Psyllid ID: psy2856

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
Protein Sequence
MRFRYSLIINISQFVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR
Secondary Structure (PSIPRED)
ccEEEEcccccccccccEEEcccccccccccccEEEEccccEEEEcccccEEcccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccccccccccccccEEEEccccEEEEcccccc
Secondary Structure Prediction (SSPRO)
cEEEEEcccccccccccccccHcccccccccccEEEcccccEEEEccccccccccccccccHHccccccccccccccEEEcccccEEEEccccccccccccccEccccccccccccccEEEcccccEEEEcccccc
Coil and Loop (DISEMBL)
MRFRYSLIINISQFVVFVDinecahpnacgvnalcqnypgnytcscqpgytgnpfegcididecqyasthpvcgpgarctnfpggyhcecppgyhgdafttgcvdadecvnrpcgkdalcsnvdgsytctcppgfr
Flexible Loop (DISEMBL)
MRFRYSLIINISQFVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKdalcsnvdgsytctcppgfr
Low Complexity Region (SEG)
MRFRYSLIINISQFVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR
Disordered region (IsUnstruct)
**FRYSLIINISQFVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTC*****
Disordered Region (DISOPRED)
MRFRYSLIINISQFVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR
Disordered Region (DISEMBL)
MRFRYSLIINISQFVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR
Disordered Region (DISPRO)
MRFRYSLIINISQFVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGF*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRFRYSLIINISQFVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	136	2.2.26 [Sep-21-2011]
A2AJ76	5100	Hemicentin-2 OS=Mus muscu	yes	N/A	0.838	0.022	0.383	7e-17
Q75N90	2809	Fibrillin-3 OS=Homo sapie	yes	N/A	0.838	0.040	0.453	9e-17
Q8NDA2	5065	Hemicentin-2 OS=Homo sapi	no	N/A	0.838	0.022	0.378	1e-16
Q61554	2871	Fibrillin-1 OS=Mus muscul	no	N/A	0.845	0.040	0.420	2e-16
P35555	2871	Fibrillin-1 OS=Homo sapie	no	N/A	0.845	0.040	0.411	2e-16
Q2Q421	830	EGF-like module-containin	no	N/A	0.838	0.137	0.388	5e-16
Q14246	886	EGF-like module-containin	no	N/A	0.823	0.126	0.417	8e-16
P98133	2871	Fibrillin-1 OS=Bos taurus	no	N/A	0.845	0.040	0.411	1e-15
Q08761	675	Vitamin K-dependent prote	no	N/A	0.830	0.167	0.422	1e-15
Q14766	1721	Latent-transforming growt	no	N/A	0.838	0.066	0.408	3e-15

>sp|A2AJ76|HMCN2_MOUSE Hemicentin-2 OS=Mus musculus GN=Hmcn2 PE=1 SV=1

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 6/120 (5%)

Query: 19   DINECA-HPNACGVNALCQNYPGNYTC--SCQPGY-TGNPFEGCIDIDECQYASTHPVCG 74
            D++ECA + + C     C N  G+Y C  SC+PG+        C D+DEC        C 
Sbjct: 4709 DVDECAGNTHLCQEEQRCVNLLGSYNCLASCRPGFRVTADGSNCEDVDECLEQLDE--CH 4766

Query: 75   PGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPG 134
                C N PGG+HC CP GY     +  C+D +EC+  P      C N+ GSY C CPPG
Sbjct: 4767 YNQLCENTPGGHHCGCPRGYRQQGHSLPCLDINECLQLPTPCVYQCQNLQGSYRCLCPPG 4826

Mus musculus (taxid: 10090)

>sp|Q75N90|FBN3_HUMAN Fibrillin-3 OS=Homo sapiens GN=FBN3 PE=2 SV=3

 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 65/119 (54%), Gaps = 5/119 (4%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGY-TGNPFEGCIDIDECQYASTHPVCGPGA 77
           DINECA       N +C+N  G+Y C C  GY  G   + C D+DEC   S   +C  G 
Sbjct: 682 DINECALDPEVCANGVCENLRGSYRCVCNLGYEAGASGKDCTDVDECALNSL--LCDNGW 739

Query: 78  RCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
            C N PG Y C CPPG+H    T  C D DEC++ PC    +C N+ GSYTC C PG R
Sbjct: 740 -CQNSPGSYSCSCPPGFHFWQDTEICKDVDECLSSPC-VSGVCRNLAGSYTCKCGPGSR 796

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-containing microfibrils provide long-term force bearing structural support.

Homo sapiens (taxid: 9606)

>sp|Q8NDA2|HMCN2_HUMAN Hemicentin-2 OS=Homo sapiens GN=HMCN2 PE=2 SV=2

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/119 (37%), Positives = 57/119 (47%), Gaps = 5/119 (4%)

Query: 19   DINECA-HPNACGVNALCQNYPGNYTC--SCQPGYTGNPFEGCIDIDECQYASTHPVCGP 75
            D++ECA   + C     C N  G+Y C   C PG+      GC D+DEC        C  
Sbjct: 4675 DVDECAWDAHLCREGQRCVNLLGSYRCLPDCGPGFRVADGAGCEDVDECLEGLDD--CHY 4732

Query: 76   GARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPG 134
               C N PGG+ C CP GY     +  C+D +EC+  P      C N+ GSY C CPPG
Sbjct: 4733 NQLCENTPGGHRCSCPRGYRMQGPSLPCLDVNECLQLPKACAYQCHNLQGSYRCLCPPG 4791

Homo sapiens (taxid: 9606)

>sp|Q61554|FBN1_MOUSE Fibrillin-1 OS=Mus musculus GN=Fbn1 PE=1 SV=1

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 63/119 (52%), Gaps = 4/119 (3%)

Query: 18   VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP-FEGCIDIDECQYASTHPVCGPG 76
            +DI+EC          +C N  G Y C C PG+  +P    CIDI+EC+ ++   +C P 
Sbjct: 1112 MDIDECQRDPLLCRGGICHNTEGTYRCECPPGHQLSPNISACIDINECELSAN--LC-PH 1168

Query: 77   ARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
             RC N  G Y C C PGYH       CVD DEC     G +  C+N DGSY C+C PGF
Sbjct: 1169 GRCVNLIGKYQCACNPGYHPTHDRLFCVDIDECSIMNGGCETFCTNSDGSYECSCQPGF 1227

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Mus musculus (taxid: 10090)

>sp|P35555|FBN1_HUMAN Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 64/119 (53%), Gaps = 4/119 (3%)

Query: 18   VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP-FEGCIDIDECQYASTHPVCGPG 76
            +DI+EC          +C N  G+Y C C PG+  +P    CIDI+EC+ ++   +C P 
Sbjct: 1112 MDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACIDINECELSAH--LC-PN 1168

Query: 77   ARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
             RC N  G Y C C PGYH       CVD DEC     G +  C+N +GSY C+C PGF
Sbjct: 1169 GRCVNLIGKYQCACNPGYHSTPDRLFCVDIDECSIMNGGCETFCTNSEGSYECSCQPGF 1227

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Homo sapiens (taxid: 9606)

>sp|Q2Q421|EMR2_CANFA EGF-like module-containing mucin-like hormone receptor-like 2 OS=Canis familiaris GN=EMR2 PE=2 SV=2

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 52/134 (38%), Positives = 62/134 (46%), Gaps = 20/134 (14%)

Query: 19  DINECAHPN--ACGVNALCQNYPGNYTCSCQPGYT---------GNPFEGCIDIDECQYA 67
           DI+EC  P   +CG  A CQN  G+Y C C PGY                C D+DECQ  
Sbjct: 69  DIDECGPPPLVSCGRLADCQNTEGSYHCMCSPGYALASGATTFMNESENTCRDVDECQLK 128

Query: 68  STHPVCGPGARCTNFPGGYHCECPPGYH---GDAFTTGCVDADECVN--RPCGKDALCSN 122
               VC     CTN  G Y C+CPPG+    GD     C D +EC +   PC     C N
Sbjct: 129 PR--VCKSRGICTNTKGSYTCKCPPGFELNLGD--LNLCTDVNECTSGQNPCHNSTHCLN 184

Query: 123 VDGSYTCTCPPGFR 136
             G Y C C PG++
Sbjct: 185 NIGGYECRCRPGWK 198

Cell surface receptor that binds to the chondroitin sulfate moiety of glycosaminoglycan chains and promotes cell attachment. Promotes granulocyte chemotaxis, degranulation and adhesion. In macrophages, promotes the release of inflammatory cytokines, including IL8 and TNF.

Canis familiaris (taxid: 9615)

>sp|Q14246|EMR1_HUMAN EGF-like module-containing mucin-like hormone receptor-like 1 OS=Homo sapiens GN=EMR1 PE=2 SV=3

 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 72/134 (53%), Gaps = 22/134 (16%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGN----PFEG----CIDIDECQYASTH 70
           D++ECA P AC  +A C N  GNY+C C PG+  +     F+G    C DIDEC      
Sbjct: 172 DVDECADPRACPEHATCNNTVGNYSCFCNPGFESSSGHLSFQGLKASCEDIDECT----- 226

Query: 71  PVCGPGARCTNFPGGYHCECPPGY---HGDA-FT---TGCVDADECVNRP--CGKDALCS 121
            +C   + CTN PG Y C C PG+   +G   FT     C D DEC   P  CG +++C+
Sbjct: 227 EMCPINSTCTNTPGSYFCTCHPGFAPSNGQLNFTDQGVECRDIDECRQDPSTCGPNSICT 286

Query: 122 NVDGSYTCTCPPGF 135
           N  GSY+C C  GF
Sbjct: 287 NALGSYSCGCIAGF 300

Could be involved in cell-cell interactions.

Homo sapiens (taxid: 9606)

>sp|P98133|FBN1_BOVIN Fibrillin-1 OS=Bos taurus GN=FBN1 PE=1 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 63/119 (52%), Gaps = 4/119 (3%)

Query: 18   VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP-FEGCIDIDECQYASTHPVCGPG 76
            +DI+EC          +C N  G+Y C C PG+   P    CIDI+EC+ ++   +C P 
Sbjct: 1112 MDIDECQRDPLLCRGGVCLNTEGSYRCECPPGHQLAPNISACIDINECELSAH--LC-PH 1168

Query: 77   ARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
             RC N  G Y C C PGYH       CVD DEC     G +  C+N +GSY C+C PGF
Sbjct: 1169 GRCVNLIGKYQCACNPGYHSTPDRLFCVDIDECSIMNGGCETFCTNSEGSYECSCQPGF 1227

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Bos taurus (taxid: 9913)

>sp|Q08761|PROS_MOUSE Vitamin K-dependent protein S OS=Mus musculus GN=Pros1 PE=2 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 66/123 (53%), Gaps = 10/123 (8%)

Query: 19  DINECAHPNAC--GVNALCQNYPGNYTCSCQPGYTGNP-FEGCIDIDECQYASTHPVCGP 75
           D+NEC  P+    G + +C N PG+Y CSC+ G+   P  + C D+DEC  A    VCG 
Sbjct: 157 DVNECKDPSNVNGGCSQICDNTPGSYHCSCKRGFAMLPNKKDCKDLDEC--ALKPSVCGT 214

Query: 76  GARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTC--PP 133
            A C N PG + CECP GY  D  +  C D DEC    C +  LC N  G Y+C C    
Sbjct: 215 -AVCKNIPGDFECECPDGYRYDPSSKSCKDVDECSENMCAQ--LCVNFPGGYSCYCDGKK 271

Query: 134 GFR 136
           GF+
Sbjct: 272 GFK 274

Anticoagulant plasma protein; it is a cofactor to activated protein C in the degradation of coagulation factors Va and VIIIa. It helps to prevent coagulation and stimulating fibrinolysis.

Mus musculus (taxid: 10090)

>sp|Q14766|LTBP1_HUMAN Latent-transforming growth factor beta-binding protein 1 OS=Homo sapiens GN=LTBP1 PE=1 SV=4

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 62/120 (51%), Gaps = 6/120 (5%)

Query: 18   VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP-FEGCIDIDECQYASTHPVCGPG 76
            +D++EC  PN C  N  C N  G+Y CSC  GYT  P  + C DIDECQ  +   +C  G
Sbjct: 1037 LDVDECLEPNVC-ANGDCSNLEGSYMCSCHKGYTRTPDHKHCRDIDECQQGN---LCVNG 1092

Query: 77   ARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
             +C N  G + C C  GY   A    C D DEC +R       C N +GS+ C C  G+R
Sbjct: 1093 -QCKNTEGSFRCTCGQGYQLSAAKDQCEDIDECQHRHLCAHGQCRNTEGSFQCVCDQGYR 1151

May be involved in the assembly, secretion and targeting of TGFB1 to sites at which it is stored and/or activated. May play critical roles in controlling and directing the activity of TGFB1. May have a structural role in the extra cellular matrix (ECM).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
328714521	16577	PREDICTED: hypothetical protein LOC10016	0.867	0.007	0.611	3e-35
270013391	21117	hypothetical protein TcasGA2_TC011986 [T	0.867	0.005	0.606	2e-34
157133851	3461	hypothetical protein AaeL_AAEL012909 [Ae	0.852	0.033	0.6	1e-30
195052558	7303	GH13743 [Drosophila grimshawi] gi|193900	0.867	0.016	0.573	2e-30
195117710	7357	GI17886 [Drosophila mojavensis] gi|19391	0.867	0.016	0.573	5e-30
386769086	15638	dumpy, isoform I [Drosophila melanogaste	0.867	0.007	0.580	6e-30
442625922	14825	dumpy, isoform X [Drosophila melanogaste	0.867	0.007	0.580	6e-30
386769088	15105	dumpy, isoform J [Drosophila melanogaste	0.867	0.007	0.580	6e-30
357612664	18906	hypothetical protein KGM_01730 [Danaus p	0.838	0.006	0.559	8e-30
195386886	3915	GJ17387 [Drosophila virilis] gi|19414859	0.867	0.030	0.565	8e-30

>gi|328714521|ref|XP_003245382.1| PREDICTED: hypothetical protein LOC100166039 [Acyrthosiphon pisum]

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 74/121 (61%), Positives = 91/121 (75%), Gaps = 3/121 (2%)

Query: 15  VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCG 74
           V   DI+EC  P+ACG NA+C+N PGNYTC CQ G+ GNP++GC+D++EC   +   VCG
Sbjct: 203 VECKDIDECLRPDACGNNAICRNTPGNYTCDCQQGFVGNPYDGCVDVNECSLPN---VCG 259

Query: 75  PGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPG 134
           PG+ CTNFPGG+HCECP GY GDA+  GC D DEC   PCGKDA C N +GS+ C+CPPG
Sbjct: 260 PGSLCTNFPGGHHCECPEGYTGDAYGAGCHDVDECSRSPCGKDAQCHNNEGSFRCSCPPG 319

Query: 135 F 135
           F
Sbjct: 320 F 320

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270013391|gb|EFA09839.1| hypothetical protein TcasGA2_TC011986 [Tribolium castaneum]

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 92/122 (75%), Gaps = 4/122 (3%)

Query: 15  VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCG 74
           V  +DI+EC+HP+ACG NA+C N PGNYTCSC  G+ GNPF+GC+D +EC+  +    CG
Sbjct: 253 VQCLDIDECSHPDACGQNAICHNTPGNYTCSCPEGFIGNPFDGCVDQNECENPN---ACG 309

