+...+...++.+.+|+.++||+|+ ++|||.|++.+++. . +.+ +++|||
T Consensus 608 l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~-~vnKG~al~~ll~~-~--~~d---~vl~~GD~ 680 (726)
T PRK14501 608 LAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPA-GVNKGRAVRRLLEA-G--PYD---FVLAIGDD 680 (726)
T ss_pred EEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEEC-CCCHHHHHHHHHhc-C--CCC---EEEEECCC
Confidence 999999988766543 3333444444456778889999999998 99999999999983 3 332 899999
Q ss_pred --CHHHHHhccCCccEEEeCCCCccccccccccCcC
Q psy2719 773 --NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 773 --D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~~ 806 (808)
|++||+.++..+++|+||+. ++.|+|+++++
T Consensus 681 ~nDe~Mf~~~~~~~~~v~vG~~---~s~A~~~l~~~ 713 (726)
T PRK14501 681 TTDEDMFRALPETAITVKVGPG---ESRARYRLPSQ 713 (726)
T ss_pred CChHHHHHhcccCceEEEECCC---CCcceEeCCCH
Confidence 99999999766788999985 58999999875
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-92 Score=780.08 Aligned_cols=384 Identities=36% Similarity=0.647 Sum_probs=348.6
Q ss_pred cccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCccccCH
Q psy2719 103 VTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVFNA 182 (808)
Q Consensus 103 ~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~ 182 (808)
+.++.+|+||||+|.... ++++ . .......++|.||+|+++++++||+||||++|||+|||+++...|+.
T Consensus 31 ~l~~~~g~WvGW~g~~~~-------~~~~--~-~~~~~~~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfHy~~~~~~~~~ 100 (474)
T PRK10117 31 ALKAAGGLWFGWSGETGN-------EDQP--L-KKVKKGNITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQR 100 (474)
T ss_pred HHHhcCceEEEecCCCCC-------Cccc--c-hhhhcCCceEEEecCCHHHHHHHHhhhhhcchhhhhCCCCCccCcCH
Confidence 345679999999996421 1110 0 00111247899999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc----------------------
Q psy2719 183 ETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA---------------------- 240 (808)
Q Consensus 183 ~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~---------------------- 240 (808)
++|++|++||++||++|++.++ ++|+||||||||+++|++||+++
T Consensus 101 ~~w~~Y~~VN~~FA~~v~~~~~-------------~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~eifr~L 167 (474)
T PRK10117 101 PAWEGYLRVNALLADKLLPLLK-------------DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNAL 167 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-------------CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChHHHhhC
Confidence 9999999999999999999875 48999999999999999999986
Q ss_pred ------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcCc-----h
Q psy2719 241 ------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENA-----P 303 (808)
Q Consensus 241 ------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~-----~ 303 (808)
+|+|||||++|++||+++|+++++++...+. .+.++||.++|.++|+|||++.|...+... .
T Consensus 168 P~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~-~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~ 246 (474)
T PRK10117 168 PPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGK-SHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLA 246 (474)
T ss_pred CChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCC-eEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHH
Confidence 9999999999999999999999998765433 467889999999999999999997754321 1
Q ss_pred hhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCC
Q psy2719 304 ENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFS 382 (808)
Q Consensus 304 ~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g 382 (808)
.+++. +++++|++|||+||+|||.++|+||++||++||++++|++|+||+.|||+++++|++++.+|+++|++||++||
T Consensus 247 ~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg 326 (474)
T PRK10117 247 QLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYG 326 (474)
T ss_pred HHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccC
Confidence 12223 67999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhcc-CCCceEEEcCCCCCccccCceEEECCCCH
Q psy2719 383 KPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQI-REPGVLILSPFAGAGGMMHEALLVNPYEI 461 (808)
Q Consensus 383 ~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~-~~~g~vVlS~~~G~~~~l~~~llvnP~d~ 461 (808)
+.+|.||+|+++.++++++.++|++|||+++||++||||||++||+|||. +.+|++|+|||+|++++|.+|++|||||+
T Consensus 327 ~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~~AllVNP~d~ 406 (474)
T PRK10117 327 QLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDR 406 (474)
T ss_pred CCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchHHHhCCCeEECCCCH
Confidence 99999999999999999999999999999999999999999999999998 45899999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHccc
Q psy2719 462 DAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALD 510 (808)
Q Consensus 462 ~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 510 (808)
+++|+||.+||+||.+||++|++.++++|.++|+.+|+++||.+|....
T Consensus 407 ~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 407 DEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999998864
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-89 Score=771.81 Aligned_cols=385 Identities=33% Similarity=0.617 Sum_probs=346.1
Q ss_pred cccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCccccCHHh
Q psy2719 105 LEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVFNAET 184 (808)
Q Consensus 105 ~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~~~ 184 (808)
+..+|+||||+|....+. + +... .. ......+++|.||+|+++++++||+||||++|||+|||+++...|+.++
T Consensus 38 ~~~~g~Wvgw~g~~~~~~-~--~~~~--~~-~~~~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~ 111 (487)
T TIGR02398 38 DGRAGTWVAWAEHDENSG-E--TFDS--HM-TVPAEYKLTAARIPLSKEQVDIFYHITSKEAFWPILHTFPERFQFREDD 111 (487)
T ss_pred cccceEEEeeCCCCcccc-c--cccc--cc-ccccCCceeEEEEeCCHHHHHHHHhhhhhccccccccCCccccCcCHHH
Confidence 346799999999632110 0 0000 00 0122346799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc------------------------
Q psy2719 185 WKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA------------------------ 240 (808)
Q Consensus 185 w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~------------------------ 240 (808)
|++|++||++||++|++.++ ++|+||||||||+++|++||++.
T Consensus 112 w~~Y~~vN~~FA~~i~~~~~-------------~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~ 178 (487)
T TIGR02398 112 WQVFLKVNRAFAEAACLEAA-------------EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPW 178 (487)
T ss_pred HHHHHHHHHHHHHHHHHhcC-------------CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChHHHhhCCc
Confidence 99999999999999998875 48999999999999999999986
Q ss_pred ----------CCEEEeccHHHHHHHHHHHHHHhCceeecC-------------------CeEEEEcCeEEEEEEeecCcC
Q psy2719 241 ----------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRN-------------------NMLVELAGRTVHVKALPIGIP 291 (808)
Q Consensus 241 ----------~dligf~~~~~~~~fl~~~~~~l~~~~~~~-------------------~~~i~~~gr~~~v~v~p~GID 291 (808)
||+|||||++|++||+++|+++++++.... .+.+.++||.++|.++|+|||
T Consensus 179 r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID 258 (487)
T TIGR02398 179 REQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTD 258 (487)
T ss_pred hHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEec
Confidence 999999999999999999999998765332 123778999999999999999
Q ss_pred ccccchhhcCc------hhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHH
Q psy2719 292 FERFVQLAENA------PENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYK 364 (808)
Q Consensus 292 ~~~f~~~~~~~------~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~ 364 (808)
++.|.+..... ..++++ .++++|++|||+|+.|||+++|+||++||++||+++++++||||+.|+|+++++|+
T Consensus 259 ~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~ 338 (487)
T TIGR02398 259 PERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYD 338 (487)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHH
Confidence 99997754321 122333 78999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCC
Q psy2719 365 ALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFA 444 (808)
Q Consensus 365 ~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~ 444 (808)
+++++|+++|++||++||+.+|+||+++++.++++++.++|++||||++||+|||||||++||||||.+.+||||+|||+
T Consensus 339 ~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefa 418 (487)
T TIGR02398 339 ELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFA 418 (487)
T ss_pred HHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred CCccccCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 445 GAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 445 G~~~~l~~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
|+++++.+|++|||||++++|+||.+||+||.+||++|+++++++|.++|+.+|+++||.+|..
T Consensus 419 Gaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 419 GAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred cchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999965
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-88 Score=759.00 Aligned_cols=388 Identities=46% Similarity=0.841 Sum_probs=304.3
Q ss_pred ccccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCC----c
Q psy2719 102 GVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPD----R 177 (808)
Q Consensus 102 g~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~----~ 177 (808)
++.++.+|+||||+|.....+.+ .+. ........+++|+||||+++++++||+||||++|||+|||.++ .
T Consensus 40 ~l~~~~~~~WvGw~g~~~~~~~~-----~~~-~v~~~~~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~~ 113 (474)
T PF00982_consen 40 PLLKKRGGIWVGWPGVDVDEEED-----EQD-RVEPRLLDEYNCVPVFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPDL 113 (474)
T ss_dssp HHHHHH-EEEEEEEEEES-TTS--------E-EEE---ETTEEEEEEEE-HHHHHHHTTTHHHHTHHHHHTT-GG----G
T ss_pred HHHhcCCCEEEEeCCCcCccccc-----ccc-chhhhcccCceEEEEEcCHHHHHHHHHhhhhhccCccccccccccccc
Confidence 44556899999999976432110 111 1112345678999999999999999999999999999998654 6
Q ss_pred cccCHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc-----------------
Q psy2719 178 AVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA----------------- 240 (808)
Q Consensus 178 ~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~----------------- 240 (808)
..|+.++|++|++||++||++|++.++ ++|+|||||||||++|++||++.
T Consensus 114 ~~~~~~~w~~Y~~vN~~FA~~i~~~~~-------------~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e 180 (474)
T PF00982_consen 114 ARFEEEWWEAYKRVNRRFADAIAEVYR-------------PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSE 180 (474)
T ss_dssp ----HHHHHHHHHHHHHHHHHHGGG---------------TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhCc-------------CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHH
Confidence 789999999999999999999998875 49999999999999999999987
Q ss_pred -----------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcCc-
Q psy2719 241 -----------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENA- 302 (808)
Q Consensus 241 -----------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~- 302 (808)
||+||||+++|++||+++|++++++++......+.++||.++|.++|+|||++.|...+.+.
T Consensus 181 ~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~ 260 (474)
T PF00982_consen 181 IFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPE 260 (474)
T ss_dssp HHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S-
T ss_pred HHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChH
Confidence 99999999999999999999999988765532589999999999999999999997754321
Q ss_pred -----hhhhhc-CC-CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHH
Q psy2719 303 -----PENLKD-EN-LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVG 375 (808)
Q Consensus 303 -----~~~~~~-~~-~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~ 375 (808)
.+++++ ++ +++|++|||+|+.|||.++|+||++||++||+++++++|+||+.|+|+++++|++++++|+++|+
T Consensus 261 v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~ 340 (474)
T PF00982_consen 261 VQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVG 340 (474)
T ss_dssp --HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHH
Confidence 122333 56 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-ceE
Q psy2719 376 RINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-EAL 454 (808)
Q Consensus 376 ~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-~~l 454 (808)
+||++||+.+|+||+|+++.++++++.+||++|||+++||++||||||++||+|||.+++|++|+|||+|++++|. +++
T Consensus 341 ~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~~al 420 (474)
T PF00982_consen 341 RINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSEAAL 420 (474)
T ss_dssp HHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS-E
T ss_pred HHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCCccE
Confidence 9999999999999999999999999999999999999999999999999999999998899999999999999998 569
Q ss_pred EECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 455 LVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 455 lvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
+|||||++++|+||.+||+||++||+.|++.++++|.++|+.+|+++||++|++
T Consensus 421 ~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 421 LVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp EE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred EECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999974
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >KOG1050|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-84 Score=746.99 Aligned_cols=615 Identities=32% Similarity=0.504 Sum_probs=520.1
Q ss_pred ccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCC--CCcc---cc
Q psy2719 106 EITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSM--PDRA---VF 180 (808)
Q Consensus 106 ~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~--~~~~---~~ 180 (808)
+.+..||||.|.. ++++++.+. ....+...+|+||+++++...++|++||+++|||+|||+ +... .|
T Consensus 44 ~~~~~~vg~~~~~-------~~~~~~~~~-~~~~~~~~~~~pv~~~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~~~ 115 (732)
T KOG1050|consen 44 EMEVKWVGPLGDE-------LDDSEKEDV-SQELLEEFDSVPVFLDDELFDSYYNGYCKSILWPLFHYMLIPSEPAFKLF 115 (732)
T ss_pred cceeeEEeecccc-------CchhhHhHh-hhhhhhhcCceeeecCCchhhhhhhhhhhhcccceeecccCCCchhhhhh
Confidence 5568899988832 333333222 223455789999999999999999999999999999998 3322 35
Q ss_pred CHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc--------------------
Q psy2719 181 NAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA-------------------- 240 (808)
Q Consensus 181 ~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~-------------------- 240 (808)
+.+.|++|+.+|+.||+++++.++ ++|+|||||||||++|+++|+..
T Consensus 116 ~~~~w~~y~~~n~~f~d~ive~~~-------------~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpssEi~r 182 (732)
T KOG1050|consen 116 DLELWKAYVKVNQAFADKIVEVYE-------------EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSSEIYR 182 (732)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhcc-------------CCCcEEEEcchhhccchhhhcccccceEEEeccCCCChHHHHH
Confidence 678999999999999999999986 38999999999999999999874
Q ss_pred --------------CCEEEeccHHHHHHHHHHHHHHhCceeec--CCeEEEEcCeEEEEEEeecCcCccccchhhcCch-
Q psy2719 241 --------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDR--NNMLVELAGRTVHVKALPIGIPFERFVQLAENAP- 303 (808)
Q Consensus 241 --------------~dligf~~~~~~~~fl~~~~~~l~~~~~~--~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~~- 303 (808)
+|+||||+.+|+|||+++|.|+++.+... ....+.+.||.+.|.++|+|||+.+|........
T Consensus 183 ~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~~~~ 262 (732)
T KOG1050|consen 183 CLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLELPYV 262 (732)
T ss_pred hcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccchhH
Confidence 89999999999999999999999977652 2334788999999999999999999977543311
Q ss_pred -----hhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHH
Q psy2719 304 -----ENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRI 377 (808)
Q Consensus 304 -----~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~i 377 (808)
++... +++++|++|||+|+.||+..++.||++++++||+++++|+|+|+..|+++++++|++++.++..++.+|
T Consensus 263 ~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rI 342 (732)
T KOG1050|consen 263 GSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRI 342 (732)
T ss_pred HHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhh
Confidence 22222 689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc-CceEEE
Q psy2719 378 NGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM-HEALLV 456 (808)
Q Consensus 378 n~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l-~~~llv 456 (808)
|.+||+..+.||+++...++..++.++|..||+++++|+++||||+++|+++|+..+.+++|+|+|+|+.+.+ .+++++
T Consensus 343 n~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~aivv 422 (732)
T KOG1050|consen 343 NEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDAAIVV 422 (732)
T ss_pred hhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccccCEEE
Confidence 9999999999999999999999999999999999999999999999999999998778999999999999999 579999
Q ss_pred CCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcccccCCCCCccchhcccCchhhHHHHhh
Q psy2719 457 NPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSDPLSAKTLQLTLDDFDLYLNN 536 (808)
Q Consensus 457 nP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (808)
||||.++++.+|..+|+|+++++..|+....+++..++...|+.+|++.+.+..+.+... . ...++ ...+.++..
T Consensus 423 npw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~~~~~-~--~~~~~--l~~~~~i~~ 497 (732)
T KOG1050|consen 423 NPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKVGFLG-F--RVTPL--LTAEHIVSD 497 (732)
T ss_pred CCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhhcccc-c--ccccc--cChhHhhhh
Confidence 999999999999999999999999999999999999999999999999888876655421 1 12221 133457788
Q ss_pred hhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHH
Q psy2719 537 YVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERL 616 (808)
Q Consensus 537 y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l 616 (808)
|.+ +++|+|++|||||+.+..+ ..+ .+.|+.|
T Consensus 498 y~~-s~~rli~ldyd~t~~~~~~--------~~~---------------------------------------~~~l~~L 529 (732)
T KOG1050|consen 498 YKK-SKKRLILLDYDLTLIPPRS--------IKA---------------------------------------ISILKDL 529 (732)
T ss_pred hhh-ccceEEEecccccccCCCC--------chH---------------------------------------HHHHHHH
Confidence 876 6789999999999887322 112 2346677
Q ss_pred hCCCCCeEEEEeCCChhhHHHhc-CccceEEEcccceeEecCCCceeecCC-ChhHHHHHHHHHHHHHhhccCCCcEEEe
Q psy2719 617 ANMPDVNIGIISGRTLENLMKMV-NIEKVTYAGSHGLEILHPDGTKFVHPV-PKEYAEKLRQLIKALQDEVCHDGAWIEN 694 (808)
Q Consensus 617 ~~~pg~~v~I~SGR~~~~l~~~~-~~~~~~li~~nG~~i~~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~~~~g~~ie~ 694 (808)
|+||++.|.|+|||+...+.+++ +.++++++||||++++.+++ |.... +.+|++.+++++++|.++ |+|+++|.
T Consensus 530 ~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~~~~~w~~~v~~i~~~~~er--t~GS~ie~ 605 (732)
T KOG1050|consen 530 CSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCVLDLDWKDLVKDIFQYYTER--TPGSYIER 605 (732)
T ss_pred hcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeecccccHHHHHHHHHHHHHhc--CCCceecc
Confidence 88899999999999999998877 57889999999999998876 77665 789999999999999998 99999999
Q ss_pred cCcEEEEEcCcCChhhHHHHHHHHHHHH--HhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe
Q psy2719 695 KGVLLTFHYRETPIERREYIIDRASQIF--LEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG 772 (808)
Q Consensus 695 k~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G 772 (808)
|+.++.|||+++++++++-....+.+.+ .+.++.+..|+..|||.|. |+|||.|+..++.. .. +. .++++|+|
T Consensus 606 k~~~l~~hy~~ad~~~g~~qA~el~~~l~~~~~~~~v~~g~~~Vev~~~-gvsk~~~~~~~~~~-~~-~~--~df~~c~g 680 (732)
T KOG1050|consen 606 KETALVWHYRNADPEFGELQAKELLEHLESKNEPVEVVRGKHIVEVRPQ-GVSKGLAAERILSE-MV-KE--PDFVLCIG 680 (732)
T ss_pred cCceEEEeeeccCcchhHHHHHHHHHHhcccCCCeEEEecCceEEEccc-ccchHHHHHHHHHh-cC-CC--cceEEEec
Confidence 9999999999999888753333333333 2457889999999999997 99999999999986 55 22 23899999
Q ss_pred ----CHHHHHhccCCc--------cEEEeCCCCccccccccccCcC
Q psy2719 773 ----NEDAMLALQGIA--------CTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 773 ----D~~Mf~~~~~~~--------~~vav~~~~~vk~~A~~~~~~~ 806 (808)
|++||+.+...- ++++||. -.+.|+|.+.++
T Consensus 681 ~d~tDed~~~~~~~~~~~~~~~~~F~~~~g~---~~t~a~~~~~~~ 723 (732)
T KOG1050|consen 681 DDRTDEDMFEFISKAKDPEKVEEIFACTVGQ---KPSKAKYFLDDT 723 (732)
T ss_pred CCCChHHHHHHHhhccCCcccceEEEEEcCC---CCcccccccCCh
Confidence 999999886321 3344444 348899887653
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-85 Score=719.14 Aligned_cols=385 Identities=43% Similarity=0.762 Sum_probs=346.5
Q ss_pred cccccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCcccc
Q psy2719 101 NGVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVF 180 (808)
Q Consensus 101 ~g~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~ 180 (808)
.+.....+|+||||+|.... +++.++.. ......+...||.++.+++++||++|||++|||+|||+.+...|
T Consensus 51 ~~~~~~~~~~W~gw~G~~~~--~~~~~~~~------~~~~~~~~~~~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~~~ 122 (486)
T COG0380 51 KPLLRVDGGTWIGWSGTTGP--TDESSDDL------KERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDVAY 122 (486)
T ss_pred chhhHhhcceEEecCceecc--ccccchhh------hhccccceEEEEecCHHHHHHHHHHhhHhhhcceeeeecCcccc
Confidence 34555688999999998652 11111111 11222678999999999999999999999999999999988999
Q ss_pred CHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc--------------------
Q psy2719 181 NAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA-------------------- 240 (808)
Q Consensus 181 ~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~-------------------- 240 (808)
+.++|+.|++||++||++|++.++ ++|+||||||||+|+|+|||++.
T Consensus 123 ~~~~w~~Y~~vN~~FAd~i~~~~~-------------~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssEvfr 189 (486)
T COG0380 123 ERNWWDAYVKVNRKFADKIVEIYE-------------PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEVFR 189 (486)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcC-------------CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHHHHh
Confidence 999999999999999999999986 49999999999999999999988
Q ss_pred --------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEE---cCeEEEEEEeecCcCccccchhhcCc-
Q psy2719 241 --------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVEL---AGRTVHVKALPIGIPFERFVQLAENA- 302 (808)
Q Consensus 241 --------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~---~gr~~~v~v~p~GID~~~f~~~~~~~- 302 (808)
||+||||+.+|++||+++|+++++..... + +.+ +|+.+++.++|+|||+..|.......
T Consensus 190 ~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~-~--~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~ 266 (486)
T COG0380 190 CLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDA-D--IRFNGADGRIVKVGAFPIGIDPEEFERALKSPS 266 (486)
T ss_pred hCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccc-c--ccccccCCceEEEEEEeeecCHHHHHHhhcCCc
Confidence 99999999999999999999999865222 1 333 47999999999999999997754321
Q ss_pred -----hhhhhc--CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHH
Q psy2719 303 -----PENLKD--ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVG 375 (808)
Q Consensus 303 -----~~~~~~--~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~ 375 (808)
.++++. .++++|++|||+|+.||+.++++||++||++||++++|++|+||+.|||++.++|+.++.+++++|+
T Consensus 267 v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~ 346 (486)
T COG0380 267 VQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVG 346 (486)
T ss_pred hhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHH
Confidence 122333 4499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccCceEE
Q psy2719 376 RINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALL 455 (808)
Q Consensus 376 ~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~~~ll 455 (808)
+||++||+.+|+||+|++..++++++.+||++||++++||++||||||++||+|||..++|++|+|||+|++.+|.++++
T Consensus 347 rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~Ali 426 (486)
T COG0380 347 RINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRDALI 426 (486)
T ss_pred HHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhccCEe
Confidence 99999999999999999999999999999999999999999999999999999999977999999999999999999999
Q ss_pred ECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 456 VNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 456 vnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
|||||.+++|++|.+||+|+.+||++|++.+++.|.++|+++|+++|+.+|...
T Consensus 427 VNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 427 VNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred ECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999863
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-82 Score=715.63 Aligned_cols=384 Identities=46% Similarity=0.793 Sum_probs=346.8
Q ss_pred ccccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCccccC
Q psy2719 102 GVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVFN 181 (808)
Q Consensus 102 g~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~ 181 (808)
++..+.+|+||||+|..... ++++.. .......+++|+||||+++++++||+||||++|||+|||+++...|+
T Consensus 31 ~~~~~~~~~Wvgw~g~~~~~------~~~~~~-~~~~~~~~~~~~~v~l~~~~~~~~y~gf~n~~lWPl~H~~~~~~~~~ 103 (456)
T TIGR02400 31 GALKATGGVWFGWSGKTVEE------DEGEPF-LRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLIRYD 103 (456)
T ss_pred HHHhccCcEEEEeCCCCCCc------cchhhh-HHHhhccCceEEEEECCHHHHHHHHHHhhhhhcchhhcccccccccC
Confidence 34456789999999974311 111000 11122346899999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc---------------------
Q psy2719 182 AETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA--------------------- 240 (808)
Q Consensus 182 ~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~--------------------- 240 (808)
+++|++|++||++||++|++.++ ++|+||||||||+++|++||++.
T Consensus 104 ~~~w~~Y~~vN~~fA~~i~~~~~-------------~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~e~f~~ 170 (456)
T TIGR02400 104 RKAWEAYRRVNRLFAEALAPLLQ-------------PGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIYRT 170 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-------------CCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhh
Confidence 99999999999999999999875 48999999999999999999986
Q ss_pred -------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcCc-----
Q psy2719 241 -------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENA----- 302 (808)
Q Consensus 241 -------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~----- 302 (808)
||+|||||++|++||+++|+++++.+..... +.+.|+.++|.++|+|||++.|.+.....
T Consensus 171 lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~--~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~ 248 (456)
T TIGR02400 171 LPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNG--VESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKR 248 (456)
T ss_pred CCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCc--eEECCcEEEEEEecCcCCHHHHHHHhcChhHHHH
Confidence 9999999999999999999999998876654 66889999999999999999998754321
Q ss_pred -hhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcc
Q psy2719 303 -PENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGR 380 (808)
Q Consensus 303 -~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~ 380 (808)
..++++ .++++|++|||+++.||++.+|+||++|++++|+++++++|+|++.|+++++++|+++++++++++++||++
T Consensus 249 ~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~ 328 (456)
T TIGR02400 249 IAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGR 328 (456)
T ss_pred HHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhc
Confidence 112223 678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccCceEEECCCC
Q psy2719 381 FSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYE 460 (808)
Q Consensus 381 ~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~~~llvnP~d 460 (808)
||+.+|.|++++.+.+++++++++|++||+||+||++||||||++|||||+.|.+|++|+|+++|+++++.+|++|||+|
T Consensus 329 ~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~~gllVnP~d 408 (456)
T TIGR02400 329 FGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELNGALLVNPYD 408 (456)
T ss_pred cCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhCCcEEECCCC
Confidence 99999999999999999999999999999999999999999999999999998889999999999999998999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHH
Q psy2719 461 IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 507 (808)
++++|+||.++|+|+.+||++|++++++++.++|+.+|+++|+.+|.
T Consensus 409 ~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 409 IDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999885
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=652.37 Aligned_cols=384 Identities=49% Similarity=0.880 Sum_probs=344.2
Q ss_pred ccccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCccccC
Q psy2719 102 GVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVFN 181 (808)
Q Consensus 102 g~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~ 181 (808)
++.++.+++||||+|....... + .........+++|+||||+++++++||+||||++|||+|||.++...|+
T Consensus 36 ~~~~~~~~~wvg~~~~~~~~~~------~--~~~~~~~~~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H~~~~~~~~~ 107 (460)
T cd03788 36 GLLKRTGGLWVGWSGIEEDEEE------E--DEVSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFD 107 (460)
T ss_pred HHHhcCCeEEEEeCCCCCCccc------c--hhhhhhhcCCceEEEeeCCHHHHHHHHHHhhhhhcchhhcCCCCccccC
Confidence 3445568999999997532111 0 0012234567899999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc---------------------
Q psy2719 182 AETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA--------------------- 240 (808)
Q Consensus 182 ~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~--------------------- 240 (808)
.++|++|++||+.||++|++.++ ++|+||||||||+++|.++|++.
T Consensus 108 ~~~w~~Y~~vN~~fa~~i~~~~~-------------~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~e~~~~ 174 (460)
T cd03788 108 REDWEAYVRVNRKFADAIAEVLR-------------PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFRC 174 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-------------CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhh
Confidence 99999999999999999999875 48999999999999999999864
Q ss_pred -------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcCch---h
Q psy2719 241 -------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAP---E 304 (808)
Q Consensus 241 -------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~~---~ 304 (808)
+|+||||+++|+++|+++|+++++.+..... .+.++|+.+++.++|+|||++.|.+...... .
T Consensus 175 lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~-~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~ 253 (460)
T cd03788 175 LPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDG-GVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQER 253 (460)
T ss_pred CCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCc-eEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHH
Confidence 9999999999999999999999987655432 5789999999999999999999986543211 1
Q ss_pred ---hhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcc
Q psy2719 305 ---NLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGR 380 (808)
Q Consensus 305 ---~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~ 380 (808)
.+.. +++++|++|||+++.||+..+|+||++|++++|+++++++|+|+|.|+++++++++++++++++++++||.+
T Consensus 254 ~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~ 333 (460)
T cd03788 254 AAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGK 333 (460)
T ss_pred HHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhc
Confidence 1122 678999999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred CCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccCceEEECCCC
Q psy2719 381 FSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEALLVNPYE 460 (808)
Q Consensus 381 ~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~~~llvnP~d 460 (808)
||+.+|.+|+++.+.++++++.++|++||+||+||++||||||++|||||++|.+|+||+|+++|+++++.+|++|||+|
T Consensus 334 ~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~~~~g~lv~p~d 413 (460)
T cd03788 334 FGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEELSGALLVNPYD 413 (460)
T ss_pred cCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhhcCCCEEECCCC
Confidence 99989999999999999999999999999999999999999999999999999999999999999999887899999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHH
Q psy2719 461 IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 507 (808)
++++|++|.++|+|++++++.+++++++++.++|+..|+++|+.+|.
T Consensus 414 ~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l~ 460 (460)
T cd03788 414 IDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDLA 460 (460)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999873
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=343.79 Aligned_cols=435 Identities=14% Similarity=0.182 Sum_probs=277.7
Q ss_pred EEEEeecCcCccccchhhcCch-------------------hhhh---cCCCeEEEEEcCccccCChHHHHHHHHHHHHh
Q psy2719 282 HVKALPIGIPFERFVQLAENAP-------------------ENLK---DENLKVILGVDRLDYTKGLVHRIKAFERLLEK 339 (808)
Q Consensus 282 ~v~v~p~GID~~~f~~~~~~~~-------------------~~~~---~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~ 339 (808)
++.|||+|||+++|.+...... .+.+ .+++++|++|||+++.||+..+|+||..+.+.
T Consensus 428 ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l 507 (1050)
T TIGR02468 428 RMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPL 507 (1050)
T ss_pred CeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhh
Confidence 8899999999999987421100 1111 15778999999999999999999999998654
Q ss_pred CCCccCcEEEEEEEcCCCCChHHH----HHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhc----CeE
Q psy2719 340 HPEYVEKVTFLQISVPSRTDVLEY----KALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDS----AIA 411 (808)
Q Consensus 340 ~p~~~~~v~lv~ig~~~~~~~~~~----~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~A----dv~ 411 (808)
.+.. ++.+ ++|.+. +.++. .....++.+++.+.+. ...+.|.|.+++++++++|+.| |+|
T Consensus 508 ~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li~~lgL-------~g~V~FlG~v~~edvp~lYr~Ad~s~DVF 575 (1050)
T TIGR02468 508 RELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLIDKYDL-------YGQVAYPKHHKQSDVPDIYRLAAKTKGVF 575 (1050)
T ss_pred ccCC--CEEE-EEecCc--hhhhhhccchHHHHHHHHHHHHhCC-------CCeEEecCCCCHHHHHHHHHHhhhcCCee
Confidence 3221 2333 345321 11111 1234556666666543 2345677999999999999998 699
Q ss_pred EECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH
Q psy2719 412 LVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRH 488 (808)
Q Consensus 412 v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~ 488 (808)
|+||++||||++++|||||+ .|||+|+.+|..+.+. +|++|+|.|++++|++|.++|+. ++.+++...+.++
T Consensus 576 V~PS~~EgFGLvlLEAMAcG----lPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~D-pelr~~m~~~gr~ 650 (1050)
T TIGR02468 576 INPAFIEPFGLTLIEAAAHG----LPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVAD-KQLWAECRQNGLK 650 (1050)
T ss_pred eCCcccCCCCHHHHHHHHhC----CCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhC-HHHHHHHHHHHHH
Confidence 99999999999999999996 5699999988888773 59999999999999999999974 4555666667788
Q ss_pred HHhcCCHHHHHHHHHHHHHcccccCCCCC--------cc----ch---------hcccCch-------------------
Q psy2719 489 REQQLDVNHWMNSFLSSMGALDNDDDSDP--------LS----AK---------TLQLTLD------------------- 528 (808)
Q Consensus 489 ~v~~~~~~~W~~~~l~~l~~~~~~~~~~~--------~~----~~---------~~~~~~~------------------- 528 (808)
++.+|+|...++++++.+......+..-. .+ .. +..++++
T Consensus 651 ~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1050)
T TIGR02468 651 NIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPA 730 (1050)
T ss_pred HHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccccccCccccccccccchhhccccccccccccccccccccchh
Confidence 88999999999999998876533221000 00 00 0000000
Q ss_pred -hhHHHH-----------------------hhhhc-CCCceEEE--EecccccccCCCCCCccCCCHHHHHHHHHHhcCC
Q psy2719 529 -DFDLYL-----------------------NNYVD-GNCKLSLI--LDYDGTLTPLTSHPDLAVMSEETKRVLERLANMP 581 (808)
Q Consensus 529 -~~~~~~-----------------------~~y~~-~~~~rli~--~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~ 581 (808)
....+. ..|.. ...+++|+ +|+|+| +. ..+.++++++.+.+..
T Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~---------~~~~l~~~~~~~~~~~ 800 (1050)
T TIGR02468 731 DRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD---------LLQIIKNIFEAVRKER 800 (1050)
T ss_pred hHHHHHHHHHhhccccccccccccccccccccCccccccceEEEEEeccCCC-CC---------hHHHHHHHHHHHhccc
Confidence 000000 01100 11245556 899999 22 1233333344443210
Q ss_pred CCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeEEEEeCCChhhHHHhc---Ccc---ceEEEcccceeEe
Q psy2719 582 DVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLMKMV---NIE---KVTYAGSHGLEIL 655 (808)
Q Consensus 582 ~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~---~~~---~~~li~~nG~~i~ 655 (808)
. -..+.++++|||++..+.+.+ +++ ++.+||.-|+.|+
T Consensus 801 ----------~--------------------------~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIy 844 (1050)
T TIGR02468 801 ----------M--------------------------EGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELY 844 (1050)
T ss_pred ----------c--------------------------CCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCccee
Confidence 0 014789999999999988876 333 4689999999998
Q ss_pred cCC------Cc-----eeecCCChhH-HHHHHHHHHHHHhh----c--cCCCcEEEec----CcEEEEEcCcCChhhHHH
Q psy2719 656 HPD------GT-----KFVHPVPKEY-AEKLRQLIKALQDE----V--CHDGAWIENK----GVLLTFHYRETPIERREY 713 (808)
Q Consensus 656 ~~~------~~-----~~~~~~~~~~-~~~v~~i~~~~~~~----~--~~~g~~ie~k----~~~~~~~~~~~~~~~~~~ 713 (808)
.+. .. .|...+...| .+.+++.+..+... . ..++...+.. .+++++...+.+. ..
T Consensus 845 y~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d~~~---~~ 921 (1050)
T TIGR02468 845 YPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSK---VP 921 (1050)
T ss_pred ccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEecCccc---Cc
Confidence 862 11 1334455566 44456555443321 0 1123344332 3455554222221 12
Q ss_pred HHHHHHHHHHhcCe--eE-E-ccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeE-EEEe-----C-HHHHHhccC
Q psy2719 714 IIDRASQIFLEAGF--EP-H-NALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRI-IYAG-----N-EDAMLALQG 782 (808)
Q Consensus 714 ~~~~~~~~~~~~~~--~v-~-~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~v-ia~G-----D-~~Mf~~~~~ 782 (808)
.++.+++.+...++ ++ . .+..+++|.|. .+|||.||++|..+ +|++.+ .+ ++.| | ++|+.-+
T Consensus 922 ~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~-~ASKgqAlRyL~~r-wgi~l~---~v~VfaGdSGntD~e~Ll~G~-- 994 (1050)
T TIGR02468 922 PVKELRKLLRIQGLRCHAVYCRNGTRLNVIPL-LASRSQALRYLFVR-WGIELA---NMAVFVGESGDTDYEGLLGGL-- 994 (1050)
T ss_pred cHHHHHHHHHhCCCceEEEeecCCcEeeeeeC-CCCHHHHHHHHHHH-cCCChH---HeEEEeccCCCCCHHHHhCCc--
Confidence 24666777766554 33 3 34589999997 99999999999987 999986 55 5588 5 5565443
Q ss_pred CccEEEeC
Q psy2719 783 IACTFRVD 790 (808)
Q Consensus 783 ~~~~vav~ 790 (808)
-.||-+.
T Consensus 995 -~~tvi~~ 1001 (1050)
T TIGR02468 995 -HKTVILK 1001 (1050)
T ss_pred -eeEEEEe
Confidence 2345554
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-30 Score=277.44 Aligned_cols=232 Identities=26% Similarity=0.480 Sum_probs=184.0
Q ss_pred hHHHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHH
Q psy2719 530 FDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEET 609 (808)
Q Consensus 530 ~~~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~ 609 (808)
|+.+ .+|.+ ++++++||||||||+++..+|+...++++++++|++|++.
T Consensus 108 ~~~~-~~~~~-~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~----------------------------- 156 (384)
T PLN02580 108 FEQI-ANFAK-GKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY----------------------------- 156 (384)
T ss_pred HHHH-HHHhh-cCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-----------------------------
Confidence 4443 45655 5788999999999999999999999999999999999876
Q ss_pred HHHHHHHhCCCCCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCc------------------eee-cCCChhH
Q psy2719 610 KRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGT------------------KFV-HPVPKEY 670 (808)
Q Consensus 610 ~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~------------------~~~-~~~~~~~ 670 (808)
..|+|+|||++..|.++++..+++++++||++++.+.+. .+. .....+|
T Consensus 157 ------------~~VAIVSGR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~ 224 (384)
T PLN02580 157 ------------FPTAIISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEF 224 (384)
T ss_pred ------------CCEEEEeCCCHHHHHHHhCCCCccEEEeCCceeecCCCCcccccccccccccccccccccccccchhh
Confidence 359999999999999999988899999999999864221 111 1113567
Q ss_pred HHHHHHHHHHHHhhc-cCCCcEEEecCcEEEEEcCcCChhhHHHHHHHHHHHHHhc-CeeEEccCeEEEEeCCCCCCHHH
Q psy2719 671 AEKLRQLIKALQDEV-CHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIFLEA-GFEPHNALMAIEAKPPVKWDQGR 748 (808)
Q Consensus 671 ~~~v~~i~~~~~~~~-~~~g~~ie~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~vEv~p~~~v~KG~ 748 (808)
.+.+.++++.+.+.. .++|+++|+|+++++||||.+++++.+.+.+.+++.+.++ ++.+..|++++||+|+.++|||.
T Consensus 225 ~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~ 304 (384)
T PLN02580 225 LPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRKVLEVRPVIDWNKGK 304 (384)
T ss_pred hhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEEEeCCeEEEEecCCCCCHHH
Confidence 777778877766543 4799999999999999999998776666667777776666 48889999999999833999999
Q ss_pred HHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccC--CccEEEeCCCCccccccccccCcC
Q psy2719 749 ASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQG--IACTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 749 av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~--~~~~vav~~~~~vk~~A~~~~~~~ 806 (808)
||++|+++ ++++..+...++||| |++||+++++ .|++|+|++.+ -.+.|+|.+++.
T Consensus 305 Av~~Ll~~-~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~-~~t~A~y~L~dp 366 (384)
T PLN02580 305 AVEFLLES-LGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVP-KESNAFYSLRDP 366 (384)
T ss_pred HHHHHHHh-cCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCC-CCccceEEcCCH
Confidence 99999996 888753211359999 9999999764 37789999732 146899988753
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=272.66 Aligned_cols=234 Identities=24% Similarity=0.431 Sum_probs=184.5
Q ss_pred chhhHHHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccch
Q psy2719 527 LDDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMS 606 (808)
Q Consensus 527 ~~~~~~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~ 606 (808)
++.|+.+++.+. .++++||+||||||+++.++|+...++++++++|++|+ +
T Consensus 97 l~~~~~~~~~~~--~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~-------------------------- 147 (366)
T PLN03017 97 LEMFEQIMEASR--GKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-K-------------------------- 147 (366)
T ss_pred HHHHHHHHHHhc--CCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-c--------------------------
Confidence 345566655443 46789999999999999888877789999999999998 4
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCceee---------cCCChhHHHHHHHH
Q psy2719 607 EETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFV---------HPVPKEYAEKLRQL 677 (808)
Q Consensus 607 ~~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~---------~~~~~~~~~~v~~i 677 (808)
++.|+|+|||++..+.++++..+++++++||++++.+++.... .....+|.+.+.++
T Consensus 148 --------------~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v 213 (366)
T PLN03017 148 --------------CFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEV 213 (366)
T ss_pred --------------CCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceeccccccccccccchhhHHHHHHH
Confidence 6789999999999999998877789999999999876432110 11224577777777
Q ss_pred HHHHHhhc-cCCCcEEEecCcEEEEEcCcCChhhHHHHHHHHHHHHHhc-CeeEEccCeEEEEeCCCCCCHHHHHHHHHH
Q psy2719 678 IKALQDEV-CHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIFLEA-GFEPHNALMAIEAKPPVKWDQGRASIHILR 755 (808)
Q Consensus 678 ~~~~~~~~-~~~g~~ie~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~vEv~p~~~v~KG~av~~ll~ 755 (808)
++.+.+.. .++|+++|+|+++++||||.+++....++...+...+.++ ++.+..|++.+||+|+.++|||.|+++|++
T Consensus 214 ~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~ 293 (366)
T PLN03017 214 YRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLE 293 (366)
T ss_pred HHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHH
Confidence 55544332 3899999999999999999998765556667777777776 488999999999999559999999999999
Q ss_pred HhcCCCCCcceeEEEEe----CHHHHHhccC--CccEEEeCCCCccccccccccCc
Q psy2719 756 TMYGVDWSERVRIIYAG----NEDAMLALQG--IACTFRVDSSPTVKSSWKQGSNH 805 (808)
Q Consensus 756 ~~~~i~~~~~~~via~G----D~~Mf~~~~~--~~~~vav~~~~~vk~~A~~~~~~ 805 (808)
. +++...+...++|+| ||+||+++++ .|++|.|+..+. .+.|+|.+++
T Consensus 294 ~-l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k-~T~A~y~L~d 347 (366)
T PLN03017 294 S-LGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK-DTDASYSLQD 347 (366)
T ss_pred h-cccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC-CCcceEeCCC
Confidence 6 776533223699999 9999999964 468899995321 4889998875
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=270.00 Aligned_cols=233 Identities=25% Similarity=0.437 Sum_probs=184.3
Q ss_pred hhhHHHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchH
Q psy2719 528 DDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSE 607 (808)
Q Consensus 528 ~~~~~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~ 607 (808)
+.|++++... .+++++||+||||||+++..+|+...++++++++|++|++.
T Consensus 85 ~~~~~~~~~~--~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~--------------------------- 135 (354)
T PLN02151 85 NMFEEILHKS--EGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC--------------------------- 135 (354)
T ss_pred HHHHHHHHhh--cCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcC---------------------------
Confidence 3455555542 25678999999999999999999889999999999999853
Q ss_pred HHHHHHHHHhCCCCCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCC-ceee-------cCCChhHHHHHHHHHH
Q psy2719 608 ETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDG-TKFV-------HPVPKEYAEKLRQLIK 679 (808)
Q Consensus 608 ~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~-~~~~-------~~~~~~~~~~v~~i~~ 679 (808)
..|+|+|||+...+.++++.++++++++||++++.+++ ..|. .....+|.+.+.++++
T Consensus 136 --------------~~vaIvSGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~ 201 (354)
T PLN02151 136 --------------FPTAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYK 201 (354)
T ss_pred --------------CCEEEEECCCHHHHHHHcCCccceEEEeCCceeecCCCCccccccccccccccchhhHHHHHHHHH
Confidence 57999999999999999998889999999999987643 2231 2234568888888887
Q ss_pred HHHhhc-cCCCcEEEecCcEEEEEcCcCChhhHHHHHHHHHHHHHhc-CeeEEccCeEEEEeCCCCCCHHHHHHHHHHHh
Q psy2719 680 ALQDEV-CHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIFLEA-GFEPHNALMAIEAKPPVKWDQGRASIHILRTM 757 (808)
Q Consensus 680 ~~~~~~-~~~g~~ie~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~ 757 (808)
.+.+.. .++|+++|+|+++++||||.++++...++...+.+.+.++ ++.+..|++++||+|+.++|||.||++|++.
T Consensus 202 ~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~- 280 (354)
T PLN02151 202 KLVEKTKSIPGAKVENNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLES- 280 (354)
T ss_pred HHHHHHhcCCCCEEEecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHh-
Confidence 776432 4899999999999999999998764455666677777666 4889999999999995599999999999996
Q ss_pred cCCCCCcceeEEEEe----CHHHHHhccC--CccEEEeCCCCccccccccccCc
Q psy2719 758 YGVDWSERVRIIYAG----NEDAMLALQG--IACTFRVDSSPTVKSSWKQGSNH 805 (808)
Q Consensus 758 ~~i~~~~~~~via~G----D~~Mf~~~~~--~~~~vav~~~~~vk~~A~~~~~~ 805 (808)
+++.....++++|+| ||+||++++. .|+++.|+..+ -.+.|+|.+++
T Consensus 281 ~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~-k~T~A~y~L~d 333 (354)
T PLN02151 281 LGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYA-KETNASYSLQE 333 (354)
T ss_pred cccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCC-CCCcceEeCCC
Confidence 665532223689999 9999999863 36778887421 13789998875
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=268.36 Aligned_cols=216 Identities=29% Similarity=0.519 Sum_probs=142.0
Q ss_pred EEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeEEE
Q psy2719 547 ILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNIGI 626 (808)
Q Consensus 547 ~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v~I 626 (808)
||||||||.++..+|+...++++++++|++|+++ |++.|+|
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~---------------------------------------~~~~v~I 41 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAAD---------------------------------------PNNTVAI 41 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHH---------------------------------------SE--EEE
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhcc---------------------------------------CCCEEEE
Confidence 7999999999988887778888887777777665 6889999
Q ss_pred EeCCChhhHHHhcCccceEEEcccceeEecCCCceeec---CCChhHHHHHHHHHHHHHhhccCCCcEEEecCcEEEEEc
Q psy2719 627 ISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVH---PVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHY 703 (808)
Q Consensus 627 ~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~---~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~~~~~ 703 (808)
+|||+...+..++++++++++++||++++.+++..|.. ....+|++.+.++++.+.++ ++|+++|.|+++++|||
T Consensus 42 vSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~pG~~iE~K~~sv~~Hy 119 (235)
T PF02358_consen 42 VSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNLPADEDLEWKDEVREILEYFAER--TPGSFIEDKEFSVAFHY 119 (235)
T ss_dssp E-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-TTGGGGHHHHHHHHHHHTTHHHH--STT-EEEEETTEEEEE-
T ss_pred EEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccccccccchHHHHHHHHHHHHHHhh--ccCcEEEECCeEEEEEe
Confidence 99999999888888889999999999999988766653 34457999999999999887 99999999999999999
Q ss_pred CcCChhhH----HHHHHHHHHHHHhc-CeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CH
Q psy2719 704 RETPIERR----EYIIDRASQIFLEA-GFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NE 774 (808)
Q Consensus 704 ~~~~~~~~----~~~~~~~~~~~~~~-~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~ 774 (808)
|.+++++. .++.+++.+..... ++++..|+++|||+|+ +++||.|++.|+++ ++......+.++|+| ||
T Consensus 120 r~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~-~~~KG~av~~ll~~-~~~~~~~~~~~l~~GDD~tDE 197 (235)
T PF02358_consen 120 RNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPP-GVNKGSAVRRLLEE-LPFAGPKPDFVLYIGDDRTDE 197 (235)
T ss_dssp TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-T-T--HHHHHHHHHTT-S---------EEEEESSHHHH
T ss_pred cCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeC-CCChHHHHHHHHHh-cCccccccceeEEecCCCCCH
Confidence 99988743 35556666666554 8999999999999998 99999999999996 554311123799999 99
Q ss_pred HHHHhccCC---ccEEEeCC--CCccccccccccCc
Q psy2719 775 DAMLALQGI---ACTFRVDS--SPTVKSSWKQGSNH 805 (808)
Q Consensus 775 ~Mf~~~~~~---~~~vav~~--~~~vk~~A~~~~~~ 805 (808)
+||+++++. |+++.|+. ..+.++.|+|.+++
T Consensus 198 ~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 198 DAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp HHHHTTTTS----EEEEES-----------------
T ss_pred HHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 999999986 88999996 35778999999875
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-28 Score=251.27 Aligned_cols=212 Identities=27% Similarity=0.462 Sum_probs=172.5
Q ss_pred HHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHH
Q psy2719 532 LYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKR 611 (808)
Q Consensus 532 ~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~ 611 (808)
.++..|.. +++++||+||||||+++..+|....++++++++|++|+++
T Consensus 8 ~~~~~~~~-a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~------------------------------- 55 (266)
T COG1877 8 QLLEPYLN-ARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASD------------------------------- 55 (266)
T ss_pred hhcccccc-ccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhc-------------------------------
Confidence 34566655 6788999999999999999998888999999988888877
Q ss_pred HHHHHhCCCCCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCceeecC---CChhHHHHHHHHHHHHHhhccCC
Q psy2719 612 VLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVHP---VPKEYAEKLRQLIKALQDEVCHD 688 (808)
Q Consensus 612 ~l~~l~~~pg~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~~---~~~~~~~~v~~i~~~~~~~~~~~ 688 (808)
+++.|+|+|||+..+++.+++.++++++|+||++++.+.+..|... ....|.+.+.++++++.++ +|
T Consensus 56 --------~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r--~p 125 (266)
T COG1877 56 --------PRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVER--TP 125 (266)
T ss_pred --------CCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhc--CC
Confidence 5789999999999999999999999999999999988877665533 3345777999999999998 99
Q ss_pred CcEEEecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcC-eeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCccee
Q psy2719 689 GAWIENKGVLLTFHYRETPIERREYIIDRASQIFLEAG-FEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVR 767 (808)
Q Consensus 689 g~~ie~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~ 767 (808)
|+++|.|++++.||||+++++..............+.. +++..|++.||++|+ ++|||.+++.++++ ...+. ..
T Consensus 126 Gs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~-~~~KG~a~~~i~~~-~~~~~---~~ 200 (266)
T COG1877 126 GSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPP-GVSKGAAIKYIMDE-LPFDG---RF 200 (266)
T ss_pred CeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeC-CcchHHHHHHHHhc-CCCCC---Cc
Confidence 99999999999999999987544322211122222233 889999999999998 99999999999986 54442 16
Q ss_pred EEEEe----CHHHHHhccCC-ccEEEeC
Q psy2719 768 IIYAG----NEDAMLALQGI-ACTFRVD 790 (808)
Q Consensus 768 via~G----D~~Mf~~~~~~-~~~vav~ 790 (808)
++|.| |++||+++++. ++++.|+
T Consensus 201 ~~~aGDD~TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 201 PIFAGDDLTDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred ceecCCCCccHHHHHhhccCCCceEEec
Confidence 99999 99999999842 4567776
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-28 Score=255.06 Aligned_cols=213 Identities=21% Similarity=0.314 Sum_probs=170.5
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
++++||+||||||++...+|+.+.++++++++|++|+++ +|
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~---------------------------------------~g 53 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATA---------------------------------------ND 53 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhC---------------------------------------CC
Confidence 468999999999999888888889999999999999875 48
Q ss_pred CeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEecCcEEEE
Q psy2719 622 VNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTF 701 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~~~ 701 (808)
+.|+|+|||+...+.++++..++.++++||+++++.++..+...++.++...+.+.++.+.++ ++|+++|.|+.++.+
T Consensus 54 ~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~~--~pg~~ve~k~~~~~~ 131 (266)
T PRK10187 54 GALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALAQ--LPGAELEAKGMAFAL 131 (266)
T ss_pred CcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhcc--CCCcEEEeCCcEEEE
Confidence 999999999999999999765678999999999876555445667777666565555555544 889999999999999
Q ss_pred EcCcCChhhHHHHHHHHH-HHHHhcC-eeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHH
Q psy2719 702 HYRETPIERREYIIDRAS-QIFLEAG-FEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NED 775 (808)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~-~~~~~~~-~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~ 775 (808)
||+.++.+ .+.+..+. .+.+.++ +.+.+|+.++||+|+ ++|||.||++++++ +|++.+ +++||| |++
T Consensus 132 h~r~~~~~--~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~-g~~Kg~al~~ll~~-~~~~~~---~v~~~GD~~nD~~ 204 (266)
T PRK10187 132 HYRQAPQH--EDALLALAQRITQIWPQLALQPGKCVVEIKPR-GTNKGEAIAAFMQE-APFAGR---TPVFVGDDLTDEA 204 (266)
T ss_pred ECCCCCcc--HHHHHHHHHHHHhhCCceEEeCCCEEEEeeCC-CCCHHHHHHHHHHh-cCCCCC---eEEEEcCCccHHH
Confidence 99887432 22333333 3333444 567789999999998 99999999999997 888764 799999 999
Q ss_pred HHHhcc-CCccEEEeCCCCccccccccccCc
Q psy2719 776 AMLALQ-GIACTFRVDSSPTVKSSWKQGSNH 805 (808)
Q Consensus 776 Mf~~~~-~~~~~vav~~~~~vk~~A~~~~~~ 805 (808)
||+.+. ..|++|+|++.. +.|+|++++
T Consensus 205 mf~~~~~~~g~~vavg~a~---~~A~~~l~~ 232 (266)
T PRK10187 205 GFAVVNRLGGISVKVGTGA---TQASWRLAG 232 (266)
T ss_pred HHHHHHhcCCeEEEECCCC---CcCeEeCCC
Confidence 999993 135779999864 668888875
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=250.04 Aligned_cols=217 Identities=26% Similarity=0.365 Sum_probs=170.2
Q ss_pred CCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCC
Q psy2719 541 NCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMP 620 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~p 620 (808)
+++++|+|||||||++...+|+...++++++++|++|.++ |
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~---------------------------------------~ 41 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAAR---------------------------------------P 41 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhC---------------------------------------C
Confidence 3578999999999999888788788888888888888776 6
Q ss_pred CCeEEEEeCCChhhHHHhcCccceEEEcccceeEecCCCc-eeecCCC---hhHHHHHHHHHHHHHhhccCCCcEEEecC
Q psy2719 621 DVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGT-KFVHPVP---KEYAEKLRQLIKALQDEVCHDGAWIENKG 696 (808)
Q Consensus 621 g~~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~-~~~~~~~---~~~~~~v~~i~~~~~~~~~~~g~~ie~k~ 696 (808)
++.|+|+|||+...+...+..++++++++||++++.++.. .|. ..+ ..|++.+.++.+++.++ +|+++|.|+
T Consensus 42 ~~~v~ivSGR~~~~~~~~~~~~~~~l~g~hG~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~---pG~~iE~K~ 117 (244)
T TIGR00685 42 HNAIWIISGRKFLEKWLGVKLPGLGLAGEHGCEMKDNGSCQDWV-NLTEKIPSWKVRANELREEITTR---PGVFIERKG 117 (244)
T ss_pred CCeEEEEECCChhhccccCCCCceeEEeecCEEEecCCCcceee-echhhhhhHHHHHHHHHHHHhcC---CCcEEEecc
Confidence 7889999999988887777777889999999999864332 232 222 36888888899988874 899999999
Q ss_pred cEEEEEcCcC-ChhhHHH-HHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe--
Q psy2719 697 VLLTFHYRET-PIERREY-IIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG-- 772 (808)
Q Consensus 697 ~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G-- 772 (808)
.+++||||.+ +++.... +.+.+..+....++.+..|+.++|++|+ ++|||.+++.++++ ++++.. .+++||
T Consensus 118 ~s~~~hyr~a~d~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~e~~p~-~~~Kg~a~~~~~~~-~~~~~~---~~i~iGD~ 192 (244)
T TIGR00685 118 VALAWHYRQAPVPELARFRAKELKEKILSFTDLEVMDGKAVVELKPR-FVNKGEIVKRLLWH-QPGSGI---SPVYLGDD 192 (244)
T ss_pred eEEEEEeccCCCcHHHHHHHHHHHHHHhcCCCEEEEECCeEEEEeeC-CCCHHHHHHHHHHh-cccCCC---ceEEEcCC
Confidence 9999999998 4444322 1222223333347888999999999998 99999999999997 787654 799999
Q ss_pred --CHHHHHhcc----C-CccEEEeCCCCccccccccccCcC
Q psy2719 773 --NEDAMLALQ----G-IACTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 773 --D~~Mf~~~~----~-~~~~vav~~~~~vk~~A~~~~~~~ 806 (808)
|++||+.+. + .+++++|+ ....++.|+|++++.
T Consensus 193 ~~D~~~~~~~~~~~~~~g~~~v~v~-~g~~~~~A~~~~~~~ 232 (244)
T TIGR00685 193 ITDEDAFRVVNNQWGNYGFYPVPIG-SGSKKTVAKFHLTGP 232 (244)
T ss_pred CcHHHHHHHHhcccCCCCeEEEEEe-cCCcCCCceEeCCCH
Confidence 999999992 1 24678886 334678899998864
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.9e-24 Score=225.30 Aligned_cols=208 Identities=18% Similarity=0.251 Sum_probs=143.3
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|++|+||||++ ++..++++++++|++++++ |+
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~al~~~~~~----------------------------------------g~ 37 (264)
T COG0561 3 IKLLAFDLDGTLLD-----SNKTISPETKEALARLREK----------------------------------------GV 37 (264)
T ss_pred eeEEEEcCCCCccC-----CCCccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 47999999999999 4456999999999999988 99
Q ss_pred eEEEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEecCcE--
Q psy2719 623 NIGIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVL-- 698 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~-- 698 (808)
.|+|+|||++..+.+.+... ..++|++||++++.+++..+..+++.+ .+..+++...+.......+.......
T Consensus 38 ~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 114 (264)
T COG0561 38 KVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSRE---DVEELLELLEDFQGIALVLYTDDGIYLT 114 (264)
T ss_pred EEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHH---HHHHHHHHHHhccCceEEEEeccceeec
Confidence 99999999999988887422 237999999999998555667788775 55666666543200111111100000
Q ss_pred ----------EE-----EEcCcCCh---------hhHHHHHHHHHHHHH-hc---CeeEEccC-eEEEEeCCCCCCHHHH
Q psy2719 699 ----------LT-----FHYRETPI---------ERREYIIDRASQIFL-EA---GFEPHNAL-MAIEAKPPVKWDQGRA 749 (808)
Q Consensus 699 ----------~~-----~~~~~~~~---------~~~~~~~~~~~~~~~-~~---~~~v~~g~-~~vEv~p~~~v~KG~a 749 (808)
.. +.....+. ....+...++.+.+. .+ .+.+.++. .++||+|+ |+|||.|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~-g~~K~~a 193 (264)
T COG0561 115 KKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISLDITPK-GVSKGYA 193 (264)
T ss_pred cCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCceEEEecC-CCchHHH
Confidence 00 00000000 000112222322222 22 34455444 45999998 9999999
Q ss_pred HHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 750 SIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 750 v~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+++|+++ +|++.+ +||||| |++||+.++ ++|||+| .+++|+.|++++.++
T Consensus 194 l~~l~~~-lgi~~~---~v~afGD~~ND~~Ml~~ag---~gvam~Na~~~~k~~A~~vt~~n 248 (264)
T COG0561 194 LQRLAKL-LGIKLE---EVIAFGDSTNDIEMLEVAG---LGVAMGNADEELKELADYVTTSN 248 (264)
T ss_pred HHHHHHH-hCCCHH---HeEEeCCccccHHHHHhcC---eeeeccCCCHHHHhhCCcccCCc
Confidence 9999996 899864 799999 999999884 5599998 589999999998875
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-23 Score=237.86 Aligned_cols=202 Identities=15% Similarity=0.158 Sum_probs=147.0
Q ss_pred eEEEEEEeecCcCccccchhhcCc-----------------hhhhhc------CCCeEEEEEcCccccCChHHHHHHHHH
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENA-----------------PENLKD------ENLKVILGVDRLDYTKGLVHRIKAFER 335 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~-----------------~~~~~~------~~~~iil~V~Rl~~~KGi~~~l~A~~~ 335 (808)
+..++.+||||||++.|.+..... ..++++ .+.++|++|||+.+.||++.+++|+++
T Consensus 240 ~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~ 319 (485)
T PRK14099 240 RADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPT 319 (485)
T ss_pred hCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHH
Confidence 356899999999999997643210 112222 246788899999999999999999999
Q ss_pred HHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHH-HhcCeEEEC
Q psy2719 336 LLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALY-RDSAIALVT 414 (808)
Q Consensus 336 ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly-~~Adv~v~~ 414 (808)
++++ .+.|+++|.+. .++++++++++.+... .++++.|. ++++..+| +.||+||+|
T Consensus 320 l~~~------~~~lvivG~G~-------~~~~~~l~~l~~~~~~--------~v~~~~G~--~~~l~~~~~a~aDifv~P 376 (485)
T PRK14099 320 LLGE------GAQLALLGSGD-------AELEARFRAAAQAYPG--------QIGVVIGY--DEALAHLIQAGADALLVP 376 (485)
T ss_pred HHhc------CcEEEEEecCC-------HHHHHHHHHHHHHCCC--------CEEEEeCC--CHHHHHHHHhcCCEEEEC
Confidence 8753 24577777431 1345566666554321 34456676 57888877 569999999
Q ss_pred CCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC------------ceEEECCCCHHHHHHHHHHH---hCCCHHHH
Q psy2719 415 PLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH------------EALLVNPYEIDAAANVLHRA---LCMPRDER 479 (808)
Q Consensus 415 S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~------------~~llvnP~d~~~lA~ai~~~---L~~~~~e~ 479 (808)
|.+||||++.+|||||+ +|+|+|+.+|..+.+. +|++|+|.|+++++++|.++ ++ .++.+
T Consensus 377 S~~E~fGl~~lEAma~G----~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~-d~~~~ 451 (485)
T PRK14099 377 SRFEPCGLTQLCALRYG----AVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFA-DPVAW 451 (485)
T ss_pred CccCCCcHHHHHHHHCC----CCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhc-CHHHH
Confidence 99999999999999995 4688899988888762 49999999999999999984 43 33444
Q ss_pred HHHHHHHhHHHhcCCHHHHHHHHHHHHHccc
Q psy2719 480 ELRMSQLRHREQQLDVNHWMNSFLSSMGALD 510 (808)
Q Consensus 480 ~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 510 (808)
++..++.+ .+.++|..-++++++..+++.
T Consensus 452 ~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 452 RRLQRNGM--TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred HHHHHHhh--hhcCChHHHHHHHHHHHHHHH
Confidence 43333333 467899998888887776653
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-23 Score=239.56 Aligned_cols=203 Identities=15% Similarity=0.204 Sum_probs=149.5
Q ss_pred eEEEEEEeecCcCccccchhhcC-----------------chhhhhc-----CCCeEEEEEcCccccCChHHHHHHHHHH
Q psy2719 279 RTVHVKALPIGIPFERFVQLAEN-----------------APENLKD-----ENLKVILGVDRLDYTKGLVHRIKAFERL 336 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~-----------------~~~~~~~-----~~~~iil~V~Rl~~~KGi~~~l~A~~~l 336 (808)
+..++.+||||||++.|.+.... ...++++ .+.++|++|||+.+.||++.+++|++++
T Consensus 228 ~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l 307 (466)
T PRK00654 228 RSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPEL 307 (466)
T ss_pred cccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHH
Confidence 35679999999999998764210 0112222 2568999999999999999999999998
Q ss_pred HHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC
Q psy2719 337 LEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL 416 (808)
Q Consensus 337 l~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~ 416 (808)
+++ + +.|+++|.+. + .+++++++++.+.+. .+.++.+. +.+.+..+|++||+||+||.
T Consensus 308 ~~~--~----~~lvivG~g~----~---~~~~~l~~l~~~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~ 365 (466)
T PRK00654 308 LEQ--G----GQLVLLGTGD----P---ELEEAFRALAARYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSR 365 (466)
T ss_pred Hhc--C----CEEEEEecCc----H---HHHHHHHHHHHHCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCC
Confidence 764 2 4577777432 1 245566666655432 24555555 66667899999999999999
Q ss_pred CCCCChhHHHHHHhccCCCceEEEcCCCCCcccc---------CceEEECCCCHHHHHHHHHHHhCC--CHHHHHHHHHH
Q psy2719 417 RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM---------HEALLVNPYEIDAAANVLHRALCM--PRDERELRMSQ 485 (808)
Q Consensus 417 ~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l---------~~~llvnP~d~~~lA~ai~~~L~~--~~~e~~~r~~~ 485 (808)
+||||++.+|||+|+ .|+|+|+.+|..+.+ .+|++|+|.|+++++++|.++++. .++.++++..+
T Consensus 366 ~E~~gl~~lEAma~G----~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 441 (466)
T PRK00654 366 FEPCGLTQLYALRYG----TLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQ 441 (466)
T ss_pred CCCchHHHHHHHHCC----CCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 999999999999995 579999999998877 249999999999999999999863 22233333332
Q ss_pred HhHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 486 LRHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 486 ~~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
.+ ...++|+.-++++++..+++
T Consensus 442 ~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 442 AM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred Hh--ccCCChHHHHHHHHHHHHHH
Confidence 22 25788888888887766654
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-23 Score=232.27 Aligned_cols=265 Identities=18% Similarity=0.233 Sum_probs=183.2
Q ss_pred CCCEEEEeccchHHHHHHHHhhc--CC-EEEeccHHHHHHHHHHHHHHhC-ceeecCCeEEEEcCeEEEEEEeecCcCcc
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQVA--YD-FVGFHIEDYCLNFIDCCCRRLG-SRVDRNNMLVELAGRTVHVKALPIGIPFE 293 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~~--~d-ligf~~~~~~~~fl~~~~~~l~-~~~~~~~~~i~~~gr~~~v~v~p~GID~~ 293 (808)
..|+|++|+... +.. .++++. +- ++.+|.. +....+..+.+++. ++...+.+ .-.....++.++|+|||.+
T Consensus 99 ~~~vi~v~~~~~-~~~-~~~~~~~~~~~v~~~h~~-~~~~~~~~~~~ii~~S~~~~~~~--~~~~~~~~i~vIpngvd~~ 173 (380)
T PRK15484 99 KDSVIVIHNSMK-LYR-QIRERAPQAKLVMHMHNA-FEPELLDKNAKIIVPSQFLKKFY--EERLPNADISIVPNGFCLE 173 (380)
T ss_pred CCcEEEEeCcHH-hHH-HHHhhCCCCCEEEEEecc-cChhHhccCCEEEEcCHHHHHHH--HhhCCCCCEEEecCCCCHH
Confidence 489999999543 222 233332 22 3455543 22323333222221 11111111 0012234678999999998
Q ss_pred ccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHH
Q psy2719 294 RFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDE 369 (808)
Q Consensus 294 ~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~ 369 (808)
.|.+... ...++. .+.++|+++||+.+.||++.+++|+.++.+++|++ .|+++|.+......+..+++++
T Consensus 174 ~~~~~~~--~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~----~lvivG~g~~~~~~~~~~~~~~ 247 (380)
T PRK15484 174 TYQSNPQ--PNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFEKLATAHSNL----KLVVVGDPTASSKGEKAAYQKK 247 (380)
T ss_pred HcCCcch--HHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHHHHHHhCCCe----EEEEEeCCccccccchhHHHHH
Confidence 8875321 111211 36789999999999999999999999999888876 4888886543221223356667
Q ss_pred HHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCC-CCCChhHHHHHHhccCCCceEEEcCCCCCcc
Q psy2719 370 MDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLR-DGMNLVAKEYVACQIREPGVLILSPFAGAGG 448 (808)
Q Consensus 370 l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~-EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~ 448 (808)
+++++.+++. .+ .+.|.++.+++..+|+.||++|+||.+ ||||++++|||||+ .|+|+|..+|..+
T Consensus 248 l~~~~~~l~~--------~v-~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G----~PVI~s~~gg~~E 314 (380)
T PRK15484 248 VLEAAKRIGD--------RC-IMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG----KPVLASTKGGITE 314 (380)
T ss_pred HHHHHHhcCC--------cE-EEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC----CCEEEeCCCCcHh
Confidence 7777666542 24 467899999999999999999999974 99999999999995 5689999888887
Q ss_pred ccC---ceE-EECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHHc
Q psy2719 449 MMH---EAL-LVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 449 ~l~---~~l-lvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 508 (808)
.+. +|+ +++|.|++++|++|.++++++. ++++.+++++.+ ++++|..-++++++.|+.
T Consensus 315 iv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 315 FVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred hcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 773 476 6789999999999999998653 345556666554 678999999999988865
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-23 Score=233.12 Aligned_cols=261 Identities=17% Similarity=0.172 Sum_probs=188.0
Q ss_pred CCCEEEEeccchHHHHHHHHhhc----CCEEEeccHHH------------HHHHHHHHHHHhCc-eeecCCeEEEEcCeE
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQVA----YDFVGFHIEDY------------CLNFIDCCCRRLGS-RVDRNNMLVELAGRT 280 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~~----~dligf~~~~~------------~~~fl~~~~~~l~~-~~~~~~~~i~~~gr~ 280 (808)
..|+|+.|..+...+..++++.. .-...+|..+. .+..+..++.++.. +...+.+ ..++...
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l-~~~g~~~ 196 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRL-QKMGCPP 196 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhhhhhHHHHHHHHhCCEEEECCHHHHHHH-HHcCCCH
Confidence 47999999988766666666521 12344554321 11112222222221 1111111 2233345
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
.++.++|+|||++.|.+..... ..+...|++|||+.+.||++.+++|++.+.+++|++ .|+++|.+
T Consensus 197 ~ki~vi~nGvd~~~f~~~~~~~-----~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~----~l~ivG~G----- 262 (406)
T PRK15427 197 EKIAVSRMGVDMTRFSPRPVKA-----PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAF----RYRILGIG----- 262 (406)
T ss_pred HHEEEcCCCCCHHHcCCCcccc-----CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCE----EEEEEECc-----
Confidence 6788999999999886532110 134457999999999999999999999998877765 47777742
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCC------CCCChhHHHHHHhccCC
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLR------DGMNLVAKEYVACQIRE 434 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~------EG~gLv~~Eama~~~~~ 434 (808)
+ +++++++++.+.+. .+.+.+.|.++++++..+|+.||+||+||.. ||||++++|||||+
T Consensus 263 ~----~~~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G--- 328 (406)
T PRK15427 263 P----WERRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVG--- 328 (406)
T ss_pred h----hHHHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCC---
Confidence 2 33455666655432 2456678999999999999999999999984 99999999999996
Q ss_pred CceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHHc
Q psy2719 435 PGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 508 (808)
.|+|+|..+|..+.+. +|++|+|.|++++|++|.+++++++++++++.+++++++ ..++++..++++.+.+++
T Consensus 329 -~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 329 -IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred -CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 5699999988888874 599999999999999999999966777777777788777 567999999888877654
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-23 Score=222.56 Aligned_cols=208 Identities=15% Similarity=0.175 Sum_probs=142.0
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|++|+||||++ ++..++++++++|++|+++ |+
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~----------------------------------------G~ 37 (270)
T PRK10513 3 IKLIAIDMDGTLLL-----PDHTISPAVKQAIAAARAK----------------------------------------GV 37 (270)
T ss_pred eEEEEEecCCcCcC-----CCCccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 47999999999998 3457999999999999988 99
Q ss_pred eEEEEeCCChhhHHHhcC---cc--ceEEEcccceeEecC--CCceeecCCChhHHHHHHHHHHHHHhhc------cCCC
Q psy2719 623 NIGIISGRTLENLMKMVN---IE--KVTYAGSHGLEILHP--DGTKFVHPVPKEYAEKLRQLIKALQDEV------CHDG 689 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~---~~--~~~li~~nG~~i~~~--~~~~~~~~~~~~~~~~v~~i~~~~~~~~------~~~g 689 (808)
.|+|+|||++..+...+. .. ..++|++||+.|++. ++..+..+++.+ .+..+++...+.- ...+
T Consensus 38 ~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~ 114 (270)
T PRK10513 38 NVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTALSYD---DYLYLEKLSREVGVHFHALDRNT 114 (270)
T ss_pred EEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecCCCHH---HHHHHHHHHHHcCCcEEEEECCE
Confidence 999999999998877663 22 246899999999863 333566778765 4555555544320 0112
Q ss_pred cEEEecCcE-----------EEEEcCcC---Ch--hh-------HHHHHHHHHHHH-Hhc--CeeE-EccCeEEEEeCCC
Q psy2719 690 AWIENKGVL-----------LTFHYRET---PI--ER-------REYIIDRASQIF-LEA--GFEP-HNALMAIEAKPPV 742 (808)
Q Consensus 690 ~~ie~k~~~-----------~~~~~~~~---~~--~~-------~~~~~~~~~~~~-~~~--~~~v-~~g~~~vEv~p~~ 742 (808)
.+...+... +...+... ++ .. ..+...++.+.+ ..+ .+.+ .++..++||+|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~- 193 (270)
T PRK10513 115 LYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDK- 193 (270)
T ss_pred EEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCC-
Confidence 222111100 00000000 00 00 011112222222 222 3444 467789999998
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
++|||.|+++|+++ +|++.+ +++||| |++||+.++ ++|||+| .+++|++|+||+++|
T Consensus 194 gvsKg~al~~l~~~-~gi~~~---~v~afGD~~NDi~Ml~~ag---~~vAm~NA~~~vK~~A~~vt~~n 255 (270)
T PRK10513 194 RVNKGTGVKSLAEH-LGIKPE---EVMAIGDQENDIAMIEYAG---VGVAMGNAIPSVKEVAQFVTKSN 255 (270)
T ss_pred CCChHHHHHHHHHH-hCCCHH---HEEEECCchhhHHHHHhCC---ceEEecCccHHHHHhcCeeccCC
Confidence 99999999999997 899975 799999 999999994 4599997 689999999999876
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.9e-23 Score=245.28 Aligned_cols=270 Identities=13% Similarity=0.110 Sum_probs=186.2
Q ss_pred CCCEEEEeccchHHHHHHHHhhc--------CCEEEeccHHHHHHHHHH----HHHHhCc-eeecCCeEEEE---cCeEE
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQVA--------YDFVGFHIEDYCLNFIDC----CCRRLGS-RVDRNNMLVEL---AGRTV 281 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~~--------~dligf~~~~~~~~fl~~----~~~~l~~-~~~~~~~~i~~---~gr~~ 281 (808)
..|||++||+|..++|.+++... .-++..|...|..+++.. +++++.+ +.....+ ... ..+..
T Consensus 709 ~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~~~n~lk~~l~~AD~ViTVS~tya~EI-~~~~~l~~~~~ 787 (1036)
T PLN02316 709 HPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEFGANHIGKAMAYADKATTVSPTYSREV-SGNSAIAPHLY 787 (1036)
T ss_pred CCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcccchhHHHHHHHHCCEEEeCCHHHHHHH-HhccCcccccC
Confidence 37999999999999999887642 234567776665555443 3333322 1111111 111 22356
Q ss_pred EEEEeecCcCccccchhhcC------------------chhhhhc-----CCCeEEEEEcCccccCChHHHHHHHHHHHH
Q psy2719 282 HVKALPIGIPFERFVQLAEN------------------APENLKD-----ENLKVILGVDRLDYTKGLVHRIKAFERLLE 338 (808)
Q Consensus 282 ~v~v~p~GID~~~f~~~~~~------------------~~~~~~~-----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~ 338 (808)
++.+||||||++.|.|.... ...++++ .+.++|++||||.+.||++.+++|+.++++
T Consensus 788 Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~ 867 (1036)
T PLN02316 788 KFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLE 867 (1036)
T ss_pred CEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhh
Confidence 89999999999988653210 0112222 257899999999999999999999999886
Q ss_pred hCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCC
Q psy2719 339 KHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRD 418 (808)
Q Consensus 339 ~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~E 418 (808)
. + +.||++|.+. + ..++.++++++.+++..+. ..|.+ .+..+......+|++||+||+||.+|
T Consensus 868 ~--~----~qlVIvG~Gp-----d-~~~e~~l~~La~~Lg~~~~----~rV~f-~g~~de~lah~iyaaADiflmPS~~E 930 (1036)
T PLN02316 868 R--N----GQVVLLGSAP-----D-PRIQNDFVNLANQLHSSHH----DRARL-CLTYDEPLSHLIYAGADFILVPSIFE 930 (1036)
T ss_pred c--C----cEEEEEeCCC-----C-HHHHHHHHHHHHHhCccCC----CeEEE-EecCCHHHHHHHHHhCcEEEeCCccc
Confidence 3 2 4477777432 1 2356677788777654332 13443 34445443457999999999999999
Q ss_pred CCChhHHHHHHhccCCCceEEEcCCCCCccccC----------------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHH
Q psy2719 419 GMNLVAKEYVACQIREPGVLILSPFAGAGGMMH----------------EALLVNPYEIDAAANVLHRALCMPRDERELR 482 (808)
Q Consensus 419 G~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~----------------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r 482 (808)
||||+.+|||+|+ .|+|+|..+|..+.+. +|++|+|.|+++++.+|.++|....+.+...
T Consensus 931 P~GLvqLEAMa~G----tppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~ 1006 (1036)
T PLN02316 931 PCGLTQLTAMRYG----SIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWF 1006 (1036)
T ss_pred CccHHHHHHHHcC----CCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHH
Confidence 9999999999995 5789999999988862 4999999999999999999998543323222
Q ss_pred HHHHhHHH-hcCCHHHHHHHHHHHHHcc
Q psy2719 483 MSQLRHRE-QQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 483 ~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 509 (808)
....++.+ ..++|..=++++++..+.+
T Consensus 1007 ~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 1007 NSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 33334433 4689999999988776654
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-22 Score=237.58 Aligned_cols=207 Identities=11% Similarity=0.091 Sum_probs=153.5
Q ss_pred CeEEEEEEeecCcCccccchhhcC-----------------chhhhhc-------CCCeEEEEEcCccccCChHHHHHHH
Q psy2719 278 GRTVHVKALPIGIPFERFVQLAEN-----------------APENLKD-------ENLKVILGVDRLDYTKGLVHRIKAF 333 (808)
Q Consensus 278 gr~~~v~v~p~GID~~~f~~~~~~-----------------~~~~~~~-------~~~~iil~V~Rl~~~KGi~~~l~A~ 333 (808)
.+..++.+||||||++.|.|.... ...++++ .+.++|++|||+.+.||++.+++|+
T Consensus 722 ~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~ 801 (977)
T PLN02939 722 FHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAI 801 (977)
T ss_pred cccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHH
Confidence 356788999999999999875321 0112222 1458999999999999999999999
Q ss_pred HHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEE
Q psy2719 334 ERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALV 413 (808)
Q Consensus 334 ~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~ 413 (808)
..+++ ++ +.|+++|.+. .+ .++++++.++.+++.. ..| .|.+.++......+|++||+||+
T Consensus 802 ~~Ll~--~d----vqLVIvGdGp---~~---~~e~eL~~La~~l~l~------drV-~FlG~~de~lah~IYAaADIFLm 862 (977)
T PLN02939 802 YKTAE--LG----GQFVLLGSSP---VP---HIQREFEGIADQFQSN------NNI-RLILKYDEALSHSIYAASDMFII 862 (977)
T ss_pred HHHhh--cC----CEEEEEeCCC---cH---HHHHHHHHHHHHcCCC------CeE-EEEeccCHHHHHHHHHhCCEEEE
Confidence 98875 23 4577777432 11 3456667776665421 134 44577787777899999999999
Q ss_pred CCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc------------CceEEECCCCHHHHHHHHHHHhC---CCHHH
Q psy2719 414 TPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM------------HEALLVNPYEIDAAANVLHRALC---MPRDE 478 (808)
Q Consensus 414 ~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l------------~~~llvnP~d~~~lA~ai~~~L~---~~~~e 478 (808)
||.+|||||+++|||+|+ .|||++..+|..+.+ .+|++|+|.|+++++++|.+++. ..++.
T Consensus 863 PSr~EPfGLvqLEAMAyG----tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~ 938 (977)
T PLN02939 863 PSMFEPCGLTQMIAMRYG----SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEV 938 (977)
T ss_pred CCCccCCcHHHHHHHHCC----CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHH
Confidence 999999999999999995 578999999988765 25999999999999999999885 23444
Q ss_pred HHHHHHHHhHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 479 RELRMSQLRHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 479 ~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
++.+..+. ....++|...++.+++...++
T Consensus 939 ~~~L~~~a--m~~dFSWe~~A~qYeeLY~~l 967 (977)
T PLN02939 939 WKQLVQKD--MNIDFSWDSSASQYEELYQRA 967 (977)
T ss_pred HHHHHHHH--HHhcCCHHHHHHHHHHHHHHH
Confidence 44333322 236789999999988777665
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-23 Score=220.51 Aligned_cols=207 Identities=14% Similarity=0.132 Sum_probs=141.0
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
|+|++|+||||++ ++..++++++++|++|+++ |+.
T Consensus 3 kli~~DlDGTLl~-----~~~~is~~~~~ai~~l~~~----------------------------------------G~~ 37 (266)
T PRK10976 3 QVVASDLDGTLLS-----PDHTLSPYAKETLKLLTAR----------------------------------------GIH 37 (266)
T ss_pred eEEEEeCCCCCcC-----CCCcCCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 6999999999998 3457999999999999988 999
Q ss_pred EEEEeCCChhhHHHhcCc--cceEEEcccceeEecCCCc-eeecCCChhHHHHHHHHHHHHHhh--c-----cCCCcEEE
Q psy2719 624 IGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPDGT-KFVHPVPKEYAEKLRQLIKALQDE--V-----CHDGAWIE 693 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~--~-----~~~g~~ie 693 (808)
|+|+|||++..+.+.+.. ...++|++||+.+++.++. .+..+++.+ .+.++++.+.+. . ...+.++.
T Consensus 38 ~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 114 (266)
T PRK10976 38 FVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRD---IASDLFGVVHDNPDIITNVYRDDEWFMN 114 (266)
T ss_pred EEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHH---HHHHHHHhhcccCCEEEEEEcCCeEEEc
Confidence 999999999988776642 1346899999999875443 455677765 566666655431 0 01111211
Q ss_pred ecCc-----------EEEEE-cCcCCh-hh--------HHHHHHHHHHHHH-hc--CeeE-EccCeEEEEeCCCCCCHHH
Q psy2719 694 NKGV-----------LLTFH-YRETPI-ER--------REYIIDRASQIFL-EA--GFEP-HNALMAIEAKPPVKWDQGR 748 (808)
Q Consensus 694 ~k~~-----------~~~~~-~~~~~~-~~--------~~~~~~~~~~~~~-~~--~~~v-~~g~~~vEv~p~~~v~KG~ 748 (808)
.... ..... ...... .. ..+....+.+.+. .+ .+.+ .++..++||+|+ ++|||.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~-gvsKg~ 193 (266)
T PRK10976 115 RHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAG-GVSKGH 193 (266)
T ss_pred CCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcC-CCChHH
Confidence 1000 00000 000000 00 0111222223222 22 2444 466789999998 999999
Q ss_pred HHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccc--cccCcC
Q psy2719 749 ASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWK--QGSNHT 806 (808)
Q Consensus 749 av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~--~~~~~~ 806 (808)
|+++|+++ +|++.+ +++||| |++||+.++ ++|||+| .+++|+.|+ +|+++|
T Consensus 194 al~~l~~~-lgi~~~---~viafGD~~NDi~Ml~~ag---~~vAm~NA~~~vK~~A~~~~v~~~n 251 (266)
T PRK10976 194 ALEAVAKK-LGYSLK---DCIAFGDGMNDAEMLSMAG---KGCIMGNAHQRLKDLLPELEVIGSN 251 (266)
T ss_pred HHHHHHHH-cCCCHH---HeEEEcCCcccHHHHHHcC---CCeeecCCcHHHHHhCCCCeecccC
Confidence 99999997 899975 899999 999999995 4599997 589999988 788865
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=237.04 Aligned_cols=321 Identities=13% Similarity=0.107 Sum_probs=206.0
Q ss_pred EeecCCHHHHhHHHHhhhHhhhhhhccC---CCCccccCHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEE
Q psy2719 146 IPVHVDKDEFEAYYNGCCNGTFWPLFHS---MPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVV 222 (808)
Q Consensus 146 ~pv~l~~~~~~~~y~~f~~~~lwp~~H~---~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvv 222 (808)
.|=+++++++-.|...|+..++--+... .|| ..+.|+|.+-.- |..+... -+|.
T Consensus 377 l~~~i~ke~l~p~L~~f~~~~~~~~~~~~~~~PD--lIHaHYwdsg~v-----A~~La~~----------------lgVP 433 (815)
T PLN00142 377 LRKWISRFDVWPYLETFAEDAASEILAELQGKPD--LIIGNYSDGNLV-----ASLLAHK----------------LGVT 433 (815)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCC--EEEECCccHHHH-----HHHHHHH----------------hCCC
Confidence 3457788888888898988888554332 244 567889988430 4443322 5789
Q ss_pred EEeccchHHHHHHHHhhcCCE--------EEeccHHHHHH-HHHHHHHHhCceee-cCCe--EE-EE-------------
Q psy2719 223 WIHDYQLLVAATTIRQVAYDF--------VGFHIEDYCLN-FIDCCCRRLGSRVD-RNNM--LV-EL------------- 276 (808)
Q Consensus 223 wihDyhl~llp~~lr~~~~dl--------igf~~~~~~~~-fl~~~~~~l~~~~~-~~~~--~i-~~------------- 276 (808)
+||.+|.+-..... ..++ ..|...-.++. .++.++.++.+... ..++ .+ +|
T Consensus 434 ~v~T~HsL~k~K~~---~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~r 510 (815)
T PLN00142 434 QCTIAHALEKTKYP---DSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYR 510 (815)
T ss_pred EEEEcccchhhhcc---ccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhh
Confidence 99999987644332 1111 01111001111 23345555543221 1100 01 01
Q ss_pred --cCe---EEEEEEeecCcCccccchhhcCchh--------------------hhh---cCCCeEEEEEcCccccCChHH
Q psy2719 277 --AGR---TVHVKALPIGIPFERFVQLAENAPE--------------------NLK---DENLKVILGVDRLDYTKGLVH 328 (808)
Q Consensus 277 --~gr---~~~v~v~p~GID~~~f~~~~~~~~~--------------------~~~---~~~~~iil~V~Rl~~~KGi~~ 328 (808)
+|- ..++.++|+|+|...|.|....... ... ..++++|++|||+++.||++.
T Consensus 511 vv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~ 590 (815)
T PLN00142 511 VVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTG 590 (815)
T ss_pred hhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHH
Confidence 011 2378899999999988753211000 011 145679999999999999999
Q ss_pred HHHHHHHHHHhCCCccCcEEEEEEEcC-CCCChHH--HHHHHHHHHHHHHHHhccCCCCCCccEEEEc---CCCCHHHHH
Q psy2719 329 RIKAFERLLEKHPEYVEKVTFLQISVP-SRTDVLE--YKALKDEMDQLVGRINGRFSKPNWSPIRYIF---GCIGQEELA 402 (808)
Q Consensus 329 ~l~A~~~ll~~~p~~~~~v~lv~ig~~-~~~~~~~--~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~---~~v~~~el~ 402 (808)
+++||.++.+..++ +.|+++|.+ .....++ ..+..+++.+++.+.+.. + .|.++. +..+.++++
T Consensus 591 LIeA~a~l~~l~~~----~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLy 660 (815)
T PLN00142 591 LVEWYGKNKRLREL----VNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELY 660 (815)
T ss_pred HHHHHHHHHHhCCC----cEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHH
Confidence 99999988665544 458888854 1111111 112224556666665432 1 344432 245567888
Q ss_pred HHHH-hcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhC---CC
Q psy2719 403 ALYR-DSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALC---MP 475 (808)
Q Consensus 403 aly~-~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~---~~ 475 (808)
.+|+ ++|+||+||.+||||++++|||||+ .|+|+|+.+|..+.+. +|++|+|.|++++|++|.+++. .+
T Consensus 661 r~iadaaDVfVlPS~~EgFGLvvLEAMA~G----lPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~D 736 (815)
T PLN00142 661 RYIADTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKED 736 (815)
T ss_pred HHHHhhCCEEEeCCcccCCCHHHHHHHHcC----CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCC
Confidence 8777 5799999999999999999999996 5699999999988884 5999999999999999987652 34
Q ss_pred HHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHH
Q psy2719 476 RDERELRMSQLRHRE-QQLDVNHWMNSFLSSM 506 (808)
Q Consensus 476 ~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l 506 (808)
++.+++..+++++++ +.+||...++++++..
T Consensus 737 p~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 737 PSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 556666666677776 6789999999988755
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.1e-23 Score=220.83 Aligned_cols=207 Identities=15% Similarity=0.205 Sum_probs=140.8
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
+||++|+||||++ ++..++++++++|++|+++ |+.
T Consensus 3 kli~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~----------------------------------------G~~ 37 (272)
T PRK15126 3 RLAAFDMDGTLLM-----PDHHLGEKTLSTLARLRER----------------------------------------DIT 37 (272)
T ss_pred cEEEEeCCCcCcC-----CCCcCCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 6999999999998 3457999999999999988 999
Q ss_pred EEEEeCCChhhHHHhcCc--cceEEEcccceeEecCCCc-eeecCCChhHHHHHHHHHHHHHhh-c-----cCCCcEEEe
Q psy2719 624 IGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPDGT-KFVHPVPKEYAEKLRQLIKALQDE-V-----CHDGAWIEN 694 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~-~-----~~~g~~ie~ 694 (808)
|+|+|||++..+.+.+.. .+.++|++||+.|++.++. .+..+++.+ .+.++++...+. . ...+.+...
T Consensus 38 ~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 114 (272)
T PRK15126 38 LTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD---VAELVLHQQWDTRASMHVFNDDGWFTGK 114 (272)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH---HHHHHHHHhhhcCcEEEEEcCCeEEecC
Confidence 999999999998877642 1346899999999964443 566778765 455666554332 0 011111110
Q ss_pred cCc---------EEEEEcCc---CC-hhh-------HHHHHHHHHHHHHh-c--CeeE-EccCeEEEEeCCCCCCHHHHH
Q psy2719 695 KGV---------LLTFHYRE---TP-IER-------REYIIDRASQIFLE-A--GFEP-HNALMAIEAKPPVKWDQGRAS 750 (808)
Q Consensus 695 k~~---------~~~~~~~~---~~-~~~-------~~~~~~~~~~~~~~-~--~~~v-~~g~~~vEv~p~~~v~KG~av 750 (808)
... ...+.... .. ... ..+...++.+.+.+ + .+.+ .++..++||.|+ ++|||+|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~-g~sKg~al 193 (272)
T PRK15126 115 EIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATDCLEVLPV-GCNKGAAL 193 (272)
T ss_pred CcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecC-CCChHHHH
Confidence 000 00000000 00 000 01112333333322 2 2444 466689999998 99999999
Q ss_pred HHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCcccccccc--ccCcC
Q psy2719 751 IHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQ--GSNHT 806 (808)
Q Consensus 751 ~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~--~~~~~ 806 (808)
+.|+++ +|++.+ +++||| |++||+.++ ++|||+| .+++|++|+| ++++|
T Consensus 194 ~~l~~~-~gi~~~---~v~afGD~~NDi~Ml~~ag---~~vAm~Na~~~vK~~A~~~~v~~~n 249 (272)
T PRK15126 194 AVLSQH-LGLSLA---DCMAFGDAMNDREMLGSVG---RGFIMGNAMPQLRAELPHLPVIGHC 249 (272)
T ss_pred HHHHHH-hCCCHH---HeEEecCCHHHHHHHHHcC---CceeccCChHHHHHhCCCCeecCCC
Confidence 999997 899975 799999 999999995 4599998 5899999997 77764
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=224.80 Aligned_cols=289 Identities=19% Similarity=0.183 Sum_probs=189.4
Q ss_pred cCHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhcCCE-EEeccHH--------
Q psy2719 180 FNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVAYDF-VGFHIED-------- 250 (808)
Q Consensus 180 ~~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~~dl-igf~~~~-------- 250 (808)
+....+..|...++.++..+. .. ...|+||+|+++.+.++...+....-+ +.+|+..
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~---~~-----------~~~Dvv~~h~~~~~~~~~~~~~~~~~~i~~~H~~~~~~~~~~~ 126 (372)
T cd03792 61 LSEEEKEIYLEWNEENAERPL---LD-----------LDADVVVIHDPQPLALPLFKKKRGRPWIWRCHIDLSSPNRRVW 126 (372)
T ss_pred CCHHHHHHHHHHHHHHhcccc---cc-----------CCCCEEEECCCCchhHHHhhhcCCCeEEEEeeeecCCCcHHHH
Confidence 445577888888887766421 11 147999999999887776654423222 3444321
Q ss_pred -HHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhh---cCchhhhhc----CCCeEEEEEcCccc
Q psy2719 251 -YCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLA---ENAPENLKD----ENLKVILGVDRLDY 322 (808)
Q Consensus 251 -~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~---~~~~~~~~~----~~~~iil~V~Rl~~ 322 (808)
+.+.++..++.++... ... +...-...++ ++|+|||+....... ......+++ .++++|++|||+++
T Consensus 127 ~~~~~~~~~~d~~i~~~--~~~--~~~~~~~~~~-vipngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~ 201 (372)
T cd03792 127 DFLQPYIEDYDAAVFHL--PEY--VPPQVPPRKV-IIPPSIDPLSGKNRELSPADIEYILEKYGIDPERPYITQVSRFDP 201 (372)
T ss_pred HHHHHHHHhCCEEeecH--HHh--cCCCCCCceE-EeCCCCCCCccccCCCCHHHHHHHHHHhCCCCCCcEEEEEecccc
Confidence 2222332222222111 010 1111112233 899999975421111 011122222 57889999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCC-CCHHHH
Q psy2719 323 TKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGC-IGQEEL 401 (808)
Q Consensus 323 ~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~-v~~~el 401 (808)
.||++.+++|++.+.++.|++ .|+++|.+...+ ++..++. +++..+.+.. ..+.++... ++.+++
T Consensus 202 ~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~g~~~~-~~~~~~~---~~~~~~~~~~------~~v~~~~~~~~~~~~~ 267 (372)
T cd03792 202 WKDPFGVIDAYRKVKERVPDP----QLVLVGSGATDD-PEGWIVY---EEVLEYAEGD------PDIHVLTLPPVSDLEV 267 (372)
T ss_pred ccCcHHHHHHHHHHHhhCCCC----EEEEEeCCCCCC-chhHHHH---HHHHHHhCCC------CCeEEEecCCCCHHHH
Confidence 999999999999998887775 488888654221 2222222 2222222211 135555333 489999
Q ss_pred HHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHH
Q psy2719 402 AALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDE 478 (808)
Q Consensus 402 ~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e 478 (808)
.++|++||+|++||.+||||++++|||||+ .|+|+|+.+|..+.+. +|+++++ .+++|++|.+++++ +++
T Consensus 268 ~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G----~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~i~~ll~~-~~~ 340 (372)
T cd03792 268 NALQRASTVVLQKSIREGFGLTVTEALWKG----KPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILYLLRD-PEL 340 (372)
T ss_pred HHHHHhCeEEEeCCCccCCCHHHHHHHHcC----CCEEEcCCCCchhhcccCCceEEeCC--cHHHHHHHHHHHcC-HHH
Confidence 999999999999999999999999999996 5699999988888773 4888874 57899999999985 456
Q ss_pred HHHHHHHHhHHH-hcCCHHHHHHHHHHHHHc
Q psy2719 479 RELRMSQLRHRE-QQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 479 ~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 508 (808)
+.++.+++++.+ ..++++..++++++.+++
T Consensus 341 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 341 RRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 666666777776 578999999999988765
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.4e-23 Score=232.94 Aligned_cols=211 Identities=17% Similarity=0.243 Sum_probs=153.0
Q ss_pred eEEEEEEeecCcCccccchhhcCc--hhh---hhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEE
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENA--PEN---LKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTF 349 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~--~~~---~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~l 349 (808)
...++.+||||||++.|.+..... ... ++. .++++|++|||+.+.||++.+|+||+++.+..+.. ++++
T Consensus 207 ~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l 284 (439)
T TIGR02472 207 QPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL 284 (439)
T ss_pred CccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE
Confidence 356889999999999997642211 111 111 46789999999999999999999998642211111 2222
Q ss_pred EEEEcCCCCChHHH----HHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhc----CeEEECCCCCCCC
Q psy2719 350 LQISVPSRTDVLEY----KALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDS----AIALVTPLRDGMN 421 (808)
Q Consensus 350 v~ig~~~~~~~~~~----~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~A----dv~v~~S~~EG~g 421 (808)
++|.+. +.+.+ .+..+++..++.+++. ...+.|.|.+++++++++|+.| |+||+||.+||||
T Consensus 285 -i~G~g~--~~~~l~~~~~~~~~~~~~~~~~~~l-------~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg 354 (439)
T TIGR02472 285 -VLGCRD--DIRKMESQQREVLQKVLLLIDRYDL-------YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFG 354 (439)
T ss_pred -EeCCcc--ccccccHHHHHHHHHHHHHHHHcCC-------CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcc
Confidence 334311 11111 1233344555555432 2335677999999999999988 9999999999999
Q ss_pred hhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHH
Q psy2719 422 LVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNH 497 (808)
Q Consensus 422 Lv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~ 497 (808)
++++|||||+ .|+|+|+.+|..+.+. +|++|+|.|++++|++|.++++. +++++++.++.++++ ..+||+.
T Consensus 355 ~~~lEAma~G----~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fsw~~ 429 (439)
T TIGR02472 355 LTLLEAAACG----LPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSD-SSQWQLWSRNGIEGVRRHYSWDA 429 (439)
T ss_pred cHHHHHHHhC----CCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999996 5699999988888774 59999999999999999999985 456666667777766 5679999
Q ss_pred HHHHHHHHH
Q psy2719 498 WMNSFLSSM 506 (808)
Q Consensus 498 W~~~~l~~l 506 (808)
-++++++.|
T Consensus 430 ~~~~~~~l~ 438 (439)
T TIGR02472 430 HVEKYLRIL 438 (439)
T ss_pred HHHHHHHHh
Confidence 888887765
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.9e-22 Score=222.02 Aligned_cols=213 Identities=19% Similarity=0.208 Sum_probs=165.5
Q ss_pred cCeEEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEE
Q psy2719 277 AGRTVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQI 352 (808)
Q Consensus 277 ~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~i 352 (808)
+....++.++|+|||.+.|.+... ...+++ .++++|+++||+.+.||++.+++|++++++++|+. ++.|+++
T Consensus 183 ~~~~~ki~vi~ngvd~~~~~~~~~--~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~--~~~l~iv 258 (405)
T TIGR03449 183 DADPDRIDVVAPGADLERFRPGDR--ATERARLGLPLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDR--NLRVIVV 258 (405)
T ss_pred CCChhhEEEECCCcCHHHcCCCcH--HHHHHhcCCCCCCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCc--ceEEEEE
Confidence 334568899999999988865321 112221 46789999999999999999999999999988873 4778888
Q ss_pred EcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhcc
Q psy2719 353 SVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQI 432 (808)
Q Consensus 353 g~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~ 432 (808)
|.+.....+. .+++++++.+.+. .+.+.+.|.++.+++..+|+.||++++||..||||++++|||||+
T Consensus 259 G~~~~~g~~~----~~~l~~~~~~~~l-------~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G- 326 (405)
T TIGR03449 259 GGPSGSGLAT----PDALIELAAELGI-------ADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACG- 326 (405)
T ss_pred eCCCCCcchH----HHHHHHHHHHcCC-------CceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcC-
Confidence 8654221122 2344555555432 234567799999999999999999999999999999999999995
Q ss_pred CCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 433 REPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 433 ~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
.|+|+|..+|..+.+. .|++++|.|++++|++|.++++. ++.+.+...++++.++.++|+.-++++++.+.++
T Consensus 327 ---~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~-~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 327 ---TPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDD-PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred ---CCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 5689999888887774 48999999999999999999984 4555555666777788899999999888777653
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.1e-22 Score=229.92 Aligned_cols=202 Identities=16% Similarity=0.194 Sum_probs=150.2
Q ss_pred eEEEEEEeecCcCccccchhhcC-----------------chhhhhc------CCCeEEEEEcCccccCChHHHHHHHHH
Q psy2719 279 RTVHVKALPIGIPFERFVQLAEN-----------------APENLKD------ENLKVILGVDRLDYTKGLVHRIKAFER 335 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~-----------------~~~~~~~------~~~~iil~V~Rl~~~KGi~~~l~A~~~ 335 (808)
+..++.+||||||++.|.|.... ...++++ .++++|++|||+.+.||++.+++|+++
T Consensus 236 ~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 315 (473)
T TIGR02095 236 RSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPE 315 (473)
T ss_pred cCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHH
Confidence 34688999999999998764211 0112222 267899999999999999999999999
Q ss_pred HHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECC
Q psy2719 336 LLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTP 415 (808)
Q Consensus 336 ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S 415 (808)
+.++. +.|+++|.+. + ++++++++++.+.+. .+.++ +..+.+++..+|++||++++||
T Consensus 316 l~~~~------~~lvi~G~g~----~---~~~~~l~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aDv~l~pS 373 (473)
T TIGR02095 316 LLELG------GQLVVLGTGD----P---ELEEALRELAERYPG--------NVRVI-IGYDEALAHLIYAGADFILMPS 373 (473)
T ss_pred HHHcC------cEEEEECCCC----H---HHHHHHHHHHHHCCC--------cEEEE-EcCCHHHHHHHHHhCCEEEeCC
Confidence 87642 4578777432 2 345566666644321 24443 4568888899999999999999
Q ss_pred CCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---------ceEEECCCCHHHHHHHHHHHhCC---CHHHHHHHH
Q psy2719 416 LRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---------EALLVNPYEIDAAANVLHRALCM---PRDERELRM 483 (808)
Q Consensus 416 ~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---------~~llvnP~d~~~lA~ai~~~L~~---~~~e~~~r~ 483 (808)
.+||||++++|||+|+ .|+|+|+.+|..+.+. +|++++|.|+++++++|.+++.+ .++.++++.
T Consensus 374 ~~E~~gl~~lEAma~G----~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~ 449 (473)
T TIGR02095 374 RFEPCGLTQLYAMRYG----TVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQ 449 (473)
T ss_pred CcCCcHHHHHHHHHCC----CCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999999999999995 5799999999998873 48999999999999999999873 233333333
Q ss_pred HHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 484 SQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 484 ~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
.+.. .+.+||+.-++++++..++
T Consensus 450 ~~~~--~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 450 KNAM--SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred HHHh--ccCCCcHHHHHHHHHHHHh
Confidence 3322 3578999999888876654
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-22 Score=230.35 Aligned_cols=203 Identities=10% Similarity=0.122 Sum_probs=150.3
Q ss_pred eEEEEEEeecCcCccccchhhcCc-----------------hhhhhc------CCCeEEEEEcCccccCChHHHHHHHHH
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENA-----------------PENLKD------ENLKVILGVDRLDYTKGLVHRIKAFER 335 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~-----------------~~~~~~------~~~~iil~V~Rl~~~KGi~~~l~A~~~ 335 (808)
+..++.+||||||++.|.|..... ..++++ .+.++|++|||+.+.||++.+++|+.+
T Consensus 252 ~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~ 331 (489)
T PRK14098 252 RKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEK 331 (489)
T ss_pred cCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHH
Confidence 356899999999999998643210 011111 356899999999999999999999999
Q ss_pred HHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECC
Q psy2719 336 LLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTP 415 (808)
Q Consensus 336 ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S 415 (808)
+++. ++.|+++|.+. . .+++++++++.+... .|. +.+.++.+++..+|++||+||+||
T Consensus 332 l~~~------~~~lvivG~G~---~----~~~~~l~~l~~~~~~--------~V~-~~g~~~~~~~~~~~a~aDi~l~PS 389 (489)
T PRK14098 332 LVEL------DIQLVICGSGD---K----EYEKRFQDFAEEHPE--------QVS-VQTEFTDAFFHLAIAGLDMLLMPG 389 (489)
T ss_pred HHhc------CcEEEEEeCCC---H----HHHHHHHHHHHHCCC--------CEE-EEEecCHHHHHHHHHhCCEEEeCC
Confidence 8753 35588888432 1 245566666655421 243 457789999999999999999999
Q ss_pred CCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-------ceEEECCCCHHHHHHHHHHHhCC--CHHHHHHHHHHH
Q psy2719 416 LRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-------EALLVNPYEIDAAANVLHRALCM--PRDERELRMSQL 486 (808)
Q Consensus 416 ~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-------~~llvnP~d~~~lA~ai~~~L~~--~~~e~~~r~~~~ 486 (808)
..||||++.+|||+|+ .|+|++..+|..+.+. +|++|+|.|+++++++|.+++.+ .++.+++...+.
T Consensus 390 ~~E~~Gl~~lEAma~G----~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~ 465 (489)
T PRK14098 390 KIESCGMLQMFAMSYG----TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA 465 (489)
T ss_pred CCCCchHHHHHHHhCC----CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9999999999999995 5689999989887762 59999999999999999998742 222222222222
Q ss_pred hHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 487 RHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 487 ~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
..+.+||+.-++++++..+++
T Consensus 466 --~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 466 --MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred --hcCCCChHHHHHHHHHHHHHH
Confidence 235789998888888776654
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-21 Score=227.74 Aligned_cols=211 Identities=17% Similarity=0.219 Sum_probs=152.2
Q ss_pred EEEEEeecCcCccccchhhcCchh---h--------------hh------cCCCeEEEEEcCccccCChHHHHHHHHHHH
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPE---N--------------LK------DENLKVILGVDRLDYTKGLVHRIKAFERLL 337 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~---~--------------~~------~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll 337 (808)
.++.++|+|+|++.|.+......+ . ++ +.++++|++|||+++.||++.+++||.++.
T Consensus 497 ~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~ 576 (784)
T TIGR02470 497 PKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSP 576 (784)
T ss_pred CCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhH
Confidence 478999999999998764321110 0 01 146789999999999999999999998764
Q ss_pred HhCCCccCcEEEEEEEcCCCC---ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCC-CCHHHHHHHHH----hcC
Q psy2719 338 EKHPEYVEKVTFLQISVPSRT---DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGC-IGQEELAALYR----DSA 409 (808)
Q Consensus 338 ~~~p~~~~~v~lv~ig~~~~~---~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~-v~~~el~aly~----~Ad 409 (808)
+.. ..+.|+++|.+... ...+..+..+++.+++.+.+.. + .|. +.|. .+..++..+|+ .+|
T Consensus 577 ~l~----~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~----g--~V~-flG~~~~~~~~~elyr~iAd~ad 645 (784)
T TIGR02470 577 KLR----ELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLH----G--QIR-WIGAQLNRVRNGELYRYIADTKG 645 (784)
T ss_pred hhC----CCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCC----C--eEE-EccCcCCcccHHHHHHHhhccCc
Confidence 332 34568888864321 1112222345566666665421 1 344 4565 35666667776 247
Q ss_pred eEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhC---CCHHHHHHHH
Q psy2719 410 IALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALC---MPRDERELRM 483 (808)
Q Consensus 410 v~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~---~~~~e~~~r~ 483 (808)
+||+||.+||||||++|||||| .|+|+|..+|..+.+. +|++|+|.|++++|++|.++++ ..++.+++..
T Consensus 646 VfV~PS~~EpFGLvvLEAMAcG----lPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms 721 (784)
T TIGR02470 646 IFVQPALYEAFGLTVLEAMTCG----LPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKIS 721 (784)
T ss_pred EEEECCcccCCCHHHHHHHHcC----CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 9999999999999999999996 5699999999999884 5999999999999999998863 2455555566
Q ss_pred HHHhHHH-hcCCHHHHHHHHHHHH
Q psy2719 484 SQLRHRE-QQLDVNHWMNSFLSSM 506 (808)
Q Consensus 484 ~~~~~~v-~~~~~~~W~~~~l~~l 506 (808)
.++++++ +.+||...++++++..
T Consensus 722 ~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 722 QGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHH
Confidence 6666666 6789999999988765
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.3e-22 Score=228.12 Aligned_cols=215 Identities=16% Similarity=0.183 Sum_probs=145.1
Q ss_pred HhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHH
Q psy2719 534 LNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVL 613 (808)
Q Consensus 534 ~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l 613 (808)
++-|+ .+.++|++|+||||++ +++.++++++++|++|+++
T Consensus 301 ~~~~~--~~iKLIa~DLDGTLLn-----~d~~Is~~t~eAI~kl~ek--------------------------------- 340 (580)
T PLN02887 301 LRFYK--PKFSYIFCDMDGTLLN-----SKSQISETNAKALKEALSR--------------------------------- 340 (580)
T ss_pred hhhhc--cCccEEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHC---------------------------------
Confidence 45554 3678999999999998 3457999999999999998
Q ss_pred HHHhCCCCCeEEEEeCCChhhHHHhcC---cc-c-------eEEEcccceeEecCCC-ceeecCCChhHHHHHHHHHHHH
Q psy2719 614 ERLANMPDVNIGIISGRTLENLMKMVN---IE-K-------VTYAGSHGLEILHPDG-TKFVHPVPKEYAEKLRQLIKAL 681 (808)
Q Consensus 614 ~~l~~~pg~~v~I~SGR~~~~l~~~~~---~~-~-------~~li~~nG~~i~~~~~-~~~~~~~~~~~~~~v~~i~~~~ 681 (808)
|+.|+|+|||++..+...+. +. . .+.|+.||+.|++.++ ..+...++.+ .+.++++.+
T Consensus 341 -------Gi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~L~~e---~v~eIi~~~ 410 (580)
T PLN02887 341 -------GVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQGLLVYGRQGREIYRSNLDQE---VCREACLYS 410 (580)
T ss_pred -------CCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecCeEEEECCCcEEEEEeCCHH---HHHHHHHHH
Confidence 99999999999998877653 21 1 1456789999986443 3566778775 566666655
Q ss_pred Hhhc------cCCCcEEEecCcEEE-EE--cCc-----C-Ch-hh--------------HHHHHHHHHHHHH-hc--Cee
Q psy2719 682 QDEV------CHDGAWIENKGVLLT-FH--YRE-----T-PI-ER--------------REYIIDRASQIFL-EA--GFE 728 (808)
Q Consensus 682 ~~~~------~~~g~~ie~k~~~~~-~~--~~~-----~-~~-~~--------------~~~~~~~~~~~~~-~~--~~~ 728 (808)
.+.- ...+.+......... .+ +.. . +. +. .+.....+.+.+. .+ .+.
T Consensus 411 ~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~ 490 (580)
T PLN02887 411 LEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRAN 490 (580)
T ss_pred HHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEE
Confidence 4420 011122110000000 00 000 0 00 00 0011112222222 12 244
Q ss_pred E-EccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccc
Q psy2719 729 P-HNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQG 802 (808)
Q Consensus 729 v-~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~ 802 (808)
+ .++..++||+|+ ++|||.||+.|+++ +||+.+ +||||| |++||+.++ ++|||+| .++||++|+||
T Consensus 491 v~~S~~~~lEI~p~-gvSKG~ALk~L~e~-lGI~~e---eviAFGDs~NDIeMLe~AG---~gVAMgNA~eeVK~~Ad~V 562 (580)
T PLN02887 491 VVQAQPDMLEIVPP-GTSKGNGVKMLLNH-LGVSPD---EIMAIGDGENDIEMLQLAS---LGVALSNGAEKTKAVADVI 562 (580)
T ss_pred EEEecCcEEEEecC-CCCHHHHHHHHHHH-cCCCHH---HEEEEecchhhHHHHHHCC---CEEEeCCCCHHHHHhCCEE
Confidence 4 466789999998 99999999999997 899975 899999 999999994 4599998 58999999999
Q ss_pred cCcC
Q psy2719 803 SNHT 806 (808)
Q Consensus 803 ~~~~ 806 (808)
|++|
T Consensus 563 T~sN 566 (580)
T PLN02887 563 GVSN 566 (580)
T ss_pred eCCC
Confidence 9876
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.1e-21 Score=212.64 Aligned_cols=207 Identities=19% Similarity=0.253 Sum_probs=160.2
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEc
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~ 354 (808)
...++.++|+|||.+.|.+........++. .++.+|+++||+.+.||++.+++|+..++++.|+...++.|+++|.
T Consensus 158 ~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~ 237 (374)
T TIGR03088 158 PPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD 237 (374)
T ss_pred ChhhEEEeccCccccccCCCccchhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC
Confidence 456788999999999886543221111111 4678999999999999999999999999999887655678888874
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCC
Q psy2719 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIRE 434 (808)
Q Consensus 355 ~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~ 434 (808)
+. . ++++++++.+.+. ...+++.|. .+++..+|+.||++|+||..||||++++|||||+
T Consensus 238 g~-----~----~~~~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G--- 296 (374)
T TIGR03088 238 GP-----A----RGACEQMVRAAGL-------AHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG--- 296 (374)
T ss_pred Cc-----h----HHHHHHHHHHcCC-------cceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC---
Confidence 32 1 2344455444332 245666774 4689999999999999999999999999999996
Q ss_pred CceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHHc
Q psy2719 435 PGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 508 (808)
.|+|+|+.+|..+.+. +|++++|.|++++|++|.++++. ++++.....++++++ ..+++..-++++++..++
T Consensus 297 -~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 297 -LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred -CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 5699999988888774 49999999999999999999974 455666666677776 578999988888876654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.1e-22 Score=205.77 Aligned_cols=199 Identities=14% Similarity=0.173 Sum_probs=135.5
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|++|+||||++ ++..++++++++|++|++. |+
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~----------------------------------------G~ 37 (230)
T PRK01158 3 IKAIAIDIDGTITD-----KDRRLSLKAVEAIRKAEKL----------------------------------------GI 37 (230)
T ss_pred eeEEEEecCCCcCC-----CCCccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 36999999999998 3457999999999999987 99
Q ss_pred eEEEEeCCChhhHHHhcCc--cceEEEcccceeEecC--CCceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEec--C
Q psy2719 623 NIGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHP--DGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENK--G 696 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~--~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k--~ 696 (808)
.|+|+|||+...+.+.+.. .+.++|++||+.++.. +...+..+++ .+.++++.+.+........+... .
T Consensus 38 ~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (230)
T PRK01158 38 PVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIE-----ECEKAYSELKKRFPEASTSLTKLDPD 112 (230)
T ss_pred EEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchH-----HHHHHHHHHHHhccccceeeecCCcc
Confidence 9999999999888766531 1346899999999875 3234444443 23333333332210001111100 0
Q ss_pred c--EEEEEcCcCChhhHHHHHHHHHHHHHhcC--eeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe
Q psy2719 697 V--LLTFHYRETPIERREYIIDRASQIFLEAG--FEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG 772 (808)
Q Consensus 697 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G 772 (808)
. .....++..+ .+++.+.++.++ +.+..+..++||.|+ ++|||.|++.++++ +|++.+ ++++||
T Consensus 113 ~~~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~-~~i~~~---~~i~~G 180 (230)
T PRK01158 113 YRKTEVALRRTVP-------VEEVRELLEELGLDLEIVDSGFAIHIKSP-GVNKGTGLKKLAEL-MGIDPE---EVAAIG 180 (230)
T ss_pred cccceeeeccccc-------HHHHHHHHHHcCCcEEEEecceEEEEeeC-CCChHHHHHHHHHH-hCCCHH---HEEEEC
Confidence 0 0001111111 122333344333 445555568999998 99999999999997 899865 799999
Q ss_pred ----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 773 ----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 773 ----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
|++||+.++ ++|+|+| .+++|+.|+|++++|
T Consensus 181 D~~NDi~m~~~ag---~~vam~Na~~~vk~~a~~v~~~n 216 (230)
T PRK01158 181 DSENDLEMFEVAG---FGVAVANADEELKEAADYVTEKS 216 (230)
T ss_pred CchhhHHHHHhcC---ceEEecCccHHHHHhcceEecCC
Confidence 999999994 5699997 589999999999876
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-21 Score=207.38 Aligned_cols=201 Identities=13% Similarity=0.171 Sum_probs=137.6
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
..++||+|+||||++. +..++++++++|++|+++ |
T Consensus 6 ~~~lI~~DlDGTLL~~-----~~~i~~~~~~ai~~l~~~----------------------------------------G 40 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS-----HTYDWQPAAPWLTRLREA----------------------------------------Q 40 (271)
T ss_pred CCeEEEEeCccCCcCC-----CCcCcHHHHHHHHHHHHc----------------------------------------C
Confidence 4679999999999982 346889999999999988 9
Q ss_pred CeEEEEeCCChhhHHHhcC---ccceEEEcccceeEecCCC-------ceeecCCChhHHHHHHHHHHHHHhhccCCCcE
Q psy2719 622 VNIGIISGRTLENLMKMVN---IEKVTYAGSHGLEILHPDG-------TKFVHPVPKEYAEKLRQLIKALQDEVCHDGAW 691 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~---~~~~~li~~nG~~i~~~~~-------~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ 691 (808)
+.|+|+|||++..+..++. ....++|++||+.|+.+.+ ..+..+++.+ .+.++++.+.+.. +..