Query: 75  PGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECV-NRPCGKDALCSNVDGSYTCTCPP 133
           PGA CTN  GG  C CPPG+ GD +TTGC D DEC  + PCG+DA+CSN++GSY C CPP
Sbjct: 310 PGAICTNVEGGRQCHCPPGFEGDPYTTGCGDMDECSRSNPCGRDAICSNLEGSYRCACPP 369

Query: 134 GF 135
           GF
Sbjct: 370 GF 371

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157133851|ref|XP_001663040.1| hypothetical protein AaeL_AAEL012909 [Aedes aegypti] gi|108870664|gb|EAT34889.1| AAEL012909-PA [Aedes aegypti]

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/120 (60%), Positives = 84/120 (70%), Gaps = 4/120 (3%)

Query: 18  VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA 77
            DINEC  P ACGVNA C NYPGNYTC C+ G+ G+P+ GC DIDEC       VCGPGA
Sbjct: 95  TDINECIDPQACGVNAECVNYPGNYTCLCKDGFYGDPYNGCADIDECAQPG---VCGPGA 151

Query: 78  RCTNFPGGYHCECPPGYHGDAFTT-GCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
            CTN+ GGY C+CP G+ GDA +  GCVD DEC   PCG++ALC N  GS+ C CP GF+
Sbjct: 152 ICTNYEGGYRCDCPSGFDGDARSAQGCVDFDECTRSPCGRNALCRNDVGSFRCQCPDGFQ 211

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195052558|ref|XP_001993322.1| GH13743 [Drosophila grimshawi] gi|193900381|gb|EDV99247.1| GH13743 [Drosophila grimshawi]

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 85/122 (69%), Gaps = 4/122 (3%)

Query: 15  VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCG 74
           V+  DI+EC++P ACG NA C N PGN+TC C  G+ GNP++GC D+DEC Y +   VCG
Sbjct: 235 VLCTDIDECSNPQACGANAQCLNTPGNHTCVCPDGFVGNPYDGCQDVDECAYPN---VCG 291

Query: 75  PGARCTNFPGGYHCECPPGYHGDAFT-TGCVDADECVNRPCGKDALCSNVDGSYTCTCPP 133
           PGA CTN  G + C+CPPGY GD  T  GCVD DEC   PCG++A C N DGS+ C CP 
Sbjct: 292 PGAICTNLEGSHRCDCPPGYDGDGRTEQGCVDLDECGRSPCGRNADCLNTDGSFRCLCPD 351

Query: 134 GF 135
           GF
Sbjct: 352 GF 353

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195117710|ref|XP_002003390.1| GI17886 [Drosophila mojavensis] gi|193913965|gb|EDW12832.1| GI17886 [Drosophila mojavensis]

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 84/122 (68%), Gaps = 4/122 (3%)

Query: 15  VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCG 74
           V+  DI+EC++P ACG +A C N PGN+TC C  GY GNP++GC D+DEC Y +   VCG
Sbjct: 207 VLCTDIDECSNPLACGAHAQCINTPGNHTCVCPEGYVGNPYDGCQDLDECTYPN---VCG 263

Query: 75  PGARCTNFPGGYHCECPPGYHGDAFTT-GCVDADECVNRPCGKDALCSNVDGSYTCTCPP 133
           PGA CTN  G Y C+CPPGY GD     GCVD DEC   PCG++A C N DGS+ C CP 
Sbjct: 264 PGAICTNLEGSYRCDCPPGYDGDGRAAQGCVDLDECARTPCGRNADCLNTDGSFRCLCPD 323

Query: 134 GF 135
           GF
Sbjct: 324 GF 325

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|386769086|ref|NP_001245875.1| dumpy, isoform I [Drosophila melanogaster] gi|383291323|gb|AFH03551.1| dumpy, isoform I [Drosophila melanogaster]

 Score =  135 bits (340), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/124 (58%), Positives = 86/124 (69%), Gaps = 6/124 (4%)

Query: 15  VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTG-NPF-EGCIDIDECQYASTHPV 72
           V+  D++EC +P  CG NALC N PGNYTCSC  GY G NP+ EGC D+DEC Y +   V
Sbjct: 208 VLCTDVDECRNPENCGPNALCTNTPGNYTCSCPDGYVGNNPYREGCQDVDECSYPN---V 264

Query: 73  CGPGARCTNFPGGYHCECPPGYHGDAFT-TGCVDADECVNRPCGKDALCSNVDGSYTCTC 131
           CGPGA CTN  G Y C+CPPGY GD  + +GCVD DEC   PCG++A C N DGS+ C C
Sbjct: 265 CGPGAICTNLEGSYRCDCPPGYDGDGRSESGCVDQDECARTPCGRNADCLNTDGSFRCLC 324

Query: 132 PPGF 135
           P G+
Sbjct: 325 PDGY 328

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442625922|ref|NP_001260039.1| dumpy, isoform X [Drosophila melanogaster] gi|440213324|gb|AGB92575.1| dumpy, isoform X [Drosophila melanogaster]

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/124 (58%), Positives = 86/124 (69%), Gaps = 6/124 (4%)

Query: 15  VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTG-NPF-EGCIDIDECQYASTHPV 72
           V+  D++EC +P  CG NALC N PGNYTCSC  GY G NP+ EGC D+DEC Y +   V
Sbjct: 208 VLCTDVDECRNPENCGPNALCTNTPGNYTCSCPDGYVGNNPYREGCQDVDECSYPN---V 264

Query: 73  CGPGARCTNFPGGYHCECPPGYHGDAFT-TGCVDADECVNRPCGKDALCSNVDGSYTCTC 131
           CGPGA CTN  G Y C+CPPGY GD  + +GCVD DEC   PCG++A C N DGS+ C C
Sbjct: 265 CGPGAICTNLEGSYRCDCPPGYDGDGRSESGCVDQDECARTPCGRNADCLNTDGSFRCLC 324

Query: 132 PPGF 135
           P G+
Sbjct: 325 PDGY 328

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|386769088|ref|NP_001245876.1| dumpy, isoform J [Drosophila melanogaster] gi|383291324|gb|AFH03552.1| dumpy, isoform J [Drosophila melanogaster]

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/124 (58%), Positives = 86/124 (69%), Gaps = 6/124 (4%)

Query: 15  VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTG-NPF-EGCIDIDECQYASTHPV 72
           V+  D++EC +P  CG NALC N PGNYTCSC  GY G NP+ EGC D+DEC Y +   V
Sbjct: 208 VLCTDVDECRNPENCGPNALCTNTPGNYTCSCPDGYVGNNPYREGCQDVDECSYPN---V 264

Query: 73  CGPGARCTNFPGGYHCECPPGYHGDAFT-TGCVDADECVNRPCGKDALCSNVDGSYTCTC 131
           CGPGA CTN  G Y C+CPPGY GD  + +GCVD DEC   PCG++A C N DGS+ C C
Sbjct: 265 CGPGAICTNLEGSYRCDCPPGYDGDGRSESGCVDQDECARTPCGRNADCLNTDGSFRCLC 324

Query: 132 PPGF 135
           P G+
Sbjct: 325 PDGY 328

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357612664|gb|EHJ68109.1| hypothetical protein KGM_01730 [Danaus plexippus]

 Score =  135 bits (339), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 66/118 (55%), Positives = 82/118 (69%), Gaps = 4/118 (3%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGAR 78
           DI+EC  P ACGVNA+CQNYPGNYTC+C+ GYTGNPF+GC+D+DEC +      CG GA 
Sbjct: 216 DIDECKRPGACGVNAICQNYPGNYTCACKAGYTGNPFDGCVDVDECSHDK---ACGKGAE 272

Query: 79  CTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
           C N  GGY C CP G  GD     C+D + C +  CG+DALC N+ G++ C CPPG+ 
Sbjct: 273 CRNLEGGYECSCPHGLEGDP-RVDCLDNNLCRSVSCGRDALCENLPGAHRCVCPPGYE 329

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195386886|ref|XP_002052135.1| GJ17387 [Drosophila virilis] gi|194148592|gb|EDW64290.1| GJ17387 [Drosophila virilis]

 Score =  134 bits (338), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 69/122 (56%), Positives = 84/122 (68%), Gaps = 4/122 (3%)

Query: 15  VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCG 74
           V+  DI+EC++P ACG +A C N PGN+TC+C  G+ GNP++GC D+DEC Y +   VCG
Sbjct: 241 VLCTDIDECSNPLACGAHAQCINTPGNHTCACPEGFVGNPYDGCQDVDECAYPN---VCG 297

Query: 75  PGARCTNFPGGYHCECPPGYHGDAFT-TGCVDADECVNRPCGKDALCSNVDGSYTCTCPP 133
           PGA CTN  G Y C CPPGY GD     GCVD DEC   PCG++A C N DGS+ C CP 
Sbjct: 298 PGAICTNLEGSYRCNCPPGYDGDGRAEQGCVDLDECARTPCGRNADCLNTDGSFRCLCPD 357

Query: 134 GF 135
           GF
Sbjct: 358 GF 359

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
FB|FBgn0053196	22	dp "dumpy" [Drosophila melanog	0.867	5.363	0.580	7.4e-37
UNIPROTKB|G3MXC3	1280	G3MXC3 "Uncharacterized protei	0.889	0.094	0.436	8.4e-25
UNIPROTKB|I3LE44	374	I3LE44 "Uncharacterized protei	0.860	0.312	0.425	2.6e-24
UNIPROTKB|D6REJ2	356	FBN2 "Fibrillin-2" [Homo sapie	0.808	0.308	0.454	2.3e-23
ZFIN|ZDB-GENE-081107-41	1315	si:ch73-105b23.1 "si:ch73-105b	0.867	0.089	0.447	2.7e-23
UNIPROTKB|Q75N90	2809	FBN3 "Fibrillin-3" [Homo sapie	0.830	0.040	0.466	5.5e-23
UNIPROTKB|D6RJI3	1473	FBN2 "Fibrillin-2" [Homo sapie	0.808	0.074	0.454	8.2e-23
ZFIN|ZDB-GENE-041014-243	213	si:dkey-235d18.5 "si:dkey-235d	0.852	0.544	0.419	1e-22
WB|WBGene00007170	1183	B0393.5 [Caenorhabditis elegan	0.838	0.096	0.421	1.3e-22
UNIPROTKB|F1PLV6	708	FBLN1 "Uncharacterized protein	0.838	0.161	0.453	1.4e-22

FB|FBgn0053196 dp "dumpy" [Drosophila melanogaster (taxid:7227)]

 Score = 423 (154.0 bits), Expect = 7.4e-37, P = 7.4e-37
 Identities = 72/124 (58%), Positives = 86/124 (69%)

Query:    15 VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGN-PF-EGCIDIDECQYASTHPV 72
             V+  D++EC +P  CG NALC N PGNYTCSC  GY GN P+ EGC D+DEC Y +   V
Sbjct:   208 VLCTDVDECRNPENCGPNALCTNTPGNYTCSCPDGYVGNNPYREGCQDVDECSYPN---V 264

Query:    73 CGPGARCTNFPGGYHCECPPGYHGDAFT-TGCVDADECVNRPCGKDALCSNVDGSYTCTC 131
             CGPGA CTN  G Y C+CPPGY GD  + +GCVD DEC   PCG++A C N DGS+ C C
Sbjct:   265 CGPGAICTNLEGSYRCDCPPGYDGDGRSESGCVDQDECARTPCGRNADCLNTDGSFRCLC 324

Query:   132 PPGF 135
             P G+
Sbjct:   325 PDGY 328

GO:0007475 "apposition of dorsal and ventral imaginal disc-derived wing surfaces" evidence=IMP

GO:0005578 "proteinaceous extracellular matrix" evidence=NAS

GO:0007424 "open tracheal system development" evidence=IMP

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

GO:0004519 "endonuclease activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008362 "chitin-based embryonic cuticle biosynthetic process" evidence=IMP

GO:0040005 "chitin-based cuticle attachment to epithelium" evidence=IMP

GO:0031012 "extracellular matrix" evidence=ISM

GO:0005201 "extracellular matrix structural constituent" evidence=ISM

GO:0046331 "lateral inhibition" evidence=IMP

UNIPROTKB|G3MXC3 G3MXC3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 296 (109.3 bits), Expect = 8.4e-25, P = 8.4e-25
 Identities = 58/133 (43%), Positives = 78/133 (58%)

Query:     9 INISQFVVFVDINECA-HPNACGVNALCQNYPGNYTCSCQPGYTGNPFEG--CIDIDECQ 65
             +N+ Q V+FV+ +EC  +P  CG    C   P  YTC+C  G+  +P +G  CID+DEC+
Sbjct:   544 VNVRQ-VIFVEDSECQRNPQVCG-RGRCIPRPSGYTCACDSGFRLSP-QGTHCIDVDECR 600

Query:    66 YASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRP--CGKDALCSNV 123
                T P C PG RC N PG + C C PG+      T C+D DEC+  P  CG+  +C N+
Sbjct:   601 RVPT-P-CAPG-RCENTPGSFRCVCGPGFRAGPRGTECLDVDECIQSPGLCGR-GVCENL 656

Query:   124 DGSYTCTCPPGFR 136
              GS+ C CP GFR
Sbjct:   657 PGSFRCVCPAGFR 669

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|I3LE44 I3LE44 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 54/127 (42%), Positives = 75/127 (59%)

Query:    16 VFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGP 75
             +  D+NECA+P  C  +A+C+N  G+Y+C C+PG+  +    C+D DEC   ST P CG 
Sbjct:    97 ICTDVNECANPKTCPEHAICRNSVGSYSCVCKPGFESSRVF-CLDGDECSRNST-P-CGA 153

Query:    76 GARCTNFPGGYHCECPPGY--H-GDAF--TTGCVDADECVNRP--CGKDALCSNVDGSYT 128
              + CTN  G Y+C C PG+  H G ++       D DEC   P  CG  ++C N+ GSY 
Sbjct:   154 SSACTNLLGKYNCSCLPGFSPHNGPSYFGDFSSPDIDECSQSPPACGPHSVCRNLPGSYK 213

Query:   129 CTCPPGF 135
             C+C PGF
Sbjct:   214 CSCLPGF 220

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|D6REJ2 FBN2 "Fibrillin-2" [Homo sapiens (taxid:9606)]

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 55/121 (45%), Positives = 70/121 (57%)

Query:    19 DINEC---AHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGP 75
             D++EC   AH N C ++A C N PG++ CSC+ G+ GN  + CID+DEC    TH  C  
Sbjct:   217 DVDECEIGAH-N-CDMHASCLNIPGSFKCSCREGWIGNGIK-CIDLDECSNG-THQ-CSI 271

Query:    76 GARCTNFPGGYHCECPPGYHGDAFTTGCVDADECV-NRPCGKDALCSNVDGSYTCTCPPG 134
              A+C N PG Y C C  G+ GD FT  C D DEC  N    ++  C NV G+Y C C  G
Sbjct:   272 NAQCVNTPGSYRCACSEGFTGDGFT--CSDVDECAENINLCENGQCLNVPGAYRCECEMG 329

Query:   135 F 135
             F
Sbjct:   330 F 330

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

ZFIN|ZDB-GENE-081107-41 si:ch73-105b23.1 "si:ch73-105b23.1" [Danio rerio (taxid:7955)]

 Score = 282 (104.3 bits), Expect = 2.7e-23, P = 2.7e-23
 Identities = 55/123 (44%), Positives = 68/123 (55%)

Query:    15 VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCG 74
             +V  D++EC     C VNALC N PG Y CSC  GYTGN    C DI+EC   +    C 
Sbjct:   308 LVCEDVDECVTEKRCHVNALCINSPGKYNCSCMVGYTGNGVSQCTDINECLVDNGG--CK 365

Query:    75 PGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECV--NRPCGKDALCSNVDGSYTCTCP 132
               A C+N  G Y C CP G+     TT C D DEC    + CG +  C+N++GSY+C C 
Sbjct:   366 NRATCSNSKGSYSCICPSGFRLVNHTT-CQDIDECQLPEKVCGTNEQCTNLEGSYSCQCK 424

Query:   133 PGF 135
              GF
Sbjct:   425 AGF 427

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|Q75N90 FBN3 "Fibrillin-3" [Homo sapiens (taxid:9606)]

 Score = 283 (104.7 bits), Expect = 5.5e-23, P = 5.5e-23
 Identities = 56/120 (46%), Positives = 67/120 (55%)

Query:    19 DINECA-HPNACGVNALCQNYPGNYTCSCQPGY-TGNPFEGCIDIDECQYASTHPVCGPG 76
             DINECA  P  C  N +C+N  G+Y C C  GY  G   + C D+DEC   S   +C  G
Sbjct:   682 DINECALDPEVCA-NGVCENLRGSYRCVCNLGYEAGASGKDCTDVDECALNSL--LCDNG 738

Query:    77 ARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
               C N PG Y C CPPG+H    T  C D DEC++ PC    +C N+ GSYTC C PG R
Sbjct:   739 W-CQNSPGSYSCSCPPGFHFWQDTEICKDVDECLSSPC-VSGVCRNLAGSYTCKCGPGSR 796

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

UNIPROTKB|D6RJI3 FBN2 "Fibrillin-2" [Homo sapiens (taxid:9606)]

 Score = 269 (99.8 bits), Expect = 8.2e-23, Sum P(2) = 8.2e-23
 Identities = 55/121 (45%), Positives = 70/121 (57%)

Query:    19 DINEC---AHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGP 75
             D++EC   AH N C ++A C N PG++ CSC+ G+ GN  + CID+DEC    TH  C  
Sbjct:  1334 DVDECEIGAH-N-CDMHASCLNIPGSFKCSCREGWIGNGIK-CIDLDECSNG-THQ-CSI 1388

Query:    76 GARCTNFPGGYHCECPPGYHGDAFTTGCVDADECV-NRPCGKDALCSNVDGSYTCTCPPG 134
              A+C N PG Y C C  G+ GD FT  C D DEC  N    ++  C NV G+Y C C  G
Sbjct:  1389 NAQCVNTPGSYRCACSEGFTGDGFT--CSDVDECAENINLCENGQCLNVPGAYRCECEMG 1446

Query:   135 F 135
             F
Sbjct:  1447 F 1447

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

ZFIN|ZDB-GENE-041014-243 si:dkey-235d18.5 "si:dkey-235d18.5" [Danio rerio (taxid:7955)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 52/124 (41%), Positives = 66/124 (53%)

Query:    20 INEC--AHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPV--CGP 75
             I+EC    P  CG +A C N PG++ C C  G+  +  +GC D+DEC  AS   +  CG 
Sbjct:     2 IDECRLGDPGPCGFHANCTNTPGSFVCRCHRGFLMST-DGCTDVDECVLASVTGLQACGS 60

Query:    76 GARCTNFPGGYHCECPPGYHGDAFTTGCVDADEC-VNRPCGKDA--LCSNVDGSYTCTCP 132
             GA C N PG + C CP G+        CVD DEC     C ++   +C N  GSYTC C 
Sbjct:    61 GAECKNTPGSFSCSCPEGFVLALDGQNCVDIDECNFEERCRRELGNVCVNTAGSYTCVCL 120

Query:   133 PGFR 136
              GFR
Sbjct:   121 DGFR 124

GO:0005509 "calcium ion binding" evidence=IEA

WB|WBGene00007170 B0393.5 [Caenorhabditis elegans (taxid:6239)]

 Score = 275 (101.9 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 51/121 (42%), Positives = 63/121 (52%)

Query:    19 DINECAH-PNACG---VNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCG 74
             D++EC   P  CG       C N  G + C C+ GY G+P   C D++EC+       CG
Sbjct:   520 DVDECRELPKICGDPNKGTKCINKDGTFECLCKDGYEGDPSSECRDVNECKNPDA---CG 576

Query:    75 PGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPG 134
             P ++CTN  GGY CEC  G+   A    C D DEC   PC   A+CSN  GSY C C  G
Sbjct:   577 PNSQCTNTQGGYECECLAGFERIAEGAHCTDRDECAVEPCHPAAICSNTRGSYKCECRDG 636

Query:   135 F 135
             F
Sbjct:   637 F 637

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1PLV6 FBLN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 271 (100.5 bits), Expect = 1.4e-22, P = 1.4e-22
 Identities = 59/130 (45%), Positives = 71/130 (54%)

Query:    18 VDINECAHPNA-CGVNALCQNYPGNYTC-----SCQPGYTGNPFEG--CIDIDECQYAST 69
             +DINEC   +A C V   C N  G+YTC     +C  GY  N  EG  C+D+DEC  A +
Sbjct:   312 IDINECLSISAPCPVGQTCINTEGSYTCQKNVPNCGRGYHLNE-EGTRCVDVDECA-APS 369

Query:    70 HPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRP---CGKDALCSNVDGS 126
              P CGPG  C N PG + CEC  GY+ D  +  CVD +EC   P   CG    C N  GS
Sbjct:   370 EP-CGPGHLCVNSPGSFRCECKAGYYFDGISRTCVDINECRRYPGRLCGHK--CENTPGS 426

Query:   127 YTCTCPPGFR 136
             Y C+C  GFR
Sbjct:   427 YFCSCTVGFR 436

GO:0005576 "extracellular region" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	136
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	2e-07
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	4e-07
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	6e-07
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	1e-06
cd00053	36	cd00053, EGF, Epidermal growth factor domain, foun	2e-04
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	7e-04
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	0.001
cd00053	36	cd00053, EGF, Epidermal growth factor domain, foun	0.001
pfam12947	36	pfam12947, EGF_3, EGF domain	0.001
pfam12947	36	pfam12947, EGF_3, EGF domain	0.002
pfam12947	36	pfam12947, EGF_3, EGF domain	0.003

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 44.2 bits (105), Expect = 2e-07
 Identities = 19/34 (55%), Positives = 21/34 (61%)

Query: 19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTG 52
          DI+ECA  N C     C N  G+Y CSC PGYTG
Sbjct: 1  DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYTG 34

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 43.4 bits (103), Expect = 4e-07
 Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 3/36 (8%)

Query: 60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYH 95
          DIDEC   ++   C  G  C N  G Y CECPPGY 
Sbjct: 1  DIDEC---ASGNPCQNGGTCVNTVGSYRCECPPGYT 33

Length = 39

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 43.0 bits (102), Expect = 6e-07
 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 3/38 (7%)

Query: 60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD 97
          DIDEC   ++   C  G  C N  G Y C CPPGY G 
Sbjct: 1  DIDEC---ASGNPCQNGGTCVNTVGSYRCSCPPGYTGR 35

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 42.2 bits (100), Expect = 1e-06
 Identities = 17/33 (51%), Positives = 19/33 (57%)

Query: 19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYT 51
          DI+ECA  N C     C N  G+Y C C PGYT
Sbjct: 1  DIDECASGNPCQNGGTCVNTVGSYRCECPPGYT 33

Length = 39

>gnl|CDD|238010 cd00053, EGF, Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

 Score = 36.3 bits (84), Expect = 2e-04
 Identities = 17/32 (53%), Positives = 19/32 (59%)

Query: 22 ECAHPNACGVNALCQNYPGNYTCSCQPGYTGN 53
          ECA  N C     C N PG+Y C C PGYTG+
Sbjct: 1  ECAASNPCSNGGTCVNTPGSYRCVCPPGYTGD 32

Length = 36

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 34.9 bits (81), Expect = 7e-04
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 105 DADECVNR-PCGKDALCSNVDGSYTCTCPPGFR 136
           D DEC +  PC     C N  GSY C+CPPG+ 
Sbjct: 1   DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYT 33

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 34.5 bits (80), Expect = 0.001
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 105 DADECVNR-PCGKDALCSNVDGSYTCTCPPGFR 136
           D DEC +  PC     C N  GSY C CPPG+ 
Sbjct: 1   DIDECASGNPCQNGGTCVNTVGSYRCECPPGYT 33

Length = 39

>gnl|CDD|238010 cd00053, EGF, Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

 Score = 34.4 bits (79), Expect = 0.001
 Identities = 15/30 (50%), Positives = 16/30 (53%)

Query: 68 STHPVCGPGARCTNFPGGYHCECPPGYHGD 97
          +    C  G  C N PG Y C CPPGY GD
Sbjct: 3  AASNPCSNGGTCVNTPGSYRCVCPPGYTGD 32

Length = 36

>gnl|CDD|205157 pfam12947, EGF_3, EGF domain

 Score = 34.4 bits (80), Expect = 0.001
 Identities = 13/25 (52%), Positives = 18/25 (72%)

Query: 29 CGVNALCQNYPGNYTCSCQPGYTGN 53
          C  NA C N  G++TC+C+ GYTG+
Sbjct: 8  CHPNATCTNTGGSFTCTCKSGYTGD 32

This family includes a variety of EGF-like domain homologues. This family includes the C-terminal domain of the malaria parasite MSP1 protein. Length = 36

>gnl|CDD|205157 pfam12947, EGF_3, EGF domain

 Score = 33.7 bits (78), Expect = 0.002
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 111 NRPCGKDALCSNVDGSYTCTCPPGF 135
           N  C  +A C+N  GS+TCTC  G+
Sbjct: 5   NGGCHPNATCTNTGGSFTCTCKSGY 29

This family includes a variety of EGF-like domain homologues. This family includes the C-terminal domain of the malaria parasite MSP1 protein. Length = 36

>gnl|CDD|205157 pfam12947, EGF_3, EGF domain

 Score = 32.9 bits (76), Expect = 0.003
 Identities = 14/28 (50%), Positives = 15/28 (53%)

Query: 73  CGPGARCTNFPGGYHCECPPGYHGDAFT 100
           C P A CTN  G + C C  GY GD  T
Sbjct: 8   CHPNATCTNTGGSFTCTCKSGYTGDGVT 35

This family includes a variety of EGF-like domain homologues. This family includes the C-terminal domain of the malaria parasite MSP1 protein. Length = 36

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	136
KOG1219|consensus	4289		99.6
KOG1214|consensus	1289		99.48
KOG4289|consensus	2531		99.18
KOG4289|consensus	2531		98.73
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.7
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.66
KOG1214|consensus	1289		98.58
KOG1219|consensus	4289		98.57
KOG1217|consensus	487		98.36
KOG1217|consensus	487		98.34
KOG4260|consensus	350		98.32
KOG4260|consensus	350		98.2
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	98.19
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.99
PF12662	24	cEGF: Complement Clr-like EGF-like	97.97
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.91
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.85
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	97.76
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	97.74
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.68
PF12662	24	cEGF: Complement Clr-like EGF-like	97.65
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.59
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.5
cd00053	36	EGF Epidermal growth factor domain, found in epide	97.27
cd00053	36	EGF Epidermal growth factor domain, found in epide	97.19
smart00181	35	EGF Epidermal growth factor-like domain.	97.11
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.07
smart00181	35	EGF Epidermal growth factor-like domain.	96.98
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	96.59
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	96.55
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	96.52
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	96.27
KOG1225|consensus	525		95.8
KOG1225|consensus	525		95.03
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	94.27
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	93.23
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	92.39
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	91.01
KOG1226|consensus	783		83.56
KOG3516|consensus	1306		80.29

>KOG1219|consensus

Probab=99.60  E-value=4.3e-15  Score=110.26  Aligned_cols=107  Identities=36%  Similarity=0.957  Sum_probs=93.9

Q ss_pred             CCCCCCCCCCCCCeeeeCC-CCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCC
Q psy2856          21 NECAHPNACGVNALCQNYP-GNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAF   99 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~~~-g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~   99 (136)
                      ++|.+ ++|++++.|...+ |+|.|.|++.|.|..++  .+...|...+    |..+..|+...+.+.|.|+.||.|.-+
T Consensus      3865 d~C~~-npCqhgG~C~~~~~ggy~CkCpsqysG~~CE--i~~epC~snP----C~~GgtCip~~n~f~CnC~~gyTG~~C 3937 (4289)
T KOG1219|consen 3865 DPCND-NPCQHGGTCISQPKGGYKCKCPSQYSGNHCE--IDLEPCASNP----CLTGGTCIPFYNGFLCNCPNGYTGKRC 3937 (4289)
T ss_pred             ccccc-CcccCCCEecCCCCCceEEeCcccccCcccc--cccccccCCC----CCCCCEEEecCCCeeEeCCCCccCcee
Confidence            77875 8999999999887 78999999999998776  5778888766    999999999999999999999998766


Q ss_pred             CcceeeCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         100 TTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       100 ~~~~~~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ..  ..++||+.+.|..++.|+|..|+|.|.|-+||+
T Consensus      3938 e~--~Gi~eCs~n~C~~gg~C~n~~gsf~CncT~g~~ 3972 (4289)
T KOG1219|consen 3938 EA--RGISECSKNVCGTGGQCINIPGSFHCNCTPGIL 3972 (4289)
T ss_pred             ec--ccccccccccccCCceeeccCCceEeccChhHh
Confidence            43  138899999999999999999999999998863

>KOG1214|consensus

Probab=99.48  E-value=4.1e-13  Score=92.85  Aligned_cols=120  Identities=37%  Similarity=0.850  Sum_probs=92.3

Q ss_pred             ceeeeeeCCCCCC-CCCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCccc------CCcccCCCCCCCCCCCCee--eec
Q psy2856          13 QFVVFVDINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCID------IDECQYASTHPVCGPGARC--TNF   82 (136)
Q Consensus        13 ~~~~c~~~~~c~~-~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~------~~~c~~~~~~~~c~~~~~c--~~~   82 (136)
                      ...+|.|.++|+. ...|++.++|+|.++.|.|.|..||..... .+|..      .+.|....+  .|....++  +..
T Consensus       727 dgr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h--~C~i~g~a~c~~h  804 (1289)
T KOG1214|consen  727 DGRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSH--TCAIAGQARCVHH  804 (1289)
T ss_pred             CCCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCCCCCCccccCcc--ccCcCCceEEEec
Confidence            5688999999985 346999999999999999999998865443 33443      344554321  24444444  443


Q ss_pred             C-CCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856          83 P-GGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        83 ~-~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      . +.|.|.|.+||.+...  .|.++|||.+..|+..+.|.++++++.|+|.+||.
T Consensus       805 Ggs~y~C~CLPGfsGDG~--~c~dvDeC~psrChp~A~CyntpgsfsC~C~pGy~  857 (1289)
T KOG1214|consen  805 GGSTYSCACLPGFSGDGH--QCTDVDECSPSRCHPAATCYNTPGSFSCRCQPGYY  857 (1289)
T ss_pred             CCceEEEeecCCccCCcc--ccccccccCccccCCCceEecCCCcceeecccCcc
Confidence            3 5789999999998764  47899999999999999999999999999999984