T Consensus 41 i~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~---~~~~i~~~~~~~~---~~~ 114 (271)
T PRK03669 41 VPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHG---EIRQVLNTLREKE---GFK 114 (271)
T ss_pred CeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHH---HHHHHHHHHHHhc---CCc
Confidence 9999999999999887764 3234699999999987532 1234456654 5666666554320 100
Q ss_pred EE-------------------------ecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCH
Q psy2719 692 IE-------------------------NKGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQ 746 (808)
Q Consensus 692 ie-------------------------~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~K 746 (808)
+. .......+.+.. ++ +...++.+.+...++.+..+..++||+|+ ++||
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~l~~~~~~~~~~~~~iEi~~~-g~sK 188 (271)
T PRK03669 115 FTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRD-SD----ERMAQFTARLAELGLQFVQGARFWHVLDA-SAGK 188 (271)
T ss_pred eeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecC-CH----HHHHHHHHHHHHCCCEEEecCeeEEEecC-CCCH
Confidence 00 000001111111 11 12233333333335666555579999998 9999
Q ss_pred HHHHHHHHHHhcCC---CCCcceeEEEEe----CHHHHHhccCCccEEEeCC-C-Cc-----cccccccccCcC
Q psy2719 747 GRASIHILRTMYGV---DWSERVRIIYAG----NEDAMLALQGIACTFRVDS-S-PT-----VKSSWKQGSNHT 806 (808)
Q Consensus 747 G~av~~ll~~~~~i---~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~-~~-----vk~~A~~~~~~~ 806 (808)
|+|+++|+++ +|+ +.+ ++|||| |++||+.++ ++|||+| . +. +|..|+|+|+..
T Consensus 189 g~al~~l~~~-lgi~~~~~~---~viafGDs~NDi~Ml~~ag---~gvAM~~~~~~~~~l~~~~~~~~~~~~~~ 255 (271)
T PRK03669 189 DQAANWLIAT-YQQLSGTRP---TTLGLGDGPNDAPLLDVMD---YAVVVKGLNREGVHLQDDDPARVYRTQRE 255 (271)
T ss_pred HHHHHHHHHH-HHhhcCCCc---eEEEEcCCHHHHHHHHhCC---EEEEecCCCCCCcccccccCCceEeccCC
Confidence 9999999997 899 764 899999 999999994 5699994 3 32 566899998753
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-21 Score=204.32 Aligned_cols=201 Identities=16% Similarity=0.252 Sum_probs=141.1
Q ss_pred EEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeEE
Q psy2719 546 LILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNIG 625 (808)
Q Consensus 546 i~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v~ 625 (808)
||+|+||||++ +...++++++++|++|+++ |+.++
T Consensus 1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~----------------------------------------g~~~~ 35 (254)
T PF08282_consen 1 IFSDLDGTLLN-----SDGKISPETIEALKELQEK----------------------------------------GIKLV 35 (254)
T ss_dssp EEEECCTTTCS-----TTSSSCHHHHHHHHHHHHT----------------------------------------TCEEE
T ss_pred cEEEECCceec-----CCCeeCHHHHHHHHhhccc----------------------------------------ceEEE
Confidence 68999999998 3456999999999999988 99999
Q ss_pred EEeCCChhhHHHhcCcc--ceEEEcccceeEecCCC-ceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEecCcEEEEE
Q psy2719 626 IISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDG-TKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFH 702 (808)
Q Consensus 626 I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~-~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~~~~ 702 (808)
++|||++..+.+++... ..++|++||+.+..+.+ ..+..+++.+ .+..+++.+.+. .-...+...+. ....
T Consensus 36 i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~---~~~~i~~~~~~~--~~~~~~~~~~~-~~~~ 109 (254)
T PF08282_consen 36 IATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSD---DVKKILKYLKEH--NISFFFYTDDD-IYIY 109 (254)
T ss_dssp EECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HH---HHHHHHHHHHHT--TCEEEEEESSE-EEES
T ss_pred EEccCcccccccccccccchhhhcccccceeeecccccchhhheecc---chhheeehhhhc--cccccccccee-eecc
Confidence 99999999988887632 25899999999944444 3456777765 566777776664 10111111111 0000
Q ss_pred cCcCCh-------------------h-------------hHHHHHHHHHHHHH-hc-C-ee-EEccCeEEEEeCCCCCCH
Q psy2719 703 YRETPI-------------------E-------------RREYIIDRASQIFL-EA-G-FE-PHNALMAIEAKPPVKWDQ 746 (808)
Q Consensus 703 ~~~~~~-------------------~-------------~~~~~~~~~~~~~~-~~-~-~~-v~~g~~~vEv~p~~~v~K 746 (808)
..... . ...+...++.+.+. .+ + +. +.++..++||.|+ ++||
T Consensus 110 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~-~vsK 187 (254)
T PF08282_consen 110 -ENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRSSPYFLEITPK-GVSK 187 (254)
T ss_dssp -STTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEET-TSSH
T ss_pred -cccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEecccceEEeeC-CCCH
Confidence 00000 0 00112233333222 22 2 23 4578899999998 9999
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
|.|++.|+++ +|++.+ ++++|| |++||+.+ |++|+|+| .+++|.+|+++++++
T Consensus 188 ~~ai~~l~~~-~~i~~~---~~~~~GD~~ND~~Ml~~~---~~~~am~na~~~~k~~a~~i~~~~ 245 (254)
T PF08282_consen 188 GSAIKYLLEY-LGISPE---DIIAFGDSENDIEMLELA---GYSVAMGNATPELKKAADYITPSN 245 (254)
T ss_dssp HHHHHHHHHH-HTTSGG---GEEEEESSGGGHHHHHHS---SEEEEETTS-HHHHHHSSEEESSG
T ss_pred HHHHHHHhhh-cccccc---eeEEeecccccHhHHhhc---CeEEEEcCCCHHHHHhCCEEecCC
Confidence 9999999986 899875 899999 99999999 45699997 589999999999875
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.7e-21 Score=221.03 Aligned_cols=201 Identities=17% Similarity=0.198 Sum_probs=155.5
Q ss_pred cCeEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCC
Q psy2719 277 AGRTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS 356 (808)
Q Consensus 277 ~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~ 356 (808)
+....++.++|||||++.|.+.... ....+.++|+++||+.+.||++.+++|++.+.++.|++ .|+++|.+.
T Consensus 263 g~~~~ki~vIpNgid~~~f~~~~~~----~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~----~l~IvG~g~ 334 (475)
T cd03813 263 GADPEKIRVIPNGIDPERFAPARRA----RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDA----EGWVIGPTD 334 (475)
T ss_pred CCCHHHeEEeCCCcCHHHcCCcccc----ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCe----EEEEECCCC
Confidence 4455678999999999988764321 01146789999999999999999999999998888875 477777432
Q ss_pred CCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCc
Q psy2719 357 RTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPG 436 (808)
Q Consensus 357 ~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g 436 (808)
.+ .++.+++++++.+++.. +.+.|.| .+++..+|+.||++|+||..||||++++|||||+ .
T Consensus 335 -~~----~~~~~e~~~li~~l~l~-------~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G----~ 395 (475)
T cd03813 335 -ED----PEYAEECRELVESLGLE-------DNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG----I 395 (475)
T ss_pred -cC----hHHHHHHHHHHHHhCCC-------CeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC----C
Confidence 11 24556777777776532 2344556 5788999999999999999999999999999996 5
Q ss_pred eEEEcCCCCCccccC---------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhc-CCHHHHHHHHHHH
Q psy2719 437 VLILSPFAGAGGMMH---------EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQ-LDVNHWMNSFLSS 505 (808)
Q Consensus 437 ~vVlS~~~G~~~~l~---------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l~~ 505 (808)
|+|+|+.+|+.+.+. .|++++|.|++++|++|.++++. ++.+.+..+++++++.+ ++++..+++|.+.
T Consensus 396 PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~l 473 (475)
T cd03813 396 PVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRRL 473 (475)
T ss_pred CEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 689999888877763 48999999999999999999984 55666666677777765 4777777777653
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.3e-21 Score=215.84 Aligned_cols=202 Identities=15% Similarity=0.232 Sum_probs=154.3
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCC
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRT 358 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~ 358 (808)
...++.++|+|+|.+.|.+.... ..+++++|+++||+.+.||++.+++|+..+.++.|++ .|+++|.+
T Consensus 166 ~~~k~~vi~ngvd~~~f~~~~~~-----~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~----~l~i~G~g--- 233 (398)
T cd03796 166 DPERVSVIPNAVDSSDFTPDPSK-----RDNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNV----RFIIGGDG--- 233 (398)
T ss_pred ChhhEEEEcCccCHHHcCCCccc-----CCCCceEEEEEeccchhcCHHHHHHHHHHHHhhCCCE----EEEEEeCC---
Confidence 34678899999999988753221 1146789999999999999999999999998888875 47777742
Q ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceE
Q psy2719 359 DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 359 ~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~v 438 (808)
+.. +++++++.+.+. .+.+.+.|.++.+++..+|+.||++++||..||||++++|||||+ .||
T Consensus 234 --~~~----~~l~~~~~~~~l-------~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G----~PV 296 (398)
T cd03796 234 --PKR----ILLEEMREKYNL-------QDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCG----LLV 296 (398)
T ss_pred --chH----HHHHHHHHHhCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcC----CCE
Confidence 222 334455544432 133445699999999999999999999999999999999999996 568
Q ss_pred EEcCCCCCccccC-c-eEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH-HHhcCCHHHHHHHHHHHHHcccc
Q psy2719 439 ILSPFAGAGGMMH-E-ALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRH-REQQLDVNHWMNSFLSSMGALDN 511 (808)
Q Consensus 439 VlS~~~G~~~~l~-~-~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~-~v~~~~~~~W~~~~l~~l~~~~~ 511 (808)
|+|..+|..+.+. + +++++| |.++++++|.+++.++.+.+ ....+.++ ..+.+++..-++++++..+++..
T Consensus 297 I~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~-~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 297 VSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEAISILRTGK-HDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred EECCCCCchhheeCCceeecCC-CHHHHHHHHHHHHhChhhhh-hHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 9999988888774 3 445554 99999999999998654333 33344444 44678999999999988887644
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.3e-21 Score=197.26 Aligned_cols=198 Identities=15% Similarity=0.175 Sum_probs=134.1
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
++|++|+||||++ +++.+++++.++|++|++. |+.
T Consensus 2 k~v~~DlDGTLl~-----~~~~i~~~~~~~i~~l~~~----------------------------------------g~~ 36 (215)
T TIGR01487 2 KLVAIDIDGTLTE-----PNRMISERAIEAIRKAEKK----------------------------------------GIP 36 (215)
T ss_pred cEEEEecCCCcCC-----CCcccCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 5899999999997 3457999999999999887 999
Q ss_pred EEEEeCCChhhHHHhcCc--cceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEecCcEEEE
Q psy2719 624 IGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTF 701 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~~~ 701 (808)
|+|+|||++..+..++.. .+.++|++||++++..++.....+....|...... ...+... ...... ......+
T Consensus 37 ~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~--~~~~~~~ 111 (215)
T TIGR01487 37 VSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEK-KKRFPRD--RLSNEY--PRASLVI 111 (215)
T ss_pred EEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhh-hhhhhhh--hccccc--ceeEEEE
Confidence 999999999988877642 12368999999999865443333322222110000 0000000 000000 0111111
Q ss_pred EcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHH
Q psy2719 702 HYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAM 777 (808)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf 777 (808)
.....+ .+.+.+.+...++.+..+..++||.|+ +++||.|+++++++ +|++.+ ++++|| |++||
T Consensus 112 ~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~ei~~~-~~~K~~~i~~l~~~-~~i~~~---~~i~iGDs~ND~~ml 179 (215)
T TIGR01487 112 MREGKD-------VDEVREIIKERGLNLVDSGFAIHIMKK-GVDKGVGVEKLKEL-LGIKPE---EVAAIGDSENDIDLF 179 (215)
T ss_pred ecCCcc-------HHHHHHHHHhCCeEEEecCceEEEecC-CCChHHHHHHHHHH-hCCCHH---HEEEECCCHHHHHHH
Confidence 111111 123333444456666555678999998 99999999999997 898864 799999 99999
Q ss_pred HhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 778 LALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 778 ~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+.++ ++|+|+| .+++|+.|+|+++++
T Consensus 180 ~~ag---~~vam~na~~~~k~~A~~v~~~~ 206 (215)
T TIGR01487 180 RVVG---FKVAVANADDQLKEIADYVTSNP 206 (215)
T ss_pred HhCC---CeEEcCCccHHHHHhCCEEcCCC
Confidence 9994 5599997 589999999999865
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.8e-21 Score=214.79 Aligned_cols=207 Identities=17% Similarity=0.166 Sum_probs=153.6
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcC-ccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDR-LDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVP 355 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~R-l~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~ 355 (808)
.++.++|+|||++.|.+........... .+.++|+++|| +.+.||++.+++|+..+.++.|+++ |+++|..
T Consensus 177 ~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~ 252 (396)
T cd03818 177 SRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGD 252 (396)
T ss_pred cceEEeCCCccccccCCCchhhhcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCC
Confidence 5788999999999997653221111111 36788999998 9999999999999999998888764 8878853
Q ss_pred CCCChH--HH-HHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhcc
Q psy2719 356 SRTDVL--EY-KALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQI 432 (808)
Q Consensus 356 ~~~~~~--~~-~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~ 432 (808)
....+. +. +.+++ ++..+++.+.+ . +.+.|.|.++.+++.++|+.||++++||..||||++++|||||+
T Consensus 253 ~~~~g~~~~~~~~~~~---~~~~~~~~~~~---~-~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G- 324 (396)
T cd03818 253 GVSYGAPPPDGESWKQ---HMLDELGGRLD---L-SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG- 324 (396)
T ss_pred CcccCCCCCCcccHHH---HHHHHhhcccC---c-ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC-
Confidence 211000 00 01222 22222322111 1 23456799999999999999999999999999999999999996
Q ss_pred CCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhc-CCHHHHHHHHH
Q psy2719 433 REPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQ-LDVNHWMNSFL 503 (808)
Q Consensus 433 ~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l 503 (808)
.|+|+|+.+|..+.+. +|++|+|.|++++|++|.+++++ ++++.+..+++++++.+ ++++.-+++|+
T Consensus 325 ---~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 325 ---CLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDD-PARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred ---CCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 5699999988888874 59999999999999999999985 45666667778888876 78777777665
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.8e-21 Score=217.96 Aligned_cols=196 Identities=17% Similarity=0.226 Sum_probs=153.2
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhc-----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEc
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKD-----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~-----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~ 354 (808)
..++.++|+|||.+.|.+.... ...+.+ +++++|+++||+.+.||++.+++|++++ |+ +.|+++|.
T Consensus 228 ~~kv~vi~nGvd~~~f~p~~~~-~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li~a~~~~----~~----~~l~ivG~ 298 (465)
T PLN02871 228 ANRIRVWNKGVDSESFHPRFRS-EEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERL----PG----ARLAFVGD 298 (465)
T ss_pred cCeEEEeCCccCccccCCcccc-HHHHHHhcCCCCCCeEEEEeCCCchhhhHHHHHHHHHhC----CC----cEEEEEeC
Confidence 4678899999999999764322 122211 3678999999999999999999988653 54 45887773
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCC
Q psy2719 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIRE 434 (808)
Q Consensus 355 ~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~ 434 (808)
++. ++++++++... +| .|.|.++.+++..+|+.||+||+||..||||++++|||||+
T Consensus 299 -----G~~----~~~l~~~~~~~----------~V-~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G--- 355 (465)
T PLN02871 299 -----GPY----REELEKMFAGT----------PT-VFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASG--- 355 (465)
T ss_pred -----ChH----HHHHHHHhccC----------Ce-EEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcC---
Confidence 222 34445554321 34 45799999999999999999999999999999999999996
Q ss_pred CceEEEcCCCCCccccC------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHH-HH
Q psy2719 435 PGVLILSPFAGAGGMMH------EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSS-MG 507 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l~------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~-l~ 507 (808)
.|+|+|..+|..+.+. +|++++|.|++++|++|.++++. ++.+.++.+++++++++++|...++++++. -.
T Consensus 356 -~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~ 433 (465)
T PLN02871 356 -VPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMGAAAREEVEKWDWRAATRKLRNEQYS 433 (465)
T ss_pred -CCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 5699999988877763 39999999999999999999974 556666667788888999999999999874 44
Q ss_pred cc
Q psy2719 508 AL 509 (808)
Q Consensus 508 ~~ 509 (808)
++
T Consensus 434 ~~ 435 (465)
T PLN02871 434 AA 435 (465)
T ss_pred HH
Confidence 43
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=7e-21 Score=203.45 Aligned_cols=207 Identities=14% Similarity=0.142 Sum_probs=140.7
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.|+|++|+||||++ +++.++++++++|++++++ |+
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~ai~~~~~~----------------------------------------G~ 37 (272)
T PRK10530 3 YRVIALDLDGTLLT-----PKKTILPESLEALARAREA----------------------------------------GY 37 (272)
T ss_pred ccEEEEeCCCceEC-----CCCccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 46999999999998 3457999999999999998 99
Q ss_pred eEEEEeCCChhhHHHhcCc--cceEEEcccceeEecC-CCc-eeecCCChhHHHHHHHHHHHHHhhc-----c-CCCcEE
Q psy2719 623 NIGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHP-DGT-KFVHPVPKEYAEKLRQLIKALQDEV-----C-HDGAWI 692 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~-~~~-~~~~~~~~~~~~~v~~i~~~~~~~~-----~-~~g~~i 692 (808)
.|+|+|||++..+...+.. ...++|++||+.+++. ++. .+..+++.+ .+.++++.+.+.- . ..+.+.
T Consensus 38 ~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~ 114 (272)
T PRK10530 38 KVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPLPVQ---QALQVIEMLDEHQIHGLMYVDDAMLY 114 (272)
T ss_pred EEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCCCHH---HHHHHHHHHHhCCcEEEEEcCCceEe
Confidence 9999999999988777642 1246899999999964 333 455677765 5666766665430 0 011111
Q ss_pred EecCc----------EEEE----EcCcCChhhHH------------------HHHHHHH-HHHHhcCeeE-EccCeEEEE
Q psy2719 693 ENKGV----------LLTF----HYRETPIERRE------------------YIIDRAS-QIFLEAGFEP-HNALMAIEA 738 (808)
Q Consensus 693 e~k~~----------~~~~----~~~~~~~~~~~------------------~~~~~~~-~~~~~~~~~v-~~g~~~vEv 738 (808)
..... .+.. .+...++ ..+ +..+.+. .+.+.+++.+ .++..++||
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei 193 (272)
T PRK10530 115 EHPTGHVIRTLNWAQTLPPEQRPTFTQVDS-LAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDI 193 (272)
T ss_pred cCchHHHHHHhhhhhccchhcccceEEccc-HHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEE
Confidence 11000 0000 0000000 000 0111111 2223345443 345578999
Q ss_pred eCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 739 KPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 739 ~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
.|+ +++||.|+++++++ +|++.+ ++++|| |++||+.++ ++|+|+| .+++|+.|+|+++++
T Consensus 194 ~~~-~~~K~~~l~~l~~~-~gi~~~---e~i~~GD~~NDi~m~~~ag---~~vamgna~~~lk~~Ad~v~~~n 258 (272)
T PRK10530 194 ARK-GNSKGKRLTQWVEA-QGWSMK---NVVAFGDNFNDISMLEAAG---LGVAMGNADDAVKARADLVIGDN 258 (272)
T ss_pred ecC-CCChHHHHHHHHHH-cCCCHH---HeEEeCCChhhHHHHHhcC---ceEEecCchHHHHHhCCEEEecC
Confidence 998 99999999999997 899875 799999 999999995 4599997 588999999999876
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-21 Score=198.99 Aligned_cols=196 Identities=15% Similarity=0.187 Sum_probs=132.9
Q ss_pred EEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeEE
Q psy2719 546 LILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNIG 625 (808)
Q Consensus 546 i~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v~ 625 (808)
|++|+||||++ +...++++++++|++|++. |+.|+
T Consensus 1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~----------------------------------------Gi~~~ 35 (225)
T TIGR01482 1 IASDIDGTLTD-----PNRAINESALEAIRKAESV----------------------------------------GIPVV 35 (225)
T ss_pred CeEeccCccCC-----CCcccCHHHHHHHHHHHHC----------------------------------------CCEEE
Confidence 58999999998 3357999999999999987 99999
Q ss_pred EEeCCChhhHHHhcC-c-cceEEEcccceeEecCCC--ceeecCCChhHHHHHHH-HHHHHHhhccCCCcEEEecCcEEE
Q psy2719 626 IISGRTLENLMKMVN-I-EKVTYAGSHGLEILHPDG--TKFVHPVPKEYAEKLRQ-LIKALQDEVCHDGAWIENKGVLLT 700 (808)
Q Consensus 626 I~SGR~~~~l~~~~~-~-~~~~li~~nG~~i~~~~~--~~~~~~~~~~~~~~v~~-i~~~~~~~~~~~g~~ie~k~~~~~ 700 (808)
++|||+...+.+++. + ...++|++||+.++..++ ..+...++..|...... ....+... .. .+.. .....
T Consensus 36 ~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~--~~~~~ 110 (225)
T TIGR01482 36 LVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTFPFSRL--KV-QYPR--RASLV 110 (225)
T ss_pred EEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhcccchhhh--cc-cccc--ccceE
Confidence 999999998777653 1 245799999999987653 34555566554332111 10001000 00 0000 01111
Q ss_pred EEcCcCChhhHHHHHHHHHHHHHhcC--eeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CH
Q psy2719 701 FHYRETPIERREYIIDRASQIFLEAG--FEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NE 774 (808)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~ 774 (808)
......++ +.+.+.++.++ +.+.++..++||+|+ ++|||.|+++++++ +|++.+ ++++|| |+
T Consensus 111 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ei~~~-~~~K~~~i~~l~~~-~~i~~~---~~i~~GD~~NDi 178 (225)
T TIGR01482 111 KMRYGIDV-------DTVREIIKELGLNLVAVDSGFDIHILPQ-GVNKGVAVKKLKEK-LGIKPG---ETLVCGDSENDI 178 (225)
T ss_pred EEeecCCH-------HHHHHHHHhcCceEEEecCCcEEEEeeC-CCCHHHHHHHHHHH-hCCCHH---HEEEECCCHhhH
Confidence 11111121 11222333333 333355679999998 99999999999997 899865 799999 99
Q ss_pred HHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 775 DAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 775 ~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+||+.++ ++|||+| .+++|+.|+||++++
T Consensus 179 ~m~~~ag---~~vam~Na~~~~k~~A~~vt~~~ 208 (225)
T TIGR01482 179 DLFEVPG---FGVAVANAQPELKEWADYVTESP 208 (225)
T ss_pred HHHHhcC---ceEEcCChhHHHHHhcCeecCCC
Confidence 9999994 5599998 589999999999876
|
catalyze the same reaction as SPP. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-20 Score=216.71 Aligned_cols=201 Identities=15% Similarity=0.193 Sum_probs=147.3
Q ss_pred eEEEEEEeecCcCccccchhhcCc-----------------hhhhhc------CCCeEEEEEcCccccCChHHHHHHHHH
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENA-----------------PENLKD------ENLKVILGVDRLDYTKGLVHRIKAFER 335 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~-----------------~~~~~~------~~~~iil~V~Rl~~~KGi~~~l~A~~~ 335 (808)
+..++.+||||||.+.|.+..... ..++++ .++++|+++||+.+.||++.+++|+++
T Consensus 241 ~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 320 (476)
T cd03791 241 RAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPE 320 (476)
T ss_pred ccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHH
Confidence 356899999999999987643210 011111 467899999999999999999999999
Q ss_pred HHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECC
Q psy2719 336 LLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTP 415 (808)
Q Consensus 336 ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S 415 (808)
+.++. +.|+++|.+. + .+++++++++.+.. ..++++.+. +.+++..+|+.||++++||
T Consensus 321 l~~~~------~~lvi~G~g~----~---~~~~~~~~~~~~~~--------~~v~~~~~~-~~~~~~~~~~~aDv~l~pS 378 (476)
T cd03791 321 LLELG------GQLVILGSGD----P---EYEEALRELAARYP--------GRVAVLIGY-DEALAHLIYAGADFFLMPS 378 (476)
T ss_pred HHHcC------cEEEEEecCC----H---HHHHHHHHHHHhCC--------CcEEEEEeC-CHHHHHHHHHhCCEEECCC
Confidence 87653 4577777531 1 34455566554431 145555554 5777889999999999999
Q ss_pred CCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---------ceEEECCCCHHHHHHHHHHHhCCC--HHHHHHHHH
Q psy2719 416 LRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---------EALLVNPYEIDAAANVLHRALCMP--RDERELRMS 484 (808)
Q Consensus 416 ~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---------~~llvnP~d~~~lA~ai~~~L~~~--~~e~~~r~~ 484 (808)
.+||||++.+|||+|+ .|+|+|+.+|..+.+. +|++|+|.|+++++++|.+++++. ++++.+..+
T Consensus 379 ~~E~~gl~~lEAma~G----~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~ 454 (476)
T cd03791 379 RFEPCGLTQMYAMRYG----TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQR 454 (476)
T ss_pred CCCCCcHHHHHHhhCC----CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 9999999999999995 5689999999988883 599999999999999999998642 233333333
Q ss_pred HHhHHHhcCCHHHHHHHHHHHHH
Q psy2719 485 QLRHREQQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 485 ~~~~~v~~~~~~~W~~~~l~~l~ 507 (808)
+.. ...++|+.-++++++..+
T Consensus 455 ~~~--~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 455 NAM--AQDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHh--ccCCChHHHHHHHHHHHh
Confidence 222 235788888887776543
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=209.51 Aligned_cols=207 Identities=17% Similarity=0.199 Sum_probs=157.5
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEc
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~ 354 (808)
...++.++|+|+|++.|.+... ...+++ .++++|+++||+.+.||++.+++|++++. ++ +.|+++|.
T Consensus 167 ~~~~i~vi~ng~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~---~~----~~l~i~g~ 237 (388)
T TIGR02149 167 DPEKVHVIYNGIDTKEYKPDDG--NVVLDRYGIDRSRPYILFVGRITRQKGVPHLLDAVHYIP---KD----VQVVLCAG 237 (388)
T ss_pred CcceEEEecCCCChhhcCCCch--HHHHHHhCCCCCceEEEEEcccccccCHHHHHHHHHHHh---hc----CcEEEEeC
Confidence 3467889999999988865321 122222 46679999999999999999999999874 23 33666653
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCC
Q psy2719 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIRE 434 (808)
Q Consensus 355 ~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~ 434 (808)
+.. . .++.+++++++..++... ..++++.+.++.+++..+|+.||++|+||..||||++++|||||+
T Consensus 238 g~~--~---~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G--- 304 (388)
T TIGR02149 238 APD--T---PEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACG--- 304 (388)
T ss_pred CCC--c---HHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcC---
Confidence 321 1 234455555555543321 246778889999999999999999999999999999999999995
Q ss_pred CceEEEcCCCCCccccC---ceEEECCCCH------HHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHH
Q psy2719 435 PGVLILSPFAGAGGMMH---EALLVNPYEI------DAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLS 504 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l~---~~llvnP~d~------~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~ 504 (808)
.|+|+|..+|..+.+. +|++++|.|. ++++++|.++++. ++++.++..++++.+ +.++|+..++++++
T Consensus 305 -~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 382 (388)
T TIGR02149 305 -TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELAKKMGIAGRKRAEEEFSWGSIAKKTVE 382 (388)
T ss_pred -CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 5699999988887773 4999999999 9999999999974 555555556666655 56899999999988
Q ss_pred HHHcc
Q psy2719 505 SMGAL 509 (808)
Q Consensus 505 ~l~~~ 509 (808)
.++++
T Consensus 383 ~y~~~ 387 (388)
T TIGR02149 383 MYRKV 387 (388)
T ss_pred HHHhh
Confidence 77653
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-20 Score=199.07 Aligned_cols=206 Identities=14% Similarity=0.205 Sum_probs=142.7
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
+|++|+||||++. ...++++++++|++|+++ |+.|
T Consensus 1 li~~DlDGTLl~~-----~~~i~~~~~~~i~~l~~~----------------------------------------G~~~ 35 (256)
T TIGR00099 1 LIFIDLDGTLLND-----DHTISPSTKEALAKLREK----------------------------------------GIKV 35 (256)
T ss_pred CEEEeCCCCCCCC-----CCccCHHHHHHHHHHHHC----------------------------------------CCeE
Confidence 5899999999983 357999999999999988 9999
Q ss_pred EEEeCCChhhHHHhcCc--cceEEEcccceeEecCC-CceeecCCChhHHHHHHHHHHHHHhhc------cCCCcEEEec
Q psy2719 625 GIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPD-GTKFVHPVPKEYAEKLRQLIKALQDEV------CHDGAWIENK 695 (808)
Q Consensus 625 ~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~------~~~g~~ie~k 695 (808)
+|+|||++..+...+.. ...++|++||+.++..+ +..+..+++.+ .++++++.+.+.. ...+.++...
T Consensus 36 ~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 112 (256)
T TIGR00099 36 VLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLD---LVEEILNFLKKHGLDVILYGDDSIYASKN 112 (256)
T ss_pred EEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHH---HHHHHHHHHHHcCcEEEEEeCCeEEecCC
Confidence 99999999988877642 22479999999999764 34566788875 5666666665430 0112222111
Q ss_pred CcE-EE----EEcCc---C-C-----hh-h-------HHHHHHHHHHHHHh--c--CeeE-EccCeEEEEeCCCCCCHHH
Q psy2719 696 GVL-LT----FHYRE---T-P-----IE-R-------REYIIDRASQIFLE--A--GFEP-HNALMAIEAKPPVKWDQGR 748 (808)
Q Consensus 696 ~~~-~~----~~~~~---~-~-----~~-~-------~~~~~~~~~~~~~~--~--~~~v-~~g~~~vEv~p~~~v~KG~ 748 (808)
... +. ..+.. . + .+ . .++...++.+.+.. + .+.+ .++..++||+|+ ++|||.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~-~~~K~~ 191 (256)
T TIGR00099 113 DPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSSGPYSIEITAK-GVSKGS 191 (256)
T ss_pred CcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCC-CCChHH
Confidence 000 00 00000 0 0 00 0 01112333333331 2 3544 567789999998 999999
Q ss_pred HHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 749 ASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 749 av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
|++.++++ +|++.+ ++++|| |++||+.++ ++++|+| .+++|+.|+|+++++
T Consensus 192 ~i~~~~~~-~~~~~~---~~~~~GD~~nD~~m~~~~~---~~~a~~na~~~~k~~a~~~~~~n 247 (256)
T TIGR00099 192 ALQSLAEA-LGISLE---DVIAFGDGMNDIEMLEAAG---YGVAMGNADEELKALADYVTDSN 247 (256)
T ss_pred HHHHHHHH-cCCCHH---HEEEeCCcHHhHHHHHhCC---ceeEecCchHHHHHhCCEEecCC
Confidence 99999996 899865 799999 999999994 4599997 588999999999875
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-19 Score=201.63 Aligned_cols=205 Identities=23% Similarity=0.312 Sum_probs=158.1
Q ss_pred EEEEEEeecCcCccccchhhcCchhh--hhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPEN--LKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS 356 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~--~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~ 356 (808)
..++.++|+|+|.+.|.+........ ... .++++|+++||+.+.||++.+++|+..+.++.|++ .|+++|.+.
T Consensus 186 ~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~----~l~i~G~~~ 261 (398)
T cd03800 186 PRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGIDTLIRAYAELPELRERA----NLVIVGGPR 261 (398)
T ss_pred ccccEEECCCCCccceecccchhhHHHhhccCCCCcEEEEEcccccccCHHHHHHHHHHHHHhCCCe----EEEEEECCC
Confidence 34588999999998886543211101 111 56789999999999999999999999998887765 588888644
Q ss_pred CCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCc
Q psy2719 357 RTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPG 436 (808)
Q Consensus 357 ~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g 436 (808)
....+ ....++++++.+.+.. +-+.+.|.++.+++..+|+.||++++||..||||++++|||||+ .
T Consensus 262 ~~~~~---~~~~~~~~~~~~~~~~-------~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G----~ 327 (398)
T cd03800 262 DDILA---MDEEELRELARELGVI-------DRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACG----L 327 (398)
T ss_pred Ccchh---hhhHHHHHHHHhcCCC-------ceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcC----C
Confidence 32221 2233455555554321 33557799999999999999999999999999999999999996 4
Q ss_pred eEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHH
Q psy2719 437 VLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFL 503 (808)
Q Consensus 437 ~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l 503 (808)
|+|+|+.+|..+.+. .|++++|.|+++++++|.+++++ +++++....++++++ +.++++..+++++
T Consensus 328 Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 328 PVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTD-PALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred CEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 689999988888774 49999999999999999999985 455666666677777 7889999988875
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=200.24 Aligned_cols=263 Identities=18% Similarity=0.203 Sum_probs=177.1
Q ss_pred CCCEEEEeccchHHHHHHHHhhc--CCE-EEeccHHH---HHHHH-HHHHHHhCce--ee---cCCeEEEEc-CeEEEEE
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQVA--YDF-VGFHIEDY---CLNFI-DCCCRRLGSR--VD---RNNMLVELA-GRTVHVK 284 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~~--~dl-igf~~~~~---~~~fl-~~~~~~l~~~--~~---~~~~~i~~~-gr~~~v~ 284 (808)
+.|+|++|.+|..++..+++... ..+ +..|.... .+.++ ..+.+..... .+ .+.+ +..+ -...++.
T Consensus 79 ~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~~ 157 (360)
T cd04951 79 KPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRLRMLAYRLTDFLSDLTTNVSKEALDYF-IASKAFNANKSF 157 (360)
T ss_pred CCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHHHHHHHHHHhhccCceEEEcHHHHHHH-HhccCCCcccEE
Confidence 37999999999887777665432 222 23343321 11111 1111111110 00 0000 1111 1345788
Q ss_pred EeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 285 ALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 285 v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
++|+|+|...|.+........+++ .++++++++||+.+.||++.+++|+.++.+++|++ .|+++|.+.
T Consensus 158 ~i~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~----~l~i~G~g~---- 229 (360)
T cd04951 158 VVYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDI----KLLIAGDGP---- 229 (360)
T ss_pred EEccccchhhcCcchHHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCe----EEEEEcCCC----
Confidence 999999998876543211122221 46789999999999999999999999999888765 477777422
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLIL 440 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVl 440 (808)
.. +++++.+.+.+. .+.+.+.|.. +++..+|+.||++++||..||||++++|||||+ .|+|+
T Consensus 230 -~~----~~~~~~~~~~~~-------~~~v~~~g~~--~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G----~PvI~ 291 (360)
T cd04951 230 -LR----ATLERLIKALGL-------SNRVKLLGLR--DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACE----LPVVA 291 (360)
T ss_pred -cH----HHHHHHHHhcCC-------CCcEEEeccc--ccHHHHHHhhceEEecccccCCChHHHHHHHcC----CCEEE
Confidence 22 233444444332 1223445654 678999999999999999999999999999996 56899
Q ss_pred cCCCCCccccC-ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHH
Q psy2719 441 SPFAGAGGMMH-EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 441 S~~~G~~~~l~-~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 507 (808)
|+.+|..+.+. +|++++|.|+++++++|.++++++++.+..+..+.....+.++++.+++++++-++
T Consensus 292 ~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 292 TDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred ecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 99888888775 59999999999999999999977766665555543334567899999998887653
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.85 E-value=9e-21 Score=193.82 Aligned_cols=190 Identities=24% Similarity=0.356 Sum_probs=136.4
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
||++|+||||++.. ...++++++++|++|.++ |+.+
T Consensus 1 li~~D~DgTL~~~~----~~~~~~~~~~~l~~l~~~----------------------------------------g~~~ 36 (204)
T TIGR01484 1 LLFFDLDGTLLDPN----AHELSPETIEALERLREA----------------------------------------GVKV 36 (204)
T ss_pred CEEEeCcCCCcCCC----CCcCCHHHHHHHHHHHHC----------------------------------------CCEE
Confidence 58999999999832 246899999999999988 8999
Q ss_pred EEEeCCChhhHHHhcCccceEEEcccceeEecCCCceeecCCChhHHHHH------HHHHHHHHhhccCCCcEEEecCcE
Q psy2719 625 GIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKL------RQLIKALQDEVCHDGAWIENKGVL 698 (808)
Q Consensus 625 ~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v------~~i~~~~~~~~~~~g~~ie~k~~~ 698 (808)
+|+|||+...+..++...+.+++++||++++.+++..+..+. ..|.+.+ ..++..+.+ ..++..++.+...
T Consensus 37 ~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~e~~~~~ 113 (204)
T TIGR01484 37 VLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPS-DVFEEILGIKEEIGAELKSLSE--HYVGTFIEDKAIA 113 (204)
T ss_pred EEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEccc-ccHHHHHHhhhhcCceeeeecc--ccccceeecccce
Confidence 999999999998888644578999999999986655554311 1122211 122222332 2567778888999
Q ss_pred EEEEcCcC--ChhhHHHHHHHHHHHHHh-cCeeEE-ccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe--
Q psy2719 699 LTFHYRET--PIERREYIIDRASQIFLE-AGFEPH-NALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG-- 772 (808)
Q Consensus 699 ~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~v~-~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G-- 772 (808)
+.++|+.. .+.....+...+...... .++.+. ++..++||+|+ +++||.|++.++++ ++++.. ++++||
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~-~~~K~~~~~~~~~~-~~~~~~---~~~~~GD~ 188 (204)
T TIGR01484 114 VAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPA-GVDKGSALQALLKE-LNGKRD---EILAFGDS 188 (204)
T ss_pred eeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecC-CCChHHHHHHHHHH-hCCCHH---HEEEEcCC
Confidence 99998875 111111222222222111 246666 78899999998 99999999999997 787754 799999
Q ss_pred --CHHHHHhccCCccEEEe
Q psy2719 773 --NEDAMLALQGIACTFRV 789 (808)
Q Consensus 773 --D~~Mf~~~~~~~~~vav 789 (808)
|++||+.++ . +|+|
T Consensus 189 ~nD~~~~~~~~-~--~vam 204 (204)
T TIGR01484 189 GNDEEMFEVAG-L--AVAV 204 (204)
T ss_pred HHHHHHHHHcC-C--ceEC
Confidence 999999985 3 4776
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.3e-20 Score=200.34 Aligned_cols=189 Identities=19% Similarity=0.287 Sum_probs=141.9
Q ss_pred eecCcCccccchhhcCchhhhhc-----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 286 LPIGIPFERFVQLAENAPENLKD-----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 286 ~p~GID~~~f~~~~~~~~~~~~~-----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
+|+|||++.|.+.....++.+++ .+..+|++|||+++.||++.+++|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~------ 191 (335)
T PHA01633 118 VFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH------ 191 (335)
T ss_pred eeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH------
Confidence 57899999997643211222221 4567899999999999999999999999999998766677776651
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEc--CCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIF--GCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~--~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~v 438 (808)
.. +++ ++ .. ..|.++. |.++.+++.++|+.||+||+||..||||++++|||||+ .|+
T Consensus 192 ~~-------~~~----l~----l~--~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G----~PV 250 (335)
T PHA01633 192 KQ-------FTQ----LE----VP--ANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG----TPV 250 (335)
T ss_pred HH-------HHH----cC----CC--CcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC----CCE
Confidence 11 111 11 11 1355442 67789999999999999999999999999999999996 568
Q ss_pred EEcCCCCCccccC---------------------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHH
Q psy2719 439 ILSPFAGAGGMMH---------------------EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNH 497 (808)
Q Consensus 439 VlS~~~G~~~~l~---------------------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~ 497 (808)
|+|+.+|..+..+ .|+++++.|++++|++|.+++.+++++. +..++++.+++++++.
T Consensus 251 Vas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~~--~~~~~~~~a~~f~~~~ 328 (335)
T PHA01633 251 IHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDREE--RSMKLKELAKKYDIRN 328 (335)
T ss_pred EEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChhh--hhHHHHHHHHhcCHHH
Confidence 8898876665422 1567889999999999999988764333 3445678889999988
Q ss_pred HHHHHH
Q psy2719 498 WMNSFL 503 (808)
Q Consensus 498 W~~~~l 503 (808)
-.++|+
T Consensus 329 ~~~~~~ 334 (335)
T PHA01633 329 LYTRFL 334 (335)
T ss_pred HHHHhh
Confidence 887775
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=204.62 Aligned_cols=205 Identities=14% Similarity=0.128 Sum_probs=152.0
Q ss_pred CeEEEEEEeecCcCccccchhhcCchhhhh----c--CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEE
Q psy2719 278 GRTVHVKALPIGIPFERFVQLAENAPENLK----D--ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQ 351 (808)
Q Consensus 278 gr~~~v~v~p~GID~~~f~~~~~~~~~~~~----~--~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ 351 (808)
-...++.+||||||+++|.+........+. . .+.++|++|+|+.+.||+..+|+|+.+++++.|++ .|++
T Consensus 359 ip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdi----rLvI 434 (578)
T PRK15490 359 LEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPAT----RFVL 434 (578)
T ss_pred CCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCe----EEEE
Confidence 456789999999999998774321111111 1 34578999999999999999999999999988875 4887
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhc
Q psy2719 352 ISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQ 431 (808)
Q Consensus 352 ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~ 431 (808)
+|.+ + .++++++++.+.+. .+-+.|.|+ .+++..+|+.||+||+||.+||||++++|||||+
T Consensus 435 VGdG-----~----~~eeLk~la~elgL-------~d~V~FlG~--~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~G 496 (578)
T PRK15490 435 VGDG-----D----LRAEAQKRAEQLGI-------LERILFVGA--SRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVG 496 (578)
T ss_pred EeCc-----h----hHHHHHHHHHHcCC-------CCcEEECCC--hhhHHHHHHhCCEEEEcccccCccHHHHHHHHhC
Confidence 8742 2 23455666655442 123455676 4689999999999999999999999999999996
Q ss_pred cCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCC--HHHHHHHHHHHhHHH-hcCCHHHHHHHHHHH
Q psy2719 432 IREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMP--RDERELRMSQLRHRE-QQLDVNHWMNSFLSS 505 (808)
Q Consensus 432 ~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~--~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~ 505 (808)
.|+|+|+.+|..+.+. +|++|+|.|++++++++..+..+. .+.+....+++++++ +.+|++.-++++++.
T Consensus 497 ----lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki 572 (578)
T PRK15490 497 ----VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKT 572 (578)
T ss_pred ----CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 5699999988888773 599999999999998874433221 122333445667766 468999999988887
Q ss_pred HHc
Q psy2719 506 MGA 508 (808)
Q Consensus 506 l~~ 508 (808)
++.
T Consensus 573 ~~~ 575 (578)
T PRK15490 573 IAS 575 (578)
T ss_pred HHh
Confidence 764
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.85 E-value=7e-20 Score=203.36 Aligned_cols=194 Identities=23% Similarity=0.246 Sum_probs=152.7
Q ss_pred CeEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 278 GRTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 278 gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
....++.++|+|+|.+.|.+.... .+.+.|+++||+.+.||++.+++|+..+.+++|++ .|+++|.+
T Consensus 162 ~~~~~i~vi~~g~d~~~~~~~~~~-------~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~l~ivG~g-- 228 (367)
T cd05844 162 FPPEKVHVHPIGVDTAKFTPATPA-------RRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEV----RLVIIGDG-- 228 (367)
T ss_pred CCHHHeEEecCCCCHHhcCCCCCC-------CCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCe----EEEEEeCc--
Confidence 345678899999999888653211 34568999999999999999999999998887765 47777732
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC------CCCCChhHHHHHHhc
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL------RDGMNLVAKEYVACQ 431 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~------~EG~gLv~~Eama~~ 431 (808)
+ ..+++++++.+.+. .+.+.+.|.++.+++..+|+.||++++||. .||||++++|||||+
T Consensus 229 ---~----~~~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G 294 (367)
T cd05844 229 ---P----LLAALEALARALGL-------GGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASG 294 (367)
T ss_pred ---h----HHHHHHHHHHHcCC-------CCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcC
Confidence 2 23445555555322 133467899999999999999999999997 599999999999995
Q ss_pred cCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHH
Q psy2719 432 IREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFL 503 (808)
Q Consensus 432 ~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l 503 (808)
.|+|+|+.+|..+.+. +|++++|.|+++++++|.++++. ++.+.+...++++++ ..++++.+++++.
T Consensus 295 ----~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 295 ----VPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLAD-PDLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred ----CCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 5699999988888773 59999999999999999999974 455555566677776 5689998888765
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=214.36 Aligned_cols=203 Identities=14% Similarity=0.104 Sum_probs=150.4
Q ss_pred cCeEEEEEEeecCcCccccchhhcCch---hhhhc--CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEE
Q psy2719 277 AGRTVHVKALPIGIPFERFVQLAENAP---ENLKD--ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQ 351 (808)
Q Consensus 277 ~gr~~~v~v~p~GID~~~f~~~~~~~~---~~~~~--~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ 351 (808)
+....++.+||||||++.|.+...... ..... .+.++|++|||+++.||++.+|+||.++++++|++ .|++
T Consensus 478 g~~~~kI~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~----~LvI 553 (694)
T PRK15179 478 GVDERRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKV----RFIM 553 (694)
T ss_pred CCChhHEEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCe----EEEE
Confidence 344568999999999988864221111 11111 34678999999999999999999999999998875 4888
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhc
Q psy2719 352 ISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQ 431 (808)
Q Consensus 352 ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~ 431 (808)
+|.+. .++++++++.+.+.. ..+.|.|.. +++..+|+.||+||+||.+||||++++|||||+
T Consensus 554 vG~G~---------~~~~L~~l~~~lgL~-------~~V~flG~~--~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G 615 (694)
T PRK15179 554 VGGGP---------LLESVREFAQRLGMG-------ERILFTGLS--RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSG 615 (694)
T ss_pred EccCc---------chHHHHHHHHHcCCC-------CcEEEcCCc--chHHHHHHhcCEEEeccccccchHHHHHHHHcC
Confidence 87432 234556666665432 345667875 478999999999999999999999999999995
Q ss_pred cCCCceEEEcCCCCCccccC---ceEEECCCCH--HHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHH
Q psy2719 432 IREPGVLILSPFAGAGGMMH---EALLVNPYEI--DAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSS 505 (808)
Q Consensus 432 ~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~--~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~ 505 (808)
.|||+|..+|..+.+. +|++|+|.|+ ++++++|.+++...... ....+++++++ +.+++..-++++++.
T Consensus 616 ----~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~-~~l~~~ar~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 616 ----VPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAAD-PGIARKAADWASARFSLNQMIASTVRC 690 (694)
T ss_pred ----CeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhcc-HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5689999888888884 4999998885 68999998888653222 22334556666 478888888877765
Q ss_pred H
Q psy2719 506 M 506 (808)
Q Consensus 506 l 506 (808)
.
T Consensus 691 Y 691 (694)
T PRK15179 691 Y 691 (694)
T ss_pred h
Confidence 4
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.8e-20 Score=193.69 Aligned_cols=200 Identities=18% Similarity=0.169 Sum_probs=135.5
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
+|++|+||||++.. ..+.+.++++|++|++. |+.|
T Consensus 1 li~~DlDGTll~~~-----~~~~~~~~~~i~~l~~~----------------------------------------g~~~ 35 (256)
T TIGR01486 1 WIFTDLDGTLLDPH-----GYDWGPAKEVLERLQEL----------------------------------------GIPV 35 (256)
T ss_pred CEEEcCCCCCcCCC-----CcCchHHHHHHHHHHHC----------------------------------------CCeE
Confidence 58999999999832 32344689999999887 9999
Q ss_pred EEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCCc-------eeecCCChhHHHHHHHHHHHHHhhccCCCcEEEe-
Q psy2719 625 GIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDGT-------KFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIEN- 694 (808)
Q Consensus 625 ~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~~-------~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~- 694 (808)
+++|||+...+..++... ..++|++||++|+..++. .....++. +.++++++.+.+.....-.....
T Consensus 36 ~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~---~~~~~il~~~~~~~~~~~~~~~~~ 112 (256)
T TIGR01486 36 IPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPY---EKIRARLEELSEELGFKFRGLGDL 112 (256)
T ss_pred EEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCH---HHHHHHHHHHHHHhCCCccchhhC
Confidence 999999999887776422 257999999999876542 23345554 35667776554320000000000
Q ss_pred ---------------------cCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHHHHH
Q psy2719 695 ---------------------KGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHI 753 (808)
Q Consensus 695 ---------------------k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av~~l 753 (808)
......+.. + .+....+.+.+...++.+..+..++||.|+ +++||.|++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~-~~~Kg~ai~~l 184 (256)
T TIGR01486 113 TDAEIAELTGLSRELAALAQRREYSETILW---S----EERRERFTEALVELGLEVTHGNRFYHVLGA-GSDKGKAANAL 184 (256)
T ss_pred CHHHHHHHhCcCHHHHHHHhhCccCCceec---C----hHHHHHHHHHHHHcCCEEEeCCceEEEecC-CCCHHHHHHHH
Confidence 000000000 1 112333444444445666555579999998 99999999999
Q ss_pred HHHhcCCC--CCcceeEEEEe----CHHHHHhccCCccEEEeCCC----Cccccc--c-ccccCcCC
Q psy2719 754 LRTMYGVD--WSERVRIIYAG----NEDAMLALQGIACTFRVDSS----PTVKSS--W-KQGSNHTM 807 (808)
Q Consensus 754 l~~~~~i~--~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~----~~vk~~--A-~~~~~~~~ 807 (808)
+++ +|++ .+ ++++|| |++||+.++ .+|||+|+ +++|+. | +|+|+++.
T Consensus 185 ~~~-~~i~~~~~---~~~a~GD~~ND~~Ml~~ag---~~vam~Na~~~~~~lk~~~~a~~~vt~~~~ 244 (256)
T TIGR01486 185 KQF-YNQPGGAI---KVVGLGDSPNDLPLLEVVD---LAVVVPGPNGPNVSLKPGDPGSFLLTPAPG 244 (256)
T ss_pred HHH-HhhcCCCc---eEEEEcCCHhhHHHHHHCC---EEEEeCCCCCCccccCccCCCcEEEcCCCC
Confidence 996 8988 54 899999 999999984 56999985 379998 5 59998763
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.8e-20 Score=195.27 Aligned_cols=204 Identities=14% Similarity=0.173 Sum_probs=137.5
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
|.+|++|+||||+++.+ .+..+++++.++++++.++ |+
T Consensus 1 ~~li~tDlDGTLl~~~~--~~~~~~~~~~~~i~~~~~~----------------------------------------gi 38 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD--GDNQALLRLNALLEDHRGE----------------------------------------DS 38 (249)
T ss_pred CeEEEEcCCCcCcCCCC--CChHHHHHHHHHHHHhhcc----------------------------------------Cc
Confidence 46899999999998532 2356789999999999887 89
Q ss_pred eEEEEeCCChhhHHHh---cCcc-ceEEEcccceeEecCCCc----eeecCCChhHH-HHHHHHHHHHHhhccCCCcEEE
Q psy2719 623 NIGIISGRTLENLMKM---VNIE-KVTYAGSHGLEILHPDGT----KFVHPVPKEYA-EKLRQLIKALQDEVCHDGAWIE 693 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~---~~~~-~~~li~~nG~~i~~~~~~----~~~~~~~~~~~-~~v~~i~~~~~~~~~~~g~~ie 693 (808)
.++++|||++..+..+ ++.. +..+|++||+.|+.++.. .|...+...|. +.+..+...+... +.....+
T Consensus 39 ~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~ 116 (249)
T TIGR01485 39 LLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIVVAITDKFEEL--KPQPDLE 116 (249)
T ss_pred eEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHHHHHHhcCccc--ccCCccc
Confidence 9999999999888777 3432 235889999999875421 11111111222 1233333333222 2333334
Q ss_pred ecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcC--eeE-EccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEE
Q psy2719 694 NKGVLLTFHYRETPIERREYIIDRASQIFLEAG--FEP-HNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIY 770 (808)
Q Consensus 694 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via 770 (808)
.+...+.+.+.. +...+..+++.+.+...+ +.+ .++..++||+|+ +++||.|+++++++ +|++.+ ++++
T Consensus 117 ~~~~k~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~-~~~K~~al~~l~~~-~~i~~~---~~i~ 188 (249)
T TIGR01485 117 QRPHKVSFFLDP---EAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQ-GSGKGQALQYLLQK-LAMEPS---QTLV 188 (249)
T ss_pred cCCeeEEEEech---hhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeC-CCChHHHHHHHHHH-cCCCcc---CEEE
Confidence 445556655322 111223455565555543 333 577889999998 99999999999996 898865 7999
Q ss_pred Ee----CHHHHHhccCCccEEEeCC-CCccccccc
Q psy2719 771 AG----NEDAMLALQGIACTFRVDS-SPTVKSSWK 800 (808)
Q Consensus 771 ~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~ 800 (808)
|| |++||+.++ +.+|+|+| .+++|+.|+
T Consensus 189 ~GD~~ND~~ml~~~~--~~~va~~na~~~~k~~~~ 221 (249)
T TIGR01485 189 CGDSGNDIELFEIGS--VRGVIVSNAQEELLQWYD 221 (249)
T ss_pred EECChhHHHHHHccC--CcEEEECCCHHHHHHHHH
Confidence 99 999999864 34599998 478887654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-19 Score=205.34 Aligned_cols=208 Identities=15% Similarity=0.174 Sum_probs=158.1
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
.++.++++|+|.+.|...... ...+++++++|||+.+.||+..+|+||++++++.++-..++.|+++|... .
T Consensus 243 ~~i~vvyp~vd~~~~~~~~~~-----~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~-~-- 314 (463)
T PLN02949 243 ERIKRVYPPCDTSGLQALPLE-----RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCR-N-- 314 (463)
T ss_pred CCeEEEcCCCCHHHcccCCcc-----ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCC-C--
Confidence 357788999998776322110 01345789999999999999999999999887544322345688888542 1
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLIL 440 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVl 440 (808)
++..++.+++++++.+.+.. ..+.|.|.++.+++.++|+.||+++.||..||||++++|||||+ .|+|+
T Consensus 315 ~~~~~~~~eL~~la~~l~L~-------~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G----~PVIa 383 (463)
T PLN02949 315 KEDEERLQKLKDRAKELGLD-------GDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAG----AVPIA 383 (463)
T ss_pred cccHHHHHHHHHHHHHcCCC-------CcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcC----CcEEE
Confidence 11223445666666665432 23455699999999999999999999999999999999999995 56999
Q ss_pred cCCCCCcc-ccC------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 441 SPFAGAGG-MMH------EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 441 S~~~G~~~-~l~------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
|..+|..+ .+. +|++++ |++++|++|.++++++++++.+..+++++++.+++++.-++++++.+...
T Consensus 384 ~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 384 HNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPI 457 (463)
T ss_pred eCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 99888653 332 377774 99999999999999877777777778888899999999999888887764
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-19 Score=200.26 Aligned_cols=175 Identities=22% Similarity=0.220 Sum_probs=131.4
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhh--c-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLK--D-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS 356 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~--~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~ 356 (808)
..++.++|+|+|.+.|.+.........+ . .++++|+++||+.+.||++.+++|+..+.+++|++ .++++|.+
T Consensus 158 ~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~----~l~ivG~g- 232 (358)
T cd03812 158 NKKFKVIPNGIDLEKFIFNEEIRKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNA----KLLLVGDG- 232 (358)
T ss_pred cccEEEEeccCcHHHcCCCchhhhHHHHcCCCCCCEEEEEEeccccccChHHHHHHHHHHHHhCCCe----EEEEEeCC-
Confidence 4678899999999887653221111111 1 56789999999999999999999999999888875 47777742
Q ss_pred CCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCc
Q psy2719 357 RTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPG 436 (808)
Q Consensus 357 ~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g 436 (808)
+.. +.+++++.+.+. .+.+.+.|. .+++..+|+.||++|+||..||||++++|||||+ .
T Consensus 233 ----~~~----~~~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G----~ 291 (358)
T cd03812 233 ----ELE----EEIKKKVKELGL-------EDKVIFLGV--RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASG----L 291 (358)
T ss_pred ----chH----HHHHHHHHhcCC-------CCcEEEecc--cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhC----C
Confidence 222 233344433321 223445565 5789999999999999999999999999999995 5
Q ss_pred eEEEcCCCCCccccCc--eEEECCCCHHHHHHHHHHHhCCCHHHHH
Q psy2719 437 VLILSPFAGAGGMMHE--ALLVNPYEIDAAANVLHRALCMPRDERE 480 (808)
Q Consensus 437 ~vVlS~~~G~~~~l~~--~llvnP~d~~~lA~ai~~~L~~~~~e~~ 480 (808)
|+|+|+.+|..+.+.+ +++..+.+++++|++|.++++.+...+.
T Consensus 292 PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~ 337 (358)
T cd03812 292 PCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRERS 337 (358)
T ss_pred CEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchhhh
Confidence 6999999998887753 6666667789999999999998764443
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-19 Score=189.94 Aligned_cols=204 Identities=20% Similarity=0.273 Sum_probs=130.8
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
+.++|++|+||||++ ++..++++++++|++++++ |
T Consensus 4 ~~klia~DlDGTLL~-----~~~~is~~~~~ai~~l~~~----------------------------------------G 38 (247)
T PTZ00174 4 KKTILLFDVDGTLTK-----PRNPITQEMKDTLAKLKSK----------------------------------------G 38 (247)
T ss_pred CCeEEEEECcCCCcC-----CCCCCCHHHHHHHHHHHHC----------------------------------------C
Confidence 357999999999998 4467999999999999998 9
Q ss_pred CeEEEEeCCChhhHHHhcCcc---c-eEEEcccceeEecCCCceeecC----CChhHHHHHHHHHHHHHhh---c---cC
Q psy2719 622 VNIGIISGRTLENLMKMVNIE---K-VTYAGSHGLEILHPDGTKFVHP----VPKEYAEKLRQLIKALQDE---V---CH 687 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~~~---~-~~li~~nG~~i~~~~~~~~~~~----~~~~~~~~v~~i~~~~~~~---~---~~ 687 (808)
+.|+|+|||++..+.+.++.. . .++|++||+.|+..++..+.++ ++.+ .+.++++...+. . ..
T Consensus 39 i~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~~~~i~~~~i~~~l~~~---~~~~i~~~~~~~~~~~~~~~~ 115 (247)
T PTZ00174 39 FKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKDGELFHSQSILKFLGEE---KLKKFINFCLRYIADLDIPVK 115 (247)
T ss_pred CEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEECCeEEEEEcchhcCCHH---HHHHHHHHHHHHHHhcCCccc
Confidence 999999999999998887632 2 3679999999987544444454 3444 344444433221 1 12
Q ss_pred CCcEEEecCcEEEEEcC--cCChhhH---------HHHHHHHHHHH-Hhc---CeeEE-ccCeEEEEeCCCCCCHHHHHH
Q psy2719 688 DGAWIENKGVLLTFHYR--ETPIERR---------EYIIDRASQIF-LEA---GFEPH-NALMAIEAKPPVKWDQGRASI 751 (808)
Q Consensus 688 ~g~~ie~k~~~~~~~~~--~~~~~~~---------~~~~~~~~~~~-~~~---~~~v~-~g~~~vEv~p~~~v~KG~av~ 751 (808)
.+.+++.........+. ....... .+....+.+.+ ..+ .+... ++..++||+|+ ++|||+||+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~-gvsKg~al~ 194 (247)
T PTZ00174 116 RGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPK-GWDKTYCLR 194 (247)
T ss_pred eeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeC-CCcHHHHHH
Confidence 23444322211111110 0000000 01112222222 222 22233 34579999998 999999999
Q ss_pred HHHHHhcCCCCCcceeEEEEe--------CHHHHHhccCCccEEEeCC-CCccccccccccC
Q psy2719 752 HILRTMYGVDWSERVRIIYAG--------NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSN 804 (808)
Q Consensus 752 ~ll~~~~~i~~~~~~~via~G--------D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~ 804 (808)
.|+++ . + +|+||| |++||+.++..| +.|+| .+.+|..|..+++
T Consensus 195 ~L~~~-~----~---eviafGD~~~~~~NDieMl~~~~~~g--~~v~n~~~~~~~~~~~~~~ 246 (247)
T PTZ00174 195 HLEND-F----K---EIHFFGDKTFEGGNDYEIYNDPRTIG--HSVKNPEDTIKILKELFLK 246 (247)
T ss_pred HHHhh-h----h---hEEEEcccCCCCCCcHhhhhcCCCce--EEeCCHHHHHHHHHHHhcC
Confidence 99986 2 2 799999 599999876455 55666 5789998876654
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.9e-19 Score=197.49 Aligned_cols=284 Identities=15% Similarity=0.158 Sum_probs=174.2
Q ss_pred CCCEEEEeccchHHHHHHHHhhc---CCEEEeccHHHHHH------------------------------HHHHH-----
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQVA---YDFVGFHIEDYCLN------------------------------FIDCC----- 259 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~~---~dligf~~~~~~~~------------------------------fl~~~----- 259 (808)
+.|+++.|||+.......+|+.. +-+..+|...+-|+ .+...
T Consensus 148 ~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~A 227 (590)
T cd03793 148 PAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCA 227 (590)
T ss_pred CCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHhhC
Confidence 58999999999999999998654 22334444443332 11110
Q ss_pred HHHhC-ceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcC----------chh-----hhhc----CCCeEEEE-Ec
Q psy2719 260 CRRLG-SRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAEN----------APE-----NLKD----ENLKVILG-VD 318 (808)
Q Consensus 260 ~~~l~-~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~----------~~~-----~~~~----~~~~iil~-V~ 318 (808)
++++. ++.++..+ ..+.+++..+ |+|||||++.|.+..+. ..+ +++. .+++++++ +|
T Consensus 228 d~fttVS~it~~E~-~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~G 305 (590)
T cd03793 228 HVFTTVSEITAYEA-EHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAG 305 (590)
T ss_pred CEEEECChHHHHHH-HHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEee
Confidence 01110 11111111 1123444333 89999999998764311 001 1221 36788888 89
Q ss_pred Cccc-cCChHHHHHHHHHHHHhCCCcc-CcEEEEEEEcCCCCC---------hHHHHHHHHHHHHHHHHHhcc-------
Q psy2719 319 RLDY-TKGLVHRIKAFERLLEKHPEYV-EKVTFLQISVPSRTD---------VLEYKALKDEMDQLVGRINGR------- 380 (808)
Q Consensus 319 Rl~~-~KGi~~~l~A~~~ll~~~p~~~-~~v~lv~ig~~~~~~---------~~~~~~l~~~l~~lv~~in~~------- 380 (808)
|+++ .||++.+|+|+.++-..-..-. +..|+..+..|+..+ .+-.++|++.++++..+|+.+
T Consensus 306 R~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~ 385 (590)
T cd03793 306 RYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALK 385 (590)
T ss_pred ccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhc
Confidence 9999 9999999999998865211111 122333344455433 122345666666665555544
Q ss_pred -------------------------------------------------------C-CCCCCccEEEEcCCCCH------
Q psy2719 381 -------------------------------------------------------F-SKPNWSPIRYIFGCIGQ------ 398 (808)
Q Consensus 381 -------------------------------------------------------~-g~~~~~~v~~~~~~v~~------ 398 (808)
| +..+...|+|...+++.
T Consensus 386 ~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g 465 (590)
T cd03793 386 GKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLG 465 (590)
T ss_pred cCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCC
Confidence 0 01122344444444432
Q ss_pred HHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCc----cccC----ceEEEC-------CCCHHH
Q psy2719 399 EELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAG----GMMH----EALLVN-------PYEIDA 463 (808)
Q Consensus 399 ~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~----~~l~----~~llvn-------P~d~~~ 463 (808)
.+...+|+.||+||+||++||||++++|||||+ .|+|+|..+|.. +.+. .|++|. +.++++
T Consensus 466 ~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G----~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~ 541 (590)
T cd03793 466 LDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQ 541 (590)
T ss_pred cchHHHhhhceEEEeccccCCCCcHHHHHHHcC----CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHH
Confidence 347788999999999999999999999999995 569999999883 3333 378887 566889
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHH
Q psy2719 464 AANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 464 lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 507 (808)
++++|.+.++++..++........+....++|.+-+..|++.-.
T Consensus 542 La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 542 LTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999976544433333333355667788887777766543
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.4e-19 Score=195.46 Aligned_cols=200 Identities=16% Similarity=0.204 Sum_probs=148.9
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEc
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~ 354 (808)
...++.++|+|+|...|.+.... ..+++ .++++++++||+.+.||++.+++|+.++.++ ++ +.|+++|.
T Consensus 163 ~~~~i~vi~n~~~~~~~~~~~~~--~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~a~~~l~~~-~~----~~l~i~G~ 235 (371)
T cd04962 163 ITKEIEVIPNFVDEDRFRPKPDE--ALKRRLGAPEGEKVLIHISNFRPVKRIDDVIRIFAKVRKE-VP----ARLLLVGD 235 (371)
T ss_pred CcCCEEEecCCcCHhhcCCCchH--HHHHhcCCCCCCeEEEEecccccccCHHHHHHHHHHHHhc-CC----ceEEEEcC
Confidence 34578899999998877653221 12111 5678999999999999999999999988655 33 34777764
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCC
Q psy2719 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIRE 434 (808)
Q Consensus 355 ~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~ 434 (808)
+. +. +++++++.+.+. .+.+.+.|.. +++..+|+.||++++||..||||++++|||+|+
T Consensus 236 g~-----~~----~~~~~~~~~~~~-------~~~v~~~g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g--- 294 (371)
T cd04962 236 GP-----ER----SPAERLARELGL-------QDDVLFLGKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMACG--- 294 (371)
T ss_pred Cc-----CH----HHHHHHHHHcCC-------CceEEEecCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC---
Confidence 32 22 233444444332 1223445654 579999999999999999999999999999996
Q ss_pred CceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH-HhcCCHHHHHHHHHHHHHc
Q psy2719 435 PGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHR-EQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~-v~~~~~~~W~~~~l~~l~~ 508 (808)
.|+|+|+.+|..+.+. +|++++|.|+++++++|.++++. ++++.+...++++. ...+++...++++++.+++
T Consensus 295 -~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 295 -VPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLED-DELWQEFSRAARNRAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred -CCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 5699999998888774 49999999999999999999974 44555555566666 5678999999888877654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.9e-19 Score=195.35 Aligned_cols=254 Identities=20% Similarity=0.184 Sum_probs=170.0
Q ss_pred CCCEEEEeccchHHHHHHHHhh-cCCEE-EeccHH----HHHHHHHHHHHHhCc-eeecCCeEEEEcCeEEEEEEeecCc
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQV-AYDFV-GFHIED----YCLNFIDCCCRRLGS-RVDRNNMLVELAGRTVHVKALPIGI 290 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~-~~dli-gf~~~~----~~~~fl~~~~~~l~~-~~~~~~~~i~~~gr~~~v~v~p~GI 290 (808)
..|+|++|..+......+..+. ..-++ ..|... ..+.++..++.++.. +...+.+.-.++....++.++|+|+
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~vi~~s~~~~~~~~~~~~~~~~k~~~i~ngi 157 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNFRYNAIMARGDRVIAVSNFIADHIRENYGVDPDRIRVIPRGV 157 (355)
T ss_pred CCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHHHHHHHHHhcCEEEEeCHHHHHHHHHhcCCChhhEEEecCCc
Confidence 3799999997765554443332 22222 233222 122233333332221 1111111112333456888999999
Q ss_pred CccccchhhcCchh---hhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHH
Q psy2719 291 PFERFVQLAENAPE---NLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEY 363 (808)
Q Consensus 291 D~~~f~~~~~~~~~---~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~ 363 (808)
|.+.|.+....... .+++ .+.++|+++||+.+.||++.+++|+..+.++.|++ .|+++|.+.. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~----~l~ivG~~~~-----~ 228 (355)
T cd03819 158 DLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDV----HLLIVGDAQG-----R 228 (355)
T ss_pred cccccCccccchHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCe----EEEEEECCcc-----c
Confidence 99888653321111 1221 56789999999999999999999999998876654 5888885432 1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECC-CCCCCChhHHHHHHhccCCCceEEEcC
Q psy2719 364 KALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTP-LRDGMNLVAKEYVACQIREPGVLILSP 442 (808)
Q Consensus 364 ~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S-~~EG~gLv~~Eama~~~~~~g~vVlS~ 442 (808)
+.+.+.+.+.+.+.+. .+-+.+.|. .+++..+|+.||++++|| ..||||++++|||||+ .|+|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~-------~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G----~PvI~~~ 295 (355)
T cd03819 229 RFYYAELLELIKRLGL-------QDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMG----RPVIASD 295 (355)
T ss_pred chHHHHHHHHHHHcCC-------cceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcC----CCEEEcC
Confidence 2344444555544332 122345566 678999999999999999 7899999999999996 5689999
Q ss_pred CCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcC
Q psy2719 443 FAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQL 493 (808)
Q Consensus 443 ~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~ 493 (808)
.+|..+.+. +|++++|.|+++++++|..++..+++++.+..+++++.+.++
T Consensus 296 ~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 296 HGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred CCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 888777774 499999999999999998888777888887777777777543
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.3e-18 Score=193.52 Aligned_cols=197 Identities=14% Similarity=0.183 Sum_probs=152.4
Q ss_pred cCeEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCC
Q psy2719 277 AGRTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS 356 (808)
Q Consensus 277 ~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~ 356 (808)
+....++.++|+|+|...+.+... ..+...|+++||+.+.||++.+++|+.++.+++|+. ++.++.+|.+
T Consensus 203 ~~~~~ki~vi~~gv~~~~~~~~~~-------~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~--~l~~~iiG~g- 272 (407)
T cd04946 203 PAYKEKIKVSYLGVSDPGIISKPS-------KDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSI--KIKWTHIGGG- 272 (407)
T ss_pred CCccccEEEEECCcccccccCCCC-------CCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCc--eEEEEEEeCc-
Confidence 445567889999999876653210 135678999999999999999999999999998876 4667767642
Q ss_pred CCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHh--cCeEEECCCCCCCChhHHHHHHhccCC
Q psy2719 357 RTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRD--SAIALVTPLRDGMNLVAKEYVACQIRE 434 (808)
Q Consensus 357 ~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~--Adv~v~~S~~EG~gLv~~Eama~~~~~ 434 (808)
+. .+++++++.+.+. .+.+.+.|.++.+++.++|+. ||+|+.||..||||++++||||||
T Consensus 273 ----~~----~~~l~~~~~~~~~-------~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G--- 334 (407)
T cd04946 273 ----PL----EDTLKELAESKPE-------NISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFG--- 334 (407)
T ss_pred ----hH----HHHHHHHHHhcCC-------CceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcC---
Confidence 22 2334444432211 133556899999999999986 789999999999999999999996
Q ss_pred CceEEEcCCCCCccccC---ceEEECCC-CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHH
Q psy2719 435 PGVLILSPFAGAGGMMH---EALLVNPY-EIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFL 503 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l~---~~llvnP~-d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l 503 (808)
.|+|+|+.+|..+.+. +|++++|. |++++|++|.++++ +++++.++.+++++.+ +.+++..+.++|+
T Consensus 335 -~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~-~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 335 -IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFID-NEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred -CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 5699999999888884 47888874 89999999999998 4566666667777777 4678888888775
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.5e-18 Score=193.69 Aligned_cols=207 Identities=15% Similarity=0.170 Sum_probs=155.7
Q ss_pred cCeEEEEEEeecCcCccccchhhcCc-hhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEE
Q psy2719 277 AGRTVHVKALPIGIPFERFVQLAENA-PENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQ 351 (808)
Q Consensus 277 ~gr~~~v~v~p~GID~~~f~~~~~~~-~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ 351 (808)
+....++.++|||||.+.|.+..... ...+++ .++++|+++||+.+.||++.+++|++++ +++|+ +.|++
T Consensus 190 ~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~kg~~~li~a~~~l-~~~~~----~~l~i 264 (412)
T PRK10307 190 GVAAEKVIFFPNWSEVARFQPVADADVDALRAQLGLPDGKKIVLYSGNIGEKQGLELVIDAARRL-RDRPD----LIFVI 264 (412)
T ss_pred CCCcccEEEECCCcCHhhcCCCCccchHHHHHHcCCCCCCEEEEEcCccccccCHHHHHHHHHHh-ccCCC----eEEEE
Confidence 34556899999999999887643211 122222 4568999999999999999999999876 44554 45887
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCC----hhHHHH
Q psy2719 352 ISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMN----LVAKEY 427 (808)
Q Consensus 352 ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~g----Lv~~Ea 427 (808)
+|.+ +. ++++++++.+.+. ..| .|.|.++.+++..+|+.||++++||..|+++ ...+||
T Consensus 265 vG~g-----~~----~~~l~~~~~~~~l-------~~v-~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~ea 327 (412)
T PRK10307 265 CGQG-----GG----KARLEKMAQCRGL-------PNV-HFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNM 327 (412)
T ss_pred ECCC-----hh----HHHHHHHHHHcCC-------Cce-EEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHH
Confidence 7732 22 3445555554332 244 4568999999999999999999999999954 457999
Q ss_pred HHhccCCCceEEEcCCCCC--cccc-CceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHh-cCCHHHHHHHHH
Q psy2719 428 VACQIREPGVLILSPFAGA--GGMM-HEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQ-QLDVNHWMNSFL 503 (808)
Q Consensus 428 ma~~~~~~g~vVlS~~~G~--~~~l-~~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l 503 (808)
|||+ .|+|+|..+|. .+.+ .+|++++|.|++++|++|.+++++ ++++..+.+++++++. .+|++.-+++|+
T Consensus 328 ma~G----~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~ 402 (412)
T PRK10307 328 LASG----RNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQ-ALLRPKLGTVAREYAERTLDKENVLRQFI 402 (412)
T ss_pred HHcC----CCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 9996 56888887764 2444 469999999999999999999875 4566666677787775 689999999999
Q ss_pred HHHHccc
Q psy2719 504 SSMGALD 510 (808)
Q Consensus 504 ~~l~~~~ 510 (808)
+.++++.
T Consensus 403 ~~~~~~~ 409 (412)
T PRK10307 403 ADIRGLV 409 (412)
T ss_pred HHHHHHh
Confidence 9888753
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=201.00 Aligned_cols=194 Identities=15% Similarity=0.152 Sum_probs=147.0
Q ss_pred CeEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 278 GRTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 278 gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
+...+|.++|+|++...+.+.. ......|++|||+.+.||++.+|+|+.++.++.|++ .|+++|.+
T Consensus 294 ~~~~ki~viP~g~~~~~~~~~~--------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~----~l~i~G~G-- 359 (500)
T TIGR02918 294 NIEPRIYTIPVGSLDELQYPEQ--------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPEL----TFDIYGEG-- 359 (500)
T ss_pred CCCCcEEEEcCCCcccccCccc--------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCe----EEEEEECc--
Confidence 3456788999998765443211 023467999999999999999999999999999875 47777742
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
++ ++++++++.+.+.. ..+.+.|.. ++..+|+.||++|+||.+||||++++|||||| .|
T Consensus 360 ---~~----~~~l~~~i~~~~l~-------~~V~f~G~~---~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G----~P 418 (500)
T TIGR02918 360 ---GE----KQKLQKIINENQAQ-------DYIHLKGHR---NLSEVYKDYELYLSASTSEGFGLTLMEAVGSG----LG 418 (500)
T ss_pred ---hh----HHHHHHHHHHcCCC-------CeEEEcCCC---CHHHHHHhCCEEEEcCccccccHHHHHHHHhC----CC
Confidence 22 34556666554321 334566764 57788999999999999999999999999995 56
Q ss_pred EEEcCCC-CCccccC---ceEEECC----CC----HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHH
Q psy2719 438 LILSPFA-GAGGMMH---EALLVNP----YE----IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSS 505 (808)
Q Consensus 438 vVlS~~~-G~~~~l~---~~llvnP----~d----~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 505 (808)
+|+|+.. |..+.+. +|++|++ .| ++++|++|.++|+ ++++.+..+++++.++.+++..-++++.+.
T Consensus 419 VI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~l 496 (500)
T TIGR02918 419 MIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKL 496 (500)
T ss_pred EEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 8888876 6666663 5999984 33 8999999999994 445666667788888999998888888776
Q ss_pred HHc
Q psy2719 506 MGA 508 (808)
Q Consensus 506 l~~ 508 (808)
+++
T Consensus 497 l~~ 499 (500)
T TIGR02918 497 VRE 499 (500)
T ss_pred Hhh
Confidence 654
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=197.91 Aligned_cols=196 Identities=16% Similarity=0.192 Sum_probs=147.1
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCcc-CcEEEEEEEcCCCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYV-EKVTFLQISVPSRTD 359 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~-~~v~lv~ig~~~~~~ 359 (808)
.++.++|+|+|++.|.+.... ...++++|+++||+.+.||+..+|+||.++.++.|+.. .++.|+++|.+...
T Consensus 212 ~~~~vi~~gvd~~~~~~~~~~-----~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~- 285 (419)
T cd03806 212 TKPSIVYPPCDVEELLKLPLD-----EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE- 285 (419)
T ss_pred CCcEEEcCCCCHHHhcccccc-----cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc-
Confidence 368899999999888653210 01356789999999999999999999999998887521 24678888853211
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEE
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLI 439 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vV 439 (808)
+..++.+++++++.+.+.. +.+.|.|.++.+++..+|+.||++++||..||||++++|||||+ .|+|
T Consensus 286 --~~~~~~~~L~~~~~~l~l~-------~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G----~pvI 352 (419)
T cd03806 286 --DDEKRVEDLKLLAKELGLE-------DKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG----LIPL 352 (419)
T ss_pred --ccHHHHHHHHHHHHHhCCC-------CeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC----CcEE
Confidence 1123556667777665432 33556789999999999999999999999999999999999995 5688
Q ss_pred EcCCCCCcc-ccC------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHH
Q psy2719 440 LSPFAGAGG-MMH------EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNH 497 (808)
Q Consensus 440 lS~~~G~~~-~l~------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~ 497 (808)
+|+.+|..+ .+. +|++++ |++++|++|.++++++++++..+.++.++..++++++.
T Consensus 353 a~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 353 AHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred EEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 888777654 443 488874 99999999999999887666555444455555566544
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-18 Score=190.40 Aligned_cols=188 Identities=12% Similarity=0.104 Sum_probs=138.9
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
.++.++|+|||++.|.+.... ..+..++++++|+.+.||++.+|+|++++.++.|++ .|+++|...
T Consensus 118 ~~i~vIpNGVd~~~f~~~~~~------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~----~llivG~~~---- 183 (331)
T PHA01630 118 QPIYVIPHNLNPRMFEYKPKE------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDF----YFLIKSSNM---- 183 (331)
T ss_pred CCEEEECCCCCHHHcCCCccc------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCE----EEEEEeCcc----
Confidence 367789999999988653211 123456667789999999999999999998877754 477777211
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLIL 440 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVl 440 (808)
. +. + +. .+ . . +.+.++.+++..+|+.||+||+||..||||++++|||||+ .|+|+
T Consensus 184 -~--~~--~---l~-~~------~---~---~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G----~PVIa 238 (331)
T PHA01630 184 -L--DP--R---LF-GL------N---G---VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG----LDVVV 238 (331)
T ss_pred -c--ch--h---hc-cc------c---c---eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC----CCEEE
Confidence 0 11 1 10 01 0 1 1356889999999999999999999999999999999996 56999
Q ss_pred cCCCCCccccC---ceEEE--------------------CCCCHHHHHHHHHHHhCCC-HHHHHHHHH-HHhHHHhcCCH
Q psy2719 441 SPFAGAGGMMH---EALLV--------------------NPYEIDAAANVLHRALCMP-RDERELRMS-QLRHREQQLDV 495 (808)
Q Consensus 441 S~~~G~~~~l~---~~llv--------------------nP~d~~~lA~ai~~~L~~~-~~e~~~r~~-~~~~~v~~~~~ 495 (808)
|+.+|..+.+. +|++| +| |.++++++|.++|..+ ++++++++. ..+...+++|+
T Consensus 239 s~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~ 317 (331)
T PHA01630 239 TEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSY 317 (331)
T ss_pred eCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCH
Confidence 99888777763 35555 44 7888999999999864 234444444 45566789999
Q ss_pred HHHHHHHHHHHHc
Q psy2719 496 NHWMNSFLSSMGA 508 (808)
Q Consensus 496 ~~W~~~~l~~l~~ 508 (808)
...++++++.+++
T Consensus 318 ~~ia~k~~~l~~~ 330 (331)
T PHA01630 318 NAIAKMWEKILEK 330 (331)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988754
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.1e-18 Score=184.90 Aligned_cols=202 Identities=21% Similarity=0.320 Sum_probs=150.4
Q ss_pred CeEEEEEEeecCcCccccchhhcCch-hhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcC
Q psy2719 278 GRTVHVKALPIGIPFERFVQLAENAP-ENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVP 355 (808)
Q Consensus 278 gr~~~v~v~p~GID~~~f~~~~~~~~-~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~ 355 (808)
....++.++|+|+|.+.|.+...... ..... .++++|+++||+.+.||++.+++|+.++.+++|++ .|+++|..
T Consensus 168 ~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~l~i~G~~ 243 (375)
T cd03821 168 GLKAPIAVIPNGVDIPPFAALPSRGRRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDW----HLVIAGPD 243 (375)
T ss_pred CCcccEEEcCCCcChhccCcchhhhhhhhccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCe----EEEEECCC
Confidence 34567899999999988865422110 00011 56789999999999999999999999999887765 47777743
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCC
Q psy2719 356 SRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREP 435 (808)
Q Consensus 356 ~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~ 435 (808)
.. .+ ...++.++.+.+. .+.+.+.|.++.+++..+|+.||++++||..||||++++||||||
T Consensus 244 ~~----~~---~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G---- 305 (375)
T cd03821 244 EG----GY---RAELKQIAAALGL-------EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACG---- 305 (375)
T ss_pred Cc----ch---HHHHHHHHHhcCc-------cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcC----
Confidence 21 11 2222333333321 234567899999999999999999999999999999999999996
Q ss_pred ceEEEcCCCCCccccC--ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH-HhcCCHHHHHHHHH
Q psy2719 436 GVLILSPFAGAGGMMH--EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHR-EQQLDVNHWMNSFL 503 (808)
Q Consensus 436 g~vVlS~~~G~~~~l~--~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~-v~~~~~~~W~~~~l 503 (808)
.|+|+|+.+|..+.+. .|+++++ |.++++++|.++++++ +++....+++++. .+.++++.-+++++
T Consensus 306 ~PvI~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 306 TPVVTTDKVPWQELIEYGCGWVVDD-DVDALAAALRRALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred CCEEEcCCCCHHHHhhcCceEEeCC-ChHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 5699999888887774 3666654 6699999999999876 5666666666766 57778888777765
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.2e-18 Score=183.05 Aligned_cols=199 Identities=17% Similarity=0.129 Sum_probs=134.9
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++||+|+||||++. ...++++++++|++|++. |+
T Consensus 4 ~kli~~DlDGTLl~~-----~~~~~~~~~~ai~~l~~~----------------------------------------Gi 38 (273)
T PRK00192 4 KLLVFTDLDGTLLDH-----HTYSYEPAKPALKALKEK----------------------------------------GI 38 (273)
T ss_pred ceEEEEcCcccCcCC-----CCcCcHHHHHHHHHHHHC----------------------------------------CC
Confidence 469999999999983 346788899999999987 99
Q ss_pred eEEEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCC---------------ceeecCCChhHHHHHHHHHHHHHhhc
Q psy2719 623 NIGIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDG---------------TKFVHPVPKEYAEKLRQLIKALQDEV 685 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~---------------~~~~~~~~~~~~~~v~~i~~~~~~~~ 685 (808)
.++|+|||+...+...+... ..++|++||+.|+.+++ ..+..+++. +.+.++++.+.+..
T Consensus 39 ~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~ 115 (273)
T PRK00192 39 PVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGPPY---EELREILDEISDEL 115 (273)
T ss_pred EEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCCCH---HHHHHHHHHHHHHh
Confidence 99999999998877766421 23689999999986432 123345554 35666665544320
Q ss_pred cCCCcEEEe--------------------c--CcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCC
Q psy2719 686 CHDGAWIEN--------------------K--GVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVK 743 (808)
Q Consensus 686 ~~~g~~ie~--------------------k--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~ 743 (808)
...-..... + .....+.+. + ..+..+.+.+.+...++.+..+..++||.|+ +
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~-~ 189 (273)
T PRK00192 116 GYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWN--G---SEAAKERFEEALKRLGLKVTRGGRFLHLLGG-G 189 (273)
T ss_pred CCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeec--C---chHHHHHHHHHHHHcCCEEEECCeEEEEeCC-C
Confidence 000000000 0 000000000 0 0112333444444456666666789999998 9
Q ss_pred CCHHHHHHHHHHHhcCCCC-CcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccc----ccc-cccc
Q psy2719 744 WDQGRASIHILRTMYGVDW-SERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVK----SSW-KQGS 803 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~-~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk----~~A-~~~~ 803 (808)
+||+|+++++++ +|++. + ++++|| |++||+.++ ++++|+| .+++| ..| ++++
T Consensus 190 -~Kg~al~~l~~~-~~i~~~~---~v~~~GDs~NDi~m~~~ag---~~vam~NA~~~~k~~~~~~a~~~v~ 252 (273)
T PRK00192 190 -DKGKAVRWLKEL-YRRQDGV---ETIALGDSPNDLPMLEAAD---IAVVVPGPDGPNPPLLPGIADGEFI 252 (273)
T ss_pred -CHHHHHHHHHHH-HhccCCc---eEEEEcCChhhHHHHHhCC---eeEEeCCCCCCCcccCccccCCceE
Confidence 999999999996 89987 6 899999 999999994 5599998 58899 776 7887
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.1e-19 Score=183.61 Aligned_cols=198 Identities=18% Similarity=0.216 Sum_probs=130.0
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
||++|+||||++ ++..+++.+ ++++ +.++ |+.+
T Consensus 1 li~~DlDgTLl~-----~~~~~~~~~-~~~~-~~~~----------------------------------------gi~~ 33 (236)
T TIGR02471 1 LIITDLDNTLLG-----DDEGLASFV-ELLR-GSGD----------------------------------------AVGF 33 (236)
T ss_pred CeEEeccccccC-----CHHHHHHHH-HHHH-hcCC----------------------------------------CceE
Confidence 589999999998 234566655 5665 4444 8999
Q ss_pred EEEeCCChhhHHHhcCcc----ceEEEcccceeEecCCCceeecCCChhHHHHH------HHHHHHHHhhccCCCcEEEe
Q psy2719 625 GIISGRTLENLMKMVNIE----KVTYAGSHGLEILHPDGTKFVHPVPKEYAEKL------RQLIKALQDEVCHDGAWIEN 694 (808)
Q Consensus 625 ~I~SGR~~~~l~~~~~~~----~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v------~~i~~~~~~~~~~~g~~ie~ 694 (808)
+++|||++..+.+.+... ..++|++||+.|+.+.... .+..|...+ .++.+.+.+ .+|..++.
T Consensus 34 viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 106 (236)
T TIGR02471 34 GIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ----PDRFWQKHIDHDWRRQAVVEALAD---IPGLTLQD 106 (236)
T ss_pred EEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC----CChhHHHHHhcCCCHHHHHHHHhc---CCCcEeCC
Confidence 999999999999887421 2358999999987543210 011121111 122222222 45555554
Q ss_pred cCc--EEEEEcCcCChhhHHHHHHHHHHHHHhc--CeeE-EccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEE
Q psy2719 695 KGV--LLTFHYRETPIERREYIIDRASQIFLEA--GFEP-HNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRII 769 (808)
Q Consensus 695 k~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v-~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~vi 769 (808)
+.. ...++++..++.. ..+.++.+.+... .+.+ .++..++|+.|+ ++|||.|++.|+++ +|++.+ +++
T Consensus 107 ~~~~~~~~i~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~-~~~K~~al~~l~~~-~g~~~~---~~i 179 (236)
T TIGR02471 107 DQEQGPFKISYLLDPEGE--PILPQIRQRLRQQSQAAKVILSCGWFLDVLPL-RASKGLALRYLSYR-WGLPLE---QIL 179 (236)
T ss_pred hhcCCCeeEEEEECcccc--hHHHHHHHHHHhccCCEEEEEECCceEEEeeC-CCChHHHHHHHHHH-hCCCHH---HEE
Confidence 431 3444554433211 1123333444333 2333 456678999998 99999999999997 898864 799
Q ss_pred EEe----CHHHHHhccCCccEEEeCC-CCccccccc----cccCcC
Q psy2719 770 YAG----NEDAMLALQGIACTFRVDS-SPTVKSSWK----QGSNHT 806 (808)
Q Consensus 770 a~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~----~~~~~~ 806 (808)
+|| |++||+.+ |.+|+|+| .+++|+.|+ |++.++
T Consensus 180 ~~GD~~nD~~ml~~~---~~~iav~na~~~~k~~a~~~~~~v~~~~ 222 (236)
T TIGR02471 180 VAGDSGNDEEMLRGL---TLGVVVGNHDPELEGLRHQQRIYFANNP 222 (236)
T ss_pred EEcCCccHHHHHcCC---CcEEEEcCCcHHHHHhhcCCcEEEcCCC
Confidence 999 99999988 45699997 589999999 888754
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-18 Score=189.07 Aligned_cols=201 Identities=21% Similarity=0.229 Sum_probs=153.0
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
...++.++|+|+|...+............. .+++.|+++||+.+.||++.+++|+..+.+++|++ .|+++|....
T Consensus 162 ~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~----~l~i~G~~~~ 237 (365)
T cd03809 162 PPDKIVVIPLGVDPRFRPPPAEAEVLRALYLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDP----KLVIVGKRGW 237 (365)
T ss_pred CHHHEEeeccccCccccCCCchHHHHHHhcCCCCCeEEEeCCCccccCHHHHHHHHHHHHHhcCCC----CEEEecCCcc
Confidence 345788999999988876532210000111 56789999999999999999999999999887754 4777774332
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
. +......+ .+.+ ..+.+.+.|.++.+++..+|+.||++++||..||||++++|||||+ .|
T Consensus 238 ~----~~~~~~~~----~~~~-------~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G----~p 298 (365)
T cd03809 238 L----NEELLARL----RELG-------LGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACG----TP 298 (365)
T ss_pred c----cHHHHHHH----HHcC-------CCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCC----Cc
Confidence 1 11122221 1221 1245667899999999999999999999999999999999999995 56
Q ss_pred EEEcCCCCCccccC-ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHH
Q psy2719 438 LILSPFAGAGGMMH-EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFL 503 (808)
Q Consensus 438 vVlS~~~G~~~~l~-~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l 503 (808)
+|+|+.+|..+.+. +|++++|.|+++++++|.++++. ++.+....+++++.+..++|+.++++++
T Consensus 299 vI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 299 VIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred EEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 88888877777664 69999999999999999999874 5566666667778889999999998875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-17 Score=182.21 Aligned_cols=205 Identities=18% Similarity=0.205 Sum_probs=152.6
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
.++.++|+|+|...+.+.... .......++++|+++||+.+.||++.+++|++.+.+++|++ .|+++|..... .
T Consensus 156 ~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~----~l~i~G~~~~~-~ 229 (366)
T cd03822 156 EKIAVIPHGVPDPPAEPPESL-KALGGLDGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDV----RLLVAGETHPD-L 229 (366)
T ss_pred CcEEEeCCCCcCcccCCchhh-HhhcCCCCCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCe----EEEEeccCccc-h
Confidence 578889999998777543221 11011156789999999999999999999999998887765 47777743211 1
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCC--CCChhHHHHHHhccCCCceE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRD--GMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~E--G~gLv~~Eama~~~~~~g~v 438 (808)
. .......+++.+.+.. ..|.++.+.++.+++..+|+.||++++||..| ||+++++|||||| .|+
T Consensus 230 ~---~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G----~Pv 296 (366)
T cd03822 230 E---RYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFG----KPV 296 (366)
T ss_pred h---hhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcC----CCE
Confidence 1 1111101223333221 14555555599999999999999999999999 9999999999996 468
Q ss_pred EEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 439 ILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 439 VlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
|+|+.+| .+++. +|+++++.|+++++++|..+++.+ +.+.+..+++++++++++++.+++++.+.+
T Consensus 297 I~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 297 ISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred EecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 8888877 66662 599999999999999999999854 455566667788888899999999888754
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.8e-18 Score=191.54 Aligned_cols=201 Identities=17% Similarity=0.194 Sum_probs=150.4
Q ss_pred EEEeecCcCccccchhhcCc-hhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhC---CCccCcEEEEEEEcCCC
Q psy2719 283 VKALPIGIPFERFVQLAENA-PENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKH---PEYVEKVTFLQISVPSR 357 (808)
Q Consensus 283 v~v~p~GID~~~f~~~~~~~-~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~---p~~~~~v~lv~ig~~~~ 357 (808)
+.++|+|+|.+.|.+..... ...... .+.++|+++||+.+.||++.+++|++++.++. |+ +.|+++|.+..
T Consensus 181 ~~vi~n~vd~~~~~~~~~~~~~~~~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~----~~l~i~G~~~~ 256 (392)
T cd03805 181 REVVYPCVDTDSFESTSEDPDPGLLIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKN----VRLVIAGGYDP 256 (392)
T ss_pred cceeCCCcCHHHcCcccccccccccccCCCceEEEEEeeecccCChHHHHHHHHHHHhhcccccC----eEEEEEcCCCC
Confidence 35889999999887643211 010111 56789999999999999999999999998876 55 45888885432
Q ss_pred CChHHHHHHHHHHHHHHHH-HhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCc
Q psy2719 358 TDVLEYKALKDEMDQLVGR-INGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPG 436 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~-in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g 436 (808)
. .++..++.+++++++.+ .+.. .-+.|.|.++.+++..+|+.||++++||..||||++++|||||+ .
T Consensus 257 ~-~~~~~~~~~~l~~~~~~~~~l~-------~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G----~ 324 (392)
T cd03805 257 R-VAENVEYLEELQRLAEELLLLE-------DQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAG----K 324 (392)
T ss_pred C-CchhHHHHHHHHHHHHHhcCCC-------ceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcC----C
Confidence 1 12222345566666655 3221 33456799999999999999999999999999999999999995 5
Q ss_pred eEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHH
Q psy2719 437 VLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNS 501 (808)
Q Consensus 437 ~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~ 501 (808)
|+|+|+.+|..+.+. +|++++| |++++|++|.++++.+ +++.++.+++++++ ..++++..+++
T Consensus 325 PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 325 PVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDP-DLADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred CEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 699999888877774 4888977 9999999999999864 45555666677766 56788777664
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.4e-18 Score=186.24 Aligned_cols=201 Identities=19% Similarity=0.248 Sum_probs=149.2
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEc
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~ 354 (808)
...++.++|+|+|...|.+........+++ .+.++|+++||+.+.||++.+++|+..+.+++|++ .|+++|.
T Consensus 157 ~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~l~i~G~ 232 (365)
T cd03807 157 PPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNA----RLLLVGD 232 (365)
T ss_pred ChhheeEeCCCcCHHhcCCcccchHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHHHhCCCe----EEEEecC
Confidence 346788899999998876543321222221 45678999999999999999999999998887765 4777775
Q ss_pred CCCCChHHHHHHHHHHHHHHH-HHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccC
Q psy2719 355 PSRTDVLEYKALKDEMDQLVG-RINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIR 433 (808)
Q Consensus 355 ~~~~~~~~~~~l~~~l~~lv~-~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~ 433 (808)
++. .... +.... ..+. .+.+.+.+. .+++..+|+.||++++||..||||++++|||+|+
T Consensus 233 ~~~-----~~~~----~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g-- 292 (365)
T cd03807 233 GPD-----RANL----ELLALKELGL-------EDKVILLGE--RSDVPALLNALDVFVLSSLSEGFPNVLLEAMACG-- 292 (365)
T ss_pred Ccc-----hhHH----HHHHHHhcCC-------CceEEEccc--cccHHHHHHhCCEEEeCCccccCCcHHHHHHhcC--
Confidence 331 1112 22221 2221 123444554 4679999999999999999999999999999996
Q ss_pred CCceEEEcCCCCCccccC-ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHh-cCCHHHHHHHHHHHH
Q psy2719 434 EPGVLILSPFAGAGGMMH-EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQ-QLDVNHWMNSFLSSM 506 (808)
Q Consensus 434 ~~g~vVlS~~~G~~~~l~-~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l~~l 506 (808)
.|+|+|+.+|..+.+. .|+++++.|+++++++|.++++++ +++.+....+++++. .+++..-++++.+.+
T Consensus 293 --~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 364 (365)
T cd03807 293 --LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARERIEENFSIEAMVEAYEELY 364 (365)
T ss_pred --CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 5689999888877776 499999999999999999999865 555566666677664 578888888887643
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.4e-18 Score=184.04 Aligned_cols=190 Identities=20% Similarity=0.280 Sum_probs=145.2
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCC
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRT 358 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~ 358 (808)
...++.++|+|+|...+.+. ...+++.++++||+.+.||++.+++|++++.+..|++ .|+++|.+.
T Consensus 154 ~~~~~~vi~~~~~~~~~~~~--------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~----~l~i~G~~~-- 219 (348)
T cd03820 154 FNKNVVVIPNPLPFPPEEPS--------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDW----KLRIVGDGP-- 219 (348)
T ss_pred CCCCeEEecCCcChhhcccc--------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCe----EEEEEeCCC--
Confidence 45678899999998776543 0135678999999999999999999999998877765 477777432
Q ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceE
Q psy2719 359 DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 359 ~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~v 438 (808)
+. ..+++++.+.+. .+.+.+.|. .+++..+|+.||++++||..||||++++|||+|+ .|+
T Consensus 220 ---~~----~~~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G----~Pv 279 (348)
T cd03820 220 ---ER----EALEALIKELGL-------EDRVILLGF--TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFG----LPV 279 (348)
T ss_pred ---CH----HHHHHHHHHcCC-------CCeEEEcCC--cchHHHHHHhCCEEEeCccccccCHHHHHHHHcC----CCE
Confidence 11 223334444432 234556666 6899999999999999999999999999999996 568
Q ss_pred EEcCCCCCcccc-C---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHH
Q psy2719 439 ILSPFAGAGGMM-H---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFL 503 (808)
Q Consensus 439 VlS~~~G~~~~l-~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l 503 (808)
|+|+..|..+.+ . .|+++++.|+++++++|.++++. ++.+....+++++.++.++++..+++|.
T Consensus 280 i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 280 ISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMED-EELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred EEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 888876655444 2 58999999999999999999985 4455555556677888899998888774
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.8e-18 Score=187.88 Aligned_cols=186 Identities=18% Similarity=0.240 Sum_probs=141.2
Q ss_pred EEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHH
Q psy2719 283 VKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLE 362 (808)
Q Consensus 283 v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~ 362 (808)
+.++|+|++.+.+.+... ....+..|+++||+.+.||++.+|+|+.++.+++|+++ |+++|.+. .
T Consensus 182 v~~ip~g~~~~~~~~~~~------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g~-----~ 246 (372)
T cd04949 182 IYTIPVGSIDPLKLPAQF------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYGD-----E 246 (372)
T ss_pred eEEEcccccChhhcccch------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeCc-----h
Confidence 778999999887764310 01345679999999999999999999999999998764 77777532 1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcC
Q psy2719 363 YKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSP 442 (808)
Q Consensus 363 ~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~ 442 (808)
. ..+..++.+.+. ...+.+.|. .+++..+|+.||++|+||..||||++++|||||+ .|+|+|+
T Consensus 247 ~----~~~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G----~PvI~~~ 309 (372)
T cd04949 247 E----EKLKELIEELGL-------EDYVFLKGY--TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHG----LPVISYD 309 (372)
T ss_pred H----HHHHHHHHHcCC-------cceEEEcCC--CCCHHHHHhhhhEEEecccccccChHHHHHHhCC----CCEEEec
Confidence 1 223333333322 133455663 4679999999999999999999999999999995 5688888
Q ss_pred CC-CCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHH
Q psy2719 443 FA-GAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNS 501 (808)
Q Consensus 443 ~~-G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~ 501 (808)
.. |..+.+. +|++++|.|++++|++|..+++.+ +.+.+...++++...++++...+++
T Consensus 310 ~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 310 VNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred CCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 76 6666663 599999999999999999999864 5566666667777778887776654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=185.95 Aligned_cols=254 Identities=12% Similarity=0.094 Sum_probs=160.0
Q ss_pred CCCEEEEeccchHHHHHHHHhhc---CCEEE-eccHHHHHHH-----HHHHHHHhCc-eeecCCeEEEEcCeEEEEEEee
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQVA---YDFVG-FHIEDYCLNF-----IDCCCRRLGS-RVDRNNMLVELAGRTVHVKALP 287 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~~---~dlig-f~~~~~~~~f-----l~~~~~~l~~-~~~~~~~~i~~~gr~~~v~v~p 287 (808)
..|+|++|+.....+...+++.. .-++. .|.......+ +..++.++.. +...+.+ ..++-...++.++|
T Consensus 84 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~d~~i~~S~~~~~~~-~~~~~~~~ki~vi~ 162 (359)
T PRK09922 84 QPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAECKKITCADYHLAISSGIKEQM-MARGISAQRISVIY 162 (359)
T ss_pred CCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhhhhhhhcCCEEEEcCHHHHHHH-HHcCCCHHHEEEEc
Confidence 47999999987776666665432 11222 1211000001 1222222211 1111111 12222345788999
Q ss_pred cCcCccccchhhcCchhhhhcCCCeEEEEEcCcc--ccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHH
Q psy2719 288 IGIPFERFVQLAENAPENLKDENLKVILGVDRLD--YTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKA 365 (808)
Q Consensus 288 ~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~--~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~ 365 (808)
||||.+.+...... ..+++.|+++||+. +.||+..+++|+.++. + ++.|+++|.+ ++
T Consensus 163 N~id~~~~~~~~~~------~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~----~~~l~ivG~g-----~~--- 221 (359)
T PRK09922 163 NPVEIKTIIIPPPE------RDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---G----EWQLHIIGDG-----SD--- 221 (359)
T ss_pred CCCCHHHccCCCcc------cCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---C----CeEEEEEeCC-----cc---
Confidence 99997665321110 13457899999996 4699999999998752 2 3568888743 22
Q ss_pred HHHHHHHHHHHHhccCCCCCCccEEEEcCCC--CHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcC-
Q psy2719 366 LKDEMDQLVGRINGRFSKPNWSPIRYIFGCI--GQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSP- 442 (808)
Q Consensus 366 l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v--~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~- 442 (808)
++++++++.+.+.. +-+.|.|.+ +.+++..+|+.||++|+||..||||++++|||||+ .|+|+|+
T Consensus 222 -~~~l~~~~~~~~l~-------~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G----~Pvv~s~~ 289 (359)
T PRK09922 222 -FEKCKAYSRELGIE-------QRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG----IPCISSDC 289 (359)
T ss_pred -HHHHHHHHHHcCCC-------CeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcC----CCEEEeCC
Confidence 23445555554421 234566765 45889999999999999999999999999999996 5689998
Q ss_pred CCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 443 FAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 443 ~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
.+|..+.+. +|++|+|.|++++|++|.++++.+.. | ......+.+.++..+.-.+++...+.+
T Consensus 290 ~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 290 MSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVK-Y--QHDAIPNSIERFYEVLYFKNLNNALFS 355 (359)
T ss_pred CCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCccc-C--CHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 777777774 49999999999999999999986631 1 112223334455555555555555443
|
|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-17 Score=183.50 Aligned_cols=193 Identities=22% Similarity=0.281 Sum_probs=146.7
Q ss_pred CeEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 278 GRTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 278 gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
....++.++|+|+|.+.|.+.... ...++..|+++||+.+.||++.+++|++.+.++.|+ +.|+++|...
T Consensus 151 ~~~~~~~vi~~~~d~~~~~~~~~~-----~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~----~~l~i~G~~~- 220 (355)
T cd03799 151 CDPDKIHVVHCGVDLERFPPRPPP-----PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGID----FRLDIVGDGP- 220 (355)
T ss_pred CCcccEEEEeCCcCHHHcCCcccc-----ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCC----eEEEEEECCc-
Confidence 456788999999998887653200 014567899999999999999999999998877665 4577777432
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCC------CCCChhHHHHHHhc
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLR------DGMNLVAKEYVACQ 431 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~------EG~gLv~~Eama~~ 431 (808)
. ..++.+.+.+.+. .+.+.+.|.++.+++..+|+.||++++||.. ||||++++|||||+
T Consensus 221 ----~----~~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G 285 (355)
T cd03799 221 ----L----RDELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMG 285 (355)
T ss_pred ----c----HHHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcC
Confidence 1 2233444444321 2446678999999999999999999999999 99999999999995
Q ss_pred cCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHH
Q psy2719 432 IREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMN 500 (808)
Q Consensus 432 ~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~ 500 (808)
.|+|+|+.+|..+.+. +|++++|.|+++++++|.++++++ +++....+++++.+ ..+++...++
T Consensus 286 ----~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 286 ----LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDP-ELRREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred ----CCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHhh
Confidence 5688888877776663 599999999999999999999864 44555555666666 4567666554
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-17 Score=186.05 Aligned_cols=187 Identities=11% Similarity=0.062 Sum_probs=132.7
Q ss_pred EeecCcCccccchhhcCchhhhhcCC--CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHH
Q psy2719 285 ALPIGIPFERFVQLAENAPENLKDEN--LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLE 362 (808)
Q Consensus 285 v~p~GID~~~f~~~~~~~~~~~~~~~--~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~ 362 (808)
+.+.|||++.|.+............+ .+++++||||.+.||+..+|+||+.+.++.|++ .|+++|. +|+
T Consensus 200 ~~v~GVd~~~f~~~~~~~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~----~l~ivGd-----Gp~ 270 (462)
T PLN02846 200 CNVHGVNPKFLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGL----EVDLYGS-----GED 270 (462)
T ss_pred ecCceechhhcCCCcccHhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCe----EEEEECC-----Ccc
Confidence 34589999988765332111111122 357999999999999999999999998888875 4777763 344
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcC
Q psy2719 363 YKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSP 442 (808)
Q Consensus 363 ~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~ 442 (808)
. ++|++++.+++. .+++|.|..+.+ .+|+.+|+||+||.+||||+|++|||||+ .|+|+++
T Consensus 271 ~----~~L~~~a~~l~l--------~~~vf~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G----~PVVa~~ 331 (462)
T PLN02846 271 S----DEVKAAAEKLEL--------DVRVYPGRDHAD---PLFHDYKVFLNPSTTDVVCTTTAEALAMG----KIVVCAN 331 (462)
T ss_pred H----HHHHHHHHhcCC--------cEEEECCCCCHH---HHHHhCCEEEECCCcccchHHHHHHHHcC----CcEEEec
Confidence 3 344555555432 234577766554 58999999999999999999999999995 4588887
Q ss_pred CCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 443 FAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 443 ~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
..| .+.+. +|+++ .|.++++++|.++|+.++++... +. ...+||+.=++++++.+.-
T Consensus 332 ~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~a---~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 332 HPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---AQ---RHELSWEAATERFLRVADL 391 (462)
T ss_pred CCC-cceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---HH---HHhCCHHHHHHHHHHHhcc
Confidence 765 56663 47776 48999999999999854433211 11 2378888888888876653
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-17 Score=173.53 Aligned_cols=184 Identities=13% Similarity=0.163 Sum_probs=120.9
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
+|++|+||||++. +..++++++++|++|.+. |+.|
T Consensus 1 ~i~~DlDGTLL~~-----~~~~~~~~~~~l~~l~~~----------------------------------------gi~~ 35 (221)
T TIGR02463 1 WVFSDLDGTLLDS-----HSYDWQPAAPWLTRLQEA----------------------------------------GIPV 35 (221)
T ss_pred CEEEeCCCCCcCC-----CCCCcHHHHHHHHHHHHC----------------------------------------CCeE
Confidence 5899999999983 233556699999999887 9999
Q ss_pred EEEeCCChhhHHHhcC---ccceEEEcccceeEecCCC-c-e-----eecCCChhHHHHHHHHHHHHHhhccCCCcEEEe
Q psy2719 625 GIISGRTLENLMKMVN---IEKVTYAGSHGLEILHPDG-T-K-----FVHPVPKEYAEKLRQLIKALQDEVCHDGAWIEN 694 (808)
Q Consensus 625 ~I~SGR~~~~l~~~~~---~~~~~li~~nG~~i~~~~~-~-~-----~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~ 694 (808)
+++|||+...+...+. ..+.++|++||+.|+.... . . ....++.+ .++++++.+.+.....-.....
T Consensus 36 ~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~ 112 (221)
T TIGR02463 36 ILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWREEPGYPRIILGISYG---IIRLVLETLSEELHFKFTPFDD 112 (221)
T ss_pred EEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccccCCCceEEecCCCHH---HHHHHHHHHHHHhCCCceehhh
Confidence 9999999998877764 3225799999999987532 2 1 22344433 4566665443321000000000
Q ss_pred ----------------------cCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHHHH
Q psy2719 695 ----------------------KGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIH 752 (808)
Q Consensus 695 ----------------------k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ 752 (808)
+.....+... .+ .+..+.+.+.+...++.+.++..++||.|+ +++||.|+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~-~~~Kg~al~~ 186 (221)
T TIGR02463 113 LSDAEIAELTGLSGSQAALAQDREASVPLLWR-DS----DSRMPRFTALLADLGLAIVQGNRFSHVLGA-SSSKGKAANW 186 (221)
T ss_pred CCHHHHHHHhCcCHHHHHHHHhccCCccEEec-Cc----hhHHHHHHHHHHHcCCeEEecCCeeEEecC-CCCHHHHHHH
Confidence 0001111110 01 112233444444456666556789999998 9999999999
Q ss_pred HHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEe
Q psy2719 753 ILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRV 789 (808)
Q Consensus 753 ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav 789 (808)
++++ +|++.+ ++++|| |++||+.++ .| |||
T Consensus 187 l~~~-lgi~~~---~vi~~GD~~NDi~ml~~ag-~~--va~ 220 (221)
T TIGR02463 187 LKAT-YNQPDV---KTLGLGDGPNDLPLLEVAD-YA--VVI 220 (221)
T ss_pred HHHH-hCCCCC---cEEEECCCHHHHHHHHhCC-ce--EEe
Confidence 9997 899875 799999 999999995 44 776
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-17 Score=187.93 Aligned_cols=209 Identities=14% Similarity=0.147 Sum_probs=130.5
Q ss_pred CCCceEEEEecccccccCCCCCCccCCCHHHHHHH-HHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhC
Q psy2719 540 GNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVL-ERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLAN 618 (808)
Q Consensus 540 ~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L-~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~ 618 (808)
++.+.+|++|+||||++.. +++.++.....+| +++.++
T Consensus 6 ~~~~~lI~sDLDGTLL~~~---~~~~~s~~~~~~l~~~~~~~-------------------------------------- 44 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHH---DPENLSLLRFNALWEAEYRH-------------------------------------- 44 (413)
T ss_pred CCCCEEEEEcCCCcCcCCC---CccchhHHHHHHHHHHhhcC--------------------------------------
Confidence 3567899999999999842 1235665555555 777666
Q ss_pred CCCCeEEEEeCCChhhHHHh---cCc-cceEEEcccceeEecCCCc----eeecCCChhHHHH-HHHHHHHHHhhccCCC
Q psy2719 619 MPDVNIGIISGRTLENLMKM---VNI-EKVTYAGSHGLEILHPDGT----KFVHPVPKEYAEK-LRQLIKALQDEVCHDG 689 (808)
Q Consensus 619 ~pg~~v~I~SGR~~~~l~~~---~~~-~~~~li~~nG~~i~~~~~~----~~~~~~~~~~~~~-v~~i~~~~~~~~~~~g 689 (808)
|+.++++|||++..+.++ ++. .+..+|+.||+.|+..+.. .|...++..|... +.+.+..+... ...