>KOG4289|consensus

Probab=99.18  E-value=5.5e-11  Score=86.58  Aligned_cols=109  Identities=36%  Similarity=0.879  Sum_probs=85.2

Q ss_pred             eeCCCCCCCCCCCCCCeee----------------------eCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCC
Q psy2856          18 VDINECAHPNACGVNALCQ----------------------NYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGP   75 (136)
Q Consensus        18 ~~~~~c~~~~~~~~~~~C~----------------------~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~   75 (136)
                      .|-+.|.. .||.++..|.                      +..+.+.|.|++||++..++  .+++.|-..+    |++
T Consensus      1177 fdDniClr-EPCenymkCvsvlrFdssapf~~s~s~lfRpi~pvnglrCrCPpGFTgd~Ce--TeiDlCYs~p----C~n 1249 (2531)
T KOG4289|consen 1177 FDDNICLR-EPCENYMKCVSVLRFDSSAPFLASDSVLFRPIHPVNGLRCRCPPGFTGDYCE--TEIDLCYSGP----CGN 1249 (2531)
T ss_pred             ccCchhhc-chhHHHHhhhhheeecccCccccccceeeeeccccCceeEeCCCCCCccccc--chhHhhhcCC----CCC
Confidence            34456664 5676666663                      34567899999999999876  5778888766    999


Q ss_pred             CCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCeeeec-CCCeeEeCCCC
Q psy2856          76 GARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNV-DGSYTCTCPPG  134 (136)
Q Consensus        76 ~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~~~-~g~~~c~C~~g  134 (136)
                      +..|....+.|.|.|.+||.|..+.- ......|.+..|.+++.|++. .|++.|.|+.|
T Consensus      1250 ng~C~srEggYtCeCrpg~tGehCEv-s~~agrCvpGvC~nggtC~~~~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1250 NGRCRSREGGYTCECRPGFTGEHCEV-SARAGRCVPGVCKNGGTCVNLLNGGFCCHCPYG 1308 (2531)
T ss_pred             CCceEEecCceeEEecCCccccceee-ecccCccccceecCCCEEeecCCCceeccCCCc
Confidence            99999999999999999999987642 123346888899999999976 57889999976

>KOG4289|consensus

Probab=98.73  E-value=1.3e-07  Score=69.93  Aligned_cols=86  Identities=34%  Similarity=0.772  Sum_probs=58.1

Q ss_pred             eeEEEeeeecceeeeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeec
Q psy2856           3 FRYSLIINISQFVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNF   82 (136)
Q Consensus         3 ~~~~~~~~~~~~~~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~   82 (136)
                      +++++...+++-.--.++|+|-. ++|++++.|...+|.|.|.|.+||.|..++.-.....|...    .|.++..|.+.
T Consensus      1222 lrCrCPpGFTgd~CeTeiDlCYs-~pC~nng~C~srEggYtCeCrpg~tGehCEvs~~agrCvpG----vC~nggtC~~~ 1296 (2531)
T KOG4289|consen 1222 LRCRCPPGFTGDYCETEIDLCYS-GPCGNNGRCRSREGGYTCECRPGFTGEHCEVSARAGRCVPG----VCKNGGTCVNL 1296 (2531)
T ss_pred             eeEeCCCCCCcccccchhHhhhc-CCCCCCCceEEecCceeEEecCCccccceeeecccCccccc----eecCCCEEeec
Confidence            35556566664422236888875 89999999999999999999999999765321222334332    26777777665


Q ss_pred             C-CCeeeeCCCC
Q psy2856          83 P-GGYHCECPPG   93 (136)
Q Consensus        83 ~-~~~~c~c~~g   93 (136)
                      . +.+.|.|+.|
T Consensus      1297 ~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1297 LNGGFCCHCPYG 1308 (2531)
T ss_pred             CCCceeccCCCc
Confidence            4 4566677655

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.70  E-value=1.7e-08  Score=45.58  Aligned_cols=34  Identities=50%  Similarity=1.075  Sum_probs=30.0

Q ss_pred             eCCCCCCC-CCCCCCCeeeeCCCCeEeeCCCCCcc
Q psy2856          19 DINECAHP-NACGVNALCQNYPGNYTCSCQPGYTG   52 (136)
Q Consensus        19 ~~~~c~~~-~~~~~~~~C~~~~g~~~C~c~~g~~~   52 (136)
                      |||||... +.|...+.|+|+.|+|.|.|++||..
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~   35 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYEL   35 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEE
Confidence            78999863 47888899999999999999999984

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.66  E-value=2.1e-08  Score=45.27  Aligned_cols=32  Identities=47%  Similarity=1.271  Sum_probs=27.8

Q ss_pred             eCCCCCCC--CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         105 DADECVNR--PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       105 ~~~~c~~~--~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ||+||...  .|...+.|+|+.|+|.|.|++||+
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYE   34 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcE
Confidence            57889875  577789999999999999999984

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG1214|consensus

Probab=98.58  E-value=5.6e-07  Score=63.56  Aligned_cols=107  Identities=37%  Similarity=0.934  Sum_probs=77.4

Q ss_pred             CCCCCCCeeeeCCC-CeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceee
Q psy2856          27 NACGVNALCQNYPG-NYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVD  105 (136)
Q Consensus        27 ~~~~~~~~C~~~~g-~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~  105 (136)
                      ..|...+.|....+ .|.|.|..||.+.+ +.|.+.++|....  ..|+....|++.+++++|.|..+|........|..
T Consensus       700 h~cdt~a~C~pg~~~~~tcecs~g~~gdg-r~c~d~~eca~~~--~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~  776 (1289)
T KOG1214|consen  700 HMCDTTARCHPGTGVDYTCECSSGYQGDG-RNCVDENECATGF--HRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVL  776 (1289)
T ss_pred             cccCCCccccCCCCcceEEEEeeccCCCC-CCCCChhhhccCC--CCCCCCceeecCCCceeEEEeecceeccCCcceEE
Confidence            34666777877653 78999999998877 4578888887654  24899999999999999999999987766555654


Q ss_pred             CC------CCCCC--CCCCC--Ceeeec-CCCeeEeCCCCCC
Q psy2856         106 AD------ECVNR--PCGKD--ALCSNV-DGSYTCTCPPGFR  136 (136)
Q Consensus       106 ~~------~c~~~--~~~~~--~~c~~~-~g~~~c~C~~g~~  136 (136)
                      +.      .|...  .|.-.  ..|+.. .+.|.|+|-+||.
T Consensus       777 i~~pap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfs  818 (1289)
T KOG1214|consen  777 ITPPAPANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFS  818 (1289)
T ss_pred             ecCCCCCCccccCccccCcCCceEEEecCCceEEEeecCCcc
Confidence            33      34433  44333  345444 3568999999984

>KOG1219|consensus

Probab=98.57  E-value=2.1e-07  Score=71.53  Aligned_cols=86  Identities=35%  Similarity=0.822  Sum_probs=68.5

Q ss_pred             eeeecceeeeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCee
Q psy2856           8 IINISQFVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYH   87 (136)
Q Consensus         8 ~~~~~~~~~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~   87 (136)
                      ...+++..--.++++|.. +||..++.|....+.|.|.|+.||+|..++. ..+++|..+.    |..++.|.+..++|.
T Consensus      3891 psqysG~~CEi~~epC~s-nPC~~GgtCip~~n~f~CnC~~gyTG~~Ce~-~Gi~eCs~n~----C~~gg~C~n~~gsf~ 3964 (4289)
T KOG1219|consen 3891 PSQYSGNHCEIDLEPCAS-NPCLTGGTCIPFYNGFLCNCPNGYTGKRCEA-RGISECSKNV----CGTGGQCINIPGSFH 3964 (4289)
T ss_pred             cccccCcccccccccccC-CCCCCCCEEEecCCCeeEeCCCCccCceeec-cccccccccc----ccCCceeeccCCceE
Confidence            333443333347888884 8999999999999999999999999987641 2377887655    999999999999999


Q ss_pred             eeCCCCceeCCC
Q psy2856          88 CECPPGYHGDAF   99 (136)
Q Consensus        88 c~c~~g~~~~~~   99 (136)
                      |.|.+||.+..+
T Consensus      3965 CncT~g~~gr~c 3976 (4289)
T KOG1219|consen 3965 CNCTPGILGRTC 3976 (4289)
T ss_pred             eccChhHhcccC
Confidence            999999987653

>KOG1217|consensus

Probab=98.36  E-value=1.1e-05  Score=54.78  Aligned_cols=113  Identities=47%  Similarity=1.073  Sum_probs=78.5

Q ss_pred             CCCC-CCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCC------ccc-----------CCcccCCCCCCCCCCC-Ceeee
Q psy2856          21 NECA-HPNACGVNALCQNYPGNYTCSCQPGYTGNPFEG------CID-----------IDECQYASTHPVCGPG-ARCTN   81 (136)
Q Consensus        21 ~~c~-~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~------c~~-----------~~~c~~~~~~~~c~~~-~~c~~   81 (136)
                      ++|. ....|.+...|.+..++|.|.|.++|.+.....      |..           ...|.....  .+... ..|..
T Consensus       170 ~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~~~~~c~~~~~--~~~~~~~~c~~  247 (487)
T KOG1217|consen  170 DECIQYSSPCQNGGTCVNTGGSYLCSCPPGYTGSTCETTGNGGTCVDSVACSCPPGARGPECEVSIV--ECASGDGTCVN  247 (487)
T ss_pred             cccccCCCCcCCCcccccCCCCeeEeCCCCccCCcCcCCCCCceEecceeccCCCCCCCCCcccccc--cccCCCCcccc
Confidence            5676 334688888999999999999999998875421      211           111111100  12211 56777


Q ss_pred             cCCCeeeeCCCCceeCCCCcceeeCCCCCCCC-CCCCCeeeecCCCeeEeCCCCCC
Q psy2856          82 FPGGYHCECPPGYHGDAFTTGCVDADECVNRP-CGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        82 ~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~-~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ..+.+.|.+..||.+... ..+.++++|.... +...+.|++..+.|.|.|++||.
T Consensus       248 ~~~~~~C~~~~g~~~~~~-~~~~~~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~  302 (487)
T KOG1217|consen  248 TVGSYTCRCPEGYTGDAC-VTCVDVDSCALIASCPNGGTCVNVPGSYRCTCPPGFT  302 (487)
T ss_pred             cCCceeeeCCCCcccccc-ceeeeccccCCCCccCCCCeeecCCCcceeeCCCCCC
Confidence            777889999999987652 2356788888764 77789999998889999999984

>KOG1217|consensus

Probab=98.34  E-value=9.3e-06  Score=55.19  Aligned_cols=116  Identities=41%  Similarity=1.045  Sum_probs=80.0

Q ss_pred             eeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCee--eecCCCeeeeCCCC
Q psy2856          16 VFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARC--TNFPGGYHCECPPG   93 (136)
Q Consensus        16 ~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c--~~~~~~~~c~c~~g   93 (136)
                      .+.++++|....+|.+.+.|.+..+.|.|.|.+||.+.....+.+...|........|..+..|  ......+.|.+..+
T Consensus       267 ~~~~~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~g~~~~~~~~~~~C~~~~~~~~c~~g~~C~~~~~~~~~~C~c~~~  346 (487)
T KOG1217|consen  267 TCVDVDSCALIASCPNGGTCVNVPGSYRCTCPPGFTGRLCTECVDVDECSPRNAGGPCANGGTCNTLGSFGGFRCACGPG  346 (487)
T ss_pred             eeeeccccCCCCccCCCCeeecCCCcceeeCCCCCCCCCCccccccccccccccCCcCCCCcccccCCCCCCCCcCCCCC
Confidence            5678999986334888899999998899999999999865223444555421111125555566  22334566888877


Q ss_pred             ceeCCCCcceeeC-CCCCCCCCCCCCeeee-cCCCeeEeCCCCC
Q psy2856          94 YHGDAFTTGCVDA-DECVNRPCGKDALCSN-VDGSYTCTCPPGF  135 (136)
Q Consensus        94 ~~~~~~~~~~~~~-~~c~~~~~~~~~~c~~-~~g~~~c~C~~g~  135 (136)
                      +.+..    |.+. ++|....+...+.|++ ..+.+.|.|+.+|
T Consensus       347 ~~g~~----C~~~~~~C~~~~~~~~~~c~~~~~~~~~c~~~~~~  386 (487)
T KOG1217|consen  347 FTGRR----CEDSNDECASSPCCPGGTCVNETPGSYRCACPAGF  386 (487)
T ss_pred             CCCCc----cccCCccccCCccccCCEeccCCCCCeEecCCCcc
Confidence            55443    4455 4787777777889998 6889999999876

>KOG4260|consensus

Probab=98.32  E-value=3.9e-07  Score=56.38  Aligned_cols=75  Identities=31%  Similarity=0.686  Sum_probs=54.7

Q ss_pred             ceeeeeeCCCCCC-CCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCccc-CCcccCCCCCCCCCCCCeeeecCCCeeeeC
Q psy2856          13 QFVVFVDINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCID-IDECQYASTHPVCGPGARCTNFPGGYHCEC   90 (136)
Q Consensus        13 ~~~~c~~~~~c~~-~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~-~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c   90 (136)
                      .+..|.|||+|.. +.+|.....|+|+.|+|.|..++||.... ..|.- .+.|.        .....|.+..+.|+|+|
T Consensus       229 de~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~g~-d~C~~~~d~~~--------~kn~~c~ni~~~~r~v~  299 (350)
T KOG4260|consen  229 DEEGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKKGV-DECQFCADVCA--------SKNRPCMNIDGQYRCVC  299 (350)
T ss_pred             cccccccHHHHhcCCCCCChhheeecCCCceEecccccccCCh-HHhhhhhhhcc--------cCCCCcccCCccEEEEe
Confidence            4678999999984 56899999999999999999999998742 11211 11222        22346777888999999


Q ss_pred             CCCcee
Q psy2856          91 PPGYHG   96 (136)
Q Consensus        91 ~~g~~~   96 (136)
                      ..++..
T Consensus       300 f~~~~~  305 (350)
T KOG4260|consen  300 FSGLII  305 (350)
T ss_pred             ccccee
Confidence            888753

>KOG4260|consensus

Probab=98.20  E-value=1.8e-06  Score=53.59  Aligned_cols=106  Identities=32%  Similarity=0.703  Sum_probs=66.9