T Consensus 45 --gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l--~~q 120 (413)
T PLN02382 45 --DSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETSKFPEL--KLQ 120 (413)
T ss_pred --CeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHhcCCCc--ccC
Confidence 899999999996665554 443 2335788899999764321 1111122222211 11111111110 111
Q ss_pred cEEEecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcC--eeE-EccCeEEEEeCCCCCCHHHHHHHHHHHhc---CCCCC
Q psy2719 690 AWIENKGVLLTFHYRETPIERREYIIDRASQIFLEAG--FEP-HNALMAIEAKPPVKWDQGRASIHILRTMY---GVDWS 763 (808)
Q Consensus 690 ~~ie~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-~~g~~~vEv~p~~~v~KG~av~~ll~~~~---~i~~~ 763 (808)
...+.+...+.+.+... ....+...+.+.+...+ +.+ .++..++||.|+ ++|||.|++.|+++ + |++.+
T Consensus 121 ~~~~~~~~Ki~~~~~~~---~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~-g~sKg~Al~~L~~~-~~~~gi~~~ 195 (413)
T PLN02382 121 PETEQRPHKVSFYVDKK---KAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQ-GAGKGQALAYLLKK-LKAEGKAPV 195 (413)
T ss_pred CcccCCCeEEEEEechH---HhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeC-CCCHHHHHHHHHHH-hhhcCCChh
Confidence 22233444555544321 12233444555454433 443 577789999998 99999999999997 7 88865
Q ss_pred cceeEEEEe----CHHHHHhccCCccEEEeCC-CCcccccccccc
Q psy2719 764 ERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGS 803 (808)
Q Consensus 764 ~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~ 803 (808)
++++|| |++||+.++. ++|+|+| .+++|+.|.+++
T Consensus 196 ---~~iafGDs~NDleMl~~ag~--~gvam~NA~~elk~~a~~~~ 235 (413)
T PLN02382 196 ---NTLVCGDSGNDAELFSVPDV--YGVMVSNAQEELLQWYAENA 235 (413)
T ss_pred ---cEEEEeCCHHHHHHHhcCCC--CEEEEcCCcHHHHHHHHhhc
Confidence 799999 9999999842 4599998 588998765444
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.4e-17 Score=175.89 Aligned_cols=201 Identities=23% Similarity=0.293 Sum_probs=151.7
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~ 359 (808)
.++.++|+|+|...+.+........... .+.+.|+++||+.+.||+..+++|+..+.+++|++ .|+++|.+
T Consensus 168 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~----~l~i~G~~---- 239 (374)
T cd03801 168 EKITVIPNGVDTERFRPAPRAARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDV----RLVIVGDG---- 239 (374)
T ss_pred CcEEEecCcccccccCccchHHHhhcCCcCCCeEEEEecchhhhcCHHHHHHHHHHHhhhcCCe----EEEEEeCc----
Confidence 5889999999998875431000000011 45678999999999999999999999998887654 57777722
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEE
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLI 439 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vV 439 (808)
+. ...+.+++.+.+. .+.+.+.|.++.+++..+|+.||++++||..||+|++++|||+|+ .|+|
T Consensus 240 -~~----~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g----~pvI 303 (374)
T cd03801 240 -PL----REELEALAAELGL-------GDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAG----LPVV 303 (374)
T ss_pred -HH----HHHHHHHHHHhCC-------CcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcC----CcEE
Confidence 22 2333333333322 123456789999999999999999999999999999999999995 5689
Q ss_pred EcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHh-HHHhcCCHHHHHHHHHHHH
Q psy2719 440 LSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLR-HREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 440 lS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~-~~v~~~~~~~W~~~~l~~l 506 (808)
++..+|..+.+. .|+++++.|+++++++|.++++.+ +.+++....++ ...+.++++.+++++++.+
T Consensus 304 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 304 ASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDP-ELRRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred EeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 999888888775 599999999999999999999854 44444555555 4567789999999887754
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.9e-17 Score=181.06 Aligned_cols=183 Identities=21% Similarity=0.249 Sum_probs=137.1
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~ 359 (808)
.++.++|+|+|.+.|.+........... .+.++|+++||+.+.||++.+++|++++. ++.|+++|.+
T Consensus 160 ~~~~~i~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~--------~~~l~i~G~g---- 227 (357)
T cd03795 160 DKVRVIPLGLDPARYPRPDALEEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP--------DAPLVIVGEG---- 227 (357)
T ss_pred cceEEecCCCChhhcCCcchhhhHhhcCCCCCcEEEEecccccccCHHHHHHHHHhcc--------CcEEEEEeCC----
Confidence 6788999999998876532211111111 56789999999999999999999998764 3567777743
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC--CCCCChhHHHHHHhccCCCce
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL--RDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~--~EG~gLv~~Eama~~~~~~g~ 437 (808)
+. ..++.+++.+.+. .+-+.+.|.++++++..+|+.||++++||. .||||++++|||+|+ .|
T Consensus 228 -~~----~~~~~~~~~~~~~-------~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g----~P 291 (357)
T cd03795 228 -PL----EAELEALAAALGL-------LDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFG----KP 291 (357)
T ss_pred -hh----HHHHHHHHHhcCC-------cceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcC----CC
Confidence 22 2334444433321 133556799999999999999999999996 599999999999995 56
Q ss_pred EEEcCCCCCccccC----ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhc
Q psy2719 438 LILSPFAGAGGMMH----EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQ 492 (808)
Q Consensus 438 vVlS~~~G~~~~l~----~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~ 492 (808)
+|+|+.+|..+.+. .|++++|.|+++++++|.+++++ ++++.+...++++.+.+
T Consensus 292 vi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 292 VISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLED-PELRERLGEAARERAEE 349 (357)
T ss_pred EEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHH
Confidence 88888888777663 48999999999999999999985 45556666666766643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.9e-17 Score=170.68 Aligned_cols=195 Identities=17% Similarity=0.249 Sum_probs=124.4
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
.++++|+|+||||++ +++.+++++.++|++|++ +
T Consensus 6 ~~~i~~~D~DGTLl~-----~~~~i~~~~~~ai~~l~~-----------------------------------------~ 39 (245)
T PLN02423 6 PGVIALFDVDGTLTA-----PRKEATPEMLEFMKELRK-----------------------------------------V 39 (245)
T ss_pred cceEEEEeccCCCcC-----CCCcCCHHHHHHHHHHHh-----------------------------------------C
Confidence 356777999999998 345799999999999984 4
Q ss_pred CeEEEEeCCChhhHHHhcCcc---c-eEEEcccceeEecCCCceeec----CCChhHHHHHHHHHHHHHhh---c---cC
Q psy2719 622 VNIGIISGRTLENLMKMVNIE---K-VTYAGSHGLEILHPDGTKFVH----PVPKEYAEKLRQLIKALQDE---V---CH 687 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~~~---~-~~li~~nG~~i~~~~~~~~~~----~~~~~~~~~v~~i~~~~~~~---~---~~ 687 (808)
+.|+++|||+...+.+.++.. . .++|++||+.+...++..+.. .++.+ .++++++..... . ..
T Consensus 40 i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~~i~~~~l~~~l~~~---~~~~ii~~~~~~~~~~~i~~~ 116 (245)
T PLN02423 40 VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGKLIGTQSLKSFLGED---KLKEFINFTLHYIADLDIPIK 116 (245)
T ss_pred CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCEEEEEecccccCCHH---HHHHHHHHHHHHHHHcCCccc
Confidence 899999999999998877642 1 378999999998654444442 24434 455665554431 0 12
Q ss_pred CCcEEEecCcEEEEEc--CcCChhhH---------HHHHHHHHH-HHHhc-CeeE---EccCeEEEEeCCCCCCHHHHHH
Q psy2719 688 DGAWIENKGVLLTFHY--RETPIERR---------EYIIDRASQ-IFLEA-GFEP---HNALMAIEAKPPVKWDQGRASI 751 (808)
Q Consensus 688 ~g~~ie~k~~~~~~~~--~~~~~~~~---------~~~~~~~~~-~~~~~-~~~v---~~g~~~vEv~p~~~v~KG~av~ 751 (808)
.+.+++..+..+...+ ..+..... .+....+.+ +.+.+ ++.+ .+|..++||+|+ |+|||.||+
T Consensus 117 ~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~-gvnKg~al~ 195 (245)
T PLN02423 117 RGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQ-GWDKTYCLQ 195 (245)
T ss_pred cCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeC-CCCHHHHHH
Confidence 3455554333222221 12211100 011112222 22333 2332 356689999998 999999999
Q ss_pred HHHHHhcCCCCCcceeEEEEe--------CHHHHHhccCCccEEEeCCCCcccc
Q psy2719 752 HILRTMYGVDWSERVRIIYAG--------NEDAMLALQGIACTFRVDSSPTVKS 797 (808)
Q Consensus 752 ~ll~~~~~i~~~~~~~via~G--------D~~Mf~~~~~~~~~vav~~~~~vk~ 797 (808)
.|+ +.+ ++|||| |++||+.-+-. +++|.+.++.++
T Consensus 196 ~L~------~~~---e~~aFGD~~~~~~ND~eMl~~~~~~--~~~~~~~~~~~~ 238 (245)
T PLN02423 196 FLE------DFD---EIHFFGDKTYEGGNDHEIFESERTI--GHTVTSPDDTRE 238 (245)
T ss_pred Hhc------CcC---eEEEEeccCCCCCCcHHHHhCCCcc--eEEeCCHHHHHH
Confidence 987 222 899999 69999976534 488888665543
|
|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.9e-17 Score=177.16 Aligned_cols=193 Identities=20% Similarity=0.246 Sum_probs=149.9
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhc---CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKD---ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~---~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
.++.++|+|+|.+.|.+.... ...++. .++++|+++||+.+.||++.+++|+..+.++ |++ .|+++|.+.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~-~~~----~l~i~G~~~- 237 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRD-EALRARLGPPDRPVLLYVGRLAPEKNLEALLDADLPLRRR-PPV----RLVIVGDGP- 237 (364)
T ss_pred CceeecCCCccccccCccccc-HHHHHHhCCCCCeEEEEEeccccccCHHHHHHHHHHhhhc-CCc----eEEEEeCCc-
Confidence 467889999999888654322 111111 4567899999999999999999999998876 655 477777421
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
+...++ ..+ ..| .+.|.++.+++..+|+.||++++||..||||++++|||||+ .|
T Consensus 238 ----~~~~~~--------~~~--------~~v-~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g----~P 292 (364)
T cd03814 238 ----ARARLE--------ARY--------PNV-HFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASG----LP 292 (364)
T ss_pred ----hHHHHh--------ccC--------CcE-EEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcC----CC
Confidence 111121 111 134 45688999999999999999999999999999999999995 56
Q ss_pred EEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 438 LILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 438 vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
+|+|+.+|..+.+. .|++++|.|.++++++|.++++. ++++.+....+++.+..++++.+++++++.+
T Consensus 293 vI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 293 VVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLAD-PELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred EEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 99999888887774 49999999999999999999975 4556666667777788899999999888654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.7e-17 Score=184.63 Aligned_cols=201 Identities=11% Similarity=0.117 Sum_probs=141.7
Q ss_pred cCeEEEEEEeecCcCccccchhhcCc--hhhhh------------------cCCCeEEEEEcCccccCChHHHHHHHHHH
Q psy2719 277 AGRTVHVKALPIGIPFERFVQLAENA--PENLK------------------DENLKVILGVDRLDYTKGLVHRIKAFERL 336 (808)
Q Consensus 277 ~gr~~~v~v~p~GID~~~f~~~~~~~--~~~~~------------------~~~~~iil~V~Rl~~~KGi~~~l~A~~~l 336 (808)
+....++.++|+| +.+.|.+..... ....+ ..+..+++++||+.+.||++.+++|++.+
T Consensus 179 ~~~~~ki~vI~Ng-~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l 257 (415)
T cd03816 179 NNWKIRATVLYDR-PPEQFRPLPLEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAY 257 (415)
T ss_pred hccCCCeeecCCC-CHHHceeCcHHHHHHHHHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHH
Confidence 3456788999999 556676532211 01110 03346788999999999999999999998
Q ss_pred HHhCCCc--cCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEEC
Q psy2719 337 LEKHPEY--VEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVT 414 (808)
Q Consensus 337 l~~~p~~--~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~ 414 (808)
.+..++. ..++.|+++|.+. .++++++++.+.+ ...++++.|.++.++++.+|++||++|++
T Consensus 258 ~~~~~~~~~~~~i~l~ivG~G~---------~~~~l~~~~~~~~-------l~~~~~~~g~~~~~~~~~~l~~aDv~v~~ 321 (415)
T cd03816 258 EKSAATGPKLPKLLCIITGKGP---------LKEKYLERIKELK-------LKKVTIRTPWLSAEDYPKLLASADLGVSL 321 (415)
T ss_pred HHhhcccccCCCEEEEEEecCc---------cHHHHHHHHHHcC-------CCcEEEEcCcCCHHHHHHHHHhCCEEEEc
Confidence 7632110 1135688887432 2345555555443 23678888899999999999999999974
Q ss_pred ---CCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCC--HHHHHHHHHHH
Q psy2719 415 ---PLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMP--RDERELRMSQL 486 (808)
Q Consensus 415 ---S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~--~~e~~~r~~~~ 486 (808)
+..|||+++++|||||+ .|+|+|+..|..+.+. +|++|+ |++++|++|.++++++ +++++++.+++
T Consensus 322 ~~~~~~~~~p~~~~Eama~G----~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~ 395 (415)
T cd03816 322 HTSSSGLDLPMKVVDMFGCG----LPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGA 395 (415)
T ss_pred cccccccCCcHHHHHHHHcC----CCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 33588999999999996 5689999888888774 499994 9999999999999862 55665555555
Q ss_pred hHHHhcCCHHHHHHHHHH
Q psy2719 487 RHREQQLDVNHWMNSFLS 504 (808)
Q Consensus 487 ~~~v~~~~~~~W~~~~l~ 504 (808)
++..+ ..|.+.+..
T Consensus 396 ~~~~~----~~~~~~~~~ 409 (415)
T cd03816 396 QEESE----LRWDENWDR 409 (415)
T ss_pred HHhhh----cCHHHHHHH
Confidence 65543 455555544
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.4e-16 Score=169.78 Aligned_cols=193 Identities=20% Similarity=0.233 Sum_probs=143.7
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~ 359 (808)
..++.+.|+|+|.+.+.+.... ...+++.|+++||+.+.||++.+++|++.+.+++|++ .|+++|.+....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~----~l~i~G~~~~~~ 232 (359)
T cd03808 162 KKTVLIPGSGVDLDRFSPSPEP-----IPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNV----RLLLVGDGDEEN 232 (359)
T ss_pred CceEEecCCCCChhhcCccccc-----cCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCe----EEEEEcCCCcch
Confidence 3567788999998877653220 0145678999999999999999999999998877765 477777543211
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEE
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLI 439 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vV 439 (808)
+ .... ++...+. .+.+.+.|. .+++..+|+.||++++||..||||++++|||+|| .|+|
T Consensus 233 ---~--~~~~---~~~~~~~-------~~~v~~~g~--~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G----~Pvi 291 (359)
T cd03808 233 ---P--AAIL---EIEKLGL-------EGRVEFLGF--RDDVPELLAAADVFVLPSYREGLPRVLLEAMAMG----RPVI 291 (359)
T ss_pred ---h--hHHH---HHHhcCC-------cceEEEeec--cccHHHHHHhccEEEecCcccCcchHHHHHHHcC----CCEE
Confidence 1 1111 1222221 122344555 5789999999999999999999999999999996 5699
Q ss_pred EcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH-HhcCCHHHHHHHHH
Q psy2719 440 LSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHR-EQQLDVNHWMNSFL 503 (808)
Q Consensus 440 lS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~-v~~~~~~~W~~~~l 503 (808)
+|+.+|..+.+. .|+++++.|+++++++|.+++.. ++.+.+...+++++ ...+++..+++.++
T Consensus 292 ~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 292 ATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIED-PELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred EecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999988888774 49999999999999999998875 44555555566666 57788888888765
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.1e-16 Score=171.76 Aligned_cols=204 Identities=25% Similarity=0.344 Sum_probs=152.0
Q ss_pred eEEEEEEeecCcCccccchhhcCchh-hhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPE-NLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~-~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
...++.++|+|+|.+.|.+....... .....+++.|+++||+.+.||+..+++|++.+.+++|++ .|+++|.+.
T Consensus 169 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~----~l~i~g~~~- 243 (377)
T cd03798 169 DPEKVTVIPNGVDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDV----HLVIVGDGP- 243 (377)
T ss_pred CCCceEEcCCCcCcccCCCcchHHHHhccCCCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCe----EEEEEcCCc-
Confidence 45678899999999888654221100 011146788999999999999999999999998876654 477666422
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
.. ..+.+++...+ ..+.+.+.|.++++++..+|+.||++++||..||||++++|||+|+ .|
T Consensus 244 ----~~----~~~~~~~~~~~-------~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G----~p 304 (377)
T cd03798 244 ----LR----EALEALAAELG-------LEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACG----LP 304 (377)
T ss_pred ----ch----HHHHHHHHhcC-------CcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcC----CC
Confidence 22 22333333322 2244567799999999999999999999999999999999999996 56
Q ss_pred EEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 438 LILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 438 vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
+|+|+.+|..+.+. .|+++++.|+++++++|.++++++.. +..........+.++++.+++++.+.+++
T Consensus 305 vI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 305 VVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYRE 376 (377)
T ss_pred EEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 89998888777764 37999999999999999999987654 22222334455677889999888877754
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-18 Score=194.86 Aligned_cols=88 Identities=25% Similarity=0.548 Sum_probs=73.1
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+||||+||++++++.+|+||||+|....+. ++.. ......+++.||+|+++++++||+||||++|||+||
T Consensus 21 ~GGL~~aL~~~l~~~~g~WvGW~g~~~~~~-------~~~~---~~~~~~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfH 90 (474)
T PRK10117 21 AGGLAVGILGALKAAGGLWFGWSGETGNED-------QPLK---KVKKGNITWASFNLSEQDYDEYYNQFSNAVLWPAFH 90 (474)
T ss_pred CCCcHHHHHHHHHhcCceEEEecCCCCCCc-------ccch---hhhcCCceEEEecCCHHHHHHHHhhhhhcchhhhhC
Confidence 599999999999999999999999653210 1000 001124689999999999999999999999999999
Q ss_pred cCccccccCcccchhhhh
Q psy2719 81 SMPDRAVFNAETWKVSHL 98 (808)
Q Consensus 81 ~~~~~~~~~~~~w~~y~~ 98 (808)
|+++...|++++|+.|+.
T Consensus 91 y~~~~~~~~~~~w~~Y~~ 108 (474)
T PRK10117 91 YRLDLVQFQRPAWEGYLR 108 (474)
T ss_pred CCCCccCcCHHHHHHHHH
Confidence 999999999999999974
|
|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.2e-16 Score=171.41 Aligned_cols=198 Identities=21% Similarity=0.323 Sum_probs=145.4
Q ss_pred EEEEEEeecCcCccccchhhcCch-hhhh-cCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAP-ENLK-DENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~-~~~~-~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
..++.++|+|+|...|.+...... .... ..+++.|+++||+.+.||++.+++|++.+.++.|++ .|+++|.+.
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~----~l~i~G~~~- 243 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDV----KLVIVGDGP- 243 (374)
T ss_pred CCceEEcCCccchhccCccchhHHHHhcCCCCCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCe----EEEEEeCCc-
Confidence 345889999999988765432110 0001 145688999999999999999999999998876654 577777421
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
. .+.+++++.+.+. .+.+.+.|.++.+++..+|+.||++++||..||+|++++|||+|+ .|
T Consensus 244 ----~----~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g----~P 304 (374)
T cd03817 244 ----E----REELEELARELGL-------ADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAG----LP 304 (374)
T ss_pred ----h----HHHHHHHHHHcCC-------CCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcC----Cc
Confidence 1 2334444444332 133556799999999999999999999999999999999999995 56
Q ss_pred EEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 438 LILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 438 vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
+|+|..++..+.+. +|+++++.|. +++++|.++++++. .+++..++.++.+..++ |++.+.+.+
T Consensus 305 vI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~ 371 (374)
T cd03817 305 VVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRLSKNAEESAEKFS---FAKKVEKLY 371 (374)
T ss_pred EEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 88888887777774 4999999888 99999999998754 34555566677776654 444444433
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-15 Score=167.08 Aligned_cols=189 Identities=18% Similarity=0.224 Sum_probs=139.2
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~ 359 (808)
..++.++|+|+|...+.+... ....++.+|+++||+.+.||++.+++|+..+.+ ++ +.|+++|.....
T Consensus 165 ~~~~~vi~n~~~~~~~~~~~~-----~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~--~~----~~l~i~G~~~~~- 232 (359)
T cd03823 165 AEKISVIRNGIDLDRAKRPRR-----APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR--GD----IELVIVGNGLEL- 232 (359)
T ss_pred ccceEEecCCcChhhcccccc-----CCCCCceEEEEEecCccccCHHHHHHHHHHHHh--cC----cEEEEEcCchhh-
Confidence 468899999999988764321 011456789999999999999999999998876 44 457777743211
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC-CCCCChhHHHHHHhccCCCceE
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL-RDGMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~-~EG~gLv~~Eama~~~~~~g~v 438 (808)
....... .. .+.+.+.|.++.+++..+|+.||++++||. .||||++++|||||+ .|+
T Consensus 233 ----~~~~~~~-----~~---------~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G----~Pv 290 (359)
T cd03823 233 ----EEESYEL-----EG---------DPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG----VPV 290 (359)
T ss_pred ----hHHHHhh-----cC---------CCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC----CCE
Confidence 1111110 11 133556799999999999999999999997 799999999999996 569
Q ss_pred EEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 439 ILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 439 VlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
|+|+.+|..+.+. .|++++|.|+++++++|.++++. ++.++....++++.+.. ...++++++.+
T Consensus 291 i~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 357 (359)
T cd03823 291 IASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDD-PDLLERLRAGIEPPRSI---EDQAEEYLKLY 357 (359)
T ss_pred EECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhC-hHHHHHHHHhHHHhhhH---HHHHHHHHHHh
Confidence 9999888877774 49999999999999999999984 44555555555554432 55555555433
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-16 Score=181.22 Aligned_cols=188 Identities=17% Similarity=0.173 Sum_probs=127.9
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
++++||+|+||||++.. ..++++++++|++|+++ |
T Consensus 415 ~~KLIfsDLDGTLLd~d-----~~i~~~t~eAL~~L~ek----------------------------------------G 449 (694)
T PRK14502 415 FKKIVYTDLDGTLLNPL-----TYSYSTALDALRLLKDK----------------------------------------E 449 (694)
T ss_pred eeeEEEEECcCCCcCCC-----CccCHHHHHHHHHHHHc----------------------------------------C
Confidence 56899999999999832 35677899999999988 9
Q ss_pred CeEEEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCC-------------c--eeecCCChhHHHHHHHHHHHHHhh
Q psy2719 622 VNIGIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDG-------------T--KFVHPVPKEYAEKLRQLIKALQDE 684 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~-------------~--~~~~~~~~~~~~~v~~i~~~~~~~ 684 (808)
+.|+++|||+...+..++... ..++|++||+.|+.+++ . .+...++.+ .++++++...+.
T Consensus 450 I~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~~e---~i~~IL~~lke~ 526 (694)
T PRK14502 450 LPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMAYK---DIRHILKKALAE 526 (694)
T ss_pred CeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCCcccccccccccCCCeEEEEcCCCHH---HHHHHHHHHHHh
Confidence 999999999999887766421 24799999999997653 1 233455554 455666555442
Q ss_pred cc--------CCCcEEEecCc-------------------------EEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEc
Q psy2719 685 VC--------HDGAWIENKGV-------------------------LLTFHYRETPIERREYIIDRASQIFLEAGFEPHN 731 (808)
Q Consensus 685 ~~--------~~g~~ie~k~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 731 (808)
.. ....++..... ...+.+.. + ++.++++.+.+...++.+..
T Consensus 527 l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~~a~~a~~Re~seKIl~~g-d----~e~Leel~~~L~~~~l~v~~ 601 (694)
T PRK14502 527 ACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLKQAELAKQREYSETVHIEG-D----KRSTNIVLNHIQQSGLEYSF 601 (694)
T ss_pred hcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHHHHHHHhhccCceeEEEcC-C----HHHHHHHHHHHHHcCcEEEE
Confidence 10 01111211100 00000000 0 12334444555545777777
Q ss_pred cCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEE--e----CHHHHHhccCCccEEEeCC
Q psy2719 732 ALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYA--G----NEDAMLALQGIACTFRVDS 791 (808)
Q Consensus 732 g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~--G----D~~Mf~~~~~~~~~vav~~ 791 (808)
+..++||. + ++|||+|++.|++. ++++.+ ++++| | |++||++++ ++|+|++
T Consensus 602 g~rfleI~-~-gvdKG~AL~~L~e~-~gI~~~---eViafalGDs~NDisMLe~Ag---~gVAM~~ 658 (694)
T PRK14502 602 GGRFYEVT-G-GNDKGKAIKILNEL-FRLNFG---NIHTFGLGDSENDYSMLETVD---SPILVQR 658 (694)
T ss_pred CCEEEEeC-C-CCCHHHHHHHHHHH-hCCCcc---ceEEEEcCCcHhhHHHHHhCC---ceEEEcC
Confidence 99999998 6 89999999999996 898865 68888 7 999999995 4599986
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-16 Score=180.67 Aligned_cols=186 Identities=12% Similarity=0.078 Sum_probs=128.3
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCc--cccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRL--DYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRT 358 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl--~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~ 358 (808)
.++.+||||||++.+...... ...+...++++|++|+|. ++.||+..+++|+.++ .+ ++.|+++|.+...
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~-~~~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~ivG~g~~~ 283 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAEL-PPVRETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHTFGKFSPF 283 (405)
T ss_pred CCEEEeCCCcCcccccccccc-cccccCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEEEcCCCcc
Confidence 578899999997543221111 011111466789999994 4789999999999875 22 3568888753210
Q ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCC-CCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 359 DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGC-IGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 359 ~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~-v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
.. ..+.+ .|. .+.+++..+|+.||+||+||..||||++++|||||+ .|
T Consensus 284 -------~~-------------------~~v~~-~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G----~P 332 (405)
T PRK10125 284 -------TA-------------------GNVVN-HGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG----VP 332 (405)
T ss_pred -------cc-------------------cceEE-ecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC----CC
Confidence 00 02333 343 367899999999999999999999999999999996 56
Q ss_pred EEEcCCCCCccccC--ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHH
Q psy2719 438 LILSPFAGAGGMMH--EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 438 vVlS~~~G~~~~l~--~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 507 (808)
||+|+.+|+.+.+. +|++|+|.|++++|+++...+.. ........++++++ ..+++..-++++++..+
T Consensus 333 VVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~--~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 333 VIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQ--AVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred EEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHH--HhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999877774 59999999999999864322210 00001123344444 56899998888887654
|
|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.72 E-value=3e-16 Score=171.72 Aligned_cols=180 Identities=19% Similarity=0.223 Sum_probs=130.9
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
.++.++|+|+|++.|.+.. .++..|+++||+.+.||++.+++|+++ ++ +.|+++|.+..
T Consensus 150 ~~~~vi~ngvd~~~~~~~~---------~~~~~i~~~Gr~~~~Kg~~~li~~~~~-----~~----~~l~i~G~~~~--- 208 (335)
T cd03802 150 PWVATVHNGIDLDDYPFRG---------PKGDYLLFLGRISPEKGPHLAIRAARR-----AG----IPLKLAGPVSD--- 208 (335)
T ss_pred cccEEecCCcChhhCCCCC---------CCCCEEEEEEeeccccCHHHHHHHHHh-----cC----CeEEEEeCCCC---
Confidence 5788999999999886521 245689999999999999999999754 23 45777775431
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC-CCCCChhHHHHHHhccCCCceEE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL-RDGMNLVAKEYVACQIREPGVLI 439 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~-~EG~gLv~~Eama~~~~~~g~vV 439 (808)
.+ .+...+.+... ++ +-+.+.|.++.+++..+|+.||++++||. .||||++++|||||+ .|+|
T Consensus 209 ~~--~~~~~~~~~~~-~~---------~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G----~PvI 272 (335)
T cd03802 209 PD--YFYREIAPELL-DG---------PDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACG----TPVI 272 (335)
T ss_pred HH--HHHHHHHHhcc-cC---------CcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcC----CCEE
Confidence 11 12222222110 11 22456799999999999999999999997 599999999999996 5699
Q ss_pred EcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHH
Q psy2719 440 LSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSS 505 (808)
Q Consensus 440 lS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 505 (808)
+|+.+|..+.+. +|+++++ +++++++|.+++.++.+.. .+....+++++.-++++++.
T Consensus 273 ~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~~~------~~~~~~~~s~~~~~~~~~~~ 333 (335)
T cd03802 273 AFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRAAC------RRRAERRFSAARMVDDYLAL 333 (335)
T ss_pred EeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHHHH------HHHHHHhCCHHHHHHHHHHH
Confidence 999988888774 4899987 9999999999976532211 11123567887777776654
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.7e-16 Score=169.09 Aligned_cols=200 Identities=19% Similarity=0.242 Sum_probs=149.0
Q ss_pred cCeEEEEEEeecCcCccccchhhcCch-hhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEc
Q psy2719 277 AGRTVHVKALPIGIPFERFVQLAENAP-ENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISV 354 (808)
Q Consensus 277 ~gr~~~v~v~p~GID~~~f~~~~~~~~-~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~ 354 (808)
.....++.++|+|+|...+.+...... ..... .++.+|+++||+.+.||++.+++|+.++.+. |++ .|+++|.
T Consensus 184 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~-~~~----~l~i~G~ 258 (394)
T cd03794 184 GVPPEKISVIPNGVDLELFKPPPADESLRKELGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDR-PDI----RFLIVGD 258 (394)
T ss_pred CCCcCceEEcCCCCCHHHcCCccchhhhhhccCCCCcEEEEEecCcccccCHHHHHHHHHHHhhc-CCe----EEEEeCC
Confidence 344568899999999887765432110 00011 5678999999999999999999999998776 554 4777763
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCC-----ChhHHHHHH
Q psy2719 355 PSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGM-----NLVAKEYVA 429 (808)
Q Consensus 355 ~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~-----gLv~~Eama 429 (808)
+ +....+ .+++...+ ...+.+ .|.++.+++..+|+.||++++||..|++ +++++|||+
T Consensus 259 ~-----~~~~~~----~~~~~~~~-------~~~v~~-~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~ 321 (394)
T cd03794 259 G-----PEKEEL----KELAKALG-------LDNVTF-LGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMA 321 (394)
T ss_pred c-----ccHHHH----HHHHHHcC-------CCcEEE-eCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHH
Confidence 2 222222 23222211 124554 5699999999999999999999999876 667899999
Q ss_pred hccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHh-cCCHHHHHHHHH
Q psy2719 430 CQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQ-QLDVNHWMNSFL 503 (808)
Q Consensus 430 ~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l 503 (808)
|+ .|+|+|..+|..+.+. .|+++++.|+++++++|.++++. ++++.+..+++++++. .++++.++++++
T Consensus 322 ~G----~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 322 AG----KPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDD-PEERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred CC----CcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 95 5799999998888874 49999999999999999999964 5566666667777776 789999888763
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.9e-18 Score=190.53 Aligned_cols=92 Identities=17% Similarity=0.485 Sum_probs=72.8
Q ss_pred CCchhHhhHHHHhc-CCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCccccccc
Q psy2719 1 AGGLVTAVAPVVID-CKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLF 79 (808)
Q Consensus 1 ~GGL~~al~~~~~~-~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~ 79 (808)
+|||++||++++++ .+|+||||+|...++..+ ...+. .......++|.||+|+++++++||+||||++|||+|
T Consensus 25 ~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~---~~~~~---~~~~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlf 98 (487)
T TIGR02398 25 PNGIIPTLLSFFGDGRAGTWVAWAEHDENSGET---FDSHM---TVPAEYKLTAARIPLSKEQVDIFYHITSKEAFWPIL 98 (487)
T ss_pred CCchHHHHHHHhhcccceEEEeeCCCCcccccc---ccccc---ccccCCceeEEEEeCCHHHHHHHHhhhhhccccccc
Confidence 59999999999964 789999999964211000 00000 011234678999999999999999999999999999
Q ss_pred ccCccccccCcccchhhhh
Q psy2719 80 HSMPDRAVFNAETWKVSHL 98 (808)
Q Consensus 80 H~~~~~~~~~~~~w~~y~~ 98 (808)
||+++.+.|++.+|+.|+.
T Consensus 99 H~~~~~~~~~~~~w~~Y~~ 117 (487)
T TIGR02398 99 HTFPERFQFREDDWQVFLK 117 (487)
T ss_pred cCCccccCcCHHHHHHHHH
Confidence 9999999999999999974
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=168.08 Aligned_cols=193 Identities=16% Similarity=0.113 Sum_probs=140.0
Q ss_pred EEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHH
Q psy2719 284 KALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEY 363 (808)
Q Consensus 284 ~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~ 363 (808)
.++|+|+|...+.+.... .......+++.|+++||+.+.||+..+++|+.++.. ++.|+++|.+...
T Consensus 167 ~~i~ngv~~~~~~~~~~~-~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~-------~~~l~ivG~~~~~----- 233 (363)
T cd04955 167 TYIPYGADHVVSSEEDEI-LKKYGLEPGRYYLLVGRIVPENNIDDLIEAFSKSNS-------GKKLVIVGNADHN----- 233 (363)
T ss_pred eeeCCCcChhhcchhhhh-HHhcCCCCCcEEEEEecccccCCHHHHHHHHHhhcc-------CceEEEEcCCCCc-----
Confidence 789999998876541110 000001344578899999999999999999987632 3568888854321
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCC-CCCChhHHHHHHhccCCCceEEEcC
Q psy2719 364 KALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLR-DGMNLVAKEYVACQIREPGVLILSP 442 (808)
Q Consensus 364 ~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~-EG~gLv~~Eama~~~~~~g~vVlS~ 442 (808)
.++.+.+.+ ..+ . .+.+.+.|.++.+++..+|+.||++++||.. ||||++++|||||+ .|+|+|+
T Consensus 234 ~~~~~~~~~---~~~----~---~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G----~PvI~s~ 299 (363)
T cd04955 234 TPYGKLLKE---KAA----A---DPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYG----CPVLASD 299 (363)
T ss_pred chHHHHHHH---HhC----C---CCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcC----CCEEEec
Confidence 123333332 111 1 1234567999999999999999999999999 99999999999995 5699999
Q ss_pred CCCCccccC-ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHh-cCCHHHHHHHHHHHH
Q psy2719 443 FAGAGGMMH-EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQ-QLDVNHWMNSFLSSM 506 (808)
Q Consensus 443 ~~G~~~~l~-~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l~~l 506 (808)
.+|..+.+. +|.+++|.|. ++++|.++++.+ +.+.....+.++.+. .++++.-++++++.+
T Consensus 300 ~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 300 NPFNREVLGDKAIYFKVGDD--LASLLEELEADP-EEVSAMAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred CCccceeecCCeeEecCchH--HHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 888877775 5899988776 999999999865 445555555666665 478888888887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.70 E-value=6e-16 Score=174.66 Aligned_cols=192 Identities=17% Similarity=0.204 Sum_probs=138.8
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHH----HHHHHHHHhCCCccCcEEEEEEEcC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRI----KAFERLLEKHPEYVEKVTFLQISVP 355 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l----~A~~~ll~~~p~~~~~v~lv~ig~~ 355 (808)
..++.++|+|||++.|.+........ ..++++|+++||+++.||++.++ +++..+.+++|+++ |+++|.+
T Consensus 195 ~~~v~vipngvd~~~f~~~~~~~~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~g 268 (397)
T TIGR03087 195 AGRITAFPNGVDADFFSPDRDYPNPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGAK 268 (397)
T ss_pred CCCeEEeecccchhhcCCCccccCCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECCC
Confidence 45788999999999887542211000 13567899999999999999888 56666777788764 7777743
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC-CCCCChhHHHHHHhccCC
Q psy2719 356 SRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL-RDGMNLVAKEYVACQIRE 434 (808)
Q Consensus 356 ~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~-~EG~gLv~~Eama~~~~~ 434 (808)
. . .+++++. .. ..| .+.|.++ ++..+|+.||++|+||. .|||+++++|||||+
T Consensus 269 ~-----~-----~~~~~l~----~~------~~V-~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G--- 322 (397)
T TIGR03087 269 P-----S-----PAVRALA----AL------PGV-TVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMA--- 322 (397)
T ss_pred C-----h-----HHHHHhc----cC------CCe-EEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcC---
Confidence 2 1 1223321 11 124 4568886 68899999999999996 699999999999996
Q ss_pred CceEEEcCCCCCcccc---CceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHH
Q psy2719 435 PGVLILSPFAGAGGMM---HEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l---~~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 507 (808)
.|+|+|..++ .... ..|++++ .|++++|++|.+++++ ++.+++..+++++++ +.++|+..++++.+.+.
T Consensus 323 -~PVV~t~~~~-~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~-~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 323 -KPVVASPEAA-EGIDALPGAELLVA-ADPADFAAAILALLAN-PAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred -CCEEecCccc-ccccccCCcceEeC-CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 4688887532 2221 2488886 8999999999999984 455666667778777 57899999998877664
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.9e-16 Score=172.88 Aligned_cols=172 Identities=19% Similarity=0.214 Sum_probs=129.8
Q ss_pred EEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHH
Q psy2719 283 VKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLE 362 (808)
Q Consensus 283 v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~ 362 (808)
..++|+|+|.+.|.+.. ...++++++||+.+.||++.+++|++++ | + .|+++|.+ ++
T Consensus 176 ~~vi~~~~d~~~~~~~~---------~~~~~il~~G~~~~~K~~~~li~a~~~~----~-~----~l~ivG~g-----~~ 232 (351)
T cd03804 176 ATVIYPPVDTDRFTPAE---------EKEDYYLSVGRLVPYKRIDLAIEAFNKL----G-K----RLVVIGDG-----PE 232 (351)
T ss_pred cEEECCCCCHhhcCcCC---------CCCCEEEEEEcCccccChHHHHHHHHHC----C-C----cEEEEECC-----hh
Confidence 45789999998886532 1345799999999999999999999864 3 2 37777742 22
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcC
Q psy2719 363 YKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSP 442 (808)
Q Consensus 363 ~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~ 442 (808)
.+.+ ++ ... ..| .+.|.++.+++.++|+.||++++||. ||||++++|||||+ .|+|+|.
T Consensus 233 ~~~l----~~---~~~--------~~V-~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G----~Pvi~~~ 291 (351)
T cd03804 233 LDRL----RA---KAG--------PNV-TFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMASG----TPVIAYG 291 (351)
T ss_pred HHHH----Hh---hcC--------CCE-EEecCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcC----CCEEEeC
Confidence 2222 22 111 134 45799999999999999999999999 99999999999996 5699999
Q ss_pred CCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHH
Q psy2719 443 FAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSF 502 (808)
Q Consensus 443 ~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~ 502 (808)
.+|..+.+. .|++++|.|++++|++|..+++++. + ..+.+++.+..+++++..+++
T Consensus 292 ~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~-~---~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 292 KGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED-F---DPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred CCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc-c---CHHHHHHHHHhcCHHHHHHHh
Confidence 888887773 4999999999999999999998763 1 122344555667777665543
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.7e-16 Score=178.24 Aligned_cols=181 Identities=9% Similarity=0.059 Sum_probs=126.8
Q ss_pred cCcCccccchhhcCchhhhhc---CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHH
Q psy2719 288 IGIPFERFVQLAENAPENLKD---ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYK 364 (808)
Q Consensus 288 ~GID~~~f~~~~~~~~~~~~~---~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~ 364 (808)
+|||++.|.+...... ..+. ...+.+++||||.+.||+..+|+|++.+.++.|++ .|+++|. +++
T Consensus 521 nGVDte~F~P~~r~~~-~r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnv----rLvIVGD-----GP~-- 588 (794)
T PLN02501 521 HGVNPKFLKIGEKVAE-ERELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGF----NLDVFGN-----GED-- 588 (794)
T ss_pred ccccccccCCcchhHH-HHhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCe----EEEEEcC-----Ccc--
Confidence 5999999987543211 1111 12345899999999999999999999988877765 4777774 333
Q ss_pred HHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCC
Q psy2719 365 ALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFA 444 (808)
Q Consensus 365 ~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~ 444 (808)
++++++++.+++. .+.| .|..+ +...+|+.+||||+||.+||||+|++|||||+ .|||+|+..
T Consensus 589 --reeLe~la~eLgL--------~V~F-LG~~d--d~~~lyasaDVFVlPS~sEgFGlVlLEAMA~G----lPVVATd~p 651 (794)
T PLN02501 589 --AHEVQRAAKRLDL--------NLNF-LKGRD--HADDSLHGYKVFINPSISDVLCTATAEALAMG----KFVVCADHP 651 (794)
T ss_pred --HHHHHHHHHHcCC--------EEEe-cCCCC--CHHHHHHhCCEEEECCCcccchHHHHHHHHcC----CCEEEecCC
Confidence 3444555555432 2443 45543 34579999999999999999999999999995 568888887
Q ss_pred CCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 445 GAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 445 G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
|. +.+. +|++ +.|+++++++|.++|..++ .+ .... ....+||..-++++++.-
T Consensus 652 G~-e~V~~g~nGll--~~D~EafAeAI~~LLsd~~-~r-l~~~----a~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 652 SN-EFFRSFPNCLT--YKTSEDFVAKVKEALANEP-QP-LTPE----QRYNLSWEAATQRFMEYS 707 (794)
T ss_pred CC-ceEeecCCeEe--cCCHHHHHHHHHHHHhCch-hh-hHHH----HHhhCCHHHHHHHHHHhh
Confidence 64 3342 4554 4799999999999998764 22 1111 133678888777776643
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.4e-16 Score=173.42 Aligned_cols=161 Identities=11% Similarity=0.098 Sum_probs=119.3
Q ss_pred EEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHH-----------------hCCCccC
Q psy2719 283 VKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLE-----------------KHPEYVE 345 (808)
Q Consensus 283 v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~-----------------~~p~~~~ 345 (808)
+.++|+|+ .+.|.+.... ... +.....+|+++||+.+.||++.+++|+..+.. ++|+
T Consensus 188 i~vi~n~~-~~~f~~~~~~-~~~-~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~--- 261 (371)
T PLN02275 188 ATVLYDQP-PEFFRPASLE-IRL-RPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR--- 261 (371)
T ss_pred eEEECCCC-HHHcCcCCch-hcc-cCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC---
Confidence 77889984 5777654221 111 11334678899999999999999999988742 2454
Q ss_pred cEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECC---CCCCCCh
Q psy2719 346 KVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTP---LRDGMNL 422 (808)
Q Consensus 346 ~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S---~~EG~gL 422 (808)
+.|+++|.+ ++ ++++++++.+.+. .+++++.+.++.++++.+|+.||++|+|+ ..||||+
T Consensus 262 -i~l~ivG~G-----~~----~~~l~~~~~~~~l-------~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~ 324 (371)
T PLN02275 262 -LLFIITGKG-----PQ----KAMYEEKISRLNL-------RHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPM 324 (371)
T ss_pred -eEEEEEeCC-----CC----HHHHHHHHHHcCC-------CceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccH
Confidence 568888853 22 3444555554432 25777777899999999999999999853 2489999
Q ss_pred hHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHh
Q psy2719 423 VAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRAL 472 (808)
Q Consensus 423 v~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L 472 (808)
+++|||||+ .|+|+|..+|..+.+. +|++|+ |++++|++|.++|
T Consensus 325 ~llEAmA~G----~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 325 KVVDMFGCG----LPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred HHHHHHHCC----CCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 999999996 5688898888887773 599996 7999999998875
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-17 Score=189.24 Aligned_cols=105 Identities=30% Similarity=0.631 Sum_probs=80.9
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||++++++.+|+||||+|...++.. ..+ ........+++|.||+|+++++++||+||||++|||+||
T Consensus 22 ~gGl~~al~~~~~~~~~~Wvgw~g~~~~~~~-----~~~--~~~~~~~~~~~~~~v~l~~~~~~~~y~gf~n~~lWPl~H 94 (456)
T TIGR02400 22 AGGLAVALLGALKATGGVWFGWSGKTVEEDE-----GEP--FLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFH 94 (456)
T ss_pred CCCHHHHHHHHHhccCcEEEEeCCCCCCccc-----hhh--hHHHhhccCceEEEEECCHHHHHHHHHHhhhhhcchhhc
Confidence 5999999999999999999999996532110 000 000112346789999999999999999999999999999
Q ss_pred cCccccccCcccchhhhhhccc--------cccccceeeee
Q psy2719 81 SMPDRAVFNAETWKVSHLKMNG--------VTLEITGIWIG 113 (808)
Q Consensus 81 ~~~~~~~~~~~~w~~y~~k~~g--------~~~~~~~~wig 113 (808)
|+++.+.|++++|+.|+. +|. .......+||=
T Consensus 95 ~~~~~~~~~~~~w~~Y~~-vN~~fA~~i~~~~~~~d~vwvh 134 (456)
T TIGR02400 95 YRPDLIRYDRKAWEAYRR-VNRLFAEALAPLLQPGDIVWVH 134 (456)
T ss_pred ccccccccCHHHHHHHHH-HHHHHHHHHHHhCCCCCEEEEe
Confidence 999999999999999974 333 22344577864
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.8e-16 Score=153.28 Aligned_cols=154 Identities=29% Similarity=0.494 Sum_probs=116.2
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHh-CCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEK-HPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWS 387 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~-~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~ 387 (808)
.++++|+++||+.+.||+..+++|+..+.++ .|++ .|+++|.. + ....+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G~~-----~----~~~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNY----KLVIVGDG-----E----YKKELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTE----EEEEESHC-----C----HHHHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCe----EEEEEccc-----c----ccccccccccccccc------c
Confidence 5789999999999999999999999999875 5554 57777621 1 223344444444321 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHH
Q psy2719 388 PIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAA 464 (808)
Q Consensus 388 ~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~l 464 (808)
.+.+ .+.++.+++.++|+.||++|.||..||||++++|||+|+ .|+|+|..+|..+.+. +|++++|.|++++
T Consensus 74 ~i~~-~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g----~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIF-LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACG----CPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEE-EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-----EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred cccc-cccccccccccccccceeccccccccccccccccccccc----cceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 3444 577779999999999999999999999999999999995 6799999877777773 4899999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHh
Q psy2719 465 ANVLHRALCMPRDERELRMSQLR 487 (808)
Q Consensus 465 A~ai~~~L~~~~~e~~~r~~~~~ 487 (808)
+++|.++++++ +.+....++.+
T Consensus 149 ~~~i~~~l~~~-~~~~~l~~~~~ 170 (172)
T PF00534_consen 149 ADAIEKLLNDP-ELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHCCH-HHHHHHHHHhc
Confidence 99999999854 33333333333
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.6e-15 Score=164.00 Aligned_cols=195 Identities=21% Similarity=0.261 Sum_probs=144.0
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccc--cCChHHHHHHHHHHHHh-CCCccCcEEEEEE
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDY--TKGLVHRIKAFERLLEK-HPEYVEKVTFLQI 352 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~--~KGi~~~l~A~~~ll~~-~p~~~~~v~lv~i 352 (808)
..++.++|+|+|++.|.+... ...++. .++++++++++... .||+..+++|++.+.++ .| ++.++++
T Consensus 158 ~~~~~vi~ngi~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~~~~i~ 231 (365)
T cd03825 158 GIPIEVIPNGIDTTIFRPRDK--REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DIELVVF 231 (365)
T ss_pred CCceEEeCCCCcccccCCCcH--HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----CeEEEEe
Confidence 357889999999988865322 111211 44566766666654 89999999999988665 34 3557777
Q ss_pred EcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCC-HHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhc
Q psy2719 353 SVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIG-QEELAALYRDSAIALVTPLRDGMNLVAKEYVACQ 431 (808)
Q Consensus 353 g~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~-~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~ 431 (808)
|.+.. . .. . .++ ..+.+.|.++ .+++..+|+.||++++||..||||++++|||+|+
T Consensus 232 G~~~~---~----~~----~---~~~---------~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g 288 (365)
T cd03825 232 GASDP---E----IP----P---DLP---------FPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALACG 288 (365)
T ss_pred CCCch---h----hh----c---cCC---------CceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhcC
Confidence 64321 0 00 0 111 1244568887 8899999999999999999999999999999995
Q ss_pred cCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHH
Q psy2719 432 IREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 432 ~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 507 (808)
.|+|+|+.+|..+.+. .|+++++.|+++++++|.++++. ++++.+...++++.+ ..++++..++++++.++
T Consensus 289 ----~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 289 ----TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLAD-PDEREELGEAARELAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred ----CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 5689999888887774 49999999999999999999974 444555555666666 46799999998887765
Q ss_pred c
Q psy2719 508 A 508 (808)
Q Consensus 508 ~ 508 (808)
+
T Consensus 364 ~ 364 (365)
T cd03825 364 E 364 (365)
T ss_pred h
Confidence 4
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.4e-15 Score=155.88 Aligned_cols=187 Identities=18% Similarity=0.183 Sum_probs=117.7
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
+|++|+||||++. ..++++++++|++|+++ |+.+
T Consensus 1 li~~DlDGTLl~~------~~~~~~~~~ai~~l~~~----------------------------------------G~~~ 34 (225)
T TIGR02461 1 VIFTDLDGTLLPP------GYEPGPAREALEELKDL----------------------------------------GFPI 34 (225)
T ss_pred CEEEeCCCCCcCC------CCCchHHHHHHHHHHHC----------------------------------------CCEE
Confidence 5899999999982 13566799999999988 9999
Q ss_pred EEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCC--------------c-eeecCCChhHHHHHHHHHHHHHhhccC
Q psy2719 625 GIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDG--------------T-KFVHPVPKEYAEKLRQLIKALQDEVCH 687 (808)
Q Consensus 625 ~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~--------------~-~~~~~~~~~~~~~v~~i~~~~~~~~~~ 687 (808)
+++|||+...+..++... ..++|++||+.|+.+.+ . .+..+++.+ .++++++.+.+. .
T Consensus 35 vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~---~~~~il~~~~~~--~ 109 (225)
T TIGR02461 35 VFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPFPVGAGREVGNYEVIELGKPVA---KIRAALKEAENE--Y 109 (225)
T ss_pred EEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccccccccccCCCeEEEEcCCCHH---HHHHHHHHHHHh--c
Confidence 999999998887766421 23799999999987532 1 455667664 456666655542 0
Q ss_pred CCcEEEecCcE-EEEEcCcCChhh----------------HHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHH
Q psy2719 688 DGAWIENKGVL-LTFHYRETPIER----------------REYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRAS 750 (808)
Q Consensus 688 ~g~~ie~k~~~-~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av 750 (808)
+-.+...-... +. .+...+... .++...++.+.+...++.+..+..++++ ++ ++|||.|+
T Consensus 110 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ki~~~~~~e~~~~~~~~~~~~~~~~~~s~~~~~i-~~-~~sK~~al 186 (225)
T TIGR02461 110 GLKYYGNSTAEEVE-KLTGLPRELAPLAKRREYSETIFLWSREGWEAILVTARARGLKYTHGGRFYTV-HG-GSDKGKAI 186 (225)
T ss_pred CccchhcCCHHHHH-HHHCcCHHHHHHHHhhhcCCcccCCCHHHHHHHHHHHHHcCCcEEECCEEEEE-CC-CCCHHHHH
Confidence 10000000000 00 000000000 0111222333333446677666667775 66 99999999
Q ss_pred HHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeC
Q psy2719 751 IHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVD 790 (808)
Q Consensus 751 ~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~ 790 (808)
+.+++. +++..+. .++++|| |++||+.++ .| |+||
T Consensus 187 ~~l~~~-~~~~~~~-~~~i~~GD~~nD~~ml~~ag-~~--v~v~ 225 (225)
T TIGR02461 187 KRLLDL-YKLRPGA-IESVGLGDSENDFPMFEVVD-LA--FLVG 225 (225)
T ss_pred HHHHHH-hccccCc-ccEEEEcCCHHHHHHHHhCC-Cc--EecC
Confidence 999986 7664322 2799999 999999995 44 7664
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.2e-15 Score=162.34 Aligned_cols=168 Identities=20% Similarity=0.198 Sum_probs=123.5
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~ 359 (808)
..++.++|+|+|.+.+.+............++.+|+++||+.+.||+..+++|++.+.+++|++ .|+++|.+.
T Consensus 158 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~----~l~i~G~~~--- 230 (353)
T cd03811 158 PDKIEVIYNPIDIEEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDA----RLVILGDGP--- 230 (353)
T ss_pred ccccEEecCCcChhhcCcccchhhhcCCCCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCc----eEEEEcCCc---
Confidence 5688999999999887654321100000156789999999999999999999999998876654 477777432
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEE
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLI 439 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vV 439 (808)
.. +++++++...+.. +.+.+.|.+ +++..+|+.||++++||..||||++++|||+|+ .|+|
T Consensus 231 --~~----~~~~~~~~~~~~~-------~~v~~~g~~--~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G----~PvI 291 (353)
T cd03811 231 --LR----EELEALAKELGLA-------DRVHFLGFQ--SNPYPYLKAADLFVLSSRYEGFPNVLLEAMALG----TPVV 291 (353)
T ss_pred --cH----HHHHHHHHhcCCC-------ccEEEeccc--CCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhC----CCEE
Confidence 12 2333444444321 334455664 468899999999999999999999999999996 5699
Q ss_pred EcCCCCCccccC---ceEEECCCCHHHHH---HHHHHHhC
Q psy2719 440 LSPFAGAGGMMH---EALLVNPYEIDAAA---NVLHRALC 473 (808)
Q Consensus 440 lS~~~G~~~~l~---~~llvnP~d~~~lA---~ai~~~L~ 473 (808)
+|+.+|..+.+. .|+++++.|.++++ ++|...+.
T Consensus 292 ~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 331 (353)
T cd03811 292 ATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLL 331 (353)
T ss_pred EcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccC
Confidence 999988887774 49999999999994 55555554
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.2e-14 Score=158.90 Aligned_cols=203 Identities=16% Similarity=0.194 Sum_probs=146.5
Q ss_pred EEEEEEeecCcCccccchhhcC----------ch-------hhhhc------CCCeEEEEEcCccccCChHHHHHHHHHH
Q psy2719 280 TVHVKALPIGIPFERFVQLAEN----------AP-------ENLKD------ENLKVILGVDRLDYTKGLVHRIKAFERL 336 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~----------~~-------~~~~~------~~~~iil~V~Rl~~~KGi~~~l~A~~~l 336 (808)
.-++.-|-||||.+.+.|.... .+ .+..+ .+.+++..|+|+...||++.+++|+..+
T Consensus 240 ~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~ 319 (487)
T COG0297 240 SGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDEL 319 (487)
T ss_pred cccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHH
Confidence 3567778899998776653211 00 11111 3569999999999999999999999999
Q ss_pred HHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC
Q psy2719 337 LEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL 416 (808)
Q Consensus 337 l~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~ 416 (808)
+++. + .||++|.+. ..++..+..++.++.+++ .+.-..+..-...+|+.||++++||.
T Consensus 320 l~~~--~----~~vilG~gd-------~~le~~~~~la~~~~~~~---------~~~i~~~~~la~~i~agaD~~lmPSr 377 (487)
T COG0297 320 LEQG--W----QLVLLGTGD-------PELEEALRALASRHPGRV---------LVVIGYDEPLAHLIYAGADVILMPSR 377 (487)
T ss_pred HHhC--c----eEEEEecCc-------HHHHHHHHHHHHhcCceE---------EEEeeecHHHHHHHHhcCCEEEeCCc
Confidence 9986 3 377777542 257777888887765432 22233355556789999999999999
Q ss_pred CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-----------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Q psy2719 417 RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-----------EALLVNPYEIDAAANVLHRALCMPRDERELRMSQ 485 (808)
Q Consensus 417 ~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-----------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~ 485 (808)
.||+||+-++||.-+ +++|+++.+|.++.+. +|+++.|.|+++++.+|.+++..-..... .++.
T Consensus 378 fEPcGL~ql~amryG----tvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~ 452 (487)
T COG0297 378 FEPCGLTQLYAMRYG----TLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRK 452 (487)
T ss_pred CcCCcHHHHHHHHcC----CcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHH
Confidence 999999999999984 6899999999998873 38999999999999999999875322111 1333
Q ss_pred HhHHH--hcCCHHHHHHHHHHHHHcc
Q psy2719 486 LRHRE--QQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 486 ~~~~v--~~~~~~~W~~~~l~~l~~~ 509 (808)
.+... ..++|+.=+.++++--+.+
T Consensus 453 ~~~~~m~~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 453 VQPNAMGADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHhhcccccCchhHHHHHHHHHHHH
Confidence 33333 3556777777776665554
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.3e-16 Score=189.10 Aligned_cols=92 Identities=32% Similarity=0.706 Sum_probs=75.3
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||++++++.+|+||||+|...+.. ++.. ...+...+..++|+||+|+++++++||+||||++|||+||
T Consensus 27 ~ggl~~~l~~~~~~~~~~wvg~~g~~~~~~----~~~~--~~~~~~~~~~~~~~~v~l~~~~~~~~y~gf~n~~lWp~~H 100 (726)
T PRK14501 27 VGGLATGLRSFHERGGGLWVGWPGLDLEEE----SEEQ--RARIEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFH 100 (726)
T ss_pred CCchHHHHHHHhhcCCeEEEEeCCCCcccc----chhh--hhhhhhhccCceEEEEeCCHHHHHHHHHHhhhccccchhc
Confidence 599999999999999999999999653211 0000 0111223457899999999999999999999999999999
Q ss_pred cCccccccCcccchhhhh
Q psy2719 81 SMPDRAVFNAETWKVSHL 98 (808)
Q Consensus 81 ~~~~~~~~~~~~w~~y~~ 98 (808)
|+++...|++.+|+.|+.
T Consensus 101 ~~~~~~~~~~~~w~~Y~~ 118 (726)
T PRK14501 101 YFPEYTEFEDRFWESYER 118 (726)
T ss_pred ccCcccCcCHHHHHHHHH
Confidence 999999999999999974
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.5e-14 Score=149.39 Aligned_cols=189 Identities=16% Similarity=0.198 Sum_probs=122.7
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
|+||+|+||||++.. ..+++.++++|++|+++ |+.
T Consensus 2 KLIftDLDGTLLd~~-----~~~~~~a~~aL~~Lk~~----------------------------------------GI~ 36 (302)
T PRK12702 2 RLVLSSLDGSLLDLE-----FNSYGAARQALAALERR----------------------------------------SIP 36 (302)
T ss_pred cEEEEeCCCCCcCCC-----CcCCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 699999999999843 35788899999999988 999
Q ss_pred EEEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCCce---------------eecCCChhHHHHHHHHHHHHHhhc-
Q psy2719 624 IGIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDGTK---------------FVHPVPKEYAEKLRQLIKALQDEV- 685 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~~~---------------~~~~~~~~~~~~v~~i~~~~~~~~- 685 (808)
|+++|||+...+..+.... ..++|++||+.|+.+.... +...+... ...++.+++...+..
T Consensus 37 vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~~~~~~~~~~~~~~~~~~~~~~lg~~-y~~ir~~L~~l~~~~~ 115 (302)
T PRK12702 37 LVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEHYFPAGILDEQWQHRPPYYVCALGLP-YPCLRHILQQVRQDSH 115 (302)
T ss_pred EEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccccccccccccccccCCCceEEecCCC-HHHHHHHHHHHHHHhC
Confidence 9999999999887766421 2489999999998764311 01111111 234555555444321
Q ss_pred ---c------------CCCcEEE------ecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeC----
Q psy2719 686 ---C------------HDGAWIE------NKGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKP---- 740 (808)
Q Consensus 686 ---~------------~~g~~ie------~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p---- 740 (808)
. ..|.-.+ .++++-.+.+...+. ...+.+...++.++.|..|+.++.
T Consensus 116 ~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w~~~~~--------~~~~~~~~~g~~~~~GgRf~H~l~~~~~ 187 (302)
T PRK12702 116 LDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSYSGDPA--------RLREAFAQQEANLTQHLLRLHQLHFSDL 187 (302)
T ss_pred CCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEecCCHH--------HHHHHHHHcCCeEEecCceEEecccccc
Confidence 0 0011111 234444444444321 115556667888888887887773
Q ss_pred ----------------CCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC
Q psy2719 741 ----------------PVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS 791 (808)
Q Consensus 741 ----------------~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~ 791 (808)
+-+.+||.|++.|.+. |.-... ...++++| |++||+++. ++ |-|.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~-y~~~~~-~~~tiaLGDspND~~mLe~~D-~~--vvi~~ 253 (302)
T PRK12702 188 PQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDC-YQRHLG-PIKALGIGCSPPDLAFLRWSE-QK--VVLPS 253 (302)
T ss_pred cccccccccccccccccCCCCHHHHHHHHHHH-HHhccC-CceEEEecCChhhHHHHHhCC-ee--EEecC
Confidence 0167999999999986 543321 22578888 999999995 44 77764
|
|
| >KOG1111|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-14 Score=151.36 Aligned_cols=167 Identities=19% Similarity=0.297 Sum_probs=130.6
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCC
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRT 358 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~ 358 (808)
...++.+|||-++++.|.|.+.+.+ ..+...|+.++||.+.||++.+++.+.++.+++|+.+ ++++|.
T Consensus 167 ~p~kvsvIPnAv~~~~f~P~~~~~~----S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fii~GD---- 234 (426)
T KOG1111|consen 167 APAKVSVIPNAVVTHTFTPDAADKP----SADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FIIIGD---- 234 (426)
T ss_pred CHhHeeeccceeeccccccCccccC----CCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EEEecC----
Confidence 4578999999999999998544311 1445789999999999999999999999999999875 777763
Q ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceE
Q psy2719 359 DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 359 ~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~v 438 (808)
+|..-.+++-+++. +. ..+++ +.|.++.+++...|...|||+.||+.|.||++++||+.|+ -++
T Consensus 235 -GPk~i~lee~lEk~----~l------~~rV~-~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScG----L~V 298 (426)
T KOG1111|consen 235 -GPKRIDLEEMLEKL----FL------QDRVV-MLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCG----LPV 298 (426)
T ss_pred -CcccchHHHHHHHh----hc------cCceE-EecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCC----CEE
Confidence 44333344333333 11 12454 5699999999999999999999999999999999999995 457
Q ss_pred EEcCCCCCccccCce-EEECCCCHHHHHHHHHHHhC
Q psy2719 439 ILSPFAGAGGMMHEA-LLVNPYEIDAAANVLHRALC 473 (808)
Q Consensus 439 VlS~~~G~~~~l~~~-llvnP~d~~~lA~ai~~~L~ 473 (808)
|.+..+|..+.|... +...+-.++++++++.++++
T Consensus 299 VsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 299 VSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred EEeecCCccccCCccceeccCCChHHHHHHHHHHHH
Confidence 777777888888755 43555578899999888886
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.8e-15 Score=156.48 Aligned_cols=158 Identities=14% Similarity=0.277 Sum_probs=96.9
Q ss_pred CCCeEEEEeCCChhhHHHhcC---c-cceEEEcccceeEecCCCc----eeecCCChhHHH-HHHHHHHHHHhhccCCCc
Q psy2719 620 PDVNIGIISGRTLENLMKMVN---I-EKVTYAGSHGLEILHPDGT----KFVHPVPKEYAE-KLRQLIKALQDEVCHDGA 690 (808)
Q Consensus 620 pg~~v~I~SGR~~~~l~~~~~---~-~~~~li~~nG~~i~~~~~~----~~~~~~~~~~~~-~v~~i~~~~~~~~~~~g~ 690 (808)
+++.++++|||+.....+.+. + .+.++|+++|+.|+..... .|...+...|.. .+++++..+ ++.
T Consensus 34 ~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~------~~l 107 (247)
T PF05116_consen 34 PEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAEL------PGL 107 (247)
T ss_dssp CGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCH------CCE
T ss_pred CCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHh------hCc
Confidence 489999999999998877663 2 3468999999999873211 122233333322 233333322 222
Q ss_pred EE----EecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCee--E-EccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCC
Q psy2719 691 WI----ENKGVLLTFHYRETPIERREYIIDRASQIFLEAGFE--P-HNALMAIEAKPPVKWDQGRASIHILRTMYGVDWS 763 (808)
Q Consensus 691 ~i----e~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v-~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~ 763 (808)
.. +...+.+++.+..... ...++++++.+...++. + .++..+++|.|+ ++|||.||++|+++ ++++.+
T Consensus 108 ~~q~~~~q~~~k~sy~~~~~~~---~~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~-~a~K~~Al~~L~~~-~~~~~~ 182 (247)
T PF05116_consen 108 RPQPESEQRPFKISYYVDPDDS---ADILEEIRARLRQRGLRVNVIYSNGRDLDILPK-GASKGAALRYLMER-WGIPPE 182 (247)
T ss_dssp EEGGCCCGCCTCECEEEETTSH---CHHHHHHHHHHHCCTCEEEEEECTCCEEEEEET-T-SHHHHHHHHHHH-HT--GG
T ss_pred ccCCccccCCeeEEEEEecccc---hhHHHHHHHHHHHcCCCeeEEEccceeEEEccC-CCCHHHHHHHHHHH-hCCCHH
Confidence 21 2234455665544332 22356677777665554 3 467789999998 99999999999997 899865
Q ss_pred cceeEEEEe----CHHHHHhccCCccEEEeCCC-Cc
Q psy2719 764 ERVRIIYAG----NEDAMLALQGIACTFRVDSS-PT 794 (808)
Q Consensus 764 ~~~~via~G----D~~Mf~~~~~~~~~vav~~~-~~ 794 (808)
.++++| |++||... ..+|.|+|+ ++
T Consensus 183 ---~vl~aGDSgND~~mL~~~---~~~vvV~Na~~e 212 (247)
T PF05116_consen 183 ---QVLVAGDSGNDLEMLEGG---DHGVVVGNAQPE 212 (247)
T ss_dssp ---GEEEEESSGGGHHHHCCS---SEEEE-TTS-HH
T ss_pred ---HEEEEeCCCCcHHHHcCc---CCEEEEcCCCHH
Confidence 799999 99999554 345999984 44
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.8e-16 Score=178.42 Aligned_cols=106 Identities=35% Similarity=0.733 Sum_probs=71.8
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||.+++++.+|+||||+|...+... .. ..........+++|+||+|+++++++||+||||++|||+||
T Consensus 31 ~ggL~~al~~l~~~~~~~WvGw~g~~~~~~~-----~~-~~~v~~~~~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfH 104 (474)
T PF00982_consen 31 AGGLVSALDPLLKKRGGIWVGWPGVDVDEEE-----DE-QDRVEPRLLDEYNCVPVFLSPEEYDGYYNGFCNQVLWPLFH 104 (474)
T ss_dssp S-HHHHHHHHHHHHH-EEEEEEEEEES-TTS---------EEEE---ETTEEEEEEEE-HHHHHHHTTTHHHHTHHHHHT
T ss_pred CCcHHHHHHHHHhcCCCEEEEeCCCcCcccc-----cc-ccchhhhcccCceEEEEEcCHHHHHHHHHhhhhhccCcccc
Confidence 5899999999999999999999987653211 00 01111233568899999999999999999999999999999
Q ss_pred cCcc----ccccCcccchhhhhhccc--------cccccceeeee
Q psy2719 81 SMPD----RAVFNAETWKVSHLKMNG--------VTLEITGIWIG 113 (808)
Q Consensus 81 ~~~~----~~~~~~~~w~~y~~k~~g--------~~~~~~~~wig 113 (808)
|+.+ ...|+.++|+.|+. +|. ...+...+||=
T Consensus 105 y~~~~~~~~~~~~~~~w~~Y~~-vN~~FA~~i~~~~~~~D~VWVh 148 (474)
T PF00982_consen 105 YRLDSRPDLARFEEEWWEAYKR-VNRRFADAIAEVYRPGDLVWVH 148 (474)
T ss_dssp T-GG----G----HHHHHHHHH-HHHHHHHHHGGG--TT-EEEEE
T ss_pred cccccccccchhhHHHHHHHHH-HHHHHHHHHHHhCcCCCEEEEe
Confidence 7655 89999999999974 333 23455677875
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.4e-16 Score=185.30 Aligned_cols=89 Identities=34% Similarity=0.662 Sum_probs=70.7
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||.++ +..+|+||||+|...+.. ++ .......+.+++|+||+|+++++++||+||||++|||+||
T Consensus 121 ~GGLvsaL~~~-~~~~~~WVGw~g~~~~~~------~~--~~~~~~~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfH 191 (934)
T PLN03064 121 AGGLVSALLGV-KEFEARWIGWAGVNVPDE------VG--QKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFH 191 (934)
T ss_pred CCCcHHHhccc-ccCCeEEEeeCCCCCCCc------ch--hHHHHHHhccCceEEEeCCHHHHHHHHHHhhhcccchhhc
Confidence 59999999998 889999999999653211 00 0111223457899999999999999999999999999999
Q ss_pred cC-------ccccccCcccchhhhh
Q psy2719 81 SM-------PDRAVFNAETWKVSHL 98 (808)
Q Consensus 81 ~~-------~~~~~~~~~~w~~y~~ 98 (808)
|+ ++..+|+..+|+.|+.
T Consensus 192 y~~~~~~~~~~~~~~~~~~w~~Y~~ 216 (934)
T PLN03064 192 YLGLPQEDRLATTRSFQSQFAAYKK 216 (934)
T ss_pred CcCCCcccccccccccHHHHHHHHH
Confidence 98 3456688899999974
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-15 Score=173.53 Aligned_cols=104 Identities=38% Similarity=0.711 Sum_probs=82.5
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||.+++++.+++||||+|...+... +. ........+++|.||+|+++++++||+||||++|||+||
T Consensus 27 ~ggl~~~l~~~~~~~~~~wvg~~~~~~~~~~-----~~---~~~~~~~~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H 98 (460)
T cd03788 27 AGGLATALKGLLKRTGGLWVGWSGIEEDEEE-----ED---EVSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFH 98 (460)
T ss_pred CCcHHHHHHHHHhcCCeEEEEeCCCCCCccc-----ch---hhhhhhcCCceEEEeeCCHHHHHHHHHHhhhhhcchhhc
Confidence 5999999999999999999999987643211 00 011223457899999999999999999999999999999
Q ss_pred cCccccccCcccchhhhhhccc--------cccccceeeee
Q psy2719 81 SMPDRAVFNAETWKVSHLKMNG--------VTLEITGIWIG 113 (808)
Q Consensus 81 ~~~~~~~~~~~~w~~y~~k~~g--------~~~~~~~~wig 113 (808)
|+++...|+.++|+.|.. +|. .......+||-
T Consensus 99 ~~~~~~~~~~~~w~~Y~~-vN~~fa~~i~~~~~~~d~iwih 138 (460)
T cd03788 99 YRLDLARFDREDWEAYVR-VNRKFADAIAEVLRPGDLVWVH 138 (460)
T ss_pred CCCCccccCHHHHHHHHH-HHHHHHHHHHHhcCCCCEEEEe
Confidence 999999999999999974 333 22345677876
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.4e-13 Score=153.64 Aligned_cols=164 Identities=16% Similarity=0.070 Sum_probs=112.6
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCC-CCCC-
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFS-KPNW- 386 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g-~~~~- 386 (808)
.++++|+++++. .|+...+++||+++.+++|++ .|+++|. +++. .+++++++.+.+..+. ..+.
T Consensus 231 ~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~----~liivG~-----g~~r---~~~l~~~~~~~gl~~~~~~~~~ 296 (425)
T PRK05749 231 PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNL----LLILVPR-----HPER---FKEVEELLKKAGLSYVRRSQGE 296 (425)
T ss_pred CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCc----EEEEcCC-----Chhh---HHHHHHHHHhCCCcEEEccCCC
Confidence 466788898875 688999999999998888876 3776652 3332 1334444444332110 0000
Q ss_pred ----ccEEEEcCCCCHHHHHHHHHhcCeEEE-CCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcc----cc-CceEEE
Q psy2719 387 ----SPIRYIFGCIGQEELAALYRDSAIALV-TPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGG----MM-HEALLV 456 (808)
Q Consensus 387 ----~~v~~~~~~v~~~el~aly~~Adv~v~-~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~----~l-~~~llv 456 (808)
...+++.+ +..++..+|+.||++++ +|+.||+|++++|||||+ .|+|++...|... .+ .+|.++
T Consensus 297 ~~~~~~~v~l~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G----~PVI~g~~~~~~~e~~~~~~~~g~~~ 370 (425)
T PRK05749 297 PPSADTDVLLGD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG----VPVISGPHTFNFKEIFERLLQAGAAI 370 (425)
T ss_pred CCCCCCcEEEEe--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC----CCEEECCCccCHHHHHHHHHHCCCeE
Confidence 01223322 35799999999999655 688899999999999996 4688776544322 22 358888
Q ss_pred CCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcC
Q psy2719 457 NPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQL 493 (808)
Q Consensus 457 nP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~ 493 (808)
+|.|++++|++|.++++. ++.+.++.+++++++.++
T Consensus 371 ~~~d~~~La~~l~~ll~~-~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 371 QVEDAEDLAKAVTYLLTD-PDARQAYGEAGVAFLKQN 406 (425)
T ss_pred EECCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhC
Confidence 899999999999999974 556666667778777655
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.2e-15 Score=167.90 Aligned_cols=104 Identities=34% Similarity=0.659 Sum_probs=82.6
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||.++++..+|+|+||+|..... . +..+ .......+++..||.++++++++||+||||++|||+||
T Consensus 43 ~ggL~~~l~~~~~~~~~~W~gw~G~~~~~-~----~~~~---~~~~~~~~~~~~~v~l~~~~~~~~Y~~fsn~iLWP~~H 114 (486)
T COG0380 43 AGGLVTALKPLLRVDGGTWIGWSGTTGPT-D----ESSD---DLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFH 114 (486)
T ss_pred CcchhhhcchhhHhhcceEEecCceeccc-c----ccch---hhhhccccceEEEEecCHHHHHHHHHHhhHhhhcceee
Confidence 69999999999999999999999976521 0 0000 01122347899999999999999999999999999999
Q ss_pred cCccccccCcccchhhhhhccc--------cccccceeeee
Q psy2719 81 SMPDRAVFNAETWKVSHLKMNG--------VTLEITGIWIG 113 (808)
Q Consensus 81 ~~~~~~~~~~~~w~~y~~k~~g--------~~~~~~~~wig 113 (808)
|+.+...|++.+|+.|+. +|. +.+....+||=
T Consensus 115 y~~~~~~~~~~~w~~Y~~-vN~~FAd~i~~~~~~gDiIWVh 154 (486)
T COG0380 115 YFIDDVAYERNWWDAYVK-VNRKFADKIVEIYEPGDIIWVH 154 (486)
T ss_pred eecCccccchHHHHHHHH-HHHHHHHHHHHhcCCCCEEEEE
Confidence 999999999999999974 333 22455677875
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.2e-15 Score=181.73 Aligned_cols=90 Identities=23% Similarity=0.431 Sum_probs=70.7
Q ss_pred CCchhHhhHHHHhc--CCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccc
Q psy2719 1 AGGLVTAVAPVVID--CKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPL 78 (808)
Q Consensus 1 ~GGL~~al~~~~~~--~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl 78 (808)
+|||+++|++++.. .+++||||+|...+. ++. .......+.+|+|+||+|+++++++||+||||++|||+
T Consensus 89 ~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~-------~~~-~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPl 160 (854)
T PLN02205 89 ENSLLLQLKDGLGDDEIEVIYVGCLKEEIHL-------NEQ-EEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPL 160 (854)
T ss_pred CCchHHHHhhhhhcccCceEEEEecCCCCCc-------hhh-hhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccch
Confidence 59999999999954 889999999864321 010 11111224568999999999999999999999999999
Q ss_pred cccCccc-----cccCcccchhhhh
Q psy2719 79 FHSMPDR-----AVFNAETWKVSHL 98 (808)
Q Consensus 79 ~H~~~~~-----~~~~~~~w~~y~~ 98 (808)
|||++.. .+|++.+|+.|+.
T Consensus 161 fH~~~~~~~~~~~~f~~~~w~~Y~~ 185 (854)
T PLN02205 161 FHYMLPLSPDLGGRFNRSLWQAYVS 185 (854)
T ss_pred hccCCCCCccccccccHHHHHHHHH
Confidence 9999643 3899999999974
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4e-15 Score=179.55 Aligned_cols=88 Identities=34% Similarity=0.678 Sum_probs=67.8
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||.++ ++.+|+||||+|...... ++ .......+.+++|+||+| ++++++||+||||++|||+||
T Consensus 38 ~ggl~~al~~~-~~~~~~Wvgw~g~~~~~~------~~--~~~~~~~~~~~~~~pv~l-~~~~~~~Y~gf~n~~LWPlfH 107 (797)
T PLN03063 38 PGGLVSALLGV-KEFETKWIGWPGVDVHDE------IG--KAALTESLAEKGCIPVFL-NEVFDQYYNGYCNNILWPIFH 107 (797)
T ss_pred CCCHHHHHHHH-HhcCceEEEeCCCcCCcc------cc--hhHHHHHhhcCCeEEeeh-HHHHHHHHHHHHhhhcchhhc
Confidence 59999999998 778999999999642210 01 111122345789999999 999999999999999999999
Q ss_pred cCc-------cccccCcccchhhhh
Q psy2719 81 SMP-------DRAVFNAETWKVSHL 98 (808)
Q Consensus 81 ~~~-------~~~~~~~~~w~~y~~ 98 (808)
|++ +...+...+|+.|+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~w~~Y~~ 132 (797)
T PLN03063 108 YMGLPQEDRHDATRTFESQYDAYKK 132 (797)
T ss_pred CcCCCcccccccccccHHHHHHHHH
Confidence 982 345566789999874
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.47 E-value=2e-12 Score=144.79 Aligned_cols=192 Identities=17% Similarity=0.205 Sum_probs=128.0
Q ss_pred EEEEEeecCcCccccchhhcCch--hhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAP--ENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRT 358 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~--~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~ 358 (808)
.++.++|+|+|.+.|.+...... +.....++++|+++|++.+.++++ +|.++ .+.+|++ .|+++|....
T Consensus 173 ~~i~~i~ngvd~~~f~~~~~~~~~~~~~~~~~~~~i~y~G~l~~~~d~~-ll~~l---a~~~p~~----~~vliG~~~~- 243 (373)
T cd04950 173 PNVVLVPNGVDYEHFAAARDPPPPPADLAALPRPVIGYYGAIAEWLDLE-LLEAL---AKARPDW----SFVLIGPVDV- 243 (373)
T ss_pred CCEEEcccccCHHHhhcccccCCChhHHhcCCCCEEEEEeccccccCHH-HHHHH---HHHCCCC----EEEEECCCcC-
Confidence 56888999999999976432211 111115678999999999966664 34333 3457776 4777774310
Q ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC-----CCCCChhHHHHHHhccC
Q psy2719 359 DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL-----RDGMNLVAKEYVACQIR 433 (808)
Q Consensus 359 ~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~-----~EG~gLv~~Eama~~~~ 433 (808)
.. +. ..+ .. ...|+ +.|.++.++++++|+.||++++|+. .+++++.++||||||.
T Consensus 244 -~~---~~----~~~----~~------~~nV~-~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~- 303 (373)
T cd04950 244 -SI---DP----SAL----LR------LPNVH-YLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK- 303 (373)
T ss_pred -cc---Ch----hHh----cc------CCCEE-EeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-
Confidence 00 01 111 10 12444 5699999999999999999999985 3578999999999964
Q ss_pred CCceEEEcCCCCCccccCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 434 EPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 434 ~~g~vVlS~~~G~~~~l~~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
|+|+|....+.+. .++..+.+.|+++++++|.++|..+..++..+ ..+.++++||+.=++.++..|.+
T Consensus 304 ---PVVat~~~~~~~~-~~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~---~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 304 ---PVVATPLPEVRRY-EDEVVLIADDPEEFVAAIEKALLEDGPARERR---RLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred ---CEEecCcHHHHhh-cCcEEEeCCCHHHHHHHHHHHHhcCCchHHHH---HHHHHHHCCHHHHHHHHHHHHHh
Confidence 5777765443332 23444456799999999999876544333222 22267889999988888876654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.3e-11 Score=133.17 Aligned_cols=193 Identities=11% Similarity=0.046 Sum_probs=123.4
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHh----CCCccCcEEEE
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEK----HPEYVEKVTFL 350 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~----~p~~~~~v~lv 350 (808)
...++.+++++||.+.+.+. ......+++ +++++|+++||....|++..+++++..++.. .|+.+ .++
T Consensus 171 ~~~ki~v~g~~v~~~f~~~~-~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~---~~v 246 (382)
T PLN02605 171 EPSQIRVYGLPIRPSFARAV-RPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ---VVV 246 (382)
T ss_pred CHHHEEEECcccCHhhccCC-CCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---EEE
Confidence 44667788888886544322 111233332 4678999999999999999999999876521 23331 234
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHh
Q psy2719 351 QISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVAC 430 (808)
Q Consensus 351 ~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~ 430 (808)
++|. + + +++++++++.. + ..| .+.|+++ +++.+|++||++|.+| .|++++|||||
T Consensus 247 i~G~----~-~---~~~~~L~~~~~--~--------~~v-~~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EAma~ 301 (382)
T PLN02605 247 ICGR----N-K---KLQSKLESRDW--K--------IPV-KVRGFVT--NMEEWMGACDCIITKA----GPGTIAEALIR 301 (382)
T ss_pred EECC----C-H---HHHHHHHhhcc--c--------CCe-EEEeccc--cHHHHHHhCCEEEECC----CcchHHHHHHc
Confidence 3431 1 1 23344433310 1 133 3567774 7999999999999866 37899999999
Q ss_pred ccCCCceEEEcCCC-----CCcccc-CceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHH
Q psy2719 431 QIREPGVLILSPFA-----GAGGMM-HEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLS 504 (808)
Q Consensus 431 ~~~~~g~vVlS~~~-----G~~~~l-~~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 504 (808)
+ .|+|++... |-++.+ .+|.-+.+.|+++++++|.++|.++++.++++.+++++....+.+..=++..++
T Consensus 302 g----~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 302 G----LPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHE 377 (382)
T ss_pred C----CCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence 6 468888752 323333 333334468999999999999986455555555666776666655555544443
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.5e-11 Score=130.74 Aligned_cols=200 Identities=25% Similarity=0.355 Sum_probs=141.6
Q ss_pred EEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChH
Q psy2719 282 HVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVL 361 (808)
Q Consensus 282 ~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~ 361 (808)
++.++|+|++++.+..... .........+++++||+.+.||+...++|+..+.+..|+ +.++.+|.+...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~~g~~~~~--- 242 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARI---GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIVGDGPER--- 242 (381)
T ss_pred CceEecCCcCHHHcCcccc---CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEEEcCCCcc---
Confidence 5677899999988765200 011001136899999999999999999999999887665 446666643311
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEc
Q psy2719 362 EYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILS 441 (808)
Q Consensus 362 ~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS 441 (808)
...+..++...+. .+.+.+.|.++.+++..+|+.||++++||..||||++++|||||+ .|+|+|
T Consensus 243 -----~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g----~pvi~~ 306 (381)
T COG0438 243 -----REELEKLAKKLGL-------EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG----TPVIAS 306 (381)
T ss_pred -----HHHHHHHHHHhCC-------CCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC----CcEEEC
Confidence 1222223333332 123344788888889999999999999999999999999999995 468999
Q ss_pred CCCCCccccCc---eEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHHc
Q psy2719 442 PFAGAGGMMHE---ALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 442 ~~~G~~~~l~~---~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 508 (808)
...|..+.+.+ |+++++.|.+++++++..++++. +.+.......++.+ ..+++..-++.+.+.+..
T Consensus 307 ~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (381)
T COG0438 307 DVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYEE 376 (381)
T ss_pred CCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 98888887753 78888888999999999999875 33333333233334 567777766665555544
|
|
| >KOG0853|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.9e-11 Score=136.22 Aligned_cols=213 Identities=15% Similarity=0.117 Sum_probs=151.3
Q ss_pred EEEeecCcCccccchhhcCc-----hhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCcc-CcEEEEEE
Q psy2719 283 VKALPIGIPFERFVQLAENA-----PENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYV-EKVTFLQI 352 (808)
Q Consensus 283 v~v~p~GID~~~f~~~~~~~-----~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~-~~v~lv~i 352 (808)
+.+...+||.+.+.+..... ..++.. ....++..+-|+.|.||+...|.||..+...-|+.. ....++..
T Consensus 236 ~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~ 315 (495)
T KOG0853|consen 236 ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVA 315 (495)
T ss_pred cceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEe
Confidence 45556778877665321110 111111 336789999999999999999999999988776411 13445545
Q ss_pred EcC-CCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhc
Q psy2719 353 SVP-SRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQ 431 (808)
Q Consensus 353 g~~-~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~ 431 (808)
|.+ +.+...+..+...++.+++++.+.. | .++++....++.+...+++.+.+...+|..|.||+|++|||||+
T Consensus 316 g~~G~d~~~sen~~~~~el~~lie~~~l~-g-----~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~g 389 (495)
T KOG0853|consen 316 GSRGYDERDSENVEYLKELLSLIEEYDLL-G-----QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACG 389 (495)
T ss_pred cCCCccccchhhHHHHHHHHHHHHHhCcc-C-----ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcC
Confidence 532 2233344445666777777776421 2 45667778888888888888889999998899999999999996
Q ss_pred cCCCceEEEcCCCCCccccC---ceEEECCCCHH---HHHHHHHHHhCCCHHHHHHHHHHHhHHHhc-CCHHHHHHHHHH
Q psy2719 432 IREPGVLILSPFAGAGGMMH---EALLVNPYEID---AAANVLHRALCMPRDERELRMSQLRHREQQ-LDVNHWMNSFLS 504 (808)
Q Consensus 432 ~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~---~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l~ 504 (808)
.|+|++..+|..+++. +|++++| +.+ .+|++|.++.+.+ +.+.+...+.+++|.+ +++....+++..
T Consensus 390 ----lPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p-~l~~~~~~~G~~rV~e~fs~~~~~~ri~~ 463 (495)
T KOG0853|consen 390 ----LPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDP-ELWARMGKNGLKRVKEMFSWQHYSERIAS 463 (495)
T ss_pred ----CCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 5699999999999884 5999999 666 5999999999864 4577777788999987 666444444444
Q ss_pred HHH
Q psy2719 505 SMG 507 (808)
Q Consensus 505 ~l~ 507 (808)
.+.
T Consensus 464 ~~~ 466 (495)
T KOG0853|consen 464 VLG 466 (495)
T ss_pred HhH
Confidence 443
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.2e-10 Score=109.31 Aligned_cols=188 Identities=20% Similarity=0.239 Sum_probs=116.9
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++||+|+||||+++.-. ++.....|.+|.+. |+
T Consensus 7 ~~lIFtDlD~TLl~~~ye------~~pA~pv~~el~d~----------------------------------------G~ 40 (274)
T COG3769 7 PLLIFTDLDGTLLPHSYE------WQPAAPVLLELKDA----------------------------------------GV 40 (274)
T ss_pred ceEEEEcccCcccCCCCC------CCccchHHHHHHHc----------------------------------------CC
Confidence 479999999999994332 34455677788776 99
Q ss_pred eEEEEeCCChhhH---HHhcCccceEEEcccceeEecCCCce-e-----------ecCCChhHHHHHHHHHHHHHhhccC
Q psy2719 623 NIGIISGRTLENL---MKMVNIEKVTYAGSHGLEILHPDGTK-F-----------VHPVPKEYAEKLRQLIKALQDEVCH 687 (808)
Q Consensus 623 ~v~I~SGR~~~~l---~~~~~~~~~~li~~nG~~i~~~~~~~-~-----------~~~~~~~~~~~v~~i~~~~~~~~~~ 687 (808)
.|++||..+..++ .+.++.++.++|+|||+.|+.|.+.. + ...+.. -.+.+++.++.+.+.
T Consensus 41 ~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~~~~~~~~~~r~~~g~~~~elg~-~l~~ire~l~kLee~--- 116 (274)
T COG3769 41 PVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPKGWFPFDGKPREISGISHIELGK-VLEKIREKLDKLEEH--- 116 (274)
T ss_pred eEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecccccccCCCCceecceEeeehhh-hHHHHHHHHHHHHHH---
Confidence 9999999998765 44567777899999999999764321 1 001111 012233333333321
Q ss_pred CCc-EEE----------------------ecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCC
Q psy2719 688 DGA-WIE----------------------NKGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKW 744 (808)
Q Consensus 688 ~g~-~ie----------------------~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v 744 (808)
-|. ++. .++++.++-.+..+ +...+....+...++.++.|..+.-|... ..
T Consensus 117 ~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs~d-----~~~~~~~~~L~e~glt~v~garf~~v~~a-s~ 190 (274)
T COG3769 117 FGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRSSD-----ERMAQFTARLNERGLTFVHGARFWHVLDA-SA 190 (274)
T ss_pred hCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeecccc-----hHHHHHHHHHHhcCceEEeccceEEEecc-cc
Confidence 111 110 01111111111111 22344555566668998888888888765 66
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS 791 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~ 791 (808)
.||.|+..+++.+...... + -+++.| |.+||+... ++|.|++
T Consensus 191 gKg~Aa~~ll~~y~rl~~~-r-~t~~~GDg~nD~Pl~ev~d---~AfiV~~ 236 (274)
T COG3769 191 GKGQAANWLLETYRRLGGA-R-TTLGLGDGPNDAPLLEVMD---YAFIVKG 236 (274)
T ss_pred CccHHHHHHHHHHHhcCce-e-EEEecCCCCCcccHHHhhh---hheeecc
Confidence 7999999999964444433 1 489999 999999984 3488884
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.1e-09 Score=117.18 Aligned_cols=191 Identities=15% Similarity=0.100 Sum_probs=126.3
Q ss_pred eEEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHH-HHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRI-KAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l-~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
...++.++|+|+|.+.+.+.... .......+.++|+.+|+..+.|++..++ +|++++.+. | ..++++|.+.
T Consensus 152 ~~~~i~vi~n~v~~~~~~~~~~~-~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~~-~-----~~~~~~G~g~- 223 (357)
T PRK00726 152 FKPKAVVTGNPVREEILALAAPP-ARLAGREGKPTLLVVGGSQGARVLNEAVPEALALLPEA-L-----QVIHQTGKGD- 223 (357)
T ss_pred CCCCEEEECCCCChHhhcccchh-hhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhhC-c-----EEEEEcCCCc-
Confidence 34678999999998766542111 1110014677899999999999987776 888877432 2 2355555321
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
.+++++.+ . .+ . . +.+.+++ +++..+|+.||+++.+| | +.+++|||+|++ |
T Consensus 224 -----~~~~~~~~----~-~~-------~-~-v~~~g~~--~~~~~~~~~~d~~i~~~---g-~~~~~Ea~~~g~----P 274 (357)
T PRK00726 224 -----LEEVRAAY----A-AG-------I-N-AEVVPFI--DDMAAAYAAADLVICRA---G-ASTVAELAAAGL----P 274 (357)
T ss_pred -----HHHHHHHh----h-cC-------C-c-EEEeehH--hhHHHHHHhCCEEEECC---C-HHHHHHHHHhCC----C
Confidence 12232222 1 11 1 1 3345665 68899999999999887 3 589999999965 4
Q ss_pred EEEcCCCCC--------cccc---CceEEECCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHH
Q psy2719 438 LILSPFAGA--------GGMM---HEALLVNPYE--IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLS 504 (808)
Q Consensus 438 vVlS~~~G~--------~~~l---~~~llvnP~d--~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 504 (808)
+|++...|. ++.+ ..|++++|.| +++++++|.+++++ ++.+++..++.+++....+...=++.+++
T Consensus 275 vv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (357)
T PRK00726 275 AILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMAEAARALGKPDAAERLADLIEE 353 (357)
T ss_pred EEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCcCHHHHHHHHHHH
Confidence 666544321 1233 2488999988 99999999999986 45555566667777777777777777766
Q ss_pred HHH
Q psy2719 505 SMG 507 (808)
Q Consensus 505 ~l~ 507 (808)
.++
T Consensus 354 ~~~ 356 (357)
T PRK00726 354 LAR 356 (357)
T ss_pred Hhh
Confidence 554
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.5e-08 Score=113.74 Aligned_cols=164 Identities=13% Similarity=0.131 Sum_probs=108.5
Q ss_pred CCe-EEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy2719 310 NLK-VILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSP 388 (808)
Q Consensus 310 ~~~-iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~ 388 (808)
+++ ++++.|++...||+..+++++.+ .|++ .++++++. +. .+++++++++.+.+ ..
T Consensus 201 ~~~~il~~~G~~~~~k~~~~li~~l~~----~~~~----~~viv~G~---~~----~~~~~l~~~~~~~~--------~~ 257 (380)
T PRK13609 201 NKKILLIMAGAHGVLGNVKELCQSLMS----VPDL----QVVVVCGK---NE----ALKQSLEDLQETNP--------DA 257 (380)
T ss_pred CCcEEEEEcCCCCCCcCHHHHHHHHhh----CCCc----EEEEEeCC---CH----HHHHHHHHHHhcCC--------Cc
Confidence 444 55667899889999999988742 3544 46656532 12 23445555543322 13
Q ss_pred EEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCC-CCCc----ccc-CceEEECCCCHH
Q psy2719 389 IRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPF-AGAG----GMM-HEALLVNPYEID 462 (808)
Q Consensus 389 v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~-~G~~----~~l-~~~llvnP~d~~ 462 (808)
|++ .|++ +++..+|++||+++. ++.|++++|||||+. |+|++.. .|.. ..+ ..|..+.+.|++
T Consensus 258 v~~-~g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~----PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~ 326 (380)
T PRK13609 258 LKV-FGYV--ENIDELFRVTSCMIT----KPGGITLSEAAALGV----PVILYKPVPGQEKENAMYFERKGAAVVIRDDE 326 (380)
T ss_pred EEE-Eech--hhHHHHHHhccEEEe----CCCchHHHHHHHhCC----CEEECCCCCCcchHHHHHHHhCCcEEEECCHH
Confidence 554 4776 468899999999874 456999999999964 5777663 3321 122 235556678999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 463 AAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 463 ~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
+++++|.++++. ++.+.++.++.++....++++..++.+++.+..
T Consensus 327 ~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 327 EVFAKTEALLQD-DMKLLQMKEAMKSLYLPEPADHIVDDILAENHV 371 (380)
T ss_pred HHHHHHHHHHCC-HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhh
Confidence 999999999985 445555555566666677888888877776654
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.1e-09 Score=118.64 Aligned_cols=225 Identities=10% Similarity=0.049 Sum_probs=128.9
Q ss_pred CCCEEEEecc-chHHHHHHHHhh-cCCEEEe----cc--------HHHHHHHHH-HHHHHhCc-eeecCCeEEEEcCeEE
Q psy2719 218 VVPVVWIHDY-QLLVAATTIRQV-AYDFVGF----HI--------EDYCLNFID-CCCRRLGS-RVDRNNMLVELAGRTV 281 (808)
Q Consensus 218 ~~dvvwihDy-hl~llp~~lr~~-~~dligf----~~--------~~~~~~fl~-~~~~~l~~-~~~~~~~~i~~~gr~~ 281 (808)
.+|+|++|.. ...+........ ..-++-. .+ .+..|+.+. .++.++.. +..++.+ ++.+....
T Consensus 86 ~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~~~~~~~~~~~r~~~~~~ad~~~~~s~~~~~~l-~~~G~~~~ 164 (365)
T TIGR00236 86 KPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGDRYSPMPEEINRQLTGHIADLHFAPTEQAKDNL-LRENVKAD 164 (365)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCCCCCCCccHHHHHHHHHHHHhccCCCHHHHHHH-HHcCCCcc
Confidence 3799999954 433433333322 2222211 11 122344443 34555542 2222222 23344566
Q ss_pred EEEEeecCc-CccccchhhcCchhhhhc--CCCeEEEE-EcCc-cccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCC
Q psy2719 282 HVKALPIGI-PFERFVQLAENAPENLKD--ENLKVILG-VDRL-DYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS 356 (808)
Q Consensus 282 ~v~v~p~GI-D~~~f~~~~~~~~~~~~~--~~~~iil~-V~Rl-~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~ 356 (808)
+|.++++|+ |...+.........++++ .++++++. ..|. ...||+..+++|+.++.+++|+++ +++++.|.
T Consensus 165 ~I~vign~~~d~~~~~~~~~~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~ 240 (365)
T TIGR00236 165 SIFVTGNTVIDALLTNVEIAYSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN 240 (365)
T ss_pred cEEEeCChHHHHHHHHHhhccchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC
Confidence 899999996 533221111111222222 23344554 4464 345999999999999988888763 55554432
Q ss_pred CCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCc
Q psy2719 357 RTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPG 436 (808)
Q Consensus 357 ~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g 436 (808)
. . .+.++ ...++. ...| .+.+.++..++..+|+.||+++.+| |.+.+|||+|++
T Consensus 241 ~---~----~~~~~---~~~~~~------~~~v-~~~~~~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~---- 294 (365)
T TIGR00236 241 P---V----VREPL---HKHLGD------SKRV-HLIEPLEYLDFLNLAANSHLILTDS-----GGVQEEAPSLGK---- 294 (365)
T ss_pred h---H----HHHHH---HHHhCC------CCCE-EEECCCChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCC----
Confidence 1 1 22222 222211 1134 4557889999999999999999988 556899999964
Q ss_pred eEEEc-CCCCCccccC--ceEEECCCCHHHHHHHHHHHhCC
Q psy2719 437 VLILS-PFAGAGGMMH--EALLVNPYEIDAAANVLHRALCM 474 (808)
Q Consensus 437 ~vVlS-~~~G~~~~l~--~~llvnP~d~~~lA~ai~~~L~~ 474 (808)
|+|++ +.+|..+.+. .++++ |.|+++++++|.++++.
T Consensus 295 PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~ 334 (365)
T TIGR00236 295 PVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTD 334 (365)
T ss_pred CEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhC
Confidence 57775 4444444442 36667 57999999999999974
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.5e-09 Score=118.19 Aligned_cols=181 Identities=16% Similarity=0.119 Sum_probs=114.9
Q ss_pred EEEeecCcCccccchhhcCchhhhhc-CCCeEEEEEcCccccCChHHH-HHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 283 VKALPIGIPFERFVQLAENAPENLKD-ENLKVILGVDRLDYTKGLVHR-IKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 283 v~v~p~GID~~~f~~~~~~~~~~~~~-~~~~iil~V~Rl~~~KGi~~~-l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
..++|+|+|...+.+.... .. ... ++.++|+++||....|++..+ ++|++++.+. ++ .++.+++ +.
T Consensus 152 ~~~i~n~v~~~~~~~~~~~-~~-~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~g----~~ 219 (348)
T TIGR01133 152 AVLVGNPVRQEIRSLPVPR-ER-FGLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQTG----KN 219 (348)
T ss_pred ceEEcCCcCHHHhcccchh-hh-cCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEECC----cc
Confidence 3688999997655432111 11 111 467789999999889997664 4788776543 22 2333332 11
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLIL 440 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVl 440 (808)
+ . +++++.+.+.+. ..++.+. . .++..+|+.||++|.+| | +.+++|||+|+. |+|+
T Consensus 220 ~-~----~~l~~~~~~~~l-------~~~v~~~---~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~----Pvv~ 275 (348)
T TIGR01133 220 D-L----EKVKNVYQELGI-------EAIVTFI---D-ENMAAAYAAADLVISRA---G-ASTVAELAAAGV----PAIL 275 (348)
T ss_pred h-H----HHHHHHHhhCCc-------eEEecCc---c-cCHHHHHHhCCEEEECC---C-hhHHHHHHHcCC----CEEE
Confidence 1 1 233444333221 1333332 2 27889999999999875 4 789999999964 5777
Q ss_pred cCCCCCc-------ccc---CceEEECCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHH
Q psy2719 441 SPFAGAG-------GMM---HEALLVNPYE--IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMN 500 (808)
Q Consensus 441 S~~~G~~-------~~l---~~~llvnP~d--~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~ 500 (808)
+...|.. +.+ ..|++++|.| +++++++|.++++. ++.++++.+++++++..+...+.++
T Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 276 IPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred eeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCccHHHHHHh
Confidence 7665432 234 2499999987 99999999999974 5556666666777776666555543
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >KOG3189|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.8e-09 Score=104.25 Aligned_cols=199 Identities=21% Similarity=0.290 Sum_probs=135.6
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
.+-|+.||.||||++. ...+++++.+.|++|+..
T Consensus 10 ~~~l~lfdvdgtLt~~-----r~~~~~e~~~~l~~lr~~----------------------------------------- 43 (252)
T KOG3189|consen 10 EETLCLFDVDGTLTPP-----RQKVTPEMLEFLQKLRKK----------------------------------------- 43 (252)
T ss_pred CceEEEEecCCccccc-----cccCCHHHHHHHHHHhhh-----------------------------------------
Confidence 4568999999999983 457899999999998765
Q ss_pred CeEEEEeCCChhhHHHhcCc----cceEEEcccceeEecCCCceeecC----CChh-HHHHHHHHHHHHHhhc--cCCCc
Q psy2719 622 VNIGIISGRTLENLMKMVNI----EKVTYAGSHGLEILHPDGTKFVHP----VPKE-YAEKLRQLIKALQDEV--CHDGA 690 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~~----~~~~li~~nG~~i~~~~~~~~~~~----~~~~-~~~~v~~i~~~~~~~~--~~~g~ 690 (808)
+.+.++-|.++..+.+.+|. .-++..+|||..-+..++..-.+. +..+ .++.+.-++.++.+-- ...|.
T Consensus 44 v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGt 123 (252)
T KOG3189|consen 44 VTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLVAYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGT 123 (252)
T ss_pred eEEEEeecHHHHHHHHHhchhHHhhhcccccCCCeeEeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 78899999998888888862 224677999988765543321121 1111 1222222344444321 24689
Q ss_pred EEEecCcEEEEE--cCcCChh-------------hHHHHHHHHHHHHHhcCeeE-EccCeEEEEeCCCCCCHHHHHHHHH
Q psy2719 691 WIENKGVLLTFH--YRETPIE-------------RREYIIDRASQIFLEAGFEP-HNALMAIEAKPPVKWDQGRASIHIL 754 (808)
Q Consensus 691 ~ie~k~~~~~~~--~~~~~~~-------------~~~~~~~~~~~~~~~~~~~v-~~g~~~vEv~p~~~v~KG~av~~ll 754 (808)
+||.++..+.+. -|++..+ +++.+.+++++.+..+++.. +.|.-++||-|. ||+|-..++++-
T Consensus 124 FiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~-GWDKtyCLqhle 202 (252)
T KOG3189|consen 124 FIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPK-GWDKTYCLQHLE 202 (252)
T ss_pred eEEecCCceeccccccccCHHHHHHHHHhhhhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCC-CcchhHHHHHhh
Confidence 999988776654 2444321 12334556666666678876 567889999998 999999999987
Q ss_pred HHhcCCCCCcceeEEEEe--------CHHHHHhccCCccEEEeCCCCccc
Q psy2719 755 RTMYGVDWSERVRIIYAG--------NEDAMLALQGIACTFRVDSSPTVK 796 (808)
Q Consensus 755 ~~~~~i~~~~~~~via~G--------D~~Mf~~~~~~~~~vav~~~~~vk 796 (808)
+. |++ .|.+|| |.+.|..-+.+| ..|.++++..
T Consensus 203 ~d--gf~-----~IhFFGDkT~~GGNDyEIf~dprtiG--hsV~~PdDT~ 243 (252)
T KOG3189|consen 203 KD--GFD-----TIHFFGDKTMPGGNDYEIFADPRTIG--HSVTSPDDTV 243 (252)
T ss_pred hc--CCc-----eEEEeccccCCCCCcceeeeCCcccc--ccccCchHHH
Confidence 64 554 789999 788887776555 6677765433
|
|
| >KOG1387|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.3e-09 Score=108.25 Aligned_cols=206 Identities=13% Similarity=0.172 Sum_probs=150.6
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCC--ccCcEEEEEEEcCCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPE--YVEKVTFLQISVPSRT 358 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~--~~~~v~lv~ig~~~~~ 358 (808)
..++++.+-.+++.+.....+ +..+...+|++|.+.|.|++. .|+-++..+++.|. ...++.|+++| ..|+
T Consensus 244 ~~~~iVyPPC~~e~lks~~~t-----e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRn 316 (465)
T KOG1387|consen 244 NTCSIVYPPCSTEDLKSKFGT-----EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRN 316 (465)
T ss_pred cceeEEcCCCCHHHHHHHhcc-----cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCC
Confidence 344444555666654433222 114567899999999999999 88888888888887 34568888777 4554
Q ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceE
Q psy2719 359 DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 359 ~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~v 438 (808)
+. ++ +....++.++.+++..- . +.|.-.+|.+++..+|..|-+.|-+-..|-||+.+.||||++ .+
T Consensus 317 ee-D~-ervk~Lkd~a~~L~i~~------~-v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAG-----lI 382 (465)
T KOG1387|consen 317 EE-DE-ERVKSLKDLAEELKIPK------H-VQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAG-----LI 382 (465)
T ss_pred hh-hH-HHHHHHHHHHHhcCCcc------c-eEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcC-----ce
Confidence 32 22 34456677777777541 2 445678999999999999999999999999999999999994 44
Q ss_pred EEcCCCCCc--cccC------ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 439 ILSPFAGAG--GMMH------EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 439 VlS~~~G~~--~~l~------~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
.++..+|.. +++. .|++. | +.++-|++|.+++.++.++|......+|..+.+++-....++|...+.++
T Consensus 383 pi~h~SgGP~lDIV~~~~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 383 PIVHNSGGPLLDIVTPWDGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred EEEeCCCCCceeeeeccCCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 444444432 3331 48887 3 56789999999999999988877777888888888788888887766654
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.6e-08 Score=109.64 Aligned_cols=167 Identities=12% Similarity=0.142 Sum_probs=109.6
Q ss_pred CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy2719 311 LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIR 390 (808)
Q Consensus 311 ~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~ 390 (808)
..++++.||+...||+..+++++ ++..|++ .++++++. +. ++++++++. .+.. ..+
T Consensus 203 ~~ilv~~G~lg~~k~~~~li~~~---~~~~~~~----~~vvv~G~---~~----~l~~~l~~~---~~~~------~~v- 258 (391)
T PRK13608 203 QTILMSAGAFGVSKGFDTMITDI---LAKSANA----QVVMICGK---SK----ELKRSLTAK---FKSN------ENV- 258 (391)
T ss_pred CEEEEECCCcccchhHHHHHHHH---HhcCCCc----eEEEEcCC---CH----HHHHHHHHH---hccC------CCe-
Confidence 34566799999999999999985 3444544 35555422 11 233333332 2111 134
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc------CceEEECCCCHHHH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM------HEALLVNPYEIDAA 464 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l------~~~llvnP~d~~~l 464 (808)
.+.|++ +++..+|++||+++.. +.|+++.|||||+. |+|++...+..+.. ..|.-+-+.|++++
T Consensus 259 ~~~G~~--~~~~~~~~~aDl~I~k----~gg~tl~EA~a~G~----PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~l 328 (391)
T PRK13608 259 LILGYT--KHMNEWMASSQLMITK----PGGITISEGLARCI----PMIFLNPAPGQELENALYFEEKGFGKIADTPEEA 328 (391)
T ss_pred EEEecc--chHHHHHHhhhEEEeC----CchHHHHHHHHhCC----CEEECCCCCCcchhHHHHHHhCCcEEEeCCHHHH
Confidence 355765 5799999999999863 46899999999964 57777543322221 12333336699999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHccccc
Q psy2719 465 ANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDND 512 (808)
Q Consensus 465 A~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 512 (808)
+++|.++++. ++.+.++.+++++....+++..-++.+++.+....+.
T Consensus 329 ~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~ 375 (391)
T PRK13608 329 IKIVASLTNG-NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQP 375 (391)
T ss_pred HHHHHHHhcC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhh
Confidence 9999999975 4555556666777777888888888888777655443
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.3e-09 Score=114.14 Aligned_cols=179 Identities=15% Similarity=0.140 Sum_probs=113.1
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHH-HHHHHHHHhCCCccCcEEEE-EEEcCCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRI-KAFERLLEKHPEYVEKVTFL-QISVPSR 357 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l-~A~~~ll~~~p~~~~~v~lv-~ig~~~~ 357 (808)
..++.++|+|+|.+.+.+... ........++++|+.+++....|+...++ +|++.+. + ++ +.++ ++|.
T Consensus 151 ~~~~~~i~n~v~~~~~~~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~-~-~~----~~~~~i~G~--- 220 (350)
T cd03785 151 KDKAVVTGNPVREEILALDRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL-R-KR----LQVIHQTGK--- 220 (350)
T ss_pred CCcEEEECCCCchHHhhhhhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh-c-cC----eEEEEEcCC---
Confidence 457888999999887754321 00110014677888999888888887654 7777664 2 22 3333 3332
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
+ +.+++++. +.+. + ..++ +.+.+ +++..+|+.||++|.+| | +.+++|||+|+. |
T Consensus 221 --g-~~~~l~~~----~~~~----~----~~v~-~~g~~--~~~~~~l~~ad~~v~~s---g-~~t~~Eam~~G~----P 274 (350)
T cd03785 221 --G-DLEEVKKA----YEEL----G----VNYE-VFPFI--DDMAAAYAAADLVISRA---G-ASTVAELAALGL----P 274 (350)
T ss_pred --c-cHHHHHHH----Hhcc----C----CCeE-Eeehh--hhHHHHHHhcCEEEECC---C-HhHHHHHHHhCC----C
Confidence 1 22334333 3222 1 1233 45555 78999999999999877 3 588999999964 4
Q ss_pred EEEcCCCCC--------cccc---CceEEECCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCH
Q psy2719 438 LILSPFAGA--------GGMM---HEALLVNPY--EIDAAANVLHRALCMPRDERELRMSQLRHREQQLDV 495 (808)
Q Consensus 438 vVlS~~~G~--------~~~l---~~~llvnP~--d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~ 495 (808)
+|++...+. ++.+ ..|++|++. |+++++++|..+++ +++.++....++++++..+..
T Consensus 275 vv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~ 344 (350)
T cd03785 275 AILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLS-DPERLKAMAEAARSLARPDAA 344 (350)
T ss_pred EEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHH
Confidence 676654331 2333 248999987 99999999999997 455555555556666554443
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.04 E-value=9.9e-10 Score=104.02 Aligned_cols=128 Identities=29% Similarity=0.424 Sum_probs=88.2
Q ss_pred CeEEEEEcCccccCChHHHHH-HHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy2719 311 LKVILGVDRLDYTKGLVHRIK-AFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPI 389 (808)
Q Consensus 311 ~~iil~V~Rl~~~KGi~~~l~-A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v 389 (808)
..+|++.|++.+.||+..+++ |++++.+++|++ .|+++|... + +++++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~----~l~i~G~~~-----~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDI----ELIIIGNGP-----D------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTE----EEEEECESS------------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCE----EEEEEeCCH-----H------HHHHh-cC----------CCE
Confidence 367999999999999999999 999999999875 477777522 1 12222 11 134
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCC-CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHH
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPL-RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAA 465 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~-~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA 465 (808)
. +.|.+ +++.++|+.||+++.|+. .++++..++|||++| .|+|+|.. |..+.+. .++++ +.|+++++
T Consensus 56 ~-~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G----~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~ 126 (135)
T PF13692_consen 56 R-FHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG----KPVIASDN-GAEGIVEEDGCGVLV-ANDPEELA 126 (135)
T ss_dssp E-EE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT------EEEEHH-HCHCHS---SEEEE--TT-HHHHH
T ss_pred E-EcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC----CCEEECCc-chhhheeecCCeEEE-CCCHHHHH
Confidence 4 45777 689999999999999984 789999999999995 56888887 5555552 47777 88999999
Q ss_pred HHHHHHhC
Q psy2719 466 NVLHRALC 473 (808)
Q Consensus 466 ~ai~~~L~ 473 (808)
++|.++++
T Consensus 127 ~~i~~l~~ 134 (135)
T PF13692_consen 127 EAIERLLN 134 (135)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999874
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.04 E-value=7.4e-09 Score=115.20 Aligned_cols=226 Identities=9% Similarity=0.039 Sum_probs=128.9
Q ss_pred CCEEEEeccchHHHHHHH-Hh-hcCCEEEec----c------HHHHHHHH-HHHHHHhC-ceeecCCeEEEEcCeEEEEE
Q psy2719 219 VPVVWIHDYQLLVAATTI-RQ-VAYDFVGFH----I------EDYCLNFI-DCCCRRLG-SRVDRNNMLVELAGRTVHVK 284 (808)
Q Consensus 219 ~dvvwihDyhl~llp~~l-r~-~~~dligf~----~------~~~~~~fl-~~~~~~l~-~~~~~~~~~i~~~gr~~~v~ 284 (808)
.|+|++|.+....++..+ .+ ..--++..+ + ....++.+ ..++.++. ++..++.+ +.++....+|.
T Consensus 89 pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~~~~~~~~~r~~~~~~ad~~~~~s~~~~~~l-~~~G~~~~kI~ 167 (363)
T cd03786 89 PDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFDRGMPDEENRHAIDKLSDLHFAPTEEARRNL-LQEGEPPERIF 167 (363)
T ss_pred CCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCCCCCCchHHHHHHHHHhhhccCCCHHHHHHH-HHcCCCcccEE
Confidence 799999987655454332 22 222233221 1 22233322 23333332 22222221 23444567788
Q ss_pred EeecCc-CccccchhhcCchhhhhc----CCCeEEEEEcCccc---cCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCC
Q psy2719 285 ALPIGI-PFERFVQLAENAPENLKD----ENLKVILGVDRLDY---TKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS 356 (808)
Q Consensus 285 v~p~GI-D~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~---~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~ 356 (808)
++++++ |...+.+........++. .+..+++.++|+.. .||+..+++|++.+.++ + +.++..+.+
T Consensus 168 vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~----~~vi~~~~~- 240 (363)
T cd03786 168 VVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--D----VPVVFPNHP- 240 (363)
T ss_pred EECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--C----CEEEEECCC-
Confidence 888875 654433221111111111 34457778999875 79999999999987543 2 334433321
Q ss_pred CCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCc
Q psy2719 357 RTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPG 436 (808)
Q Consensus 357 ~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g 436 (808)
+ .++++++.+.+.+.. -..+ .+.+....+++..+|+.||++|.+|- | +..|||+|+.
T Consensus 241 ----~----~~~~l~~~~~~~~~~-----~~~v-~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~---- 297 (363)
T cd03786 241 ----R----TRPRIREAGLEFLGH-----HPNV-LLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGV---- 297 (363)
T ss_pred ----C----hHHHHHHHHHhhccC-----CCCE-EEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCC----
Confidence 1 123334444333210 0134 45566778899999999999999994 4 4799999964
Q ss_pred eEEEcCCCCCcccc-CceEEECCC-CHHHHHHHHHHHhCCC
Q psy2719 437 VLILSPFAGAGGMM-HEALLVNPY-EIDAAANVLHRALCMP 475 (808)
Q Consensus 437 ~vVlS~~~G~~~~l-~~~llvnP~-d~~~lA~ai~~~L~~~ 475 (808)
|+|++...+...++ .+|+.+.+. |+++++++|.++++.+
T Consensus 298 PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 298 PVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDE 338 (363)
T ss_pred CEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCc
Confidence 57777655544444 456555443 7999999999999864
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.3e-07 Score=109.55 Aligned_cols=166 Identities=9% Similarity=0.115 Sum_probs=119.5
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCC-C-
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPN-W- 386 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~-~- 386 (808)
..+.|.+++||| +.|.+..+|+|+.++.+++|++. |.+.|.++. . ++.+.+++++.++|..++... +
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~~~---~---~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYNND---N---DITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEecCc---h---hHHHHHHHHHHHHHhhhchhhhcc
Confidence 345556666699 99999999999999999999864 665664321 1 234555666666655422100 0
Q ss_pred --------------------ccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCC
Q psy2719 387 --------------------SPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGA 446 (808)
Q Consensus 387 --------------------~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~ 446 (808)
...+.|.|..+..++.+.|..|.++|.+|..|||+ +.+|||+.|. |.| .-|.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~Gi----PqI---nyg~ 459 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGI----PQI---NKVE 459 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCC----Cee---ecCC
Confidence 02456778788889999999999999999999999 9999999843 344 5567
Q ss_pred ccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHH
Q psy2719 447 GGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVN 496 (808)
Q Consensus 447 ~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~ 496 (808)
++.+. +|++| .|..++++||...|..+ +...+......+.+.++|..
T Consensus 460 ~~~V~d~~NG~li--~d~~~l~~al~~~L~~~-~~wn~~~~~sy~~~~~yS~~ 509 (519)
T TIGR03713 460 TDYVEHNKNGYII--DDISELLKALDYYLDNL-KNWNYSLAYSIKLIDDYSSE 509 (519)
T ss_pred ceeeEcCCCcEEe--CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhHH
Confidence 77774 69999 79999999999999854 34444445555655555543
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.1e-07 Score=102.99 Aligned_cols=133 Identities=16% Similarity=0.188 Sum_probs=87.1
Q ss_pred CCeEE-EEE-cCccccC-ChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCC
Q psy2719 310 NLKVI-LGV-DRLDYTK-GLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNW 386 (808)
Q Consensus 310 ~~~ii-l~V-~Rl~~~K-Gi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~ 386 (808)
++++| +.. +|....| +++.+++|++.+.+++|++ .+++++.+ .+ .++++++++.+.. | .
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~----~~ii~~~~----~~----~~~~~~~~~~~~~---~---~ 246 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDL----RFVLPLVN----PK----RREQIEEALAEYA---G---L 246 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecCC----hh----hHHHHHHHHhhcC---C---C
Confidence 44543 333 4666654 4789999999998888865 35655421 11 2233444433320 1 1
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEc-----------------CCCCCccc
Q psy2719 387 SPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILS-----------------PFAGAGGM 449 (808)
Q Consensus 387 ~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS-----------------~~~G~~~~ 449 (808)
.+.++. .++..+|+.||+++.+| |.+.+|+|+|++ |+|++ .+.|..+.
T Consensus 247 -~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~----PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 247 -EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV----PMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred -CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC----CEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 233332 47899999999999998 788899999964 56666 33344444
Q ss_pred cC-----ceEEECCCCHHHHHHHHHHHhCCC
Q psy2719 450 MH-----EALLVNPYEIDAAANVLHRALCMP 475 (808)
Q Consensus 450 l~-----~~llvnP~d~~~lA~ai~~~L~~~ 475 (808)
+. .+++.+..|+++++++|.++|+.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLPLLADG 342 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHHHhcCH
Confidence 43 246778889999999999999853
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.1e-08 Score=99.50 Aligned_cols=112 Identities=26% Similarity=0.378 Sum_probs=81.0
Q ss_pred EEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcC
Q psy2719 315 LGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFG 394 (808)
Q Consensus 315 l~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~ 394 (808)
.++||+.+.||++.+++|+..+.++.|++ .++++|... +... .+ .++... +. ...|.+ .+
T Consensus 108 ~~~g~~~~~k~~~~~~~a~~~l~~~~~~~----~~~i~G~~~--~~~~---~~----~~~~~~----~~--~~~v~~-~~ 167 (229)
T cd01635 108 VFVGRLAPEKGLDDLIEAFALLKERGPDL----KLVIAGDGP--EREY---LE----ELLAAL----LL--LDRVIF-LG 167 (229)
T ss_pred EEEEeecccCCHHHHHHHHHHHHHhCCCe----EEEEEeCCC--ChHH---HH----HHHHhc----CC--cccEEE-eC
Confidence 39999999999999999999998887765 588777532 1111 11 111111 11 124544 45
Q ss_pred CC-CHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc
Q psy2719 395 CI-GQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM 450 (808)
Q Consensus 395 ~v-~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l 450 (808)
.+ +.+++..+++.||+++.||..||||++++|||+|+ .|+|+|+..+..+.+
T Consensus 168 ~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g----~pvi~s~~~~~~e~i 220 (229)
T cd01635 168 GLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG----LPVIATDVGGPPEIV 220 (229)
T ss_pred CCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC----CCEEEcCCCCcceEE
Confidence 55 55666777777999999999999999999999995 569999988877655
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.2e-08 Score=97.71 Aligned_cols=175 Identities=19% Similarity=0.330 Sum_probs=107.8
Q ss_pred HHHHHHHhCCCCCeEEEEeCCChhhHHHhc-Cc----cceEEEcccceeEecCCCceeecCCC----hh-HHHHHHHHHH
Q psy2719 610 KRVLERLANMPDVNIGIISGRTLENLMKMV-NI----EKVTYAGSHGLEILHPDGTKFVHPVP----KE-YAEKLRQLIK 679 (808)
Q Consensus 610 ~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~-~~----~~~~li~~nG~~i~~~~~~~~~~~~~----~~-~~~~v~~i~~ 679 (808)
++.|++|.. .+.|+|+||.++..+.+.+ +. ...++.++||...+..++..+.+.+. .+ .++.+.-++.
T Consensus 2 ~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l~ 79 (220)
T PF03332_consen 2 AELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCLR 79 (220)
T ss_dssp HHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHHH
Confidence 345556655 7999999999999988877 32 12478899999998776555544332 11 1222333333
Q ss_pred HHHhhc--cCCCcEEEecCcEEEEEc--CcCChhhH-------------HHHHHHHHHHHHhcCeeE-EccCeEEEEeCC
Q psy2719 680 ALQDEV--CHDGAWIENKGVLLTFHY--RETPIERR-------------EYIIDRASQIFLEAGFEP-HNALMAIEAKPP 741 (808)
Q Consensus 680 ~~~~~~--~~~g~~ie~k~~~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~v-~~g~~~vEv~p~ 741 (808)
+..+.- ...|.+||.+...+.+.- |+++.+.. +.+.+.+++.+..+++++ +-|..++||.|+
T Consensus 80 ~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp~ 159 (220)
T PF03332_consen 80 YISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFPK 159 (220)
T ss_dssp HHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEET
T ss_pred HHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEccccC
Confidence 333321 246899999999998864 44543211 112233333333446777 467899999998
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCcceeEEEEe--------CHHHHHhccCCccEEEeCCCCccc
Q psy2719 742 VKWDQGRASIHILRTMYGVDWSERVRIIYAG--------NEDAMLALQGIACTFRVDSSPTVK 796 (808)
Q Consensus 742 ~~v~KG~av~~ll~~~~~i~~~~~~~via~G--------D~~Mf~~~~~~~~~vav~~~~~vk 796 (808)
|++|..++++|.+. +++ ++++|| |.+.|...+.+| ++|.++++.+
T Consensus 160 -GwDKty~Lr~l~~~--~~~-----~I~FfGDkt~pGGNDyei~~~~rt~g--~~V~~p~DT~ 212 (220)
T PF03332_consen 160 -GWDKTYCLRHLEDE--GFD-----EIHFFGDKTFPGGNDYEIFEDPRTIG--HTVTSPEDTI 212 (220)
T ss_dssp -T-SGGGGGGGTTTT--T-S-----EEEEEESS-STTSTTHHHHHSTTSEE--EE-SSHHHHH
T ss_pred -CccHHHHHHHHHhc--ccc-----eEEEEehhccCCCCCceeeecCCccE--EEeCCHHHHH
Confidence 99999999998663 222 799999 999999876444 8898865433
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=9.7e-06 Score=89.44 Aligned_cols=91 Identities=13% Similarity=0.131 Sum_probs=65.0
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCC-----------CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEE
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPL-----------RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALL 455 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~-----------~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~ll 455 (808)
+.+.|.++.++++.+|+. |+.+++.- .-.++--..|||||| .|+|++..++.++.+. .|++
T Consensus 209 V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G----~PVI~~~~~~~~~~V~~~~~G~~ 283 (333)
T PRK09814 209 ISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG----LPVIVWSKAAIADFIVENGLGFV 283 (333)
T ss_pred eEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC----CCEEECCCccHHHHHHhCCceEE
Confidence 345799999999999998 65555331 123445588999996 5699999888888874 4999
Q ss_pred ECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH
Q psy2719 456 VNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE 490 (808)
Q Consensus 456 vnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v 490 (808)
|+ +.++++++|..+ ++++++++.++.++..
T Consensus 284 v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~ 313 (333)
T PRK09814 284 VD--SLEELPEIIDNI---TEEEYQEMVENVKKIS 313 (333)
T ss_pred eC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHH
Confidence 97 678999999874 3555555444444443
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.5e-05 Score=90.90 Aligned_cols=114 Identities=11% Similarity=0.157 Sum_probs=68.5
Q ss_pred cEEEEcCCCCHH------HHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----C----ce
Q psy2719 388 PIRYIFGCIGQE------ELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----H----EA 453 (808)
Q Consensus 388 ~v~~~~~~v~~~------el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~----~~ 453 (808)
.|+|...+++.. ++..+.+.+|+.|+||.||++|.+++|+.|.+ .|.|.|+.+|....+ . .|
T Consensus 444 KVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~g----VPsITTnLsGFG~~~~~~~~~~~~~G 519 (633)
T PF05693_consen 444 KVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFG----VPSITTNLSGFGCWMQEHIEDPEEYG 519 (633)
T ss_dssp EEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT------EEEETTBHHHHHHHTTS-HHGGGT
T ss_pred EEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcC----CceeeccchhHHHHHHHhhccCcCCc
Confidence 455554444332 47788999999999999999999999999995 579999999975333 1 35
Q ss_pred EE-ECCC--C----HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHH
Q psy2719 454 LL-VNPY--E----IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSS 505 (808)
Q Consensus 454 ll-vnP~--d----~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 505 (808)
+. |+=. + ++++|+.|.+...++.++|.....+..+....-+|..-...|.+.
T Consensus 520 V~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~A 578 (633)
T PF05693_consen 520 VYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKA 578 (633)
T ss_dssp EEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 54 4332 3 356777778888888777666555444444455666655555443
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.7e-06 Score=84.41 Aligned_cols=72 Identities=14% Similarity=0.075 Sum_probs=53.7
Q ss_pred EEEEecccccccCCCC------CCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhC
Q psy2719 545 SLILDYDGTLTPLTSH------PDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLAN 618 (808)
Q Consensus 545 li~~D~DGTLl~~~~~------~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~ 618 (808)
++++|+||||+..... .....+++.+.+++++++++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~-------------------------------------- 42 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN-------------------------------------- 42 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc--------------------------------------
Confidence 4899999999984210 00147889999999999987
Q ss_pred CCCCeEEEEeCCChhhHH---HhcC--------ccceEEEcccceeEec
Q psy2719 619 MPDVNIGIISGRTLENLM---KMVN--------IEKVTYAGSHGLEILH 656 (808)
Q Consensus 619 ~pg~~v~I~SGR~~~~l~---~~~~--------~~~~~li~~nG~~i~~ 656 (808)
|+.|+++|||+..... +++. .+..++++.||+.+..
T Consensus 43 --G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~ 89 (157)
T smart00775 43 --GYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAA 89 (157)
T ss_pred --CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhh
Confidence 9999999999977653 4442 3334788999998864
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.29 E-value=4e-06 Score=74.00 Aligned_cols=87 Identities=22% Similarity=0.231 Sum_probs=70.2
Q ss_pred eEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q psy2719 410 IALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQL 486 (808)
Q Consensus 410 v~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~ 486 (808)
|++.|+..+|+++..+|+|||| +|+|.+...+..+.+. +++.++ |+++++++|..+++. ++++++..+++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G----~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~-~~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACG----TPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLEN-PEERRRIAKNA 73 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCC----CeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCC-HHHHHHHHHHH
Confidence 4677888999999999999994 5666666667777774 377777 999999999999984 56777777778
Q ss_pred hHHHh-cCCHHHHHHHHH
Q psy2719 487 RHREQ-QLDVNHWMNSFL 503 (808)
Q Consensus 487 ~~~v~-~~~~~~W~~~~l 503 (808)
++++. .||+.+-++.|+
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 88886 788888887776
|
|
| >KOG1050|consensus | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.2e-07 Score=109.80 Aligned_cols=89 Identities=30% Similarity=0.652 Sum_probs=68.8
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||+++|++..++.+-.||||.|...+. ... .......+..+++.|++++++...+||+||||++|||+||
T Consensus 31 ~~~l~~~l~~~~~~~~~~~vg~~~~~~~~-------~~~-~~~~~~~~~~~~~~pv~~~~~~~~~~y~~~~~~ilwP~~h 102 (732)
T KOG1050|consen 31 PGSLVSQLKGIFREMEVKWVGPLGDELDD-------SEK-EDVSQELLEEFDSVPVFLDDELFDSYYNGYCKSILWPLFH 102 (732)
T ss_pred CCCchhhhhcccccceeeEEeeccccCch-------hhH-hHhhhhhhhhcCceeeecCCchhhhhhhhhhhhcccceee
Confidence 58999999999999999999998844321 111 1112234567899999999999999999999999999999
Q ss_pred cC--cccc---ccCcccchhhh
Q psy2719 81 SM--PDRA---VFNAETWKVSH 97 (808)
Q Consensus 81 ~~--~~~~---~~~~~~w~~y~ 97 (808)
|+ |... +|+.+.|..|+
T Consensus 103 y~~~p~~~~~~~~~~~~w~~y~ 124 (732)
T KOG1050|consen 103 YMLIPSEPAFKLFDLELWKAYV 124 (732)
T ss_pred cccCCCchhhhhhHHHHHHHHH
Confidence 99 3322 45578899886
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=98.24 E-value=7e-05 Score=88.20 Aligned_cols=148 Identities=17% Similarity=0.136 Sum_probs=107.2
Q ss_pred CCeEEEEEcCccccCChHHHHHHHHHHHH--hCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy2719 310 NLKVILGVDRLDYTKGLVHRIKAFERLLE--KHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWS 387 (808)
Q Consensus 310 ~~~iil~V~Rl~~~KGi~~~l~A~~~ll~--~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~ 387 (808)
+.++|.+|.|+...||++.++.+++++++ ++|+. .+.+|+.|.+...+... .++.+.+.+++..- .|. .
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~g-k~~i~~i~~la~~~--~~~----~ 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGEG-KEIIQRIVEFSKRP--EFR----G 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccchH-HHHHHHHHHHHhcc--cCC----C
Confidence 45689999999999999999999999985 55552 47788888665443221 23445555554320 021 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhcCeEEE-CCC-CCCCChhHHHHHHhccCCCceEEEcCCCCCcccc---CceEEECC----
Q psy2719 388 PIRYIFGCIGQEELAALYRDSAIALV-TPL-RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM---HEALLVNP---- 458 (808)
Q Consensus 388 ~v~~~~~~v~~~el~aly~~Adv~v~-~S~-~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l---~~~llvnP---- 458 (808)
.|+++.++ +..--..++++||+++. ||. +|.-|+.-+=||.- |.+-.|-.-|...+. .+|+.+.+
T Consensus 459 kv~f~~~Y-d~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n-----GgL~~sv~DG~~~E~~~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 459 RIVFLENY-DINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN-----GVLNLSILDGWWGEGYDGDNGWAIGDGEEY 532 (601)
T ss_pred CEEEEcCC-CHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc-----CCceeecccCcccccCCCCcEEEECCCccc
Confidence 46666543 44444568999999999 888 99999999999885 667778777876665 36999985
Q ss_pred --------CCHHHHHHHHHHHh
Q psy2719 459 --------YEIDAAANVLHRAL 472 (808)
Q Consensus 459 --------~d~~~lA~ai~~~L 472 (808)
.|.+++-++|.+++
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai 554 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEV 554 (601)
T ss_pred cccccccCCCHHHHHHHHHHHH
Confidence 89999999998877
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=5.1e-07 Score=98.37 Aligned_cols=57 Identities=11% Similarity=0.169 Sum_probs=48.8
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccCcC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~~ 806 (808)
+-.|+.+++.++++ +|++.+ ++++|| |++|++.+| . +|||.+.+.||+.|++++.++
T Consensus 246 ~k~K~~~L~~la~~-lgi~~~---qtIaVGDg~NDl~m~~~AG-l--giA~nAkp~Vk~~Ad~~i~~~ 306 (322)
T PRK11133 246 AQYKADTLTRLAQE-YEIPLA---QTVAIGDGANDLPMIKAAG-L--GIAYHAKPKVNEQAQVTIRHA 306 (322)
T ss_pred cccHHHHHHHHHHH-cCCChh---hEEEEECCHHHHHHHHHCC-C--eEEeCCCHHHHhhCCEEecCc
Confidence 35899999999987 899875 799999 999999995 4 488865799999999999763
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.00014 Score=82.01 Aligned_cols=135 Identities=15% Similarity=0.072 Sum_probs=82.5
Q ss_pred CCCeEEEE--EcCccc-cCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCC
Q psy2719 309 ENLKVILG--VDRLDY-TKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPN 385 (808)
Q Consensus 309 ~~~~iil~--V~Rl~~-~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~ 385 (808)
.++++|+. .+|..+ .|+++.+++|++.+.+++|+++ +++.+.+. .. ++.++++....+. +
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~----~~~~~~~~~~~~~-----~ 251 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KR----RLQFEQIKAEYGP-----D 251 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hh----HHHHHHHHHHhCC-----C
Confidence 35565544 459887 7999999999999998888763 44333221 11 1222333322221 1
Q ss_pred CccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcC-----------------CCCCcc
Q psy2719 386 WSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSP-----------------FAGAGG 448 (808)
Q Consensus 386 ~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~-----------------~~G~~~ 448 (808)
..+..+.+ +...+|++||++|.+| |.+.+|+|+|++| +|++- +.+.+.
T Consensus 252 -~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P----~Vv~yk~~pl~~~~~~~~~~~~~~~~~n 316 (385)
T TIGR00215 252 -LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKTP----MVVGYRMKPLTFLIARRLVKTDYISLPN 316 (385)
T ss_pred -CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCCC----EEEEEcCCHHHHHHHHHHHcCCeeeccH
Confidence 13444432 3457999999999999 7788899999764 55541 122222
Q ss_pred ccCc-e----EEECCCCHHHHHHHHHHHhCCC
Q psy2719 449 MMHE-A----LLVNPYEIDAAANVLHRALCMP 475 (808)
Q Consensus 449 ~l~~-~----llvnP~d~~~lA~ai~~~L~~~ 475 (808)
.+.+ + ++-+-.+++.+++++.++|+.+
T Consensus 317 il~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 317 ILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 2211 1 2223346889999999999865
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.7e-06 Score=81.21 Aligned_cols=56 Identities=14% Similarity=0.085 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcCC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHTM 807 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~~ 807 (808)
+|..+++.++++ +|++++ .++++| |++|++.++ ++++|.+ .+.++..|+|++.++.
T Consensus 76 ~k~~~~~~~~~~-~~~~~~---~~~~vGDs~~D~~~~~~ag---~~~~v~~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 76 NKLIAFSDILEK-LALAPE---NVAYIGDDLIDWPVMEKVG---LSVAVADAHPLLIPRADYVTRIAG 136 (154)
T ss_pred chHHHHHHHHHH-cCCCHH---HEEEECCCHHHHHHHHHCC---CeEecCCcCHHHHHhCCEEecCCC
Confidence 588899999987 888865 799999 999999995 4599986 5789999999998763
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.14 E-value=5.3e-05 Score=86.03 Aligned_cols=122 Identities=12% Similarity=0.240 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHH
Q psy2719 327 VHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYR 406 (808)
Q Consensus 327 ~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~ 406 (808)
...|+|++.+.++.|++. |=+ |.++ + +..+|.++ .+ | ..++.+.+.. ..++..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y-----~nvvly~~~~-~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----Y-----DNVKLYPNIT-TQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----c-----CCcEEECCcC-hHHHHHHHH
Confidence 899999999999999975 443 4333 1 22344444 22 2 2566666554 467889999
Q ss_pred hcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCC-CCccccCceEEECCCCHHHHHHHHHHHhCCCH
Q psy2719 407 DSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFA-GAGGMMHEALLVNPYEIDAAANVLHRALCMPR 476 (808)
Q Consensus 407 ~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~-G~~~~l~~~llvnP~d~~~lA~ai~~~L~~~~ 476 (808)
.||+++.+|..|||++++.||+..+. |++.=+.+ |-.+.+.+|.++++.|+++|+++|.++|+.+.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~G~----pI~afd~t~~~~~~i~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEYNL----LILGFEETAHNRDFIASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHcCC----cEEEEecccCCcccccCCceecCCCHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999843 34443333 44555567999999999999999999998653
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=7.7e-06 Score=82.13 Aligned_cols=54 Identities=13% Similarity=0.114 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
+|..+++.++++ +|++++ +++++| |++|++.++ ++++|++ .+.++..|+|++..
T Consensus 96 ~k~~~l~~~~~~-~gl~~~---ev~~VGDs~~D~~~a~~aG---~~~~v~~~~~~~~~~a~~v~~~ 154 (183)
T PRK09484 96 NKLIAFSDLLEK-LAIAPE---QVAYIGDDLIDWPVMEKVG---LSVAVADAHPLLLPRADYVTRI 154 (183)
T ss_pred cHHHHHHHHHHH-hCCCHH---HEEEECCCHHHHHHHHHCC---CeEecCChhHHHHHhCCEEecC
Confidence 577899999997 898865 799999 999999984 4477876 46668889998864
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.9e-05 Score=77.98 Aligned_cols=55 Identities=13% Similarity=0.165 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
.|-..++.++++ ++++++ ++++|| |++|++.++ ++++|+| .+.+|+.|+|++.++
T Consensus 82 pkp~~~~~~~~~-l~~~~~---ev~~iGD~~nDi~~~~~ag---~~~am~nA~~~lk~~A~~I~~~~ 141 (169)
T TIGR02726 82 KKTEPYAQMLEE-MNISDA---EVCYVGDDLVDLSMMKRVG---LAVAVGDAVADVKEAAAYVTTAR 141 (169)
T ss_pred CCHHHHHHHHHH-cCcCHH---HEEEECCCHHHHHHHHHCC---CeEECcCchHHHHHhCCEEcCCC
Confidence 355688888886 788764 799999 999999984 5699997 589999999998743
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.85 E-value=2.6e-05 Score=72.74 Aligned_cols=37 Identities=16% Similarity=0.127 Sum_probs=27.2
Q ss_pred eEEEEecccccccCCCCC-CccCCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTSHP-DLAVMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~-~~~~i~~~~~~~L~~L~~~ 580 (808)
++|++|+||||+.....+ ....+.++++++|+++.++
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~ 39 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKAL 39 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHC
Confidence 479999999998743211 1235778999999998877
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.82 E-value=6.7e-05 Score=70.07 Aligned_cols=56 Identities=14% Similarity=0.341 Sum_probs=42.5
Q ss_pred EEEEecccccccCCCCC---CccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 545 SLILDYDGTLTPLTSHP---DLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~---~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
+++||+||||.+..... ....+.+.+.+.|++|+++ |
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----------------------------------------g 40 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK----------------------------------------G 40 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC----------------------------------------C
Confidence 47999999999854310 1125677888888888876 8
Q ss_pred CeEEEEeCCChhhHHHhcC
Q psy2719 622 VNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~ 640 (808)
+.++|+||+....+..++.
T Consensus 41 ~~i~ivS~~~~~~~~~~~~ 59 (139)
T cd01427 41 IKLALATNKSRREVLELLE 59 (139)
T ss_pred CeEEEEeCchHHHHHHHHH
Confidence 9999999998877777664
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0017 Score=78.29 Aligned_cols=132 Identities=20% Similarity=0.141 Sum_probs=93.6
Q ss_pred eEEEEEcCccccCChHHHHHHHHHHHH--hCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy2719 312 KVILGVDRLDYTKGLVHRIKAFERLLE--KHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPI 389 (808)
Q Consensus 312 ~iil~V~Rl~~~KGi~~~l~A~~~ll~--~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v 389 (808)
.+|.++.|+...||...+++.++++.+ .+|+ ..+.+|+.|.+...+... +++.+.+.++...- +|. ..|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~g-K~iIk~i~~~a~~p--~~~----~kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEPG-KELIQEIVEFSRRP--EFR----GRI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchHH-HHHHHHHHHHHhCc--CCC----CcE
Confidence 479999999999999999999998865 3444 257788888655443221 23444444444310 221 146
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCC--CCCCChhHHHHHHhccCCCceEEEcCCCCCcccc---CceEEECC
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPL--RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM---HEALLVNP 458 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~--~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l---~~~llvnP 458 (808)
+|+.++ +-.--..+++.|||++.||. +|.=|+.-+=||.- |++-+|..-|...+. .+|..+.+
T Consensus 550 vfle~Y-d~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N-----G~LnlSvlDGww~E~~~g~nGwaig~ 617 (778)
T cd04299 550 VFLEDY-DMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN-----GGLNLSVLDGWWDEGYDGENGWAIGD 617 (778)
T ss_pred EEEcCC-CHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc-----CCeeeecccCccccccCCCCceEeCC
Confidence 666543 44444568999999999999 99999999888874 788889988887666 25999988
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.66 E-value=8.9e-05 Score=78.24 Aligned_cols=71 Identities=13% Similarity=0.120 Sum_probs=52.4
Q ss_pred ceEEEEecccccccCCCCCCccCC-CHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVM-SEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i-~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
.++|+||+||||++... ..+| +|.+.++|++|+++ |
T Consensus 126 ~kvIvFDLDgTLi~~~~---~v~irdPgV~EaL~~Lkek----------------------------------------G 162 (301)
T TIGR01684 126 PHVVVFDLDSTLITDEE---PVRIRDPRIYDSLTELKKR----------------------------------------G 162 (301)
T ss_pred ceEEEEecCCCCcCCCC---ccccCCHHHHHHHHHHHHC----------------------------------------C
Confidence 46999999999999422 1224 59999999999998 9
Q ss_pred CeEEEEeCCChhhHHHhc---Cccc-eEEEcccceeEec
Q psy2719 622 VNIGIISGRTLENLMKMV---NIEK-VTYAGSHGLEILH 656 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~---~~~~-~~li~~nG~~i~~ 656 (808)
+.++|+|+++...+...+ |+.. ...|..+|.....
T Consensus 163 ikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~ 201 (301)
T TIGR01684 163 CILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEE 201 (301)
T ss_pred CEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccC
Confidence 999999988887765554 4433 2356667776543
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00084 Score=68.96 Aligned_cols=55 Identities=11% Similarity=0.125 Sum_probs=45.6
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSN 804 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~ 804 (808)
+-+|..+++.+++. +|++++ +++|+| |.+||+.++ .+ +++...+.+++.|+....
T Consensus 142 ~~~K~~~l~~~~~~-~g~~~~---~~~a~gDs~nDlpml~~ag-~~--ia~n~~~~l~~~a~~~~~ 200 (212)
T COG0560 142 GEGKAKALRELAAE-LGIPLE---ETVAYGDSANDLPMLEAAG-LP--IAVNPKPKLRALADVRIW 200 (212)
T ss_pred cchHHHHHHHHHHH-cCCCHH---HeEEEcCchhhHHHHHhCC-CC--eEeCcCHHHHHHHHHhcC
Confidence 46899999999986 899875 799999 999999995 44 888877778888876543
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00052 Score=72.59 Aligned_cols=68 Identities=15% Similarity=0.105 Sum_probs=48.9
Q ss_pred ceEEEEecccccccCCCCCCccCC---CHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVM---SEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANM 619 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i---~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~ 619 (808)
.++|+||+||||++.. ..+ +|.+.++|.+|++.
T Consensus 128 ~~~i~~D~D~TL~~~~-----~~v~irdp~V~EtL~eLkek--------------------------------------- 163 (303)
T PHA03398 128 PHVIVFDLDSTLITDE-----EPVRIRDPFVYDSLDELKER--------------------------------------- 163 (303)
T ss_pred ccEEEEecCCCccCCC-----CccccCChhHHHHHHHHHHC---------------------------------------
Confidence 4699999999999942 344 68999999999988
Q ss_pred CCCeEEEEeCCChhhHHHhc---Cccc-eEEEcccceeEe
Q psy2719 620 PDVNIGIISGRTLENLMKMV---NIEK-VTYAGSHGLEIL 655 (808)
Q Consensus 620 pg~~v~I~SGR~~~~l~~~~---~~~~-~~li~~nG~~i~ 655 (808)
|+.++|+|+.+...+...+ ++.. ...+..+|....
T Consensus 164 -GikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~ 202 (303)
T PHA03398 164 -GCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAG 202 (303)
T ss_pred -CCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCccc
Confidence 8999999977666555544 4432 224555665543
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.2 Score=55.68 Aligned_cols=159 Identities=19% Similarity=0.112 Sum_probs=99.3
Q ss_pred CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCC----
Q psy2719 311 LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNW---- 386 (808)
Q Consensus 311 ~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~---- 386 (808)
+++++..+. ...--...++++..+++++|+. ++++. | ..|| --..+++++.+.+-+++.-..
T Consensus 231 r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~-----llIlV-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~ 296 (419)
T COG1519 231 RPVWVAAST--HEGEEEIILDAHQALKKQFPNL-----LLILV-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPP 296 (419)
T ss_pred CceEEEecC--CCchHHHHHHHHHHHHhhCCCc-----eEEEe-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCC
Confidence 888888888 3333344789999999999986 33333 3 1232 245667777777766532211
Q ss_pred ---ccEEEEcCCCCHHHHHHHHHhcCeEEECC-CCCCCChhHHHHHHhccCCCceEEEcCCC----CCccccC---ceEE
Q psy2719 387 ---SPIRYIFGCIGQEELAALYRDSAIALVTP-LRDGMNLVAKEYVACQIREPGVLILSPFA----GAGGMMH---EALL 455 (808)
Q Consensus 387 ---~~v~~~~~~v~~~el~aly~~Adv~v~~S-~~EG~gLv~~Eama~~~~~~g~vVlS~~~----G~~~~l~---~~ll 455 (808)
++|... . +.-|+..+|+.||++.+-- +-+==|=-++|+.+++ .|+|...+. -+++.+. +++.
T Consensus 297 ~~~tdV~l~--D-tmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~----~pvi~Gp~~~Nf~ei~~~l~~~ga~~~ 369 (419)
T COG1519 297 FSDTDVLLG--D-TMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFG----TPVIFGPYTFNFSDIAERLLQAGAGLQ 369 (419)
T ss_pred CCCCcEEEE--e-cHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcC----CCEEeCCccccHHHHHHHHHhcCCeEE
Confidence 233322 1 5579999999999977654 3321233479999995 456654433 2333332 3677
Q ss_pred ECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcC
Q psy2719 456 VNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQL 493 (808)
Q Consensus 456 vnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~ 493 (808)
|+. .+.+++++..+++. +++|.++.++....+..+
T Consensus 370 v~~--~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 370 VED--ADLLAKAVELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred ECC--HHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 764 77888888887764 666666666666666544
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0014 Score=69.15 Aligned_cols=31 Identities=19% Similarity=0.302 Sum_probs=25.1
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
++|+||+||||++. ...++ .+.++|++|+++
T Consensus 2 ~~~~~D~DGtl~~~-----~~~i~-~a~~~l~~l~~~ 32 (249)
T TIGR01457 2 KGYLIDLDGTMYKG-----KERIP-EAETFVHELQKR 32 (249)
T ss_pred CEEEEeCCCceEcC-----CeeCc-CHHHHHHHHHHC
Confidence 47999999999983 23444 789999999987
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.005 Score=57.97 Aligned_cols=37 Identities=22% Similarity=0.210 Sum_probs=24.9
Q ss_pred eEEEEecccccccCCC--CCCcc-----CCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTS--HPDLA-----VMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~--~~~~~-----~i~~~~~~~L~~L~~~ 580 (808)
|+|++|+||||++... ..... .+.+.+.+.|+.|+++
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~ 44 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN 44 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC
Confidence 5899999999998521 00000 2456788888888776
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0033 Score=66.69 Aligned_cols=46 Identities=20% Similarity=0.330 Sum_probs=31.0
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccc
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRT 592 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~ 592 (808)
++|+||+||||++.... ...+.+.+.++|++|+++ +..++++|||+
T Consensus 2 k~i~~D~DGtl~~~~~~--~~~~~~~a~~al~~l~~~-G~~~~~~Tn~~ 47 (257)
T TIGR01458 2 KGVLLDISGVLYISDAK--SGVAVPGSQEAVKRLRGA-SVKVRFVTNTT 47 (257)
T ss_pred CEEEEeCCCeEEeCCCc--ccCcCCCHHHHHHHHHHC-CCeEEEEECCC
Confidence 57999999999973210 012677999999999987 33334444333
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0038 Score=58.83 Aligned_cols=37 Identities=30% Similarity=0.371 Sum_probs=26.3
Q ss_pred eEEEEecccccccCCCC---CCccCCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTSH---PDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~---~~~~~i~~~~~~~L~~L~~~ 580 (808)
|+++||+||||++.... -....+.+.+.++|++|++.
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~ 40 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA 40 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC
Confidence 57999999999952111 01235678888899999877
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.006 Score=64.30 Aligned_cols=42 Identities=19% Similarity=0.282 Sum_probs=31.3
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccc
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRT 592 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~ 592 (808)
++++||+||||+.. ..+.+.+.++|++|++. +..+.++|+|+
T Consensus 2 ~~v~~DlDGtL~~~------~~~~p~a~~~l~~L~~~-g~~~~~~Tn~~ 43 (248)
T PRK10444 2 KNVICDIDGVLMHD------NVAVPGAAEFLHRILDK-GLPLVLLTNYP 43 (248)
T ss_pred cEEEEeCCCceEeC------CeeCccHHHHHHHHHHC-CCeEEEEeCCC
Confidence 47999999999983 25678899999999987 34444444444
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.015 Score=57.34 Aligned_cols=38 Identities=24% Similarity=0.177 Sum_probs=25.9
Q ss_pred ceEEEEecccccccCCCC------CCccC-CCHHHHHHHHHHhcC
Q psy2719 543 KLSLILDYDGTLTPLTSH------PDLAV-MSEETKRVLERLANM 580 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~------~~~~~-i~~~~~~~L~~L~~~ 580 (808)
.++++||+||||+...+. |++-+ +-+.+.++|++|.++
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~ 57 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE 57 (166)
T ss_pred CcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC
Confidence 468999999999974321 11111 337788899999887
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.0087 Score=65.37 Aligned_cols=52 Identities=17% Similarity=0.308 Sum_probs=34.7
Q ss_pred hhhHHHHhhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccc
Q psy2719 528 DDFDLYLNNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRT 592 (808)
Q Consensus 528 ~~~~~~~~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~ 592 (808)
..+..++..| ++|+||+||||+... .+.+.+.++|++|+++ +..++++|+|+
T Consensus 19 ~~~~~~~~~~------~~~~~D~DGtl~~~~------~~~~ga~e~l~~lr~~-g~~~~~~TN~~ 70 (311)
T PLN02645 19 ENADELIDSV------ETFIFDCDGVIWKGD------KLIEGVPETLDMLRSM-GKKLVFVTNNS 70 (311)
T ss_pred HHHHHHHHhC------CEEEEeCcCCeEeCC------ccCcCHHHHHHHHHHC-CCEEEEEeCCC
Confidence 3445555543 589999999999832 3457789999999887 33344444444
|
|
| >KOG2941|consensus | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.17 Score=54.22 Aligned_cols=169 Identities=12% Similarity=0.137 Sum_probs=105.7
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHh----CCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCC
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEK----HPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKP 384 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~----~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~ 384 (808)
....++++--.+.|...+--+++|+..+-++ .-++ .++..++.| .+|..+.+.++|+ +.
T Consensus 253 ~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~l-P~llciITG-----KGPlkE~Y~~~I~----~~------- 315 (444)
T KOG2941|consen 253 ERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNL-PSLLCIITG-----KGPLKEKYSQEIH----EK------- 315 (444)
T ss_pred CCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCC-CcEEEEEcC-----CCchhHHHHHHHH----Hh-------
Confidence 3456888888999999999999999854221 1111 133333332 3444444444444 33
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcCe--EEECCCCCCCChh--HHHHHHhccCCCceEEEcCCCCCcccc----CceEEE
Q psy2719 385 NWSPIRYIFGCIGQEELAALYRDSAI--ALVTPLRDGMNLV--AKEYVACQIREPGVLILSPFAGAGGMM----HEALLV 456 (808)
Q Consensus 385 ~~~~v~~~~~~v~~~el~aly~~Adv--~v~~S~~EG~gLv--~~Eama~~~~~~g~vVlS~~~G~~~~l----~~~llv 456 (808)
+|+.|.+.+-.+.-++++.++..||. ++-||. -|.-|+ +..-.-|+ -|+++-+|. |.++| .+|+++
T Consensus 316 ~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGcg----lPvcA~~fk-cl~ELVkh~eNGlvF 389 (444)
T KOG2941|consen 316 NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGCG----LPVCAVNFK-CLDELVKHGENGLVF 389 (444)
T ss_pred cccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcCC----Cceeeecch-hHHHHHhcCCCceEe
Confidence 36678888889999999999999995 455554 565554 44555563 345555665 55555 269998
Q ss_pred CCCCHHHHHHHHHHHhCC---CHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 457 NPYEIDAAANVLHRALCM---PRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 457 nP~d~~~lA~ai~~~L~~---~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
+ |.+++|+.|..+++. +..+.... ++.+.+..-.+|.+++-+..
T Consensus 390 ~--Ds~eLa~ql~~lf~~fp~~a~~l~~l----kkn~~e~~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 390 E--DSEELAEQLQMLFKNFPDNADELNQL----KKNLREEQELRWDESWERTA 436 (444)
T ss_pred c--cHHHHHHHHHHHHhcCCCCHHHHHHH----HHhhHHHHhhhHHHHHHHhh
Confidence 6 889999999999873 22333322 22233334467776665443
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.01 Score=63.76 Aligned_cols=42 Identities=21% Similarity=0.247 Sum_probs=30.4
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccc
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRT 592 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~ 592 (808)
++|+||+||||.+. . ...+.+.++|++|+++ +..++++|||+
T Consensus 3 ~~~~~D~DGtl~~~-----~-~~~~ga~e~l~~L~~~-g~~~~~~Tnns 44 (279)
T TIGR01452 3 QGFIFDCDGVLWLG-----E-RVVPGAPELLDRLARA-GKAALFVTNNS 44 (279)
T ss_pred cEEEEeCCCceEcC-----C-eeCcCHHHHHHHHHHC-CCeEEEEeCCC
Confidence 57999999999883 2 2344589999999876 44555666654
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.24 Score=56.49 Aligned_cols=171 Identities=13% Similarity=0.133 Sum_probs=89.7
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSP 388 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~ 388 (808)
.+..++.+..++ .|=-+..++.+.++|+..|+.+ |++...+. .. ++.+.+...+. |- +-..
T Consensus 283 ~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~------~~~l~~~~~~~----Gv-~~~R 343 (468)
T PF13844_consen 283 EDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SG------EARLRRRFAAH----GV-DPDR 343 (468)
T ss_dssp SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--TH------HHHHHHHHHHT----TS--GGG
T ss_pred CCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HH------HHHHHHHHHHc----CC-Chhh
Confidence 566677777876 5667899999999999999863 65555443 11 12333333332 22 1235
Q ss_pred EEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCc------cccC----ceEEECC
Q psy2719 389 IRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAG------GMMH----EALLVNP 458 (808)
Q Consensus 389 v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~------~~l~----~~llvnP 458 (808)
++| .+..+.++..+.|+.+||++-|..+-| +.+.+||+.+| ++|+|--+-.. ..+. .-++ -
T Consensus 344 i~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwmG-----VPvVTl~G~~~~sR~~aSiL~~lGl~ElI--A 414 (468)
T PF13844_consen 344 IIF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWMG-----VPVVTLPGETMASRVGASILRALGLPELI--A 414 (468)
T ss_dssp EEE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT-------EEB---SSGGGSHHHHHHHHHT-GGGB---
T ss_pred EEE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHcC-----CCEEeccCCCchhHHHHHHHHHcCCchhc--C
Confidence 654 557788899999999999999987766 67889999994 55555432211 1111 1122 2
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHh---cCCHHHHHHHHHHHHHc
Q psy2719 459 YEIDAAANVLHRALCMPRDERELRMSQLRHREQ---QLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 459 ~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~---~~~~~~W~~~~l~~l~~ 508 (808)
.|.++..+.-.++-+. .+.++...+++++... -++...|++++...+++
T Consensus 415 ~s~~eYv~~Av~La~D-~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 415 DSEEEYVEIAVRLATD-PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp SSHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 3555555544444443 3334333334444442 24777788777766654
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.0044 Score=58.88 Aligned_cols=55 Identities=18% Similarity=0.216 Sum_probs=48.3
Q ss_pred CCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 744 WDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
-+|-.+.+.|+++ ++++++ ++.++| |.++|+.+ |++|++.+ .+++++.|+|||..
T Consensus 82 ~dK~~a~~~L~~~-~~l~~e---~~ayiGDD~~Dlpvm~~v---Gls~a~~dAh~~v~~~a~~Vt~~ 141 (170)
T COG1778 82 SDKLAAFEELLKK-LNLDPE---EVAYVGDDLVDLPVMEKV---GLSVAVADAHPLLKQRADYVTSK 141 (170)
T ss_pred HhHHHHHHHHHHH-hCCCHH---HhhhhcCccccHHHHHHc---CCcccccccCHHHHHhhHhhhhc
Confidence 4899999999997 899976 899999 99999999 46699995 69999999999864
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.039 Score=57.58 Aligned_cols=21 Identities=14% Similarity=0.324 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCCCCeEEEEeCC
Q psy2719 609 TKRVLERLANMPDVNIGIISGR 630 (808)
Q Consensus 609 ~~~~l~~l~~~pg~~v~I~SGR 630 (808)
.++.|+.+.+ .|++++++|+|
T Consensus 119 a~elL~~l~~-~G~~i~iVTnr 139 (237)
T TIGR01672 119 ARQLIDMHQR-RGDAIFFVTGR 139 (237)
T ss_pred HHHHHHHHHH-CCCEEEEEeCC
Confidence 5666766654 49999999999
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.017 Score=57.44 Aligned_cols=37 Identities=24% Similarity=0.258 Sum_probs=26.6
Q ss_pred eEEEEecccccccCCC---CCCccCCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTS---HPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~---~~~~~~i~~~~~~~L~~L~~~ 580 (808)
+++|+|.||||+.... .+++..+.+.+.++|++|+++
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~ 41 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM 41 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC
Confidence 6899999999995322 112334567888899999877
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.023 Score=54.12 Aligned_cols=20 Identities=25% Similarity=0.421 Sum_probs=17.4
Q ss_pred CCeEEEEeCCChhhHHHhcC
Q psy2719 621 DVNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 621 g~~v~I~SGR~~~~l~~~~~ 640 (808)
|++++|+|||.-..++....
T Consensus 51 Gi~vAIITGr~s~ive~Ra~ 70 (170)
T COG1778 51 GIKVAIITGRDSPIVEKRAK 70 (170)
T ss_pred CCeEEEEeCCCCHHHHHHHH
Confidence 99999999999888877664
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.11 Score=50.19 Aligned_cols=62 Identities=19% Similarity=0.294 Sum_probs=48.5
Q ss_pred CCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCC
Q psy2719 541 NCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMP 620 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~p 620 (808)
.+-+-+++|+|.||++... ...+|++++-+..+++.
T Consensus 26 ~Gikgvi~DlDNTLv~wd~----~~~tpe~~~W~~e~k~~---------------------------------------- 61 (175)
T COG2179 26 HGIKGVILDLDNTLVPWDN----PDATPELRAWLAELKEA---------------------------------------- 61 (175)
T ss_pred cCCcEEEEeccCceecccC----CCCCHHHHHHHHHHHhc----------------------------------------
Confidence 4567899999999999754 36789999999999988
Q ss_pred CCeEEEEeCCChhhHHHhcCccceEE
Q psy2719 621 DVNIGIISGRTLENLMKMVNIEKVTY 646 (808)
Q Consensus 621 g~~v~I~SGR~~~~l~~~~~~~~~~l 646 (808)
|+.++|+|.....-+..+....++.+
T Consensus 62 gi~v~vvSNn~e~RV~~~~~~l~v~f 87 (175)
T COG2179 62 GIKVVVVSNNKESRVARAAEKLGVPF 87 (175)
T ss_pred CCEEEEEeCCCHHHHHhhhhhcCCce
Confidence 99999999877766666654333333
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=94.35 E-value=1.3 Score=50.13 Aligned_cols=140 Identities=17% Similarity=0.230 Sum_probs=78.9
Q ss_pred eEEEEEcC-ccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcc------CCCC
Q psy2719 312 KVILGVDR-LDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGR------FSKP 384 (808)
Q Consensus 312 ~iil~V~R-l~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~------~g~~ 384 (808)
.+++.-+| -+-.++++.+++|++.+.++ |++ .++....+.. +++.+++.+++. .++.. ....
T Consensus 208 lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~----~~v~~~~~~~----~~~~~~~~l~~~--g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 208 IALLPGSRPPEAYRNLKLLLRALEALPDS-QPF----VFLAAIVPSL----SLEKLQAILEDL--GWQLEGSSEDQTSLF 276 (396)
T ss_pred EEEECCCCHHHHHccHHHHHHHHHHHhhC-CCe----EEEEEeCCCC----CHHHHHHHHHhc--CceecCCccccchhh
Confidence 34556667 45557888999999998655 543 3544443321 222333333211 11000 0000
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCC------ccc---c-CceE
Q psy2719 385 NWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGA------GGM---M-HEAL 454 (808)
Q Consensus 385 ~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~------~~~---l-~~~l 454 (808)
...++.++ ....++..+|++||++|..| |.+..|++++++| .|+--+.+. .+. + ..++
T Consensus 277 ~~~~~~v~---~~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P----~Ilip~~~~q~na~~~~~~~~l~g~~~ 344 (396)
T TIGR03492 277 QKGTLEVL---LGRGAFAEILHWADLGIAMA-----GTATEQAVGLGKP----VIQLPGKGPQFTYGFAEAQSRLLGGSV 344 (396)
T ss_pred ccCceEEE---echHhHHHHHHhCCEEEECc-----CHHHHHHHHhCCC----EEEEeCCCCHHHHHHHHhhHhhcCCEE
Confidence 00012222 12467889999999999886 4566999999764 343331111 111 1 3466
Q ss_pred EECCCCHHHHHHHHHHHhCC
Q psy2719 455 LVNPYEIDAAANVLHRALCM 474 (808)
Q Consensus 455 lvnP~d~~~lA~ai~~~L~~ 474 (808)
.+...|++.++++|.++|+.
T Consensus 345 ~l~~~~~~~l~~~l~~ll~d 364 (396)
T TIGR03492 345 FLASKNPEQAAQVVRQLLAD 364 (396)
T ss_pred ecCCCCHHHHHHHHHHHHcC
Confidence 66667889999999999974
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.037 Score=53.32 Aligned_cols=36 Identities=25% Similarity=0.206 Sum_probs=24.9
Q ss_pred EEEEecccccccCCCCC-----CccCCCHHHHHHHHHHhcC
Q psy2719 545 SLILDYDGTLTPLTSHP-----DLAVMSEETKRVLERLANM 580 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~-----~~~~i~~~~~~~L~~L~~~ 580 (808)
+++||+||||++..... +...+-+.+.++|+.|+++
T Consensus 2 ~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~ 42 (147)
T TIGR01656 2 ALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA 42 (147)
T ss_pred eEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC
Confidence 68999999999864311 0123456777888888776
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.059 Score=48.45 Aligned_cols=29 Identities=21% Similarity=0.232 Sum_probs=23.2
Q ss_pred EEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 546 LILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 546 i~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
|+||+||||... ..+-|.+.++|++|++.
T Consensus 1 ~l~D~dGvl~~g------~~~ipga~e~l~~L~~~ 29 (101)
T PF13344_consen 1 FLFDLDGVLYNG------NEPIPGAVEALDALRER 29 (101)
T ss_dssp EEEESTTTSEET------TEE-TTHHHHHHHHHHT
T ss_pred CEEeCccEeEeC------CCcCcCHHHHHHHHHHc
Confidence 689999999973 24557789999999988
|
... |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.13 Score=55.65 Aligned_cols=57 Identities=18% Similarity=0.158 Sum_probs=40.5
Q ss_pred CceEEEEecccccccCCCCCC-------ccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHH
Q psy2719 542 CKLSLILDYDGTLTPLTSHPD-------LAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLE 614 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~-------~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~ 614 (808)
+.+++++|+||||........ +..+.+.+.++|++|.+.
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---------------------------------- 202 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA---------------------------------- 202 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC----------------------------------
Confidence 346899999999997543100 234566777777777766
Q ss_pred HHhCCCCCeEEEEeCCChhhHHHh
Q psy2719 615 RLANMPDVNIGIISGRTLENLMKM 638 (808)
Q Consensus 615 ~l~~~pg~~v~I~SGR~~~~l~~~ 638 (808)
|+.++++|||+....+..
T Consensus 203 ------g~~i~i~T~r~~~~~~~~ 220 (300)
T PHA02530 203 ------GYEIIVVSGRDGVCEEDT 220 (300)
T ss_pred ------CCEEEEEeCCChhhHHHH
Confidence 899999999987655443
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.14 Score=50.74 Aligned_cols=36 Identities=19% Similarity=0.099 Sum_probs=29.0
Q ss_pred CCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 541 NCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
..-+++++|+||||+... ...+.+.+.++|++|++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~----~~~~~pgv~e~L~~Lk~~ 58 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPD----HNEAYPALRDWIEELKAA 58 (170)
T ss_pred CCCCEEEEecCCccccCC----CCCcChhHHHHHHHHHHc
Confidence 345799999999999742 236778899999999887
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.07 Score=52.24 Aligned_cols=37 Identities=27% Similarity=0.302 Sum_probs=24.2
Q ss_pred eEEEEecccccccCCC------CCCcc-CCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTS------HPDLA-VMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~------~~~~~-~i~~~~~~~L~~L~~~ 580 (808)
++.+||+||||....+ ++++- .+++.+.++|++|.+.
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~ 44 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK 44 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc
Confidence 4789999999987532 12332 3456788899998777
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=92.89 E-value=0.14 Score=53.66 Aligned_cols=29 Identities=24% Similarity=0.236 Sum_probs=22.7
Q ss_pred EEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 546 LILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 546 i~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
++||+||||++.. .+.+.+.++|+.+++.
T Consensus 1 ~lfD~DGvL~~~~------~~~~~a~e~i~~l~~~ 29 (236)
T TIGR01460 1 FLFDIDGVLWLGH------KPIPGAAEALNRLRAK 29 (236)
T ss_pred CEEeCcCccCcCC------ccCcCHHHHHHHHHHC
Confidence 5789999999832 2345889999999877
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.50 E-value=0.1 Score=51.15 Aligned_cols=37 Identities=22% Similarity=0.209 Sum_probs=25.0
Q ss_pred eEEEEecccccccCCCC------CCccCCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTSH------PDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~------~~~~~i~~~~~~~L~~L~~~ 580 (808)
+++|||.||||....+. ++...+-+.+.++|++|.++
T Consensus 2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~ 44 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA 44 (161)
T ss_pred CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC
Confidence 57999999999874221 11123446677888888776
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=92.42 E-value=1.9 Score=46.92 Aligned_cols=141 Identities=11% Similarity=0.095 Sum_probs=88.8
Q ss_pred CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy2719 311 LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIR 390 (808)
Q Consensus 311 ~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~ 390 (808)
+..|+-=-.-|++-++...|+++.+...+ ++.++ | .-+-+ ..++++.++|.+...++ ||.. .+.
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~~------~~kIi-v-PLsYg--~~n~~Yi~~V~~~~~~l---F~~~---~~~ 248 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFGD------DVKII-V-PLSYG--ANNQAYIQQVIQAGKEL---FGAE---NFQ 248 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcCC------CeEEE-E-ECCCC--CchHHHHHHHHHHHHHh---cCcc---cee
Confidence 34444444667888888888877654321 22322 1 11211 12345667777666554 3322 456
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCC-CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-ceEEE----CCCCHHHH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPL-RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-EALLV----NPYEIDAA 464 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~-~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-~~llv----nP~d~~~l 464 (808)
.+..+++.+|+.++++.||+.++... ..|+|..++= +.+ |.++++|+..-....+. .++.| +.-|...+
T Consensus 249 iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lL-l~~----G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v 323 (360)
T PF07429_consen 249 ILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLL-LQL----GKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALV 323 (360)
T ss_pred EhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHH-HHc----CCeEEEecCChHHHHHHhCCCeEEeccccCCHHHH
Confidence 67899999999999999999999997 5999987652 444 46799999877766664 34433 44455555
Q ss_pred HHHHHHHh
Q psy2719 465 ANVLHRAL 472 (808)
Q Consensus 465 A~ai~~~L 472 (808)
++|=+++.
T Consensus 324 ~ea~rql~ 331 (360)
T PF07429_consen 324 REAQRQLA 331 (360)
T ss_pred HHHHHHHh
Confidence 55544443
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.13 Score=51.16 Aligned_cols=39 Identities=23% Similarity=0.178 Sum_probs=27.6
Q ss_pred CceEEEEecccccccCCCCC--CccCCCHHHHHHHHHHhcC
Q psy2719 542 CKLSLILDYDGTLTPLTSHP--DLAVMSEETKRVLERLANM 580 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~--~~~~i~~~~~~~L~~L~~~ 580 (808)
.-|+|++|.||||..+..-. +.-.+-+.+.+.|++|++.
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~ 43 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN 43 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC
Confidence 45789999999997653211 2234567888889988877
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=92.38 E-value=0.28 Score=51.21 Aligned_cols=23 Identities=22% Similarity=0.364 Sum_probs=17.7
Q ss_pred HHHHHHHHHhCCCCCeEEEEeCCC
Q psy2719 608 ETKRVLERLANMPDVNIGIISGRT 631 (808)
Q Consensus 608 ~~~~~l~~l~~~pg~~v~I~SGR~ 631 (808)
-.++.|+.|-+ .|+.++++|||+
T Consensus 118 Ga~elL~~L~~-~G~~I~iVTnR~ 140 (237)
T PRK11009 118 VARQLIDMHVK-RGDSIYFITGRT 140 (237)
T ss_pred HHHHHHHHHHH-CCCeEEEEeCCC
Confidence 36677777743 499999999996
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.35 E-value=0.23 Score=57.75 Aligned_cols=51 Identities=24% Similarity=0.207 Sum_probs=33.8
Q ss_pred CCceEEEEecccccccCCC------CCCccC-CCHHHHHHHHHHhcCCCCccccccccc
Q psy2719 541 NCKLSLILDYDGTLTPLTS------HPDLAV-MSEETKRVLERLANMPDVNIGIISGRT 592 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~------~~~~~~-i~~~~~~~L~~L~~~~~~~~~~~sgr~ 592 (808)
.+++++|||+||||....+ ++++-+ +.+.+.+.|++|.++ +-.+.|+|..+
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~-Gy~IvIvTNQ~ 223 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD-GFKICIFTNQG 223 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC-CCEEEEEECCc
Confidence 4567999999999996432 112222 467888999999876 44455555544
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=92.32 E-value=0.12 Score=51.64 Aligned_cols=38 Identities=21% Similarity=0.284 Sum_probs=24.3
Q ss_pred ceEEEEecccccccCCCC----CCccCCCHHHHHHHHHHhcC
Q psy2719 543 KLSLILDYDGTLTPLTSH----PDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~----~~~~~i~~~~~~~L~~L~~~ 580 (808)
.|+++||.||||...... .....+-+.+.++|++|++.
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~ 44 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA 44 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC
Confidence 368999999998654311 11123446667777777766
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.99 E-value=0.38 Score=51.44 Aligned_cols=59 Identities=15% Similarity=0.086 Sum_probs=38.0
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeC-C-CCc-cccccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVD-S-SPT-VKSSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~-~-~~~-vk~~A~~~~~~ 805 (808)
.-.|...++.++++ +|++++ ++++|| |++|-+.+|-..+.|.-| + .+. .+..++++.++
T Consensus 156 ~Kp~p~~~~~~~~~-~g~~~~---~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~ 221 (272)
T PRK13223 156 KKPDPAALLFVMKM-AGVPPS---QSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDD 221 (272)
T ss_pred CCCCcHHHHHHHHH-hCCChh---HEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECC
Confidence 34567788999986 798865 799999 888888886222223333 2 222 23467777653
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.94 E-value=0.28 Score=50.75 Aligned_cols=17 Identities=29% Similarity=0.241 Sum_probs=14.2
Q ss_pred CCceEEEEecccccccC
Q psy2719 541 NCKLSLILDYDGTLTPL 557 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~ 557 (808)
.++.+++||+|-|+++.
T Consensus 75 dg~~A~V~DIDET~LsN 91 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSN 91 (229)
T ss_pred CCCcEEEEccccccccC
Confidence 35678999999999984
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.66 E-value=0.21 Score=55.20 Aligned_cols=48 Identities=19% Similarity=0.248 Sum_probs=34.9
Q ss_pred ceEEEEecccccccCC------CCCCccCCCHHHHHHHHHHhcCCCCcccccccc
Q psy2719 543 KLSLILDYDGTLTPLT------SHPDLAVMSEETKRVLERLANMPDVNIGIISGR 591 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~------~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr 591 (808)
++++|||.||||.... ..++...+.|.+.++|.+|+++ +..++|+|+.
T Consensus 2 ~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~-G~kL~IvTNq 55 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKA-GYKLVMVTNQ 55 (354)
T ss_pred CcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhC-CCeEEEEECC
Confidence 5789999999999852 1223456778899999999765 4456666664
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=91.65 E-value=0.27 Score=48.32 Aligned_cols=37 Identities=30% Similarity=0.263 Sum_probs=31.1
Q ss_pred CCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 540 GNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 540 ~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
...-+.++||.|+||++. ....++++..+.++++++.
T Consensus 38 ~~Gik~li~DkDNTL~~~----~~~~i~~~~~~~~~~l~~~ 74 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTPP----YEDEIPPEYAEWLNELKKQ 74 (168)
T ss_pred hcCceEEEEcCCCCCCCC----CcCcCCHHHHHHHHHHHHH
Confidence 356789999999999984 4458999999999999876
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.43 E-value=8.2 Score=42.99 Aligned_cols=82 Identities=20% Similarity=0.282 Sum_probs=53.8
Q ss_pred HHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCC--cccc---------CceEEECCCC--HHHHH
Q psy2719 399 EELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGA--GGMM---------HEALLVNPYE--IDAAA 465 (808)
Q Consensus 399 ~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~--~~~l---------~~~llvnP~d--~~~lA 465 (808)
+++.++|++||+.+.=| =++++-|..|++.| .|+=-.... .++. ..|+.+.-.+ ++.++
T Consensus 244 ~dm~~~~~~ADLvIsRa----Ga~Ti~E~~a~g~P----~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~ 315 (357)
T COG0707 244 DDMAALLAAADLVISRA----GALTIAELLALGVP----AILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLA 315 (357)
T ss_pred hhHHHHHHhccEEEeCC----cccHHHHHHHhCCC----EEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHH
Confidence 57999999999988644 25899999999764 333333333 1222 1377776666 88999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHhHH
Q psy2719 466 NVLHRALCMPRDERELRMSQLRHR 489 (808)
Q Consensus 466 ~ai~~~L~~~~~e~~~r~~~~~~~ 489 (808)
+.|.++++. ++...++.++.+..
T Consensus 316 ~~i~~l~~~-~~~l~~m~~~a~~~ 338 (357)
T COG0707 316 ELILRLLSN-PEKLKAMAENAKKL 338 (357)
T ss_pred HHHHHHhcC-HHHHHHHHHHHHhc
Confidence 999999974 33333333333433
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=91.30 E-value=0.23 Score=51.25 Aligned_cols=16 Identities=31% Similarity=0.634 Sum_probs=13.4
Q ss_pred ceEEEEecccccccCC
Q psy2719 543 KLSLILDYDGTLTPLT 558 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~ 558 (808)
+++++||+||||+...
T Consensus 3 ~~~vifDfDgTi~~~d 18 (219)
T PRK09552 3 SIQIFCDFDGTITNND 18 (219)
T ss_pred CcEEEEcCCCCCCcch
Confidence 4589999999999853
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=91.29 E-value=0.33 Score=48.23 Aligned_cols=32 Identities=19% Similarity=0.242 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeCC-ChhhHHHhc
Q psy2719 607 EETKRVLERLANMPDVNIGIISGR-TLENLMKMV 639 (808)
Q Consensus 607 ~~~~~~l~~l~~~pg~~v~I~SGR-~~~~l~~~~ 639 (808)
+.+.+.|+.|.+ .|..++|+|+. ....+...+
T Consensus 48 pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 48 KEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred ccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 345666666654 48999999988 666555444
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.21 Score=48.07 Aligned_cols=30 Identities=27% Similarity=0.495 Sum_probs=18.5
Q ss_pred HHHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 609 TKRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 609 ~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
+.+.|+.|.+ .|++++|+|++....+...+
T Consensus 69 ~~e~l~~L~~-~g~~~~i~T~~~~~~~~~~~ 98 (154)
T TIGR01549 69 AADLLKRLKE-AGIKLGIISNGSLRAQKLLL 98 (154)
T ss_pred HHHHHHHHHH-CcCeEEEEeCCchHHHHHHH
Confidence 4566666654 36777888777765554433
|
HAD subfamilies caused by an overly broad single model. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=91.20 E-value=0.42 Score=48.39 Aligned_cols=49 Identities=10% Similarity=0.158 Sum_probs=32.7
Q ss_pred EeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe-CHHHHHhccCCcc-EEEeCC
Q psy2719 738 AKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG-NEDAMLALQGIAC-TFRVDS 791 (808)
Q Consensus 738 v~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G-D~~Mf~~~~~~~~-~vav~~ 791 (808)
+.|- ...|-.=++.++++ +|++++ ++++|= +..-.++|...|+ ++.+.+
T Consensus 156 ~KPd-p~iK~yHle~ll~~-~gl~pe---E~LFIDD~~~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 156 DAPM-PLDKSYHLKQVCSD-FNVNPD---EILFIDDDMNNCKNALKEGYIALHVTG 206 (219)
T ss_pred cCCC-ccchHHHHHHHHHH-cCCCHH---HeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence 3554 56777777889987 899875 789998 4555666654453 344443
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=91.04 E-value=0.18 Score=51.69 Aligned_cols=14 Identities=36% Similarity=0.591 Sum_probs=12.4
Q ss_pred eEEEEecccccccC
Q psy2719 544 LSLILDYDGTLTPL 557 (808)
Q Consensus 544 rli~~D~DGTLl~~ 557 (808)
++|+||+||||++.
T Consensus 4 ~~viFD~DGTL~ds 17 (214)
T PRK13288 4 NTVLFDLDGTLINT 17 (214)
T ss_pred cEEEEeCCCcCccC
Confidence 58999999999983
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=90.83 E-value=0.3 Score=51.16 Aligned_cols=43 Identities=12% Similarity=0.068 Sum_probs=32.9
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccc
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRT 592 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~ 592 (808)
-++++||+||||... ..+.|.+.++|++|++. +..++++|+.+
T Consensus 8 ~~~~~~D~dG~l~~~------~~~~pga~e~L~~L~~~-G~~~~ivTN~~ 50 (242)
T TIGR01459 8 YDVFLLDLWGVIIDG------NHTYPGAVQNLNKIIAQ-GKPVYFVSNSP 50 (242)
T ss_pred CCEEEEecccccccC------CccCccHHHHHHHHHHC-CCEEEEEeCCC
Confidence 357999999999873 24578899999999876 55677776643
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=90.74 E-value=0.42 Score=47.03 Aligned_cols=36 Identities=17% Similarity=0.221 Sum_probs=29.3
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhc
Q psy2719 740 PPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLAL 780 (808)
Q Consensus 740 p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~ 780 (808)
+. +.+|+.+++.+++. ++++.+ .++++| |.+|++.+
T Consensus 138 ~~-~~~K~~~l~~~~~~-~~~~~~---~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 138 PE-GECKGKVLKELLEE-SKITLK---KIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred CC-cchHHHHHHHHHHH-hCCCHH---HEEEEeCCHHHHHHHhcC
Confidence 44 78999999998886 687754 799999 99998764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=90.67 E-value=0.29 Score=47.50 Aligned_cols=36 Identities=17% Similarity=0.204 Sum_probs=21.4
Q ss_pred EEEEecccccccCC------CCCCccCCCHHHHHHHHHHhcC
Q psy2719 545 SLILDYDGTLTPLT------SHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 545 li~~D~DGTLl~~~------~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
++++|+|||++... +.-......+.+.++.+++.++
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~ 42 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN 42 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC
Confidence 47899999999741 1001113445566666666665
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=90.63 E-value=0.32 Score=51.67 Aligned_cols=18 Identities=28% Similarity=0.427 Sum_probs=14.6
Q ss_pred CCceEEEEecccccccCC
Q psy2719 541 NCKLSLILDYDGTLTPLT 558 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~ 558 (808)
.++..|+||+|+|+++..
T Consensus 73 ~kp~AVV~DIDeTvLdns 90 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNS 90 (266)
T ss_pred CCCCEEEEeCccccccCh
Confidence 345799999999999753
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=90.18 E-value=1.8 Score=48.28 Aligned_cols=132 Identities=15% Similarity=0.136 Sum_probs=80.0
Q ss_pred EcCccccCCh-HHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCC
Q psy2719 317 VDRLDYTKGL-VHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGC 395 (808)
Q Consensus 317 V~Rl~~~KGi-~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~ 395 (808)
=+|-...|-+ +.+++|++++.+++|+++ +++...+. . ..+.+++.....+.. .++...
T Consensus 192 GSR~~EI~rllP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~~~~------~~~~~~--- 250 (373)
T PF02684_consen 192 GSRKSEIKRLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEYPPD------VSIVII--- 250 (373)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhhCCC------CeEEEc---
Confidence 5676655554 888999999999999874 44333221 1 122233333222211 122222
Q ss_pred CCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCC-------------CceEEEcCCCCCccccCc-----eEEEC
Q psy2719 396 IGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIRE-------------PGVLILSPFAGAGGMMHE-----ALLVN 457 (808)
Q Consensus 396 v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~-------------~g~vVlS~~~G~~~~l~~-----~llvn 457 (808)
..+...++++||+.+++| |.+.+|++..++|. ...+|-..+.|....+-+ -++-+
T Consensus 251 --~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~ 323 (373)
T PF02684_consen 251 --EGESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQE 323 (373)
T ss_pred --CCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcc
Confidence 234567899999999999 89999999998761 111222334444443322 24445
Q ss_pred CCCHHHHHHHHHHHhCCCH
Q psy2719 458 PYEIDAAANVLHRALCMPR 476 (808)
Q Consensus 458 P~d~~~lA~ai~~~L~~~~ 476 (808)
-.+++.+++++..+|..+.
T Consensus 324 ~~~~~~i~~~~~~ll~~~~ 342 (373)
T PF02684_consen 324 DATPENIAAELLELLENPE 342 (373)
T ss_pred cCCHHHHHHHHHHHhcCHH
Confidence 5688999999999998543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=90.07 E-value=8.7 Score=43.16 Aligned_cols=99 Identities=12% Similarity=0.162 Sum_probs=60.3
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccc----c---CceEEECC--CCH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGM----M---HEALLVNP--YEI 461 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~----l---~~~llvnP--~d~ 461 (808)
.+.+++++. .++..||++|..+ |.| +.+|++++++| +|+.-..+-... + +.|..++. .+.
T Consensus 278 ~~~~~~p~~---~ll~~~~~~I~hg---G~~-t~~Eal~~G~P----~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~ 346 (392)
T TIGR01426 278 EVRQWVPQL---EILKKADAFITHG---GMN-STMEALFNGVP----MVAVPQGADQPMTARRIAELGLGRHLPPEEVTA 346 (392)
T ss_pred EEeCCCCHH---HHHhhCCEEEECC---Cch-HHHHHHHhCCC----EEecCCcccHHHHHHHHHHCCCEEEeccccCCH
Confidence 445788875 5688999988654 555 67999999754 555433322111 1 23666654 467
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcC-CHHHHHHHH
Q psy2719 462 DAAANVLHRALCMPRDERELRMSQLRHREQQL-DVNHWMNSF 502 (808)
Q Consensus 462 ~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~-~~~~W~~~~ 502 (808)
++++++|.++|+.+ +.+++.+.+.+.+... .....++..
T Consensus 347 ~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 347 EKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred HHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 89999999999753 3444445454444433 444444433
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=90.07 E-value=0.3 Score=50.07 Aligned_cols=30 Identities=17% Similarity=0.239 Sum_probs=19.6
Q ss_pred HHHHH-HHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 609 TKRVL-ERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 609 ~~~~l-~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
.++.| +.+. ..|..++|+|+.+...++.++
T Consensus 100 a~e~L~~~l~-~~G~~l~IvSas~~~~~~~il 130 (211)
T PRK11590 100 VQERLTTYLL-SSDADVWLITGSPQPLVEQVY 130 (211)
T ss_pred HHHHHHHHHH-hCCCEEEEEeCCcHHHHHHHH
Confidence 45555 3343 247889999998877666554
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=90.04 E-value=0.35 Score=49.62 Aligned_cols=54 Identities=15% Similarity=0.255 Sum_probs=43.4
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccCc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNH 805 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~ 805 (808)
.|+..++.++++ ++++++ +++++| |++|.+.++ . +++++..+.++..|+++..+
T Consensus 152 ~k~~~~~~~~~~-~~~~~~---~~i~iGDs~~Di~aa~~ag-~--~i~~~~~~~~~~~a~~~i~~ 209 (219)
T TIGR00338 152 YKGKTLLILLRK-EGISPE---NTVAVGDGANDLSMIKAAG-L--GIAFNAKPKLQQKADICINK 209 (219)
T ss_pred ccHHHHHHHHHH-cCCCHH---HEEEEECCHHHHHHHHhCC-C--eEEeCCCHHHHHhchhccCC
Confidence 588899999886 788765 799999 888888884 4 47887777788999998653
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=89.96 E-value=0.42 Score=49.73 Aligned_cols=15 Identities=27% Similarity=0.514 Sum_probs=13.0
Q ss_pred EEEEecccccccCCC
Q psy2719 545 SLILDYDGTLTPLTS 559 (808)
Q Consensus 545 li~~D~DGTLl~~~~ 559 (808)
|++||+|+||++..+
T Consensus 2 LvvfDFD~TIvd~ds 16 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDS 16 (234)
T ss_pred EEEEeCCCCccCCcc
Confidence 789999999998654
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=89.77 E-value=0.35 Score=49.79 Aligned_cols=56 Identities=13% Similarity=0.038 Sum_probs=34.5
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC--C-CccccccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS--S-PTVKSSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~--~-~~vk~~A~~~~~~ 805 (808)
+-.|..+++.++++ +|.+ ++++|| |+.|.++++ ..+.++.+. . +.....|+|+..+
T Consensus 153 ~~~K~~~i~~~~~~-~~~~-----~~i~iGDs~~Di~aa~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~ 215 (224)
T PLN02954 153 SGGKAEAVQHIKKK-HGYK-----TMVMIGDGATDLEARKPGG-ADLFIGYGGVQVREAVAAKADWFVTD 215 (224)
T ss_pred CccHHHHHHHHHHH-cCCC-----ceEEEeCCHHHHHhhhcCC-CCEEEecCCCccCHHHHhcCCEEECC
Confidence 34688888888875 6643 689999 888855532 343344442 1 2234457776653
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=89.46 E-value=2.8 Score=45.00 Aligned_cols=92 Identities=15% Similarity=0.163 Sum_probs=58.3
Q ss_pred CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy2719 311 LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIR 390 (808)
Q Consensus 311 ~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~ 390 (808)
+++++..|-.++.+....+++|+..+. +++ ++ .+++| +.. +.+ +++++.+.. + ..+.
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~--~i-~vv~G-~~~---~~~----~~l~~~~~~-~--------~~i~ 227 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INI--SI-TLVTG-SSN---PNL----DELKKFAKE-Y--------PNII 227 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCc--eE-EEEEC-CCC---cCH----HHHHHHHHh-C--------CCEE
Confidence 578999999999887777888876532 222 22 23344 321 122 334444332 1 1233
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccC
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIR 433 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~ 433 (808)
+.++ .+++..+|+.||+++.+ -|.++.|+++++.|
T Consensus 228 -~~~~--~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~P 262 (279)
T TIGR03590 228 -LFID--VENMAELMNEADLAIGA-----AGSTSWERCCLGLP 262 (279)
T ss_pred -EEeC--HHHHHHHHHHCCEEEEC-----CchHHHHHHHcCCC
Confidence 3333 36899999999999984 45899999999764
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=89.09 E-value=0.13 Score=53.51 Aligned_cols=16 Identities=19% Similarity=0.331 Sum_probs=13.8
Q ss_pred CCceEEEEeccccccc
Q psy2719 541 NCKLSLILDYDGTLTP 556 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~ 556 (808)
.++..++||+|+|+++
T Consensus 70 ~~~~avv~DIDeTvLs 85 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLS 85 (229)
T ss_dssp TSEEEEEEESBTTTEE
T ss_pred CCCcEEEEECCccccc
Confidence 4567999999999986
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=88.92 E-value=0.59 Score=47.00 Aligned_cols=49 Identities=10% Similarity=0.120 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWK 800 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~ 800 (808)
+|+.+++.++++ +|++++ +++++| |.+|++.++ +.+++...+.+...|+
T Consensus 147 ~k~~~~~~~~~~-~~~~~~---~~i~iGDs~~D~~~a~~ag---~~~a~~~~~~~~~~a~ 199 (201)
T TIGR01491 147 NKGEAVERLKRE-LNPSLT---ETVAVGDSKNDLPMFEVAD---ISISLGDEGHADYLAK 199 (201)
T ss_pred cHHHHHHHHHHH-hCCCHH---HEEEEcCCHhHHHHHHhcC---CeEEECCCccchhhcc
Confidence 698899999886 788764 799999 899999984 4588876555555553
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=88.61 E-value=0.83 Score=43.99 Aligned_cols=31 Identities=6% Similarity=0.071 Sum_probs=22.5
Q ss_pred HHHHHHHHHhCCCCCeEEEEeCCChhhHHHhcC
Q psy2719 608 ETKRVLERLANMPDVNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 608 ~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~ 640 (808)
.+.+.|+.|.. ++.++|+|..+...++..+.
T Consensus 49 G~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 49 GVDEFLKRASE--LFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CHHHHHHHHHh--ccEEEEEeCCcHHHHHHHHH
Confidence 45667777753 78999999988877665553
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.33 E-value=8.9 Score=41.35 Aligned_cols=125 Identities=14% Similarity=0.162 Sum_probs=82.6
Q ss_pred CCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEE-EEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy2719 310 NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQ-ISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSP 388 (808)
Q Consensus 310 ~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~-ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~ 388 (808)
++..|+-=-.-|++-++...|+++.+...+ ++.++. .+.|+ ++ +++.++|.+...++ ||. ..
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-gn----~~Yi~~V~~~~~~l---F~~---~~ 207 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-NN----QAYIEEVRQAGLAL---FGA---EN 207 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-CC----HHHHHHHHHHHHHh---cCc---cc
Confidence 344444445678899999999998776543 233332 23332 22 34566776666554 442 25
Q ss_pred EEEEcCCCCHHHHHHHHHhcCeEEECCC-CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-ceEEE
Q psy2719 389 IRYIFGCIGQEELAALYRDSAIALVTPL-RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-EALLV 456 (808)
Q Consensus 389 v~~~~~~v~~~el~aly~~Adv~v~~S~-~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-~~llv 456 (808)
+..++..++.+|+.++++.||+.++.-- .+|+|..++=- .. |.++++|+..-.-..+. .|+-|
T Consensus 208 ~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi-~~----G~~v~l~r~n~fwqdl~e~gv~V 272 (322)
T PRK02797 208 FQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLI-QL----GKPVVLSRDNPFWQDLTEQGLPV 272 (322)
T ss_pred EEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHH-HC----CCcEEEecCCchHHHHHhCCCeE
Confidence 6778899999999999999999998875 69999887643 33 35688887766655563 34433
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.80 E-value=0.36 Score=48.95 Aligned_cols=13 Identities=38% Similarity=0.659 Sum_probs=11.7
Q ss_pred eEEEEeccccccc
Q psy2719 544 LSLILDYDGTLTP 556 (808)
Q Consensus 544 rli~~D~DGTLl~ 556 (808)
++++||+||||++
T Consensus 2 ~~v~FD~DGTL~~ 14 (205)
T PRK13582 2 EIVCLDLEGVLVP 14 (205)
T ss_pred eEEEEeCCCCChh
Confidence 5899999999995
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=87.11 E-value=0.64 Score=49.10 Aligned_cols=16 Identities=25% Similarity=0.308 Sum_probs=13.3
Q ss_pred CceEEEEecccccccC
Q psy2719 542 CKLSLILDYDGTLTPL 557 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~ 557 (808)
.+-+++||+|+|+++.
T Consensus 100 ~~dA~V~DIDET~LsN 115 (275)
T TIGR01680 100 EKDTFLFNIDGTALSN 115 (275)
T ss_pred CCCEEEEECccccccC
Confidence 3568999999999963
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=87.09 E-value=18 Score=40.43 Aligned_cols=71 Identities=11% Similarity=0.126 Sum_probs=50.2
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccc-cC---ceEEECCCCHHHHH
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGM-MH---EALLVNPYEIDAAA 465 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~-l~---~~llvnP~d~~~lA 465 (808)
+.+.+.++..++.+|++.|++++-.|. |. ..||.+.++| ++.+. -.++ +. +.++| +.|++++.
T Consensus 264 v~l~~~l~~~~~l~Ll~~a~~vitdSS----gg-i~EA~~lg~P---vv~l~----~R~e~~~~g~nvl~v-g~~~~~I~ 330 (365)
T TIGR03568 264 FRLFKSLGQERYLSLLKNADAVIGNSS----SG-IIEAPSFGVP---TINIG----TRQKGRLRADSVIDV-DPDKEEIV 330 (365)
T ss_pred EEEECCCChHHHHHHHHhCCEEEEcCh----hH-HHhhhhcCCC---EEeec----CCchhhhhcCeEEEe-CCCHHHHH
Confidence 456789999999999999999995552 22 2899999754 22222 2333 22 24557 67999999
Q ss_pred HHHHHHhC
Q psy2719 466 NVLHRALC 473 (808)
Q Consensus 466 ~ai~~~L~ 473 (808)
+++.++++
T Consensus 331 ~a~~~~~~ 338 (365)
T TIGR03568 331 KAIEKLLD 338 (365)
T ss_pred HHHHHHhC
Confidence 99999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=87.00 E-value=1.5 Score=48.08 Aligned_cols=38 Identities=24% Similarity=0.252 Sum_probs=26.2
Q ss_pred ceEEEEecccccccCC--CC-CC---ccCCCHHHHHHHHHHhcC
Q psy2719 543 KLSLILDYDGTLTPLT--SH-PD---LAVMSEETKRVLERLANM 580 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~--~~-~~---~~~i~~~~~~~L~~L~~~ 580 (808)
.|+|++|+|+||.... ++ +. ...+.+.+.+.|++|.+.
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~ 46 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQ 46 (320)
T ss_pred eEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhC
Confidence 5799999999998753 11 11 012347788889998876
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.73 E-value=0.84 Score=48.50 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=29.8
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCcccccccc
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGR 591 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr 591 (808)
..++||+||||..- ...-|...++|++|+++ +..++++|..
T Consensus 9 ~~~l~DlDGvl~~G------~~~ipga~e~l~~L~~~-g~~~iflTNn 49 (269)
T COG0647 9 DGFLFDLDGVLYRG------NEAIPGAAEALKRLKAA-GKPVIFLTNN 49 (269)
T ss_pred CEEEEcCcCceEeC------CccCchHHHHHHHHHHc-CCeEEEEeCC
Confidence 46999999999973 24557789999999987 3444444433
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=86.37 E-value=1.1 Score=44.28 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=22.8
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLAL 780 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~ 780 (808)
+..|+..++.++++ + .+ .++++| |+.|.+.+
T Consensus 147 g~~K~~~~~~~~~~-~---~~---~~i~iGD~~~D~~aa~~~ 181 (188)
T TIGR01489 147 GCCKGKVIHKLSEP-K---YQ---HIIYIGDGVTDVCPAKLS 181 (188)
T ss_pred CCCHHHHHHHHHhh-c---Cc---eEEEECCCcchhchHhcC
Confidence 77898888887764 2 22 689999 77777666
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=86.32 E-value=1.7 Score=51.45 Aligned_cols=50 Identities=12% Similarity=0.078 Sum_probs=36.4
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
+|...++.+.+. + . .++++| |.+|++.++ ++++|++ .+..+..||+++.+
T Consensus 435 ~K~~~v~~l~~~--~---~---~v~~vGDg~nD~~al~~A~---vgia~g~~~~~~~~~Ad~vi~~ 489 (556)
T TIGR01525 435 DKLAIVKELQEE--G---G---VVAMVGDGINDAPALAAAD---VGIAMGAGSDVAIEAADIVLLN 489 (556)
T ss_pred HHHHHHHHHHHc--C---C---EEEEEECChhHHHHHhhCC---EeEEeCCCCHHHHHhCCEEEeC
Confidence 566666665432 1 1 699999 999999995 4588885 56677889998875
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=85.51 E-value=0.74 Score=46.95 Aligned_cols=48 Identities=15% Similarity=0.197 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCcccccccccc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGS 803 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~ 803 (808)
.|...++.+ +. .+. +++++| |++|++.++ .+ +++...+.|++.|+-..
T Consensus 132 ~K~~~l~~l-~~-~~~------~~v~vGDs~nDl~ml~~Ag-~~--ia~~ak~~~~~~~~~~~ 183 (203)
T TIGR02137 132 PKRQSVIAF-KS-LYY------RVIAAGDSYNDTTMLSEAH-AG--ILFHAPENVIREFPQFP 183 (203)
T ss_pred hHHHHHHHH-Hh-hCC------CEEEEeCCHHHHHHHHhCC-CC--EEecCCHHHHHhCCCCC
Confidence 688888877 33 342 589999 999999995 44 88888888888887654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=84.91 E-value=2.7 Score=52.40 Aligned_cols=49 Identities=8% Similarity=0.058 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSN 804 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~ 804 (808)
+|..+++.+.++ .. .++++| |.+|++.++ . +++|++ .+..++.||+++-
T Consensus 700 ~K~~~i~~l~~~-----~~---~v~~vGDg~nD~~al~~Ag-v--gia~g~g~~~a~~~ad~vl~ 753 (834)
T PRK10671 700 GKAEAIKRLQSQ-----GR---QVAMVGDGINDAPALAQAD-V--GIAMGGGSDVAIETAAITLM 753 (834)
T ss_pred HHHHHHHHHhhc-----CC---EEEEEeCCHHHHHHHHhCC-e--eEEecCCCHHHHHhCCEEEe
Confidence 588777776432 11 699999 999999995 4 599996 6778999998775
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=84.88 E-value=26 Score=38.89 Aligned_cols=133 Identities=13% Similarity=0.147 Sum_probs=75.5
Q ss_pred CCCeEEEEEcCcccc---CChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCC
Q psy2719 309 ENLKVILGVDRLDYT---KGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPN 385 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~---KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~ 385 (808)
.++.+++..-|.... .....++.+++.+.+. +++ .+|....++ +.....+.+...+++
T Consensus 179 ~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~----~vi~~~hn~-------p~~~~~i~~~l~~~~------- 239 (346)
T PF02350_consen 179 PKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNV----PVIFPLHNN-------PRGSDIIIEKLKKYD------- 239 (346)
T ss_dssp TSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTE----EEEEE--S--------HHHHHHHHHHHTT-T-------
T ss_pred CCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCC----cEEEEecCC-------chHHHHHHHHhcccC-------
Confidence 344455555555443 3456777788887776 443 345444322 123333333332221
Q ss_pred CccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHH-HHHHhccCCCceEEEcCCCCCcccc---CceEEECCCCH
Q psy2719 386 WSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAK-EYVACQIREPGVLILSPFAGAGGMM---HEALLVNPYEI 461 (808)
Q Consensus 386 ~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~-Eama~~~~~~g~vVlS~~~G~~~~l---~~~llvnP~d~ 461 (808)
.++ +..++++.++.++++.|+++|--| | .+. ||..+++| +|.=...|-.++. ...++|. .|.
T Consensus 240 --~v~-~~~~l~~~~~l~ll~~a~~vvgdS-----s-GI~eEa~~lg~P----~v~iR~~geRqe~r~~~~nvlv~-~~~ 305 (346)
T PF02350_consen 240 --NVR-LIEPLGYEEYLSLLKNADLVVGDS-----S-GIQEEAPSLGKP----VVNIRDSGERQEGRERGSNVLVG-TDP 305 (346)
T ss_dssp --TEE-EE----HHHHHHHHHHESEEEESS-----H-HHHHHGGGGT------EEECSSS-S-HHHHHTTSEEEET-SSH
T ss_pred --CEE-EECCCCHHHHHHHHhcceEEEEcC-----c-cHHHHHHHhCCe----EEEecCCCCCHHHHhhcceEEeC-CCH
Confidence 344 457889999999999999998777 3 345 99999654 5555555666554 2466675 799
Q ss_pred HHHHHHHHHHhCC
Q psy2719 462 DAAANVLHRALCM 474 (808)
Q Consensus 462 ~~lA~ai~~~L~~ 474 (808)
+++.++|.+++..
T Consensus 306 ~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 306 EAIIQAIEKALSD 318 (346)
T ss_dssp HHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999964
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=84.81 E-value=1.1 Score=45.92 Aligned_cols=29 Identities=10% Similarity=0.143 Sum_probs=18.5
Q ss_pred HHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 610 KRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 610 ~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
++.++.|.+ .|+.++|+||.....++.++
T Consensus 76 ~e~l~~l~~-~g~~~~IvS~~~~~~i~~il 104 (214)
T TIGR03333 76 REFVAFINE-HGIPFYVISGGMDFFVYPLL 104 (214)
T ss_pred HHHHHHHHH-CCCeEEEECCCcHHHHHHHH
Confidence 444555533 47889999988666555544
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.61 E-value=0.71 Score=47.62 Aligned_cols=15 Identities=33% Similarity=0.538 Sum_probs=12.9
Q ss_pred ceEEEEecccccccC
Q psy2719 543 KLSLILDYDGTLTPL 557 (808)
Q Consensus 543 ~rli~~D~DGTLl~~ 557 (808)
.+.|+||+||||++.
T Consensus 4 ~~~iiFDlDGTL~Ds 18 (220)
T COG0546 4 IKAILFDLDGTLVDS 18 (220)
T ss_pred CCEEEEeCCCccccC
Confidence 468999999999983
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=84.54 E-value=12 Score=42.08 Aligned_cols=73 Identities=15% Similarity=0.209 Sum_probs=48.5
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCC----cccc---CceEEECCC--C
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGA----GGMM---HEALLVNPY--E 460 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~----~~~l---~~~llvnP~--d 460 (808)
+.+.++++..+ ++..||++| ..-|+ -+..|++++++| +|+--..+- +..+ +.|+.+++. +
T Consensus 290 v~~~~~~p~~~---ll~~~d~~I---~hgG~-~t~~eal~~GvP----~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~ 358 (401)
T cd03784 290 VRVVDFVPHDW---LLPRCAAVV---HHGGA-GTTAAALRAGVP----QLVVPFFGDQPFWAARVAELGAGPALDPRELT 358 (401)
T ss_pred eEEeCCCCHHH---Hhhhhheee---ecCCc-hhHHHHHHcCCC----EEeeCCCCCcHHHHHHHHHCCCCCCCCcccCC
Confidence 34567777654 588899999 34554 678999999764 444443331 1111 226666655 6
Q ss_pred HHHHHHHHHHHhC
Q psy2719 461 IDAAANVLHRALC 473 (808)
Q Consensus 461 ~~~lA~ai~~~L~ 473 (808)
.+++++++.++|+
T Consensus 359 ~~~l~~al~~~l~ 371 (401)
T cd03784 359 AERLAAALRRLLD 371 (401)
T ss_pred HHHHHHHHHHHhC
Confidence 8999999999997
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=83.97 E-value=1 Score=46.17 Aligned_cols=16 Identities=31% Similarity=0.405 Sum_probs=13.3
Q ss_pred CceEEEEecccccccC
Q psy2719 542 CKLSLILDYDGTLTPL 557 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~ 557 (808)
.+++++||+||||++.
T Consensus 13 ~~k~iiFD~DGTL~~~ 28 (219)
T TIGR00338 13 SKKLVVFDMDSTLINA 28 (219)
T ss_pred cCCEEEEeCcccCCCc
Confidence 3568999999999983
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=83.60 E-value=1.3 Score=43.82 Aligned_cols=14 Identities=36% Similarity=0.392 Sum_probs=11.8
Q ss_pred eEEEEecccccccC
Q psy2719 544 LSLILDYDGTLTPL 557 (808)
Q Consensus 544 rli~~D~DGTLl~~ 557 (808)
+||+||+|+||.+.
T Consensus 4 klvvFDLD~TlW~~ 17 (169)
T PF12689_consen 4 KLVVFDLDYTLWPP 17 (169)
T ss_dssp SEEEE-STTTSSSS
T ss_pred cEEEEcCcCCCCch
Confidence 69999999999985
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=82.98 E-value=5.4 Score=44.11 Aligned_cols=139 Identities=12% Similarity=0.094 Sum_probs=76.7
Q ss_pred cCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHH
Q psy2719 323 TKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELA 402 (808)
Q Consensus 323 ~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~ 402 (808)
..-++-.++|++++.+++|+++ +++-..+ +.|+.++.+... .-. . ....++ ...+..
T Consensus 203 ~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~~~~---~~~-----~--~~~~~~----~~~~~~ 259 (381)
T COG0763 203 RRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEEALK---WEV-----A--GLSLIL----IDGEKR 259 (381)
T ss_pred HHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHHHhh---ccc-----c--CceEEe----cCchHH
Confidence 4456777889999998999985 4432221 233333322111 100 0 011222 334566
Q ss_pred HHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCC-----------------CCccccCceEEEC-----CCC
Q psy2719 403 ALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFA-----------------GAGGMMHEALLVN-----PYE 460 (808)
Q Consensus 403 aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~-----------------G~~~~l~~~llvn-----P~d 460 (808)
..+.+||+.+..| |.+.+|++.+++| .|++=-. +....+-+-.+|+ -.-
T Consensus 260 ~a~~~aD~al~aS-----GT~tLE~aL~g~P----~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~ 330 (381)
T COG0763 260 KAFAAADAALAAS-----GTATLEAALAGTP----MVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCT 330 (381)
T ss_pred HHHHHhhHHHHhc-----cHHHHHHHHhCCC----EEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcC
Confidence 7899999999999 8999999999765 3333222 2222221212221 123
Q ss_pred HHHHHHHHHHHhCCCH--HHHHHHHHHHhHHHhcC
Q psy2719 461 IDAAANVLHRALCMPR--DERELRMSQLRHREQQL 493 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~~--~e~~~r~~~~~~~v~~~ 493 (808)
++.+|+++..++..+. ++..+..+.+++++.+.
T Consensus 331 pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~ 365 (381)
T COG0763 331 PENLARALEELLLNGDRREALKEKFRELHQYLRED 365 (381)
T ss_pred HHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCC
Confidence 6789999998887652 12233344455555554
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=82.39 E-value=4.5 Score=48.75 Aligned_cols=53 Identities=15% Similarity=0.156 Sum_probs=40.9
Q ss_pred EeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccC
Q psy2719 738 AKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSN 804 (808)
Q Consensus 738 v~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~ 804 (808)
+.|. +|...++.+.++ | ..|+++| |.++++.++ .| ++|++ .+..|++|++++-
T Consensus 492 ~~Pe---dK~~~v~~lq~~--g------~~VamvGDG~NDapAL~~Ad-vG--iAm~~gt~~akeaadivLl 549 (675)
T TIGR01497 492 ATPE---DKIALIRQEQAE--G------KLVAMTGDGTNDAPALAQAD-VG--VAMNSGTQAAKEAANMVDL 549 (675)
T ss_pred CCHH---HHHHHHHHHHHc--C------CeEEEECCCcchHHHHHhCC-Ee--EEeCCCCHHHHHhCCEEEC
Confidence 4554 799998887553 2 1589999 999999994 44 99985 6778999999865
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=81.88 E-value=6.3 Score=50.56 Aligned_cols=56 Identities=5% Similarity=0.120 Sum_probs=40.7
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCC--ccccccccccCc
Q psy2719 737 EAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSP--TVKSSWKQGSNH 805 (808)
Q Consensus 737 Ev~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~--~vk~~A~~~~~~ 805 (808)
.+.|. .|+.-|+.+-+. .| .-|+++| |..|++.|. .| |.+.+.+ ..+.+|||++.+
T Consensus 750 R~sP~---qK~~IV~~lk~~-~~------~~vl~iGDG~ND~~mlk~Ad-VG--Igi~g~eg~qA~~aaD~~i~~ 811 (1057)
T TIGR01652 750 RVSPS---QKADVVRLVKKS-TG------KTTLAIGDGANDVSMIQEAD-VG--VGISGKEGMQAVMASDFAIGQ 811 (1057)
T ss_pred CCCHH---HHHHHHHHHHhc-CC------CeEEEEeCCCccHHHHhhcC-ee--eEecChHHHHHHHhhhhhhhh
Confidence 46665 899999876442 23 1589999 999999996 66 5665544 478899998763
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.60 E-value=1.6 Score=43.51 Aligned_cols=38 Identities=24% Similarity=0.166 Sum_probs=25.9
Q ss_pred ceEEEEecccccccCCC-C---CCccCCCHHHHHHHHHHhcC
Q psy2719 543 KLSLILDYDGTLTPLTS-H---PDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~-~---~~~~~i~~~~~~~L~~L~~~ 580 (808)
.+++|+|-||||.-..+ . +++-...+.++++|.+|++.
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~ 46 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRA 46 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhC
Confidence 56899999999976433 1 12234556777888877765
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=80.84 E-value=2.2 Score=42.77 Aligned_cols=15 Identities=47% Similarity=0.636 Sum_probs=12.2
Q ss_pred ceEEEEecccccccC
Q psy2719 543 KLSLILDYDGTLTPL 557 (808)
Q Consensus 543 ~rli~~D~DGTLl~~ 557 (808)
.++++||+||||++.
T Consensus 4 ~k~viFD~DGTLid~ 18 (201)
T TIGR01491 4 IKLIIFDLDGTLTDV 18 (201)
T ss_pred ceEEEEeCCCCCcCC
Confidence 357899999999973
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >KOG3120|consensus | Back alignment and domain information |
|---|
Probab=80.46 E-value=2.9 Score=42.48 Aligned_cols=20 Identities=25% Similarity=0.481 Sum_probs=16.6
Q ss_pred CCceEEEEecccccccCCCC
Q psy2719 541 NCKLSLILDYDGTLTPLTSH 560 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~ 560 (808)
+.|.|++||+|-|+++..++
T Consensus 11 ~~ril~~FDFD~TIid~dSD 30 (256)
T KOG3120|consen 11 SPRILLVFDFDRTIIDQDSD 30 (256)
T ss_pred CCcEEEEEecCceeecCCcc
Confidence 46789999999999986553
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 808 | ||||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 1e-57 | ||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 2e-57 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 9e-56 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 6e-05 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 6e-05 |
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 808 | |||
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 1e-170 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 2e-22 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 1e-154 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 3e-18 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 1e-42 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-14 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 1e-08 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 7e-08 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 2e-06 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 2e-05 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 2e-05 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 1e-04 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 5e-04 |
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 500 bits (1289), Expect = e-170
Identities = 141/457 (30%), Positives = 205/457 (44%), Gaps = 65/457 (14%)
Query: 100 MNGVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYY 159
+ G G+W GWSG + N ++ + + + YY
Sbjct: 28 ILGALKAAGGLWFGWSGETGNEDQPLKKVKKGN----------ITWASFNLSEQDLDEYY 77
Query: 160 NGCCNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVV 219
N N WP FH D F W Y +VN A+ L +++D D
Sbjct: 78 NQFSNAVLWPAFHYRLDLVQFQRPAWDGYLRVNALLAD----KLLPLLQDDD-------- 125
Query: 220 PVVWIHDYQLLVAATTIRQV----------------------------------AYDFVG 245
++WIHDY LL A +R+ YD +G
Sbjct: 126 -IIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLG 184
Query: 246 FHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAP-- 303
F E+ L F+DC G+ + PIGI + + A
Sbjct: 185 FQTENDRLAFLDCLSNLTRVTTRSAKS-HTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPP 243
Query: 304 --ENLKDE--NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359
LK E N++ I V+RLDY+KGL R A+E LLEK+P++ K+ + QI+ SR D
Sbjct: 244 KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGD 303
Query: 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDG 419
V Y+ ++ +++ GRING++ + W+P+ Y+ ++ L ++R S + LVTPLRDG
Sbjct: 304 VQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDG 363
Query: 420 MNLVAKEYVACQIRE-PGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDE 478
MNLVAKEYVA Q PGVL+LS FAGA + AL+VNPY+ D A L RAL M E
Sbjct: 364 MNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAE 423
Query: 479 RELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDS 515
R R +++ + D+NHW F+S + +
Sbjct: 424 RISRHAEMLDVIVKNDINHWQECFISDLKQIVPRSAE 460
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-22
Identities = 22/94 (23%), Positives = 31/94 (32%), Gaps = 10/94 (10%)
Query: 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDK 60
AGGL + + G+W GWSG + N ++ +
Sbjct: 21 AGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGN----------ITWASFNLSE 70
Query: 61 DEFEAYYNGCCNGTFWPLFHSMPDRAVFNAETWK 94
+ + YYN N WP FH D F W
Sbjct: 71 QDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWD 104
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 459 bits (1182), Expect = e-154
Identities = 80/463 (17%), Positives = 142/463 (30%), Gaps = 68/463 (14%)
Query: 100 MNGVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPT-SGLTSSQVIPVHVDKDEFEAY 158
+ + WI + D +P+ V + D F
Sbjct: 38 VAEQAGVLNISWIASADS---EDDRRASALNPDGVTMELHSGREILVRLIRHDPAVFRNV 94
Query: 159 YNGCCNGTFWPLFHSMPDRAV------FNAETWKTYCKVNEEFANCTLNALRNVIKDLDA 212
N W + DR E W + + +FA+ L +
Sbjct: 95 QNFMTANLMWAANNYGWDRWTQPSFGSDAREGWADFGRFTRDFADAILKSSAQSADP--- 151
Query: 213 AGKTNVVPVVWIHDYQLLVAATTIRQV--------------------------------- 239
V +HDYQL+ +R+
Sbjct: 152 --------VYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILH 203
Query: 240 ---AYDFVGFHIEDYCLNFIDCCCRRLG-SRVDRNNMLVELAGRTVHVKALPIGIPFERF 295
+GF + +C NF++ L +R+DR M VE G ++ +P+G
Sbjct: 204 GMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTL 263
Query: 296 VQLAENAPENLKD--ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQIS 353
PE +++ + ++++ R D K ++AF +L +EK L
Sbjct: 264 DGRNPQLPEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF--VLAARGGGLEKTRMLVRM 321
Query: 354 VPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALV 413
P+R V ++ V N S I A +R + + +
Sbjct: 322 NPNRLYVPANADYVHRVETAVAEANAELG----SDTVRIDNDNDVNHTIACFRRADLLIF 377
Query: 414 TPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHE-ALLVNPYEIDAAANVLHRAL 472
DG NL E +ILS GA ++ E VNP+++ A + AL
Sbjct: 378 NSTVDGQNLSTFEAPLVN-ERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAAL 436
Query: 473 CMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDS 515
+R ++ R + + W+ + L + A +
Sbjct: 437 AAGPRQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHAARTA 479
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 3e-18
Identities = 17/101 (16%), Positives = 22/101 (21%), Gaps = 10/101 (9%)
Query: 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPT-SGLTSSQVIPVHVD 59
GG VA WI + D +P+ V + D
Sbjct: 31 PGGTGNVVAEQAGVLNISWIASADS---EDDRRASALNPDGVTMELHSGREILVRLIRHD 87
Query: 60 KDEFEAYYNGCCNGTFWPLFHSMPDRAV------FNAETWK 94
F N W + DR E W
Sbjct: 88 PAVFRNVQNFMTANLMWAANNYGWDRWTQPSFGSDAREGWA 128
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 1e-42
Identities = 43/254 (16%), Positives = 80/254 (31%), Gaps = 59/254 (23%)
Query: 546 LILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVM 605
+ LDYDGTL P+ +P+ + ++ L D
Sbjct: 4 IFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDT---------------------- 41
Query: 606 SEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVHP 665
I++GR+ E + + + ++ + HG +G +
Sbjct: 42 -------------------YIVTGRSPEEISRFLPLD-INMICYHGACS-KINGQIVYNN 80
Query: 666 VPKEYAEKLRQLIKALQDEV-CHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIFLE 724
+ ++ + + V G I K + + +H + + + R +I
Sbjct: 81 GSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARI 140
Query: 725 AGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAGN----EDAMLAL 780
G E + M IE + P ++G A + I AG+ E A A
Sbjct: 141 FGVETYYGKMIIELRVP-GVNKGSAIRSVR---------GERPAIIAGDDATDEAAFEAN 190
Query: 781 QGIACTFRVDSSPT 794
A T +V T
Sbjct: 191 DD-ALTIKVGEGET 203
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 77.2 bits (189), Expect = 1e-14
Identities = 93/542 (17%), Positives = 177/542 (32%), Gaps = 135/542 (24%)
Query: 298 LAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357
L+ + + + K D D K ++ + + + ++ + V L ++ S+
Sbjct: 22 LSVFEDAFVDNFDCK-----DVQDMPKSILSK-EEIDHIIMS-KDAVSGTLRLFWTLLSK 74
Query: 358 TDVLEYKALKDEMDQ----LVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALV 413
+ + K +++ + L+ I +P+ YI E+ LY D+ +
Sbjct: 75 QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI------EQRDRLYNDNQV--F 126
Query: 414 TPL---RDGMNLVAKEYVACQIR-EPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVL- 468
R L ++ ++R VLI G G + A +V
Sbjct: 127 AKYNVSRLQPYLKLRQ-ALLELRPAKNVLI----DGVLGSGKTWV---------ALDVCL 172
Query: 469 -HRALC-MP----------RDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDNDDDSD 516
++ C M + E + L+ Q+D N S SS L
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 517 PLS--------AKTLQLTLDD-FDLYLNNYVDGNCKLSLILDYDGTLT-----PLTSHPD 562
L L L L + + N + +CK+ L+ +T T+H
Sbjct: 233 ELRRLLKSKPYENCL-LVLLNVQNAKAWNAFNLSCKI-LLTTRFKQVTDFLSAATTTHIS 290
Query: 563 LAVMS-----EETKRVLERLANMPDVNIGIISGRTL--ENLRHHPDLAVMSEETKRVLER 615
L S +E K +L + + + L E L +P + + E
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRP--------QDLPREVLTTNP-RRL-----SIIAES 336
Query: 616 LANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTK------FVHP---- 665
+ + T +N K VN +K+T L +L P + V P
Sbjct: 337 IRDGLA---------TWDNW-KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386
Query: 666 VPKEYAEKL-RQLIKALQDEV---CHDGAWIE--NKGVLLTFH--YRETPIERREY---- 713
+P + +IK+ V H + +E K ++ Y E ++
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446
Query: 714 --IIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERV---RI 768
I+D + + F+ + P DQ S HI + ++ ER+ R+
Sbjct: 447 RSIVDHYN---IPKTFDSDD-------LIPPYLDQYFYS-HIGHHLKNIEHPERMTLFRM 495
Query: 769 IY 770
++
Sbjct: 496 VF 497
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 57.1 bits (137), Expect = 1e-08
Identities = 23/236 (9%), Positives = 60/236 (25%), Gaps = 40/236 (16%)
Query: 271 NMLVELAGRTVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHR- 329
I N K + K+IL R +
Sbjct: 207 QYFNNKGYNFTDEYFFQPKINTTLK------NYINDKRQKEKIILVYGRPSVKRNAFTLI 260
Query: 330 IKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPI 389
++A + ++K+ E + VG + + +
Sbjct: 261 VEALKIFVQKYDRSNE-WKII----------------------SVGEKHKDIALGKGIHL 297
Query: 390 RYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGM 449
G + E+ A L + S+I + + + E G+ +++ +
Sbjct: 298 NS-LGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHF-----GLRVITNKYENKDL 351
Query: 450 M---HEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSF 502
+ + + A L + R++ + + ++ + +
Sbjct: 352 SNWHSNIVSLEQLNPENIAETLVELCMSF-NNRDVDKKESSNMMFYINEFNEFSFI 406
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 7e-08
Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 37/220 (16%)
Query: 219 VPVVW-IHDYQLLVAATTIRQVAYDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELA 277
P +W H + ++ + ++F+ +E Y +I + +DRN ++
Sbjct: 148 SPWLWRCH-----IDLSSPNREFWEFLRRFVEKYDR-YIFHLPEYVQPELDRNKAVI--- 198
Query: 278 GRTVHVKALPIGIPFERFVQLAENAPENLK-------DENLKVILGVDRLDYTKGLVHRI 330
+P I + E L+ D +I V R D KG+ I
Sbjct: 199 --------MPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVI 250
Query: 331 KAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIR 390
+ + ++ EK P V L + V + D + + + ++ + +
Sbjct: 251 EIYRKVKEKIPG----VQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKV--------L 298
Query: 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVAC 430
+ E+ A R S + L +R+G L E +
Sbjct: 299 TNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWK 338
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 52/216 (24%), Positives = 79/216 (36%), Gaps = 44/216 (20%)
Query: 281 VHVKALPIGIPFERFVQLAENAPENLK-----DENLKVILGVDRLDYTKGLVHRIKAFER 335
+ V + G E + + A E + + KV+ V RL KG IKA
Sbjct: 210 ISV--VSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAA 267
Query: 336 LLEKHPEYVEKVTFLQISVPSRTDVL--EYKALKDEMDQLVGRINGRFSKPNWSPIRYIF 393
L ++ P+ + + PS + Y+ + +E+ + RI RF P
Sbjct: 268 LFDRDPD--RNLRVIICGGPSGPNATPDTYRHMAEELG-VEKRI--RFLDP--------- 313
Query: 394 GCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMHEA 453
EL A+YR + I V + LVA E A P + A G + A
Sbjct: 314 --RPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGT--PVI------AARVGGLPIA 363
Query: 454 -------LLVNPYEIDAAANVLHRALCMPRDERELR 482
LLV+ + A A+ L L D+ E R
Sbjct: 364 VAEGETGLLVDGHSPHAWADALATLL----DDDETR 395
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 35/190 (18%), Positives = 63/190 (33%), Gaps = 27/190 (14%)
Query: 308 DENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALK 367
L I+ RLD K ++A+ + E + +T I P + K
Sbjct: 259 RMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEK 318
Query: 368 DEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSA----IALVTPLRDGMNLV 423
+ + +++ I+ + +F Q+ELA Y A + +T + L
Sbjct: 319 EILGKIIELIDNN----DCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLA 374
Query: 424 AKEYVACQIREPGVLILSP-FAGAGGMMHEA-------LLVNPYEIDAAANVLHRALCMP 475
E +A G+ P G E +LV+P + + A L +A
Sbjct: 375 PVEAMAS-----GL----PAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESE 425
Query: 476 RDERELRMSQ 485
E +
Sbjct: 426 --ETWSAYQE 433
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 46.9 bits (111), Expect = 2e-05
Identities = 39/196 (19%), Positives = 70/196 (35%), Gaps = 35/196 (17%)
Query: 306 LKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS--RTDVLEY 363
LKD+ ++ + RLD K L ++ + + V S + E
Sbjct: 567 LKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEM 626
Query: 364 KALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYR---DSAIALVTP-LRDG 419
K + D +++ ++NG+ R+I + + LYR D+ A V P L +
Sbjct: 627 KKMYDLIEEY--KLNGQ--------FRWISSQMDRVRNGELYRYICDTKGAFVQPALYEA 676
Query: 420 MNLVAKEYVACQIREPGVLILSPFAGA--GGMM------HEALLVNPYEIDAAANVLHRA 471
L E + C G+ P GG ++PY D AA+ L
Sbjct: 677 FGLTVVEAMTC-----GL----PTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADF 727
Query: 472 LCMPRDERELR--MSQ 485
+++ +S+
Sbjct: 728 FTKCKEDPSHWDEISK 743
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 44/248 (17%), Positives = 76/248 (30%), Gaps = 60/248 (24%)
Query: 261 RRLGSRVDRN--------NMLVELAGRTVHVKALPIGIPFERFVQLAENAPENLK----- 307
R++G+ VD G + LP G+ +RF +
Sbjct: 135 RKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGF 194
Query: 308 DENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALK 367
+ VI RL KG IKA +++ P+ L + L A
Sbjct: 195 TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPD----AQLLIVGSGRYESTLRRLA-- 248
Query: 368 DEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRD-------GM 420
+ + +F G + +++ + I + G+
Sbjct: 249 ---TDVSQNV--KF-----------LGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGL 292
Query: 421 NLVAKEYVACQIREPGVLILSPFAGAGGMMHEA------LLVNPYEIDAAANVLHRALCM 474
+V E AC GV ++ AG G E L+V ++D + +L L
Sbjct: 293 GIVYLEAQAC-----GVPVI---AGTSGGAPETVTPATGLVVEGSDVDKLSELLIELL-- 342
Query: 475 PRDERELR 482
D+ R
Sbjct: 343 --DDPIRR 348
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 17/128 (13%), Positives = 42/128 (32%), Gaps = 17/128 (13%)
Query: 219 VPVVW-IHDYQLLVAATTIRQVAYDFVGFHIEDYCLNFIDC--CCRRLGSRVDRNNMLVE 275
+ +V +H T I + D ++ + + D S N E
Sbjct: 126 IKIVTTLH-------GTDITVLGSDPSLNNLIRFGIEQSDVVTAV----SHSLIN-ETHE 173
Query: 276 LAGRTVHVKALPIGIPFERFVQLAENAP--ENLKDENLKVILGVDRLDYTKGLVHRIKAF 333
L ++ + I + + E E+ K+++ + K + ++AF
Sbjct: 174 LVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYGISESEKILIHISNFRKVKRVQDVVQAF 233
Query: 334 ERLLEKHP 341
+++ +
Sbjct: 234 AKIVTEVD 241
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 808 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.92 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.92 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.9 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.9 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.89 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.89 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.89 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.88 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.88 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.88 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.87 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.87 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.87 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.87 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.87 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.87 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.87 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.86 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.86 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.86 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.86 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.86 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.85 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.85 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.85 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.85 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.85 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.84 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.84 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.84 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.84 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.82 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.82 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.82 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.81 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.8 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.8 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.8 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.79 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.78 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.77 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.75 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.75 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.69 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.67 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.66 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.65 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.65 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.58 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.54 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.53 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.51 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.44 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.35 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.06 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.05 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 98.98 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.89 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 98.82 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.8 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 98.74 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 98.68 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.6 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 98.57 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.56 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 98.51 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.5 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.47 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.46 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 98.45 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.39 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.39 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.38 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.37 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.28 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.27 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.26 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.23 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.12 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.06 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.03 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.03 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.02 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 98.0 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 97.99 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 97.98 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 97.97 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.94 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 97.85 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.82 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.76 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.7 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 97.68 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.67 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 97.63 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 97.62 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 97.61 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.57 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 97.53 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 97.51 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.39 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.33 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 97.27 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 97.23 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.2 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.18 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 97.15 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.11 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.04 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.03 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 97.02 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.01 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.0 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 96.97 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 96.96 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 96.93 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 96.89 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 96.88 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 96.84 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 96.84 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 96.58 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.53 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 96.52 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 96.4 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 96.33 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 96.33 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 96.32 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.25 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 96.23 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 96.2 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 96.1 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 96.06 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 95.35 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.29 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 95.26 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.2 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 95.04 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 94.98 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 94.88 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 94.63 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 94.61 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 94.57 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 94.56 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 94.47 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 94.41 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 94.19 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 93.76 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 93.64 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 93.6 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 93.57 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 93.37 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 92.37 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 92.01 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 91.96 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 91.84 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 91.68 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 91.61 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 91.22 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 90.92 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 90.83 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 90.81 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 90.59 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 90.03 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 89.96 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 89.89 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 89.8 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 89.54 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 89.45 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 89.34 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 89.26 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 89.05 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 89.04 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 88.96 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 88.15 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 87.74 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 87.64 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 86.76 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 85.46 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 85.37 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 85.31 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 84.5 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 83.99 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 83.81 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 83.47 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 83.39 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 83.36 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 83.17 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 82.55 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 82.12 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 81.97 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 81.97 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 81.71 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 81.48 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 81.27 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 81.05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 80.37 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 80.1 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-80 Score=699.53 Aligned_cols=382 Identities=20% Similarity=0.284 Sum_probs=329.2
Q ss_pred ceeeeecCCCcCCCCCCCCCCCCCCCCC-CCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCc---c---cc
Q psy2719 108 TGIWIGWSGLYDLAPDEVIPEADPNDQA-PTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDR---A---VF 180 (808)
Q Consensus 108 ~~~wigw~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~---~---~~ 180 (808)
+|+||||+|...... ..++.+.... ......+++|+||+|+++++++||+||||++|||+|||+++. + .|
T Consensus 46 ~~~Wvgw~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~~~~ 122 (496)
T 3t5t_A 46 NISWIASADSEDDRR---ASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSFGSD 122 (496)
T ss_dssp TCCEEEECCSHHHHH---HHHHCTTCEEEECTTSCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCBCHH
T ss_pred CCEEEecCCCccchh---hhhccccccccccccCCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCCCccchh
Confidence 799999998642110 0000000000 011345689999999999999999999999999999998542 2 34
Q ss_pred CHHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc--------------------
Q psy2719 181 NAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA-------------------- 240 (808)
Q Consensus 181 ~~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~-------------------- 240 (808)
+.++|++|++||++||++|++.+++ .++|+|||||||||++|+|||+++
T Consensus 123 ~~~~w~~Y~~vN~~fA~~i~~~~~~-----------~~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~ 191 (496)
T 3t5t_A 123 AREGWADFGRFTRDFADAILKSSAQ-----------SADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWR 191 (496)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTT-----------CSSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcc-----------CCCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHh
Confidence 4689999999999999999998741 148999999999999999999865
Q ss_pred ----------------CCEEEeccHHHHHHHHHHHHHHh-CceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcCc-
Q psy2719 241 ----------------YDFVGFHIEDYCLNFIDCCCRRL-GSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENA- 302 (808)
Q Consensus 241 ----------------~dligf~~~~~~~~fl~~~~~~l-~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~- 302 (808)
||+||||+++|++||+++|++++ +.+.+...-.++++|+.++|.++|+|||++.|.+.....