Q ss_pred             CCCCCCeeeeC---CCCeEeeCCCCCccCCCCCcccCCc-ccCCCCCCC---CC--CCCeeeecCCCeee-eCCCCceeC
Q psy2856          28 ACGVNALCQNY---PGNYTCSCQPGYTGNPFEGCIDIDE-CQYASTHPV---CG--PGARCTNFPGGYHC-ECPPGYHGD   97 (136)
Q Consensus        28 ~~~~~~~C~~~---~g~~~C~c~~g~~~~~~~~c~~~~~-c~~~~~~~~---c~--~~~~c~~~~~~~~c-~c~~g~~~~   97 (136)
                      +|.-++.|...   .|+-.|.|..||.|..+..|..... -.....+-.   |.  ....|.. ..+..| .|..||...
T Consensus       151 ~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~~Cg~eyfes~Rne~~lvCt~Ch~~C~~~Csg-~~~k~C~kCkkGW~ld  229 (350)
T KOG4260|consen  151 PCFGNGSCHGDGSREGSGKCKCETGYTGPLCRYCGIEYFESSRNEQHLVCTACHEGCLGVCSG-ESSKGCSKCKKGWKLD  229 (350)
T ss_pred             CcCCCCcccCCCCCCCCCcccccCCCCCccccccchHHHHhhcccccchhhhhhhhhhcccCC-CCCCChhhhcccceec
Confidence            56666777542   3677999999999987655532100 000000000   10  1123422 222345 588999876


Q ss_pred             CCCcceeeCCCCCCC--CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856          98 AFTTGCVDADECVNR--PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        98 ~~~~~~~~~~~c~~~--~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      .  ..|.||+||...  .|...+.|+|+.|+|.|.+.+||.
T Consensus       230 e--~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~  268 (350)
T KOG4260|consen  230 E--EGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYK  268 (350)
T ss_pred             c--cccccHHHHhcCCCCCChhheeecCCCceEeccccccc
Confidence            4  348999999865  788889999999999999988873

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=98.19  E-value=5.5e-06  Score=36.49  Aligned_cols=33  Identities=52%  Similarity=1.123  Sum_probs=27.6

Q ss_pred             eCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCc
Q psy2856          19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYT   51 (136)
Q Consensus        19 ~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~   51 (136)
                      ++++|....+|.+.+.|.++.++|.|.|..||.
T Consensus         1 d~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~   33 (39)
T smart00179        1 DIDECASGNPCQNGGTCVNTVGSYRCECPPGYT   33 (39)
T ss_pred             CcccCcCCCCcCCCCEeECCCCCeEeECCCCCc
Confidence            467786435788888999999999999999997

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.99  E-value=1.6e-05  Score=34.97  Aligned_cols=31  Identities=48%  Similarity=1.244  Sum_probs=25.4

Q ss_pred             CCCCCC-CCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         106 ADECVN-RPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       106 ~~~c~~-~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      +++|.. ..|...+.|+++.++|.|.|++||.
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~   33 (39)
T smart00179        2 IDECASGNPCQNGGTCVNTVGSYRCECPPGYT   33 (39)
T ss_pred             cccCcCCCCcCCCCEeECCCCCeEeECCCCCc
Confidence            456766 5677777999999999999999984

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=97.97  E-value=9.5e-06  Score=31.66  Aligned_cols=24  Identities=46%  Similarity=1.036  Sum_probs=20.3

Q ss_pred             CeeeeCCCCceeCCCCcceeeCCC
Q psy2856          85 GYHCECPPGYHGDAFTTGCVDADE  108 (136)
Q Consensus        85 ~~~c~c~~g~~~~~~~~~~~~~~~  108 (136)
                      +|.|.|+.||...+....|.||+|
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccccCCC
Confidence            478999999998877778888875

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.91  E-value=8.3e-06  Score=34.40  Aligned_cols=27  Identities=52%  Similarity=1.277  Sum_probs=24.7

Q ss_pred             CCCCCCCeeeeCC-CCeEeeCCCCCccC
Q psy2856          27 NACGVNALCQNYP-GNYTCSCQPGYTGN   53 (136)
Q Consensus        27 ~~~~~~~~C~~~~-g~~~C~c~~g~~~~   53 (136)
                      ++|.+++.|+... +.|.|.|.+||.|.
T Consensus         4 ~~C~n~g~C~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    4 NPCQNGGTCIDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             TSSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred             CcCCCCeEEEeCCCCCEEeECCCCCccC
Confidence            6899999999999 99999999999874

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.85  E-value=5.9e-05  Score=32.75  Aligned_cols=34  Identities=53%  Similarity=1.131  Sum_probs=27.4

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccC
Q psy2856          20 INECAHPNACGVNALCQNYPGNYTCSCQPGYTGN   53 (136)
Q Consensus        20 ~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~   53 (136)
                      +++|....+|.+.+.|.+..+.|.|.|..||.+.
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~   35 (38)
T cd00054           2 IDECASGNPCQNGGTCVNTVGSYRCSCPPGYTGR   35 (38)
T ss_pred             cccCCCCCCcCCCCEeECCCCCeEeECCCCCcCC
Confidence            5677632467778899999999999999999874

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=97.76  E-value=1.1e-05  Score=47.55  Aligned_cols=100  Identities=28%  Similarity=0.659  Sum_probs=63.3

Q ss_pred             CCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccC-CCCCCCCCCCCeeeecC-----CCeeeeCCCCceeCCCCcceee
Q psy2856          32 NALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQY-ASTHPVCGPGARCTNFP-----GGYHCECPPGYHGDAFTTGCVD  105 (136)
Q Consensus        32 ~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~-~~~~~~c~~~~~c~~~~-----~~~~c~c~~g~~~~~~~~~~~~  105 (136)
                      ++..+++.++|.|.|..||......+|....+|.. .....+|+..+.|....     ..+.|.|..||......  |. 
T Consensus        10 NG~LiQMSNHfEC~Cnegfvl~~EntCE~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~v--Cv-   86 (197)
T PF06247_consen   10 NGYLIQMSNHFECKCNEGFVLKNENTCEEKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQGV--CV-   86 (197)
T ss_dssp             TEEEEEESSEEEEEESTTEEEEETTEEEE----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESSSS--EE-
T ss_pred             CCEEEEccCceEEEcCCCcEEccccccccceecCcccccCccccchhhhhcCCCcccceeEEEecccCceeeCCe--Ec-
Confidence            46678888999999999998877677888877765 23233577777887654     46899999999976542  43 


Q ss_pred             CCCCCCCCCCCCCeeeecC---CCeeEeCCCCC
Q psy2856         106 ADECVNRPCGKDALCSNVD---GSYTCTCPPGF  135 (136)
Q Consensus       106 ~~~c~~~~~~~~~~c~~~~---g~~~c~C~~g~  135 (136)
                      ..+|....|. .+.|+..+   ....|+|..|+
T Consensus        87 p~~C~~~~Cg-~GKCI~d~~~~~~~~CSC~IGk  118 (197)
T PF06247_consen   87 PNKCNNKDCG-SGKCILDPDNPNNPTCSCNIGK  118 (197)
T ss_dssp             EGGGSS---T-TEEEEEEEGGGSEEEEEE-TEE
T ss_pred             hhhcCceecC-CCeEEecCCCCCCceeEeeece
Confidence            2356655666 57887432   23478887664

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=97.74  E-value=1.7e-05  Score=34.32  Aligned_cols=24  Identities=46%  Similarity=1.214  Sum_probs=19.5

Q ss_pred             CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         113 PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       113 ~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ....++.|++++++|.|.|++||.
T Consensus         5 NGgC~h~C~~~~g~~~C~C~~Gy~   28 (36)
T PF14670_consen    5 NGGCSHICVNTPGSYRCSCPPGYK   28 (36)
T ss_dssp             GGGSSSEEEEETTSEEEE-STTEE
T ss_pred             CCCcCCCCccCCCceEeECCCCCE
Confidence            445678999999999999999983

...

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.68  E-value=2.7e-05  Score=32.79  Aligned_cols=28  Identities=43%  Similarity=1.305  Sum_probs=23.2

Q ss_pred             CCCCCCCCCCeeeecC-CCeeEeCCCCCC
Q psy2856         109 CVNRPCGKDALCSNVD-GSYTCTCPPGFR  136 (136)
Q Consensus       109 c~~~~~~~~~~c~~~~-g~~~c~C~~g~~  136 (136)
                      |.+..|.+++.|++.. +.|.|.|++||.
T Consensus         1 C~~~~C~n~g~C~~~~~~~y~C~C~~G~~   29 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLPGGGYTCECPPGYT   29 (32)
T ss_dssp             TTTTSSTTTEEEEEESTSEEEEEEBTTEE
T ss_pred             CCCCcCCCCeEEEeCCCCCEEeECCCCCc
Confidence            3445788889999998 999999999983

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=97.65  E-value=7.8e-05  Score=29.08  Aligned_cols=23  Identities=61%  Similarity=1.221  Sum_probs=17.0

Q ss_pred             CeEeeCCCCCccCCC-CCcccCCc
Q psy2856          41 NYTCSCQPGYTGNPF-EGCIDIDE   63 (136)
Q Consensus        41 ~~~C~c~~g~~~~~~-~~c~~~~~   63 (136)
                      +|.|.|++||..... ..|.++++
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccccCCC
Confidence            589999999987643 55666653

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.59  E-value=5.3e-05  Score=32.78  Aligned_cols=28  Identities=50%  Similarity=1.175  Sum_probs=22.3

Q ss_pred             CCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          27 NACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        27 ~~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      ..|...+.|.++.++|.|.|++||.|+.
T Consensus         6 ~~C~~nA~C~~~~~~~~C~C~~Gy~GdG   33 (36)
T PF12947_consen    6 GGCHPNATCTNTGGSYTCTCKPGYEGDG   33 (36)
T ss_dssp             GGS-TTCEEEE-TTSEEEEE-CEEECCS
T ss_pred             CCCCCCcEeecCCCCEEeECCCCCccCC
Confidence            3577889999999999999999999875

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.50  E-value=0.00025  Score=30.68  Aligned_cols=31  Identities=48%  Similarity=1.262  Sum_probs=24.1

Q ss_pred             CCCCCC-CCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         106 ADECVN-RPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       106 ~~~c~~-~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      +++|.. ..|...+.|++..+.|.|.|+.||.
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~   33 (38)
T cd00054           2 IDECASGNPCQNGGTCVNTVGSYRCSCPPGYT   33 (38)
T ss_pred             cccCCCCCCcCCCCEeECCCCCeEeECCCCCc
Confidence            345655 4666678999999999999999874

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=97.27  E-value=0.0009  Score=28.38  Aligned_cols=27  Identities=52%  Similarity=1.271  Sum_probs=23.5

Q ss_pred             CCCCCCCeeeeCCCCeEeeCCCCCccC
Q psy2856          27 NACGVNALCQNYPGNYTCSCQPGYTGN   53 (136)
Q Consensus        27 ~~~~~~~~C~~~~g~~~C~c~~g~~~~   53 (136)
                      .+|.+++.|.+..+.|.|.|..||.+.
T Consensus         6 ~~C~~~~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053           6 NPCSNGGTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCEEecCCCCeEeECCCCCccc
Confidence            567778899999999999999999876

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=97.19  E-value=0.0011  Score=28.14  Aligned_cols=25  Identities=48%  Similarity=1.326  Sum_probs=20.7

Q ss_pred             CCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         112 RPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       112 ~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ..|..++.|++..+.+.|.|+.||.
T Consensus         6 ~~C~~~~~C~~~~~~~~C~C~~g~~   30 (36)
T cd00053           6 NPCSNGGTCVNTPGSYRCVCPPGYT   30 (36)
T ss_pred             CCCCCCCEEecCCCCeEeECCCCCc
Confidence            3566668999999999999999984

>smart00181 EGF Epidermal growth factor-like domain

Probab=97.11  E-value=0.0013  Score=27.94  Aligned_cols=23  Identities=57%  Similarity=1.479  Sum_probs=19.3

Q ss_pred             CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         113 PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       113 ~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      .|..+ .|++..+++.|.|++||.
T Consensus         7 ~C~~~-~C~~~~~~~~C~C~~g~~   29 (35)
T smart00181        7 PCSNG-TCINTPGSYTCSCPPGYT   29 (35)
T ss_pred             CCCCC-EEECCCCCeEeECCCCCc
Confidence            56555 899999999999999984

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.07  E-value=0.00036  Score=30.19  Aligned_cols=24  Identities=54%  Similarity=1.273  Sum_probs=18.6

Q ss_pred             CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         113 PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       113 ~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      .|+.++.|+++.+++.|+|.+||.
T Consensus         7 ~C~~nA~C~~~~~~~~C~C~~Gy~   30 (36)
T PF12947_consen    7 GCHPNATCTNTGGSYTCTCKPGYE   30 (36)
T ss_dssp             GS-TTCEEEE-TTSEEEEE-CEEE
T ss_pred             CCCCCcEeecCCCCEEeECCCCCc
Confidence            577889999999999999999873

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.98  E-value=0.0023  Score=27.21  Aligned_cols=26  Identities=58%  Similarity=1.340  Sum_probs=21.7

Q ss_pred             CCCCCCCeeeeCCCCeEeeCCCCCccC
Q psy2856          27 NACGVNALCQNYPGNYTCSCQPGYTGN   53 (136)
Q Consensus        27 ~~~~~~~~C~~~~g~~~C~c~~g~~~~   53 (136)
                      .+|.++ .|.+..++|.|.|..||.+.
T Consensus         6 ~~C~~~-~C~~~~~~~~C~C~~g~~g~   31 (35)
T smart00181        6 GPCSNG-TCINTPGSYTCSCPPGYTGD   31 (35)
T ss_pred             CCCCCC-EEECCCCCeEeECCCCCccC
Confidence            356666 89999999999999999873

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=96.59  E-value=0.0052  Score=26.53  Aligned_cols=25  Identities=44%  Similarity=1.018  Sum_probs=19.5

Q ss_pred             CCeeeecCCCeeeeCCCCceeCCCC
Q psy2856          76 GARCTNFPGGYHCECPPGYHGDAFT  100 (136)
Q Consensus        76 ~~~c~~~~~~~~c~c~~g~~~~~~~  100 (136)
                      ...|++..+++.|.|+.||.+....
T Consensus         9 ~h~C~~~~g~~~C~C~~Gy~L~~D~   33 (36)
T PF14670_consen    9 SHICVNTPGSYRCSCPPGYKLAEDG   33 (36)
T ss_dssp             SSEEEEETTSEEEE-STTEEE-TTS
T ss_pred             CCCCccCCCceEeECCCCCEECcCC
Confidence            4689999999999999999886543

...