T Consensus 192 ~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~ 271 (496)
T 3t5t_A 192 ILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLP 271 (496)
T ss_dssp TSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCC
T ss_pred hCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHH
Confidence 89999999999999999999999 877654333689999999999999999999998764321
Q ss_pred hhhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccC
Q psy2719 303 PENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRF 381 (808)
Q Consensus 303 ~~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~ 381 (808)
.+++++ .++++|++|||+++.||+..+|+|| +|++++|+++ +++|+|||.|+++++++|+++++++++++++||++|
T Consensus 272 ~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~ 349 (496)
T 3t5t_A 272 EGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAEL 349 (496)
T ss_dssp TTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCceEEEEcccCccccCHHHHHHHH-HHHHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhcccc
Confidence 233434 7899999999999999999999999 9999999999 999999999999999999999999999999999999
Q ss_pred CCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC-ceEEECCCC
Q psy2719 382 SKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-EALLVNPYE 460 (808)
Q Consensus 382 g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-~~llvnP~d 460 (808)
|+. +|+++ +.++.++++++|++|||||+||++||||||++|||||+ +.+||+|+|+++|++++|. +|++|||+|
T Consensus 350 g~~---~V~f~-g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~-~~~g~lVlSe~aGa~~~l~~~allVnP~D 424 (496)
T 3t5t_A 350 GSD---TVRID-NDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVN-ERDADVILSETCGAAEVLGEYCRSVNPFD 424 (496)
T ss_dssp CTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHC-SSCCEEEEETTBTTHHHHGGGSEEECTTB
T ss_pred CCc---CEEEe-CCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhC-CCCCCEEEeCCCCCHHHhCCCEEEECCCC
Confidence 875 77765 68899999999999999999999999999999999996 3579999999999999995 799999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHccc
Q psy2719 461 IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALD 510 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 510 (808)
++++|+||.++|+|+++||++|+++++++|.+||+.+|+++||++|....
T Consensus 425 ~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~ 474 (496)
T 3t5t_A 425 LVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEAWVQAQLDGLAADH 474 (496)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999998763
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-72 Score=640.63 Aligned_cols=383 Identities=36% Similarity=0.628 Sum_probs=341.7
Q ss_pred cccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCccccCH
Q psy2719 103 VTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVFNA 182 (808)
Q Consensus 103 ~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~ 182 (808)
+.++.+|+||||+|..+. +.+ . .......+++|+||||+++++++||+||||++|||+|||.++...|+.
T Consensus 31 ~~~~~~~~wvgw~g~~~~-------~~~--~-~~~~~~~~~~~~~v~l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~ 100 (482)
T 1uqt_A 31 ALKAAGGLWFGWSGETGN-------EDQ--P-LKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQR 100 (482)
T ss_dssp HHHHHCEEEEEEEEEESC-------CSS--C-CEEEEETTEEEEEEEECHHHHHHHTTTHHHHTHHHHHTTCGGGCCCCH
T ss_pred HHhhCCCEEEeCCCCCCc-------ccc--h-hhhhccCCceEEEEECCHHHHHHHHHHhhhhhccccccCcCCccccCH
Confidence 345678999999997421 011 0 111223568999999999999999999999999999999998889999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc----------------------
Q psy2719 183 ETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA---------------------- 240 (808)
Q Consensus 183 ~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~---------------------- 240 (808)
++|.+|++||+.||++|.+.++ ++|+|||||||++++|.++|++.
T Consensus 101 ~~w~~y~~vN~~fa~~l~~~~~-------------~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~pfp~~~~~~~l 167 (482)
T 1uqt_A 101 PAWDGYLRVNALLADKLLPLLQ-------------DDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNAL 167 (482)
T ss_dssp HHHHHHHHHHHHHHHHHGGGCC-------------TTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-------------CCCEEEEECchHHHHHHHHHHhCCCCcEEEEEcCCCCCHHHHhhC
Confidence 9999999999999999987654 38999999999999999998753
Q ss_pred ------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcC-----ch
Q psy2719 241 ------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAEN-----AP 303 (808)
Q Consensus 241 ------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~-----~~ 303 (808)
+|++|||+..|+++|+++|+++++.+....+ .+.+.|+..+|.++|+|||++.|.+.... ..
T Consensus 168 p~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~-~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~ 246 (482)
T 1uqt_A 168 PTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK-SHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLA 246 (482)
T ss_dssp TTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT-EEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHH
T ss_pred ccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCC-eEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHH
Confidence 5899999999999999999999987665444 37788999999999999999999764321 12
Q ss_pred hhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCC
Q psy2719 304 ENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFS 382 (808)
Q Consensus 304 ~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g 382 (808)
.++++ .++++|++|||+++.||++.+|+||++|++++|+++++++|+|+|.|+++++++|+++++++++++++||.+||
T Consensus 247 ~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g 326 (482)
T 1uqt_A 247 QLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYG 326 (482)
T ss_dssp HHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcc
Confidence 33333 67899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCC-CceEEEcCCCCCccccCceEEECCCCH
Q psy2719 383 KPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIRE-PGVLILSPFAGAGGMMHEALLVNPYEI 461 (808)
Q Consensus 383 ~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~-~g~vVlS~~~G~~~~l~~~llvnP~d~ 461 (808)
+.+|.||+++.|.++++++.++|++|||||+||++||||||++|||||+.++ +||||+|+++|+++++.+|++|||+|+
T Consensus 327 ~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~~g~lv~p~d~ 406 (482)
T 1uqt_A 327 QLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDR 406 (482)
T ss_dssp BTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCTTSEEECTTCH
T ss_pred cCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhCCeEEECCCCH
Confidence 9999999999999999999999999999999999999999999999998643 589999999999999989999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 462 DAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 462 ~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
+++|++|.++|+|++++|+++++++++++.++|+..|+++|++.|+++
T Consensus 407 ~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 407 DEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999886
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=227.10 Aligned_cols=199 Identities=20% Similarity=0.235 Sum_probs=149.8
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
++||+|+||||++...+|+...++++++++|++|+++ | .
T Consensus 2 kli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~----------------------------------------g-~ 40 (239)
T 1u02_A 2 SLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKER----------------------------------------F-D 40 (239)
T ss_dssp CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHH----------------------------------------S-E
T ss_pred eEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcC----------------------------------------C-C
Confidence 5899999999998654444568999999999999988 8 9
Q ss_pred EEEEeCCChhhHHHhcCccceEEEcccceeEecCCCcee------ecCCChhHHHHHHHHHHHHHhhccCCCcEEEecCc
Q psy2719 624 IGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKF------VHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGV 697 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~------~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~ 697 (808)
|+|+|||++..+.+++... +++|++||++++..++..+ ..+++. +.++++++.+.+ .++.+++.++.
T Consensus 41 v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~---~~~~~i~~~~~~---~~~~~~~~~~~ 113 (239)
T 1u02_A 41 TYIVTGRSPEEISRFLPLD-INMICYHGACSKINGQIVYNNGSDRFLGVFD---RIYEDTRSWVSD---FPGLRIYRKNL 113 (239)
T ss_dssp EEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEETTEEEECTTGGGGHHHHH---HHHHHHTTHHHH---STTCEEEEETT
T ss_pred EEEEeCCCHHHHHHHhccc-hheEEECCEEEeeCCeeeecccccccchhhH---HHHHHHHHHHhh---CCCcEEEecCC
Confidence 9999999999999998755 7899999999987332211 122222 345566666554 45778888888
Q ss_pred EEEEEcCcCChhhHHHHHHHHHHHHHh-cCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----
Q psy2719 698 LLTFHYRETPIERREYIIDRASQIFLE-AGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG---- 772 (808)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G---- 772 (808)
.+.++|+..++. ..+..+.+.+.+.. .++.+.++..++||+|+ ++|||.||++|+++ +| ++|||
T Consensus 114 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~-~~~Kg~al~~l~~~-~g--------via~GD~~N 182 (239)
T 1u02_A 114 AVLYHLGLMGAD-MKPKLRSRIEEIARIFGVETYYGKMIIELRVP-GVNKGSAIRSVRGE-RP--------AIIAGDDAT 182 (239)
T ss_dssp EEEEECTTSCST-THHHHHHHHHHHHHHHTCEEEECSSEEEEECT-TCCHHHHHHHHHTT-SC--------EEEEESSHH
T ss_pred EEEEEcCCCChh-HHHHHHHHHHHHhccCCcEEEeCCcEEEEEcC-CCCHHHHHHHHHhh-CC--------eEEEeCCCc
Confidence 888888765431 11222333332222 25667788899999998 99999999999986 54 79999
Q ss_pred CHHHHHhccCCccEEEeCCCCccccccccccCc
Q psy2719 773 NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNH 805 (808)
Q Consensus 773 D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~ 805 (808)
|++||+.+.. |++|||+|+ |+.|+|++++
T Consensus 183 D~~Ml~~a~~-g~~vam~Na---~~~A~~v~~~ 211 (239)
T 1u02_A 183 DEAAFEANDD-ALTIKVGEG---ETHAKFHVAD 211 (239)
T ss_dssp HHHHHHTTTT-SEEEEESSS---CCCCSEEESS
T ss_pred cHHHHHHhhC-CcEEEECCC---CCcceEEeCC
Confidence 9999999832 466999997 6899999876
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-24 Score=240.95 Aligned_cols=271 Identities=17% Similarity=0.137 Sum_probs=197.9
Q ss_pred CCCEEEEeccchHHHHHHHHhhc-C-CEEEeccH------------------------HHHHHHHHHHHHHhCc-eeecC
Q psy2719 218 VVPVVWIHDYQLLVAATTIRQVA-Y-DFVGFHIE------------------------DYCLNFIDCCCRRLGS-RVDRN 270 (808)
Q Consensus 218 ~~dvvwihDyhl~llp~~lr~~~-~-dligf~~~------------------------~~~~~fl~~~~~~l~~-~~~~~ 270 (808)
..|+|++|+++..+++.++++.. . -++.+|.. ...+..+..++.++.. +...+
T Consensus 122 ~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~ 201 (439)
T 3fro_A 122 LPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLI 201 (439)
T ss_dssp CCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHH
T ss_pred CCeEEEecchhhhhhHHHHhhccCCCEEEEecccccccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHH
Confidence 48999999999988888776433 1 12233322 2233333333333321 11110
Q ss_pred CeEEEEcCeEEEEEEeecCcCccccchhhc------Cchhhhhc---CCCeEEEEEcCcc-ccCChHHHHHHHHHHHHhC
Q psy2719 271 NMLVELAGRTVHVKALPIGIPFERFVQLAE------NAPENLKD---ENLKVILGVDRLD-YTKGLVHRIKAFERLLEKH 340 (808)
Q Consensus 271 ~~~i~~~gr~~~v~v~p~GID~~~f~~~~~------~~~~~~~~---~~~~iil~V~Rl~-~~KGi~~~l~A~~~ll~~~ 340 (808)
...-.+.....++.++|+|||.+.|.+... ....++++ .+.++|+++||+. +.||++.+++|++++.+++
T Consensus 202 ~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~ 281 (439)
T 3fro_A 202 DEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKK 281 (439)
T ss_dssp HTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSG
T ss_pred HHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcc
Confidence 000000123467889999999999976521 11122322 3349999999999 9999999999999998865
Q ss_pred --CCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCC
Q psy2719 341 --PEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRD 418 (808)
Q Consensus 341 --p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~E 418 (808)
|+ +.|+++|.+. ..+.+++++++.+.+ .++++.|.++.+++..+|+.||++|+||.+|
T Consensus 282 ~~~~----~~l~i~G~g~-------~~~~~~l~~~~~~~~---------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e 341 (439)
T 3fro_A 282 EFQE----MRFIIIGKGD-------PELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFE 341 (439)
T ss_dssp GGGG----EEEEEECCCC-------HHHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECBSCC
T ss_pred cCCC----eEEEEEcCCC-------hhHHHHHHHHHhhcC---------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCC
Confidence 55 4588777432 134456666666543 3567889999999999999999999999999
Q ss_pred CCChhHHHHHHhccCCCceEEEcCCCCCccccC--ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHH
Q psy2719 419 GMNLVAKEYVACQIREPGVLILSPFAGAGGMMH--EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVN 496 (808)
Q Consensus 419 G~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~--~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~ 496 (808)
|||++++|||||+ .|+|+|+.+|..+.+. +|++++|.|++++|++|.++++++++.+.+..+++++.+++++++
T Consensus 342 ~~~~~~~EAma~G----~Pvi~s~~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~ 417 (439)
T 3fro_A 342 PFGLVALEAMCLG----AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWE 417 (439)
T ss_dssp SSCHHHHHHHHTT----CEEEEESSTHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHH
T ss_pred CccHHHHHHHHCC----CCeEEcCCCCcceeEEcCceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHH
Confidence 9999999999995 6799999988888873 599999999999999999999855566777777788888899999
Q ss_pred HHHHHHHHHHHccccc
Q psy2719 497 HWMNSFLSSMGALDND 512 (808)
Q Consensus 497 ~W~~~~l~~l~~~~~~ 512 (808)
..++++++.++++.++
T Consensus 418 ~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 418 KSAERYVKAYTGSIDR 433 (439)
T ss_dssp HHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999987544
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.1e-23 Score=219.03 Aligned_cols=206 Identities=15% Similarity=0.158 Sum_probs=147.8
Q ss_pred CCceEEEEecccccccCCCCCCcc-CCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCC
Q psy2719 541 NCKLSLILDYDGTLTPLTSHPDLA-VMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANM 619 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~~~~~-~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~ 619 (808)
...++|+||+||||++. .. .++++++++|++|+++
T Consensus 19 ~~~kli~~DlDGTLl~~-----~~~~i~~~~~~al~~l~~~--------------------------------------- 54 (283)
T 3dao_A 19 GMIKLIATDIDGTLVKD-----GSLLIDPEYMSVIDRLIDK--------------------------------------- 54 (283)
T ss_dssp CCCCEEEECCBTTTBST-----TCSCCCHHHHHHHHHHHHT---------------------------------------
T ss_pred cCceEEEEeCcCCCCCC-----CCCcCCHHHHHHHHHHHHC---------------------------------------
Confidence 45689999999999983 34 7999999999999987
Q ss_pred CCCeEEEEeCCChhhHHHhcCc--cceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhh--------ccCCC
Q psy2719 620 PDVNIGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDE--------VCHDG 689 (808)
Q Consensus 620 pg~~v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~--------~~~~g 689 (808)
|+.|+++|||+...+..++.. ...++|++||+.++..++..+..+++.+ .++++++.+.+. ....+
T Consensus 55 -G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~ 130 (283)
T 3dao_A 55 -GIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDED---IWKGMCRMVRDELPACDYFAATPDF 130 (283)
T ss_dssp -TCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHH---HHHHHHHHHHHHCTTCEEEEECSSC
T ss_pred -CCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHH---HHHHHHHHHHHhcCCceEEEEeCCe
Confidence 999999999999999888753 2358999999999986555666777765 455565555432 01122
Q ss_pred cEEEec-----------------------------CcEEEEEcCcCChhhHHHHHHHHHHHHHhcCee-EEccCeEEEEe
Q psy2719 690 AWIENK-----------------------------GVLLTFHYRETPIERREYIIDRASQIFLEAGFE-PHNALMAIEAK 739 (808)
Q Consensus 690 ~~ie~k-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~g~~~vEv~ 739 (808)
.++... ...+.+.. +++......+.+.+.+.. .+. +.++..++||.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~---~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~ 206 (283)
T 3dao_A 131 CFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFH---PDKCEELCTPVFIPAWNK-KAHLAAAGKEWVDCN 206 (283)
T ss_dssp EEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEEC---SSCHHHHHTTTHHHHHTT-TEEEEEETTTEEEEE
T ss_pred EEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEc---ChHHHHHHHHHHHHHhcC-CEEEEEecCceEEEe
Confidence 222110 01111110 011111122222222221 244 46788999999
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 740 PPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 740 p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
|+ ++|||.|++.++++ +|++.+ +++||| |++||+.++ ++|||+| .+++|+.|+|+++++
T Consensus 207 ~~-~~~K~~~l~~l~~~-lgi~~~---e~ia~GD~~NDi~ml~~ag---~~vam~na~~~~k~~A~~v~~s~ 270 (283)
T 3dao_A 207 AK-GVSKWTALSYLIDR-FDLLPD---EVCCFGDNLNDIEMLQNAG---ISYAVSNARQEVIAAAKHTCAPY 270 (283)
T ss_dssp ET-TCCHHHHHHHHHHH-TTCCGG---GEEEEECSGGGHHHHHHSS---EEEEETTSCHHHHHHSSEEECCG
T ss_pred eC-CCcHHHHHHHHHHH-hCCCHH---HEEEECCCHHHHHHHHhCC---CEEEcCCCCHHHHHhcCeECCCC
Confidence 98 99999999999997 899875 799999 999999994 5699997 689999999999876
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-23 Score=241.64 Aligned_cols=203 Identities=11% Similarity=0.116 Sum_probs=148.7
Q ss_pred eEEEEEEeecCcCccccchhhcCc------------------hhhhhc------CCCeEEEEEcCccccCChHHHHHHHH
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENA------------------PENLKD------ENLKVILGVDRLDYTKGLVHRIKAFE 334 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~------------------~~~~~~------~~~~iil~V~Rl~~~KGi~~~l~A~~ 334 (808)
+..++.+||||||++.|.|..... ..+++. ++.++|++|||+.+.||++.+++|++
T Consensus 271 ~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~ 350 (536)
T 3vue_A 271 RLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIP 350 (536)
T ss_dssp CCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHH
T ss_pred ccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHH
Confidence 456789999999999998742110 001111 46789999999999999999999999
Q ss_pred HHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEEC
Q psy2719 335 RLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVT 414 (808)
Q Consensus 335 ~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~ 414 (808)
+++++++ .|+++|.+ +.. ....++.+...++. .+ .+.+..+.+++..+|+.||+||+|
T Consensus 351 ~l~~~~~------~l~l~G~G---~~~----~~~~~~~~~~~~~~--------~v-~~~~~~~~~~~~~~~~~aD~~v~P 408 (536)
T 3vue_A 351 ELMQEDV------QIVLLGTG---KKK----FEKLLKSMEEKYPG--------KV-RAVVKFNAPLAHLIMAGADVLAVP 408 (536)
T ss_dssp HHTTSSC------EEEEECCB---CHH----HHHHHHHHHHHSTT--------TE-EEECSCCHHHHHHHHHHCSEEEEC
T ss_pred HhHhhCC------eEEEEecc---Cch----HHHHHHHHHhhcCC--------ce-EEEEeccHHHHHHHHHhhheeecc
Confidence 9976543 35555543 222 23333444444332 23 345678999999999999999999
Q ss_pred CCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceE----------EECCCCHHHHHHHHHHHhCCC-HHHHH
Q psy2719 415 PLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EAL----------LVNPYEIDAAANVLHRALCMP-RDERE 480 (808)
Q Consensus 415 S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~l----------lvnP~d~~~lA~ai~~~L~~~-~~e~~ 480 (808)
|.+||||++++|||||+ .|+|+|+.+|..+.+. +|+ +|+|.|++++|++|.++|..- .++++
T Consensus 409 S~~E~fgl~~lEAma~G----~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~ 484 (536)
T 3vue_A 409 SRFEPCGLIQLQGMRYG----TPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYE 484 (536)
T ss_dssp CSCCSSCSHHHHHHHTT----CCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHH
T ss_pred cccCCCCHHHHHHHHcC----CCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHH
Confidence 99999999999999995 5799999999998884 366 788999999999999988632 12223
Q ss_pred HHHHHHhHHHhcCCHHHHHHHHHHHHHcc
Q psy2719 481 LRMSQLRHREQQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 481 ~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 509 (808)
++.+++ ..+.+||++-+++|++.++++
T Consensus 485 ~~~~~a--m~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 485 EMVRNC--MNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HHHHHH--HHSCCSSHHHHHHHHHHHHTT
T ss_pred HHHHHH--HHhcCCHHHHHHHHHHHHHHh
Confidence 322222 225689999999999888876
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.9e-22 Score=222.05 Aligned_cols=219 Identities=11% Similarity=0.067 Sum_probs=168.4
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~ 359 (808)
..++.++|+|||.+.|...... .......++++|+++||+.+.||++.+++|++++.+++|+++ |+++|.+....
T Consensus 154 ~~~~~vi~ngvd~~~~~~~~~~-~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~----l~ivG~g~~~~ 228 (413)
T 3oy2_A 154 KVPINIVSHFVDTKTIYDARKL-VGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAK----VRFLCNSHHES 228 (413)
T ss_dssp CSCEEECCCCCCCCCCTTHHHH-TTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCC----EEEEEECCTTC
T ss_pred CCceEEeCCCCCHHHHHHHHHh-cCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcE----EEEEeCCcccc
Confidence 4678999999999888221110 000000268899999999999999999999999999999875 77778654221
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEE
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLI 439 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vV 439 (808)
. .++++.+++++.+.+..-...-+..++++.|.++++++..+|+.||++|+||..||||++++|||||+ .|+|
T Consensus 229 ~---~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G----~PvI 301 (413)
T 3oy2_A 229 K---FDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLG----KPLI 301 (413)
T ss_dssp S---CCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTT----CCEE
T ss_pred h---hhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcC----CCEE
Confidence 1 12556667776665532000000126788999999999999999999999999999999999999996 5699
Q ss_pred EcCCCCCccccCc------------------eE--EECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHH
Q psy2719 440 LSPFAGAGGMMHE------------------AL--LVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHW 498 (808)
Q Consensus 440 lS~~~G~~~~l~~------------------~l--lvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W 498 (808)
+|+.+|..+.+.+ |+ +++|.|++++|++| ++++ .+++++++.+++++++ +.++++..
T Consensus 302 ~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~ 379 (413)
T 3oy2_A 302 ISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFK-DEKNRKEYGKRVQDFVKTKPTWDDI 379 (413)
T ss_dssp EECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTT-SHHHHHHHHHHHHHHHTTSCCHHHH
T ss_pred EcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhc-CHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999888887742 77 99999999999999 9998 4566667777788887 57799999
Q ss_pred HHHHHHHHHccccc
Q psy2719 499 MNSFLSSMGALDND 512 (808)
Q Consensus 499 ~~~~l~~l~~~~~~ 512 (808)
++++++.++++.+.
T Consensus 380 ~~~~~~~~~~~~~~ 393 (413)
T 3oy2_A 380 SSDIIDFFNSLLRV 393 (413)
T ss_dssp HHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999887544
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-21 Score=215.34 Aligned_cols=267 Identities=16% Similarity=0.166 Sum_probs=187.8
Q ss_pred CCCEEEEeccchHHH-HHHHHhhcCC-EE-EeccHHH-----------HHHHHHHHHHHhCc-eeecCCeEEEEcCeEEE
Q psy2719 218 VVPVVWIHDYQLLVA-ATTIRQVAYD-FV-GFHIEDY-----------CLNFIDCCCRRLGS-RVDRNNMLVELAGRTVH 282 (808)
Q Consensus 218 ~~dvvwihDyhl~ll-p~~lr~~~~d-li-gf~~~~~-----------~~~fl~~~~~~l~~-~~~~~~~~i~~~gr~~~ 282 (808)
..|+||+|+...+.+ ...++..... +| .+|.... .+.++..++.++.. +...+.+ ....+...+
T Consensus 86 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~-~~~~~~~~~ 164 (394)
T 3okp_A 86 EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRF-KSAFGSHPT 164 (394)
T ss_dssp TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHH-HHHHCSSSE
T ss_pred CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHH-HHhcCCCCC
Confidence 379999998765433 3334443322 33 5665432 12222222222211 1111110 112233468
Q ss_pred EEEeecCcCccccchh-hcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 283 VKALPIGIPFERFVQL-AENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 283 v~v~p~GID~~~f~~~-~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
+.++|+|||.+.|.+. .......++. .++++|+++||+.+.||++.+++|++++.+++|+++ |+++|.+
T Consensus 165 ~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~----l~i~G~g-- 238 (394)
T 3okp_A 165 FEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQ----LLIVGSG-- 238 (394)
T ss_dssp EEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCE----EEEECCC--
T ss_pred eEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeE----EEEEcCc--
Confidence 8999999999988762 2211222322 455899999999999999999999999999988764 7777642
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCC-------CCCChhHHHHHHh
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLR-------DGMNLVAKEYVAC 430 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~-------EG~gLv~~Eama~ 430 (808)
+. .+++++++..++. . +.+.|.++++++..+|+.||++|+||.. ||||++++|||||
T Consensus 239 ---~~----~~~l~~~~~~~~~--------~-v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~ 302 (394)
T 3okp_A 239 ---RY----ESTLRRLATDVSQ--------N-VKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQAC 302 (394)
T ss_dssp ---TT----HHHHHHHTGGGGG--------G-EEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHT
T ss_pred ---hH----HHHHHHHHhcccC--------e-EEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHc
Confidence 22 2334444433221 3 4457899999999999999999999999 9999999999999
Q ss_pred ccCCCceEEEcCCCCCccccC--ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhc-CCHHHHHHHHHHHHH
Q psy2719 431 QIREPGVLILSPFAGAGGMMH--EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQ-LDVNHWMNSFLSSMG 507 (808)
Q Consensus 431 ~~~~~g~vVlS~~~G~~~~l~--~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l~~l~ 507 (808)
+ .|+|+|+.+|..+.+. +|++++|.|+++++++|.++++ .++.+++..+++++.+.+ ++++..++++++.++
T Consensus 303 G----~PvI~~~~~~~~e~i~~~~g~~~~~~d~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 377 (394)
T 3okp_A 303 G----VPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLD-DPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQ 377 (394)
T ss_dssp T----CCEEECSSTTGGGGCCTTTEEECCTTCHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHH
T ss_pred C----CCEEEeCCCChHHHHhcCCceEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 6 5699999988888774 5999999999999999999998 456666666777887765 899999999999999
Q ss_pred ccccc
Q psy2719 508 ALDND 512 (808)
Q Consensus 508 ~~~~~ 512 (808)
++...
T Consensus 378 ~~~r~ 382 (394)
T 3okp_A 378 SEPRK 382 (394)
T ss_dssp SCCC-
T ss_pred HhccC
Confidence 87543
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-22 Score=213.51 Aligned_cols=214 Identities=15% Similarity=0.186 Sum_probs=141.3
Q ss_pred hhhhcCCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHH
Q psy2719 535 NNYVDGNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLE 614 (808)
Q Consensus 535 ~~y~~~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~ 614 (808)
.+|.. ...++|+||+||||++ +...++++++++|++++++
T Consensus 14 ~~~~~-~~~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~---------------------------------- 53 (285)
T 3pgv_A 14 NLYFQ-GMYQVVASDLDGTLLS-----PDHFLTPYAKETLKLLTAR---------------------------------- 53 (285)
T ss_dssp --------CCEEEEECCCCCSC-----TTSCCCHHHHHHHHHHHTT----------------------------------
T ss_pred ccccc-CcceEEEEeCcCCCCC-----CCCcCCHHHHHHHHHHHHC----------------------------------
Confidence 34544 5678999999999998 3467999999999999987
Q ss_pred HHhCCCCCeEEEEeCCChhhHHHhcCc--cceEEEcccceeEecCCCc-eeecCCChhHHHHHHHHHHHHHhh------c
Q psy2719 615 RLANMPDVNIGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPDGT-KFVHPVPKEYAEKLRQLIKALQDE------V 685 (808)
Q Consensus 615 ~l~~~pg~~v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~------~ 685 (808)
|+.|+|+|||+...+..++.. .+.++|++||+.++..++. .+..+++.+ .+.++++.+... .
T Consensus 54 ------G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~---~~~~i~~~~~~~~~~~~~~ 124 (285)
T 3pgv_A 54 ------GINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRD---IAADLFEIVRNDPKIVTNV 124 (285)
T ss_dssp ------TCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHH---HHHHHTTTTTTCTTCEEEE
T ss_pred ------CCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHH---HHHHHHHHHhhcCCeEEEE
Confidence 999999999999888776632 2357899999999965444 455667665 455665522211 0
Q ss_pred -cCCCcEEEecCc-------------------------EEEEEcCcCChhhHHHHHHHHHHHHHhcCee-EEccCeEEEE
Q psy2719 686 -CHDGAWIENKGV-------------------------LLTFHYRETPIERREYIIDRASQIFLEAGFE-PHNALMAIEA 738 (808)
Q Consensus 686 -~~~g~~ie~k~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~g~~~vEv 738 (808)
...+.+...... ...+.+...+++....+.+.+.+.+.. .+. +.++..++||
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei 203 (285)
T 3pgv_A 125 YREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGD-RVNVSFSTLTCLEV 203 (285)
T ss_dssp EETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGG-GEEEEESSTTEEEE
T ss_pred EcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcC-CEEEEEeCCceEEE
Confidence 011111110000 000001111211111222222222211 244 4577899999
Q ss_pred eCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCcccccccc--ccCcC
Q psy2719 739 KPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQ--GSNHT 806 (808)
Q Consensus 739 ~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~--~~~~~ 806 (808)
.|+ ++|||.|+++++++ +|++.+ +++||| |++||+.++ ++|||+| .+++|+.|+| ++++|
T Consensus 204 ~~~-~~~K~~al~~l~~~-lgi~~~---~~ia~GD~~NDi~ml~~ag---~~vAm~Na~~~vk~~A~~~~v~~sn 270 (285)
T 3pgv_A 204 MAG-GVSKGHALEAVAKM-LGYTLS---DCIAFGDGMNDAEMLSMAG---KGCIMANAHQRLKDLHPELEVIGSN 270 (285)
T ss_dssp EET-TCSHHHHHHHHHHH-TTCCGG---GEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCTTSEECCCG
T ss_pred ecC-CCChHHHHHHHHHH-hCCCHH---HEEEECCcHhhHHHHHhcC---CEEEccCCCHHHHHhCCCCEecccC
Confidence 998 99999999999997 899875 799999 999999994 5699997 6899999996 77765
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-21 Score=219.92 Aligned_cols=215 Identities=19% Similarity=0.164 Sum_probs=166.1
Q ss_pred eEEEEEEeecCcCccccchhhcCc-hhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEE
Q psy2719 279 RTVHVKALPIGIPFERFVQLAENA-PENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQIS 353 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~~-~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig 353 (808)
...++.++|+|||.+.|.+..... ...+++ .++++|+++||+.+.||++.+++|++.+.+++|+. ++.|+++|
T Consensus 206 ~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~--~~~l~i~G 283 (438)
T 3c48_A 206 DPDRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDR--NLRVIICG 283 (438)
T ss_dssp CGGGEEECCCCCCTTTSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTC--SEEEEEEC
T ss_pred ChhheEEecCCccccccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCc--ceEEEEEe
Confidence 345688999999999887642211 112222 46789999999999999999999999999998843 46688887
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccC
Q psy2719 354 VPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIR 433 (808)
Q Consensus 354 ~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~ 433 (808)
.+.. +++ ..+++++++.+.+.. +.+.+.|.++.+++..+|+.||++|+||..||||++++|||||+
T Consensus 284 ~~~~-~g~----~~~~l~~~~~~~~l~-------~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G-- 349 (438)
T 3c48_A 284 GPSG-PNA----TPDTYRHMAEELGVE-------KRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASG-- 349 (438)
T ss_dssp CBC-----------CHHHHHHHHTTCT-------TTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTT--
T ss_pred CCCC-CCc----HHHHHHHHHHHcCCC-------CcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcC--
Confidence 5321 122 334556666554421 22446799999999999999999999999999999999999996
Q ss_pred CCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHccc
Q psy2719 434 EPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALD 510 (808)
Q Consensus 434 ~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 510 (808)
.|+|+|+.+|..+.+. +|++++|.|++++|++|.++++. ++.+.+..+++++++.++++...++++++.++++.
T Consensus 350 --~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 426 (438)
T 3c48_A 350 --TPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD-DETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAI 426 (438)
T ss_dssp --CCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 5699999888888874 49999999999999999999984 55666666677888888999999999999988875
Q ss_pred cc
Q psy2719 511 ND 512 (808)
Q Consensus 511 ~~ 512 (808)
+.
T Consensus 427 ~~ 428 (438)
T 3c48_A 427 AN 428 (438)
T ss_dssp HT
T ss_pred hh
Confidence 44
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=234.27 Aligned_cols=218 Identities=17% Similarity=0.188 Sum_probs=168.0
Q ss_pred eEEEEEEeecCcCccccchhhcC--chhhhh--------c-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcE
Q psy2719 279 RTVHVKALPIGIPFERFVQLAEN--APENLK--------D-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKV 347 (808)
Q Consensus 279 r~~~v~v~p~GID~~~f~~~~~~--~~~~~~--------~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v 347 (808)
...++.++|+|||.+.|.+.... ...+++ . .++++|+++||+.+.||++.+++|++.+.+++|+. +
T Consensus 219 ~~~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~ 295 (499)
T 2r60_A 219 DDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKA---N 295 (499)
T ss_dssp CGGGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---E
T ss_pred CCCCeEEECCCcChhhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCc---e
Confidence 44678999999999988764210 011111 1 46789999999999999999999999988776642 3
Q ss_pred EEEEEEcCCCCC------h-HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhc----CeEEECCC
Q psy2719 348 TFLQISVPSRTD------V-LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDS----AIALVTPL 416 (808)
Q Consensus 348 ~lv~ig~~~~~~------~-~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~A----dv~v~~S~ 416 (808)
.|+++|... +. . ....++.+++++++.+++.. +.+.+.|.++++++..+|+.| |++|+||.
T Consensus 296 ~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~-------~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~ 367 (499)
T 2r60_A 296 LVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR-------GKVSMFPLNSQQELAGCYAYLASKGSVFALTSF 367 (499)
T ss_dssp EEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB-------TTEEEEECCSHHHHHHHHHHHHHTTCEEEECCS
T ss_pred EEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCC-------ceEEECCCCCHHHHHHHHHhcCcCCCEEEECcc
Confidence 566666411 11 0 11223466777777776532 224457999999999999999 99999999
Q ss_pred CCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhc-
Q psy2719 417 RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQ- 492 (808)
Q Consensus 417 ~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~- 492 (808)
+||||++++|||||+ .|+|+|+.+|..+.+. +|++|+|.|++++|++|.++++ +++.+.+..+++++++.+
T Consensus 368 ~Eg~~~~~lEAma~G----~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~ 442 (499)
T 2r60_A 368 YEPFGLAPVEAMASG----LPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE-SEETWSAYQEKGKQRVEER 442 (499)
T ss_dssp CBCCCSHHHHHHHTT----CCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHHcC----CCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHh
Confidence 999999999999995 5699999888888774 4899999999999999999998 455666666777888876
Q ss_pred CCHHHHHHHHHHHHHccccc
Q psy2719 493 LDVNHWMNSFLSSMGALDND 512 (808)
Q Consensus 493 ~~~~~W~~~~l~~l~~~~~~ 512 (808)
++++..++++++.++++.+.
T Consensus 443 fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 443 YTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp SBHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHhh
Confidence 99999999999998877543
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=243.75 Aligned_cols=212 Identities=16% Similarity=0.178 Sum_probs=164.8
Q ss_pred EEEEeecCcCccccchhhcCch-----------------hhhh------cCCCeEEEEEcCccccCChHHHHHHHHHHHH
Q psy2719 282 HVKALPIGIPFERFVQLAENAP-----------------ENLK------DENLKVILGVDRLDYTKGLVHRIKAFERLLE 338 (808)
Q Consensus 282 ~v~v~p~GID~~~f~~~~~~~~-----------------~~~~------~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~ 338 (808)
++.+||+|||.+.|.+...... ..++ ..++++|+++||+++.||++.+++|+.++.+
T Consensus 520 ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~ 599 (816)
T 3s28_A 520 KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTR 599 (816)
T ss_dssp TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHH
T ss_pred CEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHh
Confidence 7899999999999977542211 0001 1467899999999999999999999999887
Q ss_pred hCCCccCcEEEEEEEcCCC--CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcC----CCCHHHHHHHHH-hcCeE
Q psy2719 339 KHPEYVEKVTFLQISVPSR--TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFG----CIGQEELAALYR-DSAIA 411 (808)
Q Consensus 339 ~~p~~~~~v~lv~ig~~~~--~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~----~v~~~el~aly~-~Adv~ 411 (808)
.+|++ .|+++|.+.. ...++..+..+++++++.+.+.. ..|. +.| .++.+++..+|+ +||+|
T Consensus 600 ~~~~v----~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~------~~V~-flG~~~~~v~~~eL~~~~~~aaDvf 668 (816)
T 3s28_A 600 LRELA----NLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLN------GQFR-WISSQMDRVRNGELYRYICDTKGAF 668 (816)
T ss_dssp HHHHC----EEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCB------BBEE-EECCCCCHHHHHHHHHHHHHTTCEE
T ss_pred hCCCe----EEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCC------CcEE-EccCccccCCHHHHHHHHHhcCeEE
Confidence 76654 5888886541 12233445667777777776532 1344 456 455689999998 68999
Q ss_pred EECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHh----CCCHHHHHHHHH
Q psy2719 412 LVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRAL----CMPRDERELRMS 484 (808)
Q Consensus 412 v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L----~~~~~e~~~r~~ 484 (808)
|+||.+||||++++|||||| .|+|+|+.+|..+.+. +|++|+|.|++++|++|.+++ .. ++.+.+..+
T Consensus 669 V~PS~~EgfglvllEAMA~G----~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d-~~~~~~m~~ 743 (816)
T 3s28_A 669 VQPALYEAFGLTVVEAMTCG----LPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKED-PSHWDEISK 743 (816)
T ss_dssp EECCSCBSSCHHHHHHHHTT----CCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHC-THHHHHHHH
T ss_pred EECCCccCccHHHHHHHHcC----CCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccC-HHHHHHHHH
Confidence 99999999999999999995 5699999999888884 599999999999999998877 54 456666777
Q ss_pred HHhHHH-hcCCHHHHHHHHHHHHHcc
Q psy2719 485 QLRHRE-QQLDVNHWMNSFLSSMGAL 509 (808)
Q Consensus 485 ~~~~~v-~~~~~~~W~~~~l~~l~~~ 509 (808)
++++++ +.++|..+++++++..+..
T Consensus 744 ~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 744 GGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp HHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 788888 7899999999999877654
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=207.61 Aligned_cols=206 Identities=17% Similarity=0.159 Sum_probs=143.0
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|+||+||||++ +...++++++++|+++.++ |+
T Consensus 5 ~kli~fDlDGTLl~-----~~~~i~~~~~~al~~l~~~----------------------------------------G~ 39 (279)
T 4dw8_A 5 YKLIVLDLDGTLTN-----SKKEISSRNRETLIRIQEQ----------------------------------------GI 39 (279)
T ss_dssp CCEEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHT----------------------------------------TC
T ss_pred ceEEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 46999999999998 3457999999999999987 99
Q ss_pred eEEEEeCCChhhHHHhcC---cc--ceEEEcccceeEecC--CCceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEec
Q psy2719 623 NIGIISGRTLENLMKMVN---IE--KVTYAGSHGLEILHP--DGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENK 695 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~---~~--~~~li~~nG~~i~~~--~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k 695 (808)
.|+++|||+...+..++. .. ..++|++||+.+++. ++..+..+++.+ .+.++++.+.+. .-...+...
T Consensus 40 ~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~---~~~~i~~~~~~~--~~~~~~~~~ 114 (279)
T 4dw8_A 40 RLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNE---VVPVLYECARTN--HLSILTYDG 114 (279)
T ss_dssp EEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGG---GHHHHHHHHHHT--TCEEEEEET
T ss_pred EEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHH---HHHHHHHHHHHc--CCEEEEEEC
Confidence 999999999998877663 22 367899999999864 333455677765 455666666543 000111111
Q ss_pred CcEEEE----------------EcCcCChhh--------------HHHHHHHHHHHHH-hc--CeeE-EccCeEEEEeCC
Q psy2719 696 GVLLTF----------------HYRETPIER--------------REYIIDRASQIFL-EA--GFEP-HNALMAIEAKPP 741 (808)
Q Consensus 696 ~~~~~~----------------~~~~~~~~~--------------~~~~~~~~~~~~~-~~--~~~v-~~g~~~vEv~p~ 741 (808)
...... .+...+.-. ..+..+.+.+.+. .+ .+.+ .++..++||.|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~ 194 (279)
T 4dw8_A 115 AEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQ 194 (279)
T ss_dssp TEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEECT
T ss_pred CEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecC
Confidence 100000 000000000 0111222222222 23 2544 577889999998
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 742 VKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 742 ~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
++|||.|++.++++ +|++++ ++++|| |++||+.++ ++|+|+| .+++|+.|+|+++++
T Consensus 195 -~~~K~~~l~~l~~~-lgi~~~---~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~~A~~v~~~~ 256 (279)
T 4dw8_A 195 -GIDKALSLSVLLEN-IGMTRE---EVIAIGDGYNDLSMIKFAG---MGVAMGNAQEPVKKAADYITLTN 256 (279)
T ss_dssp -TCCHHHHHHHHHHH-HTCCGG---GEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCSEECCCG
T ss_pred -CCChHHHHHHHHHH-cCCCHH---HEEEECCChhhHHHHHHcC---cEEEcCCCcHHHHHhCCEEcCCC
Confidence 99999999999997 899875 799999 999999994 5699997 589999999999876
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.6e-22 Score=228.95 Aligned_cols=204 Identities=8% Similarity=0.094 Sum_probs=157.4
Q ss_pred EEEEEEeecCcCccccchhhcC-----------------chhhhhc----C-CCeEEEEEcCccccCChHHHHHHHHHHH
Q psy2719 280 TVHVKALPIGIPFERFVQLAEN-----------------APENLKD----E-NLKVILGVDRLDYTKGLVHRIKAFERLL 337 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~-----------------~~~~~~~----~-~~~iil~V~Rl~~~KGi~~~l~A~~~ll 337 (808)
..++.++|+|||.+.|.+.... ...++++ . ++++|+++||+.+.||++.+++|++.+.
T Consensus 238 ~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 317 (485)
T 1rzu_A 238 AHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIV 317 (485)
T ss_dssp GGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHH
T ss_pred cCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHH
Confidence 4578899999999988764321 1122222 2 2679999999999999999999999987
Q ss_pred HhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCC
Q psy2719 338 EKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLR 417 (808)
Q Consensus 338 ~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~ 417 (808)
+. + +.|+++|.+. ..+++++++++.+.+ ..|+++.|. +.+++..+|+.||++|+||.+
T Consensus 318 ~~--~----~~l~ivG~g~-------~~~~~~l~~~~~~~~--------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~ 375 (485)
T 1rzu_A 318 SL--G----GRLVVLGAGD-------VALEGALLAAASRHH--------GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRF 375 (485)
T ss_dssp HT--T----CEEEEEECBC-------HHHHHHHHHHHHHTT--------TTEEEEESC-CHHHHHHHHHHCSEEEECCSC
T ss_pred hc--C----ceEEEEeCCc-------hHHHHHHHHHHHhCC--------CcEEEecCC-CHHHHHHHHhcCCEEEECccc
Confidence 63 3 4588888532 134566677766653 146667777 888889999999999999999
Q ss_pred CCCChhHHHHHHhccCCCceEEEcCCCCCccccC------------ceEEECCCCHHHHHHHHHHHhC--CCHHHHHHHH
Q psy2719 418 DGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH------------EALLVNPYEIDAAANVLHRALC--MPRDERELRM 483 (808)
Q Consensus 418 EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~------------~~llvnP~d~~~lA~ai~~~L~--~~~~e~~~r~ 483 (808)
||||++++|||||+ .|+|+|+.+|..+.+. +|++|+|.|++++|++|.++++ ..++.+.+..
T Consensus 376 E~~~~~~lEAma~G----~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~ 451 (485)
T 1rzu_A 376 EPCGLTQLYALRYG----CIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQ 451 (485)
T ss_dssp CSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred CCCCHHHHHHHHCC----CCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999995 6799999988888773 4899999999999999999993 1345555444
Q ss_pred HHHhHHHhcCCHHHHHHHHHHHHHcccc
Q psy2719 484 SQLRHREQQLDVNHWMNSFLSSMGALDN 511 (808)
Q Consensus 484 ~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 511 (808)
+++++ +.++++..++++++..+++.+
T Consensus 452 ~~~~~--~~fs~~~~~~~~~~~y~~~~~ 477 (485)
T 1rzu_A 452 KLGMK--SDVSWEKSAGLYAALYSQLIS 477 (485)
T ss_dssp HHHHT--CCCBHHHHHHHHHHHHHHHTC
T ss_pred HHHHH--HhCChHHHHHHHHHHHHHhhC
Confidence 44443 788999999999988887644
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4.6e-22 Score=228.02 Aligned_cols=203 Identities=11% Similarity=0.059 Sum_probs=156.9
Q ss_pred EEEEEeecCcCccccchhhcC-----------------chhhhhc----C--CCeEEEEEcCccccCChHHHHHHHHHHH
Q psy2719 281 VHVKALPIGIPFERFVQLAEN-----------------APENLKD----E--NLKVILGVDRLDYTKGLVHRIKAFERLL 337 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~-----------------~~~~~~~----~--~~~iil~V~Rl~~~KGi~~~l~A~~~ll 337 (808)
.++.++|+|||++.|.+.... ...++++ . ++++|+++||+.+.||++.+++|++.+.
T Consensus 239 ~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 318 (485)
T 2qzs_A 239 GRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLL 318 (485)
T ss_dssp TCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHH
T ss_pred CceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHh
Confidence 578899999999988764321 0122222 2 6789999999999999999999999987
Q ss_pred HhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCC
Q psy2719 338 EKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLR 417 (808)
Q Consensus 338 ~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~ 417 (808)
+. + +.|+++|.+. .++++++++++.+.+ ..|+++.|. +.+++..+|+.||++|+||.+
T Consensus 319 ~~--~----~~l~ivG~g~-------~~~~~~l~~~~~~~~--------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~ 376 (485)
T 2qzs_A 319 EQ--G----GQLALLGAGD-------PVLQEGFLAAAAEYP--------GQVGVQIGY-HEAFSHRIMGGADVILVPSRF 376 (485)
T ss_dssp HT--T----CEEEEEEEEC-------HHHHHHHHHHHHHST--------TTEEEEESC-CHHHHHHHHHHCSEEEECCSC
T ss_pred hC--C----cEEEEEeCCc-------hHHHHHHHHHHHhCC--------CcEEEeCCC-CHHHHHHHHHhCCEEEECCcc
Confidence 62 3 4588787532 124566667766643 146667787 888889999999999999999
Q ss_pred CCCChhHHHHHHhccCCCceEEEcCCCCCccccC------------ceEEECCCCHHHHHHHHHHHhC--CCHHHHHHHH
Q psy2719 418 DGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH------------EALLVNPYEIDAAANVLHRALC--MPRDERELRM 483 (808)
Q Consensus 418 EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~------------~~llvnP~d~~~lA~ai~~~L~--~~~~e~~~r~ 483 (808)
||||++++|||||+ .|+|+|+.+|..+.+. +|++|+|.|++++|++|.++++ ..++.+.+..
T Consensus 377 E~~g~~~lEAma~G----~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~ 452 (485)
T 2qzs_A 377 EPCGLTQLYGLKYG----TLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQ 452 (485)
T ss_dssp CSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred CCCcHHHHHHHHCC----CCEEECCCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99999999999995 6799999988888773 4899999999999999999993 2344554444
Q ss_pred HHHhHHHhcCCHHHHHHHHHHHHHcccc
Q psy2719 484 SQLRHREQQLDVNHWMNSFLSSMGALDN 511 (808)
Q Consensus 484 ~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 511 (808)
++++ .+.++++..++++++.++++..
T Consensus 453 ~~~~--~~~fs~~~~~~~~~~ly~~~~~ 478 (485)
T 2qzs_A 453 RQAM--AMDFSWQVAAKSYRELYYRLKL 478 (485)
T ss_dssp HHHH--HCCCCHHHHHHHHHHHHHHHC-
T ss_pred HHHH--hhcCCHHHHHHHHHHHHHHhhh
Confidence 4444 3788999999999998887644
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=207.79 Aligned_cols=205 Identities=12% Similarity=0.112 Sum_probs=143.7
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|+||+||||++ +...++++++++|+++.++ |+
T Consensus 6 ~kli~fDlDGTLl~-----~~~~i~~~~~~al~~l~~~----------------------------------------G~ 40 (290)
T 3dnp_A 6 KQLLALNIDGALLR-----SNGKIHQATKDAIEYVKKK----------------------------------------GI 40 (290)
T ss_dssp CCEEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHT----------------------------------------TC
T ss_pred ceEEEEcCCCCCCC-----CCCccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 46999999999998 3457999999999999887 99
Q ss_pred eEEEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCCc-eeecCCChhHHHHHHHHHHHHHhhc------cCCCcEEE
Q psy2719 623 NIGIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDGT-KFVHPVPKEYAEKLRQLIKALQDEV------CHDGAWIE 693 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~~------~~~g~~ie 693 (808)
.|+++|||+...+..++... ..++|++||+.++...+. .+..+++.+ .+.++++.+.+.- ...+.+..
T Consensus 41 ~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~ 117 (290)
T 3dnp_A 41 YVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFFEKRISDD---HTFNIVQVLESYQCNIRLLHEKYSIGN 117 (290)
T ss_dssp EEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSCSEECCCCHH---HHHHHHHHHHTSSCEEEEECSSCEEEC
T ss_pred EEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCEEEecCCCHH---HHHHHHHHHHHcCceEEEEECCcEEee
Confidence 99999999998887766421 237899999999864333 455667654 6777888776630 11111211
Q ss_pred ecCcEE-----------------EEEcCc------------------CChhhHHHHHHHHHHHHHhc-CeeE-EccCeEE
Q psy2719 694 NKGVLL-----------------TFHYRE------------------TPIERREYIIDRASQIFLEA-GFEP-HNALMAI 736 (808)
Q Consensus 694 ~k~~~~-----------------~~~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~v-~~g~~~v 736 (808)
...... ...+.. .+++....+.+.+ .... ++.+ .++..++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l---~~~~~~~~~~~s~~~~~ 194 (290)
T 3dnp_A 118 KKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETI---TKAFPAVDVIRVNDEKL 194 (290)
T ss_dssp CCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEEEEECCGGGHHHHHHHH---HHHCTTEEEEEEETTEE
T ss_pred ccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEEEEeCCHHHHHHHHHHH---HhhCCcEEEEEeCCCeE
Confidence 110000 000000 0111111111211 1112 4554 5678999
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 737 EAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 737 Ev~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
||.|+ ++|||.|++.++++ +|++++ ++++|| |++||+.+| ++|+|+| .+++|+.|+|+++++
T Consensus 195 ei~~~-~~~K~~~l~~l~~~-lgi~~~---~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~~Ad~v~~s~ 261 (290)
T 3dnp_A 195 NIVPK-GVSKEAGLALVASE-LGLSMD---DVVAIGHQYDDLPMIELAG---LGVAMGNAVPEIKRKADWVTRSN 261 (290)
T ss_dssp EEEET-TCCHHHHHHHHHHH-TTCCGG---GEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHSSEECCCT
T ss_pred EEEEC-CCCHHHHHHHHHHH-cCCCHH---HEEEECCchhhHHHHHhcC---CEEEecCCcHHHHHhcCEECCCC
Confidence 99998 99999999999997 899875 799999 999999994 5699997 589999999999876
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-21 Score=208.59 Aligned_cols=205 Identities=13% Similarity=0.211 Sum_probs=145.4
Q ss_pred ceEEEEecccccccCCCCCCccCCCHH-HHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEE-TKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~-~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
.++|+||+||||++ +...++++ +.++|+++.++ |
T Consensus 37 iKli~fDlDGTLld-----~~~~i~~~~~~~al~~l~~~----------------------------------------G 71 (304)
T 3l7y_A 37 VKVIATDMDGTFLN-----SKGSYDHNRFQRILKQLQER----------------------------------------D 71 (304)
T ss_dssp CSEEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHHT----------------------------------------T
T ss_pred eEEEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHHC----------------------------------------C
Confidence 57999999999998 34578888 89999999987 9
Q ss_pred CeEEEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhc--------cCCCcE
Q psy2719 622 VNIGIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEV--------CHDGAW 691 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~--------~~~g~~ 691 (808)
+.|+++|||+...+..++... ..++|++||+.+...++..+..+++.+ .+.++++.+.+.. ...+.+
T Consensus 72 ~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~ 148 (304)
T 3l7y_A 72 IRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQRE---DIASIIYFIEEKYPQAVIALSGEKKGY 148 (304)
T ss_dssp CEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETTEEEEECCCCHH---HHHHHHHHHHHHCTTSEEEEEESSCEE
T ss_pred CEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECCEEEEEecCCHH---HHHHHHHHHHHhcCCeEEEEEcCCCEe
Confidence 999999999999998887632 368999999999765544556677765 4566666665420 111222
Q ss_pred EEec---------------------------C--cEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeE-EccCeEEEEeCC
Q psy2719 692 IENK---------------------------G--VLLTFHYRETPIERREYIIDRASQIFLEAGFEP-HNALMAIEAKPP 741 (808)
Q Consensus 692 ie~k---------------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~g~~~vEv~p~ 741 (808)
+... . ..+.+.. +++....+.+.+.+.+....+.+ .++..++||.|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ki~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~ 225 (304)
T 3l7y_A 149 LKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFKLTLQV---KEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITK 225 (304)
T ss_dssp EETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEEEEEEC---CGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEET
T ss_pred eeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEEEEEEc---CHHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcC
Confidence 2110 0 0111111 11112222222221111112554 577889999998
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 742 VKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 742 ~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
++|||.|+++++++ +|++++ ++++|| |++||+.++ ++|+|+| .+++|+.|+|+++++
T Consensus 226 -~~~K~~al~~l~~~-lgi~~~---e~i~~GDs~NDi~m~~~ag---~~vam~na~~~~k~~Ad~v~~~~ 287 (304)
T 3l7y_A 226 -GLHKGWALQQLLKR-WNFTSD---HLMAFGDGGNDIEMLKLAK---YSYAMANAPKNVKAAANYQAKSN 287 (304)
T ss_dssp -TCSHHHHHHHHHHH-TTCCGG---GEEEEECSGGGHHHHHHCT---EEEECTTSCHHHHHHCSEECCCG
T ss_pred -CCCHHHHHHHHHHH-hCcCHH---HEEEECCCHHHHHHHHhcC---CeEEcCCcCHHHHHhccEEcCCC
Confidence 99999999999997 899875 799999 999999994 5699997 689999999999876
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-21 Score=203.86 Aligned_cols=204 Identities=15% Similarity=0.161 Sum_probs=142.9
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.|+|+||+||||++. +...++++++++|++++++ |+
T Consensus 12 iKli~~DlDGTLl~~----~~~~i~~~~~~al~~l~~~----------------------------------------G~ 47 (268)
T 3r4c_A 12 IKVLLLDVDGTLLSF----ETHKVSQSSIDALKKVHDS----------------------------------------GI 47 (268)
T ss_dssp CCEEEECSBTTTBCT----TTCSCCHHHHHHHHHHHHT----------------------------------------TC
T ss_pred eEEEEEeCCCCCcCC----CCCcCCHHHHHHHHHHHHC----------------------------------------CC
Confidence 579999999999983 2357999999999999988 99
Q ss_pred eEEEEeCCChhhHHHhcCccceEEEcccceeE-ecCCCceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEecCcEEEE
Q psy2719 623 NIGIISGRTLENLMKMVNIEKVTYAGSHGLEI-LHPDGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTF 701 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~~~~~li~~nG~~i-~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~~~ 701 (808)
.|+++|||+...+..+......++|++||+.+ +..++..+..+++.+ .+.++++.+.+. .-...+........
T Consensus 48 ~~~iaTGR~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~~~~~~~l~~~---~~~~i~~~~~~~--~~~~~~~~~~~~~~- 121 (268)
T 3r4c_A 48 KIVIATGRAASDLHEIDAVPYDGVIALNGAECVLRDGSVIRKVAIPAQ---DFRKSMELAREF--DFAVALELNEGVFV- 121 (268)
T ss_dssp EEEEECSSCTTCCGGGTTSCCCEEEEGGGTEEEETTSCEEEECCCCHH---HHHHHHHHHHHT--TCEEEEEETTEEEE-
T ss_pred EEEEEcCCChHHhHHHHhcCCCcEEEeCCcEEEEcCCeEEEEecCCHH---HHHHHHHHHHHc--CcEEEEEECCEEEE-
Confidence 99999999988774433333357899999999 887655566777765 566677766553 11111222111111
Q ss_pred EcCcCChhhH----------------H-HHH-------------HHHHHHHHhc-Cee-EEccCeEEEEeCCCCCCHHHH
Q psy2719 702 HYRETPIERR----------------E-YII-------------DRASQIFLEA-GFE-PHNALMAIEAKPPVKWDQGRA 749 (808)
Q Consensus 702 ~~~~~~~~~~----------------~-~~~-------------~~~~~~~~~~-~~~-v~~g~~~vEv~p~~~v~KG~a 749 (808)
. ...+... . +.. ....++...+ ++. +.++..++||.|+ ++|||.|
T Consensus 122 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~-~~~K~~~ 198 (268)
T 3r4c_A 122 -N-RLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFYFDEEAEQKVMPLLSGLSATRWHPLFADVNVA-GTSKATG 198 (268)
T ss_dssp -S-CCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEEECCHHHHHHHGGGCTTEEEEEEETTEEEEEET-TCCHHHH
T ss_pred -e-CCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEEecChHHHHHHHHhCCCcEEEEecCCeEEEeeC-CCCHHHH
Confidence 0 0001000 0 000 0111222222 343 3567789999998 9999999
Q ss_pred HHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 750 SIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 750 v~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
++.++++ +|++.+ ++++|| |++||+.++ ++|||+| .+++|+.|+|+++++
T Consensus 199 l~~l~~~-lgi~~~---~~ia~GD~~NDi~m~~~ag---~~vam~na~~~~k~~Ad~v~~~~ 253 (268)
T 3r4c_A 199 LSLFADY-YRVKVS---EIMACGDGGNDIPMLKAAG---IGVAMGNASEKVQSVADFVTDTV 253 (268)
T ss_dssp HHHHHHH-TTCCGG---GEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHTCSEECCCT
T ss_pred HHHHHHH-cCCCHH---HEEEECCcHHhHHHHHhCC---CeEEeCCCcHHHHHhcCEeeCCC
Confidence 9999997 899975 799999 999999994 5699997 689999999999986
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=207.47 Aligned_cols=204 Identities=15% Similarity=0.135 Sum_probs=126.6
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|+||+||||++ +...++++++++|+++.++ |+
T Consensus 5 ~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~----------------------------------------G~ 39 (279)
T 3mpo_A 5 IKLIAIDIDGTLLN-----EKNELAQATIDAVQAAKAQ----------------------------------------GI 39 (279)
T ss_dssp CCEEEECC----------------CHHHHHHHHHHHHT----------------------------------------TC
T ss_pred eEEEEEcCcCCCCC-----CCCcCCHHHHHHHHHHHHC----------------------------------------CC
Confidence 46999999999998 3457999999999999887 99
Q ss_pred eEEEEeCCChhhHHHhcC---cc--ceEEEcccceeEecCCCc-eeecCCChhHHHHHHHHHHHHHhhc------cCCCc
Q psy2719 623 NIGIISGRTLENLMKMVN---IE--KVTYAGSHGLEILHPDGT-KFVHPVPKEYAEKLRQLIKALQDEV------CHDGA 690 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~---~~--~~~li~~nG~~i~~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~~------~~~g~ 690 (808)
.|+++|||+...+..++. .. ..++|++||+.+....+. .+...++.+ .++++++.+.+.- ...+.
T Consensus 40 ~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~ 116 (279)
T 3mpo_A 40 KVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYE---DYIDLEAWARKVRAHFQIETPDYI 116 (279)
T ss_dssp EEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHH---HHHHHHHHHHHTTCCEEEECSSCE
T ss_pred EEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHH---HHHHHHHHHHHcCCeEEEEECCEE
Confidence 999999999988877663 21 247999999933333333 445666654 5667777666530 11111
Q ss_pred EEEecC------------------------------cEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeE-EccCeEEEEe
Q psy2719 691 WIENKG------------------------------VLLTFHYRETPIERREYIIDRASQIFLEAGFEP-HNALMAIEAK 739 (808)
Q Consensus 691 ~ie~k~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~g~~~vEv~ 739 (808)
+..... ..+.+ . .+++....+.+.+.+.+.. .+.+ .++..++||.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~--~-~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~ 192 (279)
T 3mpo_A 117 YTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMF--V-DYPQVIEQVKANMPQDFKD-RFSVVQSAPYFIEVM 192 (279)
T ss_dssp EECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEE--E-CCHHHHHHHHHHCCHHHHH-HEEEECCSSSEEEEE
T ss_pred EEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEE--c-CCHHHHHHHHHHHHHHhCC-CEEEEEecCceEEEe
Confidence 211110 00000 0 0111111111222111111 2443 5788999999
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 740 PPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 740 p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
|+ ++|||.|++.++++ +|++++ +++||| |++||+.++ ++|+|+| .+++|+.|+|+++++
T Consensus 193 ~~-~~~K~~~l~~l~~~-lgi~~~---~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~~A~~v~~~~ 256 (279)
T 3mpo_A 193 NR-RASKGGTLSELVDQ-LGLTAD---DVMTLGDQGNDLTMIKYAG---LGVAMGNAIDEVKEAAQAVTLTN 256 (279)
T ss_dssp ES-SCCHHHHHHHHHHH-TTCCGG---GEEEC--CCTTHHHHHHST---EECBC---CCHHHHHCSCBC---
T ss_pred cC-CCChHHHHHHHHHH-cCCCHH---HEEEECCchhhHHHHHhcC---ceeeccCCCHHHHHhcceeccCC
Confidence 98 99999999999997 899875 799999 999999994 5699997 689999999999876
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=205.13 Aligned_cols=207 Identities=19% Similarity=0.239 Sum_probs=138.1
Q ss_pred CCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCC
Q psy2719 541 NCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMP 620 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~p 620 (808)
.+.+||++|+||||++ ++..++++++++|++|++ .
T Consensus 11 ~~~kli~~DlDGTLl~-----~~~~is~~~~~al~~l~~----------------------------------------~ 45 (262)
T 2fue_A 11 KERVLCLFDVDGTLTP-----ARQKIDPEVAAFLQKLRS----------------------------------------R 45 (262)
T ss_dssp --CEEEEEESBTTTBS-----TTSCCCHHHHHHHHHHTT----------------------------------------T
T ss_pred cCeEEEEEeCccCCCC-----CCCcCCHHHHHHHHHHHh----------------------------------------C
Confidence 4678999999999998 345799999999999964 3
Q ss_pred CCeEEEEeCCChhhHHHhcCc------cceEEEcccceeEecCCCceeecC----CChhHHHHHHHHHHHHHhh---c--
Q psy2719 621 DVNIGIISGRTLENLMKMVNI------EKVTYAGSHGLEILHPDGTKFVHP----VPKEYAEKLRQLIKALQDE---V-- 685 (808)
Q Consensus 621 g~~v~I~SGR~~~~l~~~~~~------~~~~li~~nG~~i~~~~~~~~~~~----~~~~~~~~v~~i~~~~~~~---~-- 685 (808)
+.|+|+|||++..+.+.++. ...++|++||+.++..++..+..+ ++. +.++++++.+.+. .
T Consensus 46 -i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~NGa~i~~~~~~i~~~~~~~~l~~---~~~~~i~~~~~~~~~~~~~ 121 (262)
T 2fue_A 46 -VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGE---ELLQDLINFCLSYMALLRL 121 (262)
T ss_dssp -SEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEETTEECCCCCHHHHHCH---HHHHHHHHHHHHHHHTCCC
T ss_pred -CEEEEEcCCCHHHHHHHHhhhhcccccCCeEEECCCcEEEeCCeEEEEeeccccCCH---HHHHHHHHHHHHcCceEEE
Confidence 88999999999988887764 124789999999987443334344 233 3455666555432 1
Q ss_pred -cCCCcEEEecCcEEEEE-c-CcCChh----h---H--HHHHHHHHHHH-Hhc---CeeEE-ccCeEEEEeCCCCCCHHH
Q psy2719 686 -CHDGAWIENKGVLLTFH-Y-RETPIE----R---R--EYIIDRASQIF-LEA---GFEPH-NALMAIEAKPPVKWDQGR 748 (808)
Q Consensus 686 -~~~g~~ie~k~~~~~~~-~-~~~~~~----~---~--~~~~~~~~~~~-~~~---~~~v~-~g~~~vEv~p~~~v~KG~ 748 (808)
...+.+++.+...+.+. + +..+.. + . .+..+.+.+.+ +.+ .+.+. ++..++||+|+ ++|||.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~-~vsKg~ 200 (262)
T 2fue_A 122 PKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPE-GWDKRY 200 (262)
T ss_dssp SCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEET-TCSTTH
T ss_pred EeCCeEEEechHHhhhHHhhcCCCcccccccEEEEcCCHHHHHHHHHHHHHhCCCceEEEEECCCcEEEEecC-CCCHHH
Confidence 12344554433222221 1 212111 0 0 01112222222 222 35554 56789999998 999999
Q ss_pred HHHHHHHHhcCCCCCcceeEEEEe--------CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 749 ASIHILRTMYGVDWSERVRIIYAG--------NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 749 av~~ll~~~~~i~~~~~~~via~G--------D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
||+.| +|++.+ +++||| |++||+.++. .+++|+| .+++|+.|+|+++++
T Consensus 201 al~~l----~gi~~~---~viafGDs~~~~~NDi~Ml~~~~~--~g~av~NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 201 CLDSL----DQDSFD---TIHFFGNETSPGGNDFEIFADPRT--VGHSVVSPQDTVQRCREIFFPET 258 (262)
T ss_dssp HHHHH----TTSCCS---EEEEEESCCSTTSTTHHHHHSTTS--EEEECSSHHHHHHHHHHHHCTTC
T ss_pred HHHHH----HCCCHH---HEEEECCCCCCCCCCHHHHhcCcc--CcEEecCCCHHHHHhhheeCCCC
Confidence 99998 578765 899998 6999998852 2488998 589999999999875
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.3e-21 Score=214.62 Aligned_cols=207 Identities=18% Similarity=0.216 Sum_probs=158.3
Q ss_pred EEEEEeecCcCccccchhhcC---chhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEE
Q psy2719 281 VHVKALPIGIPFERFVQLAEN---APENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQIS 353 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~---~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig 353 (808)
.++.++|+|||+..|.+.... ...++++ .++++|+++||+.+.||++.+++|++.+.+++|+++ |+++|
T Consensus 194 ~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~----l~i~G 269 (416)
T 2x6q_A 194 NKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQ----LLLVG 269 (416)
T ss_dssp TTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCE----EEEEE
T ss_pred cceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEEe
Confidence 467789999998777532111 1122222 467899999999999999999999999999988764 88788
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcC---CCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHh
Q psy2719 354 VPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFG---CIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVAC 430 (808)
Q Consensus 354 ~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~---~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~ 430 (808)
.+...+ ++ .++.+++++.+.+.. ..|.+ .| .++.+++..+|+.||++|+||..||||++++|||||
T Consensus 270 ~g~~~~-~~---~~~~l~~~~~~~~~~------~~V~~-~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~ 338 (416)
T 2x6q_A 270 VMAHDD-PE---GWIYFEKTLRKIGED------YDVKV-LTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWK 338 (416)
T ss_dssp CCCTTC-HH---HHHHHHHHHHHHTTC------TTEEE-EEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHT
T ss_pred cCcccc-hh---HHHHHHHHHHHhCCC------CcEEE-ecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHc
Confidence 543211 22 334455666665432 14554 45 455889999999999999999999999999999999
Q ss_pred ccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHh-cCCHHHHHHHHHHHH
Q psy2719 431 QIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQ-QLDVNHWMNSFLSSM 506 (808)
Q Consensus 431 ~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l~~l 506 (808)
+ .|+|+|+.+|..+.+. +|++++ |++++|++|.++++. ++.+++..+++++++. .++++..++++++.+
T Consensus 339 G----~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~ 411 (416)
T 2x6q_A 339 G----KPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKH-PEVSKEMGAKAKERVRKNFIITKHMERYLDIL 411 (416)
T ss_dssp T----CCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHH
T ss_pred C----CCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 6 5699999888888773 599997 999999999999984 5566666667777775 789999999999888
Q ss_pred Hcc
Q psy2719 507 GAL 509 (808)
Q Consensus 507 ~~~ 509 (808)
+++
T Consensus 412 ~~l 414 (416)
T 2x6q_A 412 NSL 414 (416)
T ss_dssp HTC
T ss_pred HHh
Confidence 765
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.3e-20 Score=206.59 Aligned_cols=203 Identities=15% Similarity=0.168 Sum_probs=154.7
Q ss_pred EEEEEEeecCcCccccchhhcCchhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcC
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAPENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVP 355 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~ 355 (808)
..++.++|+|+|++.|.+... ...+++ .++++|+++||+.+.||++.+++|++.+.++ +++ .|+++|.+
T Consensus 178 ~~~~~vi~ngv~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~----~l~i~G~g 250 (394)
T 2jjm_A 178 NKDIQTVYNFIDERVYFKRDM--TQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDA----KLLLVGDG 250 (394)
T ss_dssp SSCEEECCCCCCTTTCCCCCC--HHHHHHTTCC---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCC----EEEEECCC
T ss_pred cccEEEecCCccHHhcCCcch--HHHHHHcCCCCCCeEEEEeeccccccCHHHHHHHHHHHHhh-CCC----EEEEECCc
Confidence 457889999999998875421 222222 4568999999999999999999999998776 433 47777632
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCC
Q psy2719 356 SRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREP 435 (808)
Q Consensus 356 ~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~ 435 (808)
+. .+++++++.+.+.. ..|. +.|. .+++..+|+.||++|+||..||||++++|||||+
T Consensus 251 -----~~----~~~l~~~~~~~~l~------~~v~-~~g~--~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G---- 308 (394)
T 2jjm_A 251 -----PE----FCTILQLVKNLHIE------DRVL-FLGK--QDNVAELLAMSDLMLLLSEKESFGLVLLEAMACG---- 308 (394)
T ss_dssp -----TT----HHHHHHHHHTTTCG------GGBC-CCBS--CSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTT----
T ss_pred -----hH----HHHHHHHHHHcCCC------CeEE-EeCc--hhhHHHHHHhCCEEEeccccCCCchHHHHHHhcC----
Confidence 22 23445555444321 1233 4454 4789999999999999999999999999999996
Q ss_pred ceEEEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHHHcccc
Q psy2719 436 GVLILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSMGALDN 511 (808)
Q Consensus 436 g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~ 511 (808)
.|+|+|+.+|..+.+. +|++++|.|+++++++|.++++. ++.+.+..+++++++ ..++++..++.+++.++++.+
T Consensus 309 ~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 309 VPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp CCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC-
T ss_pred CCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 5699999988888884 59999999999999999999984 556666667778888 789999999999999988744
Q ss_pred c
Q psy2719 512 D 512 (808)
Q Consensus 512 ~ 512 (808)
.
T Consensus 388 ~ 388 (394)
T 2jjm_A 388 D 388 (394)
T ss_dssp -
T ss_pred h
Confidence 3
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.3e-21 Score=202.49 Aligned_cols=204 Identities=18% Similarity=0.235 Sum_probs=137.4
Q ss_pred CCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCC
Q psy2719 541 NCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMP 620 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~p 620 (808)
.+.++|++|+||||++ +++.++++++++|++|++ .
T Consensus 4 ~~~kli~~DlDGTLl~-----~~~~i~~~~~~al~~l~~----------------------------------------~ 38 (246)
T 2amy_A 4 PGPALCLFDVDGTLTA-----PRQKITKEMDDFLQKLRQ----------------------------------------K 38 (246)
T ss_dssp CCSEEEEEESBTTTBC-----TTSCCCHHHHHHHHHHTT----------------------------------------T
T ss_pred CCceEEEEECCCCcCC-----CCcccCHHHHHHHHHHHh----------------------------------------C
Confidence 3568999999999998 345799999999999965 3
Q ss_pred CCeEEEEeCCChhhHHHhcCcc----ceEEEcccceeEecCCCceeecCC----ChhHHHHHHHHHHHHHhh---c---c
Q psy2719 621 DVNIGIISGRTLENLMKMVNIE----KVTYAGSHGLEILHPDGTKFVHPV----PKEYAEKLRQLIKALQDE---V---C 686 (808)
Q Consensus 621 g~~v~I~SGR~~~~l~~~~~~~----~~~li~~nG~~i~~~~~~~~~~~~----~~~~~~~v~~i~~~~~~~---~---~ 686 (808)
+.|+|+|||++..+.+.++.. ..++|++||+.++..++..+..++ +.+ .++++++.+.+. . .
T Consensus 39 -i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~~~~~i~~~~l~~~l~~~---~~~~i~~~~~~~~~~~~~~~ 114 (246)
T 2amy_A 39 -IKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEA---LIQDLINYCLSYIAKIKLPK 114 (246)
T ss_dssp -SEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETTEEEEECCHHHHHCHH---HHHHHHHHHHHHHHHCCCSC
T ss_pred -CeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEeCCcEEEeeecccccCHH---HHHHHHHHHHhcCceEEEec
Confidence 889999999998888877731 247899999999875443454543 444 455555554432 1 1
Q ss_pred CCCcEEEecCcEEEEEc--CcCChh----h---H--HHHHHHHHHHH-Hhc---CeeEE-ccCeEEEEeCCCCCCHHHHH
Q psy2719 687 HDGAWIENKGVLLTFHY--RETPIE----R---R--EYIIDRASQIF-LEA---GFEPH-NALMAIEAKPPVKWDQGRAS 750 (808)
Q Consensus 687 ~~g~~ie~k~~~~~~~~--~~~~~~----~---~--~~~~~~~~~~~-~~~---~~~v~-~g~~~vEv~p~~~v~KG~av 750 (808)
..+.+++.+...+.+.. +..... + . .+..+.+.+.+ +.+ .+.+. ++..++||+|+ ++|||.|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~-~~~Kg~al 193 (246)
T 2amy_A 115 KRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPD-GWDKRYCL 193 (246)
T ss_dssp CCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTTSCEEEEEETTTEEEEEET-TCSGGGGG
T ss_pred CCceeEecccceeehhhhcCcCchhhhhhheeecCCHHHHHHHHHHHHHhcCCCcEEEEEcCCcEEEEecC-CCchHHHH
Confidence 23455544333222211 111111 0 0 01112222222 222 35554 57789999998 99999999
Q ss_pred HHHHHHhcCCCCCcceeEEEEe--------CHHHHHhccCCccEEEeCC-CCcccccccccc
Q psy2719 751 IHILRTMYGVDWSERVRIIYAG--------NEDAMLALQGIACTFRVDS-SPTVKSSWKQGS 803 (808)
Q Consensus 751 ~~ll~~~~~i~~~~~~~via~G--------D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~ 803 (808)
++| +|++.+ ++|||| |++||+.++. .+++|+| .+++|+.|+||+
T Consensus 194 ~~l----~~i~~~---~viafGD~~~~~~ND~~Ml~~a~~--ag~av~Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 194 RHV----ENDGYK---TIYFFGDKTMPGGNDHEIFTDPRT--MGYSVTAPEDTRRICELLFS 246 (246)
T ss_dssp GGT----TTSCCS---EEEEEECSCC---CCCHHHHCTTE--EEEECSSHHHHHHHHHHHCC
T ss_pred HHH----hCCCHH---HEEEECCCCCCCCCcHHHHHhCCc--ceEEeeCCCHHHHHHHhhcC
Confidence 998 577765 899999 6999998852 2599998 589999999985
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.3e-21 Score=202.04 Aligned_cols=200 Identities=16% Similarity=0.202 Sum_probs=142.0
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|+||+||||++ +...++++++++|+++.++ |+
T Consensus 5 ~kli~fDlDGTLl~-----~~~~i~~~~~~al~~l~~~----------------------------------------G~ 39 (274)
T 3fzq_A 5 YKLLILDIDGTLRD-----EVYGIPESAKHAIRLCQKN----------------------------------------HC 39 (274)
T ss_dssp CCEEEECSBTTTBB-----TTTBCCHHHHHHHHHHHHT----------------------------------------TC
T ss_pred ceEEEEECCCCCCC-----CCCcCCHHHHHHHHHHHHC----------------------------------------CC
Confidence 36999999999998 3457999999999999887 99
Q ss_pred eEEEEeCCChhhHHHhcCc-cceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhc------cCCCcEEEec
Q psy2719 623 NIGIISGRTLENLMKMVNI-EKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEV------CHDGAWIENK 695 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~-~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~------~~~g~~ie~k 695 (808)
.|+++|||+...+..++.. ....++++||+.++..++..+...++.+ .+.++++.+.+.- ...+.+....
T Consensus 40 ~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 116 (274)
T 3fzq_A 40 SVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLYNQSFNQR---LIKEVVCLLKKREVAFSIESQEKVFMNQK 116 (274)
T ss_dssp EEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEEEECCCCHH---HHHHHHHHHHHHTCEEEEECSSCEEECHH
T ss_pred EEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEEEEcCCCHH---HHHHHHHHHHHCCceEEEEeCCceEeCCc
Confidence 9999999999887776632 2235799999999875544566677765 4666666665530 1111221100
Q ss_pred ----------------------------------------CcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeE-EccC-
Q psy2719 696 ----------------------------------------GVLLTFHYRETPIERREYIIDRASQIFLEAGFEP-HNAL- 733 (808)
Q Consensus 696 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~g~- 733 (808)
-..+.+. .++ +..+.+.+.+... +.+ .++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~---~~~----~~~~~~~~~l~~~-~~~~~~~~~ 188 (274)
T 3fzq_A 117 AKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKICLW---SNE----KVFDEVKDILQDK-MELAQRDIS 188 (274)
T ss_dssp HHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCSSCCCCEEEEE---CCH----HHHHHHHHHHGGG-EEEEEEEGG
T ss_pred hHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhcccCeEEEEEE---cCH----HHHHHHHHHhhcc-eEEEeccCC
Confidence 0011111 111 1223333333321 333 4454
Q ss_pred -eEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 734 -MAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 734 -~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
.++||.|+ +++||.|+++++++ +|++++ ++++|| |++||+.+| ++|+|+| .+++|+.|+|+++++
T Consensus 189 ~~~~ei~~~-~~~K~~~l~~l~~~-lgi~~~---~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~~A~~v~~~~ 259 (274)
T 3fzq_A 189 SQYYEIIQK-DFHKGKAIKRLQER-LGVTQK---ETICFGDGQNDIVMFQASD---VTIAMKNSHQQLKDIATSICEDI 259 (274)
T ss_dssp GTEEEEEET-TCSHHHHHHHHHHH-HTCCST---TEEEECCSGGGHHHHHTCS---EEEEETTSCHHHHHHCSEEECCG
T ss_pred CceEEEeeC-CCCHHHHHHHHHHH-cCCCHH---HEEEECCChhHHHHHHhcC---ceEEecCccHHHHHhhhheeCCC
Confidence 89999998 99999999999997 899976 799999 999999994 5699997 688999999999876
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-20 Score=198.58 Aligned_cols=207 Identities=14% Similarity=0.261 Sum_probs=143.7
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHH-HHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEET-KRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~-~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
.++|++|+||||++ +...+++++ +++|++|+++ |
T Consensus 3 ~kli~~DlDGTLl~-----~~~~i~~~~~~~al~~l~~~----------------------------------------G 37 (271)
T 1rlm_A 3 VKVIVTDMDGTFLN-----DAKTYNQPRFMAQYQELKKR----------------------------------------G 37 (271)
T ss_dssp CCEEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHHH----------------------------------------T
T ss_pred ccEEEEeCCCCCCC-----CCCcCCHHHHHHHHHHHHHC----------------------------------------C
Confidence 36999999999998 345789985 9999999887 9
Q ss_pred CeEEEEeCCChhhHHHhcCc--cceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhc-------cCCCcEE
Q psy2719 622 VNIGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEV-------CHDGAWI 692 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-------~~~g~~i 692 (808)
+.|+|+|||++..+.+++.. ...++|++||+.++..++..+..+++.+ .++++++.+.+.. ...+.++
T Consensus 38 ~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~ 114 (271)
T 1rlm_A 38 IKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRH---ESRIVIGELLKDKQLNFVACGLQSAYV 114 (271)
T ss_dssp CEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCCHH---HHHHHHHHHHTCTTCEEEEEESSCEEE
T ss_pred CEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCeEEEEecCCHH---HHHHHHHHHHhCCCccEEEEeCCCEEe
Confidence 99999999999999888753 2358999999999875444555677764 5667777665430 0122232
Q ss_pred EecC----------c--EEEE--EcCc-----------CChhhHHHHHHHHHHHHHhcCeeE-EccCeEEEEeCCCCCCH
Q psy2719 693 ENKG----------V--LLTF--HYRE-----------TPIERREYIIDRASQIFLEAGFEP-HNALMAIEAKPPVKWDQ 746 (808)
Q Consensus 693 e~k~----------~--~~~~--~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~v-~~g~~~vEv~p~~~v~K 746 (808)
.... . .+.. .+.. .++.....+.+.+.+.+.. .+.+ .++..++||.|+ +++|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~-~~~K 192 (271)
T 1rlm_A 115 SENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDG-IMKPVTSGFGFIDLIIP-GLHK 192 (271)
T ss_dssp ETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHHHHHHHHHHTTT-SSEEEECSTTEEEEECT-TCSH
T ss_pred eCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEEEcCHHHHHHHHHHHHHHcCC-cEEEEeccCCeEEEEcC-CCCh
Confidence 1100 0 0000 0000 0111111222222222211 2554 567789999998 9999
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
|.+++.++++ +|++.+ ++++|| |++|++.++ ++|+|+| .+++|+.|+|+++++
T Consensus 193 ~~~~~~l~~~-l~i~~~---~~~~~GD~~nD~~m~~~ag---~~va~~na~~~~k~~a~~v~~~~ 250 (271)
T 1rlm_A 193 ANGISRLLKR-WDLSPQ---NVVAIGDSGNDAEMLKMAR---YSFAMGNAAENIKQIARYATDDN 250 (271)
T ss_dssp HHHHHHHHHH-HTCCGG---GEEEEECSGGGHHHHHHCS---EEEECTTCCHHHHHHCSEECCCG
T ss_pred HHHHHHHHHH-hCCCHH---HEEEECCcHHHHHHHHHcC---CeEEeCCccHHHHHhCCeeCcCC
Confidence 9999999997 899875 799999 999999994 4699997 578999999999875
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-20 Score=195.46 Aligned_cols=206 Identities=13% Similarity=0.130 Sum_probs=138.7
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|+||+||||++. ...++++++++|++++++ |+
T Consensus 3 ~kli~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~----------------------------------------G~ 37 (258)
T 2pq0_A 3 RKIVFFDIDGTLLDE-----QKQLPLSTIEAVRRLKQS----------------------------------------GV 37 (258)
T ss_dssp CCEEEECTBTTTBCT-----TSCCCHHHHHHHHHHHHT----------------------------------------TC
T ss_pred ceEEEEeCCCCCcCC-----CCccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 369999999999983 357999999999999988 99
Q ss_pred eEEEEeCCChhhHHHhcCccc-eEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhc-----cC-CCcEEEec
Q psy2719 623 NIGIISGRTLENLMKMVNIEK-VTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEV-----CH-DGAWIENK 695 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~~~-~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-----~~-~g~~ie~k 695 (808)
.|+++|||+...+..++...+ ..+++.||+.+...++..+..+++.+ .++++++.+.+.- .+ .+.+....
T Consensus 38 ~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 114 (258)
T 2pq0_A 38 YVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQPLRRE---KVRALTEEAHKNGHPLVFMDAEKMRASIG 114 (258)
T ss_dssp EEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEECCCCHH---HHHHHHHHHHHTTCCEEEECSSCEEESSS
T ss_pred EEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEecCCHH---HHHHHHHHHHhCCCeEEEEeCCcEEEecC
Confidence 999999999887766553111 13789999999875444455667654 5677777766530 01 11111100
Q ss_pred C-cEE-------EEEcCcCChhh-------------HHHHHHHHHHHHHhcCeeE-EccCeEEEEeCCCCCCHHHHHHHH
Q psy2719 696 G-VLL-------TFHYRETPIER-------------REYIIDRASQIFLEAGFEP-HNALMAIEAKPPVKWDQGRASIHI 753 (808)
Q Consensus 696 ~-~~~-------~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~v-~~g~~~vEv~p~~~v~KG~av~~l 753 (808)
. ..+ ...+....+.+ ..+....+.+.+. .+.+ .+++.++||.|+ ++|||.|++.+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ei~~~-~~~K~~~l~~l 191 (258)
T 2pq0_A 115 DHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAEEEEPYVRNYP--EFRFVRWHDVSTDVLPA-GGSKAEGIRMM 191 (258)
T ss_dssp SCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHHHHHHHHHHCT--TEEEEEEETTEEEEEES-SCCHHHHHHHH
T ss_pred CcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHHHHHHHHHhCC--CeEEEEeCCceEEEEEC-CCChHHHHHHH
Confidence 0 000 00000000000 0011111111111 3443 456789999998 99999999999
Q ss_pred HHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 754 LRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 754 l~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+++ +|++.+ +++||| |++||+.++ ++|+|+| .+++|+.|+|+++++
T Consensus 192 ~~~-lgi~~~---~~ia~GDs~NDi~ml~~ag---~~vam~na~~~~k~~A~~v~~~~ 242 (258)
T 2pq0_A 192 IEK-LGIDKK---DVYAFGDGLNDIEMLSFVG---TGVAMGNAHEEVKRVADFVTKPV 242 (258)
T ss_dssp HHH-HTCCGG---GEEEECCSGGGHHHHHHSS---EEEEETTCCHHHHHTCSEEECCG
T ss_pred HHH-hCCCHH---HEEEECCcHHhHHHHHhCC---cEEEeCCCcHHHHHhCCEEeCCC
Confidence 997 899975 799999 999999994 5699997 588999999999875
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-20 Score=188.09 Aligned_cols=184 Identities=20% Similarity=0.234 Sum_probs=141.7
Q ss_pred eecCcCccccc--hhhcC----chhhhhc---CCCeEEEEEcCcc-ccCChHHHHHHHHHHH--HhCCCccCcEEEEEEE
Q psy2719 286 LPIGIPFERFV--QLAEN----APENLKD---ENLKVILGVDRLD-YTKGLVHRIKAFERLL--EKHPEYVEKVTFLQIS 353 (808)
Q Consensus 286 ~p~GID~~~f~--~~~~~----~~~~~~~---~~~~iil~V~Rl~-~~KGi~~~l~A~~~ll--~~~p~~~~~v~lv~ig 353 (808)
+|+|||++.|. +.... ....+++ .+.++|+++||+. +.||++.+++|+..+. +++|++ .|+++|
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~----~l~i~G 77 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEM----RFIIIG 77 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGE----EEEEEC
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCe----EEEEEC
Confidence 69999999998 64310 1223333 4667999999999 9999999999999987 776654 577777
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccC
Q psy2719 354 VPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIR 433 (808)
Q Consensus 354 ~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~ 433 (808)
.+. + +..+++++++.+.+ .|+++.|.++.+++..+|+.||++|+||..||||++++|||||+
T Consensus 78 ~~~----~---~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G-- 139 (200)
T 2bfw_A 78 KGD----P---ELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG-- 139 (200)
T ss_dssp CBC----H---HHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT--
T ss_pred CCC----h---HHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCC--
Confidence 422 1 23445556655543 35543899999999999999999999999999999999999995
Q ss_pred CCceEEEcCCCCCcccc-C-ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcC
Q psy2719 434 EPGVLILSPFAGAGGMM-H-EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQL 493 (808)
Q Consensus 434 ~~g~vVlS~~~G~~~~l-~-~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~ 493 (808)
.|+|+|+.+|..+.+ . .|++++|.|+++++++|.++++|.+++++++.+++++++.++
T Consensus 140 --~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~f 199 (200)
T 2bfw_A 140 --AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 199 (200)
T ss_dssp --CEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred --CCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 679999988888877 2 599999999999999999999866777777766777666543
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.5e-21 Score=201.28 Aligned_cols=201 Identities=14% Similarity=0.222 Sum_probs=135.4
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|++|+||||++ +...++++++++|++|+++ |+
T Consensus 4 ~kli~~DlDGTLl~-----~~~~i~~~~~~~l~~l~~~----------------------------------------g~ 38 (246)
T 3f9r_A 4 RVLLLFDVDGTLTP-----PRLCQTDEMRALIKRARGA----------------------------------------GF 38 (246)
T ss_dssp SEEEEECSBTTTBS-----TTSCCCHHHHHHHHHHHHT----------------------------------------TC
T ss_pred ceEEEEeCcCCcCC-----CCCccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 57999999999998 3457999999999999988 99
Q ss_pred eEEEEeCCChhhHHHhcCcc----ceEEEcccceeEecCCCceeecC----CChhHHHHHHHHHHHHHhhc---cCCCcE
Q psy2719 623 NIGIISGRTLENLMKMVNIE----KVTYAGSHGLEILHPDGTKFVHP----VPKEYAEKLRQLIKALQDEV---CHDGAW 691 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~~----~~~li~~nG~~i~~~~~~~~~~~----~~~~~~~~v~~i~~~~~~~~---~~~g~~ 691 (808)
.|+|+|||++..+.+.++.. ..++|++||+.++..++..+..+ ++.+....+.+.++.+.... ...+.|
T Consensus 39 ~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 118 (246)
T 3f9r_A 39 CVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTF 118 (246)
T ss_dssp EEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEETTEEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCC
T ss_pred EEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEECCEEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceE
Confidence 99999999999998888742 24789999999998755456555 44553333333332222111 234677
Q ss_pred EEecCcEEEEE--cCcCChh----h---HHH--HHHHHHHHH-Hhc---Cee-EEccCeEEEEeCCCCCCHHHHHHHHHH
Q psy2719 692 IENKGVLLTFH--YRETPIE----R---REY--IIDRASQIF-LEA---GFE-PHNALMAIEAKPPVKWDQGRASIHILR 755 (808)
Q Consensus 692 ie~k~~~~~~~--~~~~~~~----~---~~~--~~~~~~~~~-~~~---~~~-v~~g~~~vEv~p~~~v~KG~av~~ll~ 755 (808)
++.+...+.+. .+..... + ..+ ..+.+.+.+ +.+ .+. +.+++.++||+|+ ++|||.||++|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~sg~~~leI~~~-gv~Kg~al~~L~~ 197 (246)
T 3f9r_A 119 VEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIAELENSFPDFGLKYSIGGQISFDVFPV-GWDKTYCLQFVED 197 (246)
T ss_dssp EEECSSCEEECSSCTTSCHHHHHHHHHHHHHHCHHHHHHHHHHHHCGGGCEEEEEETTTEEEEEET-TCSGGGGGGGTTT
T ss_pred EEeecceeccccccccCchhhceeeeEecccchHHHHHHHHHHhhCcCCcEEEEecCCeEEEEEeC-CCCHHHHHHHHHc
Confidence 77766544432 1111110 0 000 112222222 223 255 4689999999998 9999999999886
Q ss_pred HhcCCCCCcceeEEEEeC--------HHHHHhccCCccEEEeCCC-Ccccccc
Q psy2719 756 TMYGVDWSERVRIIYAGN--------EDAMLALQGIACTFRVDSS-PTVKSSW 799 (808)
Q Consensus 756 ~~~~i~~~~~~~via~GD--------~~Mf~~~~~~~~~vav~~~-~~vk~~A 799 (808)
+.+ ++||||| ++||++++. ++++|+|+ +.+|..+
T Consensus 198 -----~~~---ev~afGD~~~~g~NDi~Ml~~a~~--~g~~v~n~~~~~~~~~ 240 (246)
T 3f9r_A 198 -----DFE---EIHFFGDKTQEGGNDYEIYTDKRT--IGHKVTSYKDTIAEVE 240 (246)
T ss_dssp -----TCS---EEEEEESCCSTTSTTHHHHTCTTS--EEEECSSHHHHHHHHH
T ss_pred -----Ccc---cEEEEeCCCCCCCCCHHHHhCCCc--cEEEeCCHHHHHHHHH
Confidence 332 8999994 999998853 34899985 4455443
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=200.71 Aligned_cols=208 Identities=16% Similarity=0.163 Sum_probs=140.6
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.|+|++|+||||++ ++..++++++++|++|+++ |+
T Consensus 5 ~kli~~DlDGTLl~-----~~~~i~~~~~~aL~~l~~~----------------------------------------Gi 39 (282)
T 1rkq_A 5 IKLIAIDMDGTLLL-----PDHTISPAVKNAIAAARAR----------------------------------------GV 39 (282)
T ss_dssp CCEEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHT----------------------------------------TC
T ss_pred ceEEEEeCCCCCCC-----CCCcCCHHHHHHHHHHHHC----------------------------------------CC
Confidence 36999999999998 3457999999999999987 99
Q ss_pred eEEEEeCCChhhHHHhcC---cc--ceEEEcccceeEecC--CCceeecCCChhHHHHHHHHHHHHHhh---c--c-CCC
Q psy2719 623 NIGIISGRTLENLMKMVN---IE--KVTYAGSHGLEILHP--DGTKFVHPVPKEYAEKLRQLIKALQDE---V--C-HDG 689 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~---~~--~~~li~~nG~~i~~~--~~~~~~~~~~~~~~~~v~~i~~~~~~~---~--~-~~g 689 (808)
.|+|+|||++..+..++. .. +.++|++||+.++.+ ++..+..+++.++ ++++++.+.+. . . ..+
T Consensus 40 ~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~~---~~~i~~~~~~~~~~~~~~~~~~ 116 (282)
T 1rkq_A 40 NVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDD---YRFLEKLSREVGSHFHALDRTT 116 (282)
T ss_dssp EEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHH---HHHHHHHHHHHTCEEEEECSSC
T ss_pred EEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCCeEEEEecCCHHH---HHHHHHHHHHcCCEEEEEECCE
Confidence 999999999988877653 22 236899999999873 3334666777764 44555544432 0 1 122
Q ss_pred cEEEecC---c--------EEEEE---cCcCC--hhh-------HHHHHHHHHHHHH-hc--CeeE-EccCeEEEEeCCC
Q psy2719 690 AWIENKG---V--------LLTFH---YRETP--IER-------REYIIDRASQIFL-EA--GFEP-HNALMAIEAKPPV 742 (808)
Q Consensus 690 ~~ie~k~---~--------~~~~~---~~~~~--~~~-------~~~~~~~~~~~~~-~~--~~~v-~~g~~~vEv~p~~ 742 (808)
.+...+. . .+... +.... ... ..+..+++.+.+. .+ .+.+ .++..++||.|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~- 195 (282)
T 1rkq_A 117 LYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDK- 195 (282)
T ss_dssp EEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEET-
T ss_pred EEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEecCC-
Confidence 3332110 0 00000 00000 000 0111222222221 12 3554 477889999998
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+++||.|++.++++ +|++.+ ++++|| |++||+.++ ++|+|+| .+++|+.|+|+++++
T Consensus 196 ~~~K~~~l~~l~~~-~~~~~~---~~~~~GD~~nD~~m~~~ag---~~va~~n~~~~~~~~a~~v~~~~ 257 (282)
T 1rkq_A 196 RVNKGTGVKSLADV-LGIKPE---EIMAIGDQENDIAMIEYAG---VGVAVDNAIPSVKEVANFVTKSN 257 (282)
T ss_dssp TCSHHHHHHHHHHH-HTCCGG---GEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCSEECCCT
T ss_pred CCCCHHHHHHHHHH-hCCCHH---HEEEECCcHHHHHHHHHCC---cEEEecCCcHHHHhhCCEEecCC
Confidence 99999999999997 899865 799999 999999994 4699997 578999999999865
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-19 Score=201.73 Aligned_cols=200 Identities=17% Similarity=0.215 Sum_probs=158.9
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCc-cccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRL-DYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl-~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~ 359 (808)
.++ ++|+|+|.+.|.+.... .... .++++|+++||+ .+.||++.+++|+..+.+++|++ .|+++|.+.
T Consensus 182 ~~~-vi~~~v~~~~~~~~~~~-~~~~--~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~----~l~i~G~~~--- 250 (406)
T 2gek_A 182 DAV-EIPNGVDVASFADAPLL-DGYP--REGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDV----EILIVGRGD--- 250 (406)
T ss_dssp CEE-ECCCCBCHHHHHTCCCC-TTCS--CSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTC----EEEEESCSC---
T ss_pred CcE-EecCCCChhhcCCCchh-hhcc--CCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCe----EEEEEcCCc---
Confidence 367 99999999888654321 1111 356799999999 99999999999999999888876 377776432
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC-CCCCChhHHHHHHhccCCCceE
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL-RDGMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~-~EG~gLv~~Eama~~~~~~g~v 438 (808)
. +++++++.++. .. +.+.|.++.+++..+|+.||++|+||. .||||++++|||||+ .|+
T Consensus 251 --~-----~~l~~~~~~~~--------~~-v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G----~Pv 310 (406)
T 2gek_A 251 --E-----DELREQAGDLA--------GH-LRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAG----TAV 310 (406)
T ss_dssp --H-----HHHHHHTGGGG--------GG-EEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHT----CEE
T ss_pred --H-----HHHHHHHHhcc--------Cc-EEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcC----CCE
Confidence 2 23344443331 12 446799999999999999999999997 999999999999995 679
Q ss_pred EEcCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHccccc
Q psy2719 439 ILSPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALDND 512 (808)
Q Consensus 439 VlS~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 512 (808)
|+|+.+|..+.+. .|++++|.|+++++++|.++++. ++.+.+..+++++++..++++..++.+++.++++.+.
T Consensus 311 I~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 311 VASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILED-DQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp EECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCT
T ss_pred EEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9999888887774 49999999999999999999984 5566666677888888899999999999999887544
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-20 Score=199.06 Aligned_cols=201 Identities=13% Similarity=0.170 Sum_probs=127.4
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|++|+||||++. ...++++++++|++|+++ |+
T Consensus 9 ~~li~~DlDGTLl~~-----~~~~~~~~~~~l~~l~~~----------------------------------------G~ 43 (275)
T 1xvi_A 9 PLLVFSDLDGTLLDS-----HSYDWQPAAPWLTRLREA----------------------------------------NV 43 (275)
T ss_dssp CEEEEEECTTTTSCS-----SCCSCCTTHHHHHHHHHT----------------------------------------TC
T ss_pred ceEEEEeCCCCCCCC-----CCcCCHHHHHHHHHHHHC----------------------------------------CC
Confidence 579999999999983 235677889999999887 99
Q ss_pred eEEEEeCCChhhHHHhcC---ccceEEEcccceeEe-cCCC------ceeecCCChhHHHHHHHHHHHHHhhccCCCcEE
Q psy2719 623 NIGIISGRTLENLMKMVN---IEKVTYAGSHGLEIL-HPDG------TKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWI 692 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~---~~~~~li~~nG~~i~-~~~~------~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~i 692 (808)
.|+|+|||++..+..++. ....++|++||+.++ ..++ ..+..+++.+ .++++++.+.+.. ...+.
T Consensus 44 ~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~---~~~~i~~~~~~~~--~~~~~ 118 (275)
T 1xvi_A 44 PVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHG---EISLVLNTLREKE--HFKFT 118 (275)
T ss_dssp CEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHH---HHHHHHHHHHHHH--CCCEE
T ss_pred eEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHH---HHHHHHHHHHHhh--Cccee
Confidence 999999999998887764 222269999999998 4322 2355677764 4555555543320 00010
Q ss_pred Ee------------------------cCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHH
Q psy2719 693 EN------------------------KGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGR 748 (808)
Q Consensus 693 e~------------------------k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~ 748 (808)
.. +.......+.. +++ ..+.+.+.+...++.+..+..++||+|+ +++||.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~l~~~~~~~~~~~~~leI~~~-~~~K~~ 192 (275)
T 1xvi_A 119 TFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRD-SDE----RMAQFTARLNELGLQFMQGARFWHVLDA-SAGKDQ 192 (275)
T ss_dssp EGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECS-CHH----HHHHHHHHHHHTTEEEEECSSCEEEEET-TCCHHH
T ss_pred ccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecC-CHH----HHHHHHHHHHhhCeEEEECCceEEEecC-CCCHHH
Confidence 00 01111122211 111 2233333344345666666778999998 999999
Q ss_pred HHHHHHHHhcC-CCCCccee--EEEEe----CHHHHHhccCCccEEEeCCC----Cccccc--cc-cccCcC
Q psy2719 749 ASIHILRTMYG-VDWSERVR--IIYAG----NEDAMLALQGIACTFRVDSS----PTVKSS--WK-QGSNHT 806 (808)
Q Consensus 749 av~~ll~~~~~-i~~~~~~~--via~G----D~~Mf~~~~~~~~~vav~~~----~~vk~~--A~-~~~~~~ 806 (808)
|++.++++ +| ++.+ + +++|| |++||+.++ ++|+|+|. +++|+. |+ |+++++
T Consensus 193 ~l~~l~~~-~~~~~~~---~~~~~~~GD~~nD~~m~~~ag---~~va~~n~~~~~~~~~~~~~a~~~v~~~~ 257 (275)
T 1xvi_A 193 AANWIIAT-YQQLSGK---RPTTLGLGDGPNDAPLLEVMD---YAVIVKGLNREGVHLHDEDPARVWRTQRE 257 (275)
T ss_dssp HHHHHHHH-HHHHHSS---CCEEEEEESSGGGHHHHHTSS---EEEECCCCC--------------------
T ss_pred HHHHHHHH-hhhcccc---cCcEEEECCChhhHHHHHhCC---ceEEecCCCccchhhccccCCceeEccCC
Confidence 99999997 78 8765 6 99999 999999984 56999974 577764 78 998764
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.84 E-value=5.1e-20 Score=194.83 Aligned_cols=205 Identities=17% Similarity=0.185 Sum_probs=139.4
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
|+|++|+||||++ +...++++++++|++ ++. |+.
T Consensus 3 kli~~DlDGTLl~-----~~~~i~~~~~~al~~-~~~----------------------------------------Gi~ 36 (268)
T 1nf2_A 3 RVFVFDLDGTLLN-----DNLEISEKDRRNIEK-LSR----------------------------------------KCY 36 (268)
T ss_dssp CEEEEECCCCCSC-----TTSCCCHHHHHHHHH-HTT----------------------------------------TSE
T ss_pred cEEEEeCCCcCCC-----CCCccCHHHHHHHHH-HhC----------------------------------------CCE
Confidence 6899999999998 345799999999999 877 999
Q ss_pred EEEEeCCChhhHHHhcC---ccceEEEcccceeEecC-CCceeecCCChhHHHHHHHHHHHHHhhc------cCCCcEEE
Q psy2719 624 IGIISGRTLENLMKMVN---IEKVTYAGSHGLEILHP-DGTKFVHPVPKEYAEKLRQLIKALQDEV------CHDGAWIE 693 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~---~~~~~li~~nG~~i~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~------~~~g~~ie 693 (808)
|+|+|||+...+..++. ....++|++||+.++.+ ++..+..+++.+ .++++++.+.+.- ...+.++.
T Consensus 37 v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~ 113 (268)
T 1nf2_A 37 VVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPE---VAKDIIEYIKPLNVHWQAYIDDVLYSE 113 (268)
T ss_dssp EEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEEECCBCHH---HHHHHHHHHGGGCCCEEEECSSCEEES
T ss_pred EEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCCEEEecCCCHH---HHHHHHHHHHhCCCEEEEEECCEEEEC
Confidence 99999999998877764 22126899999999874 333455677765 4556666665420 11222322
Q ss_pred ecCc---------EEEEE-cCcCChhhH-------------HHHHHHHHHHHH-hc--CeeE-EccCeEEEEeCCCCCCH
Q psy2719 694 NKGV---------LLTFH-YRETPIERR-------------EYIIDRASQIFL-EA--GFEP-HNALMAIEAKPPVKWDQ 746 (808)
Q Consensus 694 ~k~~---------~~~~~-~~~~~~~~~-------------~~~~~~~~~~~~-~~--~~~v-~~g~~~vEv~p~~~v~K 746 (808)
.+.. .+... +... .+.. .+..+++.+.+. .+ .+.+ .++..++||.|+ +++|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~-~~~K 191 (268)
T 1nf2_A 114 KDNEEIKSYARHSNVDYRVEPNL-SELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPK-NVDK 191 (268)
T ss_dssp SCCHHHHHHHHHTTCCEEECTTH-HHHHHHHCBSEEEEECCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECT-TCCH
T ss_pred CChHHHHHHHhhcCCceEecCCH-HHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEecCceEEEeCC-CCCh
Confidence 1100 00000 0000 0000 011222222222 12 3554 467789999998 9999
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
|.+++.++++ +|++++ ++++|| |++|++.++ ++|+|+| .+++|+.|+|+++++
T Consensus 192 ~~~~~~~~~~-~~~~~~---~~~~~GD~~nD~~~~~~ag---~~v~~~n~~~~~~~~a~~v~~~~ 249 (268)
T 1nf2_A 192 GKALRFLRER-MNWKKE---EIVVFGDNENDLFMFEEAG---LRVAMENAIEKVKEASDIVTLTN 249 (268)
T ss_dssp HHHHHHHHHH-HTCCGG---GEEEEECSHHHHHHHTTCS---EEEECTTSCHHHHHHCSEECCCT
T ss_pred HHHHHHHHHH-cCCCHH---HeEEEcCchhhHHHHHHcC---CEEEecCCCHHHHhhCCEEEccC
Confidence 9999999997 899865 799999 999999984 4699997 578999999999875
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.4e-20 Score=198.85 Aligned_cols=209 Identities=13% Similarity=0.092 Sum_probs=141.2
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|++|+||||++.. +..++++++++|++|+++ |+
T Consensus 27 ikli~~DlDGTLl~~~----~~~is~~~~~al~~l~~~----------------------------------------Gi 62 (301)
T 2b30_A 27 IKLLLIDFDGTLFVDK----DIKVPSENIDAIKEAIEK----------------------------------------GY 62 (301)
T ss_dssp CCEEEEETBTTTBCCT----TTCSCHHHHHHHHHHHHH----------------------------------------TC
T ss_pred ccEEEEECCCCCcCCC----CCccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 4799999999999831 457999999999999987 99
Q ss_pred eEEEEeCCChhhHHHhc--Cccc------eEEEcccceeEecC-CCceeecCCChhHHHHHHHHHHHHHhh----c--c-
Q psy2719 623 NIGIISGRTLENLMKMV--NIEK------VTYAGSHGLEILHP-DGTKFVHPVPKEYAEKLRQLIKALQDE----V--C- 686 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~--~~~~------~~li~~nG~~i~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~----~--~- 686 (808)
.|+|+|||++..+..++ ...+ .++|++||+.++.+ ++..+..+++.+ .++++++.+.+. . .
T Consensus 63 ~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~ 139 (301)
T 2b30_A 63 MVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETD---VYAELISYLVEKNLVNQTIFH 139 (301)
T ss_dssp EEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEECTTCCEEEECCCCHH---HHHHHHHHHHHTTCGGGEEEE
T ss_pred EEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeEEEeCCCCEEEEccCCHH---HHHHHHHHHHHcCCceEEEEE
Confidence 99999999998887776 4212 46899999999874 434556677765 455555555432 0 0
Q ss_pred -CCCcEEEecC-cE--------EEEEcCcCChhh-------------HHHHHHHHHHHHH-hc--CeeE-EccCeEEEEe
Q psy2719 687 -HDGAWIENKG-VL--------LTFHYRETPIER-------------REYIIDRASQIFL-EA--GFEP-HNALMAIEAK 739 (808)
Q Consensus 687 -~~g~~ie~k~-~~--------~~~~~~~~~~~~-------------~~~~~~~~~~~~~-~~--~~~v-~~g~~~vEv~ 739 (808)
..+.+++... .. ..++++..+.++ ..+..+.+.+.+. .+ ++.+ .++..++||+
T Consensus 140 ~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~ 219 (301)
T 2b30_A 140 RGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVT 219 (301)
T ss_dssp ETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEE
T ss_pred eCCEEEEcCchHHHHHHHHhhccCCceeecchhhhccCCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEeCCcceEec
Confidence 1112221110 00 000000000000 0001122222222 22 4665 4677899999
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccC-cC
Q psy2719 740 PPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSN-HT 806 (808)
Q Consensus 740 p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~-~~ 806 (808)
|+ +++||.|++.++++ +|++.+ ++++|| |++||+.++ ++|+|+| .+++|+.|+|+++ ++
T Consensus 220 ~~-~~~K~~~l~~l~~~-~~~~~~---~~~~~GD~~nD~~m~~~ag---~~va~~na~~~~k~~a~~v~~~~~ 284 (301)
T 2b30_A 220 KL-GHDKYTGINYLLKH-YNISND---QVLVVGDAENDIAMLSNFK---YSFAVANATDSAKSHAKCVLPVSH 284 (301)
T ss_dssp ET-TCCHHHHHHHHHHH-TTCCGG---GEEEEECSGGGHHHHHSCS---EEEECTTCCHHHHHHSSEECSSCT
T ss_pred CC-CCCcHHHHHHHHHH-cCCCHH---HEEEECCCHHHHHHHHHcC---CeEEEcCCcHHHHhhCCEEEccCC
Confidence 98 99999999999997 899865 799999 999999984 5699997 5789999999998 65
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.1e-20 Score=203.56 Aligned_cols=202 Identities=16% Similarity=0.205 Sum_probs=156.6
Q ss_pred EEEEEEeecCcCccccchhhcCc--hhhhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHh-CCCccCcEEEEEE
Q psy2719 280 TVHVKALPIGIPFERFVQLAENA--PENLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEK-HPEYVEKVTFLQI 352 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~--~~~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~-~p~~~~~v~lv~i 352 (808)
..++.++|+|+|.+.|.+..... ..++++ .++++|+++||+.+.||++.+++|++.+.++ .|+ +.|+++
T Consensus 159 ~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~ 234 (374)
T 2iw1_A 159 PERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVV 234 (374)
T ss_dssp GGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEE
T ss_pred hhheEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCc----eEEEEE
Confidence 45788999999999887643211 122222 4678999999999999999999999988665 454 458877
Q ss_pred EcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhcc
Q psy2719 353 SVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQI 432 (808)
Q Consensus 353 g~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~ 432 (808)
|.+. . +++++++.+.+.. ..|.+ .|+ .+++..+|+.||++|+||..||||++++|||||+
T Consensus 235 G~g~---~-------~~~~~~~~~~~~~------~~v~~-~g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G- 294 (374)
T 2iw1_A 235 GQDK---P-------RKFEALAEKLGVR------SNVHF-FSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG- 294 (374)
T ss_dssp SSSC---C-------HHHHHHHHHHTCG------GGEEE-ESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT-
T ss_pred cCCC---H-------HHHHHHHHHcCCC------CcEEE-CCC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCC-
Confidence 7532 1 2234444444321 13554 455 4689999999999999999999999999999996
Q ss_pred CCCceEEEcCCCCCccccC---ceEEEC-CCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 433 REPGVLILSPFAGAGGMMH---EALLVN-PYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 433 ~~~g~vVlS~~~G~~~~l~---~~llvn-P~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
.|+|+|+.+|..+.+. +|++++ |.|+++++++|.++++ +++.+.+..+++++.+.++++..|++.+.+.++.
T Consensus 295 ---~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 295 ---LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp ---CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred ---CCEEEecCCCchhhhccCCceEEeCCCCCHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 5699999988888773 599998 9999999999999998 4566666777788899999999999999888876
Q ss_pred c
Q psy2719 509 L 509 (808)
Q Consensus 509 ~ 509 (808)
.
T Consensus 371 ~ 371 (374)
T 2iw1_A 371 G 371 (374)
T ss_dssp C
T ss_pred h
Confidence 4
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-19 Score=190.87 Aligned_cols=207 Identities=15% Similarity=0.189 Sum_probs=143.0
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
++|+||+||||++. +..++++++++|+++++. |+.
T Consensus 5 kli~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~----------------------------------------G~~ 39 (288)
T 1nrw_A 5 KLIAIDLDGTLLNS-----KHQVSLENENALRQAQRD----------------------------------------GIE 39 (288)
T ss_dssp CEEEEECCCCCSCT-----TSCCCHHHHHHHHHHHHT----------------------------------------TCE
T ss_pred EEEEEeCCCCCCCC-----CCccCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 68999999999983 457899999999999887 999
Q ss_pred EEEEeCCChhhHHHhcCcc--ceEEEcccceeEecC-CCceeecCCChhHHHHHHHHHHHHHhhc------cCCCcEEEe
Q psy2719 624 IGIISGRTLENLMKMVNIE--KVTYAGSHGLEILHP-DGTKFVHPVPKEYAEKLRQLIKALQDEV------CHDGAWIEN 694 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~------~~~g~~ie~ 694 (808)
|+++|||+...+..++... ..++|++||+.++.. +...+..+++.+ .++++++.+.+.- ...+.+.+.
T Consensus 40 ~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~---~~~~i~~~l~~~~~~~~~~~~~~~~~~~ 116 (288)
T 1nrw_A 40 VVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRLYHHETIDKK---RAYDILSWLESENYYYEVFTGSAIYTPQ 116 (288)
T ss_dssp EEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCEEEECCCCHH---HHHHHHHHHHHTTCEEEEEESSCEEECC
T ss_pred EEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCcEEEEeeCCHH---HHHHHHHHHHHCCcEEEEEeCCEEEEcC
Confidence 9999999999888776422 236899999999874 333455667654 5677777665430 112222211
Q ss_pred cC---------------------------------cEEEEE--cCcC-----Chh--------hHHHHHHHHHHHHHhc-
Q psy2719 695 KG---------------------------------VLLTFH--YRET-----PIE--------RREYIIDRASQIFLEA- 725 (808)
Q Consensus 695 k~---------------------------------~~~~~~--~~~~-----~~~--------~~~~~~~~~~~~~~~~- 725 (808)
.. ..+... +... +.. ...+.++++.+.+...
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l~~~~ 196 (288)
T 1nrw_A 117 NGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAE 196 (288)
T ss_dssp CHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCT
T ss_pred chHHHHHHHHHHHhhcccccchHHHHhhhhhhhhcCCceEcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHHhhCC
Confidence 00 001000 0000 000 0012223333333322
Q ss_pred CeeE-EccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCcccccc
Q psy2719 726 GFEP-HNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSW 799 (808)
Q Consensus 726 ~~~v-~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A 799 (808)
++.+ .++..++||.|+ +++||.|++.++++ +|++.+ ++++|| |++|++.++ ++|+|+| .+++|+.|
T Consensus 197 ~~~~~~s~~~~lei~~~-~~~K~~~~~~~~~~-~~~~~~---~~~~~GD~~nD~~m~~~ag---~~va~~~~~~~~~~~a 268 (288)
T 1nrw_A 197 DLTLVSSAEHNFELSSR-KASKGQALKRLAKQ-LNIPLE---ETAAVGDSLNDKSMLEAAG---KGVAMGNAREDIKSIA 268 (288)
T ss_dssp TEEEECSSTTEEEEEET-TCSHHHHHHHHHHH-TTCCGG---GEEEEESSGGGHHHHHHSS---EEEECTTCCHHHHHHC
T ss_pred CEEEEeeCCCcEEEecC-CCChHHHHHHHHHH-hCCCHH---HEEEEcCCHHHHHHHHHcC---cEEEEcCCCHHHHhhC
Confidence 3554 467789999998 99999999999997 899875 799999 999999994 4699997 58899999
Q ss_pred ccccCcC
Q psy2719 800 KQGSNHT 806 (808)
Q Consensus 800 ~~~~~~~ 806 (808)
+|+++++
T Consensus 269 ~~v~~~~ 275 (288)
T 1nrw_A 269 DAVTLTN 275 (288)
T ss_dssp SEECCCG
T ss_pred ceeecCC
Confidence 9999865
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.5e-20 Score=210.42 Aligned_cols=121 Identities=10% Similarity=0.061 Sum_probs=95.7
Q ss_pred CccEEEEcCCCCHH------HHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC--------
Q psy2719 386 WSPIRYIFGCIGQE------ELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH-------- 451 (808)
Q Consensus 386 ~~~v~~~~~~v~~~------el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~-------- 451 (808)
...|+++.+.++.. ++..+|+.||+||+||++||||++++|||||+ .|+|+|+.+|+.+.+.