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=96.55  E-value=0.0033  Score=38.99  Aligned_cols=40  Identities=33%  Similarity=0.687  Sum_probs=31.3

Q ss_pred             ceeeeeeCCCCCCCC-CCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          13 QFVVFVDINECAHPN-ACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        13 ~~~~c~~~~~c~~~~-~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      ....|.++++|...+ .|  ...|.++.|+|.|.|.+||....
T Consensus       180 ~~~~C~~~~~C~~~~~~c--~~~C~~~~g~~~c~c~~g~~~~~  220 (224)
T cd01475         180 QGKICVVPDLCATLSHVC--QQVCISTPGSYLCACTEGYALLE  220 (224)
T ss_pred             ccccCcCchhhcCCCCCc--cceEEcCCCCEEeECCCCccCCC
Confidence            346788899997532 44  46899999999999999997653

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=96.52  E-value=0.0031  Score=39.10  Aligned_cols=35  Identities=31%  Similarity=0.711  Sum_probs=28.2

Q ss_pred             ceeeCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         102 GCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       102 ~~~~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      .|.+.++|......+.+.|.++.|+|.|.|+.||.
T Consensus       183 ~C~~~~~C~~~~~~c~~~C~~~~g~~~c~c~~g~~  217 (224)
T cd01475         183 ICVVPDLCATLSHVCQQVCISTPGSYLCACTEGYA  217 (224)
T ss_pred             cCcCchhhcCCCCCccceEEcCCCCEEeECCCCcc
Confidence            46677888765545568999999999999999984

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=96.27  E-value=0.0044  Score=36.87  Aligned_cols=114  Identities=30%  Similarity=0.686  Sum_probs=63.9

Q ss_pred             ceeeeeeCCCCCCC----CCCCCCCeeeeCC-----CCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecC
Q psy2856          13 QFVVFVDINECAHP----NACGVNALCQNYP-----GNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFP   83 (136)
Q Consensus        13 ~~~~c~~~~~c~~~----~~~~~~~~C~~~~-----g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~   83 (136)
                      .+.+|....+|...    .+|+..+.|.+..     ..|.|.|.+||..... .|.+ ..|....    |+. +.|+...
T Consensus        32 ~EntCE~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~-vCvp-~~C~~~~----Cg~-GKCI~d~  104 (197)
T PF06247_consen   32 NENTCEEKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQG-VCVP-NKCNNKD----CGS-GKCILDP  104 (197)
T ss_dssp             ETTEEEE----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESSS-SEEE-GGGSS-------TT-EEEEEEE
T ss_pred             cccccccceecCcccccCccccchhhhhcCCCcccceeEEEecccCceeeCC-eEch-hhcCcee----cCC-CeEEecC
Confidence            57899988888752    2688889998765     4689999999987653 3432 3455443    763 5776432


Q ss_pred             ---CCeeeeCCCCceeCCCCcceee--CCCCCCCCCCCCCeeeecCCCeeEeCCCCC
Q psy2856          84 ---GGYHCECPPGYHGDAFTTGCVD--ADECVNRPCGKDALCSNVDGSYTCTCPPGF  135 (136)
Q Consensus        84 ---~~~~c~c~~g~~~~~~~~~~~~--~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~  135 (136)
                         ....|+|.-|+...... .|.-  -.+|.. .|..+..|..+.+-|.|.+..++
T Consensus       105 ~~~~~~~CSC~IGkV~~dn~-kCtk~G~T~C~L-KCk~nE~CK~~~~~Y~C~~~~~~  159 (197)
T PF06247_consen  105 DNPNNPTCSCNIGKVPDDNK-KCTKTGETKCSL-KCKENEECKLVDGYYKCVCKEGF  159 (197)
T ss_dssp             GGGSEEEEEE-TEEETTTTT-ESEEEE---------TTTEEEEEETTEEEEEE-TT-
T ss_pred             CCCCCceeEeeeceEeccCC-cccCCCccceee-ecCCCcceeeeCcEEEeecCCCC
Confidence               24489999998832221 1221  123332 45667889999988999988765

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>KOG1225|consensus

Probab=95.80  E-value=0.055  Score=37.83  Aligned_cols=70  Identities=36%  Similarity=0.983  Sum_probs=36.2

Q ss_pred             EeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCeeee
Q psy2856          43 TCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSN  122 (136)
Q Consensus        43 ~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~~  122 (136)
                      +|.|.+||.|..+..    -.|..     .|..+..+  ..+  .|.|.++|.+..+..     ..| +.+|..++.|+ 
T Consensus       266 ~CIC~~Gf~G~dC~e----~~Cp~-----~cs~~g~~--~~g--~CiC~~g~~G~dCs~-----~~c-padC~g~G~Ci-  325 (525)
T KOG1225|consen  266 RCICPPGFTGDDCDE----LVCPV-----DCSGGGVC--VDG--ECICNPGYSGKDCSI-----RRC-PADCSGHGKCI-  325 (525)
T ss_pred             eEeCCCCCcCCCCCc----ccCCc-----ccCCCcee--cCC--EeecCCCcccccccc-----ccC-CccCCCCCccc-
Confidence            688889988876531    11221     12222222  222  678888888776531     112 13455555665 


Q ss_pred             cCCCeeEeCCCCC
Q psy2856         123 VDGSYTCTCPPGF  135 (136)
Q Consensus       123 ~~g~~~c~C~~g~  135 (136)
                       .|  .|.|.+||
T Consensus       326 -~G--~C~C~~Gy  335 (525)
T KOG1225|consen  326 -DG--ECLCDEGY  335 (525)
T ss_pred             -CC--ceEeCCCC
Confidence             11  45565555

>KOG1225|consensus

Probab=95.03  E-value=0.15  Score=35.77  Aligned_cols=45  Identities=36%  Similarity=0.954  Sum_probs=31.1

Q ss_pred             EeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCC
Q psy2856          43 TCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFT  100 (136)
Q Consensus        43 ~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~  100 (136)
                      .|.|.+||+|..+.   .. .|. .+    |.....|+  .+  .|.|.+||.+..+.
T Consensus       297 ~CiC~~g~~G~dCs---~~-~cp-ad----C~g~G~Ci--~G--~C~C~~Gy~G~~C~  341 (525)
T KOG1225|consen  297 ECICNPGYSGKDCS---IR-RCP-AD----CSGHGKCI--DG--ECLCDEGYTGELCI  341 (525)
T ss_pred             EeecCCCccccccc---cc-cCC-cc----CCCCCccc--CC--ceEeCCCCcCCccc
Confidence            89999999998652   11 132 12    66667786  22  78999999987754

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=94.27  E-value=0.026  Score=18.53  Aligned_cols=12  Identities=58%  Similarity=1.417  Sum_probs=8.3

Q ss_pred             EeeCCCCCccCC
Q psy2856          43 TCSCQPGYTGNP   54 (136)
Q Consensus        43 ~C~c~~g~~~~~   54 (136)
                      .|.|.+||.|..
T Consensus         1 ~C~C~~G~~G~~   12 (13)
T PF12661_consen    1 TCQCPPGWTGPN   12 (13)
T ss_dssp             EEEE-TTEETTT
T ss_pred             CccCcCCCcCCC
Confidence            478899998763

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=93.23  E-value=0.057  Score=23.34  Aligned_cols=28  Identities=36%  Similarity=0.731  Sum_probs=20.0

Q ss_pred             CCCCCCCeeeeCC-CCeEeeCCCCCccCC
Q psy2856          27 NACGVNALCQNYP-GNYTCSCQPGYTGNP   54 (136)
Q Consensus        27 ~~~~~~~~C~~~~-g~~~C~c~~g~~~~~   54 (136)
                      ..|..++.|++.. |+..|.|..||+...
T Consensus         5 ~~cP~NA~C~~~~dG~eecrCllgyk~~~   33 (37)
T PF12946_consen    5 TKCPANAGCFRYDDGSEECRCLLGYKKVG   33 (37)
T ss_dssp             S---TTEEEEEETTSEEEEEE-TTEEEET
T ss_pred             ccCCCCcccEEcCCCCEEEEeeCCccccC
Confidence            4566788999887 999999999997643

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=92.39  E-value=0.25  Score=27.04  Aligned_cols=33  Identities=30%  Similarity=0.827  Sum_probs=24.3

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccC
Q psy2856          20 INECAHPNACGVNALCQNYPGNYTCSCQPGYTGN   53 (136)
Q Consensus        20 ~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~   53 (136)
                      .++|.....|+..+.|.. .....|.|.+||...
T Consensus        77 ~d~Cd~y~~CG~~g~C~~-~~~~~C~Cl~GF~P~  109 (110)
T PF00954_consen   77 KDQCDVYGFCGPNGICNS-NNSPKCSCLPGFEPK  109 (110)
T ss_pred             ccCCCCccccCCccEeCC-CCCCceECCCCcCCC
Confidence            456765567999999943 345679999999653

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=91.01  E-value=0.54  Score=19.62  Aligned_cols=25  Identities=32%  Similarity=0.736  Sum_probs=19.2

Q ss_pred             CCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          28 ACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        28 ~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      .|..+++|...  ...|.|.+||.|..
T Consensus         7 ~C~~~G~C~~~--~g~C~C~~g~~G~~   31 (32)
T PF07974_consen    7 ICSGHGTCVSP--CGRCVCDSGYTGPD   31 (32)
T ss_pred             ccCCCCEEeCC--CCEEECCCCCcCCC
Confidence            47778889765  34899999998863

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>KOG1226|consensus

Probab=83.56  E-value=7.8  Score=28.92  Aligned_cols=22  Identities=36%  Similarity=0.984  Sum_probs=14.7

Q ss_pred             CeeeeCCCCeE---eeCCCCCccCCC
Q psy2856          33 ALCQNYPGNYT---CSCQPGYTGNPF   55 (136)
Q Consensus        33 ~~C~~~~g~~~---C~c~~g~~~~~~   55 (136)
                      ..|. ..|.+.   |.|.+||.|..+
T Consensus       467 ~~C~-g~G~~~CG~C~C~~G~~G~~C  491 (783)
T KOG1226|consen  467 ALCH-GNGTFVCGQCRCDEGWLGKKC  491 (783)
T ss_pred             cccC-CCCcEEecceecCCCCCCCcc
Confidence            3454 345554   689999998765

>KOG3516|consensus

Probab=80.29  E-value=1.9  Score=33.45  Aligned_cols=40  Identities=25%  Similarity=0.664  Sum_probs=32.3

Q ss_pred             eeeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCC-CCCccCCC
Q psy2856          15 VVFVDINECAHPNACGVNALCQNYPGNYTCSCQ-PGYTGNPF   55 (136)
Q Consensus        15 ~~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~-~g~~~~~~   55 (136)
                      ..|.-++.|. |++|++++.|......|.|.|. .||+|..+
T Consensus       540 d~C~i~drCl-PN~CehgG~C~Qs~~~f~C~C~~TGY~GatC  580 (1306)
T KOG3516|consen  540 DMCGISDRCL-PNPCEHGGKCSQSWDDFECNCELTGYKGATC  580 (1306)
T ss_pred             cccccccccC-CccccCCCcccccccceeEeccccccccccc
Confidence            4455566676 5899999999998899999998 88888654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	136
1lmj_A	86	Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2		4e-09
1lmj_A	86	Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2		2e-08
2vj3_A	135	Human Notch-1 Egfs 11-13 Length = 135		7e-09
2bo2_A	143	Egf Domains 1,2,5 Of Human Emr2, A 7-Tm Immune Syst		1e-08
1toz_A	116	Nmr Structure Of The Human Notch-1 Ligand Binding R		1e-08
1z6c_A	87	Solution Structure Of An Egf Pair (Egf34) From Vita		3e-08
1emn_A	82	Nmr Study Of A Pair Of Fibrillin Ca2+ Binding Epide		5e-07
1n7d_A	699	Extracellular Domain Of The Ldl Receptor Length = 6		1e-05
1n7d_A	699	Extracellular Domain Of The Ldl Receptor Length = 6		8e-04
1hz8_A	82	Solution Structure And Backbone Dynamics Of A Conca		2e-05
3m0c_C	791	The X-Ray Crystal Structure Of Pcsk9 In Complex Wit		2e-05
3m0c_C	791	The X-Ray Crystal Structure Of Pcsk9 In Complex Wit		9e-04
3p5c_L	440	The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE		2e-05
3p5c_L	440	The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE		6e-04
1hj7_A	80	Nmr Study Of A Pair Of Ldl Receptor Ca2+ Binding Ep		2e-05
3p5b_L	400	The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE		2e-05
3p5b_L	400	The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE		5e-04
3bps_E	83	Pcsk9:egf-a Complex Length = 83		3e-05
2w2m_E	107	Wt Pcsk9-Deltac Bound To Wt Egf-A Of Ldlr Length =		3e-05
3gcw_E	83	Pcsk9:egfa(H306y) Length = 83		3e-05
2w2n_E	107	Wt Pcsk9-Deltac Bound To Egf-A H306y Mutant Of Ldlr		3e-05

>pdb|1LMJ|A Chain A, Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2+ Binding Epidermal Growth Factor-like Domains Length = 86

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 19  DINECA-HPNACGVNALCQNYPGNYTCSCQPGYTGN--PFEGCIDIDECQYASTHPVCGP 75
           DI+EC   P+ CG    C N PG++ C C  GY       + C+DIDECQ     P+   
Sbjct: 2   DIDECRISPDLCG-RGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQ---RDPLLCR 57
Query: 76  GARCTNFPGGYHCECPPGYHGDAFTTGCV 104
           G  C N  G Y CECPPG+      + C+
Sbjct: 58  GGVCHNTEGSYRCECPPGHQLSPNISACI 86

>pdb|1LMJ|A Chain A, Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2+ Binding Epidermal Growth Factor-like Domains Length = 86

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 60  DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYH-GDAFTTGCVDADECVNRPCG-KD 117
           DIDEC+ +    +CG G +C N PG + C+C  GY  G      C+D DEC   P   + 
Sbjct: 2   DIDECRISPD--LCGRG-QCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRG 58
Query: 118 ALCSNVDGSYTCTCPPGFR 136
            +C N +GSY C CPPG +
Sbjct: 59  GVCHNTEGSYRCECPPGHQ 77

>pdb|2VJ3|A Chain A, Human Notch-1 Egfs 11-13 Length = 135

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 19  DINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA 77
           D++EC+   N C     C N  G++ C C  GYTG   E  ID++EC    ++P C   A
Sbjct: 4   DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCE--IDVNEC---VSNP-CQNDA 57
Query: 78  RCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
            C +  G + C C PGY G       V+ DEC + PC  +  C +    + C CP GF
Sbjct: 58  TCLDQIGEFQCICMPGYEGVHCE---VNTDECASSPCLHNGRCLDKINEFQCECPTGF 112

>pdb|2BO2|A Chain A, Egf Domains 1,2,5 Of Human Emr2, A 7-Tm Immune System Molecule, In Complex With Calcium. Length = 143

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 48/109 (44%), Gaps = 17/109 (15%)
Query: 44  CSCQPGYTG------NPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYH-- 95
           C C PG++        P E C DI+EC   S    CG  + C N  G Y C C PGY   
Sbjct: 21  CRCNPGFSSFSEIITTPMETCDDINECATLS-KVSCGKFSDCWNTEGSYDCVCSPGYEPV 79
Query: 96  ------GDAFTTGCVDADECVN--RPCGKDALCSNVDGSYTCTCPPGFR 136
                  +     C D DEC +    C    +C N  GSY+C C PG++
Sbjct: 80  SGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWK 128

>pdb|1TOZ|A Chain A, Nmr Structure Of The Human Notch-1 Ligand Binding Region Length = 116

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 19  DINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA 77
           D++EC+   N C     C N  G++ C C  GYTG   E  ID++EC    ++P C   A
Sbjct: 2   DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCE--IDVNEC---VSNP-CQNDA 55
Query: 78  RCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
            C +  G + C C PGY G       V+ DEC + PC  +  C +    + C CP GF
Sbjct: 56  TCLDQIGEFQCICMPGYEGVHCE---VNTDECASSPCLHNGRCLDKINEFQCECPTGF 110

>pdb|1Z6C|A Chain A, Solution Structure Of An Egf Pair (Egf34) From Vitamin K- Dependent Protein S Length = 87

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 60  DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDAL 119
           D+DEC    +  +CG  A C N PG + CECP GY  +  +  C D DEC    C +  L
Sbjct: 2   DVDECSLKPS--ICGT-AVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCAQ--L 56
Query: 120 CSNVDGSYTCTC--PPGFR 136
           C N  G YTC C    GF+
Sbjct: 57  CVNYPGGYTCYCDGKKGFK 75