T Consensus 491 rVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G----~PvI~s~~gG~~d~V~dg~~~~~~ 566 (725)
T 3nb0_A 491 RVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMG----VPSITTNVSGFGSYMEDLIETNQA 566 (725)
T ss_dssp SEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTT----CCEEEETTBHHHHHHHTTSCHHHH
T ss_pred ceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcC----CCEEEeCCCChhhhhhccccccCC
Confidence 34578888888876 58999999999999999999999999999995 5799999999876652
Q ss_pred --ceEEEC---CCCHHHHHHHHHHHh----CCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHccc
Q psy2719 452 --EALLVN---PYEIDAAANVLHRAL----CMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALD 510 (808)
Q Consensus 452 --~~llvn---P~d~~~lA~ai~~~L----~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 510 (808)
+|++|+ |.|+++++++|.++| .++++++..+.++.++....++|..-++.+++..+.+.
T Consensus 567 ~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL 634 (725)
T 3nb0_A 567 KDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLAL 634 (725)
T ss_dssp HHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 388884 556666666665555 46666666666666777788999999999998877653
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.81 E-value=9.4e-20 Score=188.05 Aligned_cols=195 Identities=12% Similarity=0.138 Sum_probs=134.8
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
++|++|+||||++. +..++++++++|++|+++ |+.
T Consensus 6 kli~~DlDGTLl~~-----~~~i~~~~~~~l~~l~~~----------------------------------------g~~ 40 (227)
T 1l6r_A 6 RLAAIDVDGNLTDR-----DRLISTKAIESIRSAEKK----------------------------------------GLT 40 (227)
T ss_dssp CEEEEEHHHHSBCT-----TSCBCHHHHHHHHHHHHT----------------------------------------TCE
T ss_pred EEEEEECCCCCcCC-----CCcCCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 69999999999983 357899999999999987 999
Q ss_pred EEEEeCCChhhHHHhcCcc--ceEEEcccceeEecCCCc-e-eecCCChhHHHHHHHHHHHHHhhccCCCcEEE---ecC
Q psy2719 624 IGIISGRTLENLMKMVNIE--KVTYAGSHGLEILHPDGT-K-FVHPVPKEYAEKLRQLIKALQDEVCHDGAWIE---NKG 696 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~~--~~~li~~nG~~i~~~~~~-~-~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie---~k~ 696 (808)
|+|+|||+...+..++... ..++|++||+.++.+++. . +..++ +.++++ +.+.+.+.....+.. ..+
T Consensus 41 ~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l-----~~~~~i-~~~~~~~~~~~~~~~~~~~~~ 114 (227)
T 1l6r_A 41 VSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNE-----GTNKFL-EEMSKRTSMRSILTNRWREAS 114 (227)
T ss_dssp EEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSH-----HHHHHH-HHHTTTSSCBCCGGGGGCSSS
T ss_pred EEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccH-----HHHHHH-HHHHHHhcCCccccccceecc
Confidence 9999999999887776421 235899999999874333 3 33344 345555 544431000000000 000
Q ss_pred cEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----
Q psy2719 697 VLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG---- 772 (808)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G---- 772 (808)
... . ....++ +..+++.+ .+++.+.++..++||.|+ +++||.+++.++++ +|++.+ ++++||
T Consensus 115 ~~~-~-~~~~~~----~~~~~~~~---~~~~~~~~~~~~~ei~~~-~~~K~~~l~~l~~~-~~~~~~---~~~~iGD~~n 180 (227)
T 1l6r_A 115 TGF-D-IDPEDV----DYVRKEAE---SRGFVIFYSGYSWHLMNR-GEDKAFAVNKLKEM-YSLEYD---EILVIGDSNN 180 (227)
T ss_dssp EEE-B-CCGGGH----HHHHHHHH---TTTEEEEEETTEEEEEET-TCSHHHHHHHHHHH-TTCCGG---GEEEECCSGG
T ss_pred cce-E-EecCCH----HHHHHHHH---hcCEEEEecCcEEEEecC-CCCHHHHHHHHHHH-hCcCHH---HEEEECCcHH
Confidence 000 0 000111 11222222 235665688899999998 99999999999986 898865 799999
Q ss_pred CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 773 NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 773 D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
|++||+.++ ++|+|+| .+++|+.|+|+++++
T Consensus 181 D~~m~~~ag---~~va~~n~~~~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 181 DMPMFQLPV---RKACPANATDNIKAVSDFVSDYS 212 (227)
T ss_dssp GHHHHTSSS---EEEECTTSCHHHHHHCSEECSCC
T ss_pred hHHHHHHcC---ceEEecCchHHHHHhCCEEecCC
Confidence 999999984 4699997 578999999999875
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-19 Score=188.16 Aligned_cols=194 Identities=18% Similarity=0.133 Sum_probs=129.5
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
|+|++|+||||+ .. ..++ +++++|++|+++ |+.
T Consensus 3 kli~~DlDGTLl-~~-----~~~~-~~~~~l~~l~~~----------------------------------------g~~ 35 (249)
T 2zos_A 3 RLIFLDIDKTLI-PG-----YEPD-PAKPIIEELKDM----------------------------------------GFE 35 (249)
T ss_dssp EEEEECCSTTTC-TT-----SCSG-GGHHHHHHHHHT----------------------------------------TEE
T ss_pred cEEEEeCCCCcc-CC-----CCcH-HHHHHHHHHHHC----------------------------------------CCE
Confidence 699999999999 32 2344 499999999887 999
Q ss_pred EEEEeCCChhhHHHhcCc--cceEEEcccceeEecCC--------------CceeecCCChhHHHHHHHHHHHHHhh--c
Q psy2719 624 IGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPD--------------GTKFVHPVPKEYAEKLRQLIKALQDE--V 685 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~--------------~~~~~~~~~~~~~~~v~~i~~~~~~~--~ 685 (808)
|+|+|||+...+..++.. .+.++|++||+.++.++ +..+..+++.+ .++++++.+.+. .
T Consensus 36 ~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~i~~~~l~~~---~~~~i~~~~~~~~~~ 112 (249)
T 2zos_A 36 IIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVE---KIREELKKLENIYGL 112 (249)
T ss_dssp EEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCCC------CCCCCCEEECSCCHH---HHHHHHHHHHHHHTC
T ss_pred EEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCcccccccccccCceEEEecCCCHH---HHHHHHHHHHhhcCE
Confidence 999999999888777642 12479999999998763 33455667764 445555544331 0
Q ss_pred ---cCC---------CcEEE------ecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHH
Q psy2719 686 ---CHD---------GAWIE------NKGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQG 747 (808)
Q Consensus 686 ---~~~---------g~~ie------~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG 747 (808)
... +.... .+.....+.+...+ +. .+.+ ...++.+..+..++||+| ++|||
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~l----~~~~~~~~~s~~~~ei~~--g~sKg 181 (249)
T 2zos_A 113 KYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRD-GW----EEVL----VEGGFKVTMGSRFYTVHG--NSDKG 181 (249)
T ss_dssp EEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEECSSS-CH----HHHH----HHTTCEEEECSSSEEEEC--SCCHH
T ss_pred EEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEecCCH-HH----HHHH----HhCCEEEEecCCeEEEeC--CCChH
Confidence 000 00000 00000111111111 11 1122 223566655557899996 89999
Q ss_pred HHHHHHHHHhcCC-CCCcceeEEEEe----CHHHHHhccCCccEEEeCC-C-CccccccccccCc
Q psy2719 748 RASIHILRTMYGV-DWSERVRIIYAG----NEDAMLALQGIACTFRVDS-S-PTVKSSWKQGSNH 805 (808)
Q Consensus 748 ~av~~ll~~~~~i-~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~-~~vk~~A~~~~~~ 805 (808)
.|++.|+++ +|+ +.+ +++||| |++||+.++ ++|+|+| . +++|+.|+|++++
T Consensus 182 ~al~~l~~~-~~~~~~~---~viafGD~~NDi~Ml~~ag---~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 182 KAAKILLDF-YKRLGQI---ESYAVGDSYNDFPMFEVVD---KVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp HHHHHHHHH-HHTTSCE---EEEEEECSGGGHHHHTTSS---EEEEESSCCCTTEEEESSHHHHH
T ss_pred HHHHHHHHH-hccCCCc---eEEEECCCcccHHHHHhCC---cEEEeCCCCccccchhceEEecc
Confidence 999999997 787 753 899999 999999984 5699997 3 6799999999865
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.1e-20 Score=193.80 Aligned_cols=199 Identities=15% Similarity=0.236 Sum_probs=128.2
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
++|++|+||||++.. ..+ ++++++|+++. + |+.
T Consensus 4 ~li~~DlDGTLl~~~-----~~~-~~~~~~l~~~~-~----------------------------------------gi~ 36 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQ-----QAL-EHLQEYLGDRR-G----------------------------------------NFY 36 (244)
T ss_dssp EEEEECTBTTTBSCH-----HHH-HHHHHHHHTTG-G----------------------------------------GEE
T ss_pred eEEEEeCCCCCcCCH-----HHH-HHHHHHHHHhc-C----------------------------------------CCE
Confidence 499999999999832 222 55666666533 3 799
Q ss_pred EEEEeCCChhhHHHhcC---cc-ceEEEcccceeEecCCC--ceeecCCChhH-HHHHHHHHHHHHhhccCCCcEE----
Q psy2719 624 IGIISGRTLENLMKMVN---IE-KVTYAGSHGLEILHPDG--TKFVHPVPKEY-AEKLRQLIKALQDEVCHDGAWI---- 692 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~---~~-~~~li~~nG~~i~~~~~--~~~~~~~~~~~-~~~v~~i~~~~~~~~~~~g~~i---- 692 (808)
|+|+|||++..+.+++. .. ..++|++||+.++.... ..+...+...| .+.+..++.. .++...
T Consensus 37 v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 110 (244)
T 1s2o_A 37 LAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADG------FEALKPQSPL 110 (244)
T ss_dssp EEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHT------CTTEEECCGG
T ss_pred EEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCCcChHHHHHHhccccHHHHHHHHHh------ccCccccCcc
Confidence 99999999998887764 32 24799999999987421 01111111111 1111122111 122111
Q ss_pred EecCcEEEEEcCcCChhhHHHHHHHHHHHHHhc--CeeE-EccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEE
Q psy2719 693 ENKGVLLTFHYRETPIERREYIIDRASQIFLEA--GFEP-HNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRII 769 (808)
Q Consensus 693 e~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v-~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~vi 769 (808)
+.+...+.+++..... .+..+.+.+.+... ++.+ .++..++||+|+ +++||.|++.++++ +|++.+ +++
T Consensus 111 ~~~~~ki~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~s~~~~lei~~~-~~~K~~~l~~l~~~-~~~~~~---~~~ 182 (244)
T 1s2o_A 111 EQNPWKISYHLDPQAC---PTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQ-RSNKGNATQYLQQH-LAMEPS---QTL 182 (244)
T ss_dssp GCBTTBEEEEECTTSC---THHHHHHHHHHHTSSCCEEEEEETTTEEEEEET-TCSHHHHHHHHHHH-TTCCGG---GEE
T ss_pred cCCCeEEEEEeChhhH---HHHHHHHHHHHHhcCCCeEEEEecCceEEeccC-CCChHHHHHHHHHH-hCCCHH---HEE
Confidence 1233445555432211 12234444444432 4655 467889999998 99999999999997 899865 799
Q ss_pred EEe----CHHHHHhccCCccEEEeCC-CCccccc-------cccccCcC
Q psy2719 770 YAG----NEDAMLALQGIACTFRVDS-SPTVKSS-------WKQGSNHT 806 (808)
Q Consensus 770 a~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~-------A~~~~~~~ 806 (808)
+|| |++||+.+ |++|+|+| .+++|+. |+|+++++
T Consensus 183 ~~GD~~nD~~m~~~~---g~~va~~na~~~~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 183 VCGDSGNDIGLFETS---ARGVIVRNAQPELLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp EEECSGGGHHHHTSS---SEEEECTTCCHHHHHHHHHHCCTTEEECSSC
T ss_pred EECCchhhHHHHhcc---CcEEEEcCCcHHHHHHHhcccccceeecCCc
Confidence 999 99999977 45699997 5789986 88999865
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.80 E-value=6e-19 Score=171.79 Aligned_cols=161 Identities=13% Similarity=0.092 Sum_probs=120.3
Q ss_pred CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy2719 311 LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIR 390 (808)
Q Consensus 311 ~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~ 390 (808)
+++|+++||+.+.||++.+++|+..+ +++| ++.|+++|.+ +. ++++++++.+.+. .+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~----~~~l~i~G~g-----~~----~~~~~~~~~~~~~---------~v 58 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQ----DIVLLLKGKG-----PD----EKKIKLLAQKLGV---------KA 58 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGG----GEEEEEECCS-----TT----HHHHHHHHHHHTC---------EE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCC----CeEEEEEeCC-----cc----HHHHHHHHHHcCC---------eE
Confidence 46899999999999999999999986 4444 4568877743 22 2344555555432 24
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCc-eEEEcCCCC-CccccC-ceEEECCCCHHHHHHH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPG-VLILSPFAG-AGGMMH-EALLVNPYEIDAAANV 467 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g-~vVlS~~~G-~~~~l~-~~llvnP~d~~~lA~a 467 (808)
.+ |.++.+++..+|+.||++|+||..||||++++|||||+ . |+|++...| ..+.+. ++.+++|.|+++++++
T Consensus 59 ~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G----~vPvi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 133 (166)
T 3qhp_A 59 EF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVG----IVPVIANSPLSATRQFALDERSLFEPNNAKDLSAK 133 (166)
T ss_dssp EC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTT----CCEEEECCTTCGGGGGCSSGGGEECTTCHHHHHHH
T ss_pred EE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcC----CCcEEeeCCCCchhhhccCCceEEcCCCHHHHHHH
Confidence 45 99999999999999999999999999999999999994 4 677745444 445544 4669999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHH
Q psy2719 468 LHRALCMPRDERELRMSQLRHREQQLDVNHWMN 500 (808)
Q Consensus 468 i~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~ 500 (808)
|.++++ +++.+++..+++++++++++++..++
T Consensus 134 i~~l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 134 IDWWLE-NKLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp HHHHHH-CHHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHh-CHHHHHHHHHHHHHHHHHCChhhhhc
Confidence 999998 45666666677788888888777654
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=179.31 Aligned_cols=195 Identities=15% Similarity=0.174 Sum_probs=137.0
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
++|+||+||||++. ...++++++++|++++++ |+.
T Consensus 4 kli~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~----------------------------------------G~~ 38 (231)
T 1wr8_A 4 KAISIDIDGTITYP-----NRMIHEKALEAIRRAESL----------------------------------------GIP 38 (231)
T ss_dssp CEEEEESTTTTBCT-----TSCBCHHHHHHHHHHHHT----------------------------------------TCC
T ss_pred eEEEEECCCCCCCC-----CCcCCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 58999999999983 457899999999999887 999
Q ss_pred EEEEeCCChhhHHHhc---CccceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEe-cC---
Q psy2719 624 IGIISGRTLENLMKMV---NIEKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIEN-KG--- 696 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~---~~~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~-k~--- 696 (808)
|+++|||+...+.+++ +. +.++|++||+.++..++..+..++ . .++++++.+.+. .+|..++. ..
T Consensus 39 v~i~TGR~~~~~~~~~~~l~~-~~~~i~~nGa~i~~~~~~~~~~~l-~----~~~~i~~~~~~~--~~~~~~~~~~~~~~ 110 (231)
T 1wr8_A 39 IMLVTGNTVQFAEAASILIGT-SGPVVAEDGGAISYKKKRIFLASM-D----EEWILWNEIRKR--FPNARTSYTMPDRR 110 (231)
T ss_dssp EEEECSSCHHHHHHHHHHHTC-CSCEEEGGGTEEEETTEEEESCCC-S----HHHHHHHHHHHH--CTTCCBCTTGGGCS
T ss_pred EEEEcCCChhHHHHHHHHcCC-CCeEEEeCCcEEEeCCEEEEeccH-H----HHHHHHHHHHHh--CCCceEEecCCCce
Confidence 9999999998877665 33 235889999998764333344455 2 456666666522 23332210 00
Q ss_pred cEEEEEcCcCChhhHHHHHHHHHHHHHhc--CeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe--
Q psy2719 697 VLLTFHYRETPIERREYIIDRASQIFLEA--GFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG-- 772 (808)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G-- 772 (808)
..+.+.....+++ .+ .++++.+ .+.+.++..++|+.|+ +.+|+.+++.++++ +|++.+ ++++||
T Consensus 111 ~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~ei~~~-~~~K~~~~~~~~~~-~~~~~~---~~~~iGD~ 178 (231)
T 1wr8_A 111 AGLVIMRETINVE----TV---REIINELNLNLVAVDSGFAIHVKKP-WINKGSGIEKASEF-LGIKPK---EVAHVGDG 178 (231)
T ss_dssp SCEEECTTTSCHH----HH---HHHHHHTTCSCEEEECSSCEEEECT-TCCHHHHHHHHHHH-HTSCGG---GEEEEECS
T ss_pred eeEEEECCCCCHH----HH---HHHHHhcCCcEEEEecCcEEEEecC-CCChHHHHHHHHHH-cCCCHH---HEEEECCC
Confidence 0122211011221 12 2222223 3555577789999998 99999999999997 898865 799999
Q ss_pred --CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 773 --NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 773 --D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
|++|++.++ ++++|+| .+++|+.|+|+++++
T Consensus 179 ~nD~~~~~~ag---~~v~~~~~~~~~~~~a~~v~~~~ 212 (231)
T 1wr8_A 179 ENDLDAFKVVG---YKVAVAQAPKILKENADYVTKKE 212 (231)
T ss_dssp GGGHHHHHHSS---EEEECTTSCHHHHTTCSEECSSC
T ss_pred HHHHHHHHHcC---CeEEecCCCHHHHhhCCEEecCC
Confidence 999999994 4589997 577899999999864
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.78 E-value=8.3e-19 Score=184.54 Aligned_cols=206 Identities=13% Similarity=0.175 Sum_probs=137.8
Q ss_pred eEEEEecccccccCCCCCCccC-CCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAV-MSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~-i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
++|+||+||||++. +.. ++++++++|++|+++ |+
T Consensus 3 kli~~DlDGTLl~~-----~~~~i~~~~~~al~~l~~~----------------------------------------G~ 37 (261)
T 2rbk_A 3 KALFFDIDGTLVSF-----ETHRIPSSTIEALEAAHAK----------------------------------------GL 37 (261)
T ss_dssp CEEEECSBTTTBCT-----TTSSCCHHHHHHHHHHHHT----------------------------------------TC
T ss_pred cEEEEeCCCCCcCC-----CCCcCCHHHHHHHHHHHHC----------------------------------------CC
Confidence 68999999999983 345 899999999999987 99
Q ss_pred eEEEEeCCChhhHHHhcCc-c----ceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhh-c-----cCCCcE
Q psy2719 623 NIGIISGRTLENLMKMVNI-E----KVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDE-V-----CHDGAW 691 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~-~----~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~-----~~~g~~ 691 (808)
.|+++|||+ ..+..++.. . ..++|++||+.++..++..+..+++.+ .++++++.+.+. . ...+.+
T Consensus 38 ~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~ 113 (261)
T 2rbk_A 38 KIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGEEVIYKSAIPQE---EVKAMAAFCEKKGVPCIFVEEHNIS 113 (261)
T ss_dssp EEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETTEEEEECCCCHH---HHHHHHHHHHHHTCCEEEECSSCEE
T ss_pred EEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECCEEEEecCCCHH---HHHHHHHHHHHcCCeEEEEeCCcEE
Confidence 999999999 877665431 1 225899999999874434556677765 456666665543 0 111223
Q ss_pred EEecCcEEE-EEcCcC--------ChhhHH--HH--------HHHHHHHHHhc-CeeE-EccCeEEEEeCCCCCCHHHHH
Q psy2719 692 IENKGVLLT-FHYRET--------PIERRE--YI--------IDRASQIFLEA-GFEP-HNALMAIEAKPPVKWDQGRAS 750 (808)
Q Consensus 692 ie~k~~~~~-~~~~~~--------~~~~~~--~~--------~~~~~~~~~~~-~~~v-~~g~~~vEv~p~~~v~KG~av 750 (808)
++.....+. .+++.. .+++.. .. .....++...+ ++.+ .+++.++||.|+ +++||.++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~-~~~K~~~~ 192 (261)
T 2rbk_A 114 VCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAFADVTAK-GDTKQKGI 192 (261)
T ss_dssp EESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHHHHHHHGGGSTTCEEECSSTTCCEEEST-TCSHHHHH
T ss_pred EeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEeCHHHHHHHHHhcCCeEEEEecCCeEEecCC-CCChHHHH
Confidence 321100000 011100 000000 00 00111222222 3554 367789999998 99999999
Q ss_pred HHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 751 IHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 751 ~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+.++++ +|++++ ++++|| |++|++.++ ++|+|+| .+++|+.|+|+++++
T Consensus 193 ~~~~~~-~~~~~~---~~~~iGD~~nD~~~~~~ag---~~v~~~n~~~~~~~~a~~v~~~~ 246 (261)
T 2rbk_A 193 DEIIRH-FGIKLE---ETMSFGDGGNDISMLRHAA---IGVAMGQAKEDVKAAADYVTAPI 246 (261)
T ss_dssp HHHHHH-HTCCGG---GEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHSSEECCCG
T ss_pred HHHHHH-cCCCHH---HEEEECCCHHHHHHHHHcC---ceEEecCccHHHHhhCCEEeccC
Confidence 999997 899875 799999 999999994 5699997 578999999999865
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=8.4e-19 Score=191.30 Aligned_cols=184 Identities=13% Similarity=0.092 Sum_probs=143.5
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
.++.++|+|||++.|.+.... ..++++|+++||+.+.||++.+++|++.+ + +.|+++|.+.
T Consensus 138 ~~~~vi~ngvd~~~~~~~~~~------~~~~~~i~~vG~~~~~Kg~~~li~a~~~~-----~----~~l~i~G~g~---- 198 (342)
T 2iuy_A 138 DDAPVIPIPVDPARYRSAADQ------VAKEDFLLFMGRVSPHKGALEAAAFAHAC-----G----RRLVLAGPAW---- 198 (342)
T ss_dssp TTSCBCCCCBCGGGSCCSTTC------CCCCSCEEEESCCCGGGTHHHHHHHHHHH-----T----CCEEEESCCC----
T ss_pred CceEEEcCCCChhhcCccccc------CCCCCEEEEEeccccccCHHHHHHHHHhc-----C----cEEEEEeCcc----
Confidence 457789999999888764321 13456899999999999999999999886 2 3477776432
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC----------CCCCChhHHHHHHh
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPL----------RDGMNLVAKEYVAC 430 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~----------~EG~gLv~~Eama~ 430 (808)
. ++++++++.+++. .| .+.|.++++++..+|+.||++|+||. .||||++++|||||
T Consensus 199 -~----~~~l~~~~~~~~~--------~v-~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~ 264 (342)
T 2iuy_A 199 -E----PEYFDEITRRYGS--------TV-EPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVS 264 (342)
T ss_dssp -C----HHHHHHHHHHHTT--------TE-EECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHT
T ss_pred -c----HHHHHHHHHHhCC--------CE-EEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhc
Confidence 1 2334445545431 34 46799999999999999999999999 89999999999999
Q ss_pred ccCCCceEEEcCCCCCccccC-----ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHH
Q psy2719 431 QIREPGVLILSPFAGAGGMMH-----EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLS 504 (808)
Q Consensus 431 ~~~~~g~vVlS~~~G~~~~l~-----~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~ 504 (808)
+ .|+|+|+.+|..+.+. +|++++| |+++++++|.++++ .+++++++ +.++++..++++++
T Consensus 265 G----~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~ 330 (342)
T 2iuy_A 265 G----TPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVE 330 (342)
T ss_dssp T----CCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHH
T ss_pred C----CCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHH
Confidence 5 5699999988888773 3899999 99999999999986 22334444 67799999999998
Q ss_pred HHHcccc
Q psy2719 505 SMGALDN 511 (808)
Q Consensus 505 ~l~~~~~ 511 (808)
.++++.+
T Consensus 331 ~~~~~~~ 337 (342)
T 2iuy_A 331 QYRRLLA 337 (342)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 8887644
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.8e-18 Score=192.89 Aligned_cols=176 Identities=11% Similarity=0.048 Sum_probs=126.4
Q ss_pred EEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCc-cccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCCh
Q psy2719 282 HVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRL-DYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDV 360 (808)
Q Consensus 282 ~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl-~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~ 360 (808)
++.++|+|+|.+.|.+... ...+++.|+++||+ .+.||++.+|+||+.+.+++|+. .++.|+++|.+...
T Consensus 218 ~~~~i~~g~d~~~~~~~~~------~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG~~~~~-- 288 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYIND------KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVGEKHKD-- 288 (413)
T ss_dssp EEEEECCCCCHHHHTTTTS------CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEESCCCC--
T ss_pred ceEEeCCCcCchhhccccc------ccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEcCCchh--
Confidence 4678899999887653210 01345678999996 68999999999999999888862 13458888853211
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEE
Q psy2719 361 LEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLIL 440 (808)
Q Consensus 361 ~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVl 440 (808)
.+++. ..-+.|.|.++.+++.++|+.||+||+||.+||||++++|||||| .|||+
T Consensus 289 --------------~~l~~-------~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G----~PVV~ 343 (413)
T 2x0d_A 289 --------------IALGK-------GIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFG----LRVIT 343 (413)
T ss_dssp --------------EEEET-------TEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTT----CEEEE
T ss_pred --------------hhcCC-------cCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCC----CcEEE
Confidence 01111 123456799999999999999999999999999999999999995 45676
Q ss_pred cCCCCCccccC---ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHH
Q psy2719 441 SPFAGAGGMMH---EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVN 496 (808)
Q Consensus 441 S~~~G~~~~l~---~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~ 496 (808)
..+|..+.+. +|++|+|.|++++|++|.++++.+. .+++ +.++.+..++|+
T Consensus 344 -~~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~-~~~~---~~~~~~~~~~W~ 397 (413)
T 2x0d_A 344 -NKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN-NRDV---DKKESSNMMFYI 397 (413)
T ss_dssp -ECBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC-----------CCBSCGGGC
T ss_pred -eCCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH-HHHH---hHHHHHHhCCHH
Confidence 4567766663 5999999999999999999997542 2222 334444555443
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=8.5e-18 Score=176.67 Aligned_cols=193 Identities=15% Similarity=0.121 Sum_probs=132.2
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
||+||+||||++ +. .+++++.++|+++++. |+.|
T Consensus 2 li~~DlDGTLl~-----~~-~i~~~~~~al~~l~~~----------------------------------------Gi~v 35 (259)
T 3zx4_A 2 IVFTDLDGTLLD-----ER-GELGPAREALERLRAL----------------------------------------GVPV 35 (259)
T ss_dssp EEEECCCCCCSC-----SS-SSCSTTHHHHHHHHHT----------------------------------------TCCE
T ss_pred EEEEeCCCCCcC-----CC-cCCHHHHHHHHHHHHC----------------------------------------CCeE
Confidence 799999999998 34 6889999999999887 9999
Q ss_pred EEEeCCChhhHHHhcCccceEEEcccceeEecCCCc------------eeecCCChhHHHHHHHHHHHHHhhccCC-CcE
Q psy2719 625 GIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGT------------KFVHPVPKEYAEKLRQLIKALQDEVCHD-GAW 691 (808)
Q Consensus 625 ~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~------------~~~~~~~~~~~~~v~~i~~~~~~~~~~~-g~~ 691 (808)
+++|||+...+. .++. ..++|++||+.++.+.+. .+...++.+ .++++++.+.+..... ..+
T Consensus 36 ~iaTGR~~~~~~-~l~~-~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~ 110 (259)
T 3zx4_A 36 VPVTAKTRKEVE-ALGL-EPPFIVENGGGLYLPRDWPVRAGRPKGGYRVVSLAWPYR---KVRARLREAEALAGRPILGY 110 (259)
T ss_dssp EEBCSSCHHHHH-HTTC-CSSEEEGGGTEEEEETTCSSCCSEEETTEEEEECSCCHH---HHHHHHHHHHHHHTSCCCBG
T ss_pred EEEeCCCHHHHH-HcCC-CCcEEEECCcEEEeCCCCcccccccCCceEEEEcCCCHH---HHHHHHHHHHHhcCceEEEc
Confidence 999999999988 5564 346899999999876543 234456554 4455555544310000 000
Q ss_pred EE---------------------ecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHH
Q psy2719 692 IE---------------------NKGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRAS 750 (808)
Q Consensus 692 ie---------------------~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av 750 (808)
.. .......+.+ .++ . .+.+.+.+...++.++.+..++||.|+ ++||.|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~----~~~~~~~l~~~~~~~~~s~~~~ei~~~--~~K~~~l 181 (259)
T 3zx4_A 111 GDLTAEAVARLTGLSREAARRAKAREYDETLVL--CPE-E----VEAVLEALEAVGLEWTHGGRFYHAAKG--ADKGRAV 181 (259)
T ss_dssp GGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCC--CTT-T----HHHHHHHHHHTTCEEEECSSSEEEESS--CCHHHHH
T ss_pred CCCCHHHHHHHcCCCHHHhhhhhccccceeEEe--CcH-H----HHHHHHHHHHCCcEEEecCceEEEcCC--CCHHHHH
Confidence 00 0000011111 111 1 234444444446776655567899985 8999999
Q ss_pred HHHHHHhcCCCC--CcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccCcC
Q psy2719 751 IHILRTMYGVDW--SERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 751 ~~ll~~~~~i~~--~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~~ 806 (808)
++++++ +|++. + ++++|| |++||+.++ ++|+|+|+..+ .|+|++.++
T Consensus 182 ~~l~~~-~~i~~~~~---~~~~~GD~~nD~~m~~~ag---~~va~~na~~~--~~~~~~~~~ 234 (259)
T 3zx4_A 182 ARLRAL-WPDPEEAR---FAVGLGDSLNDLPLFRAVD---LAVYVGRGDPP--EGVLATPAP 234 (259)
T ss_dssp HHHHHT-CSSHHHHT---SEEEEESSGGGHHHHHTSS---EEEECSSSCCC--TTCEECSSC
T ss_pred HHHHHH-hCCCCCCc---eEEEEeCCHHHHHHHHhCC---CeEEeCChhhc--CCcEEeCCC
Confidence 999996 89875 5 799999 999999994 56999985444 788998765
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=4.7e-17 Score=182.57 Aligned_cols=168 Identities=11% Similarity=0.080 Sum_probs=127.1
Q ss_pred EEEEeecCcCccccchhhcCchhhhhcCCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChH
Q psy2719 282 HVKALPIGIPFERFVQLAENAPENLKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVL 361 (808)
Q Consensus 282 ~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~ 361 (808)
++.++|||||.+.|.+.... ...++++|+++||+.+.||+ ++.+.++.|++ .|+++|.+.
T Consensus 198 ~i~vipngvd~~~f~~~~~~-----~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~----~l~ivG~g~----- 257 (406)
T 2hy7_A 198 NVFHVGHGVDHNLDQLGDPS-----PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQV----TFHVIGSGM----- 257 (406)
T ss_dssp TEEECCCCBCTTHHHHHCSC-----SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTE----EEEEESCSS-----
T ss_pred CEEEEcCCcChHhcCccccc-----ccCCCcEEEEEeccccccCH------HHHHHHhCCCe----EEEEEeCch-----
Confidence 78899999999988754221 01334889999999999999 45555667765 477776321
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHH-------HhccCC
Q psy2719 362 EYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYV-------ACQIRE 434 (808)
Q Consensus 362 ~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eam-------a~~~~~ 434 (808)
+.+. +.. ..| .|.|.++.+++.++|+.||++|+||..||||++++||| ||+
T Consensus 258 ------------~~~~----~l~--~~V-~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G--- 315 (406)
T 2hy7_A 258 ------------GRHP----GYG--DNV-IVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFG--- 315 (406)
T ss_dssp ------------CCCT----TCC--TTE-EEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHT---
T ss_pred ------------HHhc----CCC--CCE-EEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCC---
Confidence 1111 111 134 45799999999999999999999999999999999999 996
Q ss_pred CceEEEcCCCCCccccCceEE-ECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHH
Q psy2719 435 PGVLILSPFAGAGGMMHEALL-VNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSS 505 (808)
Q Consensus 435 ~g~vVlS~~~G~~~~l~~~ll-vnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 505 (808)
.|+|+|+. ..+ -.+|++ |+|.|++++|++|.++++++. ++..+.++|+..++++++.
T Consensus 316 -~PVIas~~--v~~-~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 316 -LPAVCPNA--VVG-PYKSRFGYTPGNADSVIAAITQALEAPR----------VRYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp -CCEEEEGG--GTC-SCSSEEEECTTCHHHHHHHHHHHHHCCC----------CCCSCCCBHHHHHHHHHCG
T ss_pred -CcEEEehh--ccc-CcceEEEeCCCCHHHHHHHHHHHHhCcc----------hhhhhcCCHHHHHHHHHHh
Confidence 46888876 111 125899 999999999999999998764 1345678888888887766
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-16 Score=157.23 Aligned_cols=141 Identities=16% Similarity=0.194 Sum_probs=110.3
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSP 388 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~ 388 (808)
.++++|+++||+.+.||++.+++|++.+ |++ .|+++|.+... +++++.+.++ ..+.. ..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~----~l~i~G~~~~~-----~~l~~~~~~~--~~~l~------~~ 79 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDE----KLYIVGWFSKG-----DHAERYARKI--MKIAP------DN 79 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTS----CEEEEBCCCTT-----STHHHHHHHH--HHHSC------TT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCc----EEEEEecCccH-----HHHHHHHHhh--hcccC------Cc
Confidence 4677899999999999999999999876 554 37777753311 1233322211 22211 13
Q ss_pred EEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHH
Q psy2719 389 IRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAA 465 (808)
Q Consensus 389 v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA 465 (808)
| .+.|.++.+++..+|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+. .|+++ |.|+++++
T Consensus 80 v-~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~ 153 (177)
T 2f9f_A 80 V-KFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG----KPVIAVNEGGFKETVINEKTGYLV-NADVNEII 153 (177)
T ss_dssp E-EEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT----CCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHH
T ss_pred E-EEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcC----CcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHH
Confidence 4 45699999999999999999999999999999999999995 5699999887777774 58999 99999999
Q ss_pred HHHHHHhCCCH
Q psy2719 466 NVLHRALCMPR 476 (808)
Q Consensus 466 ~ai~~~L~~~~ 476 (808)
++|.++++++.
T Consensus 154 ~~i~~l~~~~~ 164 (177)
T 2f9f_A 154 DAMKKVSKNPD 164 (177)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCHH
Confidence 99999998765
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.7e-15 Score=176.88 Aligned_cols=198 Identities=13% Similarity=0.060 Sum_probs=145.0
Q ss_pred EEEEEeecCcCccccchhhcCchhhhhc---CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCC
Q psy2719 281 VHVKALPIGIPFERFVQLAENAPENLKD---ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSR 357 (808)
Q Consensus 281 ~~v~v~p~GID~~~f~~~~~~~~~~~~~---~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~ 357 (808)
.++.++|+++++....+.... ...+++ ++.++++++||+.+ ||++.+++|+.++++++|+++ |+++|.
T Consensus 344 ~~i~~ipn~~~~~~~~~~~~~-~~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i~G~--- 414 (568)
T 2vsy_A 344 EHVLRLQGAFQPSDTSRVVAE-PPSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWLLSG--- 414 (568)
T ss_dssp SEEEECSSCSCCCCTTCCCCC-CCCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEEECC---
T ss_pred ceeEcCCCcCCCCCCCCCCCC-CCCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEEecC---
Confidence 578889986554322111011 112222 34456779999999 999999999999999999764 777762
Q ss_pred CChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCce
Q psy2719 358 TDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGV 437 (808)
Q Consensus 358 ~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~ 437 (808)
+++ .++++++++.+.+.. -..| .|.|.++.+++..+|+.||+||+||.+ |||++++|||||| .|
T Consensus 415 -~g~----~~~~l~~~~~~~~l~-----~~~v-~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G----~P 478 (568)
T 2vsy_A 415 -PGE----ADARLRAFAHAQGVD-----AQRL-VFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTG----CP 478 (568)
T ss_dssp -STT----HHHHHHHHHHHTTCC-----GGGE-EEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTT----CC
T ss_pred -CHH----HHHHHHHHHHHcCCC-----hhHE-EeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCC----CC
Confidence 222 234555555554321 0134 467999999999999999999999999 9999999999996 56
Q ss_pred EEE-------cCCC-------CCccccCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH---hcCCHHHHHH
Q psy2719 438 LIL-------SPFA-------GAGGMMHEALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHRE---QQLDVNHWMN 500 (808)
Q Consensus 438 vVl-------S~~~-------G~~~~l~~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v---~~~~~~~W~~ 500 (808)
||+ |+.+ |..+.+.+ |+++++++|.++++. ++.+.+..+++++++ ..+++...++
T Consensus 479 vv~~~g~~~~s~~~~~~l~~~g~~e~v~~-------~~~~la~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 550 (568)
T 2vsy_A 479 VLTTPGETFAARVAGSLNHHLGLDEMNVA-------DDAAFVAKAVALASD-PAALTALHARVDVLRRASGVFHMDGFAD 550 (568)
T ss_dssp EEBCCCSSGGGSHHHHHHHHHTCGGGBCS-------SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSSTTCHHHHHH
T ss_pred EEeccCCCchHHHHHHHHHHCCChhhhcC-------CHHHHHHHHHHHhcC-HHHHHHHHHHHHHhhhcCCCCCHHHHHH
Confidence 888 8888 77776644 899999999999984 455666666677777 6789999999
Q ss_pred HHHHHHHcccc
Q psy2719 501 SFLSSMGALDN 511 (808)
Q Consensus 501 ~~l~~l~~~~~ 511 (808)
.+++.++++.+
T Consensus 551 ~~~~~y~~~~~ 561 (568)
T 2vsy_A 551 DFGALLQALAR 561 (568)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99888876543
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.7e-16 Score=165.91 Aligned_cols=215 Identities=16% Similarity=0.197 Sum_probs=144.9
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
..++|+||+||||++. . +++++..++.++.+ .|++++..+|
T Consensus 21 ~~kliifDlDGTLlds-----~--i~~~~~~~l~~~~~--------------------------------~l~~~~~~~g 61 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPH-----T--IDEQKQQDIYELED--------------------------------YLEQKSKDGE 61 (289)
T ss_dssp CSEEEEEETBTTTBCS-----S--CCHHHHHHHHHHHH--------------------------------HHHHHHHTTC
T ss_pred CCeEEEEECCCCCcCC-----C--CCcchHHHHHHHHH--------------------------------HHHHHHhcCC
Confidence 3579999999999982 2 78888888876543 3555555579
Q ss_pred CeEEEEeCCChhhHHHhc---Ccc--ceEEEcccceeEecC---CCceee--------cCCChhHHHHHHHHHHHHHhhc
Q psy2719 622 VNIGIISGRTLENLMKMV---NIE--KVTYAGSHGLEILHP---DGTKFV--------HPVPKEYAEKLRQLIKALQDEV 685 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~---~~~--~~~li~~nG~~i~~~---~~~~~~--------~~~~~~~~~~v~~i~~~~~~~~ 685 (808)
+.++++|||+...+..++ +.+ ...+++.+|..++.. +...+. .... .+.+.++++.+.+..
T Consensus 62 ~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~~g~~i~~~~~ng~~~~~~~~~~~~~~~~~---~~~v~e~l~~l~~~~ 138 (289)
T 3gyg_A 62 LIIGWVTGSSIESILDKMGRGKFRYFPHFIASDLGTEITYFSEHNFGQQDNKWNSRINEGFS---KEKVEKLVKQLHENH 138 (289)
T ss_dssp EEEEEECSSCHHHHHHHHHHTTCCBCCSEEEETTTTEEEECCSSSTTEECHHHHHHHHTTCC---HHHHHHHHHHHHHHS
T ss_pred cEEEEEcCCCHHHHHHHHHhhccCCCCCeEeecCCceEEEEcCCCcEeecCchhhhhcccCC---HHHHHHHHHHHHhhh
Confidence 999999999998877765 332 235777777766542 111110 1122 245677777776541
Q ss_pred cC---CCcEEEecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCee--EE-c--------cCeEEEEeCCCCCCHHHHHH
Q psy2719 686 CH---DGAWIENKGVLLTFHYRETPIERREYIIDRASQIFLEAGFE--PH-N--------ALMAIEAKPPVKWDQGRASI 751 (808)
Q Consensus 686 ~~---~g~~ie~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~-~--------g~~~vEv~p~~~v~KG~av~ 751 (808)
.. ..+..+.+...+.++|+..++.........+.+.+...++. +. . +..++|+.|+ +.+|+.+++
T Consensus 139 g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~ 217 (289)
T 3gyg_A 139 NILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPI-GTGKNEIVT 217 (289)
T ss_dssp SCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEES-CCSHHHHHH
T ss_pred CceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeC-CCCHHHHHH
Confidence 00 01111233345667777665432222344555666665654 22 2 3378999997 999999999
Q ss_pred HHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 752 HILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 752 ~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
.++++ +|++++ ++++|| |++|++.++ ++|+|++ .+++|+.|+|++.++
T Consensus 218 ~~~~~-~~~~~~---~~~~~GDs~~D~~~~~~ag---~~~~~~~~~~~~~~~a~~v~~~~ 270 (289)
T 3gyg_A 218 FMLEK-YNLNTE---RAIAFGDSGNDVRMLQTVG---NGYLLKNATQEAKNLHNLITDSE 270 (289)
T ss_dssp HHHHH-HTCCGG---GEEEEECSGGGHHHHTTSS---EEEECTTCCHHHHHHCCCBCSSC
T ss_pred HHHHH-cCCChh---hEEEEcCCHHHHHHHHhCC---cEEEECCccHHHHHhCCEEcCCC
Confidence 99997 899875 799999 999999994 5699997 578999999999864
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.65 E-value=3.3e-16 Score=172.62 Aligned_cols=194 Identities=10% Similarity=0.101 Sum_probs=133.0
Q ss_pred EEEEEEeecC-cCccccchhhcCchhhhhc--CCCeEEEEEcCcccc-CChHHHHHHHHHHHHhCCCccCcEEEEEEEcC
Q psy2719 280 TVHVKALPIG-IPFERFVQLAENAPENLKD--ENLKVILGVDRLDYT-KGLVHRIKAFERLLEKHPEYVEKVTFLQISVP 355 (808)
Q Consensus 280 ~~~v~v~p~G-ID~~~f~~~~~~~~~~~~~--~~~~iil~V~Rl~~~-KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~ 355 (808)
..++.++|+| +|...|.+.......++++ .+..+++++||+.+. ||++.+++|++++.+++|+++ ++ ++.+
T Consensus 172 ~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~----~i-~~~g 246 (375)
T 3beo_A 172 ESRIFITGNTAIDALKTTVKETYSHPVLEKLGNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQ----VV-YPVH 246 (375)
T ss_dssp GGGEEECCCHHHHHHHHHCCSSCCCHHHHTTTTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEE----EE-EECC
T ss_pred cccEEEECChhHhhhhhhhhhhhhHHHHHhccCCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeE----EE-EeCC
Confidence 3468899999 8977665432111223222 334567789999986 999999999999988888753 44 3321
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCC
Q psy2719 356 SRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREP 435 (808)
Q Consensus 356 ~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~ 435 (808)
. + .+++++++++++. . ..|+ |.|.++..++..+|+.||++|+|| |.+++|||||+
T Consensus 247 ~--~----~~~~~~~~~~~~~-------~--~~v~-~~g~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G---- 301 (375)
T 3beo_A 247 M--N----PVVRETANDILGD-------Y--GRIH-LIEPLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLG---- 301 (375)
T ss_dssp S--C----HHHHHHHHHHHTT-------C--TTEE-EECCCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHT----
T ss_pred C--C----HHHHHHHHHHhhc-------c--CCEE-EeCCCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcC----
Confidence 1 1 1345555554321 0 1344 568889999999999999999999 67799999996
Q ss_pred ceEEEcCC-CCCccccC--ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHH
Q psy2719 436 GVLILSPF-AGAGGMMH--EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSS 505 (808)
Q Consensus 436 g~vVlS~~-~G~~~~l~--~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 505 (808)
.|+|+|.. +|..+.+. +|++|+| |++++|++|.++++. ++.++++.++.+++...+++++-++.+.+.
T Consensus 302 ~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~la~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 372 (375)
T 3beo_A 302 VPVLVLRDTTERPEGIEAGTLKLAGT-DEETIFSLADELLSD-KEAHDKMSKASNPYGDGRASERIVEAILKH 372 (375)
T ss_dssp CCEEECSSCCSCHHHHHTTSEEECCS-CHHHHHHHHHHHHHC-HHHHHHHCCCCCTTCCSCHHHHHHHHHHHH
T ss_pred CCEEEecCCCCCceeecCCceEEcCC-CHHHHHHHHHHHHhC-hHhHhhhhhcCCCCCCCcHHHHHHHHHHHH
Confidence 46888864 66555553 5899987 999999999999984 444444444455555556666666555443
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.7e-14 Score=159.53 Aligned_cols=163 Identities=8% Similarity=0.070 Sum_probs=116.2
Q ss_pred eEEEEEcCcccc-CChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy2719 312 KVILGVDRLDYT-KGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIR 390 (808)
Q Consensus 312 ~iil~V~Rl~~~-KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~ 390 (808)
.+++++||+.+. ||+..+++|+.++.+++|++ .|++++.+ .+ +++++++++++. . ..|.
T Consensus 207 ~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~----~l~i~~g~----~~---~~~~~l~~~~~~-------~--~~v~ 266 (384)
T 1vgv_A 207 MILVTGHRRESFGRGFEEICHALADIATTHQDI----QIVYPVHL----NP---NVREPVNRILGH-------V--KNVI 266 (384)
T ss_dssp EEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTE----EEEEECCB----CH---HHHHHHHHHHTT-------C--TTEE
T ss_pred EEEEEeCCccccchHHHHHHHHHHHHHhhCCCe----EEEEEcCC----CH---HHHHHHHHHhhc-------C--CCEE
Confidence 578899999987 99999999999999988875 35544322 12 244455554321 0 1344
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCC-CCCccccC--ceEEECCCCHHHHHHH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPF-AGAGGMMH--EALLVNPYEIDAAANV 467 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~-~G~~~~l~--~~llvnP~d~~~lA~a 467 (808)
+.|.++.+++..+|+.||++|.|| |.+++|||||+ .|+|+|.. +|..+.+. .|++|+| |+++++++
T Consensus 267 -~~g~~~~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G----~PvI~~~~~~~~~e~v~~g~g~lv~~-d~~~la~~ 335 (384)
T 1vgv_A 267 -LIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLG----KPVLVMRDTTERPEAVTAGTVRLVGT-DKQRIVEE 335 (384)
T ss_dssp -EECCCCHHHHHHHHHHCSEEEESS-----STGGGTGGGGT----CCEEEESSCCSCHHHHHHTSEEEECS-SHHHHHHH
T ss_pred -EeCCCCHHHHHHHHHhCcEEEECC-----cchHHHHHHcC----CCEEEccCCCCcchhhhCCceEEeCC-CHHHHHHH
Confidence 557888899999999999999999 44589999996 46888887 56555553 5999988 99999999
Q ss_pred HHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 468 LHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 468 i~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
|.++|+. ++.++++.++.+++...+++++.++.+++.+
T Consensus 336 i~~ll~d-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 373 (384)
T 1vgv_A 336 VTRLLKD-ENEYQAMSRAHNPYGDGQACSRILEALKNNR 373 (384)
T ss_dssp HHHHHHC-HHHHHHHHSSCCTTCCSCHHHHHHHHHHHTC
T ss_pred HHHHHhC-hHHHhhhhhccCCCcCCCHHHHHHHHHHHHH
Confidence 9999984 4445444444555555556666555554433
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.9e-16 Score=179.39 Aligned_cols=93 Identities=17% Similarity=0.076 Sum_probs=66.6
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+||||+||++++ +|+||||+|...+.. ...+.+............+++.||+|+++++++||+||||++|||+||
T Consensus 34 ~GGLv~al~~~~---~~~Wvgw~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H 108 (496)
T 3t5t_A 34 TGNVVAEQAGVL---NISWIASADSEDDRR--ASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANN 108 (496)
T ss_dssp HHHHHHHHHHHH---TCCEEEECCSHHHHH--HHHHCTTCEEEECTTSCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHT
T ss_pred CCchHHHHhhhc---CCEEEecCCCccchh--hhhccccccccccccCCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhc
Confidence 499999999999 799999998643210 000000000001112457899999999999999999999999999999
Q ss_pred cCccc------cccCcccchhhhh
Q psy2719 81 SMPDR------AVFNAETWKVSHL 98 (808)
Q Consensus 81 ~~~~~------~~~~~~~w~~y~~ 98 (808)
|+++. ..|++++|+.|+.
T Consensus 109 ~~~~~~~~p~~~~~~~~~w~~Y~~ 132 (496)
T 3t5t_A 109 YGWDRWTQPSFGSDAREGWADFGR 132 (496)
T ss_dssp TCCCSSSCCCBCHHHHHHHHHHHH
T ss_pred cccccCCCCccchhhHHHHHHHHH
Confidence 98533 3455689999874
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=8.7e-16 Score=175.40 Aligned_cols=102 Identities=25% Similarity=0.535 Sum_probs=80.2
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||.+++++.+|+||||+|..++ . + ++.. .....+++|.||+|+++++++||+||||++|||+||
T Consensus 21 ~ggl~~~l~~~~~~~~~~wvgw~g~~~~-~-----~-~~~~---~~~~~~~~~~~v~l~~~~~~~~y~gf~~~~lWp~~H 90 (482)
T 1uqt_A 21 AGGLAVGILGALKAAGGLWFGWSGETGN-E-----D-QPLK---KVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFH 90 (482)
T ss_dssp CCHHHHHHHHHHHHHCEEEEEEEEEESC-C-----S-SCCE---EEEETTEEEEEEEECHHHHHHHTTTHHHHTHHHHHT
T ss_pred CCcHHHHHHHHHhhCCCEEEeCCCCCCc-c-----c-chhh---hhccCCceEEEEECCHHHHHHHHHHhhhhhcccccc
Confidence 5999999999999999999999986521 1 0 1110 112346899999999999999999999999999999
Q ss_pred cCccccccCcccchhhhhhcccc--------ccccceeeee
Q psy2719 81 SMPDRAVFNAETWKVSHLKMNGV--------TLEITGIWIG 113 (808)
Q Consensus 81 ~~~~~~~~~~~~w~~y~~k~~g~--------~~~~~~~wig 113 (808)
|+++...|++.+|..|.. +|.. .+....+||-
T Consensus 91 ~~~~~~~~~~~~w~~y~~-vN~~fa~~l~~~~~~~DiV~vH 130 (482)
T 1uqt_A 91 YRLDLVQFQRPAWDGYLR-VNALLADKLLPLLQDDDIIWIH 130 (482)
T ss_dssp TCGGGCCCCHHHHHHHHH-HHHHHHHHHGGGCCTTCEEEEE
T ss_pred CcCCccccCHHHHHHHHH-HHHHHHHHHHHhcCCCCEEEEE
Confidence 999999999999999874 3331 2234567765
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=6.1e-14 Score=153.82 Aligned_cols=191 Identities=15% Similarity=0.094 Sum_probs=131.9
Q ss_pred EEEEeecCcCccccchhhcCchhhhhcCCCe-EEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEE-EEEEcCCCCC
Q psy2719 282 HVKALPIGIPFERFVQLAENAPENLKDENLK-VILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTF-LQISVPSRTD 359 (808)
Q Consensus 282 ~v~v~p~GID~~~f~~~~~~~~~~~~~~~~~-iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~l-v~ig~~~~~~ 359 (808)
++.++|+|+|.+.|.+... ........+++ +++++||+.+.||++.+++|++.+.+ ++.+ +++|.+
T Consensus 155 ~~~~i~n~v~~~~~~~~~~-~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~-------~~~~l~i~G~~---- 222 (364)
T 1f0k_A 155 NAEVVGNPVRTDVLALPLP-QQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD-------SVTIWHQSGKG---- 222 (364)
T ss_dssp SCEECCCCCCHHHHTSCCH-HHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG-------GEEEEEECCTT----
T ss_pred CceEeCCccchhhcccchh-hhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC-------CcEEEEEcCCc----
Confidence 4668999999887654211 01110113445 55566799999999999999998743 2343 334421
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEE
Q psy2719 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLI 439 (808)
Q Consensus 360 ~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vV 439 (808)
+ ++ ++++++.+.+. ..|. +.|.+ +++..+|+.||++|+|| | |++++|||||+ .|+|
T Consensus 223 -~-~~----~l~~~~~~~~~-------~~v~-~~g~~--~~~~~~~~~ad~~v~~s---g-~~~~~EAma~G----~Pvi 278 (364)
T 1f0k_A 223 -S-QQ----SVEQAYAEAGQ-------PQHK-VTEFI--DDMAAAYAWADVVVCRS---G-ALTVSEIAAAG----LPAL 278 (364)
T ss_dssp -C-HH----HHHHHHHHTTC-------TTSE-EESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHHT----CCEE
T ss_pred -h-HH----HHHHHHhhcCC-------CceE-Eecch--hhHHHHHHhCCEEEECC---c-hHHHHHHHHhC----CCEE
Confidence 1 22 33444444321 1344 45777 68899999999999999 4 99999999996 5699
Q ss_pred EcCCCCCcc-------cc---CceEEECCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHH
Q psy2719 440 LSPFAGAGG-------MM---HEALLVNPYE--IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 440 lS~~~G~~~-------~l---~~~llvnP~d--~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 507 (808)
+|...|... .+ +.|++++|.| +++++++|.++ +++.+.+..+++++.+..++++.-++.+++.++
T Consensus 279 ~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 355 (364)
T 1f0k_A 279 FVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVAR 355 (364)
T ss_dssp ECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHT
T ss_pred EeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHH
Confidence 998887632 34 2499999988 99999999988 456666666677777788888888888877777
Q ss_pred cccc
Q psy2719 508 ALDN 511 (808)
Q Consensus 508 ~~~~ 511 (808)
+..+
T Consensus 356 ~~~~ 359 (364)
T 1f0k_A 356 ALEH 359 (364)
T ss_dssp TC--
T ss_pred HHHh
Confidence 6544
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.44 E-value=1.6e-12 Score=143.33 Aligned_cols=167 Identities=13% Similarity=0.073 Sum_probs=111.4
Q ss_pred EEEEEEeecC-cCccccchhhcCchhhhhc--CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCC
Q psy2719 280 TVHVKALPIG-IPFERFVQLAENAPENLKD--ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPS 356 (808)
Q Consensus 280 ~~~v~v~p~G-ID~~~f~~~~~~~~~~~~~--~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~ 356 (808)
..++.+++++ +|...+.+... ..+++ .++.+++++||+...||+..+++|++++.+++|+++ +++++++
T Consensus 168 ~~ki~vi~n~~~d~~~~~~~~~---~~~~~~~~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~----lv~~~g~- 239 (376)
T 1v4v_A 168 EEGILVTGQTGVDAVLLAAKLG---RLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLT----FVYPVHL- 239 (376)
T ss_dssp GGGEEECCCHHHHHHHHHHHHC---CCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSE----EEEECCS-
T ss_pred cceEEEECCchHHHHhhhhhhh---HHHHhcCCCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeE----EEEECCC-
Confidence 3467778875 45433322111 11111 234567789999999999999999999988888763 5543222
Q ss_pred CCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCc
Q psy2719 357 RTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPG 436 (808)
Q Consensus 357 ~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g 436 (808)
.+ .++++++++++. . ..|+ +.+.++..++..+|+.||++|.|| +|+ .+|||||+.
T Consensus 240 ---~~---~~~~~l~~~~~~-------~--~~v~-~~g~~g~~~~~~~~~~ad~~v~~S--~g~---~lEA~a~G~---- 294 (376)
T 1v4v_A 240 ---NP---VVREAVFPVLKG-------V--RNFV-LLDPLEYGSMAALMRASLLLVTDS--GGL---QEEGAALGV---- 294 (376)
T ss_dssp ---CH---HHHHHHHHHHTT-------C--TTEE-EECCCCHHHHHHHHHTEEEEEESC--HHH---HHHHHHTTC----
T ss_pred ---CH---HHHHHHHHHhcc-------C--CCEE-EECCCCHHHHHHHHHhCcEEEECC--cCH---HHHHHHcCC----
Confidence 12 234555555421 0 1344 557888889999999999999999 543 889999964
Q ss_pred eEEEcCC-CCCccccC--ceEEECCCCHHHHHHHHHHHhCCCHHHHHH
Q psy2719 437 VLILSPF-AGAGGMMH--EALLVNPYEIDAAANVLHRALCMPRDEREL 481 (808)
Q Consensus 437 ~vVlS~~-~G~~~~l~--~~llvnP~d~~~lA~ai~~~L~~~~~e~~~ 481 (808)
|+|++.. +|..+.+. .|++|+ .|+++++++|.++|+. ++.+++
T Consensus 295 PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~la~~i~~ll~d-~~~~~~ 340 (376)
T 1v4v_A 295 PVVVLRNVTERPEGLKAGILKLAG-TDPEGVYRVVKGLLEN-PEELSR 340 (376)
T ss_dssp CEEECSSSCSCHHHHHHTSEEECC-SCHHHHHHHHHHHHTC-HHHHHH
T ss_pred CEEeccCCCcchhhhcCCceEECC-CCHHHHHHHHHHHHhC-hHhhhh
Confidence 5777654 44444442 488886 4999999999999984 444433
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.3e-12 Score=144.70 Aligned_cols=158 Identities=12% Similarity=-0.005 Sum_probs=108.8
Q ss_pred eEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCC--CCCCccE
Q psy2719 312 KVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFS--KPNWSPI 389 (808)
Q Consensus 312 ~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g--~~~~~~v 389 (808)
++++++++ ..||++.+++|++++.+++|+++ |+++|. +++. .+++++++.+.+..+. ..+...
T Consensus 197 ~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~----lvivG~-----g~~~---~~~l~~~~~~~gl~~~~~~~~~~~- 261 (374)
T 2xci_A 197 EFIVAGSI--HTGEVEIILKAFKEIKKTYSSLK----LILVPR-----HIEN---AKIFEKKARDFGFKTSFFENLEGD- 261 (374)
T ss_dssp CEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCE----EEEEES-----SGGG---HHHHHHHHHHTTCCEEETTCCCSS-
T ss_pred CEEEEEeC--CCchHHHHHHHHHHHHhhCCCcE----EEEECC-----CHHH---HHHHHHHHHHCCCceEEecCCCCc-
Confidence 67777776 46899999999999998898864 777763 2222 1234455544432210 000012
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCC-CCCCChhHHHHHHhccCCCceEEEc-CCCCCcccc----CceEEECCCCHHH
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPL-RDGMNLVAKEYVACQIREPGVLILS-PFAGAGGMM----HEALLVNPYEIDA 463 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~-~EG~gLv~~Eama~~~~~~g~vVlS-~~~G~~~~l----~~~llvnP~d~~~ 463 (808)
+++.+. .+|+..+|+.||++++||. .|++|++++|||||+ .|+|++ +..|+.+.+ .+|.++.|.|+++
T Consensus 262 v~~~~~--~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G----~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~ 335 (374)
T 2xci_A 262 VILVDR--FGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWG----IPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETE 335 (374)
T ss_dssp EEECCS--SSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTT----CCEEECSCCTTSHHHHHHHHHTTCEEECCSHHH
T ss_pred EEEECC--HHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhC----CCEEECCCccChHHHHHHHHHCCCEEEeCCHHH
Confidence 345554 3689999999999888764 577899999999996 457765 455555544 2588899999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHhHHHhc
Q psy2719 464 AANVLHRALCMPRDERELRMSQLRHREQQ 492 (808)
Q Consensus 464 lA~ai~~~L~~~~~e~~~r~~~~~~~v~~ 492 (808)
+|++|.++|+. +.++++.+++++++++
T Consensus 336 La~ai~~ll~d--~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 336 LVTKLTELLSV--KKEIKVEEKSREIKGC 362 (374)
T ss_dssp HHHHHHHHHHS--CCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhH--HHHHHHHHHHHHHHHh
Confidence 99999999973 5555555666666644
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.9e-09 Score=120.17 Aligned_cols=133 Identities=17% Similarity=0.178 Sum_probs=92.4
Q ss_pred CeE-EEEEcCcc-ccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy2719 311 LKV-ILGVDRLD-YTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSP 388 (808)
Q Consensus 311 ~~i-il~V~Rl~-~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~ 388 (808)
+++ ++..+|.. ..|++..+++|++++.+++|+++ +++.+.+. + .+++.++++. +. ...
T Consensus 230 ~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~----~v~~~g~~----~---~~~~~l~~~~---~~------~~~ 289 (396)
T 3dzc_A 230 KKLILVTGHRRESFGGGFERICQALITTAEQHPECQ----ILYPVHLN----P---NVREPVNKLL---KG------VSN 289 (396)
T ss_dssp SEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEE----EEEECCBC----H---HHHHHHHHHT---TT------CTT
T ss_pred CCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCce----EEEEeCCC----h---HHHHHHHHHH---cC------CCC
Confidence 444 45566754 34889999999999999888753 55433221 2 2344444432 11 124
Q ss_pred EEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEc-CCCCCccccC--ceEEECCCCHHHHH
Q psy2719 389 IRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILS-PFAGAGGMMH--EALLVNPYEIDAAA 465 (808)
Q Consensus 389 v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS-~~~G~~~~l~--~~llvnP~d~~~lA 465 (808)
|. +.+++++.++..+|+.||++|.+| | |++ +|||+|++ |+|++ +.++..+.+. .+++|++ |+++++
T Consensus 290 v~-~~~~lg~~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~G~----PvV~~~~~~~~~e~v~~G~~~lv~~-d~~~l~ 358 (396)
T 3dzc_A 290 IV-LIEPQQYLPFVYLMDRAHIILTDS---G-GIQ-EEAPSLGK----PVLVMRETTERPEAVAAGTVKLVGT-NQQQIC 358 (396)
T ss_dssp EE-EECCCCHHHHHHHHHHCSEEEESC---S-GGG-TTGGGGTC----CEEECCSSCSCHHHHHHTSEEECTT-CHHHHH
T ss_pred EE-EeCCCCHHHHHHHHHhcCEEEECC---c-cHH-HHHHHcCC----CEEEccCCCcchHHHHcCceEEcCC-CHHHHH
Confidence 54 557888889999999999999999 6 666 99999964 57777 4444444342 4677765 899999
Q ss_pred HHHHHHhCC
Q psy2719 466 NVLHRALCM 474 (808)
Q Consensus 466 ~ai~~~L~~ 474 (808)
++|.++|+.
T Consensus 359 ~ai~~ll~d 367 (396)
T 3dzc_A 359 DALSLLLTD 367 (396)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHcC
Confidence 999999974
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.6e-09 Score=119.28 Aligned_cols=164 Identities=9% Similarity=0.085 Sum_probs=105.8
Q ss_pred EEEEEEeec-CcCccccchhhcCchhhhhc--CCCeEEEEEcCccc-cCChHHHHHHHHHHHHhCCCccCcEEEEEEEcC
Q psy2719 280 TVHVKALPI-GIPFERFVQLAENAPENLKD--ENLKVILGVDRLDY-TKGLVHRIKAFERLLEKHPEYVEKVTFLQISVP 355 (808)
Q Consensus 280 ~~~v~v~p~-GID~~~f~~~~~~~~~~~~~--~~~~iil~V~Rl~~-~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~ 355 (808)
..+|.++++ ++|...+.+........+++ .++.+++.++|... .|++..+++|++++.+++|+++ ++..+.+
T Consensus 191 ~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~----~v~~~~~ 266 (403)
T 3ot5_A 191 PATIFVTGNTAIDALKTTVQKDYHHPILENLGDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTE----LVYPMHL 266 (403)
T ss_dssp GGGEEECCCHHHHHHHHHSCTTCCCHHHHSCTTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEE----EEEECCS
T ss_pred cccEEEeCCchHHHHHhhhhhhcchHHHHhccCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCce----EEEecCC
Confidence 345666665 67755443221111122221 23445667888754 4789999999999999998753 5544333
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCC
Q psy2719 356 SRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREP 435 (808)
Q Consensus 356 ~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~ 435 (808)
. + .+++.+++.. +. ...|. +.+++++.++..+|+.||++|.+| |-+.+||++|++
T Consensus 267 ~----~---~~~~~l~~~~---~~------~~~v~-l~~~l~~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~--- 321 (403)
T 3ot5_A 267 N----P---AVREKAMAIL---GG------HERIH-LIEPLDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGV--- 321 (403)
T ss_dssp C----H---HHHHHHHHHH---TT------CTTEE-EECCCCHHHHHHHHHHEEEEEECC-----HHHHHHGGGTTC---
T ss_pred C----H---HHHHHHHHHh---CC------CCCEE-EeCCCCHHHHHHHHHhcCEEEECC-----ccHHHHHHHhCC---
Confidence 2 2 2344444432 11 12444 568889999999999999999988 334499999964
Q ss_pred ceEEEc-CCCCCccccC--ceEEECCCCHHHHHHHHHHHhCC
Q psy2719 436 GVLILS-PFAGAGGMMH--EALLVNPYEIDAAANVLHRALCM 474 (808)
Q Consensus 436 g~vVlS-~~~G~~~~l~--~~llvnP~d~~~lA~ai~~~L~~ 474 (808)
|+|++ +.++..+.+. .+++|++ |+++++++|.++|+.
T Consensus 322 -PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~l~~ai~~ll~~ 361 (403)
T 3ot5_A 322 -PVLVLRDTTERPEGIEAGTLKLIGT-NKENLIKEALDLLDN 361 (403)
T ss_dssp -CEEECCSSCSCHHHHHHTSEEECCS-CHHHHHHHHHHHHHC
T ss_pred -CEEEecCCCcchhheeCCcEEEcCC-CHHHHHHHHHHHHcC
Confidence 57777 4444334342 4788876 999999999999974
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.98 E-value=2.3e-10 Score=119.90 Aligned_cols=66 Identities=9% Similarity=-0.005 Sum_probs=46.9
Q ss_pred EEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEeC--CCCcccc---ccccccCc
Q psy2719 736 IEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRVD--SSPTVKS---SWKQGSNH 805 (808)
Q Consensus 736 vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~--~~~~vk~---~A~~~~~~ 805 (808)
.|+.+. +..|+.+++.++++ +|++.+ ++++|| |++|++.+|-..+.|..+ ..+++++ .|+|++++
T Consensus 176 ~~~~~~-~kp~~~~~~~~~~~-lgi~~~---~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~ 250 (266)
T 3pdw_A 176 VQPVFI-GKPESIIMEQAMRV-LGTDVS---ETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDS 250 (266)
T ss_dssp CCCEEC-STTSSHHHHHHHHH-HTCCGG---GEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESS
T ss_pred CCcccc-CCCCHHHHHHHHHH-cCCChh---hEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCC
Confidence 345555 78899999999997 899875 899999 999999996222223333 2466777 49999886
Q ss_pred C
Q psy2719 806 T 806 (808)
Q Consensus 806 ~ 806 (808)
.
T Consensus 251 ~ 251 (266)
T 3pdw_A 251 L 251 (266)
T ss_dssp G
T ss_pred H
Confidence 3
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=2.4e-09 Score=105.57 Aligned_cols=55 Identities=20% Similarity=0.271 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+|+.+++.++++ +|++++ ++++|| |++|++.++ ++++|++ .+.+++.|+|++.++
T Consensus 83 ~k~~~~~~~~~~-~~~~~~---~~~~vGD~~~Di~~~~~ag---~~~~~~~~~~~~~~~ad~v~~~~ 142 (180)
T 1k1e_A 83 EKETACFDLMKQ-AGVTAE---QTAYIGDDSVDLPAFAACG---TSFAVADAPIYVKNAVDHVLSTH 142 (180)
T ss_dssp CHHHHHHHHHHH-HTCCGG---GEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHTTSSEECSSC
T ss_pred CcHHHHHHHHHH-cCCCHH---HEEEECCCHHHHHHHHHcC---CeEEeCCccHHHHhhCCEEecCC
Confidence 799999999986 898865 799999 999999984 5588886 578899999999865
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.82 E-value=3.7e-09 Score=110.75 Aligned_cols=59 Identities=12% Similarity=-0.050 Sum_probs=44.2
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEeCC-CCcccc--------ccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRVDS-SPTVKS--------SWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~~-~~~vk~--------~A~~~~~~ 805 (808)
+-.|+.+++.++++ +|++.+ ++++|| |+.|.+.+|-.++.|++++ ..+.++ .|+|++++
T Consensus 186 ~kp~~~~~~~~~~~-~~~~~~---~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~ 258 (268)
T 3qgm_A 186 GKPSEVIMREALDI-LGLDAK---DVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNS 258 (268)
T ss_dssp STTSHHHHHHHHHH-HTCCGG---GEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESS
T ss_pred CCCCHHHHHHHHHH-hCCCch---hEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECC
Confidence 67899999999997 899875 799999 8999999963334455554 333333 68888765
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.80 E-value=5.3e-11 Score=129.52 Aligned_cols=61 Identities=7% Similarity=-0.074 Sum_probs=44.7
Q ss_pred EeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhcc-CCccEEEeCC-CCccccccccccCcC
Q psy2719 738 AKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQ-GIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 738 v~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~-~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+.|+ +++||.|++.+-.. -+.. .+++|| |++||+.+. ..|++|+| | .+++|+.|+|++.++
T Consensus 201 i~~~-g~~K~~al~gi~~~-~~~~-----~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~~Ad~v~~~~ 267 (332)
T 1y8a_A 201 KAVG-AGEKAKIMRGYCES-KGID-----FPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALKHADVVIISP 267 (332)
T ss_dssp BCCC-HHHHHHHHHHHHHH-HTCS-----SCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHTTCSEEEECS
T ss_pred ecCC-CCCHHHHHhccChh-hcCc-----eEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHhhCcEEecCC
Confidence 8887 99999999843221 0110 299999 999999981 01245889 6 588999999999864
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=98.74 E-value=6.8e-09 Score=108.69 Aligned_cols=66 Identities=20% Similarity=0.291 Sum_probs=50.8
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++|+||+||||++ ++..+ ++++++|++++++ |+
T Consensus 5 ~kli~~DlDGTLl~-----~~~~i-~~~~eal~~l~~~----------------------------------------G~ 38 (264)
T 3epr_A 5 YKGYLIDLDGTIYK-----GKSRI-PAGERFIERLQEK----------------------------------------GI 38 (264)
T ss_dssp CCEEEECCBTTTEE-----TTEEC-HHHHHHHHHHHHH----------------------------------------TC
T ss_pred CCEEEEeCCCceEe-----CCEEC-cCHHHHHHHHHHC----------------------------------------CC
Confidence 46999999999998 34567 8999999999987 99
Q ss_pred eEEEEe---CCChhhHHHhcC---c--cceEEEcccceeE
Q psy2719 623 NIGIIS---GRTLENLMKMVN---I--EKVTYAGSHGLEI 654 (808)
Q Consensus 623 ~v~I~S---GR~~~~l~~~~~---~--~~~~li~~nG~~i 654 (808)
.|+++| ||+...+...+. + ....+++.||+.+
T Consensus 39 ~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 78 (264)
T 3epr_A 39 PYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATV 78 (264)
T ss_dssp CEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHH
T ss_pred eEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHHHH
Confidence 999999 777777766553 2 1224667777654
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.68 E-value=2.3e-09 Score=109.80 Aligned_cols=64 Identities=6% Similarity=-0.190 Sum_probs=49.1
Q ss_pred EEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCc-cEEEeCC-C-Cccc---cccccccC
Q psy2719 736 IEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIA-CTFRVDS-S-PTVK---SSWKQGSN 804 (808)
Q Consensus 736 vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~-~~vav~~-~-~~vk---~~A~~~~~ 804 (808)
.|+.+. +.+|+.+++.++++ +|++++ ++++|| |++|++.+| .+ +.|++++ . ++++ ..|+|+++
T Consensus 169 ~~~~~~-~kpk~~~~~~~~~~-lgi~~~---~~i~iGD~~~nDi~~~~~aG-~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 169 RKPFYV-GKPSPWIIRAALNK-MQAHSE---ETVIVGDNLRTDILAGFQAG-LETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp CCCEEC-STTSTHHHHHHHHH-HTCCGG---GEEEEESCTTTHHHHHHHTT-CEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred CCceEe-CCCCHHHHHHHHHH-cCCCcc---eEEEECCCchhHHHHHHHcC-CeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 466666 89999999999997 899875 899999 899999996 33 3344554 2 5565 47899887
Q ss_pred c
Q psy2719 805 H 805 (808)
Q Consensus 805 ~ 805 (808)
+
T Consensus 243 ~ 243 (250)
T 2c4n_A 243 S 243 (250)
T ss_dssp S
T ss_pred C
Confidence 5
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.60 E-value=8.5e-08 Score=93.46 Aligned_cols=55 Identities=11% Similarity=0.175 Sum_probs=48.9
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+|+.+++.++++ +|++++ ++++|| |++|++.++ ++++|+| .+++|+.|+|+++++
T Consensus 83 ~K~~~l~~~~~~-~gi~~~---~~~~vGD~~nDi~~~~~ag---~~~a~~na~~~~k~~Ad~v~~~~ 142 (168)
T 3ewi_A 83 DKLATVDEWRKE-MGLCWK---EVAYLGNEVSDEECLKRVG---LSAVPADACSGAQKAVGYICKCS 142 (168)
T ss_dssp CHHHHHHHHHHH-TTCCGG---GEEEECCSGGGHHHHHHSS---EEEECTTCCHHHHTTCSEECSSC
T ss_pred ChHHHHHHHHHH-cCcChH---HEEEEeCCHhHHHHHHHCC---CEEEeCChhHHHHHhCCEEeCCC
Confidence 699999999997 899875 799999 999999994 5699997 588999999999875
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=2.8e-08 Score=104.08 Aligned_cols=45 Identities=16% Similarity=0.019 Sum_probs=36.1
Q ss_pred eCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEeC
Q psy2719 739 KPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRVD 790 (808)
Q Consensus 739 ~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~ 790 (808)
.+. +.+|+.+++.++++ +|++++ ++++|| |++|++.+| .+ ++.|.
T Consensus 191 ~~~-~kpk~~~~~~~~~~-lgi~~~---e~i~iGD~~~nDi~~a~~aG-~~-~i~v~ 240 (271)
T 1vjr_A 191 LIA-GKPNPLVVDVISEK-FGVPKE---RMAMVGDRLYTDVKLGKNAG-IV-SILVL 240 (271)
T ss_dssp EEC-STTSTHHHHHHHHH-HTCCGG---GEEEEESCHHHHHHHHHHHT-CE-EEEES
T ss_pred ccC-CCCCHHHHHHHHHH-hCCCCc---eEEEECCCcHHHHHHHHHcC-Ce-EEEEC
Confidence 555 78999999999997 899875 899999 888999986 33 34454
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=5.5e-09 Score=104.16 Aligned_cols=56 Identities=11% Similarity=0.118 Sum_probs=48.9
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~ 805 (808)
+.+|+.++..++++ +|++++ ++++|| |++|++.+| ++++|+..+++|+.|++++++
T Consensus 141 ~~~K~~~l~~~~~~-lgi~~~---~~~~iGD~~~Di~~~~~ag---~~~~~~~~~~~~~~a~~v~~~ 200 (211)
T 1l7m_A 141 ENAKGEILEKIAKI-EGINLE---DTVAVGDGANDISMFKKAG---LKIAFCAKPILKEKADICIEK 200 (211)
T ss_dssp TTHHHHHHHHHHHH-HTCCGG---GEEEEECSGGGHHHHHHCS---EEEEESCCHHHHTTCSEEECS
T ss_pred CccHHHHHHHHHHH-cCCCHH---HEEEEecChhHHHHHHHCC---CEEEECCCHHHHhhcceeecc
Confidence 67999999999997 899875 799999 999999995 458888777889999999986
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=2.2e-06 Score=93.16 Aligned_cols=133 Identities=11% Similarity=0.060 Sum_probs=92.0
Q ss_pred CCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy2719 310 NLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPI 389 (808)
Q Consensus 310 ~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v 389 (808)
++++|+++||+.....+. .+ .|++ .|+++|.+... + . .+|
T Consensus 177 ~~~~i~yaG~l~k~~~L~----~l------~~~~----~f~ivG~G~~~-----------------~-------l--~nV 216 (339)
T 3rhz_A 177 LKREIHFPGNPERFSFVK----EW------KYDI----PLKVYTWQNVE-----------------L-------P--QNV 216 (339)
T ss_dssp EEEEEEECSCTTTCGGGG----GC------CCSS----CEEEEESCCCC-----------------C-------C--TTE
T ss_pred CCcEEEEeCCcchhhHHH----hC------CCCC----eEEEEeCCccc-----------------C-------c--CCE
Confidence 457899999998532222 11 3554 48888854311 0 1 135
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCCCCC---------CChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEEC
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPLRDG---------MNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVN 457 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~~EG---------~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvn 457 (808)
+ |.|.++.+|++.+|+.||+.+++ .++ ++.-+.|||||+ .|+|++..++..+.+. .|+.++
T Consensus 217 ~-f~G~~~~~el~~~l~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~G----~PVI~~~~~~~~~~v~~~~~G~~~~ 289 (339)
T 3rhz_A 217 H-KINYRPDEQLLMEMSQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAAG----IPVIVQEGIANQELIENNGLGWIVK 289 (339)
T ss_dssp E-EEECCCHHHHHHHHHTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHHT----CCEEEETTCTTTHHHHHHTCEEEES
T ss_pred E-EeCCCCHHHHHHHHHhCCEEEEE--CCCchhHHHHhcChHHHHHHHHcC----CCEEEccChhHHHHHHhCCeEEEeC
Confidence 4 56999999999999999988887 233 477899999996 4688898887777774 488886
Q ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCC
Q psy2719 458 PYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLD 494 (808)
Q Consensus 458 P~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~ 494 (808)
+.++++++|..+ .++++.++.+++++..+..+
T Consensus 290 --~~~e~~~~i~~l---~~~~~~~m~~na~~~a~~~~ 321 (339)
T 3rhz_A 290 --DVEEAIMKVKNV---NEDEYIELVKNVRSFNPILR 321 (339)
T ss_dssp --SHHHHHHHHHHC---CHHHHHHHHHHHHHHTHHHH
T ss_pred --CHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHhh
Confidence 578888888864 45666666566665544433
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.50 E-value=2.9e-07 Score=91.96 Aligned_cols=56 Identities=14% Similarity=0.074 Sum_probs=48.6
Q ss_pred CCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 744 WDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
-+|+.+++.++++ +|++++ ++++|| |++|++.++ ++++|+| .+.+|+.|+|++.++
T Consensus 99 k~k~~~~~~~~~~-~~~~~~---~~~~vGD~~nDi~~~~~ag---~~va~~na~~~~~~~ad~v~~~~ 159 (195)
T 3n07_A 99 DDKVQAYYDICQK-LAIAPE---QTGYIGDDLIDWPVMEKVA---LRVCVADGHPLLAQRANYVTHIK 159 (195)
T ss_dssp SSHHHHHHHHHHH-HCCCGG---GEEEEESSGGGHHHHTTSS---EEEECTTSCHHHHHHCSEECSSC
T ss_pred CCcHHHHHHHHHH-hCCCHH---HEEEEcCCHHHHHHHHHCC---CEEEECChHHHHHHhCCEEEcCC
Confidence 3799999999997 899875 799999 999999984 5699997 578999999999875
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.47 E-value=1e-07 Score=93.63 Aligned_cols=56 Identities=14% Similarity=0.144 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 744 WDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
.+|+.+++.++++ +|++++ ++++|| |++|++.++ ++++|++ .+.+++.|++++.++
T Consensus 85 ~~k~~~l~~~~~~-~~~~~~---~~~~vGD~~nD~~~~~~ag---~~v~~~~~~~~~~~~ad~v~~~~ 145 (176)
T 3mmz_A 85 DRKDLALKQWCEE-QGIAPE---RVLYVGNDVNDLPCFALVG---WPVAVASAHDVVRGAARAVTTVP 145 (176)
T ss_dssp SCHHHHHHHHHHH-HTCCGG---GEEEEECSGGGHHHHHHSS---EEEECTTCCHHHHHHSSEECSSC
T ss_pred CChHHHHHHHHHH-cCCCHH---HEEEEcCCHHHHHHHHHCC---CeEECCChhHHHHHhCCEEecCC
Confidence 4799999999997 898875 799999 999999994 5599986 577899999998763
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.4e-07 Score=89.16 Aligned_cols=55 Identities=13% Similarity=0.093 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
.|..+++.++++ ++++++ +++++| |+.|.+.+| +.+++.+ .+.+++.|+|++.+.
T Consensus 84 p~~~~~~~~~~~-~~~~~~---~~~~vGD~~~Di~~a~~ag---~~~~~~~~~~~~~~~a~~v~~~~ 143 (162)
T 2p9j_A 84 KKLEIYEKIKEK-YSLKDE---EIGFIGDDVVDIEVMKKVG---FPVAVRNAVEEVRKVAVYITQRN 143 (162)
T ss_dssp -CHHHHHHHHHH-TTCCGG---GEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCSEECSSC
T ss_pred CCHHHHHHHHHH-cCCCHH---HEEEECCCHHHHHHHHHCC---CeEEecCccHHHHhhCCEEecCC
Confidence 678899999986 888865 799999 999999884 4577875 567888999998763
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.2e-07 Score=98.43 Aligned_cols=40 Identities=13% Similarity=0.052 Sum_probs=34.6
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhcc
Q psy2719 737 EAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQ 781 (808)
Q Consensus 737 Ev~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~ 781 (808)
|+.+. +.+|+.+++.++++ +|++++ ++++|| |++|++.+|
T Consensus 184 ~~~~~-~kpk~~~~~~~~~~-lgi~~~---~~i~iGD~~~nDi~~a~~aG 228 (271)
T 2x4d_A 184 KAEVV-GKPSPEFFKSALQA-IGVEAH---QAVMIGDDIVGDVGGAQRCG 228 (271)
T ss_dssp CCEEE-STTCHHHHHHHHHH-HTCCGG---GEEEEESCTTTTHHHHHHTT
T ss_pred ceeec-cCCCHHHHHHHHHH-hCCCcc---eEEEECCCcHHHHHHHHHCC
Confidence 55565 78999999999997 899875 799999 899999996
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=8.8e-07 Score=87.76 Aligned_cols=56 Identities=13% Similarity=0.101 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 744 WDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
..|+.+++.++++ +|++++ ++++|| |++|++.+ |+++++++ .+++++.|+|++++.
T Consensus 100 kpk~~~~~~~~~~-~g~~~~---~~~~iGD~~~Di~~a~~a---g~~~~~~~~~~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 100 SNKLIAFSDLLEK-LAIAPE---NVAYVGDDLIDWPVMEKV---GLSVAVADAHPLLIPRADYVTRIA 160 (188)
T ss_dssp SCSHHHHHHHHHH-HTCCGG---GEEEEESSGGGHHHHTTS---SEEEECTTSCTTTGGGSSEECSSC
T ss_pred CCCHHHHHHHHHH-cCCCHH---HEEEECCCHHHHHHHHHC---CCEEEecCcCHHHHhcCCEEEeCC
Confidence 4789999999987 898865 799999 89999888 45588885 578899999998864
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.39 E-value=7.9e-07 Score=88.44 Aligned_cols=55 Identities=20% Similarity=0.246 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+|+.+++.++++ +|++++ ++++|| |++|++.++ ++++|++ .+.+++.|+|++.++
T Consensus 94 pk~~~~~~~~~~-~~~~~~---~~~~vGD~~~Di~~~~~ag---~~~~~~~~~~~~~~~ad~v~~~~ 153 (191)
T 3n1u_A 94 DKRSAYQHLKKT-LGLNDD---EFAYIGDDLPDLPLIQQVG---LGVAVSNAVPQVLEFADWRTERT 153 (191)
T ss_dssp SCHHHHHHHHHH-HTCCGG---GEEEEECSGGGHHHHHHSS---EEEECTTCCHHHHHHSSEECSSC
T ss_pred ChHHHHHHHHHH-hCCCHH---HEEEECCCHHHHHHHHHCC---CEEEeCCccHHHHHhCCEEecCC
Confidence 689999999986 898865 799999 999999994 5588986 578999999999864
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=5e-07 Score=87.10 Aligned_cols=55 Identities=11% Similarity=0.093 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
.|..+++.++++ ++++++ ++++|| |++|++.++ ++++|++ .+.+++.|+|++.++
T Consensus 79 pk~~~~~~~~~~-~~~~~~---~~~~vGD~~~Di~~~~~ag---~~~~~~~~~~~~~~~ad~v~~~~ 138 (164)
T 3e8m_A 79 DKLSAAEELCNE-LGINLE---QVAYIGDDLNDAKLLKRVG---IAGVPASAPFYIRRLSTIFLEKR 138 (164)
T ss_dssp CHHHHHHHHHHH-HTCCGG---GEEEECCSGGGHHHHTTSS---EEECCTTSCHHHHTTCSSCCCCC
T ss_pred ChHHHHHHHHHH-cCCCHH---HEEEECCCHHHHHHHHHCC---CeEEcCChHHHHHHhCcEEeccC
Confidence 699999999997 798875 799999 999999884 5588876 578999999999864
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.37 E-value=3.3e-06 Score=93.47 Aligned_cols=135 Identities=8% Similarity=0.049 Sum_probs=86.7
Q ss_pred CCeEEEEEcCcc---ccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCC
Q psy2719 310 NLKVILGVDRLD---YTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNW 386 (808)
Q Consensus 310 ~~~iil~V~Rl~---~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~ 386 (808)
++.+++..+|.. ..|++..+++|++++.+++ ++ .+|.... + .+++.+++.. +. .+ ..
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~-~~----~vv~p~~------p---~~~~~l~~~~---~~-~~--~~ 262 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEY-NF----LIIFSTH------P---RTKKRLEDLE---GF-KE--LG 262 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHH-CC----EEEEEEC------H---HHHHHHHTSG---GG-GG--TG
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcC-Ce----EEEEECC------h---HHHHHHHHHH---HH-hc--CC
Confidence 445666788854 4478999999999998765 44 2333221 2 2333333220 10 00 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCC-CccccC--ceEEECCCCHHH
Q psy2719 387 SPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAG-AGGMMH--EALLVNPYEIDA 463 (808)
Q Consensus 387 ~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G-~~~~l~--~~llvnP~d~~~ 463 (808)
..| .+.+++++.++..+|+.||+++..| |.+..||+++++| +|+..... -.+.+. .+++|++ |.++
T Consensus 263 ~~v-~l~~~lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~P----vv~~~~~ter~e~v~~G~~~lv~~-d~~~ 331 (385)
T 4hwg_A 263 DKI-RFLPAFSFTDYVKLQMNAFCILSDS-----GTITEEASILNLP----ALNIREAHERPEGMDAGTLIMSGF-KAER 331 (385)
T ss_dssp GGE-EECCCCCHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTCC----EEECSSSCSCTHHHHHTCCEECCS-SHHH
T ss_pred CCE-EEEcCCCHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCCC----EEEcCCCccchhhhhcCceEEcCC-CHHH
Confidence 244 4567888889999999999999888 4567999999754 55544332 333342 4677754 9999
Q ss_pred HHHHHHHHhCCC
Q psy2719 464 AANVLHRALCMP 475 (808)
Q Consensus 464 lA~ai~~~L~~~ 475 (808)
+++++.++|+.+
T Consensus 332 i~~ai~~ll~d~ 343 (385)
T 4hwg_A 332 VLQAVKTITEEH 343 (385)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHhCh
Confidence 999999999754
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.28 E-value=1.1e-07 Score=95.28 Aligned_cols=60 Identities=8% Similarity=0.096 Sum_probs=50.6
Q ss_pred eCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccCcC
Q psy2719 739 KPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 739 ~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~~ 806 (808)
.+. +..|+.+++.++++ +|++++ ++++|| |++|++.+| ++++|.+.+++|+.|+|+++++
T Consensus 137 ~~~-~k~k~~~~~~~~~~-~g~~~~---~~i~vGDs~~Di~~a~~aG---~~~~~~~~~~l~~~ad~v~~~~ 200 (217)
T 3m1y_A 137 MMF-SHSKGEMLLVLQRL-LNISKT---NTLVVGDGANDLSMFKHAH---IKIAFNAKEVLKQHATHCINEP 200 (217)
T ss_dssp CCS-TTHHHHHHHHHHHH-HTCCST---TEEEEECSGGGHHHHTTCS---EEEEESCCHHHHTTCSEEECSS
T ss_pred CCC-CCChHHHHHHHHHH-cCCCHh---HEEEEeCCHHHHHHHHHCC---CeEEECccHHHHHhcceeeccc
Confidence 444 78999999999997 899875 799999 999999984 5588855788999999999865
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.27 E-value=9.4e-07 Score=87.67 Aligned_cols=56 Identities=11% Similarity=0.111 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 744 WDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
.+|..+++.++++ +|++++ ++++|| |++|++.++ ++++|++ .+++++.|++++.++
T Consensus 93 ~~K~~~~~~~~~~-~g~~~~---~~~~vGD~~nDi~~~~~ag---~~~~~~~~~~~~~~~ad~v~~~~ 153 (189)
T 3mn1_A 93 EDKLVVLDKLLAE-LQLGYE---QVAYLGDDLPDLPVIRRVG---LGMAVANAASFVREHAHGITRAQ 153 (189)
T ss_dssp SCHHHHHHHHHHH-HTCCGG---GEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHTSSEECSSC
T ss_pred CChHHHHHHHHHH-cCCChh---HEEEECCCHHHHHHHHHCC---CeEEeCCccHHHHHhCCEEecCC
Confidence 4799999999987 898875 799999 999999994 5589986 578899999998864
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.26 E-value=9.1e-07 Score=83.24 Aligned_cols=69 Identities=16% Similarity=0.194 Sum_probs=48.6
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.++||+|+||||++... +....+.+.++++|++|+++ |+
T Consensus 3 ~k~i~~DlDGTL~~~~~-~~i~~~~~~~~~al~~l~~~----------------------------------------G~ 41 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHRY-PRIGEEIPFAVETLKLLQQE----------------------------------------KH 41 (142)
T ss_dssp CCEEEECCBTTTBCSCT-TSCCCBCTTHHHHHHHHHHT----------------------------------------TC
T ss_pred CeEEEEECcCCCCCCCC-ccccccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 46899999999998431 11123456889999999988 99
Q ss_pred eEEEEeCCC---hhhHHHhcCcc--ceEEEcccce
Q psy2719 623 NIGIISGRT---LENLMKMVNIE--KVTYAGSHGL 652 (808)
Q Consensus 623 ~v~I~SGR~---~~~l~~~~~~~--~~~li~~nG~ 652 (808)
.|+|+|||+ +..+.+++... ...+++.|+-
T Consensus 42 ~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n~P 76 (142)
T 2obb_A 42 RLILWSVREGELLDEAIEWCRARGLEFYAANKDYP 76 (142)
T ss_dssp EEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSST
T ss_pred EEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcCCc
Confidence 999999998 45556665322 2345666643
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.23 E-value=3.5e-06 Score=85.22 Aligned_cols=56 Identities=16% Similarity=0.112 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 744 WDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
-+|+.+++.++++ +|++++ ++++|| |++|++.++ ++++|++ .+.+|+.|++++.++
T Consensus 123 k~K~~~l~~~~~~-lg~~~~---~~~~vGDs~nDi~~~~~ag---~~~a~~~~~~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 123 SDKLVAYHELLAT-LQCQPE---QVAYIGDDLIDWPVMAQVG---LSVAVADAHPLLLPKAHYVTRIK 183 (211)
T ss_dssp SSHHHHHHHHHHH-HTCCGG---GEEEEECSGGGHHHHTTSS---EEEECTTSCTTTGGGSSEECSSC
T ss_pred CChHHHHHHHHHH-cCcCcc---eEEEEcCCHHHHHHHHHCC---CEEEeCCccHHHHhhCCEEEeCC
Confidence 3799999999997 899875 799999 999999984 5699986 578999999999864
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.12 E-value=5.5e-07 Score=90.28 Aligned_cols=55 Identities=11% Similarity=-0.087 Sum_probs=45.2
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEe----CC-CCccccccccccCcC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRV----DS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav----~~-~~~vk~~A~~~~~~~ 806 (808)
.|+.+++.++++ +|++++ ++++|| |++|++.+| ++++| .+ .+.++..|+|++++.
T Consensus 151 p~~~~~~~~~~~-~~i~~~---~~i~iGD~~nDi~~a~~aG---~~~~~~~~~~~~~~~~~~~a~~v~~~~ 214 (226)
T 1te2_A 151 PHPQVYLDCAAK-LGVDPL---TCVALEDSVNGMIASKAAR---MRSIVVPAPEAQNDPRFVLANVKLSSL 214 (226)
T ss_dssp TSTHHHHHHHHH-HTSCGG---GEEEEESSHHHHHHHHHTT---CEEEECCCTTTTTCGGGGGSSEECSCG
T ss_pred CChHHHHHHHHH-cCCCHH---HeEEEeCCHHHHHHHHHcC---CEEEEEcCCCCcccccccccCeEECCH
Confidence 449999999997 899875 799999 999999995 44777 54 456899999999874
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.06 E-value=4.8e-07 Score=91.15 Aligned_cols=65 Identities=8% Similarity=-0.077 Sum_probs=50.1
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-C-Ccc-ccccccccCcC
Q psy2719 737 EAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-S-PTV-KSSWKQGSNHT 806 (808)
Q Consensus 737 Ev~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~-~~v-k~~A~~~~~~~ 806 (808)
|..+. +..|+.+++.++++ +|++++ ++++|| |++|++.+|-..+.|++++ . +++ |..|+|++++.
T Consensus 136 ~~~~~-~kp~~~~~~~~~~~-lgi~~~---~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~ 207 (226)
T 3mc1_A 136 SLDGK-LSTKEDVIRYAMES-LNIKSD---DAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSV 207 (226)
T ss_dssp CTTSS-SCSHHHHHHHHHHH-HTCCGG---GEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSH
T ss_pred CCCCC-CCCCHHHHHHHHHH-hCcCcc---cEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCH
Confidence 34555 78999999999997 899875 799999 9999999974344566664 3 333 68899998763
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.03 E-value=4e-07 Score=91.22 Aligned_cols=57 Identities=7% Similarity=0.098 Sum_probs=44.2
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEe----CC-CCccccc-cccccCcC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRV----DS-SPTVKSS-WKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav----~~-~~~vk~~-A~~~~~~~ 806 (808)
+..|+.+++.++++ +|++++ ++++|| |++|++.+| . +++| .+ .+++++. |+|+++++
T Consensus 144 ~k~~~~~~~~~~~~-~~~~~~---~~i~iGD~~nDi~~~~~aG-~--~~~~~~~~~~~~~~l~~~~ad~v~~~~ 210 (225)
T 3d6j_A 144 HKPDPEGLLLAIDR-LKACPE---EVLYIGDSTVDAGTAAAAG-V--SFTGVTSGMTTAQEFQAYPYDRIISTL 210 (225)
T ss_dssp CTTSTHHHHHHHHH-TTCCGG---GEEEEESSHHHHHHHHHHT-C--EEEEETTSSCCTTGGGGSCCSEEESSG
T ss_pred CCCChHHHHHHHHH-hCCChH---HeEEEcCCHHHHHHHHHCC-C--eEEEECCCCCChHHHhhcCCCEEECCH
Confidence 55778999999997 899875 799999 999999995 3 3444 33 4566666 99998864
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.03 E-value=9.2e-05 Score=85.35 Aligned_cols=152 Identities=9% Similarity=-0.036 Sum_probs=95.6
Q ss_pred CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEE-EEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy2719 311 LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQ-ISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPI 389 (808)
Q Consensus 311 ~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~-ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v 389 (808)
..++.+..|+ .|..+..++++.+++++.|+. +.++. +|. . .+... .+.+++.+. .+. ..+
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s---~L~l~~~g~-~--~g~~~-~~~~~~~~~--GI~--------~Rv 501 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVK---VHFHFALGQ-S--NGITH-PYVERFIKS--YLG--------DSA 501 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSE---EEEEEEESS-C--CGGGH-HHHHHHHHH--HHG--------GGE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCc---EEEEEecCC-C--chhhH-HHHHHHHHc--CCC--------ccE
Confidence 4667778885 799999999999999999974 22222 331 1 12221 222232221 222 134
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcccc--------C-ceEEECCCC
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM--------H-EALLVNPYE 460 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l--------~-~~llvnP~d 460 (808)
.|.+.++.++..++|+.||+|+.|+.+.| |++++|||+||. |||...-.+.+.-+ + ..++| ..|
T Consensus 502 -~F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGV----PVVTl~G~~~asRvgaSlL~~~GLpE~LI-A~d 574 (631)
T 3q3e_A 502 -TAHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGL----VGVCKTGAEVHEHIDEGLFKRLGLPEWLI-ANT 574 (631)
T ss_dssp -EEECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTC----CEEEECCSSHHHHHHHHHHHHTTCCGGGE-ESS
T ss_pred -EEcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCC----CEEeccCCcHHHHhHHHHHHhcCCCccee-cCC
Confidence 46789999999999999999999998877 999999999953 35543322221111 1 12223 247
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhHH
Q psy2719 461 IDAAANVLHRALCMPRDERELRMSQLRHR 489 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~~~e~~~r~~~~~~~ 489 (808)
.++..++..++.++ ++.+.+..+++++.
T Consensus 575 ~eeYv~~Av~La~D-~~~l~~LR~~Lr~~ 602 (631)
T 3q3e_A 575 VDEYVERAVRLAEN-HQERLELRRYIIEN 602 (631)
T ss_dssp HHHHHHHHHHHHHC-HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCC-HHHHHHHHHHHHHH
Confidence 89999888888875 34444444444443
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.02 E-value=7e-06 Score=81.61 Aligned_cols=68 Identities=9% Similarity=-0.137 Sum_probs=50.6
Q ss_pred CeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccC--CccEEEeCC-CCccccccccccCc
Q psy2719 733 LMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQG--IACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 733 ~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~--~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
..+.++.++ ..+|+.+++.+.+. +|++++ ++++|| |++|++ +|- .+++++|++ .+.++..|+|++++
T Consensus 137 ~~~~~~~~~-~~~~~~~~~~l~~~-~~~~~~---~~~~vGD~~~Di~~~~-~G~~~~~v~~~~~~~~~~~~~~ad~v~~~ 210 (219)
T 3kd3_A 137 GSFKELDNS-NGACDSKLSAFDKA-KGLIDG---EVIAIGDGYTDYQLYE-KGYATKFIAYMEHIEREKVINLSKYVARN 210 (219)
T ss_dssp SBEEEEECT-TSTTTCHHHHHHHH-GGGCCS---EEEEEESSHHHHHHHH-HTSCSEEEEECSSCCCHHHHHHCSEEESS
T ss_pred CceeccCCC-CCCcccHHHHHHHH-hCCCCC---CEEEEECCHhHHHHHh-CCCCcEEEeccCccccHHHHhhcceeeCC
Confidence 345677776 88999999988875 788875 799999 999986 432 233455555 46688999999886
Q ss_pred C
Q psy2719 806 T 806 (808)
Q Consensus 806 ~ 806 (808)
.
T Consensus 211 ~ 211 (219)
T 3kd3_A 211 V 211 (219)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=2.5e-05 Score=86.48 Aligned_cols=158 Identities=15% Similarity=0.102 Sum_probs=98.2
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSP 388 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~ 388 (808)
.+..+++++|++. .|+...+..+++.+. +.+ + .+++++.+.. .. +++++ + . ..
T Consensus 241 ~~~~vlv~~G~~~-~~~~~~~~~~~~~l~-~~~-~----~~~~~~g~~~-~~-------~~l~~----~------~--~~ 293 (412)
T 3otg_A 241 ARPLVYLTLGTSS-GGTVEVLRAAIDGLA-GLD-A----DVLVASGPSL-DV-------SGLGE----V------P--AN 293 (412)
T ss_dssp TSCEEEEECTTTT-CSCHHHHHHHHHHHH-TSS-S----EEEEECCSSC-CC-------TTCCC----C------C--TT
T ss_pred CCCEEEEEcCCCC-cCcHHHHHHHHHHHH-cCC-C----EEEEEECCCC-Ch-------hhhcc----C------C--Cc
Confidence 3456778899996 677776666666554 332 2 2343433221 00 01110 1 0 13
Q ss_pred EEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCC----Ccccc---CceEEECCC--
Q psy2719 389 IRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAG----AGGMM---HEALLVNPY-- 459 (808)
Q Consensus 389 v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G----~~~~l---~~~llvnP~-- 459 (808)
+. +.++++ +..+|+.||++|.+| | ..+++|||+|++ |+|+....+ .++.+ ..|++++|.
T Consensus 294 v~-~~~~~~---~~~~l~~ad~~v~~~---g-~~t~~Ea~a~G~----P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~ 361 (412)
T 3otg_A 294 VR-LESWVP---QAALLPHVDLVVHHG---G-SGTTLGALGAGV----PQLSFPWAGDSFANAQAVAQAGAGDHLLPDNI 361 (412)
T ss_dssp EE-EESCCC---HHHHGGGCSEEEESC---C-HHHHHHHHHHTC----CEEECCCSTTHHHHHHHHHHHTSEEECCGGGC
T ss_pred EE-EeCCCC---HHHHHhcCcEEEECC---c-hHHHHHHHHhCC----CEEecCCchhHHHHHHHHHHcCCEEecCcccC
Confidence 43 457774 678899999999776 2 368999999964 577754433 34444 248999987
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 460 EIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 460 d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
|+++++++|.++|++ ++.+++..+..++....+++..-++.+.+.+
T Consensus 362 ~~~~l~~ai~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 362 SPDSVSGAAKRLLAE-ESYRAGARAVAAEIAAMPGPDEVVRLLPGFA 407 (412)
T ss_dssp CHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHSCCHHHHHTTHHHHH
T ss_pred CHHHHHHHHHHHHhC-HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 999999999999985 3444444444566666677766666555444
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=7.3e-06 Score=87.50 Aligned_cols=42 Identities=12% Similarity=-0.040 Sum_probs=33.5
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEeC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRVD 790 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~ 790 (808)
+-.|+.+++.++++ +|++++ ++++|| |+.|.+.+| .. ++.|.
T Consensus 214 ~KP~~~~~~~~~~~-lgi~~~---e~l~vGD~~~~Di~~a~~aG-~~-~i~v~ 260 (306)
T 2oyc_A 214 GKPSPYMFECITEN-FSIDPA---RTLMVGDRLETDILFGHRCG-MT-TVLTL 260 (306)
T ss_dssp STTSTHHHHHHHHH-SCCCGG---GEEEEESCTTTHHHHHHHHT-CE-EEEES
T ss_pred CCCCHHHHHHHHHH-cCCChH---HEEEECCCchHHHHHHHHCC-Ce-EEEEC
Confidence 66788899999997 899875 799999 888999986 32 35554
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=3.1e-05 Score=85.57 Aligned_cols=98 Identities=6% Similarity=-0.053 Sum_probs=60.0
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCC----CCCcccc---CceEEECCC--CH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPF----AGAGGMM---HEALLVNPY--EI 461 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~----~G~~~~l---~~~llvnP~--d~ 461 (808)
.+.++++. ..++..||++|. .|-+.+++|||+|++ |+|+.-. .+.++.+ +.|+++++. |.
T Consensus 287 ~~~~~~~~---~~ll~~ad~~v~----~gG~~t~~Ea~~~G~----P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 355 (398)
T 4fzr_A 287 LAAGQFPL---SAIMPACDVVVH----HGGHGTTLTCLSEGV----PQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGV 355 (398)
T ss_dssp EEESCCCH---HHHGGGCSEEEE----CCCHHHHHHHHHTTC----CEEECCCSGGGHHHHHHHHHTTSEEECC------
T ss_pred EEeCcCCH---HHHHhhCCEEEe----cCCHHHHHHHHHhCC----CEEecCCchhHHHHHHHHHHcCCEEecCcccCCH
Confidence 45577764 556888999995 455788999999965 4666333 2334444 248999887 78
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHH
Q psy2719 462 DAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMN 500 (808)
Q Consensus 462 ~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~ 500 (808)
++++++|.++|+.+. .+.+..+..++.....++..-++
T Consensus 356 ~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 356 ESVLAACARIRDDSS-YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp -CHHHHHHHHHHCTH-HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred HHHHHHHHHHHhCHH-HHHHHHHHHHHHHcCCCHHHHHH
Confidence 899999999998643 33333333444445555554443
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=3.7e-05 Score=84.59 Aligned_cols=154 Identities=9% Similarity=0.044 Sum_probs=96.1
Q ss_pred CCeEEEEEcCccccCCh-HHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy2719 310 NLKVILGVDRLDYTKGL-VHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSP 388 (808)
Q Consensus 310 ~~~iil~V~Rl~~~KGi-~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~ 388 (808)
...+++++|++...|+. ..+++++.+. ++.|+++ +++++.+. +.+.+ . .+ . .+
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~~~-----~~~~l----~----~~------~--~~ 271 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVPPE-----HRALL----T----DL------P--DN 271 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECCGG-----GGGGC----T----TC------C--TT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEECCc-----chhhc----c----cC------C--CC
Confidence 34677778999886666 8888888888 7777653 55444321 11111 1 00 0 13
Q ss_pred EEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCC----CCCcccc---CceEEECC---
Q psy2719 389 IRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPF----AGAGGMM---HEALLVNP--- 458 (808)
Q Consensus 389 v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~----~G~~~~l---~~~llvnP--- 458 (808)
+ .+.++++..+ +++.||++|.. |-..+.+|||+|++ |+|+.-. .+.++.+ +.|++++|
T Consensus 272 v-~~~~~~~~~~---ll~~ad~~v~~----~G~~t~~Ea~~~G~----P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 339 (391)
T 3tsa_A 272 A-RIAESVPLNL---FLRTCELVICA----GGSGTAFTATRLGI----PQLVLPQYFDQFDYARNLAAAGAGICLPDEQA 339 (391)
T ss_dssp E-EECCSCCGGG---TGGGCSEEEEC----CCHHHHHHHHHTTC----CEEECCCSTTHHHHHHHHHHTTSEEECCSHHH
T ss_pred E-EEeccCCHHH---HHhhCCEEEeC----CCHHHHHHHHHhCC----CEEecCCcccHHHHHHHHHHcCCEEecCcccc
Confidence 3 4567777654 45999999954 45578899999965 4666333 2223333 24899998
Q ss_pred -CCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHH
Q psy2719 459 -YEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSF 502 (808)
Q Consensus 459 -~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~ 502 (808)
.|+++++++|.++|+.+. .+.+..+..++......+..-++.+
T Consensus 340 ~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i 383 (391)
T 3tsa_A 340 QSDHEQFTDSIATVLGDTG-FAAAAIKLSDEITAMPHPAALVRTL 383 (391)
T ss_dssp HTCHHHHHHHHHHHHTCTH-HHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 899999999999998653 3333333344444555665555433
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.94 E-value=7.7e-06 Score=75.49 Aligned_cols=37 Identities=24% Similarity=0.296 Sum_probs=27.4
Q ss_pred eEEEEecccccccCCCCC-CccCCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTSHP-DLAVMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~-~~~~i~~~~~~~L~~L~~~ 580 (808)
++|+||+||||++....+ ....+++.+.++|++|.++
T Consensus 2 k~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~ 39 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQL 39 (126)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHT
T ss_pred CEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhC
Confidence 589999999999843210 0114678999999999887
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.85 E-value=1.9e-05 Score=82.00 Aligned_cols=56 Identities=13% Similarity=0.099 Sum_probs=38.5
Q ss_pred CCHH--HHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEeC--C--CCcccc---ccccccCc
Q psy2719 744 WDQG--RASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRVD--S--SPTVKS---SWKQGSNH 805 (808)
Q Consensus 744 v~KG--~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~--~--~~~vk~---~A~~~~~~ 805 (808)
..|. .+.+.++++ +|++++ ++++|| |+.|.+.+| .. ++.|. . .+++++ .|+|++++
T Consensus 181 ~~KP~p~~~~~~~~~-~~~~~~---~~~~vGD~~~~Di~~a~~aG-~~-~i~v~~g~~~~~~l~~~~~~~d~v~~~ 250 (264)
T 1yv9_A 181 IGKPKAIIMERAIAH-LGVEKE---QVIMVGDNYETDIQSGIQNG-ID-SLLVTSGFTPKSAVPTLPTPPTYVVDS 250 (264)
T ss_dssp CSTTSHHHHHHHHHH-HCSCGG---GEEEEESCTTTHHHHHHHHT-CE-EEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred cCCCCHHHHHHHHHH-cCCCHH---HEEEECCCcHHHHHHHHHcC-Cc-EEEECCCCCCHHHHHhcCCCCCEEEec
Confidence 4565 488888886 899875 799999 777788775 22 34454 2 235554 58888765
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.82 E-value=1.9e-06 Score=87.16 Aligned_cols=60 Identities=12% Similarity=-0.007 Sum_probs=46.7
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+-.|+.+++.++++ +|++++ ++++|| |++|.+.+|-..+.|++++ .++++..|+|++++.
T Consensus 154 ~kp~~~~~~~~~~~-~~~~~~---~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~ 219 (234)
T 3u26_A 154 FKPHPRIFELALKK-AGVKGE---EAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDL 219 (234)
T ss_dssp CTTSHHHHHHHHHH-HTCCGG---GEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESST
T ss_pred CCcCHHHHHHHHHH-cCCCch---hEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCH
Confidence 44678889999997 899875 799999 8899999963334566665 567888999998863
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.76 E-value=1.4e-06 Score=87.92 Aligned_cols=56 Identities=5% Similarity=-0.095 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEe---CC-CCccccccccccCcC
Q psy2719 744 WDQGRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRV---DS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav---~~-~~~vk~~A~~~~~~~ 806 (808)
-.|..+++.++++ +|++++ ++++|| |++|++.+| +.++| ++ .++++..|++++++.
T Consensus 158 kp~~~~~~~~~~~-lgi~~~---~~~~iGD~~~nDi~~a~~aG---~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (235)
T 2om6_A 158 KPRKEMFEKVLNS-FEVKPE---ESLHIGDTYAEDYQGARKVG---MWAVWINQEGDKVRKLEERGFEIPSI 222 (235)
T ss_dssp TTCHHHHHHHHHH-TTCCGG---GEEEEESCTTTTHHHHHHTT---SEEEEECTTCCSCEEEETTEEEESSG
T ss_pred CCCHHHHHHHHHH-cCCCcc---ceEEECCChHHHHHHHHHCC---CEEEEECCCCCCcccCCCCcchHhhH
Confidence 3578899999997 899875 799999 888999884 44666 43 356677788887753
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.70 E-value=6.5e-06 Score=86.29 Aligned_cols=59 Identities=8% Similarity=-0.091 Sum_probs=43.3
Q ss_pred CCCHHHHHHHHHHHhcCC-------CCCcceeEEEEe----CHHHHHhccCCc-cEEEeCC-CCcccc-ccccccCcC
Q psy2719 743 KWDQGRASIHILRTMYGV-------DWSERVRIIYAG----NEDAMLALQGIA-CTFRVDS-SPTVKS-SWKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i-------~~~~~~~via~G----D~~Mf~~~~~~~-~~vav~~-~~~vk~-~A~~~~~~~ 806 (808)
+..|+.+++.++++ +|+ +++ ++++|| |++|++.+| .+ +.|++++ .++++. .|+|++++.
T Consensus 169 ~kp~~~~~~~~~~~-lgi~~~~~~~~~~---~~i~~GDs~nDi~~a~~AG-~~~i~v~~~~~~~~~~~~~ad~v~~~~ 241 (275)
T 2qlt_A 169 GKPHPEPYLKGRNG-LGFPINEQDPSKS---KVVVFEDAPAGIAAGKAAG-CKIVGIATTFDLDFLKEKGCDIIVKNH 241 (275)
T ss_dssp CTTSSHHHHHHHHH-TTCCCCSSCGGGS---CEEEEESSHHHHHHHHHTT-CEEEEESSSSCHHHHTTSSCSEEESSG
T ss_pred CCCChHHHHHHHHH-cCCCccccCCCcc---eEEEEeCCHHHHHHHHHcC-CEEEEECCCCCHHHHhhCCCCEEECCh
Confidence 67889999999997 899 765 799999 999999996 32 2222343 344444 699998764
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=97.68 E-value=1.2e-05 Score=81.63 Aligned_cols=62 Identities=10% Similarity=0.037 Sum_probs=48.8
Q ss_pred eCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-C-Ccccc-ccccccCc
Q psy2719 739 KPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-S-PTVKS-SWKQGSNH 805 (808)
Q Consensus 739 ~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~-~~vk~-~A~~~~~~ 805 (808)
.+. +..|+.+++.++++ +|++++ ++++|| |++|++.+|-..+.|++++ . +++++ .|+|++++
T Consensus 156 ~~~-~kp~~~~~~~~~~~-lg~~~~---~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~ 224 (237)
T 4ex6_A 156 VER-GKPHPDMALHVARG-LGIPPE---RCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDS 224 (237)
T ss_dssp SSS-CTTSSHHHHHHHHH-HTCCGG---GEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESS
T ss_pred CCC-CCCCHHHHHHHHHH-cCCCHH---HeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECC
Confidence 444 67899999999997 899875 799999 9999999973344577774 3 56665 89999876
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.67 E-value=4.4e-06 Score=86.63 Aligned_cols=49 Identities=12% Similarity=-0.035 Sum_probs=38.3
Q ss_pred EeCCCCCCHHHHHHHHHHHhcCCCC-CcceeEEEEe----CHHHHHhccCCccEEEeCC
Q psy2719 738 AKPPVKWDQGRASIHILRTMYGVDW-SERVRIIYAG----NEDAMLALQGIACTFRVDS 791 (808)
Q Consensus 738 v~p~~~v~KG~av~~ll~~~~~i~~-~~~~~via~G----D~~Mf~~~~~~~~~vav~~ 791 (808)
..+. +.+|+.+++.++++ +|+++ + ++++|| |++|++.+|-..+.|++++
T Consensus 155 ~~~~-~kp~~~~~~~~~~~-lgi~~~~---~~i~iGD~~nDi~~a~~aG~~~i~v~~~~ 208 (267)
T 1swv_A 155 DVPA-GRPYPWMCYKNAME-LGVYPMN---HMIKVGDTVSDMKEGRNAGMWTVGVILGS 208 (267)
T ss_dssp GSSC-CTTSSHHHHHHHHH-HTCCSGG---GEEEEESSHHHHHHHHHTTSEEEEECTTC
T ss_pred ccCC-CCCCHHHHHHHHHH-hCCCCCc---CEEEEeCCHHHHHHHHHCCCEEEEEcCCC
Confidence 3455 78999999999997 89986 5 799999 9999999963234455654
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00016 Score=80.53 Aligned_cols=103 Identities=13% Similarity=0.011 Sum_probs=68.2
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCC----Ccccc---CceEEECCC--CH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAG----AGGMM---HEALLVNPY--EI 461 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G----~~~~l---~~~llvnP~--d~ 461 (808)
.+.+++++. .+|+.||++|..| |. .+.+|||+|++ |+|+....| .++.+ +.|+++++. |+
T Consensus 286 ~~~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~G~----P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 354 (430)
T 2iyf_A 286 EVHDWVPQL---AILRQADLFVTHA---GA-GGSQEGLATAT----PMIAVPQAVDQFGNADMLQGLGVARKLATEEATA 354 (430)
T ss_dssp EEESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHTTC----CEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCH
T ss_pred EEEecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHhCC----CEEECCCccchHHHHHHHHHcCCEEEcCCCCCCH
Confidence 356888865 6799999999865 43 68999999964 577776644 12223 348999887 88
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHH
Q psy2719 462 DAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSS 505 (808)
Q Consensus 462 ~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 505 (808)
++++++|.++|+. ++.+++..+..++.....++...++.+.+.