>pdb|1EMN|A Chain A, Nmr Study Of A Pair Of Fibrillin Ca2+ Binding Epidermal Growth Factor-Like Domains, Minimized Average Structure Length = 82

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 59  IDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADEC-VNRPCGKD 117
           +D+DEC+      VC  G +C N  G Y CECP GY        CVD DEC V  PCG +
Sbjct: 3   VDMDECKEPD---VCKHG-QCINTDGSYRCECPFGYI--LAGNECVDTDECSVGNPCG-N 55
Query: 118 ALCSNVDGSYTCTCPPGFR 136
             C NV G + CTC  GF 
Sbjct: 56  GTCKNVIGGFECTCEEGFE 74

>pdb|1N7D|A Chain A, Extracellular Domain Of The Ldl Receptor Length = 699

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 21  NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT 80
           NEC   N  G + +C +    Y C C  G+       C DIDECQ   T         C 
Sbjct: 295 NECLDNNG-GCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDT-----CSQLCV 348
Query: 81  NFPGGYHCECPPGYHGDAFTTGC 103
           N  GGY C+C  G+  D  T  C
Sbjct: 349 NLEGGYKCQCEEGFQLDPHTKAC 371

>pdb|1N7D|A Chain A, Extracellular Domain Of The Ldl Receptor Length = 699

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 79  CTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
           C +   GY C CP G+   A    C D DEC + P     LC N++G Y C C  GF+
Sbjct: 308 CNDLKIGYECLCPDGFQLVA-QRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQ 363

>pdb|1HZ8|A Chain A, Solution Structure And Backbone Dynamics Of A Concatemer Of Egf-Homology Modules Of The Human Low Density Lipoprotein Receptor Length = 82

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 21  NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT 80
           NEC   N  G + +C +    Y C C  G+       C DIDECQ   T         C 
Sbjct: 3   NECLDNNG-GCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDT-----CSQLCV 56
Query: 81  NFPGGYHCECPPGYHGDAFTTGC 103
           N  GGY C+C  G+  D  T  C
Sbjct: 57  NLEGGYKCQCEEGFQLDPHTKAC 79

>pdb|3M0C|C Chain C, The X-Ray Crystal Structure Of Pcsk9 In Complex With The Ldl Receptor Length = 791

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 21  NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT 80
           NEC   N  G + +C +    Y C C  G+       C DIDECQ   T         C 
Sbjct: 313 NECLDNNG-GCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDT-----CSQLCV 366
Query: 81  NFPGGYHCECPPGYHGDAFTTGC 103
           N  GGY C+C  G+  D  T  C
Sbjct: 367 NLEGGYKCQCEEGFQLDPHTKAC 389

>pdb|3M0C|C Chain C, The X-Ray Crystal Structure Of Pcsk9 In Complex With The Ldl Receptor Length = 791

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 79  CTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
           C +   GY C CP G+   A    C D DEC + P     LC N++G Y C C  GF+
Sbjct: 326 CNDLKIGYECLCPDGFQLVA-QRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQ 381

>pdb|3P5C|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE RECEPTOR IN AN Extended Conformation Length = 440

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 21  NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT 80
           NEC   N  G + +C +    Y C C  G+       C DIDECQ   T   C     C 
Sbjct: 41  NECLDNNG-GCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDT---CS--QLCV 94
Query: 81  NFPGGYHCECPPGYHGDAFTTGC 103
           N  GGY C+C  G+  D  T  C
Sbjct: 95  NLEGGYKCQCEEGFQLDPHTKAC 117

>pdb|3P5C|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE RECEPTOR IN AN Extended Conformation Length = 440

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 79  CTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
           C +   GY C CP G+   A    C D DEC + P     LC N++G Y C C  GF+
Sbjct: 54  CNDLKIGYECLCPDGFQLVA-QRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQ 109

>pdb|1HJ7|A Chain A, Nmr Study Of A Pair Of Ldl Receptor Ca2+ Binding Epidermal Growth Factor-Like Domains, 20 Structures Length = 80

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 21  NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT 80
           NEC   N  G + +C +    Y C C  G+       C DIDECQ   T         C 
Sbjct: 3   NECLDNNG-GCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDT-----CSQLCV 56
Query: 81  NFPGGYHCECPPGYHGDAFTTGC 103
           N  GGY C+C  G+  D  T  C
Sbjct: 57  NLEGGYKCQCEEGFQLDPHTKAC 79

>pdb|3P5B|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE RECEPTOR IN AN Extended Conformation Length = 400

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 21  NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT 80
           NEC   N  G + +C +    Y C C  G+       C DIDECQ   T   C     C 
Sbjct: 1   NECLDNNG-GCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDT---CS--QLCV 54
Query: 81  NFPGGYHCECPPGYHGDAFTTGC 103
           N  GGY C+C  G+  D  T  C
Sbjct: 55  NLEGGYKCQCEEGFQLDPHTKAC 77

>pdb|3P5B|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE RECEPTOR IN AN Extended Conformation Length = 400

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 79  CTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
           C +   GY C CP G+   A    C D DEC + P     LC N++G Y C C  GF+
Sbjct: 14  CNDLKIGYECLCPDGFQLVA-QRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQ 69

>pdb|3BPS|E Chain E, Pcsk9:egf-a Complex Length = 83

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 21  NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT 80
           NEC   N  G + +C +    Y C C  G+       C DIDECQ   T         C 
Sbjct: 6   NECLDNNG-GCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDT-----CSQLCV 59
Query: 81  NFPGGYHCECPPGYHGDAFTTGC 103
           N  GGY C+C  G+  D  T  C
Sbjct: 60  NLEGGYKCQCEEGFQLDPHTKAC 82

>pdb|2W2M|E Chain E, Wt Pcsk9-Deltac Bound To Wt Egf-A Of Ldlr Length = 107

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 14  FVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVC 73
           F   +  NEC   N  G + +C +    Y C C  G+       C DIDECQ   T    
Sbjct: 23  FQGAMGTNECLDNNG-GCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDT---- 77
Query: 74  GPGARCTNFPGGYHCECPPGYHGDAFTTGC 103
                C N  GGY C+C  G+  D  T  C
Sbjct: 78  -CSQLCVNLEGGYKCQCEEGFQLDPHTKAC 106

>pdb|3GCW|E Chain E, Pcsk9:egfa(H306y) Length = 83

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 21  NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT 80
           NEC   N  G + +C +    Y C C  G+       C DIDECQ   T         C 
Sbjct: 6   NECLDNNG-GCSYVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDT-----CSQLCV 59
Query: 81  NFPGGYHCECPPGYHGDAFTTGC 103
           N  GGY C+C  G+  D  T  C
Sbjct: 60  NLEGGYKCQCEEGFQLDPHTKAC 82

>pdb|2W2N|E Chain E, Wt Pcsk9-Deltac Bound To Egf-A H306y Mutant Of Ldlr Length = 107

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 14  FVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVC 73
           F   +  NEC   N  G + +C +    Y C C  G+       C DIDECQ   T    
Sbjct: 23  FQGAMGTNECLDNNG-GCSYVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDT---- 77
Query: 74  GPGARCTNFPGGYHCECPPGYHGDAFTTGC 103
                C N  GGY C+C  G+  D  T  C
Sbjct: 78  -CSQLCVNLEGGYKCQCEEGFQLDPHTKAC 106

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	136
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	4e-27
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	1e-25
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	3e-15
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	3e-05
2bou_A	143	EGF-like module containing mucin-like hormone rece	2e-26
2bou_A	143	EGF-like module containing mucin-like hormone rece	1e-20
2bou_A	143	EGF-like module containing mucin-like hormone rece	7e-09
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	8e-23
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	3e-14
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	7e-14
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	1e-21
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	4e-18
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	4e-07
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	2e-20
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	1e-19
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	1e-07
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	2e-19
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	2e-13
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	5e-05
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	2e-18
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	7e-13
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	4e-04
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	1e-17
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	6e-11
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	9e-05
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	3e-17
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	1e-08
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	3e-06
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	3e-16
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	4e-15
1aut_L	114	Activated protein C; serine proteinase, plasma cal	1e-15
1aut_L	114	Activated protein C; serine proteinase, plasma cal	5e-13
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	3e-14
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	3e-08
2vh0_B	134	Activated factor XA light chain; serine protease,	5e-14
2vh0_B	134	Activated factor XA light chain; serine protease,	2e-13
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	5e-13
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	7e-12
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	8e-13
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	1e-10
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	2e-12
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	2e-09
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	3e-12
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	2e-10
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	3e-09
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	9e-12
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	3e-07
3v65_B	386	Low-density lipoprotein receptor-related protein;	2e-11
3v65_B	386	Low-density lipoprotein receptor-related protein;	7e-10
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	9e-07
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	1e-05
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	2e-06
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	9e-06
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	1e-05
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	2e-04
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	6e-06
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	8e-06
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	2e-05
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	6e-05
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	4e-05
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	5e-05
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	6e-05
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	1e-04
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	3e-04
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	1e-04
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	2e-04
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	4e-04
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	9e-04
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	4e-04
3fby_A	551	COMP, cartilage oligomeric matrix protein; signatu	7e-04
1nzi_A	159	Complement C1S component; calcium, innate immunity	7e-04

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 97.8 bits (244), Expect = 4e-27
 Identities = 31/119 (26%), Positives = 40/119 (33%), Gaps = 10/119 (8%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFE-GCIDIDECQYASTHPVCGPGA 77
           D+NEC  P  C  +  C N PG+Y C C P +  NP   GC+D            C    
Sbjct: 2   DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGN-------CYLDI 53

Query: 78  RCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
           R     G   C    G      +  C    +    PC      +  +    C    GFR
Sbjct: 54  RPRGDNGDTACSNEIGVGVSKASCCCSL-GKAWGTPCEMCPAVNTSEYKILCPGGEGFR 111

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 94.0 bits (234), Expect = 1e-25
 Identities = 25/120 (20%), Positives = 38/120 (31%), Gaps = 9/120 (7%)

Query: 18  VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA 77
           VD         C ++   +   G+  CS + G   +    C  + +         C    
Sbjct: 42  VDTRSGN----CYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKA----WGTPCEMCP 93

Query: 78  RCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCG-KDALCSNVDGSYTCTCPPGFR 136
                     C    G+  +  T    D DEC   P   +   C N  GS+ C CP G+ 
Sbjct: 94  AVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYY 153

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 67.0 bits (164), Expect = 3e-15
 Identities = 22/86 (25%), Positives = 30/86 (34%), Gaps = 5/86 (5%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFE-GCIDIDECQYASTHPVCGPGA 77
            + +      C +            C    G+  NP      DIDEC      P    G 
Sbjct: 80  SLGKAWGTP-CEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDEC---QELPGLCQGG 135

Query: 78  RCTNFPGGYHCECPPGYHGDAFTTGC 103
           +C N  G + C CP GY+ +  T  C
Sbjct: 136 KCINTFGSFQCRCPTGYYLNEDTRVC 161

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 18  VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP 54
            DI+EC           C N  G++ C C  GY  N 
Sbjct: 120 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNE 156

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 95.7 bits (238), Expect = 2e-26
 Identities = 44/134 (32%), Positives = 55/134 (41%), Gaps = 22/134 (16%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGN------PFEGCIDIDECQYASTHPV 72
           D   CA    C  ++ C N      C C PG++        P E C DI+EC   S    
Sbjct: 1   DSRGCARW--CPQDSSCVN---ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVS- 54

Query: 73  CGPGARCTNFPGGYHCECPPGYHGDAFT--------TGCVDADECV--NRPCGKDALCSN 122
           CG  + C N  G Y C C PGY   +            C D DEC      C    +C N
Sbjct: 55  CGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFN 114

Query: 123 VDGSYTCTCPPGFR 136
             GSY+C C PG++
Sbjct: 115 TVGSYSCRCRPGWK 128

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 80.6 bits (199), Expect = 1e-20
 Identities = 33/103 (32%), Positives = 39/103 (37%), Gaps = 13/103 (12%)

Query: 18  VDINECAHPNA--CGVNALCQNYPGNYTCSCQPGYTGNPFEG---------CIDIDECQY 66
            DINECA  +   CG  + C N  G+Y C C PGY                C D+DEC  
Sbjct: 42  DDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDEC-- 99

Query: 67  ASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADEC 109
           +S    C     C N  G Y C C PG+              C
Sbjct: 100 SSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVC 142

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 50.2 bits (120), Expect = 7e-09
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 18  VDINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNPFE-GCIDIDECQ 65
            D++EC+   + C  + +C N  G+Y+C C+PG+              C+
Sbjct: 94  QDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVCE 143

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 85.7 bits (213), Expect = 8e-23
 Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 10/118 (8%)

Query: 19  DINECA-HPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA 77
           D++EC+   N C     C N  G++ C C  GYTG   E  ID++EC    ++P C   A
Sbjct: 4   DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCE--IDVNEC---VSNP-CQNDA 57

Query: 78  RCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
            C +  G + C C PGY G       V+ DEC + PC  +  C +    + C CP GF
Sbjct: 58  TCLDQIGEFQCICMPGYEG---VHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGF 112

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 63.8 bits (156), Expect = 3e-14
 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 7/79 (8%)

Query: 58  CIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGC-VDADECVNRPCGK 116
             D+DEC   +    C    +C N  G + C+C  GY G      C +D +ECV+ PC  
Sbjct: 2   AQDVDECSLGAN--PCEHAGKCINTLGSFECQCLQGYTGPR----CEIDVNECVSNPCQN 55

Query: 117 DALCSNVDGSYTCTCPPGF 135
           DA C +  G + C C PG+
Sbjct: 56  DATCLDQIGEFQCICMPGY 74

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 63.0 bits (154), Expect = 7e-14
 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 12/98 (12%)

Query: 18  VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA 77
           +D+NEC   N C  +A C +  G + C C PGY G   E  ++ DEC    + P C    
Sbjct: 43  IDVNECV-SNPCQNDATCLDQIGEFQCICMPGYEGVHCE--VNTDECA---SSP-CLHNG 95

Query: 78  RCTNFPGGYHCECPPGYHGDAFTTGC-VDADECVNRPC 114
           RC +    + CECP G+ G      C VD    ++   
Sbjct: 96  RCLDKINEFQCECPTGFTG----HLCQVDLHHILDAQK 129

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 81.6 bits (202), Expect = 1e-21
 Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 5/88 (5%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEG--CIDIDECQYASTHPVCGPG 76
           DI+EC           C N PG++ C C  GY         C+DIDEC      P+   G
Sbjct: 2   DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDEC---QRDPLLCRG 58

Query: 77  ARCTNFPGGYHCECPPGYHGDAFTTGCV 104
             C N  G Y CECPPG+      + C+
Sbjct: 59  GVCHNTEGSYRCECPPGHQLSPNISACI 86

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 72.7 bits (179), Expect = 4e-18
 Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 5/79 (6%)

Query: 60  DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFT-TGCVDADECVNRPCG-KD 117
           DIDEC      P      +C N PG + C+C  GY         C+D DEC   P   + 
Sbjct: 2   DIDEC---RISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRG 58