T Consensus 355 ~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 397 (430)
T 2iyf_A 355 DLLRETALALVDD-PEVARRLRRIQAEMAQEGGTRRAADLIEAE 397 (430)
T ss_dssp HHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC-HHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 9999999999974 333333333334444445555555544433
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00011 Score=76.49 Aligned_cols=49 Identities=6% Similarity=0.085 Sum_probs=41.0
Q ss_pred CCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccC
Q psy2719 744 WDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSN 804 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~ 804 (808)
.+|+.+++.+.+. + ++++|| |++|++.+| ++|+|++ .+++++.|++++.
T Consensus 193 ~~k~~~~k~~~~~-~--------~~~~vGD~~nDi~~~~~Ag---~~va~~~~~~~~~~~a~~~~~ 246 (280)
T 3skx_A 193 HEKAEKVKEVQQK-Y--------VTAMVGDGVNDAPALAQAD---VGIAIGAGTDVAVETADIVLV 246 (280)
T ss_dssp GGHHHHHHHHHTT-S--------CEEEEECTTTTHHHHHHSS---EEEECSCCSSSCCCSSSEECS
T ss_pred HHHHHHHHHHHhc-C--------CEEEEeCCchhHHHHHhCC---ceEEecCCcHHHHhhCCEEEe
Confidence 4899999888764 3 589999 999999995 5699997 6889999999884
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00015 Score=74.58 Aligned_cols=42 Identities=12% Similarity=0.078 Sum_probs=33.7
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEeC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRVD 790 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~ 790 (808)
+-.|+.+++.++++ +|++++ ++++|| |+.|.+.+| . -++.|.
T Consensus 178 ~Kp~~~~~~~~~~~-lgi~~~---~~~~iGD~~~~Di~~a~~aG-~-~~i~v~ 224 (259)
T 2ho4_A 178 GKPEKTFFLEALRD-ADCAPE---EAVMIGDDCRDDVDGAQNIG-M-LGILVK 224 (259)
T ss_dssp STTSHHHHHHHGGG-GTCCGG---GEEEEESCTTTTHHHHHHTT-C-EEEEES
T ss_pred cCCCHHHHHHHHHH-cCCChH---HEEEECCCcHHHHHHHHHCC-C-cEEEEC
Confidence 45789999999986 899875 799999 899999996 2 246665
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.57 E-value=1.2e-05 Score=81.16 Aligned_cols=58 Identities=12% Similarity=-0.032 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHHhcC--CCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CC-cccc-ccccccCcC
Q psy2719 745 DQGRASIHILRTMYG--VDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SP-TVKS-SWKQGSNHT 806 (808)
Q Consensus 745 ~KG~av~~ll~~~~~--i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~-~vk~-~A~~~~~~~ 806 (808)
.+..+++.++++ +| ++++ ++++|| |++|.+.+|-..+.|++++ .. +++. .|+|++++.
T Consensus 152 ~~~~~~~~~~~~-lg~~~~~~---~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~ 218 (234)
T 2hcf_A 152 LPHIALERARRM-TGANYSPS---QIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNF 218 (234)
T ss_dssp HHHHHHHHHHHH-HCCCCCGG---GEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCS
T ss_pred hHHHHHHHHHHH-hCCCCCcc---cEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCH
Confidence 346678888886 88 7865 799999 9999999962223344443 22 2322 388888764
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00047 Score=75.46 Aligned_cols=145 Identities=14% Similarity=0.105 Sum_probs=81.1
Q ss_pred CeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy2719 311 LKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIR 390 (808)
Q Consensus 311 ~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~ 390 (808)
..+++..|++...+.-..+++|++.+..+ . ++.++.+++. + .++.+++. ....+. ++.
T Consensus 181 ~~ilv~gGs~g~~~~~~~~~~al~~l~~~----~-~~~vi~~~G~--~---~~~~~~~~----~~~~~~--------~~~ 238 (365)
T 3s2u_A 181 VNLLVLGGSLGAEPLNKLLPEALAQVPLE----I-RPAIRHQAGR--Q---HAEITAER----YRTVAV--------EAD 238 (365)
T ss_dssp CEEEECCTTTTCSHHHHHHHHHHHTSCTT----T-CCEEEEECCT--T---THHHHHHH----HHHTTC--------CCE
T ss_pred cEEEEECCcCCccccchhhHHHHHhcccc----c-ceEEEEecCc--c---ccccccce----eccccc--------ccc
Confidence 34555567776666555666666554222 1 2233333321 1 22233332 223221 122
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCcc--------cc---CceEEECCC
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGG--------MM---HEALLVNPY 459 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~--------~l---~~~llvnP~ 459 (808)
+ .+++ +++..+|+.||++|..| | +.++.|+|+++. |.|+....++.+ .+ +.|++++..
T Consensus 239 v-~~f~--~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G~----P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~ 307 (365)
T 3s2u_A 239 V-APFI--SDMAAAYAWADLVICRA---G-ALTVSELTAAGL----PAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQK 307 (365)
T ss_dssp E-ESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHHTC----CEEECC-----CCHHHHHHHHHHTTTSEEECCTT
T ss_pred c-ccch--hhhhhhhccceEEEecC---C-cchHHHHHHhCC----CeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecC
Confidence 2 3554 46889999999998644 5 688899999975 466655544321 23 247888765
Q ss_pred --CHHHHHHHHHHHhCCCHHHHHHHHHHHhHH
Q psy2719 460 --EIDAAANVLHRALCMPRDERELRMSQLRHR 489 (808)
Q Consensus 460 --d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~ 489 (808)
+++.++++|.++|+++ +.++++.+++++.
T Consensus 308 ~~~~~~L~~~i~~ll~d~-~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 308 STGAAELAAQLSEVLMHP-ETLRSMADQARSL 338 (365)
T ss_dssp TCCHHHHHHHHHHHHHCT-HHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHCCH-HHHHHHHHHHHhc
Confidence 4889999999999865 3344444444443
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00017 Score=69.53 Aligned_cols=122 Identities=15% Similarity=0.082 Sum_probs=80.5
Q ss_pred CCeEEEEEcCcc---ccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCC
Q psy2719 310 NLKVILGVDRLD---YTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNW 386 (808)
Q Consensus 310 ~~~iil~V~Rl~---~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~ 386 (808)
...+++++|++. +.|++..+++|+++ .+ . .++.++.+... + .+ +
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~----~~-~----~~~~~~g~~~~---~-------------~~----~---- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQ----IP-Q----KVLWRFDGNKP---D-------------TL----G---- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTT----SS-S----EEEEECCSSCC---T-------------TC----C----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHh----CC-C----eEEEEECCcCc---c-------------cC----C----
Confidence 357889999995 67788888888753 22 2 23434322210 0 01 0
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCC----Ccccc---CceEEECCC
Q psy2719 387 SPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAG----AGGMM---HEALLVNPY 459 (808)
Q Consensus 387 ~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G----~~~~l---~~~llvnP~ 459 (808)
..+ .+.+++++.++.++ +.||++|.. |-+.++.|||+|++ |+|+....+ .++.+ +.|+++++.
T Consensus 68 ~~v-~~~~~~~~~~~l~~-~~ad~~I~~----~G~~t~~Ea~~~G~----P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~ 137 (170)
T 2o6l_A 68 LNT-RLYKWIPQNDLLGH-PKTRAFITH----GGANGIYEAIYHGI----PMVGIPLFADQPDNIAHMKARGAAVRVDFN 137 (170)
T ss_dssp TTE-EEESSCCHHHHHTS-TTEEEEEEC----CCHHHHHHHHHHTC----CEEECCCSTTHHHHHHHHHTTTSEEECCTT
T ss_pred CcE-EEecCCCHHHHhcC-CCcCEEEEc----CCccHHHHHHHcCC----CEEeccchhhHHHHHHHHHHcCCeEEeccc
Confidence 134 45688998776553 999999974 33589999999965 477666532 12223 248889887
Q ss_pred --CHHHHHHHHHHHhCC
Q psy2719 460 --EIDAAANVLHRALCM 474 (808)
Q Consensus 460 --d~~~lA~ai~~~L~~ 474 (808)
+.++++++|.++|+.
T Consensus 138 ~~~~~~l~~~i~~ll~~ 154 (170)
T 2o6l_A 138 TMSSTDLLNALKRVIND 154 (170)
T ss_dssp TCCHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHcC
Confidence 889999999999974
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.39 E-value=3.9e-05 Score=76.88 Aligned_cols=55 Identities=9% Similarity=0.119 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEe------CC-CCcccccc-ccccCc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRV------DS-SPTVKSSW-KQGSNH 805 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav------~~-~~~vk~~A-~~~~~~ 805 (808)
.|+.+++.++++ +|++++ ++++|| |++|.+.+| .+ ++.| ++ .++.+..+ +|++++
T Consensus 158 pk~~~~~~~~~~-lgi~~~---~~i~iGD~~~~Di~~a~~aG-~~-~v~v~~~~~~g~~~~~~~~~~~d~v~~~ 225 (234)
T 3ddh_A 158 KTEKEYLRLLSI-LQIAPS---ELLMVGNSFKSDIQPVLSLG-GY-GVHIPFEVMWKHEVTETFAHERLKQVKR 225 (234)
T ss_dssp CSHHHHHHHHHH-HTCCGG---GEEEEESCCCCCCHHHHHHT-CE-EEECCCCTTCCCC---CCCCTTEEECSS
T ss_pred CCHHHHHHHHHH-hCCCcc---eEEEECCCcHHHhHHHHHCC-Ce-EEEecCCcccccCCcccccCCCceeccc
Confidence 699999999997 899875 899999 889999996 33 2333 33 23334444 888765
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00018 Score=72.49 Aligned_cols=46 Identities=9% Similarity=0.156 Sum_probs=35.0
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSP 793 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~ 793 (808)
+-.|..+++.++++ +|+++++ ++++|| |++|.+.+| . .++.|++..
T Consensus 158 ~Kp~~~~~~~~~~~-lgi~~~~--~~v~vGD~~~Di~~a~~aG-~-~~v~~~~~~ 207 (231)
T 3kzx_A 158 IKPSPEPVLAALTN-INIEPSK--EVFFIGDSISDIQSAIEAG-C-LPIKYGSTN 207 (231)
T ss_dssp CTTSSHHHHHHHHH-HTCCCST--TEEEEESSHHHHHHHHHTT-C-EEEEECC--
T ss_pred CCCChHHHHHHHHH-cCCCccc--CEEEEcCCHHHHHHHHHCC-C-eEEEECCCC
Confidence 55678899999997 8998641 599999 999999996 2 258888643
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0024 Score=69.82 Aligned_cols=136 Identities=10% Similarity=0.061 Sum_probs=84.4
Q ss_pred CeEEEEEcCcccc-------CChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCC
Q psy2719 311 LKVILGVDRLDYT-------KGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSK 383 (808)
Q Consensus 311 ~~iil~V~Rl~~~-------KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~ 383 (808)
..+++++|++... +.+..+++|++.+ ++ .++.++. .++. ++++. +..
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~----~~~~~~g-----~~~~----~~l~~----~~~---- 264 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DV----ELIVAAP-----DTVA----EALRA----EVP---- 264 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TC----EEEEECC-----HHHH----HHHHH----HCT----
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----Cc----EEEEEeC-----CCCH----HhhCC----CCC----
Confidence 5688999999875 5677778887542 22 2443331 1221 22221 211
Q ss_pred CCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCC----Ccccc---CceEEE
Q psy2719 384 PNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAG----AGGMM---HEALLV 456 (808)
Q Consensus 384 ~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G----~~~~l---~~~llv 456 (808)
.+ .+ ++++.. .+|+.||+||..+ | ..+++|||+|++ |+|+....+ .++.+ +.|+++
T Consensus 265 ----~v-~~-~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G~----P~v~~p~~~dq~~~a~~~~~~g~g~~~ 327 (384)
T 2p6p_A 265 ----QA-RV-GWTPLD---VVAPTCDLLVHHA---G-GVSTLTGLSAGV----PQLLIPKGSVLEAPARRVADYGAAIAL 327 (384)
T ss_dssp ----TS-EE-ECCCHH---HHGGGCSEEEECS---C-TTHHHHHHHTTC----CEEECCCSHHHHHHHHHHHHHTSEEEC
T ss_pred ----ce-EE-cCCCHH---HHHhhCCEEEeCC---c-HHHHHHHHHhCC----CEEEccCcccchHHHHHHHHCCCeEec
Confidence 23 34 777765 4679999999863 3 468999999964 577766532 23333 248888
Q ss_pred CCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHh
Q psy2719 457 NPY--EIDAAANVLHRALCMPRDERELRMSQLRHREQ 491 (808)
Q Consensus 457 nP~--d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~ 491 (808)
++. +.++++++|.++|+. + +.++++....+.+.
T Consensus 328 ~~~~~~~~~l~~~i~~ll~~-~-~~~~~~~~~~~~~~ 362 (384)
T 2p6p_A 328 LPGEDSTEAIADSCQELQAK-D-TYARRAQDLSREIS 362 (384)
T ss_dssp CTTCCCHHHHHHHHHHHHHC-H-HHHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHHcC-H-HHHHHHHHHHHHHH
Confidence 875 789999999999974 3 34444554444443
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00025 Score=76.57 Aligned_cols=55 Identities=13% Similarity=0.175 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccCc
Q psy2719 744 WDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNH 805 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~ 805 (808)
-.|+.+++.++++ +|++++ ++++|| |++|++.+| ++++|.+.+.+|+.|++++.+
T Consensus 244 kpk~~~~~~~~~~-lgi~~~---~~v~vGDs~nDi~~a~~aG---~~va~~~~~~~~~~a~~v~~~ 302 (335)
T 3n28_A 244 QTKADILLTLAQQ-YDVEIH---NTVAVGDGANDLVMMAAAG---LGVAYHAKPKVEAKAQTAVRF 302 (335)
T ss_dssp HHHHHHHHHHHHH-HTCCGG---GEEEEECSGGGHHHHHHSS---EEEEESCCHHHHTTSSEEESS
T ss_pred hhhHHHHHHHHHH-cCCChh---hEEEEeCCHHHHHHHHHCC---CeEEeCCCHHHHhhCCEEEec
Confidence 4799999999997 899875 799999 999999995 458885578899999998864
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.20 E-value=2.6e-05 Score=79.30 Aligned_cols=65 Identities=9% Similarity=-0.004 Sum_probs=48.1
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCC-CCcceeEEEEe----CHHHHHhccCCccEEEeCC-C-Ccc-ccccccccCcC
Q psy2719 737 EAKPPVKWDQGRASIHILRTMYGVD-WSERVRIIYAG----NEDAMLALQGIACTFRVDS-S-PTV-KSSWKQGSNHT 806 (808)
Q Consensus 737 Ev~p~~~v~KG~av~~ll~~~~~i~-~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~-~~v-k~~A~~~~~~~ 806 (808)
|..+. +..|+.+++.++++ +|++ ++ ++++|| |++|.+.+|-..+.|++++ . +++ +..|++++++.
T Consensus 160 ~~~~~-~kp~~~~~~~~~~~-~g~~~~~---~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~ 232 (240)
T 3sd7_A 160 NLDGT-RVNKNEVIQYVLDL-CNVKDKD---KVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENV 232 (240)
T ss_dssp CTTSC-CCCHHHHHHHHHHH-HTCCCGG---GEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSS
T ss_pred cccCC-CCCCHHHHHHHHHH-cCCCCCC---cEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCH
Confidence 44454 67899999999997 8998 75 799999 9999999963333455553 3 222 57899998864
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00014 Score=76.02 Aligned_cols=58 Identities=7% Similarity=0.004 Sum_probs=42.3
Q ss_pred CCCHHHHHHHHHHHhcCCCC-CcceeEEEEe----CHHHHHhccCCccEEEeCCCC-----ccccccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDW-SERVRIIYAG----NEDAMLALQGIACTFRVDSSP-----TVKSSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~-~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~-----~vk~~A~~~~~~ 805 (808)
+-.|+.+++.++++ +|+++ + ++++|| |+.|.+.+| .+.++.++... ..+..|+|++++
T Consensus 203 ~Kp~~~~~~~~~~~-lgi~~~~---~~i~vGD~~~Di~~a~~aG-~~~~~~~~~~~~~~~~~~~~~ad~vi~s 270 (282)
T 3nuq_A 203 CKPHVKAFEKAMKE-SGLARYE---NAYFIDDSGKNIETGIKLG-MKTCIHLVENEVNEILGQTPEGAIVISD 270 (282)
T ss_dssp CTTSHHHHHHHHHH-HTCCCGG---GEEEEESCHHHHHHHHHHT-CSEEEEECSCCC----CCCCTTCEEESS
T ss_pred CCcCHHHHHHHHHH-cCCCCcc---cEEEEcCCHHHHHHHHHCC-CeEEEEEcCCccccccccCCCCCEEeCC
Confidence 46899999999997 89986 5 799999 999999995 55334444221 124477888765
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00055 Score=80.65 Aligned_cols=54 Identities=15% Similarity=0.139 Sum_probs=43.5
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 737 EAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 737 Ev~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
++.|. +|+.+++.+.++ . .++++| |.+|++.++ ++|+|++ .+.+|+.||+++.+
T Consensus 502 ~~~P~---~K~~~v~~l~~~----~-----~v~~vGDg~ND~~al~~A~---vgiamg~g~~~a~~~AD~vl~~ 560 (645)
T 3j08_A 502 EVLPH---QKSEEVKKLQAK----E-----VVAFVGDGINDAPALAQAD---LGIAVGSGSDVAVESGDIVLIR 560 (645)
T ss_dssp SCCTT---CHHHHHHHHTTT----C-----CEEEEECSSSCHHHHHHSS---EEEEECCCSCCSSCCSSSEESS
T ss_pred eCCHH---hHHHHHHHHhhC----C-----eEEEEeCCHhHHHHHHhCC---EEEEeCCCcHHHHHhCCEEEec
Confidence 44554 999999987542 1 699999 999999995 4599996 68899999999864
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.11 E-value=6.1e-05 Score=75.73 Aligned_cols=57 Identities=11% Similarity=-0.003 Sum_probs=41.2
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEeC---CCCccccccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRVD---SSPTVKSSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~---~~~~vk~~A~~~~~~ 805 (808)
+-.|+.+++.++++ +|++++ ++++|| |+.|.+.+| .. ++.+. +..+.+..|++++.+
T Consensus 154 ~kp~~~~~~~~~~~-~~~~~~---~~~~vGD~~~~Di~~a~~aG-~~-~~~v~~~~~~~~~~~~~~~~~~~ 218 (230)
T 3vay_A 154 GKPDPAPFLEALRR-AKVDAS---AAVHVGDHPSDDIAGAQQAG-MR-AIWYNPQGKAWDADRLPDAEIHN 218 (230)
T ss_dssp CTTSHHHHHHHHHH-HTCCGG---GEEEEESCTTTTHHHHHHTT-CE-EEEECTTCCCCCSSSCCSEEESS
T ss_pred CCcCHHHHHHHHHH-hCCCch---heEEEeCChHHHHHHHHHCC-CE-EEEEcCCCCCCcccCCCCeeECC
Confidence 45678999999997 899875 799999 888999885 33 34443 222226778888765
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00062 Score=68.47 Aligned_cols=57 Identities=11% Similarity=0.083 Sum_probs=41.8
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeC---C-CCccccccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVD---S-SPTVKSSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~---~-~~~vk~~A~~~~~~ 805 (808)
+-.|..+++.++++ +|++++ ++++|| |+.|.+.+| .. ++.+. + .+.++..|+|++++
T Consensus 150 ~Kp~~~~~~~~~~~-~~~~~~---~~~~iGD~~~Di~~a~~aG-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
T 1zrn_A 150 YKPDNRVYELAEQA-LGLDRS---AILFVASNAWDATGARYFG-FP-TCWINRTGNVFEEMGQTPDWEVTS 214 (232)
T ss_dssp CTTSHHHHHHHHHH-HTSCGG---GEEEEESCHHHHHHHHHHT-CC-EEEECTTCCCCCSSSCCCSEEESS
T ss_pred CCCCHHHHHHHHHH-cCCCcc---cEEEEeCCHHHHHHHHHcC-CE-EEEEcCCCCCccccCCCCCEEECC
Confidence 45677899999987 898875 799999 899999985 33 23333 2 25567788888765
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00085 Score=80.10 Aligned_cols=54 Identities=15% Similarity=0.139 Sum_probs=43.5
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 737 EAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 737 Ev~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
++.|. +|+.+++.+.++ . .++++| |.+|++.++ ++++|++ .+.+|+.||+++.+
T Consensus 580 ~~~P~---~K~~~v~~l~~~----~-----~v~~vGDg~ND~~al~~A~---vgiamg~g~~~a~~~AD~vl~~ 638 (723)
T 3j09_A 580 EVLPH---QKSEEVKKLQAK----E-----VVAFVGDGINDAPALAQAD---LGIAVGSGSDVAVESGDIVLIR 638 (723)
T ss_dssp SCCTT---CHHHHHHHHTTT----C-----CEEEEECSSTTHHHHHHSS---EEEECCCCSCCSSCCSSEECSS
T ss_pred cCCHH---HHHHHHHHHhcC----C-----eEEEEECChhhHHHHhhCC---EEEEeCCCcHHHHHhCCEEEeC
Confidence 44554 899999987542 1 699999 999999995 4599996 68899999999964
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0049 Score=61.86 Aligned_cols=51 Identities=12% Similarity=0.125 Sum_probs=38.7
Q ss_pred CCCHHHHHHHHHHHhcC---CCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccc
Q psy2719 743 KWDQGRASIHILRTMYG---VDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWK 800 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~---i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~ 800 (808)
+..|..+++.++++ +| ++++ ++++|| |++|++.++ .+++|...+.+++.|+
T Consensus 157 ~~~K~~~~~~~~~~-~~~~~~~~~---~~~~vGDs~~D~~~~~~ag---~~~~~~~~~~l~~~a~ 214 (232)
T 3fvv_A 157 REGKVVRVNQWLAG-MGLALGDFA---ESYFYSDSVNDVPLLEAVT---RPIAANPSPGLREIAQ 214 (232)
T ss_dssp THHHHHHHHHHHHH-TTCCGGGSS---EEEEEECCGGGHHHHHHSS---EEEEESCCHHHHHHHH
T ss_pred chHHHHHHHHHHHH-cCCCcCchh---heEEEeCCHhhHHHHHhCC---CeEEECcCHHHHHHHH
Confidence 34677888888886 78 7765 799999 999999994 4588865666666554
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00062 Score=68.99 Aligned_cols=59 Identities=10% Similarity=0.014 Sum_probs=41.5
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCcccccc-ccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSW-KQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A-~~~~~~ 805 (808)
+-.|..+++.++++ +|++++ ++++|| |+.|.+.+|-..+.|..++ .+.++..| ++++++
T Consensus 160 ~Kp~~~~~~~~~~~-~~~~~~---~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~ 224 (240)
T 2no4_A 160 YKPDPRIYQFACDR-LGVNPN---EVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNS 224 (240)
T ss_dssp CTTSHHHHHHHHHH-HTCCGG---GEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESS
T ss_pred CCCCHHHHHHHHHH-cCCCcc---cEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCC
Confidence 45678899999987 899875 799999 8999999962222233333 34455667 888765
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00032 Score=72.97 Aligned_cols=17 Identities=29% Similarity=0.352 Sum_probs=14.7
Q ss_pred CCceEEEEecccccccC
Q psy2719 541 NCKLSLILDYDGTLTPL 557 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~ 557 (808)
.+.++|+||+||||++.
T Consensus 57 ~~~kavifDlDGTLld~ 73 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDN 73 (258)
T ss_dssp SSEEEEEECSBTTTEEC
T ss_pred CCCCEEEEeCcccCcCC
Confidence 45689999999999984
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=96.97 E-value=8.7e-05 Score=75.37 Aligned_cols=57 Identities=12% Similarity=-0.017 Sum_probs=43.3
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCC-Ccc----ccccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSS-PTV----KSSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~-~~v----k~~A~~~~~~ 805 (808)
+..|+.+++.++++ +|++++ ++++|| |++|.+.+| .. ++.|.+. ... +..|+|++++
T Consensus 164 ~kp~~~~~~~~~~~-lg~~~~---~~i~vGD~~~Di~~a~~aG-~~-~i~v~~~~~~~~~l~~~~ad~v~~~ 229 (247)
T 3dv9_A 164 GKPNPEPYLMALKK-GGFKPN---EALVIENAPLGVQAGVAAG-IF-TIAVNTGPLHDNVLLNEGANLLFHS 229 (247)
T ss_dssp CTTSSHHHHHHHHH-HTCCGG---GEEEEECSHHHHHHHHHTT-SE-EEEECCSSSCHHHHHTTTCSEEESS
T ss_pred CCCCCHHHHHHHHH-cCCChh---heEEEeCCHHHHHHHHHCC-Ce-EEEEcCCCCCHHHHHhcCCCEEECC
Confidence 67889999999997 899875 799999 999999996 32 4666642 222 2378998876
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=96.96 E-value=7e-05 Score=76.33 Aligned_cols=57 Identities=11% Similarity=-0.032 Sum_probs=43.3
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCC-Cccc----cccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSS-PTVK----SSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~-~~vk----~~A~~~~~~ 805 (808)
+-.|+.+++.++++ +|++++ ++++|| |++|.+.+| .. ++.|.+. ...+ ..|+|++++
T Consensus 165 ~kp~~~~~~~~~~~-lg~~~~---~~i~vGD~~~Di~~a~~aG-~~-~i~v~~~~~~~~~l~~~~ad~v~~s 230 (243)
T 3qxg_A 165 GKPNPEPYLMALKK-GGLKAD---EAVVIENAPLGVEAGHKAG-IF-TIAVNTGPLDGQVLLDAGADLLFPS 230 (243)
T ss_dssp CTTSSHHHHHHHHH-TTCCGG---GEEEEECSHHHHHHHHHTT-CE-EEEECCSSSCHHHHHHTTCSEEESC
T ss_pred CCCChHHHHHHHHH-cCCCHH---HeEEEeCCHHHHHHHHHCC-CE-EEEEeCCCCCHHHHHhcCCCEEECC
Confidence 66888999999997 899875 799999 999999996 32 4666642 2222 368998875
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00068 Score=65.64 Aligned_cols=56 Identities=14% Similarity=0.089 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccc----cccccccCc
Q psy2719 746 QGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVK----SSWKQGSNH 805 (808)
Q Consensus 746 KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk----~~A~~~~~~ 805 (808)
+....+.++++ +|++++ ++++|| |+.|.+.+|-..+.|..++ ..+.+ ..|+|++++
T Consensus 103 ~~~~~~~~~~~-~~~~~~---~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~ 167 (179)
T 3l8h_A 103 LPGMYRDIARR-YDVDLA---GVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCED 167 (179)
T ss_dssp SSHHHHHHHHH-HTCCCT---TCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESS
T ss_pred CHHHHHHHHHH-cCCCHH---HEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecC
Confidence 34567888886 899876 799999 8999999863233344443 22222 457887765
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0016 Score=80.81 Aligned_cols=58 Identities=14% Similarity=0.097 Sum_probs=44.7
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeC-C-CCccccccccccCcC
Q psy2719 735 AIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVD-S-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 735 ~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~-~-~~~vk~~A~~~~~~~ 806 (808)
+..+.|. +|...++.+.+ .| ..|++|| |.+||+.++ .| |||+ | .+.+|++||+++.++
T Consensus 700 ~ar~~P~---~K~~iv~~lq~--~g------~~V~a~GDG~ND~~mLk~A~-vG--IAMg~ng~d~aK~aAD~Vl~~~ 763 (1034)
T 3ixz_A 700 FARTSPQ---QKLVIVESCQR--LG------AIVAVTGDGVNDSPALKKAD-IG--VAMGIAGSDAAKNAADMILLDD 763 (1034)
T ss_pred EEecCHH---HHHHHHHHHHH--cC------CEEEEECCcHHhHHHHHHCC-ee--EEeCCccCHHHHHhcCEEeccC
Confidence 3445554 89998887644 33 1599999 999999995 45 9998 6 688999999999864
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00064 Score=66.63 Aligned_cols=19 Identities=16% Similarity=0.160 Sum_probs=14.5
Q ss_pred CCeEEEEeCCC-hhhHHHhc
Q psy2719 621 DVNIGIISGRT-LENLMKMV 639 (808)
Q Consensus 621 g~~v~I~SGR~-~~~l~~~~ 639 (808)
|+.++|+||++ ...+...+
T Consensus 84 G~~v~ivT~~~~~~~~~~~l 103 (187)
T 2wm8_A 84 GVPGAAASRTSEIEGANQLL 103 (187)
T ss_dssp TCCEEEEECCSCHHHHHHHH
T ss_pred CceEEEEeCCCChHHHHHHH
Confidence 89999999998 56555444
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00052 Score=71.20 Aligned_cols=65 Identities=14% Similarity=0.187 Sum_probs=46.3
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
++|+||+||||++. ...+ +.+.++|++|++. |+.
T Consensus 2 k~i~~D~DGtL~~~-----~~~~-~~~~~~l~~l~~~----------------------------------------g~~ 35 (263)
T 1zjj_A 2 VAIIFDMDGVLYRG-----NRAI-PGVRELIEFLKER----------------------------------------GIP 35 (263)
T ss_dssp EEEEEECBTTTEET-----TEEC-TTHHHHHHHHHHH----------------------------------------TCC
T ss_pred eEEEEeCcCceEeC-----CEeC-ccHHHHHHHHHHC----------------------------------------CCe
Confidence 58999999999973 2234 6789999999877 889
Q ss_pred EEEEeCCChhhHHHh------cCcc--ceEEEcccceeE
Q psy2719 624 IGIISGRTLENLMKM------VNIE--KVTYAGSHGLEI 654 (808)
Q Consensus 624 v~I~SGR~~~~l~~~------~~~~--~~~li~~nG~~i 654 (808)
|+++|||+......+ +|+. ...++++||+.+
T Consensus 36 ~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~~~~ 74 (263)
T 1zjj_A 36 FAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATR 74 (263)
T ss_dssp EEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHHHHH
Confidence 999999886443332 2321 235777788765
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00081 Score=80.10 Aligned_cols=50 Identities=16% Similarity=0.180 Sum_probs=40.8
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
+|...++.+.++ + ..|+++| |.+||+.++ ++++|++ .+.+|+.||+++.+
T Consensus 604 ~K~~~v~~l~~~--g------~~V~~vGDG~ND~paL~~Ad---vGIAmg~g~d~a~~~AD~vl~~ 658 (736)
T 3rfu_A 604 DKSRIVSELKDK--G------LIVAMAGDGVNDAPALAKAD---IGIAMGTGTDVAIESAGVTLLH 658 (736)
T ss_dssp HHHHHHHHHHHH--S------CCEEEEECSSTTHHHHHHSS---EEEEESSSCSHHHHHCSEEECS
T ss_pred HHHHHHHHHHhc--C------CEEEEEECChHhHHHHHhCC---EEEEeCCccHHHHHhCCEEEcc
Confidence 688888887664 2 1699999 999999995 4599996 68899999999864
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.012 Score=65.66 Aligned_cols=146 Identities=9% Similarity=0.047 Sum_probs=83.9
Q ss_pred CeEEEEEcCcccc-----CChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCC
Q psy2719 311 LKVILGVDRLDYT-----KGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPN 385 (808)
Q Consensus 311 ~~iil~V~Rl~~~-----KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~ 385 (808)
..+++++|++... |.+..+++|+..+ ++ .++.++.+. + .+++ . .+ .
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~----~~v~~~g~~--~---~~~l----~----~~----~--- 318 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DA----EIIATFDAQ--Q---LEGV----A----NI----P--- 318 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SS----EEEECCCTT--T---TSSC----S----SC----C---
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CC----EEEEEECCc--c---hhhh----c----cC----C---
Confidence 4588899999764 8888889888642 22 234333211 1 0001 0 00 0
Q ss_pred CccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCC----Ccccc---CceEEECC
Q psy2719 386 WSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAG----AGGMM---HEALLVNP 458 (808)
Q Consensus 386 ~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G----~~~~l---~~~llvnP 458 (808)
..| .+.+++++.+ +|..||++|.. .| ..++.|+|++++ |+|+....+ .++.+ +.|+++++
T Consensus 319 -~~v-~~~~~~~~~~---ll~~ad~~V~~---~G-~~t~~Ea~~~G~----P~i~~p~~~dQ~~na~~l~~~g~g~~~~~ 385 (441)
T 2yjn_A 319 -DNV-RTVGFVPMHA---LLPTCAATVHH---GG-PGSWHTAAIHGV----PQVILPDGWDTGVRAQRTQEFGAGIALPV 385 (441)
T ss_dssp -SSE-EECCSCCHHH---HGGGCSEEEEC---CC-HHHHHHHHHTTC----CEEECCCSHHHHHHHHHHHHHTSEEECCT
T ss_pred -CCE-EEecCCCHHH---HHhhCCEEEEC---CC-HHHHHHHHHhCC----CEEEeCCcccHHHHHHHHHHcCCEEEccc
Confidence 123 4668888754 57999999973 34 568999999964 577766532 22223 24888887
Q ss_pred C--CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHH
Q psy2719 459 Y--EIDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMN 500 (808)
Q Consensus 459 ~--d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~ 500 (808)
. +.++++++|.++|+. + +.++++....+.+ .......-++
T Consensus 386 ~~~~~~~l~~~i~~ll~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 428 (441)
T 2yjn_A 386 PELTPDQLRESVKRVLDD-P-AHRAGAARMRDDMLAEPSPAEVVG 428 (441)
T ss_dssp TTCCHHHHHHHHHHHHHC-H-HHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHHhcC-H-HHHHHHHHHHHHHHcCCCHHHHHH
Confidence 6 889999999999974 3 3334444433333 3344444333
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0012 Score=60.32 Aligned_cols=48 Identities=21% Similarity=0.147 Sum_probs=38.0
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
+++++|+||||.. ...+.+.+.++|++|++. |++
T Consensus 3 k~i~~D~DgtL~~------~~~~~~~~~~~l~~L~~~----------------------------------------G~~ 36 (137)
T 2pr7_A 3 RGLIVDYAGVLDG------TDEDQRRWRNLLAAAKKN----------------------------------------GVG 36 (137)
T ss_dssp CEEEECSTTTTSS------CHHHHHHHHHHHHHHHHT----------------------------------------TCE
T ss_pred cEEEEeccceecC------CCccCccHHHHHHHHHHC----------------------------------------CCE
Confidence 5899999999943 234667889999999887 899
Q ss_pred EEEEeCCChhhHHH
Q psy2719 624 IGIISGRTLENLMK 637 (808)
Q Consensus 624 v~I~SGR~~~~l~~ 637 (808)
++|+|+++...+..
T Consensus 37 ~~i~S~~~~~~~~~ 50 (137)
T 2pr7_A 37 TVILSNDPGGLGAA 50 (137)
T ss_dssp EEEEECSCCGGGGH
T ss_pred EEEEeCCCHHHHHH
Confidence 99999987655433
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=96.52 E-value=0.17 Score=60.00 Aligned_cols=151 Identities=10% Similarity=0.051 Sum_probs=103.8
Q ss_pred CCCeEEEEEcCccccCChHHH-HHHHHHHH--HhCCCccC-cEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCC
Q psy2719 309 ENLKVILGVDRLDYTKGLVHR-IKAFERLL--EKHPEYVE-KVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKP 384 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~-l~A~~~ll--~~~p~~~~-~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~ 384 (808)
++..+++.|.|+...||.... +..+.+++ .++|+..- .+++|+.|.+.+++. ..+.+-+.+..++..+|..=...
T Consensus 548 pd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~-~aK~iIkli~~va~~in~Dp~v~ 626 (824)
T 2gj4_A 548 PNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYH-MAKMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCH-HHHHHHHHHHHHHHHHTTCTTTG
T ss_pred CCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHH-HHHHHHHHHHHHHHHhccCcccC
Confidence 467899999999999999998 88888875 35665321 357777776554432 22355566777777786431111
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcCeEEECCC--CCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----C--ceEEE
Q psy2719 385 NWSPIRYIFGCIGQEELAALYRDSAIALVTPL--RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----H--EALLV 456 (808)
Q Consensus 385 ~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~--~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~--~~llv 456 (808)
+.-.|+++.+ .+-+--..+|.+||+++.||. .|.=|+.-+=||.- |++-+|..-|+.-++ + +|+++
T Consensus 627 ~~lKVvFl~n-YdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN-----GaLtigtlDGanvEi~e~vG~~Ngf~F 700 (824)
T 2gj4_A 627 DRLRVIFLEN-YRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIF 700 (824)
T ss_dssp GGEEEEEETT-CCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEEC
T ss_pred CceEEEEECC-CCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CceEEEEecCccchhhhccCCCCEEEe
Confidence 2224666654 354445579999999999999 99999999999886 555666666765333 2 58998
Q ss_pred CCCCHHHHHHHH
Q psy2719 457 NPYEIDAAANVL 468 (808)
Q Consensus 457 nP~d~~~lA~ai 468 (808)
... .+++ .++
T Consensus 701 G~~-~~ev-~~l 710 (824)
T 2gj4_A 701 GMR-VEDV-DRL 710 (824)
T ss_dssp SCC-HHHH-HHH
T ss_pred CCc-HHHH-HHH
Confidence 775 6666 444
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.021 Score=62.55 Aligned_cols=96 Identities=10% Similarity=-0.009 Sum_probs=59.9
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEE----cCCCCCc--cccC---ceEEECCC--
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLIL----SPFAGAG--GMMH---EALLVNPY-- 459 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVl----S~~~G~~--~~l~---~~llvnP~-- 459 (808)
.+.++++.. .+++.||++|.. |-+.+..|||++++ |+|+ .+-.+.+ +.+. .|+++++.
T Consensus 286 ~~~~~~~~~---~ll~~ad~~v~~----~G~~t~~Eal~~G~----P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~ 354 (398)
T 3oti_A 286 RAVGWTPLH---TLLRTCTAVVHH----GGGGTVMTAIDAGI----PQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKV 354 (398)
T ss_dssp EEESSCCHH---HHHTTCSEEEEC----CCHHHHHHHHHHTC----CEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGC
T ss_pred EEEccCCHH---HHHhhCCEEEEC----CCHHHHHHHHHhCC----CEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCC
Confidence 445787655 467889999953 44568899999965 4666 4555556 6663 48899876
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHH
Q psy2719 460 EIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSF 502 (808)
Q Consensus 460 d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~ 502 (808)
+.+.++ ++|+. ++.+++..+..++.....++..-++.+
T Consensus 355 ~~~~l~----~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 392 (398)
T 3oti_A 355 DADLLR----RLIGD-ESLRTAAREVREEMVALPTPAETVRRI 392 (398)
T ss_dssp CHHHHH----HHHHC-HHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred CHHHHH----HHHcC-HHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 555555 67764 333333333344445556666655544
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.014 Score=63.64 Aligned_cols=103 Identities=12% Similarity=0.067 Sum_probs=65.1
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCC-C----CCcccc---CceEEECCC--C
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPF-A----GAGGMM---HEALLVNPY--E 460 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~-~----G~~~~l---~~~llvnP~--d 460 (808)
.+.+++++. .+++.||++|..| |. .+.+|+|++++| +|+.-. . +.++.+ +.|+.+++. |
T Consensus 284 ~~~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~P----~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~ 352 (402)
T 3ia7_A 284 EAHQWIPFH---SVLAHARACLTHG---TT-GAVLEAFAAGVP----LVLVPHFATEAAPSAERVIELGLGSVLRPDQLE 352 (402)
T ss_dssp EEESCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHTTCC----EEECGGGCGGGHHHHHHHHHTTSEEECCGGGCS
T ss_pred EEecCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHhCCC----EEEeCCCcccHHHHHHHHHHcCCEEEccCCCCC
Confidence 356788876 7899999999776 32 577999999754 554333 2 223333 248888876 8
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHHH
Q psy2719 461 IDAAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSSM 506 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l 506 (808)
.++++++|.++|+.+ +.++++..+.+.+ ....+..-++.+.+.+
T Consensus 353 ~~~l~~~~~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 353 PASIREAVERLAADS--AVRERVRRMQRDILSSGGPARAADEVEAYL 397 (402)
T ss_dssp HHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCH--HHHHHHHHHHHHHhhCChHHHHHHHHHHHH
Confidence 999999999999853 3334444433333 3444455444444333
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.025 Score=62.18 Aligned_cols=101 Identities=9% Similarity=0.032 Sum_probs=63.6
Q ss_pred EcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCC----Ccccc---CceEEECCC--CHH
Q psy2719 392 IFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAG----AGGMM---HEALLVNPY--EID 462 (808)
Q Consensus 392 ~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G----~~~~l---~~~llvnP~--d~~ 462 (808)
+.+++++. .+++.||++|..+ |. .+.+|++++++| +|+--..+ .++.+ +.|+.+++. +++
T Consensus 301 ~~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~P----~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~ 369 (415)
T 3rsc_A 301 AHRWVPHV---KVLEQATVCVTHG---GM-GTLMEALYWGRP----LVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGD 369 (415)
T ss_dssp EESCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHTTCC----EEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHH
T ss_pred EEecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHhCCC----EEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHH
Confidence 45788865 6789999999775 33 577999999754 55533222 22333 248888876 899
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhHHH-hcCCHHHHHHHHHHH
Q psy2719 463 AAANVLHRALCMPRDERELRMSQLRHRE-QQLDVNHWMNSFLSS 505 (808)
Q Consensus 463 ~lA~ai~~~L~~~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~ 505 (808)
+++++|.++|+.+ +.++++....+.+ ....+..-++.+.+.
T Consensus 370 ~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 411 (415)
T 3rsc_A 370 TLLAAVGAVAADP--ALLARVEAMRGHVRRAGGAARAADAVEAY 411 (415)
T ss_dssp HHHHHHHHHHTCH--HHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 9999999999853 3334444433333 344445545444433
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.082 Score=62.37 Aligned_cols=152 Identities=11% Similarity=0.098 Sum_probs=106.0
Q ss_pred CCCeEEEEEcCccccCChHH-HHHHHHHHHH--hCCCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCC
Q psy2719 309 ENLKVILGVDRLDYTKGLVH-RIKAFERLLE--KHPEYV-EKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKP 384 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~-~l~A~~~ll~--~~p~~~-~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~ 384 (808)
++.++++.|.|+...||... ++..+.++++ ++|+.. ..+++|+.|.+..+.. ..+.+-+.+..++..||..=...
T Consensus 514 pd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~-~aK~iIk~i~~va~~in~dp~~~ 592 (796)
T 2c4m_A 514 PESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYV-RAKAIIKLINSIADLVNNDPEVS 592 (796)
T ss_dssp TTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCH-HHHHHHHHHHHHHHHHHTCTTTT
T ss_pred CCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHH-HHHHHHHHHHHHHHHhccccccC
Confidence 46789999999999999999 8999988875 566521 2467777776554432 22345566777777777531112
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcCeEEECCC--CCCCChhHHHHHHhccCCCceEEEcCCCCCcccc------CceEEE
Q psy2719 385 NWSPIRYIFGCIGQEELAALYRDSAIALVTPL--RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM------HEALLV 456 (808)
Q Consensus 385 ~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~--~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l------~~~llv 456 (808)
+.-.|+++.+ .+-+--..+|.+||+++.||. .|.=|+.-+=||.- |.+-+|..-|+..++ .+|+++
T Consensus 593 ~~lKVvFl~n-Y~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~F 666 (796)
T 2c4m_A 593 PLLKVVFVEN-YNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN-----GALTLGTMDGANVEIVDSVGEENAYIF 666 (796)
T ss_dssp TTEEEEEETT-CCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT-----TCEEEEESSTHHHHHHHHHCGGGSEEE
T ss_pred CceEEEEECC-CCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeEEeccCCeEeehhhhcCCCcEEEe
Confidence 2224666654 344445578999999999999 99999999999886 455557777775544 258999
Q ss_pred CC--CCHHHHHHH
Q psy2719 457 NP--YEIDAAANV 467 (808)
Q Consensus 457 nP--~d~~~lA~a 467 (808)
.. .++.++-.+
T Consensus 667 G~~~~ev~~l~~~ 679 (796)
T 2c4m_A 667 GARVEELPALRES 679 (796)
T ss_dssp SCCTTTHHHHHHT
T ss_pred cCchhhHHHHHHh
Confidence 76 666665443
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0039 Score=61.74 Aligned_cols=59 Identities=12% Similarity=0.140 Sum_probs=41.5
Q ss_pred CceEEEEecccccccCCCCC-C-------ccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHH
Q psy2719 542 CKLSLILDYDGTLTPLTSHP-D-------LAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVL 613 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~-~-------~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l 613 (808)
..++|+||+||||++..... . ...+-+.+.++|++|+++
T Consensus 5 ~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~--------------------------------- 51 (196)
T 2oda_A 5 TFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQ--------------------------------- 51 (196)
T ss_dssp CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHH---------------------------------
T ss_pred cCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHHC---------------------------------
Confidence 34689999999998742110 0 113456777888888776
Q ss_pred HHHhCCCCCeEEEEeCCChhhHHHhcC
Q psy2719 614 ERLANMPDVNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 614 ~~l~~~pg~~v~I~SGR~~~~l~~~~~ 640 (808)
|++++|+||++...+....+
T Consensus 52 -------g~~~~i~T~~~~~~~~~~~~ 71 (196)
T 2oda_A 52 -------GMPCAWIDELPEALSTPLAA 71 (196)
T ss_dssp -------TCCEEEECCSCHHHHHHHHT
T ss_pred -------CCEEEEEcCChHHHHHHhcC
Confidence 89999999998877655544
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0042 Score=62.06 Aligned_cols=55 Identities=13% Similarity=0.073 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccE-EEeCC---CCc-cccccccccCc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACT-FRVDS---SPT-VKSSWKQGSNH 805 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~-vav~~---~~~-vk~~A~~~~~~ 805 (808)
.|...++.++++ +|++++ ++++|| |+.|.+.+| .. + +.|.. .++ .+..|++++++
T Consensus 132 P~p~~~~~~~~~-lgi~~~---~~~~VGD~~~Di~~a~~aG-~~-~~i~v~~g~~~~~~~~~~~d~vi~~ 195 (211)
T 2gmw_A 132 PHPGMLLSARDY-LHIDMA---ASYMVGDKLEDMQAAVAAN-VG-TKVLVRTGKPITPEAENAADWVLNS 195 (211)
T ss_dssp TSCHHHHHHHHH-HTBCGG---GCEEEESSHHHHHHHHHTT-CS-EEEEESSSSCCCHHHHHHCSEEESC
T ss_pred CCHHHHHHHHHH-cCCCHH---HEEEEcCCHHHHHHHHHCC-Cc-eEEEEecCCCccccccCCCCEEeCC
Confidence 456678888886 798875 799999 888888885 32 3 55542 222 23447777654
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=96.20 E-value=0.12 Score=60.98 Aligned_cols=150 Identities=11% Similarity=0.054 Sum_probs=105.1
Q ss_pred CCCeEEEEEcCccccCChHH-HHHHHHHHHH--hCCCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCC
Q psy2719 309 ENLKVILGVDRLDYTKGLVH-RIKAFERLLE--KHPEYV-EKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKP 384 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~-~l~A~~~ll~--~~p~~~-~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~ 384 (808)
++.++++.|.|+...||... ++..+.++++ .+|+.. ..+++|+.|.+.++.. ..+.+-+.+..++..||..=...
T Consensus 524 pd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~-~aK~iIk~i~~va~~in~Dp~~~ 602 (796)
T 1l5w_A 524 PQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY-LAKNIIFAINKVADVINNDPLVG 602 (796)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCH-HHHHHHHHHHHHHHHHHTCTTTG
T ss_pred CCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHH-HHHHHHHHHHHHHHHhccccccC
Confidence 46789999999999999999 8988888765 455521 2477777776554432 22345566777777777531111
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcCeEEECCC--CCCCChhHHHHHHhccCCCceEEEcCCCCCcccc------CceEEE
Q psy2719 385 NWSPIRYIFGCIGQEELAALYRDSAIALVTPL--RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM------HEALLV 456 (808)
Q Consensus 385 ~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~--~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l------~~~llv 456 (808)
+.-.|+++. ..+-+--..+|.+||+++.||. .|.=|+.-+=||.- |.+-+|..-|+..++ .+|+++
T Consensus 603 ~~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~F 676 (796)
T 1l5w_A 603 DKLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIF 676 (796)
T ss_dssp GGEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEEC
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeeecCcCCeeeehhhccCCCcEEEe
Confidence 112366554 4455555679999999999999 99999999999886 455667777876554 258999
Q ss_pred CCCCHHHHHH
Q psy2719 457 NPYEIDAAAN 466 (808)
Q Consensus 457 nP~d~~~lA~ 466 (808)
.. +++++.+
T Consensus 677 G~-~~~ev~~ 685 (796)
T 1l5w_A 677 GH-TVEQVKA 685 (796)
T ss_dssp SC-CHHHHHH
T ss_pred cC-CHHHHHH
Confidence 77 7777764
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0037 Score=65.38 Aligned_cols=32 Identities=13% Similarity=0.139 Sum_probs=25.8
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
.++|+||+||||++.. .+.+.+.++|++|++.
T Consensus 14 ~k~i~~D~DGtL~~~~------~~~~~~~~~l~~l~~~ 45 (284)
T 2hx1_A 14 YKCIFFDAFGVLKTYN------GLLPGIENTFDYLKAQ 45 (284)
T ss_dssp CSEEEECSBTTTEETT------EECTTHHHHHHHHHHT
T ss_pred CCEEEEcCcCCcCcCC------eeChhHHHHHHHHHHC
Confidence 4689999999999832 2457789999999887
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=96.06 E-value=0.014 Score=61.12 Aligned_cols=47 Identities=13% Similarity=0.122 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCcccccccccc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGS 803 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~ 803 (808)
+|..+++. ++.+ + ++++|| |+.|.+.+| . +++|++ .+..+..|++++
T Consensus 213 ~K~~~~~~-----l~~~-~---~~~~vGDs~~Di~~a~~ag-~--~v~~~~~~~~~~~~ad~v~ 264 (287)
T 3a1c_A 213 QKSEEVKK-----LQAK-E---VVAFVGDGINDAPALAQAD-L--GIAVGSGSDVAVESGDIVL 264 (287)
T ss_dssp CHHHHHHH-----HTTT-C---CEEEEECTTTCHHHHHHSS-E--EEEECCCSCCSSCCSSEEE
T ss_pred HHHHHHHH-----HhcC-C---eEEEEECCHHHHHHHHHCC-e--eEEeCCCCHHHHhhCCEEE
Confidence 78666554 3444 3 799999 999999995 3 488886 466778899988
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=95.35 E-value=0.017 Score=56.34 Aligned_cols=38 Identities=21% Similarity=0.316 Sum_probs=25.9
Q ss_pred ceEEEEecccccccCCCC---------CCccCCCHHHHHHHHHHhcC
Q psy2719 543 KLSLILDYDGTLTPLTSH---------PDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~---------~~~~~i~~~~~~~L~~L~~~ 580 (808)
-++|+||+||||+..... .....+.+.+.++|++|++.
T Consensus 3 ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~ 49 (189)
T 3ib6_A 3 LTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQL 49 (189)
T ss_dssp CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHT
T ss_pred ceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHC
Confidence 358999999999763110 01134567788888888877
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=95.26 E-value=0.0083 Score=60.10 Aligned_cols=55 Identities=16% Similarity=0.130 Sum_probs=36.7
Q ss_pred CCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccE-EEeCC---C-CccccccccccC
Q psy2719 744 WDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACT-FRVDS---S-PTVKSSWKQGSN 804 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~-vav~~---~-~~vk~~A~~~~~ 804 (808)
-.|..+++.++++ +|++++ ++++|| |+.|.+.+| +. + +.|.. . +.....++|+.+
T Consensus 137 KP~~~~~~~~~~~-~~i~~~---~~~~VGD~~~Di~~a~~aG-~~-~~i~v~~g~~~~~~~~~~~~~~i~ 200 (218)
T 2o2x_A 137 KPNPGMLVEAGKR-LALDLQ---RSLIVGDKLADMQAGKRAG-LA-QGWLVDGEAAVQPGFAIRPLRDSS 200 (218)
T ss_dssp TTSCHHHHHHHHH-HTCCGG---GCEEEESSHHHHHHHHHTT-CS-EEEEETCCCEEETTEEEEEESSHH
T ss_pred CCCHHHHHHHHHH-cCCCHH---HEEEEeCCHHHHHHHHHCC-CC-EeEEEecCCCCcccccCCCCEecc
Confidence 3566788888886 898865 799999 888888885 33 3 55542 1 233345666554
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.20 E-value=0.014 Score=56.45 Aligned_cols=41 Identities=24% Similarity=0.272 Sum_probs=28.5
Q ss_pred CCCceEEEEecccccccCCC------CCCccCCCHHHHHHHHHHhcC
Q psy2719 540 GNCKLSLILDYDGTLTPLTS------HPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 540 ~~~~rli~~D~DGTLl~~~~------~~~~~~i~~~~~~~L~~L~~~ 580 (808)
.+..++++||.||||....+ ..+...+.+.+.++|++|++.
T Consensus 11 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~ 57 (176)
T 2fpr_A 11 GSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKA 57 (176)
T ss_dssp --CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHT
T ss_pred CCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHC
Confidence 35678999999999987521 112345667888888888877
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=95.04 E-value=0.018 Score=56.49 Aligned_cols=58 Identities=14% Similarity=0.056 Sum_probs=48.4
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+-.|+.+++.++++ +|++++ ++++|| |++|.+.+| . -+++|++ .+.+++.|+|++++.
T Consensus 126 ~kp~~~~~~~~~~~-~g~~~~---~~i~iGD~~~Di~~a~~aG-~-~~i~v~~~~~~~~~~ad~v~~~~ 188 (205)
T 3m9l_A 126 PKPHPGGLLKLAEA-WDVSPS---RMVMVGDYRFDLDCGRAAG-T-RTVLVNLPDNPWPELTDWHARDC 188 (205)
T ss_dssp CTTSSHHHHHHHHH-TTCCGG---GEEEEESSHHHHHHHHHHT-C-EEEECSSSSCSCGGGCSEECSSH
T ss_pred CCCCHHHHHHHHHH-cCCCHH---HEEEECCCHHHHHHHHHcC-C-EEEEEeCCCCcccccCCEEeCCH
Confidence 45678899999997 899875 799999 999999995 2 2699996 578899999999863
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=94.98 E-value=0.021 Score=63.42 Aligned_cols=39 Identities=28% Similarity=0.313 Sum_probs=28.0
Q ss_pred CceEEEEecccccccCCC------CCCc-cCCCHHHHHHHHHHhcC
Q psy2719 542 CKLSLILDYDGTLTPLTS------HPDL-AVMSEETKRVLERLANM 580 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~------~~~~-~~i~~~~~~~L~~L~~~ 580 (808)
..++++||+||||..... .+.+ ..+.+.+.++|++|++.
T Consensus 57 ~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~ 102 (416)
T 3zvl_A 57 QGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE 102 (416)
T ss_dssp CSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHT
T ss_pred CCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHC
Confidence 457999999999986431 1111 23568899999999887
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=94.88 E-value=0.01 Score=58.57 Aligned_cols=54 Identities=13% Similarity=-0.167 Sum_probs=43.9
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
.|+.+++.++++ +|++++ ++++|| |++|++.+| ++++|.| .+++| .|+|+++++
T Consensus 146 p~~~~~~~~~~~-lgi~~~---~~i~iGD~~nDi~~a~~aG---~~~~~~~~~~~~~-~a~~v~~~~ 204 (221)
T 2wf7_A 146 PAPDIFIAAAHA-VGVAPS---ESIGLEDSQAGIQAIKDSG---ALPIGVGRPEDLG-DDIVIVPDT 204 (221)
T ss_dssp TSSHHHHHHHHH-TTCCGG---GEEEEESSHHHHHHHHHHT---CEEEEESCHHHHC-SSSEEESSG
T ss_pred CChHHHHHHHHH-cCCChh---HeEEEeCCHHHHHHHHHCC---CEEEEECCHHHhc-cccchhcCH
Confidence 455699999997 899875 799999 999999994 4477776 46788 899999865
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=94.63 E-value=0.19 Score=55.38 Aligned_cols=135 Identities=16% Similarity=0.113 Sum_probs=80.4
Q ss_pred CCeEEEEEcCc-cccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy2719 310 NLKVILGVDRL-DYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSP 388 (808)
Q Consensus 310 ~~~iil~V~Rl-~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~ 388 (808)
...++++.|++ ++.|.+..+++|++.+ + . + +++++|.... . . ..+. ..
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~--~-~v~~~g~~~~-~------~--------~~~~--------~~ 286 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-R--R-VILSRGWADL-V------L--------PDDG--------AD 286 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-C--C-EEECTTCTTC-C------C--------SSCG--------GG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-C--e-EEEEeCCCcc-c------c--------cCCC--------CC
Confidence 35688899999 5888888888888653 2 2 1 2222231110 0 0 0000 12
Q ss_pred EEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCC----Ccccc---CceEEECCC--
Q psy2719 389 IRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAG----AGGMM---HEALLVNPY-- 459 (808)
Q Consensus 389 v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G----~~~~l---~~~llvnP~-- 459 (808)
+ .+.+++++.++ +..||+||..+ |. .++.|||++++ |+|+--..+ -++.+ +.|+.+++.
T Consensus 287 v-~~~~~~~~~~~---l~~~d~~v~~~---G~-~t~~Ea~~~G~----P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 354 (415)
T 1iir_A 287 C-FAIGEVNHQVL---FGRVAAVIHHG---GA-GTTHVAARAGA----PQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (415)
T ss_dssp E-EECSSCCHHHH---GGGSSEEEECC---CH-HHHHHHHHHTC----CEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred E-EEeCcCChHHH---HhhCCEEEeCC---Ch-hHHHHHHHcCC----CEEECCCCCccHHHHHHHHHCCCcccCCcCCC
Confidence 3 45688987654 69999999753 44 78999999965 466655433 12223 248888764
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH
Q psy2719 460 EIDAAANVLHRALCMPRDERELRMSQLRHRE 490 (808)
Q Consensus 460 d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v 490 (808)
+.++++++|.++ +. + +.++++....+.+
T Consensus 355 ~~~~l~~~i~~l-~~-~-~~~~~~~~~~~~~ 382 (415)
T 1iir_A 355 TFDSLSAALATA-LT-P-ETHARATAVAGTI 382 (415)
T ss_dssp CHHHHHHHHHHH-TS-H-HHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHH-cC-H-HHHHHHHHHHHHH
Confidence 789999999999 64 3 3344444443333
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=94.61 E-value=0.0079 Score=62.18 Aligned_cols=17 Identities=18% Similarity=0.196 Sum_probs=14.5
Q ss_pred CCceEEEEecccccccC
Q psy2719 541 NCKLSLILDYDGTLTPL 557 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~ 557 (808)
.++.+|+||+||||++.
T Consensus 56 ~~~~avVfDIDgTlldn 72 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDN 72 (262)
T ss_dssp TCEEEEEECCBTTTEEC
T ss_pred CCCeEEEEECCCcCCCC
Confidence 45679999999999985
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=94.57 E-value=0.013 Score=60.52 Aligned_cols=16 Identities=25% Similarity=0.329 Sum_probs=13.3
Q ss_pred CceEEEEecccccccC
Q psy2719 542 CKLSLILDYDGTLTPL 557 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~ 557 (808)
++.+++||+||||++.
T Consensus 57 ~~~avVfDIDgTlldn 72 (260)
T 3pct_A 57 KKKAVVVDLDETMIDN 72 (260)
T ss_dssp -CEEEEECCBTTTEEC
T ss_pred CCCEEEEECCccCcCC
Confidence 4569999999999985
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=94.56 E-value=0.028 Score=56.20 Aligned_cols=24 Identities=13% Similarity=0.250 Sum_probs=17.7
Q ss_pred HHHHHHHHHhCCCCCeEEEEeCCCh
Q psy2719 608 ETKRVLERLANMPDVNIGIISGRTL 632 (808)
Q Consensus 608 ~~~~~l~~l~~~pg~~v~I~SGR~~ 632 (808)
...+.|+.|.+ .|++++|+|+++.
T Consensus 92 ~~~e~l~~L~~-~G~~l~ivTn~~~ 115 (211)
T 2b82_A 92 VARQLIDMHVR-RGDAIFFVTGRSP 115 (211)
T ss_dssp HHHHHHHHHHH-HTCEEEEEECSCC
T ss_pred HHHHHHHHHHH-CCCEEEEEcCCcH
Confidence 45666766654 3899999999964
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=94.47 E-value=0.33 Score=57.74 Aligned_cols=175 Identities=10% Similarity=0.085 Sum_probs=106.2
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSP 388 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~ 388 (808)
.+..++.+.-++. |=-+..++.+.++|++.|+- +|++...+. .. ++.+.+...+. |.. -..
T Consensus 521 ~~~v~f~~fN~~~--Ki~p~~~~~W~~IL~~vP~S----~L~Ll~~~~--~~------~~~l~~~~~~~----gi~-~~r 581 (723)
T 4gyw_A 521 EDAIVYCNFNQLY--KIDPSTLQMWANILKRVPNS----VLWLLRFPA--VG------EPNIQQYAQNM----GLP-QNR 581 (723)
T ss_dssp TTSEEEECCSCGG--GCCHHHHHHHHHHHHHCSSE----EEEEEETTG--GG------HHHHHHHHHHT----TCC-GGG
T ss_pred CCCEEEEeCCccc--cCCHHHHHHHHHHHHhCCCC----eEEEEeCcH--HH------HHHHHHHHHhc----CCC-cCe
Confidence 4556666677764 55689999999999999985 366555332 11 12233333332 221 134
Q ss_pred EEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCc------cccCc-eE--EECCC
Q psy2719 389 IRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAG------GMMHE-AL--LVNPY 459 (808)
Q Consensus 389 v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~------~~l~~-~l--lvnP~ 459 (808)
|++ .+..+.++..+.|+.+||++-|--+-| +.+..||+.+| ++|+|--+... ..+.. |+ +| -.
T Consensus 582 ~~f-~~~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~G-----vPvvt~~g~~~~sR~~~s~l~~~gl~e~i-a~ 653 (723)
T 4gyw_A 582 IIF-SPVAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAG-----TPMVTMPGETLASRVAASQLTCLGCLELI-AK 653 (723)
T ss_dssp EEE-EECCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHTT-----CCEEBCCCSSGGGTHHHHHHHHHTCGGGB-CS
T ss_pred EEE-CCCCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHcC-----CCEEEccCCCccHhHHHHHHHHcCCcccc-cC
Confidence 554 567899999999999999999999877 79999999994 45555432211 11110 11 12 24
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHh---cCCHHHHHHHHHHHHHcccc
Q psy2719 460 EIDAAANVLHRALCMPRDERELRMSQLRHREQ---QLDVNHWMNSFLSSMGALDN 511 (808)
Q Consensus 460 d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~---~~~~~~W~~~~l~~l~~~~~ 511 (808)
|.++..+.-.++-+. .+.+....+.+++... -+|...|++.+-..+.+.++
T Consensus 654 ~~~~Y~~~a~~la~d-~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~ 707 (723)
T 4gyw_A 654 NRQEYEDIAVKLGTD-LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWE 707 (723)
T ss_dssp SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHH
Confidence 556555444444443 3333333334444443 34888999888888877643
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=94.41 E-value=0.024 Score=56.26 Aligned_cols=61 Identities=8% Similarity=0.039 Sum_probs=48.5
Q ss_pred eCCCC--CCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCC-C-------ccccc-ccccc
Q psy2719 739 KPPVK--WDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSS-P-------TVKSS-WKQGS 803 (808)
Q Consensus 739 ~p~~~--v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~-~-------~vk~~-A~~~~ 803 (808)
.++ + .+|+.+++.++++ +|++++ ++++|| |++|++.+| .+ +++|++. . ++|+. |+|++
T Consensus 137 ~~~-~~~kpk~~~~~~~~~~-l~~~~~---~~i~iGD~~~Di~~a~~aG-~~-~i~~~~~~~~~~~~~~~l~~~~ad~v~ 209 (229)
T 2fdr_A 137 LGA-DRVKPKPDIFLHGAAQ-FGVSPD---RVVVVEDSVHGIHGARAAG-MR-VIGFTGASHTYPSHADRLTDAGAETVI 209 (229)
T ss_dssp HCT-TCCTTSSHHHHHHHHH-HTCCGG---GEEEEESSHHHHHHHHHTT-CE-EEEECCSTTCCTTHHHHHHHHTCSEEE
T ss_pred ccc-CCCCcCHHHHHHHHHH-cCCChh---HeEEEcCCHHHHHHHHHCC-CE-EEEEecCCccchhhhHHHhhcCCceee
Confidence 455 7 8999999999997 899875 799999 999999996 32 4777753 2 37777 99998
Q ss_pred CcC
Q psy2719 804 NHT 806 (808)
Q Consensus 804 ~~~ 806 (808)
++.
T Consensus 210 ~~~ 212 (229)
T 2fdr_A 210 SRM 212 (229)
T ss_dssp SCG
T ss_pred cCH
Confidence 764
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=94.19 E-value=0.053 Score=52.90 Aligned_cols=30 Identities=13% Similarity=0.226 Sum_probs=22.0
Q ss_pred chHHHHHHHHHHhCCCCCeEEEEeCCChhh
Q psy2719 605 MSEETKRVLERLANMPDVNIGIISGRTLEN 634 (808)
Q Consensus 605 ~~~~~~~~l~~l~~~pg~~v~I~SGR~~~~ 634 (808)
+-+.+.+.|+.|.+.+|+.++|+|+++...
T Consensus 74 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~ 103 (193)
T 2i7d_A 74 PIPGALDAVREMNDLPDTQVFICTSPLLKY 103 (193)
T ss_dssp BCTTHHHHHHHHHTSTTEEEEEEECCCSSC
T ss_pred cCcCHHHHHHHHHhCCCCeEEEEeCCChhh
Confidence 344577888888764478999999987543
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=93.76 E-value=0.036 Score=60.05 Aligned_cols=46 Identities=15% Similarity=0.152 Sum_probs=32.3
Q ss_pred CCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccc
Q psy2719 540 GNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRT 592 (808)
Q Consensus 540 ~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~ 592 (808)
.++++.++||+||||.... .+-+.+.++|++|++. +..+.++|+.+
T Consensus 10 ~~~~~~~l~D~DGvl~~g~------~~~p~a~~~l~~l~~~-g~~~~~vTNn~ 55 (352)
T 3kc2_A 10 TSKKIAFAFDIDGVLFRGK------KPIAGASDALKLLNRN-KIPYILLTNGG 55 (352)
T ss_dssp --CCEEEEECCBTTTEETT------EECTTHHHHHHHHHHT-TCCEEEECSCC
T ss_pred hccCCEEEEECCCeeEcCC------eeCcCHHHHHHHHHHC-CCEEEEEeCCC
Confidence 3467899999999999732 2346788899999886 45566666543
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=93.64 E-value=0.67 Score=50.73 Aligned_cols=138 Identities=13% Similarity=0.089 Sum_probs=81.7
Q ss_pred CCCeEEEEEcCcc-ccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy2719 309 ENLKVILGVDRLD-YTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWS 387 (808)
Q Consensus 309 ~~~~iil~V~Rl~-~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~ 387 (808)
....++++.|++. +.+.+..+++|++.+ +.+ +|..+.+.... ..+. -.
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~----------------~~~~------~~ 268 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLG----------------RIDE------GD 268 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCC----------------CSSC------CT
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCcccc----------------cccC------CC
Confidence 3456788899998 666677777777653 222 33332221100 0000 01
Q ss_pred cEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCc----ccc---CceEEECCC-
Q psy2719 388 PIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAG----GMM---HEALLVNPY- 459 (808)
Q Consensus 388 ~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~----~~l---~~~llvnP~- 459 (808)
++. +.+++++.+ ++..||++|..+ |. .+..|++++++| +|+--+.+-- ..+ +.|+.+++.
T Consensus 269 ~v~-~~~~~~~~~---ll~~~d~~v~~g---G~-~t~~Eal~~GvP----~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~ 336 (404)
T 3h4t_A 269 DCL-VVGEVNHQV---LFGRVAAVVHHG---GA-GTTTAVTRAGAP----QVVVPQKADQPYYAGRVADLGVGVAHDGPT 336 (404)
T ss_dssp TEE-EESSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHHTCC----EEECCCSTTHHHHHHHHHHHTSEEECSSSS
T ss_pred CEE-EecCCCHHH---HHhhCcEEEECC---cH-HHHHHHHHcCCC----EEEcCCcccHHHHHHHHHHCCCEeccCcCC
Confidence 343 457888755 568999999665 33 577899999754 5554443321 112 247777654
Q ss_pred -CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhc
Q psy2719 460 -EIDAAANVLHRALCMPRDERELRMSQLRHREQQ 492 (808)
Q Consensus 460 -d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~ 492 (808)
+.++++++|.++|+ + +.++++....+.+..
T Consensus 337 ~~~~~l~~ai~~ll~-~--~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 337 PTVESLSAALATALT-P--GIRARAAAVAGTIRT 367 (404)
T ss_dssp CCHHHHHHHHHHHTS-H--HHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHHHhC-H--HHHHHHHHHHHHHhh
Confidence 78999999999997 3 344455555444444
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=93.60 E-value=0.81 Score=50.19 Aligned_cols=91 Identities=8% Similarity=0.073 Sum_probs=59.9
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCC----Ccccc---CceEEECCC--CH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAG----AGGMM---HEALLVNPY--EI 461 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G----~~~~l---~~~llvnP~--d~ 461 (808)
.+.+++++. .+|+.||++|..+ | ..+.+||+++++ |+|+.-..+ .++.+ +.|+.+++. +.
T Consensus 308 ~~~~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G~----P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~ 376 (424)
T 2iya_A 308 EVHQWVPQL---DILTKASAFITHA---G-MGSTMEALSNAV----PMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTA 376 (424)
T ss_dssp EEESSCCHH---HHHTTCSEEEECC---C-HHHHHHHHHTTC----CEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCH
T ss_pred EEecCCCHH---HHHhhCCEEEECC---c-hhHHHHHHHcCC----CEEEecCccchHHHHHHHHHCCCEEEcCcCCCCH
Confidence 345788875 5799999988653 3 378999999965 466665432 11222 247888765 88
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCC
Q psy2719 462 DAAANVLHRALCMPRDERELRMSQLRHREQQLD 494 (808)
Q Consensus 462 ~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~ 494 (808)
++++++|.++|+.+ +.++++..+.+.+...+
T Consensus 377 ~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~ 407 (424)
T 2iya_A 377 EKLREAVLAVASDP--GVAERLAAVRQEIREAG 407 (424)
T ss_dssp HHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcC
Confidence 99999999999743 34445554444444333
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=93.57 E-value=0.041 Score=55.53 Aligned_cols=61 Identities=10% Similarity=0.071 Sum_probs=47.8
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC---------CCcc--cccccc
Q psy2719 737 EAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS---------SPTV--KSSWKQ 801 (808)
Q Consensus 737 Ev~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~---------~~~v--k~~A~~ 801 (808)
|..+. +..|+.+++.++++ +|++++ ++++|| |++|.+.+| .+ ++|.+ .+++ +..|+|
T Consensus 167 ~~~~~-~kp~~~~~~~~~~~-lgi~~~---~~~~iGD~~~Di~~a~~aG-~~--~~~~~~~~~~g~~~~~~l~~~~~ad~ 238 (254)
T 3umc_A 167 DLFGH-YKPDPQVYLGACRL-LDLPPQ---EVMLCAAHNYDLKAARALG-LK--TAFIARPLEYGPGQSQDLAAEQDWDL 238 (254)
T ss_dssp HHHTC-CTTSHHHHHHHHHH-HTCCGG---GEEEEESCHHHHHHHHHTT-CE--EEEECCTTTTCTTCCSSSSCSSCCSE
T ss_pred ccccc-CCCCHHHHHHHHHH-cCCChH---HEEEEcCchHhHHHHHHCC-Ce--EEEEecCCccCCCCCcccccCCCCcE
Confidence 45565 78999999999997 899875 799999 999999995 43 55543 2344 788999
Q ss_pred ccCc
Q psy2719 802 GSNH 805 (808)
Q Consensus 802 ~~~~ 805 (808)
++++
T Consensus 239 v~~~ 242 (254)
T 3umc_A 239 IASD 242 (254)
T ss_dssp EESS
T ss_pred EECC
Confidence 9876
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=93.37 E-value=0.043 Score=54.66 Aligned_cols=56 Identities=5% Similarity=-0.203 Sum_probs=38.6
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+-.|+.+++.++++ +|++++ ++++|| |+.|.+.+| +.++|.+ .++++ .|+|++++.
T Consensus 145 ~Kp~~~~~~~~~~~-lgi~~~---~~i~vGDs~~Di~~a~~aG---~~~~~~~~~~~~~-~ad~v~~s~ 205 (233)
T 3nas_A 145 GKPDPDIFLTAAAM-LDVSPA---DCAAIEDAEAGISAIKSAG---MFAVGVGQGQPML-GADLVVRQT 205 (233)
T ss_dssp ----CCHHHHHHHH-HTSCGG---GEEEEECSHHHHHHHHHTT---CEEEECC--------CSEECSSG
T ss_pred CCCChHHHHHHHHH-cCCCHH---HEEEEeCCHHHHHHHHHcC---CEEEEECCccccc-cCCEEeCCh
Confidence 44667799999997 899875 799999 999999995 4477776 46666 899999864
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=92.37 E-value=0.046 Score=55.42 Aligned_cols=33 Identities=15% Similarity=0.375 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhcc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQ 781 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~ 781 (808)
.++.+++.++++ +|++++ ++++|| |+.|.+.+|
T Consensus 163 p~~~~~~~~~~~-l~~~~~---~~i~iGD~~~~Di~~a~~aG 200 (251)
T 2pke_A 163 KDPQTYARVLSE-FDLPAE---RFVMIGNSLRSDVEPVLAIG 200 (251)
T ss_dssp CSHHHHHHHHHH-HTCCGG---GEEEEESCCCCCCHHHHHTT
T ss_pred CCHHHHHHHHHH-hCcCch---hEEEECCCchhhHHHHHHCC
Confidence 468899999997 899875 799999 889999996
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=92.01 E-value=0.51 Score=51.74 Aligned_cols=86 Identities=9% Similarity=0.090 Sum_probs=56.1
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCC----Ccccc---CceEEECC--CCH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAG----AGGMM---HEALLVNP--YEI 461 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G----~~~~l---~~~llvnP--~d~ 461 (808)
.+.+++++.+ +|..||++|. .-|. .++.|++++++| +|+--..+ .+..+ +.|+.+++ .+.
T Consensus 289 ~~~~~~~~~~---ll~~~d~~v~---~~G~-~t~~Ea~~~G~P----~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~ 357 (416)
T 1rrv_A 289 FAIDEVNFQA---LFRRVAAVIH---HGSA-GTEHVATRAGVP----QLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTF 357 (416)
T ss_dssp EEESSCCHHH---HGGGSSEEEE---CCCH-HHHHHHHHHTCC----EEECCCSBTHHHHHHHHHHHTSEEECSSSCCCH
T ss_pred EEeccCChHH---HhccCCEEEe---cCCh-hHHHHHHHcCCC----EEEccCCCCcHHHHHHHHHCCCccCCCCCCCCH
Confidence 3557888655 5799999997 3454 599999999754 55544422 12222 24787765 578
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHhHHH
Q psy2719 462 DAAANVLHRALCMPRDERELRMSQLRHRE 490 (808)
Q Consensus 462 ~~lA~ai~~~L~~~~~e~~~r~~~~~~~v 490 (808)
++++++|.++ +. + +.+++++...+.+
T Consensus 358 ~~l~~~i~~l-~~-~-~~~~~~~~~~~~~ 383 (416)
T 1rrv_A 358 ESLSAALTTV-LA-P-ETRARAEAVAGMV 383 (416)
T ss_dssp HHHHHHHHHH-TS-H-HHHHHHHHHTTTC
T ss_pred HHHHHHHHHh-hC-H-HHHHHHHHHHHHH
Confidence 9999999999 64 3 3444555444333
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=91.96 E-value=0.049 Score=53.98 Aligned_cols=59 Identities=5% Similarity=-0.071 Sum_probs=45.7
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeC-C-CCccccc-cccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVD-S-SPTVKSS-WKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~-~-~~~vk~~-A~~~~~~ 805 (808)
+..|+.+++.++++ +|++++ ++++|| |+.|++.+|-.++.|+++ + .+++++. |+|++++
T Consensus 146 ~kp~~~~~~~~~~~-l~~~~~---~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~ 211 (233)
T 3s6j_A 146 GKPDPDLFLAAAKK-IGAPID---ECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYED 211 (233)
T ss_dssp CTTSTHHHHHHHHH-TTCCGG---GEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESS
T ss_pred CCCChHHHHHHHHH-hCCCHH---HEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECC
Confidence 67889999999997 899875 799999 999999996334345555 3 3556665 8998875
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=91.84 E-value=0.1 Score=50.97 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 607 EETKRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 607 ~~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
+.+.+.|+.|.+ .|+.++|+|+.....+...+
T Consensus 73 ~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l 104 (205)
T 3m9l_A 73 PGAVELVRELAG-RGYRLGILTRNARELAHVTL 104 (205)
T ss_dssp TTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHH
T ss_pred ccHHHHHHHHHh-cCCeEEEEeCCchHHHHHHH
Confidence 345667777755 48999999999877766554
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.68 E-value=0.099 Score=52.73 Aligned_cols=60 Identities=8% Similarity=-0.076 Sum_probs=46.8
Q ss_pred CCCHHHHHHHHHHHhcCCCC--CcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 743 KWDQGRASIHILRTMYGVDW--SERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~--~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+-.|..+++.++++ +|+++ + ++++|| |++|.+.+|-..+.|++++ .++++..|+|++++.
T Consensus 170 ~Kp~~~~~~~~~~~-lgi~~~~~---~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl 236 (250)
T 3l5k_A 170 GKPDPDIFLACAKR-FSPPPAME---KCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSL 236 (250)
T ss_dssp CTTSTHHHHHHHHT-SSSCCCGG---GEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCG
T ss_pred CCCChHHHHHHHHH-cCCCCCcc---eEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCH
Confidence 45678899999996 89876 4 799999 9999999963233445555 467899999999863
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=91.61 E-value=0.12 Score=55.03 Aligned_cols=54 Identities=11% Similarity=0.152 Sum_probs=44.2
Q ss_pred CCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccC
Q psy2719 744 WDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSN 804 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~ 804 (808)
-.|..+++.++++ +|++++ ++++|| |+.|.+.+| ++++++..+.+++.|++++.
T Consensus 245 kpkp~~~~~~~~~-lgv~~~---~~i~VGDs~~Di~aa~~AG---~~va~~~~~~~~~~a~~~i~ 302 (317)
T 4eze_A 245 ANKKQTLVDLAAR-LNIATE---NIIACGDGANDLPMLEHAG---TGIAWKAKPVVREKIHHQIN 302 (317)
T ss_dssp HHHHHHHHHHHHH-HTCCGG---GEEEEECSGGGHHHHHHSS---EEEEESCCHHHHHHCCEEES
T ss_pred CCCHHHHHHHHHH-cCCCcc---eEEEEeCCHHHHHHHHHCC---CeEEeCCCHHHHHhcCeeeC
Confidence 3678888999986 898865 799999 999999995 45888667788888988765
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=91.22 E-value=0.24 Score=48.77 Aligned_cols=56 Identities=5% Similarity=-0.078 Sum_probs=44.2
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEe----CC-CCccccccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRV----DS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav----~~-~~~vk~~A~~~~~~ 805 (808)
+-.|+.+++.++++ +|++++ ++++|| |+.|.+.+| .+ +++ ++ .+.++..|++++++
T Consensus 151 ~kp~~~~~~~~~~~-~~~~~~---~~~~iGD~~~Di~~a~~aG-~~--~~~~~~~~~~~~~~~~~~~~~~~~ 215 (230)
T 3um9_A 151 FKPHQKVYELAMDT-LHLGES---EILFVSCNSWDATGAKYFG-YP--VCWINRSNGVFDQLGVVPDIVVSD 215 (230)
T ss_dssp CTTCHHHHHHHHHH-HTCCGG---GEEEEESCHHHHHHHHHHT-CC--EEEECTTSCCCCCSSCCCSEEESS
T ss_pred CCCChHHHHHHHHH-hCCCcc---cEEEEeCCHHHHHHHHHCC-CE--EEEEeCCCCccccccCCCcEEeCC
Confidence 45678899999997 899875 799999 999999995 33 555 33 36678899998876
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=90.92 E-value=0.29 Score=48.35 Aligned_cols=57 Identities=4% Similarity=-0.112 Sum_probs=45.3
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEeCC-CC--ccccccccccCcC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRVDS-SP--TVKSSWKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~~-~~--~vk~~A~~~~~~~ 806 (808)
+-.|+.+++.++++ +|++++ ++++|| |++|.+.+| . .++|.+ .. ..+..|+|+++|.
T Consensus 161 ~kp~~~~~~~~~~~-lgi~~~---~~~~iGD~~~~Di~~a~~aG-~--~~~~~~~~~~~~~~~~~d~vi~sl 225 (240)
T 3qnm_A 161 LKPRPEIFHFALSA-TQSELR---ESLMIGDSWEADITGAHGVG-M--HQAFYNVTERTVFPFQPTYHIHSL 225 (240)
T ss_dssp CTTSHHHHHHHHHH-TTCCGG---GEEEEESCTTTTHHHHHHTT-C--EEEEECCSCCCCCSSCCSEEESST
T ss_pred CCCCHHHHHHHHHH-cCCCcc---cEEEECCCchHhHHHHHHcC-C--eEEEEcCCCCCCcCCCCceEECCH
Confidence 66889999999997 899875 899999 888999985 3 355554 33 6778899998863
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=90.83 E-value=0.16 Score=49.56 Aligned_cols=56 Identities=11% Similarity=0.122 Sum_probs=43.2
Q ss_pred CCCH--HHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEe-C----CCCccccccccccCcC
Q psy2719 743 KWDQ--GRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRV-D----SSPTVKSSWKQGSNHT 806 (808)
Q Consensus 743 ~v~K--G~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav-~----~~~~vk~~A~~~~~~~ 806 (808)
+.+| +.+++.++++ +|++++ ++++|| |++|.+.+| .+ +++ . +.++++. |++++++.
T Consensus 135 ~~~KP~~~~~~~~~~~-~~~~~~---~~i~vGD~~~Di~~a~~aG-~~--~~~~~~~~~~~~~~~~-a~~~~~~~ 201 (209)
T 2hdo_A 135 PKRKPDPLPLLTALEK-VNVAPQ---NALFIGDSVSDEQTAQAAN-VD--FGLAVWGMDPNADHQK-VAHRFQKP 201 (209)
T ss_dssp SCCTTSSHHHHHHHHH-TTCCGG---GEEEEESSHHHHHHHHHHT-CE--EEEEGGGCCTTGGGSC-CSEEESSG
T ss_pred CCCCCCcHHHHHHHHH-cCCCcc---cEEEECCChhhHHHHHHcC-Ce--EEEEcCCCCChhhhcc-CCEEeCCH
Confidence 5678 9999999997 899875 799999 999999985 33 444 2 2456777 99998764
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=90.81 E-value=0.22 Score=49.08 Aligned_cols=15 Identities=27% Similarity=0.401 Sum_probs=12.9
Q ss_pred ceEEEEecccccccC
Q psy2719 543 KLSLILDYDGTLTPL 557 (808)
Q Consensus 543 ~rli~~D~DGTLl~~ 557 (808)
.++|+||+||||++.
T Consensus 5 ~k~i~fDlDGTL~d~ 19 (230)
T 3um9_A 5 IKAVVFDLYGTLYDV 19 (230)
T ss_dssp CCEEEECSBTTTBCG
T ss_pred ceEEEEcCCCCcCcc
Confidence 468999999999983
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=90.59 E-value=0.064 Score=54.76 Aligned_cols=47 Identities=6% Similarity=-0.092 Sum_probs=37.4
Q ss_pred eCCCCCCHHHHHHHHHHHhcCCCC-CcceeEEEEe----CHHHHHhccCCccEEEeC
Q psy2719 739 KPPVKWDQGRASIHILRTMYGVDW-SERVRIIYAG----NEDAMLALQGIACTFRVD 790 (808)
Q Consensus 739 ~p~~~v~KG~av~~ll~~~~~i~~-~~~~~via~G----D~~Mf~~~~~~~~~vav~ 790 (808)
.+. +..|+.+++.++++ +|+++ + ++++|| |++|.+.+|-..+.|+++
T Consensus 164 ~~~-~kp~~~~~~~~~~~-lgi~~~~---~~i~vGD~~~Di~~a~~aG~~~v~v~~g 215 (277)
T 3iru_A 164 VVR-GRPFPDMALKVALE-LEVGHVN---GCIKVDDTLPGIEEGLRAGMWTVGVSCS 215 (277)
T ss_dssp SSS-CTTSSHHHHHHHHH-HTCSCGG---GEEEEESSHHHHHHHHHTTCEEEEECSS
T ss_pred cCC-CCCCHHHHHHHHHH-cCCCCCc---cEEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence 454 77899999999997 89987 5 799999 999999997323445555
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=90.03 E-value=0.27 Score=47.20 Aligned_cols=52 Identities=10% Similarity=-0.037 Sum_probs=39.4
Q ss_pred EeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccCcC
Q psy2719 738 AKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 738 v~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~~ 806 (808)
..|. ..+|+.+++.+ +++ ++++|| |++|++.+| ++|+|++... .|+|+++++
T Consensus 134 ~~~~-~~~k~~~l~~l-------~~~---~~i~iGD~~~Di~~~~~ag---~~v~~~~~~~---~ad~v~~~~ 189 (201)
T 4ap9_A 134 IRLR-FRDKGEFLKRF-------RDG---FILAMGDGYADAKMFERAD---MGIAVGREIP---GADLLVKDL 189 (201)
T ss_dssp EECC-SSCHHHHHGGG-------TTS---CEEEEECTTCCHHHHHHCS---EEEEESSCCT---TCSEEESSH
T ss_pred CcCC-ccCHHHHHHhc-------CcC---cEEEEeCCHHHHHHHHhCC---ceEEECCCCc---cccEEEccH
Confidence 3443 67899997766 222 799999 999999995 4599997654 899998763
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=89.96 E-value=0.32 Score=48.52 Aligned_cols=60 Identities=13% Similarity=0.153 Sum_probs=44.5
Q ss_pred EeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCC---------Ccc--ccccccc
Q psy2719 738 AKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSS---------PTV--KSSWKQG 802 (808)
Q Consensus 738 v~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~---------~~v--k~~A~~~ 802 (808)
.... +-.|+.+++.++++ +|++++ ++++|| |++|.+.+| .+ ++|.+. +++ +..|+|+
T Consensus 164 ~~~~-~kp~~~~~~~~~~~-lgi~~~---~~~~iGD~~~Di~~a~~aG-~~--~~~~~~~~~~g~~~~~~~~~~~~~d~~ 235 (254)
T 3umg_A 164 INRK-YKPDPQAYLRTAQV-LGLHPG---EVMLAAAHNGDLEAAHATG-LA--TAFILRPVEHGPHQTDDLAPTGSWDIS 235 (254)
T ss_dssp HHTC-CTTSHHHHHHHHHH-TTCCGG---GEEEEESCHHHHHHHHHTT-CE--EEEECCTTTTCTTCCSCSSCSSCCSEE
T ss_pred cCCC-CCCCHHHHHHHHHH-cCCChH---HEEEEeCChHhHHHHHHCC-CE--EEEEecCCcCCCCccccccccCCCceE
Confidence 3444 56789999999997 899875 899999 999999995 43 555541 222 6778888
Q ss_pred cCc
Q psy2719 803 SNH 805 (808)
Q Consensus 803 ~~~ 805 (808)
+++
T Consensus 236 ~~~ 238 (254)
T 3umg_A 236 ATD 238 (254)
T ss_dssp ESS
T ss_pred ECC
Confidence 765
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=89.89 E-value=0.3 Score=53.01 Aligned_cols=88 Identities=10% Similarity=0.058 Sum_probs=54.0
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCC----Ccccc---CceEEECCCCHHH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAG----AGGMM---HEALLVNPYEIDA 463 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G----~~~~l---~~~llvnP~d~~~ 463 (808)
.+.+.+++.+ ++..||+||.- -|+| +..|||++++| +|+--+.+ .+..+ +-|+.+++.+ .
T Consensus 291 ~~~~~~p~~~---lL~~~~~~v~h---~G~~-s~~Eal~~GvP----~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~--~ 357 (400)
T 4amg_A 291 RVVEWIPLGA---LLETCDAIIHH---GGSG-TLLTALAAGVP----QCVIPHGSYQDTNRDVLTGLGIGFDAEAGS--L 357 (400)
T ss_dssp EEECCCCHHH---HHTTCSEEEEC---CCHH-HHHHHHHHTCC----EEECCC---CHHHHHHHHHHTSEEECCTTT--C
T ss_pred EEEeecCHHH---Hhhhhhheecc---CCcc-HHHHHHHhCCC----EEEecCcccHHHHHHHHHHCCCEEEcCCCC--c
Confidence 4567888765 47889998853 3554 77999999654 55543332 12222 2377776544 5
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHhHHHhcC
Q psy2719 464 AANVLHRALCMPRDERELRMSQLRHREQQL 493 (808)
Q Consensus 464 lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~ 493 (808)
++++|.++|+.+ +.+++.+++.+.+...
T Consensus 358 ~~~al~~lL~d~--~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 358 GAEQCRRLLDDA--GLREAALRVRQEMSEM 385 (400)
T ss_dssp SHHHHHHHHHCH--HHHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHcCH--HHHHHHHHHHHHHHcC
Confidence 789999999753 3445555555555444
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=89.80 E-value=0.26 Score=47.27 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccCcC
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~~ 806 (808)
..+++.++++ +|++++ ++++|| |++|++.+| .+ +++|++... .|+|++++.
T Consensus 143 ~~~~~~~~~~-~~i~~~---~~~~iGD~~nDi~~~~~aG-~~-~i~~~~~~~---~a~~v~~~~ 197 (207)
T 2go7_A 143 PEAATYLLDK-YQLNSD---NTYYIGDRTLDVEFAQNSG-IQ-SINFLESTY---EGNHRIQAL 197 (207)
T ss_dssp SHHHHHHHHH-HTCCGG---GEEEEESSHHHHHHHHHHT-CE-EEESSCCSC---TTEEECSST
T ss_pred cHHHHHHHHH-hCCCcc---cEEEECCCHHHHHHHHHCC-Ce-EEEEecCCC---CCCEEeCCH
Confidence 8899999987 899875 799999 999999995 32 478886432 688888764
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=89.54 E-value=0.29 Score=48.43 Aligned_cols=58 Identities=3% Similarity=-0.122 Sum_probs=45.5
Q ss_pred CCCHHHHHHHHHHHhcC-CCCCcceeEEEEe-----CHHHHHhccCCccEEEeCC---CCccccccccccCcC
Q psy2719 743 KWDQGRASIHILRTMYG-VDWSERVRIIYAG-----NEDAMLALQGIACTFRVDS---SPTVKSSWKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~-i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~~---~~~vk~~A~~~~~~~ 806 (808)
+-.|+.+++.++++ +| ++++ ++++|| |++|.+.+| .+ ++.|+. .+..+..|+|++++.
T Consensus 157 ~kp~~~~~~~~~~~-~g~~~~~---~~i~vGD~~~~Di~~a~~aG-~~-~i~~~~~~~~~~~~~~ad~v~~~~ 223 (238)
T 3ed5_A 157 QKPMKEYFNYVFER-IPQFSAE---HTLIIGDSLTADIKGGQLAG-LD-TCWMNPDMKPNVPEIIPTYEIRKL 223 (238)
T ss_dssp CTTCHHHHHHHHHT-STTCCGG---GEEEEESCTTTTHHHHHHTT-CE-EEEECTTCCCCTTCCCCSEEESSG
T ss_pred CCCChHHHHHHHHH-cCCCChh---HeEEECCCcHHHHHHHHHCC-CE-EEEECCCCCCCcccCCCCeEECCH
Confidence 56789999999996 89 8875 799999 899999996 32 355553 466788999998763
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=89.45 E-value=0.3 Score=48.19 Aligned_cols=54 Identities=11% Similarity=0.051 Sum_probs=42.5
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEe----CC-CCccccccccccCc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRV----DS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav----~~-~~~vk~~A~~~~~~ 805 (808)
.|..+++.++++ +|++++ ++++|| |+.|.+.+| +.+++ ++ .++++..|+|++++
T Consensus 156 p~~~~~~~~~~~-~~~~~~---~~~~vGD~~~Di~~a~~~G---~~~~~v~~~~~~~~~~~~~~~~v~~~ 218 (233)
T 3umb_A 156 TAPAAYALAPRA-FGVPAA---QILFVSSNGWDACGATWHG---FTTFWINRLGHPPEALDVAPAAAGHD 218 (233)
T ss_dssp TSHHHHTHHHHH-HTSCGG---GEEEEESCHHHHHHHHHHT---CEEEEECTTCCCCCSSSCCCSEEESS
T ss_pred cCHHHHHHHHHH-hCCCcc---cEEEEeCCHHHHHHHHHcC---CEEEEEcCCCCCchhccCCCCEEECC
Confidence 467788888886 899875 799999 999999985 33665 44 46788889999876
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=89.34 E-value=0.27 Score=48.57 Aligned_cols=52 Identities=15% Similarity=0.186 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCC---CccccccccccCc
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSS---PTVKSSWKQGSNH 805 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~---~~vk~~A~~~~~~ 805 (808)
.|..+++.++++ +|++ ++++|| |+.|.+.+| ++++++.. +..+..|+++..+
T Consensus 157 ~Kp~~~~~~~~~-~~~~-----~~~~vGDs~~Di~~a~~ag---~~i~~~~~~~~~~~~~~~~~~~~~ 215 (225)
T 1nnl_A 157 GKGKVIKLLKEK-FHFK-----KIIMIGDGATDMEACPPAD---AFIGFGGNVIRQQVKDNAKWYITD 215 (225)
T ss_dssp HHHHHHHHHHHH-HCCS-----CEEEEESSHHHHTTTTTSS---EEEEECSSCCCHHHHHHCSEEESC
T ss_pred chHHHHHHHHHH-cCCC-----cEEEEeCcHHhHHHHHhCC---eEEEecCccccHHHHhcCCeeecC
Confidence 677888888886 7762 699999 666666663 46777742 2234557776654
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=89.26 E-value=0.28 Score=48.49 Aligned_cols=14 Identities=29% Similarity=0.325 Sum_probs=12.0
Q ss_pred ceEEEEeccccccc
Q psy2719 543 KLSLILDYDGTLTP 556 (808)
Q Consensus 543 ~rli~~D~DGTLl~ 556 (808)
.++|+||+||||++
T Consensus 4 ~k~i~FDlDGTL~d 17 (233)
T 3umb_A 4 IRAVVFDAYGTLFD 17 (233)
T ss_dssp CCEEEECSBTTTEE
T ss_pred ceEEEEeCCCcccc
Confidence 46899999999987
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=89.05 E-value=0.27 Score=54.31 Aligned_cols=56 Identities=14% Similarity=0.219 Sum_probs=46.7
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~ 805 (808)
+-.|..+++.++++ +|++++ ++++|| |+.|++.+| +++++...+.+++.|++++.+
T Consensus 321 ~kpk~~~~~~~~~~-~gi~~~---~~i~vGD~~~Di~~a~~aG---~~va~~~~~~~~~~ad~~i~~ 380 (415)
T 3p96_A 321 RAGKATALREFAQR-AGVPMA---QTVAVGDGANDIDMLAAAG---LGIAFNAKPALREVADASLSH 380 (415)
T ss_dssp HHHHHHHHHHHHHH-HTCCGG---GEEEEECSGGGHHHHHHSS---EEEEESCCHHHHHHCSEEECS
T ss_pred CcchHHHHHHHHHH-cCcChh---hEEEEECCHHHHHHHHHCC---CeEEECCCHHHHHhCCEEEcc
Confidence 34788899999987 899875 799999 999999994 458886678899999998774
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=89.04 E-value=0.54 Score=47.43 Aligned_cols=35 Identities=6% Similarity=0.058 Sum_probs=28.4
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhcc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQ 781 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~ 781 (808)
+-.|..+++.++++ +|++++ ++++|| |+.|.+.+|
T Consensus 146 ~Kp~~~~~~~~~~~-~~~~~~---~~~~vGD~~~Di~~a~~aG 184 (253)
T 1qq5_A 146 FKPHPDSYALVEEV-LGVTPA---EVLFVSSNGFDVGGAKNFG 184 (253)
T ss_dssp CTTSHHHHHHHHHH-HCCCGG---GEEEEESCHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHH-cCCCHH---HEEEEeCChhhHHHHHHCC
Confidence 34677888888886 788875 799999 888999885
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=88.96 E-value=0.25 Score=47.80 Aligned_cols=44 Identities=23% Similarity=0.308 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccc
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVK 796 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk 796 (808)
..+++.++++ +|++++ ++++|| |+.|.+.+| .. ++.+...++++
T Consensus 151 ~~~~~~~~~~-~~~~~~---~~~~vgD~~~Di~~a~~aG-~~-~~~~~~~~~~~ 198 (206)
T 2b0c_A 151 ARIYQHVLQA-EGFSPS---DTVFFDDNADNIEGANQLG-IT-SILVKDKTTIP 198 (206)
T ss_dssp HHHHHHHHHH-HTCCGG---GEEEEESCHHHHHHHHTTT-CE-EEECCSTTHHH
T ss_pred HHHHHHHHHH-cCCCHH---HeEEeCCCHHHHHHHHHcC-Ce-EEEecCCchHH
Confidence 3467778886 788865 799999 777877774 22 23333444444
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=88.15 E-value=0.13 Score=49.46 Aligned_cols=29 Identities=21% Similarity=0.345 Sum_probs=20.9
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHH
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERL 577 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L 577 (808)
++|+||+||||++. ...+++.+.++++++
T Consensus 5 k~i~fDlDGTL~~~-----~~~~~~~~~~~~~~~ 33 (207)
T 2go7_A 5 TAFIWDLDGTLLDS-----YEAILSGIEETFAQF 33 (207)
T ss_dssp CEEEECTBTTTEEC-----HHHHHHHHHHHHHHH
T ss_pred cEEEEeCCCccccc-----HHHHHHHHHHHHHHc
Confidence 58999999999983 234455666666665
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=87.64 E-value=0.11 Score=50.92 Aligned_cols=44 Identities=16% Similarity=0.145 Sum_probs=27.5
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcC--CCCccccccccc
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM--PDVNIGIISGRT 592 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~--~~~~~~~~sgr~ 592 (808)
++|+||+||||++. ...+++...++++++... +...+...+||+
T Consensus 3 k~i~fDlDGTL~d~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~ 48 (221)
T 2wf7_A 3 KAVLFDLDGVITDT-----AEYHFRAWKALAEEIGINGVDRQFNEQLKGVS 48 (221)
T ss_dssp CEEEECCBTTTBTH-----HHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCC
T ss_pred cEEEECCCCcccCC-----hHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCC
Confidence 58999999999983 234556677777776432 112223456665
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=86.76 E-value=0.13 Score=49.27 Aligned_cols=49 Identities=12% Similarity=0.119 Sum_probs=35.3
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCcccccc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSW 799 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A 799 (808)
+..|+.+++.++++ +|++ ++++|| |++|++.+| .+ ++.+.+...+++.+
T Consensus 136 ~kp~~~~~~~~~~~-~~~~-----~~~~iGD~~~Di~~a~~aG-~~-~~~~~~~~~~~~~l 188 (190)
T 2fi1_A 136 RKPNPESMLYLREK-YQIS-----SGLVIGDRPIDIEAGQAAG-LD-THLFTSIVNLRQVL 188 (190)
T ss_dssp CTTSCHHHHHHHHH-TTCS-----SEEEEESSHHHHHHHHHTT-CE-EEECSCHHHHHHHH
T ss_pred CCCCHHHHHHHHHH-cCCC-----eEEEEcCCHHHHHHHHHcC-Ce-EEEECCCCChhhcc
Confidence 56789999999997 8887 489999 999999985 33 23343445555543
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=85.37 E-value=0.59 Score=44.98 Aligned_cols=57 Identities=14% Similarity=0.057 Sum_probs=43.9
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC--CCccccccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS--SPTVKSSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~--~~~vk~~A~~~~~~ 805 (808)
+-.|+.+++.++++ +|++++ ++++|| |+.|.+.+| .. ++.+.+ .+..+..|++++++
T Consensus 144 ~kp~~~~~~~~~~~-~~~~~~---~~~~iGD~~~Di~~a~~aG-~~-~~~~~~~~~~~~~~~a~~~~~~ 206 (214)
T 3e58_A 144 SKPNPEIYLTALKQ-LNVQAS---RALIIEDSEKGIAAGVAAD-VE-VWAIRDNEFGMDQSAAKGLLDS 206 (214)
T ss_dssp CTTSSHHHHHHHHH-HTCCGG---GEEEEECSHHHHHHHHHTT-CE-EEEECCSSSCCCCTTSSEEESS
T ss_pred CCCChHHHHHHHHH-cCCChH---HeEEEeccHhhHHHHHHCC-CE-EEEECCCCccchhccHHHHHHH
Confidence 45678899999997 899875 799999 999999996 32 345553 45566889998875
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=85.31 E-value=0.21 Score=49.19 Aligned_cols=30 Identities=23% Similarity=0.314 Sum_probs=19.7
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHH
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERL 577 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L 577 (808)
.++|+||+||||++.. ..+.+...++++++
T Consensus 4 ik~i~fDlDGTL~d~~-----~~~~~~~~~~~~~~ 33 (229)
T 2fdr_A 4 FDLIIFDCDGVLVDSE-----IIAAQVESRLLTEA 33 (229)
T ss_dssp CSEEEECSBTTTBCCH-----HHHHHHHHHHHHHT
T ss_pred ccEEEEcCCCCcCccH-----HHHHHHHHHHHHHh
Confidence 3689999999999832 23344455555554
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=84.50 E-value=0.25 Score=47.66 Aligned_cols=30 Identities=17% Similarity=0.418 Sum_probs=21.4
Q ss_pred HHHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 609 TKRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 609 ~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
+.+.|+.|.+ .|+.++|+|+.+...+...+
T Consensus 94 ~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l 123 (214)
T 3e58_A 94 VLKVLNEVKS-QGLEIGLASSSVKADIFRAL 123 (214)
T ss_dssp HHHHHHHHHH-TTCEEEEEESSCHHHHHHHH
T ss_pred HHHHHHHHHH-CCCCEEEEeCCcHHHHHHHH
Confidence 4566666654 37899999999877665554
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=83.99 E-value=0.77 Score=48.70 Aligned_cols=16 Identities=19% Similarity=0.212 Sum_probs=12.0
Q ss_pred CceEEEEecccccccC
Q psy2719 542 CKLSLILDYDGTLTPL 557 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~ 557 (808)
+.++++||+||||++.
T Consensus 107 ~~kaviFDlDGTLid~ 122 (317)
T 4eze_A 107 ANGIIAFDMDSTFIAE 122 (317)
T ss_dssp CSCEEEECTBTTTBSS
T ss_pred CCCEEEEcCCCCccCC
Confidence 4567888888888873
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.81 E-value=0.74 Score=45.20 Aligned_cols=30 Identities=7% Similarity=0.093 Sum_probs=21.1
Q ss_pred HHHHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 608 ETKRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 608 ~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
.+.+.|+.|.. ...++|+|.......+..+
T Consensus 72 gv~efL~~l~~--~~~i~I~Tss~~~~a~~vl 101 (195)
T 2hhl_A 72 HVDEFLQRMGQ--LFECVLFTASLAKYADPVA 101 (195)
T ss_dssp THHHHHHHHHH--HSEEEEECSSCHHHHHHHH
T ss_pred CHHHHHHHHHc--CCeEEEEcCCCHHHHHHHH
Confidence 35666666665 3789999988877665554
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=83.47 E-value=0.21 Score=50.19 Aligned_cols=31 Identities=19% Similarity=0.245 Sum_probs=20.5
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHH
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERL 577 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L 577 (808)
..++|+||+||||++.. ..+++.+.++++++
T Consensus 21 ~ik~i~fDlDGTL~d~~-----~~~~~~~~~~~~~~ 51 (254)
T 3umc_A 21 GMRAILFDVFGTLVDWR-----SSLIEQFQALEREL 51 (254)
T ss_dssp SCCEEEECCBTTTEEHH-----HHHHHHHHHHHHHS
T ss_pred CCcEEEEeCCCccEecC-----ccHHHHHHHHHHHh
Confidence 35799999999999732 23445555555544
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=83.39 E-value=0.24 Score=49.07 Aligned_cols=29 Identities=24% Similarity=0.312 Sum_probs=19.1
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHH
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERL 577 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L 577 (808)
++|+||+||||++. ...+.+...++++++
T Consensus 3 k~i~fDlDGTL~d~-----~~~~~~~~~~~~~~~ 31 (233)
T 3nas_A 3 KAVIFDLDGVITDT-----AEYHFLAWKHIAEQI 31 (233)
T ss_dssp CEEEECSBTTTBCH-----HHHHHHHHHHHHHHT
T ss_pred cEEEECCCCCcCCC-----HHHHHHHHHHHHHHc
Confidence 68999999999983 223344555555443
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=83.36 E-value=0.25 Score=48.91 Aligned_cols=30 Identities=20% Similarity=0.259 Sum_probs=19.5
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHH
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERL 577 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L 577 (808)
.++|+||+||||++.. ..+++...++++++
T Consensus 7 ~k~i~fDlDGTL~d~~-----~~~~~~~~~~~~~~ 36 (238)
T 3ed5_A 7 YRTLLFDVDDTILDFQ-----AAEALALRLLFEDQ 36 (238)
T ss_dssp CCEEEECCBTTTBCHH-----HHHHHHHHHHHHHT
T ss_pred CCEEEEcCcCcCcCCc-----hhHHHHHHHHHHHc
Confidence 4689999999999732 23344445555543
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=83.17 E-value=0.24 Score=49.48 Aligned_cols=30 Identities=13% Similarity=0.135 Sum_probs=20.0
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHH
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERL 577 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L 577 (808)
.++|+||+||||++.. ..+++.+.++++++
T Consensus 15 ~k~i~fDlDGTL~d~~-----~~~~~~~~~~~~~~ 44 (254)
T 3umg_A 15 VRAVLFDTFGTVVDWR-----TGIATAVADYAARH 44 (254)
T ss_dssp CCEEEECCBTTTBCHH-----HHHHHHHHHHHHHT
T ss_pred ceEEEEeCCCceecCc-----hHHHHHHHHHHHHh
Confidence 5799999999999832 23444555555543
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=82.55 E-value=0.91 Score=43.92 Aligned_cols=30 Identities=7% Similarity=0.096 Sum_probs=19.8
Q ss_pred HHHHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 608 ETKRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 608 ~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
.+.+.|+.+.. ...++|.|..........+
T Consensus 59 g~~efL~~l~~--~~~i~I~T~~~~~~a~~vl 88 (181)
T 2ght_A 59 HVDEFLQRMGE--LFECVLFTASLAKYADPVA 88 (181)
T ss_dssp THHHHHHHHHH--HSEEEEECSSCHHHHHHHH
T ss_pred CHHHHHHHHHh--CCCEEEEcCCCHHHHHHHH
Confidence 35556666655 3788888888876655544
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=82.12 E-value=1.8 Score=45.00 Aligned_cols=37 Identities=27% Similarity=0.361 Sum_probs=24.7
Q ss_pred eEEEEecccccccCCCCC-------CccCCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTSHP-------DLAVMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~-------~~~~i~~~~~~~L~~L~~~ 580 (808)
+.+++|+|||+....... ....+-+.+.++|+.|+++
T Consensus 160 ~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~ 203 (301)
T 1ltq_A 160 KAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALM 203 (301)
T ss_dssp EEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHT
T ss_pred ceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHHC
Confidence 578899999997743321 0112357788888888776
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.97 E-value=0.31 Score=48.98 Aligned_cols=31 Identities=3% Similarity=0.127 Sum_probs=20.2
Q ss_pred HHHHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 608 ETKRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 608 ~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
.+++.|+.|.+ .|+.++|+|+.....+...+
T Consensus 116 ~~~~~l~~l~~-~g~~~~i~sn~~~~~~~~~l 146 (250)
T 3l5k_A 116 GAEKLIIHLRK-HGIPFALATSSRSASFDMKT 146 (250)
T ss_dssp THHHHHHHHHH-TTCCEEEECSCCHHHHHHHT
T ss_pred CHHHHHHHHHh-CCCcEEEEeCCCHHHHHHHH
Confidence 34556666654 37888999988766555433
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=81.97 E-value=0.32 Score=47.89 Aligned_cols=30 Identities=13% Similarity=0.204 Sum_probs=19.9
Q ss_pred HHHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 609 TKRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 609 ~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
+.+.|+.|.+ .|+.++|+|+.....+...+
T Consensus 96 ~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l 125 (233)
T 3s6j_A 96 AVELLETLDK-ENLKWCIATSGGIDTATINL 125 (233)
T ss_dssp HHHHHHHHHH-TTCCEEEECSSCHHHHHHHH
T ss_pred HHHHHHHHHH-CCCeEEEEeCCchhhHHHHH
Confidence 4455665544 37888888888776665554
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=81.71 E-value=0.34 Score=48.39 Aligned_cols=57 Identities=9% Similarity=0.021 Sum_probs=39.2
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEeC--CC-Cccc---cccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRVD--SS-PTVK---SSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~--~~-~~vk---~~A~~~~~~ 805 (808)
+-.|..+++.++++ +|++++ ++++|| |+.|.+.+| .. ++.+. .. ++.. ..|++++++
T Consensus 149 ~Kp~~~~~~~~~~~-~g~~~~---~~i~iGD~~~~Di~~a~~aG-~~-~~~v~~g~~~~~~~~~~~~~~~~i~~ 216 (241)
T 2hoq_A 149 KKPHPKIFKKALKA-FNVKPE---EALMVGDRLYSDIYGAKRVG-MK-TVWFRYGKHSERELEYRKYADYEIDN 216 (241)
T ss_dssp CTTCHHHHHHHHHH-HTCCGG---GEEEEESCTTTTHHHHHHTT-CE-EEEECCSCCCHHHHTTGGGCSEEESS
T ss_pred CCCCHHHHHHHHHH-cCCCcc---cEEEECCCchHhHHHHHHCC-CE-EEEECCCCCCcccccccCCCCEEECC
Confidence 45677899999987 899875 799999 888999986 32 23343 21 2222 267777664
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=81.48 E-value=0.4 Score=46.98 Aligned_cols=60 Identities=7% Similarity=-0.137 Sum_probs=43.9
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCC--Cccc-cccccccCcC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSS--PTVK-SSWKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~--~~vk-~~A~~~~~~~ 806 (808)
+-.|..+.+.++++ +|++++ ++++|| |+.|.+++|-..+.|++++. ++++ ..|++++++.
T Consensus 136 ~Kp~p~~~~~~~~~-lg~~p~---~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~ 202 (210)
T 2ah5_A 136 APHKADVIHQALQT-HQLAPE---QAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKP 202 (210)
T ss_dssp CCSHHHHHHHHHHH-TTCCGG---GEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESST
T ss_pred CCCChHHHHHHHHH-cCCCcc---cEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCH
Confidence 56899999999997 899875 799999 89999999622323444432 3454 3688887753
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=81.27 E-value=0.3 Score=48.22 Aligned_cols=28 Identities=39% Similarity=0.390 Sum_probs=17.9
Q ss_pred HHHHHHHHhCCCCCeEEEEeCCChhhHHHh
Q psy2719 609 TKRVLERLANMPDVNIGIISGRTLENLMKM 638 (808)
Q Consensus 609 ~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~ 638 (808)
+++.|+.|. .|..++|+|+.+...+...
T Consensus 112 ~~~~l~~l~--~g~~~~i~sn~~~~~~~~~ 139 (240)
T 3qnm_A 112 AKEVLEYLA--PQYNLYILSNGFRELQSRK 139 (240)
T ss_dssp HHHHHHHHT--TTSEEEEEECSCHHHHHHH
T ss_pred HHHHHHHHH--cCCeEEEEeCCchHHHHHH
Confidence 455666665 4778888887766555443
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=81.05 E-value=0.3 Score=47.53 Aligned_cols=31 Identities=16% Similarity=0.367 Sum_probs=20.3
Q ss_pred HHHHHHHHHhCCCCCeEEEEeCCChhhHHHhcC
Q psy2719 608 ETKRVLERLANMPDVNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 608 ~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~~ 640 (808)
.+.+.|+.|.+ . ++++|+|+.+...+...+.
T Consensus 87 ~~~~~l~~l~~-~-~~~~i~s~~~~~~~~~~l~ 117 (209)
T 2hdo_A 87 GITSLFEQLPS-E-LRLGIVTSQRRNELESGMR 117 (209)
T ss_dssp THHHHHHHSCT-T-SEEEEECSSCHHHHHHHHT
T ss_pred CHHHHHHHHHh-c-CcEEEEeCCCHHHHHHHHH
Confidence 34556666544 3 7888888887766665554
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=80.37 E-value=0.65 Score=51.15 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 607 EETKRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 607 ~~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
+.+++.|+.|.+ .|++++|+||.....+...+
T Consensus 259 pg~~e~l~~Lk~-~G~~~~ivS~~~~~~~~~~~ 290 (415)
T 3p96_A 259 PGARTTLRTLRR-LGYACGVVSGGFRRIIEPLA 290 (415)
T ss_dssp TTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHH
T ss_pred ccHHHHHHHHHH-CCCEEEEEcCCcHHHHHHHH
Confidence 345667777755 48999999998776655544
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=80.10 E-value=0.35 Score=47.67 Aligned_cols=55 Identities=11% Similarity=-0.043 Sum_probs=39.0
Q ss_pred CCCHH---HHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEeCC------------CCccccccccc
Q psy2719 743 KWDQG---RASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRVDS------------SPTVKSSWKQG 802 (808)
Q Consensus 743 ~v~KG---~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~~------------~~~vk~~A~~~ 802 (808)
.-++. .+++. +++ +|++++ ++++|| |+.|.+.+| . .++|.+ .+..+..|+|+
T Consensus 152 KP~~~~~~~~l~~-~~~-lgi~~~---~~~~vGD~~~~Di~~a~~aG-~--~~~~~~~~~~~~g~g~~~~~~~~~~ad~v 223 (240)
T 3smv_A 152 KPNPNNFTYMIDA-LAK-AGIEKK---DILHTAESLYHDHIPANDAG-L--VSAWIYRRHGKEGYGATHVPSRMPNVDFR 223 (240)
T ss_dssp TTSHHHHHHHHHH-HHH-TTCCGG---GEEEEESCTTTTHHHHHHHT-C--EEEEECTTCC-------CCCSSCCCCSEE
T ss_pred CCCHHHHHHHHHH-HHh-cCCCch---hEEEECCCchhhhHHHHHcC-C--eEEEEcCCCcccCCCCCCCCcCCCCCCEE
Confidence 44666 56665 776 899875 799999 888999985 3 355532 13455889999
Q ss_pred cCc
Q psy2719 803 SNH 805 (808)
Q Consensus 803 ~~~ 805 (808)
+++
T Consensus 224 ~~~ 226 (240)
T 3smv_A 224 FNS 226 (240)
T ss_dssp ESS
T ss_pred eCC
Confidence 876
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 808 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 8e-83 | |
| d1u02a_ | 229 | c.108.1.15 (A:) Trehalose-6-phosphate phosphatase | 2e-17 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 0.002 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 270 bits (690), Expect = 8e-83
Identities = 139/448 (31%), Positives = 205/448 (45%), Gaps = 65/448 (14%)
Query: 100 MNGVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYY 159
+ G G+W GWSG + N ++ + + + YY
Sbjct: 27 ILGALKAAGGLWFGWSGETGNEDQPLKKVKKGN----------ITWASFNLSEQDLDEYY 76
Query: 160 NGCCNGTFWPLFHSMPDRAVFNAETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVV 219
N N WP FH D F W Y +VN A+ L +++D D
Sbjct: 77 NQFSNAVLWPAFHYRLDLVQFQRPAWDGYLRVNALLAD----KLLPLLQDDD-------- 124
Query: 220 PVVWIHDYQLLVAATTIRQ----------------------------------VAYDFVG 245
++WIHDY LL A +R+ YD +G
Sbjct: 125 -IIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLG 183
Query: 246 FHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENAPEN 305
F E+ L F+DC R+ G+ + PIGI + + A
Sbjct: 184 FQTENDRLAFLDCLSNLTRVTT-RSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPP 242
Query: 306 ------LKDENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTD 359
+ +N++ I V+RLDY+KGL R A+E LLEK+P++ K+ + QI+ SR D
Sbjct: 243 KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGD 302
Query: 360 VLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDG 419
V Y+ ++ +++ GRING++ + W+P+ Y+ ++ L ++R S + LVTPLRDG
Sbjct: 303 VQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDG 362
Query: 420 MNLVAKEYVACQI-REPGVLILSPFAGAGGMMHEALLVNPYEIDAAANVLHRALCMPRDE 478
MNLVAKEYVA Q PGVL+LS FAGA + AL+VNPY+ D A L RAL M E
Sbjct: 363 MNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAE 422
Query: 479 RELRMSQLRHREQQLDVNHWMNSFLSSM 506
R R +++ + D+NHW F+S +
Sbjct: 423 RISRHAEMLDVIVKNDINHWQECFISDL 450
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 80.0 bits (196), Expect = 2e-17
Identities = 38/249 (15%), Positives = 69/249 (27%), Gaps = 49/249 (19%)
Query: 546 LILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVM 605
+ LDYDGTL P+ +P+ + ++ L D I++GR+ E + L +
Sbjct: 3 IFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDT--YIVTGRSPEEISRFLPLDIN 60
Query: 606 SEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVHP 665
HG + +
Sbjct: 61 ----------------------------------------MICYHGACSKINGQIVYNNG 80
Query: 666 VPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIFLEA 725
+ R G I K + + +H + + + R +I
Sbjct: 81 SDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIF 140
Query: 726 GFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAGNEDAMLALQGIAC 785
G E + M IE + P ++G A + + ++A A
Sbjct: 141 GVETYYGKMIIELRVP-GVNKGSAIRSVR------GERPAIIAGDDATDEAAFEANDDAL 193
Query: 786 TFRVDSSPT 794
T +V T
Sbjct: 194 TIKVGEGET 202
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 38.4 bits (88), Expect = 0.002
Identities = 42/251 (16%), Positives = 72/251 (28%), Gaps = 19/251 (7%)
Query: 546 LILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVM 605
L D DGTL + + T LE + I I +GR + + +L
Sbjct: 4 LFFDIDGTLV----SFETHRIPSSTIEALEAAHAK-GLKIFIATGRPKAIINNLSELQDR 58
Query: 606 SEETKRVLERLANMPDVNIGIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVHP 665
+ + A I + +K + + G+ + +
Sbjct: 59 NLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAA----FCEKKGVPCIFVEEHNISVC 114
Query: 666 VPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFHYRETPIERREYIIDRASQIFLEA 725
P E +K+ + NK V + TP E + I
Sbjct: 115 QPNEMVKKIFYDFLHVNVIPTVSFEEASNKEV-----IQMTPFITEEEEKEVLPSIPTCE 169
Query: 726 GFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAGNEDAMLALQGIAC 785
+ A + AK K I + +G+ E + GN+ +ML I
Sbjct: 170 IGRWYPAFADVTAKGDTKQ----KGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGV 225
Query: 786 TFRVDSSPTVK 796
+ VK
Sbjct: 226 AMG-QAKEDVK 235
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 808 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.92 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.89 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.89 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.88 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.88 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.88 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.88 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.87 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.85 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.85 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.84 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.82 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.81 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.78 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.74 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.74 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.73 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.73 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.7 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.67 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.79 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.68 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.28 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 97.19 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.86 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 96.59 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.26 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.89 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 95.81 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 95.64 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 95.48 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 95.01 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 94.82 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 94.24 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 93.84 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 93.52 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 93.47 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 93.09 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 92.18 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 91.66 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 91.55 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 90.86 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 90.73 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 90.13 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 88.82 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 87.42 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 86.18 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 85.08 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 84.64 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 84.43 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 81.63 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 81.5 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 80.82 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.5e-77 Score=679.00 Aligned_cols=385 Identities=36% Similarity=0.641 Sum_probs=349.2
Q ss_pred ccccccceeeeecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCcEEeecCCHHHHhHHHHhhhHhhhhhhccCCCCccccC
Q psy2719 102 GVTLEITGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFHSMPDRAVFN 181 (808)
Q Consensus 102 g~~~~~~~~wigw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~ 181 (808)
++.++.+|+||||+|..... .++ .......+++|.||+|+++++++||+||||++|||+|||+++...|+
T Consensus 29 ~~~~~~~g~Wvgw~g~~~~~-------~~~---~~~~~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWpl~H~~~~~~~~~ 98 (456)
T d1uqta_ 29 GALKAAGGLWFGWSGETGNE-------DQP---LKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQ 98 (456)
T ss_dssp HHHHHHCEEEEEEEEEESCC-------SSC---CEEEEETTEEEEEEEECHHHHHHHTTTHHHHTHHHHHTTCGGGCCCC
T ss_pred HHHhhCCCEEEecCCCCCcc-------cch---hhhhhccCceeEEecCCHHHHHHHHHHhhhccccccccCcccccccc
Confidence 44567899999999975321 111 11223456899999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCCCEEEEeccchHHHHHHHHhhc---------------------
Q psy2719 182 AETWKTYCKVNEEFANCTLNALRNVIKDLDAAGKTNVVPVVWIHDYQLLVAATTIRQVA--------------------- 240 (808)
Q Consensus 182 ~~~w~~Y~~vN~~fa~~i~~~~~~~~~~~~~~~~~~~~dvvwihDyhl~llp~~lr~~~--------------------- 240 (808)
+++|++|++||+.||++|++.++ ++|+||||||||+++|.+||++.
T Consensus 99 ~~~~~~Y~~vN~~fA~~l~~~~~-------------~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~~~fr~ 165 (456)
T d1uqta_ 99 RPAWDGYLRVNALLADKLLPLLQ-------------DDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNA 165 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCC-------------TTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-------------CCCeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCChHHhcc
Confidence 99999999999999999988764 48999999999999999999877
Q ss_pred -------------CCEEEeccHHHHHHHHHHHHHHhCceeecCCeEEEEcCeEEEEEEeecCcCccccchhhcCc--h--
Q psy2719 241 -------------YDFVGFHIEDYCLNFIDCCCRRLGSRVDRNNMLVELAGRTVHVKALPIGIPFERFVQLAENA--P-- 303 (808)
Q Consensus 241 -------------~dligf~~~~~~~~fl~~~~~~l~~~~~~~~~~i~~~gr~~~v~v~p~GID~~~f~~~~~~~--~-- 303 (808)
+|+||||+.+|++||+.+|.++++.+..... .+.+.|+.+++.++|+|||++.|.+..... .
T Consensus 166 lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~-~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~ 244 (456)
T d1uqta_ 166 LPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK-SHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKL 244 (456)
T ss_dssp STTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT-EEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHH
T ss_pred CcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCC-eEEecCceeeeeeecCcccchhhhhhcccHHHHHH
Confidence 8999999999999999999999998765554 478899999999999999999997643321 1
Q ss_pred -hhhhc-CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccC
Q psy2719 304 -ENLKD-ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRF 381 (808)
Q Consensus 304 -~~~~~-~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~ 381 (808)
+.++. +++++|++|||+++.||++.+|+||++|++++|+++++++|+|++.|++++.++|.+++.++.+++++||++|
T Consensus 245 ~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~ 324 (456)
T d1uqta_ 245 AQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKY 324 (456)
T ss_dssp HHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhh
Confidence 12222 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccC-CCceEEEcCCCCCccccCceEEECCCC
Q psy2719 382 SKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIR-EPGVLILSPFAGAGGMMHEALLVNPYE 460 (808)
Q Consensus 382 g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~-~~g~vVlS~~~G~~~~l~~~llvnP~d 460 (808)
++.+|.|++++.+.++++++.++|+.||++++||++||||||++|||||+.| .+|+||+|+++|+++++.+|++|||+|
T Consensus 325 ~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~~g~lVnP~d 404 (456)
T d1uqta_ 325 GQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYD 404 (456)
T ss_dssp CBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCTTSEEECTTC
T ss_pred ccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHhCCeEEECcCC
Confidence 9999999999999999999999999999999999999999999999999987 479999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHHccc
Q psy2719 461 IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMGALD 510 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 510 (808)
++++|+||.++|+||++||++|+++++++|.+||+.+|+++||++|+++.
T Consensus 405 ~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 454 (456)
T d1uqta_ 405 RDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 454 (456)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999863
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.92 E-value=8.3e-25 Score=221.61 Aligned_cols=203 Identities=20% Similarity=0.246 Sum_probs=160.3
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
|||||+||||+++..+|+...++++++++|++|++ ++.|
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~-----------------------------------------~~~v 40 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKE-----------------------------------------RFDT 40 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHH-----------------------------------------HSEE
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHHhh-----------------------------------------CCCE
Confidence 79999999999988777788899999999999975 4679
Q ss_pred EEEeCCChhhHHHhcCccceEEEcccceeEecCCCceeecCC--ChhHHHHHHHHHHHHHhhccCCCcEEEecCcEEEEE
Q psy2719 625 GIISGRTLENLMKMVNIEKVTYAGSHGLEILHPDGTKFVHPV--PKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLTFH 702 (808)
Q Consensus 625 ~I~SGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~~~--~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~~~~ 702 (808)
+|+|||+...+...+.. ..+++++||+.+..++...+.... ..+|.+.+.+.+..+... .++...+.+...+.++
T Consensus 41 ~i~TGR~~~~l~~~~~~-~~~~~~~ng~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~ 117 (229)
T d1u02a_ 41 YIVTGRSPEEISRFLPL-DINMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVSD--FPGLRIYRKNLAVLYH 117 (229)
T ss_dssp EEECSSCHHHHHHHSCS-SCEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHHHH--STTCEEEEETTEEEEE
T ss_pred EEEcCCCHHHhhhhcCc-cccEEecCeEEEecCCceeeecchhhhHHHHHHHHHHhHHhhcc--cCCceecccccceeee
Confidence 99999999999887764 357899999998876544333222 223434444444444333 7889999999999999
Q ss_pred cCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHH
Q psy2719 703 YRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAML 778 (808)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~ 778 (808)
+........++..+.+.+.+...++.+.++..++||.|+ |+|||.|++.|+++ .+++||| |++||+
T Consensus 118 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~idi~p~-g~~Kg~al~~l~~~---------~~~i~~GDs~ND~~Mf~ 187 (229)
T d1u02a_ 118 LGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVP-GVNKGSAIRSVRGE---------RPAIIAGDDATDEAAFE 187 (229)
T ss_dssp CTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECT-TCCHHHHHHHHHTT---------SCEEEEESSHHHHHHHH
T ss_pred ehhhhhhhHHHHHHHHHHHhhcCCeEEEeeceEEEEecC-CCCHHHHHHHHhcc---------ccceeecCCCChHHHHh
Confidence 987765555556667777777778888999999999998 99999999999864 1699999 999999
Q ss_pred hccCCccEEEeCCCCccccccccccCc
Q psy2719 779 ALQGIACTFRVDSSPTVKSSWKQGSNH 805 (808)
Q Consensus 779 ~~~~~~~~vav~~~~~vk~~A~~~~~~ 805 (808)
.++ .|++|+||+. ++.|+|++++
T Consensus 188 ~~~-~~~av~~g~~---~~~A~~~~~~ 210 (229)
T d1u02a_ 188 AND-DALTIKVGEG---ETHAKFHVAD 210 (229)
T ss_dssp TTT-TSEEEEESSS---CCCCSEEESS
T ss_pred ccC-CeEEEEeCCC---CccCeEEcCC
Confidence 997 5878888875 4789999875
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=2e-22 Score=210.17 Aligned_cols=208 Identities=13% Similarity=0.205 Sum_probs=139.2
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
||||+|+||||++... ..++++++++|++|+++ |+.
T Consensus 3 Kli~~DlDGTLl~~~~----~~~~~~~~~~l~~l~~~----------------------------------------gi~ 38 (269)
T d1rlma_ 3 KVIVTDMDGTFLNDAK----TYNQPRFMAQYQELKKR----------------------------------------GIK 38 (269)
T ss_dssp CEEEECCCCCCSCTTS----CCCHHHHHHHHHHHHHH----------------------------------------TCE
T ss_pred EEEEEeCCccCcCCCC----cCChHHHHHHHHHHHHC----------------------------------------CCE
Confidence 6899999999998322 23457899999999887 999
Q ss_pred EEEEeCCChhhHHHhcCc--cceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhc-------cCCCcEEEe
Q psy2719 624 IGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEV-------CHDGAWIEN 694 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-------~~~g~~ie~ 694 (808)
|+++|||+...+.+++.. ...+++++||+.+..+++..+...+..+ ....++..+.... ...+.++..
T Consensus 39 ~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 115 (269)
T d1rlma_ 39 FVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRH---ESRIVIGELLKDKQLNFVACGLQSAYVSE 115 (269)
T ss_dssp EEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCCHH---HHHHHHHHHHTCTTCEEEEEESSCEEEET
T ss_pred EEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEEEEeccchH---HHHHHHHHHHhhcCceEEEEecCceEEec
Confidence 999999999999888863 3458999999999987655555555443 2223333222210 112222221
Q ss_pred cCc--------------EEEEEcCc-----------CChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHH
Q psy2719 695 KGV--------------LLTFHYRE-----------TPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRA 749 (808)
Q Consensus 695 k~~--------------~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~a 749 (808)
... .....+.. .+++......+++..........+.++..++||.|+ ++|||.|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~p~-~~sK~~a 194 (269)
T d1rlma_ 116 NAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIP-GLHKANG 194 (269)
T ss_dssp TSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECT-TCSHHHH
T ss_pred CCcHHHHHHHHhhcccccccccHhhhcchheEEEecCCHHHHHHHHHHHHHHhhcceEEEEEcCceEEEecC-chHHHHH
Confidence 100 00000110 111112222233222222112235678899999998 9999999
Q ss_pred HHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 750 SIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 750 v~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+++|+++ +|++.+ ++++|| |++||+.+ |.+|+|+| .+++|+.|+||++++
T Consensus 195 l~~l~~~-lgi~~~---~vi~~GD~~ND~~Ml~~a---g~~vam~Na~~~lk~~A~~v~~~~ 249 (269)
T d1rlma_ 195 ISRLLKR-WDLSPQ---NVVAIGDSGNDAEMLKMA---RYSFAMGNAAENIKQIARYATDDN 249 (269)
T ss_dssp HHHHHHH-HTCCGG---GEEEEECSGGGHHHHHHC---SEEEECTTCCHHHHHHCSEECCCG
T ss_pred HHHHhhh-hccccc---cEEEEcCCcchHHHHHhC---CeEEEeCCCCHHHHHhCCEEcCCC
Confidence 9999997 899875 799999 99999998 45699997 588999999999875
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.89 E-value=2.3e-22 Score=227.82 Aligned_cols=201 Identities=8% Similarity=0.098 Sum_probs=145.6
Q ss_pred EEEEEEeecCcCccccchhhcCc-----------------hhhhhc-----CCCeEEEEEcCccccCChHHHHHHHHHHH
Q psy2719 280 TVHVKALPIGIPFERFVQLAENA-----------------PENLKD-----ENLKVILGVDRLDYTKGLVHRIKAFERLL 337 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~-----------------~~~~~~-----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll 337 (808)
..++.++|||+|.+.|.|..... ...+.. ++.++|+++||+++.||++.+++|+++++
T Consensus 238 ~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~ 317 (477)
T d1rzua_ 238 AHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIV 317 (477)
T ss_dssp GGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHH
T ss_pred cccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHH
Confidence 45688899999999887632110 001111 45689999999999999999999999998
Q ss_pred HhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCC
Q psy2719 338 EKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLR 417 (808)
Q Consensus 338 ~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~ 417 (808)
++++ .|+++|.+ +.. ...++.++..+++. .+. +.+..+.+++..+|+.||+||+||.+
T Consensus 318 ~~~~------~l~~~G~G---~~~----~~~~~~~~~~~~~~--------~v~-~~~~~~~~~~~~~~~~aD~~v~PS~~ 375 (477)
T d1rzua_ 318 SLGG------RLVVLGAG---DVA----LEGALLAAASRHHG--------RVG-VAIGYNEPLSHLMQAGCDAIIIPSRF 375 (477)
T ss_dssp HTTC------EEEEEECB---CHH----HHHHHHHHHHHTTT--------TEE-EEESCCHHHHHHHHHHCSEEEECCSC
T ss_pred hhCC------eEEEEecC---Cch----HHHHHHHHHhhcCC--------eEE-EEcccChhHHHHHHHhCccccCCccc
Confidence 7643 35656643 222 22333444444432 243 45677888999999999999999999
Q ss_pred CCCChhHHHHHHhccCCCceEEEcCCCCCccccC------------ceEEECCCCHHHHHHHHHHHhCC--CHHHHHHHH
Q psy2719 418 DGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH------------EALLVNPYEIDAAANVLHRALCM--PRDERELRM 483 (808)
Q Consensus 418 EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~------------~~llvnP~d~~~lA~ai~~~L~~--~~~e~~~r~ 483 (808)
||||+|++|||||+ .|+|+|+.+|..+.+. +|++|+|.|++++|++|.++|+. .++.++++.
T Consensus 376 E~fglv~lEAma~G----~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~ 451 (477)
T d1rzua_ 376 EPCGLTQLYALRYG----CIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQ 451 (477)
T ss_dssp CSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred cCCCHHHHHHHHcC----CCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHH
Confidence 99999999999995 6799999999888773 58999999999999999998863 333443333
Q ss_pred HHHhHHHhcCCHHHHHHHHHHHHHc
Q psy2719 484 SQLRHREQQLDVNHWMNSFLSSMGA 508 (808)
Q Consensus 484 ~~~~~~v~~~~~~~W~~~~l~~l~~ 508 (808)
+++. .+.++|+.-++++++..++
T Consensus 452 ~~a~--~~~fsw~~~a~~~~~lY~~ 474 (477)
T d1rzua_ 452 KLGM--KSDVSWEKSAGLYAALYSQ 474 (477)
T ss_dssp HHHH--TCCCBHHHHHHHHHHHHHH
T ss_pred HHHH--HhhCCHHHHHHHHHHHHHH
Confidence 3222 2458888888887765554
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.88 E-value=2.6e-22 Score=209.59 Aligned_cols=206 Identities=18% Similarity=0.214 Sum_probs=141.0
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
|||+||+||||++ +.+.++++++++|++|++. +.
T Consensus 3 Kli~~DlDGTL~~-----~~~~i~~~~~~al~~l~~~-----------------------------------------~~ 36 (267)
T d1nf2a_ 3 RVFVFDLDGTLLN-----DNLEISEKDRRNIEKLSRK-----------------------------------------CY 36 (267)
T ss_dssp CEEEEECCCCCSC-----TTSCCCHHHHHHHHHHTTT-----------------------------------------SE
T ss_pred EEEEEeCCccccC-----CcCccCHHHHHHHHHHHcC-----------------------------------------CE
Confidence 5899999999998 3457999999999998754 57
Q ss_pred EEEEeCCChhhHHHhcC---ccceEEEcccceeEecCCCc-eeecCCChhHHHHHHHHHHHHHhhc-----cC-CCcEEE
Q psy2719 624 IGIISGRTLENLMKMVN---IEKVTYAGSHGLEILHPDGT-KFVHPVPKEYAEKLRQLIKALQDEV-----CH-DGAWIE 693 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~---~~~~~li~~nG~~i~~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~~-----~~-~g~~ie 693 (808)
++++|||++..+.+.+. ..+.++|++||+.|+.+++. .+..+++.+ .+.++++.+.+.. .+ .+.+.+
T Consensus 37 ~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~i~~~~i~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~ 113 (267)
T d1nf2a_ 37 VVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPE---VAKDIIEYIKPLNVHWQAYIDDVLYSE 113 (267)
T ss_dssp EEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEEECCBCHH---HHHHHHHHHGGGCCCEEEECSSCEEES
T ss_pred EEEECCCChHHHHHHHHHhcccCCceeccCCeEEEecccccccccCCCHH---HHHHHHHHHHhcCceEEEeeCceEEec
Confidence 99999999888776653 34457899999999987655 455677765 4556666655531 01 111111
Q ss_pred ecCcEEE-------EEcCcCCh--hh-------------HHHHHHHHHHHHHh-c--CeeE-EccCeEEEEeCCCCCCHH
Q psy2719 694 NKGVLLT-------FHYRETPI--ER-------------REYIIDRASQIFLE-A--GFEP-HNALMAIEAKPPVKWDQG 747 (808)
Q Consensus 694 ~k~~~~~-------~~~~~~~~--~~-------------~~~~~~~~~~~~~~-~--~~~v-~~g~~~vEv~p~~~v~KG 747 (808)
.....+. ..++..+. +. .++.++++.+.+.. + .+.+ .++..++||.|+ ++|||
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~di~~~-~~~K~ 192 (267)
T d1nf2a_ 114 KDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPK-NVDKG 192 (267)
T ss_dssp SCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECT-TCCHH
T ss_pred CCcHHHHHHHHhcCCCceecCcHHHHhhhccceEEEEeccHHHHHHHHHHHHHhhCCcEEEEEeecceeeecCC-CCchh
Confidence 1000000 00000000 00 01222333333322 2 2444 578899999998 99999
Q ss_pred HHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 748 RASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 748 ~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
.|++.|+++ +|++.+ +++||| |++||+.+ |++|+|+| .+++|+.|+|+++++
T Consensus 193 ~ai~~l~~~-~~i~~~---~vva~GD~~ND~~ml~~~---~~sva~~na~~~~k~~A~~i~~~~ 249 (267)
T d1nf2a_ 193 KALRFLRER-MNWKKE---EIVVFGDNENDLFMFEEA---GLRVAMENAIEKVKEASDIVTLTN 249 (267)
T ss_dssp HHHHHHHHH-HTCCGG---GEEEEECSHHHHHHHTTC---SEEEECTTSCHHHHHHCSEECCCT
T ss_pred HHHHHHHHh-hccCcc---cEEEEcCCcchHHHHHhC---CcEEEeCCCCHHHHHhCCEEcCCC
Confidence 999999997 899875 799999 99999998 45699997 588999999999876
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.88 E-value=4.3e-23 Score=214.68 Aligned_cols=207 Identities=13% Similarity=0.160 Sum_probs=142.7
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
|+||||+||||++. +...+|++++++|++|++. |+.
T Consensus 2 k~if~DlDGTL~~~----~~~~i~~~~~~al~~l~~~----------------------------------------gi~ 37 (260)
T d2rbka1 2 KALFFDIDGTLVSF----ETHRIPSSTIEALEAAHAK----------------------------------------GLK 37 (260)
T ss_dssp CEEEECSBTTTBCT----TTSSCCHHHHHHHHHHHHT----------------------------------------TCE
T ss_pred eEEEEECCCCCcCC----CCCCCCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 68999999999974 3357899999999999998 999
Q ss_pred EEEEeCCChhhHHHhc---Cc-cceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEecCcEE
Q psy2719 624 IGIISGRTLENLMKMV---NI-EKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLL 699 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~---~~-~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~ 699 (808)
|+++|||++..+...+ +. ...++|++||++++.+++..+...++.+ .++++++.+.+. ...-.+........
T Consensus 38 v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~~~i~~~~l~~~---~~~~i~~~~~~~-~~~~~~~~~~~~~~ 113 (260)
T d2rbka1 38 IFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEEVIYKSAIPQE---EVKAMAAFCEKK-GVPCIFVEEHNISV 113 (260)
T ss_dssp EEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETTEEEEECCCCHH---HHHHHHHHHHHH-TCCEEEECSSCEEE
T ss_pred EEEECCCCHHHHHHHHHHHhcCCCCceEecCCcccccCcccccccCCCHH---HHHHHHHHHHHc-CCcEEEEecCceee
Confidence 9999999988765432 22 2357899999999988766677788876 355555555443 11111111111111
Q ss_pred EEE----------cC---cCCh-hhHHH------------HHHHHHHHHHhc-CeeE-EccCeEEEEeCCCCCCHHHHHH
Q psy2719 700 TFH----------YR---ETPI-ERREY------------IIDRASQIFLEA-GFEP-HNALMAIEAKPPVKWDQGRASI 751 (808)
Q Consensus 700 ~~~----------~~---~~~~-~~~~~------------~~~~~~~~~~~~-~~~v-~~g~~~vEv~p~~~v~KG~av~ 751 (808)
... +. ..+. .+.+. ..+...+++... .+.+ .++..++||.|+ ++|||.|++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~p~-~~sK~~al~ 192 (260)
T d2rbka1 114 CQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAFADVTAK-GDTKQKGID 192 (260)
T ss_dssp ESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHHHHHHHGGGSTTCEEECSSTTCCEEEST-TCSHHHHHH
T ss_pred ccchHHHHHHHHHhhccCcCcccCHhHhcCcceEEEeecCCHHHHHHHHHHhccccceeecCcEEEEEeC-CCCHHHHHH
Confidence 000 00 0000 00000 011223333333 3454 356788999998 999999999
Q ss_pred HHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 752 HILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 752 ~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+|+++ +|++.+ +++||| |++||+.++ ++|+|+| .+++|+.|+||+.++
T Consensus 193 ~l~~~-~~i~~~---~~~a~GD~~ND~~Ml~~a~---~svav~na~~~lk~~A~~vt~~~ 245 (260)
T d2rbka1 193 EIIRH-FGIKLE---ETMSFGDGGNDISMLRHAA---IGVAMGQAKEDVKAAADYVTAPI 245 (260)
T ss_dssp HHHHH-HTCCGG---GEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHSSEECCCG
T ss_pred HHHHh-ccccHh---heeEecCCcccHHHHHhCC---eEEEeCCCCHHHHHhCCEEeCCC
Confidence 99997 899875 799999 999999994 5699997 689999999999875
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.88 E-value=1.5e-21 Score=216.59 Aligned_cols=211 Identities=17% Similarity=0.201 Sum_probs=160.3
Q ss_pred EEEEEEeecCcCccccchhhcCch------hhhhc---CCCeEEEEEcCccc-cCChHHHHHHHHHHHHhCCCccCcEEE
Q psy2719 280 TVHVKALPIGIPFERFVQLAENAP------ENLKD---ENLKVILGVDRLDY-TKGLVHRIKAFERLLEKHPEYVEKVTF 349 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~~------~~~~~---~~~~iil~V~Rl~~-~KGi~~~l~A~~~ll~~~p~~~~~v~l 349 (808)
..++.++|+|+|++.|.+...... ...++ .++++|+++||+.. .||+..+++|+..+..+... .++.|
T Consensus 209 ~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~--~~~~l 286 (437)
T d2bisa1 209 EGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRF 286 (437)
T ss_dssp TTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEE
T ss_pred cCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccccchhHHHHHhhhccccccccc--cccee
Confidence 356788999999998876432111 11222 46789999999974 79999999999988654211 13568
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHH
Q psy2719 350 LQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVA 429 (808)
Q Consensus 350 v~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama 429 (808)
+++|.+. +.+... ++.+... . ..+.++.+.++.+++..+|+.||++++||..||||++++||||
T Consensus 287 vi~G~~~----~~~~~~---~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama 350 (437)
T d2bisa1 287 IIIGKGD----PELEGW---ARSLEEK----H-----GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMC 350 (437)
T ss_dssp EEECCBC----HHHHHH---HHHHHHT----C-----TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHT
T ss_pred eeecccc----cccccc---hhhhccc----c-----ccceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHH
Confidence 8777432 222222 2222211 1 1456788999999999999999999999999999999999999
Q ss_pred hccCCCceEEEcCCCCCccccC--ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHH
Q psy2719 430 CQIREPGVLILSPFAGAGGMMH--EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 430 ~~~~~~g~vVlS~~~G~~~~l~--~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 507 (808)
|+ .|+|+|+.+|..+.+. +|++|+|.|++++|++|.++|+++++.+++..+++++.++.+||++.++++++-.+
T Consensus 351 ~G----~Pvi~~~~g~~~e~i~~~~G~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~ 426 (437)
T d2bisa1 351 LG----AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYT 426 (437)
T ss_dssp TT----CEEEEESCTTHHHHCCTTTCEEECTTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred CC----CCEEEeCCCCcHHhEECCcEEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 95 5788898888777664 59999999999999999999987666666677777888888999999999999887
Q ss_pred ccccc
Q psy2719 508 ALDND 512 (808)
Q Consensus 508 ~~~~~ 512 (808)
++.++
T Consensus 427 ~~i~r 431 (437)
T d2bisa1 427 GSIDR 431 (437)
T ss_dssp TCSCC
T ss_pred HHHHh
Confidence 76443
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.88 E-value=2.2e-22 Score=211.45 Aligned_cols=204 Identities=15% Similarity=0.161 Sum_probs=142.9
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
|||+||+||||++ ++..++++++++|++|+++ |+.
T Consensus 2 Kli~~DlDGTLl~-----~~~~i~~~~~~~l~~l~~~----------------------------------------Gi~ 36 (285)
T d1nrwa_ 2 KLIAIDLDGTLLN-----SKHQVSLENENALRQAQRD----------------------------------------GIE 36 (285)
T ss_dssp CEEEEECCCCCSC-----TTSCCCHHHHHHHHHHHHT----------------------------------------TCE
T ss_pred eEEEEECCccccC-----CCCccCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 6899999999998 3457899999999999988 999
Q ss_pred EEEEeCCChhhHHHhcCc--cceEEEcccceeEecCCCce-eecCCChhHHHHHHHHHHHHHhhccCCCcEEEecCcEEE
Q psy2719 624 IGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPDGTK-FVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLT 700 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~~ 700 (808)
|+++|||++..+.+.+.. ...+++++||+.++++++.. +..+++.+ .+.++++.+... .....+........
T Consensus 37 ~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~i~~~~i~~~---~~~~i~~~~~~~--~~~~~~~~~~~~~~ 111 (285)
T d1nrwa_ 37 VVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRLYHHETIDKK---RAYDILSWLESE--NYYYEVFTGSAIYT 111 (285)
T ss_dssp EEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCEEEECCCCHH---HHHHHHHHHHHT--TCEEEEEESSCEEE
T ss_pred EEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCceeeeccCCHH---HHHHHHHHHHHc--CCceEEecCceEEe
Confidence 999999999998887753 23589999999999876554 45677775 456666666543 11111111111000
Q ss_pred EEc------------C----cCCh-----------------------------------------hhHHHHHHHHHHHHH
Q psy2719 701 FHY------------R----ETPI-----------------------------------------ERREYIIDRASQIFL 723 (808)
Q Consensus 701 ~~~------------~----~~~~-----------------------------------------~~~~~~~~~~~~~~~ 723 (808)
... + ..+. ... +..........
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 190 (285)
T d1nrwa_ 112 PQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFK-EKLEAGWKRYE 190 (285)
T ss_dssp CCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEECSCH-HHHHHHHHHHT
T ss_pred ccccHHHHHHHHHhhhhcCcccchhhhhhhhhhhhccccceeechHHHHhhcccchhheeeecccchH-HHHHHHHHHhh
Confidence 000 0 0000 000 00111111111
Q ss_pred h-cCeeE-EccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccc
Q psy2719 724 E-AGFEP-HNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVK 796 (808)
Q Consensus 724 ~-~~~~v-~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk 796 (808)
. .++.+ .++..++||.|+ ++|||.|+++++++ +|++.+ ++++|| |++||+.++ ++|||+| .+++|
T Consensus 191 ~~~~~~~~~s~~~~ldi~~~-~~~K~~ai~~l~~~-~gi~~~---~vi~~GD~~ND~~Ml~~a~---~svam~na~~~~k 262 (285)
T d1nrwa_ 191 HAEDLTLVSSAEHNFELSSR-KASKGQALKRLAKQ-LNIPLE---ETAAVGDSLNDKSMLEAAG---KGVAMGNAREDIK 262 (285)
T ss_dssp TCTTEEEECSSTTEEEEEET-TCSHHHHHHHHHHH-TTCCGG---GEEEEESSGGGHHHHHHSS---EEEECTTCCHHHH
T ss_pred cCCCeEEEEeCCcEEEEecc-cchhhhHHHHHHhh-cccCcc---cEEEEeCCHHHHHHHHhCC---eEEEeCCCCHHHH
Confidence 1 24554 478899999998 99999999999997 899875 799999 999999994 5699997 58999
Q ss_pred cccccccCcC
Q psy2719 797 SSWKQGSNHT 806 (808)
Q Consensus 797 ~~A~~~~~~~ 806 (808)
+.|+|++.++
T Consensus 263 ~~A~~v~~~~ 272 (285)
T d1nrwa_ 263 SIADAVTLTN 272 (285)
T ss_dssp HHCSEECCCG
T ss_pred HhCCEEcCCC
Confidence 9999999875
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=5.1e-22 Score=207.20 Aligned_cols=210 Identities=15% Similarity=0.145 Sum_probs=138.9
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
.|||+||+||||++ ++..+++++.++|++|+++ |+
T Consensus 4 iKli~~DlDGTL~~-----~~~~i~~~~~~al~~L~~~----------------------------------------gi 38 (271)
T d1rkqa_ 4 IKLIAIDMDGTLLL-----PDHTISPAVKNAIAAARAR----------------------------------------GV 38 (271)
T ss_dssp CCEEEECCCCCCSC-----TTSCCCHHHHHHHHHHHHT----------------------------------------TC
T ss_pred eeEEEEeCCccccC-----CCCccCHHHHHHHHHHHHC----------------------------------------CC
Confidence 57999999999998 3457999999999999988 99
Q ss_pred eEEEEeCCChhhHHHhcC-----ccceEEEcccceeEecCCC-c-eeecCCChhHHHHHHHHHHHHHhhc---cCCCcEE
Q psy2719 623 NIGIISGRTLENLMKMVN-----IEKVTYAGSHGLEILHPDG-T-KFVHPVPKEYAEKLRQLIKALQDEV---CHDGAWI 692 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~-----~~~~~li~~nG~~i~~~~~-~-~~~~~~~~~~~~~v~~i~~~~~~~~---~~~g~~i 692 (808)
.|+|+|||++..+.+++. .+..+++++||+.++.+.+ . ....+++.+....+..+.+...... ...+.+.
T Consensus 39 ~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 118 (271)
T d1rkqa_ 39 NVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYT 118 (271)
T ss_dssp EEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEE
T ss_pred EEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHHHHHhhcceEEEEecceEEe
Confidence 999999999988876653 2346789999999986533 3 3445566553333333333222110 0111111
Q ss_pred EecCcE-------------EEEE-cC-------------cCChhhHHHHHHHHHHHHHhcCee-EEccCeEEEEeCCCCC
Q psy2719 693 ENKGVL-------------LTFH-YR-------------ETPIERREYIIDRASQIFLEAGFE-PHNALMAIEAKPPVKW 744 (808)
Q Consensus 693 e~k~~~-------------~~~~-~~-------------~~~~~~~~~~~~~~~~~~~~~~~~-v~~g~~~vEv~p~~~v 744 (808)
..+... ..+. .. ..++....+..+.+.+.+.. .+. +..+..++||.|+ ++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~i~p~-~~ 196 (271)
T d1rkqa_ 119 ANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKE-KYTVLKSAPYFLEILDK-RV 196 (271)
T ss_dssp CCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHH-HEEEEEEETTEEEEEET-TC
T ss_pred ccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhc-ceEEEEecCceEEecCC-CC
Confidence 111000 0000 00 00111111222222222222 233 4578889999998 99
Q ss_pred CHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 745 DQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 745 ~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
|||.||+.|+++ ++++.+ +++||| |++||+.++ ++|+|+| .+++|+.|+|+++++
T Consensus 197 ~K~~al~~l~~~-~~i~~~---~ii~~GD~~ND~~ml~~~~---~~~am~na~~~lk~~a~~i~~~~ 256 (271)
T d1rkqa_ 197 NKGTGVKSLADV-LGIKPE---EIMAIGDQENDIAMIEYAG---VGVAVDNAIPSVKEVANFVTKSN 256 (271)
T ss_dssp SHHHHHHHHHHH-HTCCGG---GEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCSEECCCT
T ss_pred Ccccccceehhh-cccchh---cEEEEeCcHhHHHHHHhCC---cEEEeCCCCHHHHHhCCEEcCCC
Confidence 999999999997 898865 799999 999999994 5699997 689999999999875
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.85 E-value=3.5e-21 Score=194.89 Aligned_cols=201 Identities=14% Similarity=0.188 Sum_probs=141.5
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
-|+|+||+||||++ +...++++++++|++|.+. |+
T Consensus 2 iK~i~~D~DGTL~~-----~~~~i~~~~~~~l~~l~~~----------------------------------------gi 36 (230)
T d1wr8a_ 2 IKAISIDIDGTITY-----PNRMIHEKALEAIRRAESL----------------------------------------GI 36 (230)
T ss_dssp CCEEEEESTTTTBC-----TTSCBCHHHHHHHHHHHHT----------------------------------------TC
T ss_pred ceEEEEecCCCCcC-----CCCccCHHHHHHHHHHHhC----------------------------------------CC
Confidence 47999999999998 3457899999999999887 89
Q ss_pred eEEEEeCCChhhHHHhcCc--cceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEecCcEEE
Q psy2719 623 NIGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIENKGVLLT 700 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~k~~~~~ 700 (808)
.|+++|||+...+...+.. .+.+++++||+.+.......+......++. ....+...+... ........+...+.
T Consensus 37 ~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~ 113 (230)
T d1wr8a_ 37 PIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWI-LWNEIRKRFPNA--RTSYTMPDRRAGLV 113 (230)
T ss_dssp CEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHH-HHHHHHHHCTTC--CBCTTGGGCSSCEE
T ss_pred eEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHH-HHHHHHHhcccc--cceeecccceeeEE
Confidence 9999999999888776642 345789999999988765555445544431 122333332221 00011112222333
Q ss_pred EEcCcCChhhHHHHHHHHHHHHHhc--CeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CH
Q psy2719 701 FHYRETPIERREYIIDRASQIFLEA--GFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NE 774 (808)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~ 774 (808)
+.-...+ .+.++++++.. .+....+..++||+|+ +++|+.|++.++++ +|++++ ++++|| |+
T Consensus 114 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~iei~~~-~~~K~~al~~l~~~-~~i~~~---~~~~iGD~~NDi 181 (230)
T d1wr8a_ 114 IMRETIN-------VETVREIINELNLNLVAVDSGFAIHVKKP-WINKGSGIEKASEF-LGIKPK---EVAHVGDGENDL 181 (230)
T ss_dssp ECTTTSC-------HHHHHHHHHHTTCSCEEEECSSCEEEECT-TCCHHHHHHHHHHH-HTSCGG---GEEEEECSGGGH
T ss_pred Eeccccc-------HHHHHHHHHHhccceEEeeCCcEEEEeeC-CcCcchhhcccccc-cccchh---heeeeecCccHH
Confidence 2211111 12233444443 3455677789999998 99999999999997 899875 799999 99
Q ss_pred HHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 775 DAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 775 ~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+||+.++ ++|+|+| .+.+|+.|+||++++
T Consensus 182 ~ml~~ag---~~vav~na~~~~k~~A~~v~~~~ 211 (230)
T d1wr8a_ 182 DAFKVVG---YKVAVAQAPKILKENADYVTKKE 211 (230)
T ss_dssp HHHHHSS---EEEECTTSCHHHHTTCSEECSSC
T ss_pred HHHHHCC---eEEEECCCCHHHHHhCCEEECCC
Confidence 9999994 5699997 588999999999864
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.85 E-value=1.8e-20 Score=186.33 Aligned_cols=183 Identities=19% Similarity=0.229 Sum_probs=138.8
Q ss_pred CcCccccchhhcCc------hhhhhc---CCCeEEEEEcCcc-ccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCC
Q psy2719 289 GIPFERFVQLAENA------PENLKD---ENLKVILGVDRLD-YTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRT 358 (808)
Q Consensus 289 GID~~~f~~~~~~~------~~~~~~---~~~~iil~V~Rl~-~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~ 358 (808)
|||++.|.+..... ..++++ +++++|+++||+. +.||++.+++|++.|.++.+. .++.|+++|.+
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g--- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG--- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCB---
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCC--CCeEEEEEeec---
Confidence 89999997653211 122332 6788999999997 589999999999999765432 24668877742
Q ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceE
Q psy2719 359 DVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVL 438 (808)
Q Consensus 359 ~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~v 438 (808)
.+.++... +.+...+ ..++++.+.++.+++..+|+.||++|+||..||||++++|||+|+ .|+
T Consensus 76 -~~~~~~~~---~~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G----~pv 138 (196)
T d2bfwa1 76 -DPELEGWA---RSLEEKH---------GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIP 138 (196)
T ss_dssp -CHHHHHHH---HHHHHHC---------TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT----CEE
T ss_pred -ccchhhhh---hhhhhcc---------ceeEEeeeccccccchhccccccccccccccccccccchhhhhcC----cee
Confidence 13333333 3332222 245678899999999999999999999999999999999999995 578
Q ss_pred EEcCCCCCccccC--ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcC
Q psy2719 439 ILSPFAGAGGMMH--EALLVNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQL 493 (808)
Q Consensus 439 VlS~~~G~~~~l~--~~llvnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~ 493 (808)
|+|..+|..+.+. .|++++|.|+++++++|.++|.+..+.+.+..+.+++++.++
T Consensus 139 I~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~f 195 (196)
T d2bfwa1 139 IASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 195 (196)
T ss_dssp EEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred eecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 8888877777664 489999999999999999999987766666666677766554
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.84 E-value=3.2e-20 Score=193.99 Aligned_cols=210 Identities=14% Similarity=0.122 Sum_probs=142.0
Q ss_pred CCCceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCC
Q psy2719 540 GNCKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANM 619 (808)
Q Consensus 540 ~~~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~ 619 (808)
.+.-|||+||+||||+.. +...++++++++|++|.++
T Consensus 7 ~~~ikli~~DlDGTLl~~----~~~~i~~~~~~al~~l~~~--------------------------------------- 43 (283)
T d2b30a1 7 GADIKLLLIDFDGTLFVD----KDIKVPSENIDAIKEAIEK--------------------------------------- 43 (283)
T ss_dssp TCCCCEEEEETBTTTBCC----TTTCSCHHHHHHHHHHHHH---------------------------------------
T ss_pred ccCccEEEEECCCCCcCC----CCCcCCHHHHHHHHHHHHC---------------------------------------
Confidence 467789999999999863 2357999999999999887
Q ss_pred CCCeEEEEeCCChhhHHHhcCc--------cceEEEcccceeEecCCCce-eecCCChhHHHHHHHHHHHHHhhccCCCc
Q psy2719 620 PDVNIGIISGRTLENLMKMVNI--------EKVTYAGSHGLEILHPDGTK-FVHPVPKEYAEKLRQLIKALQDEVCHDGA 690 (808)
Q Consensus 620 pg~~v~I~SGR~~~~l~~~~~~--------~~~~li~~nG~~i~~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~~~g~ 690 (808)
|+.|+|+|||++..+.+.+.. ...+.++.||+.++.+.+.. +...++.. ...++++.+.........
T Consensus 44 -Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 119 (283)
T d2b30a1 44 -GYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETD---VYAELISYLVEKNLVNQT 119 (283)
T ss_dssp -TCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEECTTCCEEEECCCCHH---HHHHHHHHHHHTTCGGGE
T ss_pred -CCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEEEeeeEEEcCCCcEeeecccCHH---HHHHHHHHHHhhcccceE
Confidence 999999999999988777641 23457889999998775543 45566654 344455544432000111
Q ss_pred EEEecCcEEEEEcCc-----------------------------------CChhhHHHHHHHHHHHHHhcCee-EEccCe
Q psy2719 691 WIENKGVLLTFHYRE-----------------------------------TPIERREYIIDRASQIFLEAGFE-PHNALM 734 (808)
Q Consensus 691 ~ie~k~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~-v~~g~~ 734 (808)
++........ .... .+++..+.+.+.+.+.+.. ... +.++..
T Consensus 120 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 197 (283)
T d2b30a1 120 IFHRGESNYV-TEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKN-KLTIFTTYNG 197 (283)
T ss_dssp EEEETTEEEE-ETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEEEECCCTTTHHHHHHHHHHHSTT-TEEEEECTTS
T ss_pred EEEecceeEE-eccchHHHHHHHHhhccccccccHHHHhhcccceEEEEecCHHHHHHHHHHHHHHhcc-cceEEEecce
Confidence 2221111110 0000 0001111222222222221 233 457788
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 735 AIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 735 ~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
++||.|+ ++|||.|++.++++ ++++.+ ++++|| |++||+.++ ++|+|+| .+++|+.|+|+++++
T Consensus 198 ~~~i~~~-~~~K~~~l~~l~~~-~~i~~~---~vi~~GD~~ND~~Ml~~a~---~~va~~na~~~~k~~a~~v~~~~ 266 (283)
T d2b30a1 198 HAEVTKL-GHDKYTGINYLLKH-YNISND---QVLVVGDAENDIAMLSNFK---YSFAVANATDSAKSHAKCVLPVS 266 (283)
T ss_dssp CEEEEET-TCCHHHHHHHHHHH-TTCCGG---GEEEEECSGGGHHHHHSCS---EEEECTTCCHHHHHHSSEECSSC
T ss_pred eEeecCC-cchhHHHHHHHhhh-cccccc---eEEEecCChhhHHHHHhCC---cEEEeCCCCHHHHHhCCEEECCc
Confidence 9999998 99999999999997 898875 799999 999999984 5699997 689999999999753
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=2.1e-20 Score=201.16 Aligned_cols=201 Identities=17% Similarity=0.209 Sum_probs=149.5
Q ss_pred EEEEEEeecCcCccccchhhcCc-hh-hhhc----CCCeEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEE
Q psy2719 280 TVHVKALPIGIPFERFVQLAENA-PE-NLKD----ENLKVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQIS 353 (808)
Q Consensus 280 ~~~v~v~p~GID~~~f~~~~~~~-~~-~~~~----~~~~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig 353 (808)
..++.++|+|||++.+.+..... .+ .++. .++++|+++||+.+.||++.+++|++++.++.|+. .+++++
T Consensus 158 ~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~----~~~ii~ 233 (370)
T d2iw1a1 158 PERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVV 233 (370)
T ss_dssp GGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEE
T ss_pred cceEEEEEeecccccccccCchhhhhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccc----eeeecc
Confidence 34577899999998775532211 11 2221 57889999999999999999999999988877654 244455
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccC
Q psy2719 354 VPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIR 433 (808)
Q Consensus 354 ~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~ 433 (808)
.+. .. +++++++.+++.. ..+++ .++. +++..+|+.||++|+||..||||++++|||||+
T Consensus 234 g~~--~~-------~~~~~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G-- 293 (370)
T d2iw1a1 234 GQD--KP-------RKFEALAEKLGVR------SNVHF-FSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAG-- 293 (370)
T ss_dssp SSS--CC-------HHHHHHHHHHTCG------GGEEE-ESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT--
T ss_pred ccc--cc-------ccccccccccccc------ccccc-cccc--cccccccccccccccccccccccceeeecccCC--
Confidence 322 11 1234455554432 13444 4543 578999999999999999999999999999996
Q ss_pred CCceEEEcCCCCCccccC---ceEE-ECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHHH
Q psy2719 434 EPGVLILSPFAGAGGMMH---EALL-VNPYEIDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSMG 507 (808)
Q Consensus 434 ~~g~vVlS~~~G~~~~l~---~~ll-vnP~d~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 507 (808)
.|+|+|+.+|..+.+. +|.+ ++|.|++++|++|.++|++ ++.++++.++++++++++++..|.+...+-++
T Consensus 294 --~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d-~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 294 --LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp --CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred --eeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhChhHHHHHHHHHHh
Confidence 5699999999888874 3655 5889999999999999984 55566666778899999999999987766554
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.81 E-value=4.7e-20 Score=187.13 Aligned_cols=197 Identities=14% Similarity=0.160 Sum_probs=139.4
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
|+|+||+||||++ +...+++++.++|++|.+. |+.
T Consensus 4 Kli~~D~DGTL~~-----~~~~i~~~~~~al~~l~~~----------------------------------------g~~ 38 (225)
T d1l6ra_ 4 RLAAIDVDGNLTD-----RDRLISTKAIESIRSAEKK----------------------------------------GLT 38 (225)
T ss_dssp CEEEEEHHHHSBC-----TTSCBCHHHHHHHHHHHHT----------------------------------------TCE
T ss_pred EEEEEecCCCCcC-----CCCcCCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 6999999999997 3457899999999999987 999
Q ss_pred EEEEeCCChhhHHHhc---CccceEEEcccceeEecCCCceeecCCChhHHHHHHHHHHHHHhhccCCCcEEEe--cCcE
Q psy2719 624 IGIISGRTLENLMKMV---NIEKVTYAGSHGLEILHPDGTKFVHPVPKEYAEKLRQLIKALQDEVCHDGAWIEN--KGVL 698 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~---~~~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie~--k~~~ 698 (808)
|+++|||+...+.... +. ..+++++||+.+..+++... .....+ .+.++++.+.+...... .... ....
T Consensus 39 v~~~TGr~~~~~~~~~~~~~~-~~~~i~~~G~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 112 (225)
T d1l6ra_ 39 VSLLSGNVIPVVYALKIFLGI-NGPVFGENGGIMFDNDGSIK-KFFSNE---GTNKFLEEMSKRTSMRS-ILTNRWREAS 112 (225)
T ss_dssp EEEECSSCHHHHHHHHHHHTC-CSCEEEGGGTEEECTTSCEE-ESSCSH---HHHHHHHHHTTTSSCBC-CGGGGGCSSS
T ss_pred EEEEcCCchhhhHHHHHHcCC-CceEEeecceEEEeCCccEE-EecChH---HHHHHHHHHHHhcCcce-eecccceeee
Confidence 9999999987665543 43 34688999999988766544 333332 34455555444310000 0000 1111
Q ss_pred EEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CH
Q psy2719 699 LTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NE 774 (808)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~ 774 (808)
..+. .+++. .+.+.......++.+..+...+||.|+ +.+||.|++.|+++ +|++.+ ++++|| |+
T Consensus 113 ~~~~---~~~~~----~~~~~~~~~~~~~~i~~~~~~~~i~~~-~~~K~~ai~~l~~~-~~i~~~---~v~~~GDs~nD~ 180 (225)
T d1l6ra_ 113 TGFD---IDPED----VDYVRKEAESRGFVIFYSGYSWHLMNR-GEDKAFAVNKLKEM-YSLEYD---EILVIGDSNNDM 180 (225)
T ss_dssp EEEB---CCGGG----HHHHHHHHHTTTEEEEEETTEEEEEET-TCSHHHHHHHHHHH-TTCCGG---GEEEECCSGGGH
T ss_pred eccc---cCHHH----HHHHHHHHhhcCcEEEECCcEEEecCC-ccchHHHHHHHhhh-hccchh---heeeecCCcchH
Confidence 1111 11211 233334444456778778888999998 99999999999997 899875 799999 99
Q ss_pred HHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 775 DAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 775 ~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+||+.++ ++|+|+| .+++|+.|+|++.++
T Consensus 181 ~m~~~a~---~~vav~na~~~~k~~ad~v~~~~ 210 (225)
T d1l6ra_ 181 PMFQLPV---RKACPANATDNIKAVSDFVSDYS 210 (225)
T ss_dssp HHHTSSS---EEEECTTSCHHHHHHCSEECSCC
T ss_pred HHHHHCC---eEEEECCCcHHHHHhCCEEECCC
Confidence 9999994 5699997 688999999999865
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.78 E-value=6.2e-20 Score=188.41 Aligned_cols=168 Identities=14% Similarity=0.283 Sum_probs=108.9
Q ss_pred CCeEEEEeCCChhhHHHhcC---c-cceEEEcccceeEecCCCce--eecCCChhHHHHHHHHHHHHHhhccCCCcEEE-
Q psy2719 621 DVNIGIISGRTLENLMKMVN---I-EKVTYAGSHGLEILHPDGTK--FVHPVPKEYAEKLRQLIKALQDEVCHDGAWIE- 693 (808)
Q Consensus 621 g~~v~I~SGR~~~~l~~~~~---~-~~~~li~~nG~~i~~~~~~~--~~~~~~~~~~~~v~~i~~~~~~~~~~~g~~ie- 693 (808)
|+.|+++|||++..+.+++. . .+.+++++||+.++.+++.. +...+...|. ..++..+.+. .++....
T Consensus 34 g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~ 108 (244)
T d1s2oa1 34 NFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQ---RDILQAIADG--FEALKPQS 108 (244)
T ss_dssp GEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCC---HHHHHHHHHT--CTTEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHh---HHHHHHHHhh--cccccccC
Confidence 89999999999998888763 2 23468999999998765321 1111111110 1222222222 2222221
Q ss_pred ---ecCcEEEEEcCcCChhhHHHHHHHHHHHHHhc--Cee-EEccCeEEEEeCCCCCCHHHHHHHHHHHhcCCCCCccee
Q psy2719 694 ---NKGVLLTFHYRETPIERREYIIDRASQIFLEA--GFE-PHNALMAIEAKPPVKWDQGRASIHILRTMYGVDWSERVR 767 (808)
Q Consensus 694 ---~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-v~~g~~~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~ 767 (808)
.....+.+.+...... +..+.+.+..... .+. ...+..++||.|+ +++||.|++.|+++ +|++.+ +
T Consensus 109 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~K~~a~~~l~~~-~gi~~~---~ 180 (244)
T d1s2oa1 109 PLEQNPWKISYHLDPQACP---TVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQ-RSNKGNATQYLQQH-LAMEPS---Q 180 (244)
T ss_dssp GGGCBTTBEEEEECTTSCT---HHHHHHHHHHHTSSCCEEEEEETTTEEEEEET-TCSHHHHHHHHHHH-TTCCGG---G
T ss_pred hhhhcceEEEEeccccccH---HHHHHHHHHHHhhcccceeeecCCcEEEEEeC-ccchhHHHHHHHHh-ccCChh---h
Confidence 2233455554332221 2334555555443 233 3466689999998 99999999999997 899875 7
Q ss_pred EEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccC
Q psy2719 768 IIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSN 804 (808)
Q Consensus 768 via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~ 804 (808)
++||| |++||+.++ .+|+|+| .+++|+.|+.+.+
T Consensus 181 ~v~~GD~~ND~~Ml~~~~---~~vav~na~~~lk~~a~~~~~ 219 (244)
T d1s2oa1 181 TLVCGDSGNDIGLFETSA---RGVIVRNAQPELLHWYDQWGD 219 (244)
T ss_dssp EEEEECSGGGHHHHTSSS---EEEECTTCCHHHHHHHHHHCC
T ss_pred EEEEcCCCCCHHHHhhCC---cEEEeCCCCHHHHHHhhcccc
Confidence 99999 999999994 5699997 6899999995544
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=2.5e-18 Score=174.53 Aligned_cols=206 Identities=16% Similarity=0.241 Sum_probs=123.0
Q ss_pred CceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCC
Q psy2719 542 CKLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPD 621 (808)
Q Consensus 542 ~~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg 621 (808)
+.||++||+||||++ +++.++++++++|++|+++ |
T Consensus 2 ~~kl~~fDlDGTLl~-----~~~~i~~~~~~al~~l~~~----------------------------------------g 36 (243)
T d2amya1 2 GPALCLFDVDGTLTA-----PRQKITKEMDDFLQKLRQK----------------------------------------I 36 (243)
T ss_dssp CSEEEEEESBTTTBC-----TTSCCCHHHHHHHHHHTTT----------------------------------------S
T ss_pred CCEEEEEcCcCCeeC-----CCCcCCHHHHHHHHHHHcC----------------------------------------C
Confidence 357899999999998 3468999999999999775 5
Q ss_pred CeEEEEeCCChhhHHHhcCc----cceEEEcccceeEecCCCceeecCCChhHHH-HHHHHHHHHHh---hc---cCCCc
Q psy2719 622 VNIGIISGRTLENLMKMVNI----EKVTYAGSHGLEILHPDGTKFVHPVPKEYAE-KLRQLIKALQD---EV---CHDGA 690 (808)
Q Consensus 622 ~~v~I~SGR~~~~l~~~~~~----~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~-~v~~i~~~~~~---~~---~~~g~ 690 (808)
.++++|||....+...+.. ...++++.||..+...++..+...+..+... .+......... .. .....
T Consensus 37 -~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (243)
T d2amya1 37 -KIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGT 115 (243)
T ss_dssp -EEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETTEEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSC
T ss_pred -CEEEEcCCChHHhHHHHhhhccccceEEecCcEEEEecCCccceecchhHHHHHHHHHHHHhhhhhhheeccccccccc
Confidence 5889999998887766532 2234556667666655444444443332111 11111111100 00 01111
Q ss_pred EEEecCcEEEEEcCcCC--hhhH-------------HHHHHHHHHHHHhcCeeE-EccCeEEEEeCCCCCCHHHHHHHHH
Q psy2719 691 WIENKGVLLTFHYRETP--IERR-------------EYIIDRASQIFLEAGFEP-HNALMAIEAKPPVKWDQGRASIHIL 754 (808)
Q Consensus 691 ~ie~k~~~~~~~~~~~~--~~~~-------------~~~~~~~~~~~~~~~~~v-~~g~~~vEv~p~~~v~KG~av~~ll 754 (808)
..+.......+...... .... .+....+.+......+.+ .++..++||.|+ ++|||+|+++|+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lei~~~-~vsKg~al~~l~ 194 (243)
T d2amya1 116 FIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPD-GWDKRYCLRHVE 194 (243)
T ss_dssp SEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTTSCEEEEEETTTEEEEEET-TCSGGGGGGGTT
T ss_pred hhhhhhhhhcccccccccchhhhhhhhhhhcchhhhHHHHHHHHHHhcccceEEEecCCccceeecc-ccCHHHHHHHHh
Confidence 12222222333222211 1100 011112222222224444 577889999998 999999998875
Q ss_pred HHhcCCCCCcceeEEEEe--------CHHHHHhccCCccEEEeCCCCcccccccccc
Q psy2719 755 RTMYGVDWSERVRIIYAG--------NEDAMLALQGIACTFRVDSSPTVKSSWKQGS 803 (808)
Q Consensus 755 ~~~~~i~~~~~~~via~G--------D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~ 803 (808)
+++.+ ++++|| |++||++++. .+++|+|++++|+.|+.++
T Consensus 195 ----~~~~~---ev~afGD~~~~g~NDi~Ml~~~g~--~~~~v~~~~~~~~~~~~l~ 242 (243)
T d2amya1 195 ----NDGYK---TIYFFGDKTMPGGNDHEIFTDPRT--MGYSVTAPEDTRRICELLF 242 (243)
T ss_dssp ----TSCCS---EEEEEECSCC---CCCHHHHCTTE--EEEECSSHHHHHHHHHHHC
T ss_pred ----CCCcc---eEEEEcCCCCCCCCcHHHHHccCC--cEEEeCCHHHHHHHHHHHh
Confidence 44543 899999 7999999963 3489999999999988764
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.74 E-value=1.5e-18 Score=176.83 Aligned_cols=196 Identities=18% Similarity=0.151 Sum_probs=122.7
Q ss_pred eEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCe
Q psy2719 544 LSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVN 623 (808)
Q Consensus 544 rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~ 623 (808)
|+||+|+||||++. ..+++++++|++|+++ |+.
T Consensus 3 Kli~~DlDGTLl~~-------~~~~~~~~ai~~l~~~----------------------------------------G~~ 35 (243)
T d1wzca1 3 RLIFLDIDKTLIPG-------YEPDPAKPIIEELKDM----------------------------------------GFE 35 (243)
T ss_dssp EEEEECCBTTTBSS-------SCSGGGHHHHHHHHHT----------------------------------------TEE
T ss_pred EEEEEeCCCCCCCC-------CCCHHHHHHHHHHHHC----------------------------------------CCE
Confidence 79999999999972 2367889999999988 999
Q ss_pred EEEEeCCChhhHHHhcCc--cceEEEcccceeEecCCCceeecC------------CChhHHHHHHHHHHHHHhhc-cCC
Q psy2719 624 IGIISGRTLENLMKMVNI--EKVTYAGSHGLEILHPDGTKFVHP------------VPKEYAEKLRQLIKALQDEV-CHD 688 (808)
Q Consensus 624 v~I~SGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~~~~~~~~------------~~~~~~~~v~~i~~~~~~~~-~~~ 688 (808)
|+++|||++..+..++.. ...++|++||+.+..+++...... .... .+.+...+..+.... ...
T Consensus 36 ~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 114 (243)
T d1wzca1 36 IIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIR-VEKIREELKKLENIYGLKY 114 (243)
T ss_dssp EEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTTCCC----------CEEEECSCC-HHHHHHHHHHHHHHHTCBC
T ss_pred EEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCCceecccchhHHHHHHHHHHhhh-HHHHHHHHHhhhhhcccch
Confidence 999999999998877742 235789999999987764322111 0011 111222222111110 000
Q ss_pred CcE-----------E--------EecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHH
Q psy2719 689 GAW-----------I--------ENKGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRA 749 (808)
Q Consensus 689 g~~-----------i--------e~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~a 749 (808)
... . .............. ..+.+.....++.+..+. .+++.|+ +++||.|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~K~~a 183 (243)
T d1wzca1 115 YGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSR---------DGWEEVLVEGGFKVTMGS-RFYTVHG-NSDKGKA 183 (243)
T ss_dssp GGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEECBCSS---------SCHHHHHHHTTCEEEECS-SSEEEEC-SCCHHHH
T ss_pred hhhhhHHHHHHhhcCchhHHHHHHhhhcchhhhhhhh---------HHHHHhhhhcCeEEeecc-cccchhh-hhccHHH
Confidence 000 0 00011111110000 011222233456555544 3677887 9999999
Q ss_pred HHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCC-CccccccccccC
Q psy2719 750 SIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSS-PTVKSSWKQGSN 804 (808)
Q Consensus 750 v~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~-~~vk~~A~~~~~ 804 (808)
++.+++++.+++.+ +++||| |++||+.++ .+|+|+|+ +++|+.|+.++.
T Consensus 184 l~~l~~~~~~~~~~---~~~a~GD~~ND~~Ml~~a~---~~va~~Na~~~~~~~~~~i~~ 237 (243)
T d1wzca1 184 AKILLDFYKRLGQI---ESYAVGDSYNDFPMFEVVD---KVFIVGSLKHKKAQNVSSIID 237 (243)
T ss_dssp HHHHHHHHHTTSCE---EEEEEECSGGGHHHHTTSS---EEEEESSCCCTTCEEESCHHH
T ss_pred HHHHHHHhcCCCcc---cEEEEcCCHhHHHHHHcCC---cEEEeCCCChHHHhhhhHHHH
Confidence 99999973356654 899999 999999994 56999984 789999988764
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=4.4e-18 Score=172.38 Aligned_cols=204 Identities=17% Similarity=0.179 Sum_probs=119.1
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
|++||+||||++ ++.+++++++++|++|+++ |+ +
T Consensus 3 i~lFDlDGTLl~-----~~~~is~~~~~~i~~l~~~----------------------------------------g~-~ 36 (244)
T d2fuea1 3 LCLFDVDGTLTP-----ARQKIDPEVAAFLQKLRSR----------------------------------------VQ-I 36 (244)
T ss_dssp EEEEESBTTTBS-----TTSCCCHHHHHHHHHHTTT----------------------------------------SE-E
T ss_pred EEEEccccCccC-----CCCcCCHHHHHHHHHHHhC----------------------------------------CC-E
Confidence 444699999998 3457999999999999887 75 5
Q ss_pred EEEeCCChhhHHH-hcCc-----cceEEEcccceeEecCCCceeecCCChh-HHHHHHHHHHHHHhh---c---cCCCcE
Q psy2719 625 GIISGRTLENLMK-MVNI-----EKVTYAGSHGLEILHPDGTKFVHPVPKE-YAEKLRQLIKALQDE---V---CHDGAW 691 (808)
Q Consensus 625 ~I~SGR~~~~l~~-~~~~-----~~~~li~~nG~~i~~~~~~~~~~~~~~~-~~~~v~~i~~~~~~~---~---~~~g~~ 691 (808)
+++|||....... +... ...++++.||+.+...+...+.+.+... ............... . .....+
T Consensus 37 ~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (244)
T d2fuea1 37 GVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTF 116 (244)
T ss_dssp EEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEETTEECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCS
T ss_pred EEEecCChhhhhhhhhhhhccccccceeecccceeeccCCccceeechhHHHhhhHHHHHHhhhhhhhheecccccccch
Confidence 5667776655444 3332 2357889999999876544333332221 011111111111110 0 011111
Q ss_pred EEecCcEEEEEcCcCChhh--HHH----------HHHHHHHHHHh---cCeeE-EccCeEEEEeCCCCCCHHHHHHHHHH
Q psy2719 692 IENKGVLLTFHYRETPIER--REY----------IIDRASQIFLE---AGFEP-HNALMAIEAKPPVKWDQGRASIHILR 755 (808)
Q Consensus 692 ie~k~~~~~~~~~~~~~~~--~~~----------~~~~~~~~~~~---~~~~v-~~g~~~vEv~p~~~v~KG~av~~ll~ 755 (808)
.........++........ ... ..+........ ....+ .++..++||.|+ ++|||+|+++|++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lei~~~-~vsKg~al~~L~~ 195 (244)
T d2fuea1 117 IEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPE-GWDKRYCLDSLDQ 195 (244)
T ss_dssp EEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEET-TCSTTHHHHHHTT
T ss_pred hhhhhhhhhccccccccchhhhhhhhhhccchhhHHHHHHHHHHHhhccceeEeeccCccceecch-hccHHHHHHHHhc
Confidence 2222222233222211110 000 00111111122 13333 577889999998 9999999999875
Q ss_pred HhcCCCCCcceeEEEEe--------CHHHHHhccCCccEEEeCCC-CccccccccccC
Q psy2719 756 TMYGVDWSERVRIIYAG--------NEDAMLALQGIACTFRVDSS-PTVKSSWKQGSN 804 (808)
Q Consensus 756 ~~~~i~~~~~~~via~G--------D~~Mf~~~~~~~~~vav~~~-~~vk~~A~~~~~ 804 (808)
. +.+ +|++|| |++||++++.. ++||+|+ +++|..|++++|
T Consensus 196 ~----~~~---ev~afGD~~~~G~ND~eml~~a~~~--~~av~na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 196 D----SFD---TIHFFGNETSPGGNDFEIFADPRTV--GHSVVSPQDTVQRCREIFFP 244 (244)
T ss_dssp S----CCS---EEEEEESCCSTTSTTHHHHHSTTSE--EEECSSHHHHHHHHHHHHCT
T ss_pred C----Chh---hEEEEcCCCCCCCCcHHHHHcCCCc--EEEcCCHHHHHHHHHHhcCC
Confidence 2 433 899998 89999999633 4999984 889999999886
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.73 E-value=7.7e-18 Score=169.91 Aligned_cols=189 Identities=13% Similarity=0.134 Sum_probs=118.9
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDV 622 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~ 622 (808)
..|||+|+||||++. +..++++++++|++|+++ |+
T Consensus 4 ~~li~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~----------------------------------------Gi 38 (232)
T d1xvia_ 4 PLLVFSDLDGTLLDS-----HSYDWQPAAPWLTRLREA----------------------------------------NV 38 (232)
T ss_dssp CEEEEEECTTTTSCS-----SCCSCCTTHHHHHHHHHT----------------------------------------TC
T ss_pred CEEEEEECCCCccCC-----cCcCCHHHHHHHHHHHHC----------------------------------------CC
Confidence 458999999999983 357889999999999988 99
Q ss_pred eEEEEeCCChhhHHHhc---CccceEEEcccceeEecCCCcee-------ecCCChhHHHHHHHHHHHHHhhccCCCcEE
Q psy2719 623 NIGIISGRTLENLMKMV---NIEKVTYAGSHGLEILHPDGTKF-------VHPVPKEYAEKLRQLIKALQDEVCHDGAWI 692 (808)
Q Consensus 623 ~v~I~SGR~~~~l~~~~---~~~~~~li~~nG~~i~~~~~~~~-------~~~~~~~~~~~v~~i~~~~~~~~~~~g~~i 692 (808)
.|+++|||+...+.+.+ +..+.+++++||+.++....... ....... .+........... ......
T Consensus 39 ~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~ 114 (232)
T d1xvia_ 39 PVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHG---EISLVLNTLREKE-HFKFTT 114 (232)
T ss_dssp CEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHH---HHHHHHHHHHHHH-CCCEEE
T ss_pred EEEEEeCCChhhchhHHHHhccCCceEEccCCeEEEecCCccccchhhhhhhHHHHH---HHHHhhhhhhhhh-cccccc
Confidence 99999999999887776 34456799999999986543211 1112211 1111111111100 000000
Q ss_pred E-----------------------ecCcEEEEEcCcCChhhHHHHHHHHHHHHHhcCeeEEccCeEEEEeCCCCCCHHHH
Q psy2719 693 E-----------------------NKGVLLTFHYRETPIERREYIIDRASQIFLEAGFEPHNALMAIEAKPPVKWDQGRA 749 (808)
Q Consensus 693 e-----------------------~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~vEv~p~~~v~KG~a 749 (808)
. ............ + .................+..+..++|+.|+ +++||.|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~K~~~ 188 (232)
T d1xvia_ 115 FDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRD-S----DERMAQFTARLNELGLQFMQGARFWHVLDA-SAGKDQA 188 (232)
T ss_dssp GGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECS-C----HHHHHHHHHHHHHTTEEEEECSSCEEEEET-TCCHHHH
T ss_pred ccchhhhhhhhhhcccchhhhhhhhcceeeeecccc-c----HHHHHHHHHHhhhccceeeeccceeeccCC-CchHHHH
Confidence 0 000000000000 0 011222333333344556666778999998 9999999
Q ss_pred HHHHHHH--hcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCC
Q psy2719 750 SIHILRT--MYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSS 792 (808)
Q Consensus 750 v~~ll~~--~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~ 792 (808)
++.|++. .+|++.+ +++||| |++||++++ ++|+|.|+
T Consensus 189 ~~~l~~~~~~l~i~~~---~~iafGD~~NDl~Ml~~a~---~~vaV~n~ 231 (232)
T d1xvia_ 189 ANWIIATYQQLSGKRP---TTLGLGDGPNDAPLLEVMD---YAVIVKGL 231 (232)
T ss_dssp HHHHHHHHHHHHSSCC---EEEEEESSGGGHHHHHTSS---EEEECCCC
T ss_pred HHHHHHHHHHcCCChh---cEEEEcCCHhHHHHHHhCC---eEEEEeCC
Confidence 9999974 2578865 799999 999999994 56999874
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.70 E-value=4e-17 Score=157.39 Aligned_cols=140 Identities=17% Similarity=0.247 Sum_probs=109.2
Q ss_pred eEEEEEcCccccCChHHHHHHHHHHHHhCCCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCCCCccEEE
Q psy2719 312 KVILGVDRLDYTKGLVHRIKAFERLLEKHPEYVEKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKPNWSPIRY 391 (808)
Q Consensus 312 ~iil~V~Rl~~~KGi~~~l~A~~~ll~~~p~~~~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~~~~~v~~ 391 (808)
.++++|||+.+.||++.+++|++++ |+.+ |+++|.++. .+.++.+.+++.+. .. ..|++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~~--~~~~~~~~~~~~~~----~~-------~~v~~ 71 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFSK--GDHAERYARKIMKI----AP-------DNVKF 71 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCCT--TSTHHHHHHHHHHH----SC-------TTEEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCe----EEEEEeccc--ccchhhhhhhhccc----cc-------CcEEE
Confidence 4688999999999999999999765 4442 666665432 23344444444332 11 14554
Q ss_pred EcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCCccccC---ceEEECCCCHHHHHHHH
Q psy2719 392 IFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGAGGMMH---EALLVNPYEIDAAANVL 468 (808)
Q Consensus 392 ~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l~---~~llvnP~d~~~lA~ai 468 (808)
.|.++.+++..+|+.||++++||..||||++++|||+|+ .|+|+|..+|..+.+. +|+++++ |+++++++|
T Consensus 72 -~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g----~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i 145 (166)
T d2f9fa1 72 -LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG----KPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAM 145 (166)
T ss_dssp -EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT----CCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHH
T ss_pred -eeccccccccccccccccccccccccccccccccccccc----ccceeecCCcceeeecCCcccccCCC-CHHHHHHHH
Confidence 589999999999999999999999999999999999996 5699999988888773 4887766 999999999
Q ss_pred HHHhCCCHHH
Q psy2719 469 HRALCMPRDE 478 (808)
Q Consensus 469 ~~~L~~~~~e 478 (808)
.+++++++..
T Consensus 146 ~~l~~~~~~~ 155 (166)
T d2f9fa1 146 KKVSKNPDKF 155 (166)
T ss_dssp HHHHHCTTTT
T ss_pred HHHHhCHHHH
Confidence 9999986533
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=2.7e-18 Score=192.49 Aligned_cols=102 Identities=25% Similarity=0.522 Sum_probs=82.1
Q ss_pred CCchhHhhHHHHhcCCcEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeEEcChhhhhhhccccCCcccccccc
Q psy2719 1 AGGLVTAVAPVVIDCKGIWIGWSGLYDLAPDEVIPEADPNDQAPTSGLTSSQVIPVHVDKDEFEAYYNGCCNGTFWPLFH 80 (808)
Q Consensus 1 ~GGL~~al~~~~~~~~g~WvGw~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~yY~Gf~n~~LWPl~H 80 (808)
+|||++||.+++++.+|+||||+|...++. .+. .......+++.||+|+++++++||+||||++|||+||
T Consensus 20 ~gGl~~al~~~~~~~~g~Wvgw~g~~~~~~-------~~~---~~~~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWpl~H 89 (456)
T d1uqta_ 20 AGGLAVGILGALKAAGGLWFGWSGETGNED-------QPL---KKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFH 89 (456)
T ss_dssp CCHHHHHHHHHHHHHCEEEEEEEEEESCCS-------SCC---EEEEETTEEEEEEEECHHHHHHHTTTHHHHTHHHHHT
T ss_pred CccHHHHhHHHHhhCCCEEEecCCCCCccc-------chh---hhhhccCceeEEecCCHHHHHHHHHHhhhcccccccc
Confidence 699999999999999999999999654321 111 1112346899999999999999999999999999999
Q ss_pred cCccccccCcccchhhhhhccc--------cccccceeeee
Q psy2719 81 SMPDRAVFNAETWKVSHLKMNG--------VTLEITGIWIG 113 (808)
Q Consensus 81 ~~~~~~~~~~~~w~~y~~k~~g--------~~~~~~~~wig 113 (808)
|+++...|++.+|+.|.. +|. .......+||-
T Consensus 90 ~~~~~~~~~~~~~~~Y~~-vN~~fA~~l~~~~~~~d~iwvh 129 (456)
T d1uqta_ 90 YRLDLVQFQRPAWDGYLR-VNALLADKLLPLLQDDDIIWIH 129 (456)
T ss_dssp TCGGGCCCCHHHHHHHHH-HHHHHHHHHGGGCCTTCEEEEE
T ss_pred CccccccccHHHHHHHHH-HHHHHHHHHHHhccCCCeEEEe
Confidence 999999999999999973 222 23445677876
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.79 E-value=6.2e-11 Score=115.89 Aligned_cols=57 Identities=14% Similarity=0.117 Sum_probs=43.4
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccc-cccccccCcC
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVK-SSWKQGSNHT 806 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk-~~A~~~~~~~ 806 (808)
...|+...+.++++ ++++.+ +++||| |++||+.|+ ++|||++.+++| ++|+|++.++
T Consensus 127 ~~~~~~~~~~~~~~-~~i~~~---eviaiGDg~NDi~Ml~~Ag---~gIAmna~~~v~~~~~~~~~~~~ 188 (206)
T d1rkua_ 127 QLRQKDPKRQSVIA-FKSLYY---RVIAAGDSYNDTTMLSEAH---AGILFHAPENVIREFPQFPAVHT 188 (206)
T ss_dssp ECCSSSHHHHHHHH-HHHTTC---EEEEEECSSTTHHHHHHSS---EEEEESCCHHHHHHCTTSCEECS
T ss_pred cccchhhHHHHHHH-hccccc---ceEEecCCccCHHHHHhCC---ccEEECCCHHHHHhCCCceeecC
Confidence 34566667777775 788765 899999 999999994 459996666666 6668887665
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.68 E-value=1.5e-05 Score=75.69 Aligned_cols=61 Identities=20% Similarity=0.214 Sum_probs=52.6
Q ss_pred EeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCcC
Q psy2719 738 AKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNHT 806 (808)
Q Consensus 738 v~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~~ 806 (808)
+... ..+|..+++.++++ ++++++ +|++|| |.+||+.+ |++++|+| .+++|+.|+|||+++
T Consensus 74 ~~~~-~~~K~~~l~~~~~~-~~i~~~---~v~~vGDd~nDl~~l~~~---g~siap~nA~~~vk~~A~~Vt~~~ 139 (177)
T d1k1ea_ 74 FFLG-KLEKETACFDLMKQ-AGVTAE---QTAYIGDDSVDLPAFAAC---GTSFAVADAPIYVKNAVDHVLSTH 139 (177)
T ss_dssp EEES-CSCHHHHHHHHHHH-HTCCGG---GEEEEECSGGGHHHHHHS---SEEEECTTSCHHHHTTSSEECSSC
T ss_pred cccc-cccHHHHHHHHHHH-hcCCcc---eeEEecCCccHHHHHhhC---CeEEEcCCccHHHHHhCCEEeCCC
Confidence 3444 67999999999997 899986 899999 99999999 46799997 689999999999864
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.28 E-value=0.00016 Score=65.70 Aligned_cols=40 Identities=25% Similarity=0.309 Sum_probs=28.6
Q ss_pred CCceEEEEecccccccCCCCC-------CccCCCHHHHHHHHHHhcC
Q psy2719 541 NCKLSLILDYDGTLTPLTSHP-------DLAVMSEETKRVLERLANM 580 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~~-------~~~~i~~~~~~~L~~L~~~ 580 (808)
++.+.|+||+||||+...... ....+-+.+.++|+.|.++
T Consensus 5 ~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~ 51 (149)
T d1ltqa1 5 GKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALM 51 (149)
T ss_dssp TSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHT
T ss_pred CCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHHHhc
Confidence 466899999999998753321 1234567788888888776
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.19 E-value=0.00011 Score=70.07 Aligned_cols=64 Identities=9% Similarity=0.061 Sum_probs=52.3
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCCCccccccccccCcC
Q psy2719 735 AIEAKPPVKWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSSPTVKSSWKQGSNHT 806 (808)
Q Consensus 735 ~vEv~p~~~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~~~vk~~A~~~~~~~ 806 (808)
..+..+. +..|+.++..++++ ++++++ ++++|| |++|++++| ++|||.+.+.+|+.|+|++.++
T Consensus 133 ~~~~~~~-~~~~~~~~~~~~~~-~~~~~~---~~i~iGDs~nDi~m~~~ag---~~va~na~~~lk~~Ad~vi~~~ 200 (210)
T d1j97a_ 133 VEGEVLK-ENAKGEILEKIAKI-EGINLE---DTVAVGDGANDISMFKKAG---LKIAFCAKPILKEKADICIEKR 200 (210)
T ss_dssp EECSSCS-TTHHHHHHHHHHHH-HTCCGG---GEEEEESSGGGHHHHHHCS---EEEEESCCHHHHTTCSEEECSS
T ss_pred ccccccc-cccccchhhhHHHH-hccccc---ceEEecCCcChHHHHHHCC---CCEEECCCHHHHHhCCEEEcCC
Confidence 3444555 77899999999986 788875 799999 999999995 4589955789999999999863
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.86 E-value=0.00053 Score=60.38 Aligned_cols=50 Identities=22% Similarity=0.230 Sum_probs=39.3
Q ss_pred EEEEecccccccCCCCCCccCCCHHHHHHHHHHhcCCCCccccccccccccccCCCCcccchHHHHHHHHHHhCCCCCeE
Q psy2719 545 SLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANMPDVNIGIISGRTLENLRHHPDLAVMSEETKRVLERLANMPDVNI 624 (808)
Q Consensus 545 li~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~~~~~~~~~sgr~~~~l~~~~~~~~~~~~~~~~l~~l~~~pg~~v 624 (808)
-|++|+||||..... ++...+-+.+++.|++|.+. |+.|
T Consensus 2 ti~vDiDGTl~~~~~-~~~~kPi~~~Ie~l~~L~~~----------------------------------------G~~I 40 (122)
T d2obba1 2 TIAVDFDGTIVEHRY-PRIGEEIPFAVETLKLLQQE----------------------------------------KHRL 40 (122)
T ss_dssp EEEECCBTTTBCSCT-TSCCCBCTTHHHHHHHHHHT----------------------------------------TCEE
T ss_pred EEEEEcCCCcCCCCC-CccccccHHHHHHHHHHHHC----------------------------------------CCeE
Confidence 379999999987543 34455667889999999887 9999
Q ss_pred EEEeCCChhhH
Q psy2719 625 GIISGRTLENL 635 (808)
Q Consensus 625 ~I~SGR~~~~l 635 (808)
+|.|+|+-...
T Consensus 41 Ii~TaR~~~~~ 51 (122)
T d2obba1 41 ILWSVREGELL 51 (122)
T ss_dssp EECCSCCHHHH
T ss_pred EEEecCCCcch
Confidence 99999986443
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=96.59 E-value=0.0011 Score=58.37 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=27.6
Q ss_pred EEEEecccccccCCCC-CCccCCCHHHHHHHHHHhcC
Q psy2719 545 SLILDYDGTLTPLTSH-PDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 545 li~~D~DGTLl~~~~~-~~~~~i~~~~~~~L~~L~~~ 580 (808)
-|++|+||||...... .+...+-+.+++.|+.|.+.
T Consensus 3 ~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~ 39 (124)
T d1xpja_ 3 KLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQL 39 (124)
T ss_dssp EEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHT
T ss_pred EEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHHHHC
Confidence 4899999999875322 23456778999999999887
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.26 E-value=0.0014 Score=65.00 Aligned_cols=53 Identities=13% Similarity=0.140 Sum_probs=36.7
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEeC----CCC---ccccccccccCc
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRVD----SSP---TVKSSWKQGSNH 805 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~----~~~---~vk~~A~~~~~~ 805 (808)
....+.++++ +|++++ ++++|| |+.|.+.+| .- |+.|. ..+ ..+..++|+++|
T Consensus 183 ~~~~~~~~~~-~gi~~~---~~l~IGD~~~~DI~~a~~aG-~~-si~V~~G~~~~~~~~~~~~~Pd~vi~s 247 (253)
T d1yv9a1 183 AIIMERAIAH-LGVEKE---QVIMVGDNYETDIQSGIQNG-ID-SLLVTSGFTPKSAVPTLPTPPTYVVDS 247 (253)
T ss_dssp HHHHHHHHHH-HCSCGG---GEEEEESCTTTHHHHHHHHT-CE-EEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred hhHHHHHHHH-hCCCcc---ceEEecCChHHHHHHHHHCC-CC-EEEECCCCCCHHHHHhcCCCCCEEECC
Confidence 3446778886 899875 899999 888888885 32 57774 123 334445888876
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.89 E-value=0.0031 Score=58.13 Aligned_cols=15 Identities=33% Similarity=0.381 Sum_probs=12.7
Q ss_pred ceEEEEecccccccC
Q psy2719 543 KLSLILDYDGTLTPL 557 (808)
Q Consensus 543 ~rli~~D~DGTLl~~ 557 (808)
.|+|+||+||||.+.
T Consensus 5 pK~viFDlDGTL~d~ 19 (164)
T d1u7pa_ 5 PKLAVFDLDYTLWPF 19 (164)
T ss_dssp CSEEEECCBTTTBSS
T ss_pred CCEEEEcCCCcccCC
Confidence 368999999999863
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=95.81 E-value=0.0031 Score=62.35 Aligned_cols=53 Identities=11% Similarity=-0.129 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEeC---C-CCccc---cccccccCc
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRVD---S-SPTVK---SSWKQGSNH 805 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~---~-~~~vk---~~A~~~~~~ 805 (808)
....+.++++ +|++++ ++++|| |+.|.+++| . -|+.|. . .+++. ..++|+++|
T Consensus 179 p~~~~~a~~~-lgi~p~---e~v~IGD~~~~DI~~a~~aG-~-~tilV~~G~~~~~~l~~~~~~pd~i~~s 243 (250)
T d2c4na1 179 PWIIRAALNK-MQAHSE---ETVIVGDNLRTDILAGFQAG-L-ETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp THHHHHHHHH-HTCCGG---GEEEEESCTTTHHHHHHHTT-C-EEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred hhhHhhhhhh-hcCCch---heEEecCChHHHHHHHHHCC-C-CEEEECCCCCCHHHHHhCCCCCCEEECC
Confidence 4577888886 899876 899999 788888886 3 256664 1 23333 335788775
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=95.64 E-value=0.0039 Score=57.50 Aligned_cols=38 Identities=24% Similarity=0.219 Sum_probs=27.0
Q ss_pred ceEEEEecccccccCCCC------CCccCCCHHHHHHHHHHhcC
Q psy2719 543 KLSLILDYDGTLTPLTSH------PDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~------~~~~~i~~~~~~~L~~L~~~ 580 (808)
+++||||.||||...... ++...+-|.+.++|++|+++
T Consensus 2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~ 45 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKA 45 (161)
T ss_dssp CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHT
T ss_pred CcEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHHHHc
Confidence 578999999999874321 12234567888889998887
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=95.48 E-value=0.005 Score=61.03 Aligned_cols=32 Identities=28% Similarity=0.271 Sum_probs=25.0
Q ss_pred ceEEEEecccccccCCCCCCccCCCHHHHHHHHHHhcC
Q psy2719 543 KLSLILDYDGTLTPLTSHPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 543 ~rli~~D~DGTLl~~~~~~~~~~i~~~~~~~L~~L~~~ 580 (808)
-++++||+||||++. ...+ +.+.++|++|+++
T Consensus 7 ik~vlFDlDGTL~~~-----~~~i-~~a~e~l~~l~~~ 38 (261)
T d1vjra_ 7 IELFILDMDGTFYLD-----DSLL-PGSLEFLETLKEK 38 (261)
T ss_dssp CCEEEECCBTTTEET-----TEEC-TTHHHHHHHHHHT
T ss_pred CCEEEEeCCCeeEEC-----CccC-chHHHHHHHHHHc
Confidence 468999999999973 2234 5678899999887
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.01 E-value=0.02 Score=50.82 Aligned_cols=36 Identities=17% Similarity=0.134 Sum_probs=22.5
Q ss_pred eEEEEe----CHHHHHhccCCccEEEeCC-CCccccccccccCc
Q psy2719 767 RIIYAG----NEDAMLALQGIACTFRVDS-SPTVKSSWKQGSNH 805 (808)
Q Consensus 767 ~via~G----D~~Mf~~~~~~~~~vav~~-~~~vk~~A~~~~~~ 805 (808)
.++++| |.+||+++. . +++|++ .+-+|++||.++-+
T Consensus 84 ~v~~vGDg~nD~~aL~~Ad-v--gia~~~~~~~~~~aADivl~~ 124 (135)
T d2b8ea1 84 VVAFVGDGINDAPALAQAD-L--GIAVGSGSDVAVESGDIVLIR 124 (135)
T ss_dssp CEEEEECSSSSHHHHHHSS-E--EEEECCC--------SEEESS
T ss_pred EEEEEeCCCCcHHHHHhCC-e--eeecCccCHHHHHhCCEEEEC
Confidence 478888 999999994 4 488886 56689999998764
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=94.82 E-value=0.012 Score=56.52 Aligned_cols=15 Identities=33% Similarity=0.614 Sum_probs=13.4
Q ss_pred ceEEEEecccccccC
Q psy2719 543 KLSLILDYDGTLTPL 557 (808)
Q Consensus 543 ~rli~~D~DGTLl~~ 557 (808)
|+||+||+||||++.
T Consensus 2 ~klviFD~DGTL~d~ 16 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKV 16 (228)
T ss_dssp CEEEEECCBTTTEEE
T ss_pred ceEEEEeCCCCcccC
Confidence 679999999999883
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=94.24 E-value=0.016 Score=54.18 Aligned_cols=37 Identities=22% Similarity=0.253 Sum_probs=27.0
Q ss_pred eEEEEecccccccCCC---CCCccCCCHHHHHHHHHHhcC
Q psy2719 544 LSLILDYDGTLTPLTS---HPDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 544 rli~~D~DGTLl~~~~---~~~~~~i~~~~~~~L~~L~~~ 580 (808)
+.+|||.||||..... .+++-++-+.+.++|++|++.
T Consensus 3 ~Av~~DrDGtl~~~~~y~~~~~~~~~~~gv~e~l~~L~~~ 42 (182)
T d2gmwa1 3 PAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKM 42 (182)
T ss_dssp CEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHT
T ss_pred CEEEEeCCCCccCCCCCCCCHHHeeECCCHHHHHHHHhhc
Confidence 5799999999975322 223345667888999999887
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=93.84 E-value=0.018 Score=56.63 Aligned_cols=53 Identities=19% Similarity=0.093 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhcCCCCCcceeEEEEe-----CHHHHHhccCCccEEEeC----CCCccccc---cccccCc
Q psy2719 747 GRASIHILRTMYGVDWSERVRIIYAG-----NEDAMLALQGIACTFRVD----SSPTVKSS---WKQGSNH 805 (808)
Q Consensus 747 G~av~~ll~~~~~i~~~~~~~via~G-----D~~Mf~~~~~~~~~vav~----~~~~vk~~---A~~~~~~ 805 (808)
-...+.++++ +|++++ +++++| |+.|-+.+| + -|+.|. +.++++.. .||+++|
T Consensus 183 p~~~~~al~~-l~i~~~---~~~mIGDs~~~DI~gA~~aG-~-~si~V~~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 183 AVIMNKALDR-LGVKRH---EAIMVGDNYLTDITAGIKND-I-ATLLVTTGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp HHHHHHHHHH-HTSCGG---GEEEEESCTTTTHHHHHHTT-C-EEEEESSSSSCTTTGGGCSSCCSEEESC
T ss_pred cccceehhhh-cccccc---ceEEEcCChHHHHHHHHHCC-C-CEEEECCCCCCHHHHhhcCCCCCEEECC
Confidence 4567788886 899875 799999 677777775 2 267775 23444443 3777665
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.52 E-value=0.028 Score=53.07 Aligned_cols=40 Identities=28% Similarity=0.274 Sum_probs=27.9
Q ss_pred CCceEEEEecccccccCCC---C---CCcc-CCCHHHHHHHHHHhcC
Q psy2719 541 NCKLSLILDYDGTLTPLTS---H---PDLA-VMSEETKRVLERLANM 580 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~---~---~~~~-~i~~~~~~~L~~L~~~ 580 (808)
.++++++||.||||....+ . +.+- .+.+.+.++|++|.++
T Consensus 19 ~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~~~ 65 (195)
T d1yj5a1 19 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE 65 (195)
T ss_dssp CCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHHHH
T ss_pred CcCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHHHhC
Confidence 3457889999999975322 1 1121 2468889999999887
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=93.47 E-value=0.0099 Score=57.05 Aligned_cols=41 Identities=17% Similarity=0.125 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCC
Q psy2719 744 WDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDS 791 (808)
Q Consensus 744 v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~ 791 (808)
..|+.+++.+++. ++++.. +++++| |+.|++.|+ +++|++.
T Consensus 144 ~~k~~~~~~~~~~-~~~~~~---~~i~iGDs~~Dl~~a~~A~---~~~a~~~ 188 (226)
T d2feaa1 144 NQCGCCKPSVIHE-LSEPNQ---YIIMIGDSVTDVEAAKLSD---LCFARDY 188 (226)
T ss_dssp SCCSSCHHHHHHH-HCCTTC---EEEEEECCGGGHHHHHTCS---EEEECHH
T ss_pred cCCHHHHHHHHHH-hcCCCc---eEEEEeCchhhHHHHHHCC---EEEEecc
Confidence 3466666777776 787765 799999 999999985 4588874
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=93.09 E-value=0.023 Score=54.45 Aligned_cols=40 Identities=23% Similarity=0.223 Sum_probs=29.1
Q ss_pred CCceEEEEecccccccCCCC---CCccCCCHHHHHHHHHHhcC
Q psy2719 541 NCKLSLILDYDGTLTPLTSH---PDLAVMSEETKRVLERLANM 580 (808)
Q Consensus 541 ~~~rli~~D~DGTLl~~~~~---~~~~~i~~~~~~~L~~L~~~ 580 (808)
.+...||||.||||...... +++-++-+.+.++|++|+++
T Consensus 21 ~~~~Aif~DrDGtl~~~~~y~~~~~~~~l~pgv~e~L~~L~~~ 63 (209)
T d2o2xa1 21 PHLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRA 63 (209)
T ss_dssp SSCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCeECCCCCCCCHHHeEecccHHHHHHHHHhh
Confidence 34568999999999764332 22345667888999999887
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=92.18 E-value=0.15 Score=52.07 Aligned_cols=102 Identities=14% Similarity=0.101 Sum_probs=63.3
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCCC--------cccc---CceEEECCC
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAGA--------GGMM---HEALLVNPY 459 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G~--------~~~l---~~~llvnP~ 459 (808)
.+.+++++.+ +++.+|+||..+ |. -+..|||++++ |+|+.-..+- ++.+ +.|+.+++.
T Consensus 273 ~i~~~~p~~~---ll~~a~~~v~hg---G~-~t~~Eal~~G~----P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~ 341 (391)
T d1pn3a_ 273 FVVGEVNLQE---LFGRVAAAIHHD---SA-GTTLLAMRAGI----PQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGP 341 (391)
T ss_dssp CEESSCCHHH---HHTTSSCEEEES---CH-HHHHHHHHHTC----CEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCS
T ss_pred EEecccCHHH---HHhhccEEEecC---ch-HHHHHHHHhCC----cEEEeccccCCcchHHHHHHHHHHCCCEEEcCcC
Confidence 3567888765 478899999764 44 47889999975 4666555442 2222 248888776
Q ss_pred C--HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 460 E--IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 460 d--~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
+ +++++++|.++|+.+ -+++.+++.+.++......=++.+.+.|
T Consensus 342 ~~~~~~l~~~i~~~l~~~---~r~~a~~~a~~~~~~g~~~aa~~i~~~l 387 (391)
T d1pn3a_ 342 VPTIDSLSAALDTALAPE---IRARATTVADTIRADGTTVAAQLLFDAV 387 (391)
T ss_dssp SCCHHHHHHHHHHHTSTT---HHHHHHHHGGGSCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCHH---HHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 5 899999999999632 2334444444454433333333333333
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=91.66 E-value=0.31 Score=49.51 Aligned_cols=103 Identities=14% Similarity=0.133 Sum_probs=64.3
Q ss_pred EEEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCC----Ccccc---CceEEECCC--C
Q psy2719 390 RYIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAG----AGGMM---HEALLVNPY--E 460 (808)
Q Consensus 390 ~~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G----~~~~l---~~~llvnP~--d 460 (808)
+.+.+++++.+ +|..+|+|| .-|-..++.|++++++| +|+--..+ .+..+ +.|+.+++. +
T Consensus 287 v~~~~~~p~~~---~l~~~~~~V----~hgG~~t~~Eal~~GvP----~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~ 355 (401)
T d1iira_ 287 CFAIGEVNHQV---LFGRVAAVI----HHGGAGTTHVAARAGAP----QILLPQMADQPYYAGRVAELGVGVAHDGPIPT 355 (401)
T ss_dssp EEECSSCCHHH---HGGGSSEEE----ECCCHHHHHHHHHHTCC----EEECCCSTTHHHHHHHHHHHTSEEECSSSSCC
T ss_pred EEEEeccCHHH---HHhhcCEEE----ecCCchHHHHHHHhCCC----EEEccccccHHHHHHHHHHCCCEEEcCcCCCC
Confidence 34567888754 578899998 35777888899999754 55544433 12222 248888775 6
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHHHHHH
Q psy2719 461 IDAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSFLSSM 506 (808)
Q Consensus 461 ~~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 506 (808)
+++++++|.++|+ ++ -+++.+.+.+.++......=++.+++.+
T Consensus 356 ~~~l~~ai~~~l~--~~-~~~~a~~~~~~~~~~~~~~aa~~i~~~i 398 (401)
T d1iira_ 356 FDSLSAALATALT--PE-THARATAVAGTIRTDGAAVAARLLLDAV 398 (401)
T ss_dssp HHHHHHHHHHHTS--HH-HHHHHHHHHHHSCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC--HH-HHHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 8999999999995 33 3344444444454433333344443333
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=91.55 E-value=0.3 Score=49.84 Aligned_cols=98 Identities=9% Similarity=0.080 Sum_probs=63.4
Q ss_pred EEcCCCCHHHHHHHHHhcCeEEECCCCCCCChhHHHHHHhccCCCceEEEcCCCC----Ccccc---CceEEECCC--CH
Q psy2719 391 YIFGCIGQEELAALYRDSAIALVTPLRDGMNLVAKEYVACQIREPGVLILSPFAG----AGGMM---HEALLVNPY--EI 461 (808)
Q Consensus 391 ~~~~~v~~~el~aly~~Adv~v~~S~~EG~gLv~~Eama~~~~~~g~vVlS~~~G----~~~~l---~~~llvnP~--d~ 461 (808)
.+.+++++.++ +..+|+||. .|-..+..||+++++| +|+.-+.+ .+..+ +-|+.+++. ++
T Consensus 289 ~~~~~~p~~~l---l~~~~~~I~----hgG~~t~~Eal~~GvP----~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~~~ 357 (401)
T d1rrva_ 289 FAIDEVNFQAL---FRRVAAVIH----HGSAGTEHVATRAGVP----QLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTF 357 (401)
T ss_dssp EEESSCCHHHH---GGGSSEEEE----CCCHHHHHHHHHHTCC----EEECCCSBTHHHHHHHHHHHTSEEECSSSCCCH
T ss_pred EEEeccCcHHH---hhhccEEEe----cCCchHHHHHHHhCCC----EEEecccccHHHHHHHHHHCCCEEEcCcCCCCH
Confidence 45678887655 678999984 6666788999999754 56555444 12222 248888885 48
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHhHHHhcCCHHHHHHHH
Q psy2719 462 DAAANVLHRALCMPRDERELRMSQLRHREQQLDVNHWMNSF 502 (808)
Q Consensus 462 ~~lA~ai~~~L~~~~~e~~~r~~~~~~~v~~~~~~~W~~~~ 502 (808)
+.++++|.++|+ ++ .+++.++..+.+.......=++..
T Consensus 358 ~~L~~ai~~vl~--~~-~r~~a~~~~~~~~~~g~~~aa~~i 395 (401)
T d1rrva_ 358 ESLSAALTTVLA--PE-TRARAEAVAGMVLTDGAAAAADLV 395 (401)
T ss_dssp HHHHHHHHHHTS--HH-HHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhC--HH-HHHHHHHHHHHHhhcCHHHHHHHH
Confidence 999999999985 33 444555555555444444433333
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=90.86 E-value=0.054 Score=51.12 Aligned_cols=15 Identities=33% Similarity=0.268 Sum_probs=13.0
Q ss_pred CceEEEEeccccccc
Q psy2719 542 CKLSLILDYDGTLTP 556 (808)
Q Consensus 542 ~~rli~~D~DGTLl~ 556 (808)
+-++|+||+||||++
T Consensus 3 ~~k~iiFD~DGTL~D 17 (224)
T d2hsza1 3 QFKLIGFDLDGTLVN 17 (224)
T ss_dssp SCSEEEECSBTTTEE
T ss_pred CCCEEEEeCCCCccc
Confidence 347899999999997
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.73 E-value=0.05 Score=52.03 Aligned_cols=54 Identities=15% Similarity=0.155 Sum_probs=39.8
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcceeEEEEe----CHHHHHhccCCccEEEeCCC---CccccccccccCc
Q psy2719 743 KWDQGRASIHILRTMYGVDWSERVRIIYAG----NEDAMLALQGIACTFRVDSS---PTVKSSWKQGSNH 805 (808)
Q Consensus 743 ~v~KG~av~~ll~~~~~i~~~~~~~via~G----D~~Mf~~~~~~~~~vav~~~---~~vk~~A~~~~~~ 805 (808)
+..|+..++.+.+. .+++ +++++| |+.|++.++ +.|+|+.. +.+++.|+++..+
T Consensus 151 ~~~K~~~v~~~~~~-~~~~-----~~~~vGDs~~Di~~~~~ag---~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 151 SGGKGKVIKLLKEK-FHFK-----KIIMIGDGATDMEACPPAD---AFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp TTHHHHHHHHHHHH-HCCS-----CEEEEESSHHHHTTTTTSS---EEEEECSSCCCHHHHHHCSEEESC
T ss_pred cchHHHHHHHHHhc-cCcc-----ccEEEEeCHhhHHHHHhCC---ceEEECCCHHHHHHHHhCCCEeCC
Confidence 34699999988664 4543 699999 999999995 45888842 4566778887654
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=90.13 E-value=0.11 Score=48.51 Aligned_cols=13 Identities=54% Similarity=0.805 Sum_probs=11.7
Q ss_pred eEEEEeccccccc
Q psy2719 544 LSLILDYDGTLTP 556 (808)
Q Consensus 544 rli~~D~DGTLl~ 556 (808)
++|+||+||||++
T Consensus 4 k~viFD~DGTL~d 16 (207)
T d2hdoa1 4 QALMFDIDGTLTN 16 (207)
T ss_dssp SEEEECSBTTTEE
T ss_pred cEEEEeCCCCcCc
Confidence 5789999999997
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=88.82 E-value=0.068 Score=49.61 Aligned_cols=15 Identities=33% Similarity=0.541 Sum_probs=13.6
Q ss_pred CceEEEEeccccccc
Q psy2719 542 CKLSLILDYDGTLTP 556 (808)
Q Consensus 542 ~~rli~~D~DGTLl~ 556 (808)
++|+++||+||||++
T Consensus 3 kkKlv~FDlDGTL~d 17 (210)
T d1j97a_ 3 KKKLILFDFDSTLVN 17 (210)
T ss_dssp CCCEEEECCCCCCBS
T ss_pred CCeEEEEeCCCCcCC
Confidence 468999999999997
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=87.42 E-value=0.18 Score=46.43 Aligned_cols=20 Identities=25% Similarity=0.537 Sum_probs=15.8
Q ss_pred CCeEEEEeCCChhhHHHhcC
Q psy2719 621 DVNIGIISGRTLENLMKMVN 640 (808)
Q Consensus 621 g~~v~I~SGR~~~~l~~~~~ 640 (808)
|+.++++||+..........
T Consensus 48 gi~~~iis~~~~~~v~~~~~ 67 (177)
T d1k1ea_ 48 DIQVAVLSGRDSPILRRRIA 67 (177)
T ss_dssp TCEEEEEESCCCHHHHHHHH
T ss_pred cEEEEEecCCchhHHHHHHh
Confidence 89999999998777665543
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=86.18 E-value=0.15 Score=47.93 Aligned_cols=30 Identities=17% Similarity=0.286 Sum_probs=18.6
Q ss_pred HHHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 609 TKRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 609 ~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
+.+.|+.|.+ .|+.++|+|+.+...+...+
T Consensus 93 ~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l 122 (218)
T d1te2a_ 93 VREAVALCKE-QGLLVGLASASPLHMLEKVL 122 (218)
T ss_dssp HHHHHHHHHH-TTCEEEEEESSCHHHHHHHH
T ss_pred HHHHHHHhhh-cccccccccccccccccccc
Confidence 4455655544 37788888887766555444
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=85.08 E-value=0.46 Score=45.65 Aligned_cols=32 Identities=25% Similarity=0.334 Sum_probs=23.6
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeCCChhhHHHhc
Q psy2719 607 EETKRVLERLANMPDVNIGIISGRTLENLMKMV 639 (808)
Q Consensus 607 ~~~~~~l~~l~~~pg~~v~I~SGR~~~~l~~~~ 639 (808)
+-+.++|+.|.+. |+.++|+||.+...+...+
T Consensus 102 ~g~~~~L~~Lk~~-g~~i~i~Tn~~~~~~~~~l 133 (257)
T d1swva_ 102 NGVKEVIASLRER-GIKIGSTTGYTREMMDIVA 133 (257)
T ss_dssp TTHHHHHHHHHHT-TCEEEEBCSSCHHHHHHHH
T ss_pred CcHHHHHHHHHhc-ccceeecCCCchhhHHHHH
Confidence 3456778888763 8999999999876665444
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=84.64 E-value=0.25 Score=45.32 Aligned_cols=27 Identities=22% Similarity=0.198 Sum_probs=20.6
Q ss_pred HHHHHHHHHhCCCCCeEEEEeCCChhhH
Q psy2719 608 ETKRVLERLANMPDVNIGIISGRTLENL 635 (808)
Q Consensus 608 ~~~~~l~~l~~~pg~~v~I~SGR~~~~l 635 (808)
.+.+.|+.|.+. |+.++|+|+.+...+
T Consensus 83 gv~~~l~~l~~~-g~~~~i~Sn~~~~~~ 109 (187)
T d2fi1a1 83 GVSDLLEDISNQ-GGRHFLVSHRNDQVL 109 (187)
T ss_dssp THHHHHHHHHHT-TCEEEEECSSCTHHH
T ss_pred hhHHHHHHHHhh-hccccccccCccchh
Confidence 357778888764 899999999876544
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=84.43 E-value=0.26 Score=46.43 Aligned_cols=28 Identities=14% Similarity=0.071 Sum_probs=19.1
Q ss_pred hhHHHHhhhhcCCCceEEEEecccccccC
Q psy2719 529 DFDLYLNNYVDGNCKLSLILDYDGTLTPL 557 (808)
Q Consensus 529 ~~~~~~~~y~~~~~~rli~~D~DGTLl~~ 557 (808)
.+.++.+.+.. .+...|+||+|-|+|+.
T Consensus 22 ~~~~i~~~~~g-~~P~AIifDIDETvLdn 49 (209)
T d2b82a1 22 SVAQIENSLAG-RPPMAVGFDIDDTVLFS 49 (209)
T ss_dssp CHHHHHHHTTT-CCCCEEEECCBTTTEEC
T ss_pred EHHHHHHhcCC-CCCceEEEcchhhhhcC
Confidence 44555565543 33458999999999984
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.63 E-value=0.29 Score=46.35 Aligned_cols=14 Identities=21% Similarity=0.204 Sum_probs=11.7
Q ss_pred eEEEEecccccccC
Q psy2719 544 LSLILDYDGTLTPL 557 (808)
Q Consensus 544 rli~~D~DGTLl~~ 557 (808)
+.|+||+||||++.
T Consensus 11 ~aV~FD~DGTLi~~ 24 (217)
T d1nnla_ 11 DAVCFDVDSTVIRE 24 (217)
T ss_dssp SEEEEETBTTTBSS
T ss_pred CEEEEcCccccCCc
Confidence 46889999999973
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=81.50 E-value=26 Score=38.71 Aligned_cols=148 Identities=11% Similarity=0.082 Sum_probs=97.7
Q ss_pred CCCeEEEEEcCccccCChHHHHHHHHHH---HHhCCCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCCC
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKAFERL---LEKHPEYV-EKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSKP 384 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A~~~l---l~~~p~~~-~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~~ 384 (808)
++..+++++-|+..-|-....+.-..++ ++..|+.. ..+.+|..|.+.+++.+. +++-+.|.+++..+|..=-..
T Consensus 524 p~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~g-K~iIk~I~~va~~in~dp~~~ 602 (796)
T d1l5wa_ 524 PQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLA-KNIIFAINKVADVINNDPLVG 602 (796)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHH-HHHHHHHHHHHHHHHTCTTTG
T ss_pred hhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHH-HHHHHHHHHHHHHhcCChhhc
Confidence 4677899999999999988866655443 34444321 247788777766555433 355566777777776421011
Q ss_pred CCccEEEEcCCCCHHHHHHHHHhcCeEEECCC--CCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----C--ceEEE
Q psy2719 385 NWSPIRYIFGCIGQEELAALYRDSAIALVTPL--RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----H--EALLV 456 (808)
Q Consensus 385 ~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~--~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~--~~llv 456 (808)
+.-.|+|+ ...+-+--..+..+|||-+.+|. .|.=|..-+=||.- |++.+|..-|.--++ + +++++
T Consensus 603 ~~~kVVFl-enYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalN-----G~lnlstlDGw~vE~~~~vg~eN~f~f 676 (796)
T d1l5wa_ 603 DKLKVVFL-PDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIF 676 (796)
T ss_dssp GGEEEEEC-SSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEEC
T ss_pred cceeEEEe-CCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHc-----CCeeeecccchHHHHHHhcCccceEEe
Confidence 12246665 45566656678999999999997 57777777777663 889999999985554 1 47877
Q ss_pred CCCCHHHH
Q psy2719 457 NPYEIDAA 464 (808)
Q Consensus 457 nP~d~~~l 464 (808)
- .+.+++
T Consensus 677 G-~~~~ev 683 (796)
T d1l5wa_ 677 G-HTVEQV 683 (796)
T ss_dssp S-CCHHHH
T ss_pred c-CchHHH
Confidence 3 344443
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=80.82 E-value=45 Score=36.83 Aligned_cols=141 Identities=11% Similarity=0.071 Sum_probs=93.8
Q ss_pred CCCeEEEEEcCccccCChHHHHHH----HHHHHHhCCCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccCCC
Q psy2719 309 ENLKVILGVDRLDYTKGLVHRIKA----FERLLEKHPEYV-EKVTFLQISVPSRTDVLEYKALKDEMDQLVGRINGRFSK 383 (808)
Q Consensus 309 ~~~~iil~V~Rl~~~KGi~~~l~A----~~~ll~~~p~~~-~~v~lv~ig~~~~~~~~~~~~l~~~l~~lv~~in~~~g~ 383 (808)
++..+++++-|+..-|-....+.- +.++. +.|+.. ..+++|..|...+++... +++-+.|.+++..+|..-..
T Consensus 548 p~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk-~~~~~~~~P~q~IFaGKAhP~d~~g-K~iIk~I~~va~~in~dp~~ 625 (824)
T d2gj4a1 548 PNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIK-KEPNKFVVPRTVMIGGKAAPGYHMA-KMIIKLITAIGDVVNHDPVV 625 (824)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHH-HCTTSCCCCEEEEEECCCCTTCHHH-HHHHHHHHHHHHHHTTCTTT
T ss_pred cchhhhhheeechhhhhhhhhHhhHHHHHHHhh-hcccCCCCCeEEEEeCCCCCccHHH-HHHHHHHHHHHHHHhcChhh
Confidence 567889999999999998874443 34443 444432 357788777666555433 34556666776767643111
Q ss_pred CCCccEEEEcCCCCHHHHHHHHHhcCeEEECCC--CCCCChhHHHHHHhccCCCceEEEcCCCCCcccc----C--ceEE
Q psy2719 384 PNWSPIRYIFGCIGQEELAALYRDSAIALVTPL--RDGMNLVAKEYVACQIREPGVLILSPFAGAGGMM----H--EALL 455 (808)
Q Consensus 384 ~~~~~v~~~~~~v~~~el~aly~~Adv~v~~S~--~EG~gLv~~Eama~~~~~~g~vVlS~~~G~~~~l----~--~~ll 455 (808)
.+...|+|+. ..+-.--..++.+|||.+.+|. .|.=|..-+=||. .|++-+|..-|+--++ + ++++
T Consensus 626 ~~~lkVvFle-nY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~al-----NGal~lstlDGwnvEi~~~vg~~N~~~ 699 (824)
T d2gj4a1 626 GDRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFML-----NGALTIGTMDGANVEMAEEAGEENFFI 699 (824)
T ss_dssp GGGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHH-----TTCEEEECSCTTHHHHHHHHCGGGSEE
T ss_pred ccceeEEEcC-CCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHH-----cCCeeeccccchHHHHHHhcCcccEEE
Confidence 2233577664 4455555678999999999997 5777777777765 3789999999985544 2 4777
Q ss_pred EC
Q psy2719 456 VN 457 (808)
Q Consensus 456 vn 457 (808)
+-
T Consensus 700 fG 701 (824)
T d2gj4a1 700 FG 701 (824)
T ss_dssp CS
T ss_pred eC
Confidence 73
|