Query: 118 ALCSNVDGSYTCTCPPGFR 136
            +C N +GSY C CPPG +
Sbjct: 59  GVCHNTEGSYRCECPPGHQ 77

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 44.2 bits (105), Expect = 4e-07
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 18 VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP 54
          +DI+EC          +C N  G+Y C C PG+  +P
Sbjct: 44 MDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSP 80

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 78.4 bits (194), Expect = 2e-20
 Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 58  CIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKD 117
            +D+DEC+     P      +C N  G Y CECP GY        CVD DEC       +
Sbjct: 2   AVDMDECK----EPDVCKHGQCINTDGSYRCECPFGYILAGNE--CVDTDECSVGNPCGN 55

Query: 118 ALCSNVDGSYTCTCPPGFR 136
             C NV G + CTC  GF 
Sbjct: 56  GTCKNVIGGFECTCEEGFE 74

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 76.5 bits (189), Expect = 1e-19
 Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 18  VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA 77
           VD++EC  P+    +  C N  G+Y C C  GY       C+D DEC   +         
Sbjct: 3   VDMDECKEPD-VCKHGQCINTDGSYRCECPFGYILAGN-ECVDTDECSVGN----PCGNG 56

Query: 78  RCTNFPGGYHCECPPGYHGDAFTT 101
            C N  GG+ C C  G+      T
Sbjct: 57  TCKNVIGGFECTCEEGFEPGPMMT 80

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 45.3 bits (108), Expect = 1e-07
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 18 VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGC 58
          VD +EC+  N CG N  C+N  G + C+C+ G+   P   C
Sbjct: 42 VDTDECSVGNPCG-NGTCKNVIGGFECTCEEGFEPGPMMTC 81

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 77.4 bits (191), Expect = 2e-19
 Identities = 37/139 (26%), Positives = 51/139 (36%), Gaps = 24/139 (17%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFE-GCIDIDECQYASTHP------ 71
           DI+EC   ++  +N +C+N PG++ C C    T +P +  CI+  +     T        
Sbjct: 3   DIDECE--SSPCINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEI 60

Query: 72  -------------VCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCG-KD 117
                          G               C  GY     T  C D DEC   P   K+
Sbjct: 61  NINGATLKSQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQ-CEDIDECEVFPGVCKN 119

Query: 118 ALCSNVDGSYTCTCPPGFR 136
            LC N  GS+ C CP G  
Sbjct: 120 GLCVNTRGSFKCQCPSGMT 138

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 62.0 bits (151), Expect = 2e-13
 Identities = 21/86 (24%), Positives = 27/86 (31%), Gaps = 5/86 (5%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGAR 78
             ++C                      C  GY+      C DIDEC      P       
Sbjct: 67  LKSQCCSSLGAAWG--SPCTLCQVDPICGKGYSRIKGTQCEDIDEC---EVFPGVCKNGL 121

Query: 79  CTNFPGGYHCECPPGYHGDAFTTGCV 104
           C N  G + C+CP G   DA    C+
Sbjct: 122 CVNTRGSFKCQCPSGMTLDATGRICL 147

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 18  VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP 54
            DI+EC        N LC N  G++ C C  G T + 
Sbjct: 105 EDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDA 141

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 73.5 bits (181), Expect = 2e-18
 Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 11/106 (10%)

Query: 32  NALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECP 91
           +    +   +Y             +G +  +EC   +     G    C +   GY C CP
Sbjct: 3   HHHHHHPMSDYDIPTTENLYF---QGAMGTNECLDNN----GGCSYVCNDLKIGYECLCP 55

Query: 92  PGYHGDAFTTGCVDADEC-VNRPCGKDALCSNVDGSYTCTCPPGFR 136
            G+   A    C D DEC     C    LC N++G Y C C  GF+
Sbjct: 56  DGFQLVAQRR-CEDIDECQDPDTC--SQLCVNLEGGYKCQCEEGFQ 98

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 59.7 bits (145), Expect = 7e-13
 Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 6/77 (7%)

Query: 18 VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA 77
          +  NEC   N  G + +C +    Y C C  G+       C DIDECQ            
Sbjct: 27 MGTNECLDNN-GGCSYVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPD-----TCSQ 80

Query: 78 RCTNFPGGYHCECPPGY 94
           C N  GGY C+C  G+
Sbjct: 81 LCVNLEGGYKCQCEEGF 97

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 36.5 bits (85), Expect = 4e-04
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 18  VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP 54
            DI+EC  P+ C  + LC N  G Y C C+ G+  +P
Sbjct: 67  EDIDECQDPDTC--SQLCVNLEGGYKCQCEEGFQLDP 101

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 72.0 bits (177), Expect = 1e-17
 Identities = 29/119 (24%), Positives = 38/119 (31%), Gaps = 13/119 (10%)

Query: 19  DINECAHPNACGVNALCQNY-PGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA 77
            ++ C           CQ     +Y C C  G+   P E       C             
Sbjct: 3   PVDPCFR---ANCEYQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCN-------QTACP 52

Query: 78  RCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
              +      CECP GY  D     C D DEC N       +C N+ G++ C C P   
Sbjct: 53  ADCDPNTQASCECPEGYILDDGFI-CTDIDECEN-GGFCSGVCHNLPGTFECICGPDSA 109

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 55.1 bits (133), Expect = 6e-11
 Identities = 18/80 (22%), Positives = 25/80 (31%), Gaps = 5/80 (6%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGAR 78
           + + C             +     +C C  GY  +    C DIDEC+             
Sbjct: 38  EPHRCQMFCNQTACPADCDPNTQASCECPEGYILDDGFICTDIDECENG-----GFCSGV 92

Query: 79  CTNFPGGYHCECPPGYHGDA 98
           C N PG + C C P      
Sbjct: 93  CHNLPGTFECICGPDSALAG 112

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 38.5 bits (90), Expect = 9e-05
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 18  VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEG 57
            DI+EC +   C  + +C N PG + C C P        G
Sbjct: 78  TDIDECENGGFC--SGVCHNLPGTFECICGPDSALAGQIG 115

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 75.8 bits (186), Expect = 3e-17
 Identities = 40/138 (28%), Positives = 55/138 (39%), Gaps = 23/138 (16%)

Query: 19  DINECAHPNACGVNALCQNYP-GNYTC-SCQPGYTGNPFEGCIDIDECQYAS-THPVCGP 75
           D + C   N C   A C ++P G+++C  C  G+ GN    C D+DEC            
Sbjct: 2   DPDGCL-SNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTH-CEDLDECALVPDICFSTSK 59

Query: 76  GARCTNFPGGYHCE-CPPGYHGDAFT-----------TGCVDADECVNR--PCGKDALCS 121
             RC N   G+HC  CPP Y G+                C   + C ++   C K A C 
Sbjct: 60  VPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECI 119

Query: 122 NV----DGSYTCTCPPGF 135
            +    D  Y C C  G+
Sbjct: 120 YLGHFSDPMYKCECQTGY 137

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 51.2 bits (122), Expect = 1e-08
 Identities = 31/140 (22%), Positives = 44/140 (31%), Gaps = 26/140 (18%)

Query: 18  VDINECAHPN----ACGVNALCQNYPGNYTC-SCQPGYTGNPFEG------------CID 60
            D++ECA       +      C N    + C  C P Y GN   G            C  
Sbjct: 42  EDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEP 101

Query: 61  IDECQYASTHPVCGPGARCTNFP----GGYHCECPPGYHGDAFTTG---CVDADECVNRP 113
            + C+  + +  C   A C          Y CEC  GY GD    G    +D    +N  
Sbjct: 102 ENPCKDKTHN--CHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLNLV 159

Query: 114 CGKDALCSNVDGSYTCTCPP 133
           C  +A    +  +       
Sbjct: 160 CATNATYHCIKDNCPHLPNS 179

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 44.2 bits (104), Expect = 3e-06
 Identities = 21/123 (17%), Positives = 32/123 (26%), Gaps = 7/123 (5%)

Query: 16  VFVDINECA-HPNACGVNALCQNYP----GNYTCSCQPGYTGNPFEGCIDIDECQYASTH 70
           V    N C    + C  +A C          Y C CQ GY G+      D D   + + +
Sbjct: 98  VCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLN 157

Query: 71  PVC--GPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYT 128
            VC       C      +                  D D+  +    +   C  +     
Sbjct: 158 LVCATNATYHCIKDNCPHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQ 217

Query: 129 CTC 131
              
Sbjct: 218 ADY 220

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 67.7 bits (166), Expect = 3e-16
 Identities = 33/79 (41%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 60  DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDAL 119
           D+DEC   S  P     A C N PG + CECP GY  +  +  C D DEC    C    L
Sbjct: 2   DVDEC---SLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMC--AQL 56

Query: 120 CSNVDGSYTCTC--PPGFR 136
           C N  G YTC C    GF+
Sbjct: 57  CVNYPGGYTCYCDGKKGFK 75

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 65.0 bits (159), Expect = 4e-15
 Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFE-GCIDIDECQYASTHPVCGPGA 77
           D++EC+   +    A+C+N PG++ C C  GY  N     C DIDEC   S +  C    
Sbjct: 2   DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDEC---SENM-C--AQ 55

Query: 78  RCTNFPGGYHCEC--PPGYHGDAFTTGCVD 105
            C N+PGGY C C    G+        C  
Sbjct: 56  LCVNYPGGYTCYCDGKKGFKLAQDQKSCEV 85

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 66.7 bits (163), Expect = 1e-15
 Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 14/112 (12%)

Query: 18  VDINECAHPNA-------CGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTH 70
           VD ++C            C  +  C +  G+++C C+ G+ G   +  +    C   +  
Sbjct: 4   VDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDN-- 61

Query: 71  PVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSN 122
              G    C    G   C C PGY        C      V  PCG+      
Sbjct: 62  --GGCTHYCLEEVGWRRCSCAPGYKLGDDLLQC---HPAVKFPCGRPWKRME 108

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 60.1 bits (146), Expect = 5e-13
 Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 5/83 (6%)

Query: 58  CIDIDECQYASTH----PVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRP 113
            +D D+C           +C     C +  G + C+C  G+ G       V    C    
Sbjct: 3   HVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQR-EVSFLNCSLDN 61

Query: 114 CGKDALCSNVDGSYTCTCPPGFR 136
            G    C    G   C+C PG++
Sbjct: 62  GGCTHYCLEEVGWRRCSCAPGYK 84

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 67.2 bits (163), Expect = 3e-14
 Identities = 28/113 (24%), Positives = 36/113 (31%), Gaps = 6/113 (5%)

Query: 21  NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT 80
           NEC   N  G + +C +    Y C C  G+       C DIDEC        C     C 
Sbjct: 1   NECLDNN-GGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDEC---QDPDTCSQ--LCV 54

Query: 81  NFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPP 133
           N  GGY C+C  G+  D  T  C                   +    +     
Sbjct: 55  NLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSL 107

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 50.2 bits (119), Expect = 3e-08
 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 73  CGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCP 132
            G    C +   GY C CP G+   A    C D DEC + P     LC N++G Y C C 
Sbjct: 8   GGCSHVCNDLKIGYECLCPDGFQLVAQRR-CEDIDECQD-PDTCSQLCVNLEGGYKCQCE 65

Query: 133 PGFR 136
            GF+
Sbjct: 66  EGFQ 69

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 63.1 bits (154), Expect = 5e-14
 Identities = 21/108 (19%), Positives = 27/108 (25%), Gaps = 8/108 (7%)

Query: 29  CGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHC 88
           C                              D D+C    T P C    +C +  G Y C
Sbjct: 12  CMEETCSYEEAREVFEDSDKTNEFWN--KYKDGDQC---ETSP-CQNQGKCKDGLGEYTC 65

Query: 89  ECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
            C  G+ G            C       D  C     S  C+C  G+ 
Sbjct: 66  TCLEGFEGK--NCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYT 111

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 61.5 bits (150), Expect = 2e-13
 Identities = 24/103 (23%), Positives = 33/103 (32%), Gaps = 9/103 (8%)

Query: 18  VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA 77
            D ++C   + C     C++  G YTC+C  G+ G   E  +   +    S         
Sbjct: 40  KDGDQCE-TSPCQNQGKCKDGLGEYTCTCLEGFEGKNCE--LFTRKL--CSLDN-GDCDQ 93

Query: 78  RCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALC 120
            C        C C  GY        C         PCGK  L 
Sbjct: 94  FCHEEQNSVVCSCARGYTLADNGKAC---IPTGPYPCGKQTLE 133

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 62.1 bits (151), Expect = 5e-13
 Identities = 14/118 (11%), Positives = 23/118 (19%), Gaps = 8/118 (6%)

Query: 18  VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA 77
           +   +    +    +  C     +  CSC  GYT                     CG   
Sbjct: 78  LFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNG--KACIPTGPYP----CGKQT 131

Query: 78  RCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
                          G   D+ T      D     P        + + +         
Sbjct: 132 LERRKRSVAQATSSSGEAPDSIT--WKPYDAADLDPTENPFDLLDFNQTQPERGDNNL 187

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 59.0 bits (143), Expect = 7e-12
 Identities = 21/108 (19%), Positives = 27/108 (25%), Gaps = 8/108 (7%)

Query: 29  CGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHC 88
           C                              D D+C    T P C    +C +  G Y C
Sbjct: 12  CMEETCSYEEAREVFEDSDKTNEFWN--KYKDGDQC---ETSP-CQNQGKCKDGLGEYTC 65

Query: 89  ECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
            C  G+ G            C       D  C     S  C+C  G+ 
Sbjct: 66  TCLEGFEGK--NCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYT 111

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 60.4 bits (147), Expect = 8e-13
 Identities = 26/105 (24%), Positives = 37/105 (35%), Gaps = 10/105 (9%)

Query: 18  VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA 77
           VD ++C  PN C    LC++   +Y C CQ G+ G   E  +D                 
Sbjct: 46  VDGDQCE-PNPCLNGGLCKDDINSYECWCQVGFEGKNCE--LDATCN----IKNGRCKQF 98

Query: 78  RCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSN 122
             T       C C  GY        C      V  PCG+ ++  +
Sbjct: 99  CKTGADSKVLCSCTTGYRLAPDQKSC---KPAVPFPCGRVSVSHS 140

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 54.7 bits (132), Expect = 1e-10
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 17/109 (15%)

Query: 35  CQNYPGNYTCSCQ------PGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHC 88
           C     ++  + +             ++  +D D+C     +P C  G  C +    Y C
Sbjct: 18  CIEEKCSFEEAREVFENTEKTNEF--WKQYVDGDQC---EPNP-CLNGGLCKDDINSYEC 71

Query: 89  ECPPGYHGDAFTTGC-VDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
            C  G+ G      C +DA   +     K    +  D    C+C  G+R
Sbjct: 72  WCQVGFEGKN----CELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYR 116

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 59.3 bits (144), Expect = 2e-12
 Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 8/104 (7%)

Query: 18  VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA 77
            D ++CA  + C     C++   +Y C C P + G   E     D+          G   
Sbjct: 45  SDGDQCA-SSPCQNGGSCKDQLQSYICFCLPAFEGRNCE--THKDDQLICVNEN-GGCEQ 100

Query: 78  RCTNFPG-GYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALC 120
            C++  G    C C  GY   A    C      V  PCGK  + 
Sbjct: 101 YCSDHTGTKRSCRCHEGYSLLADGVSC---TPTVEYPCGKIPIL 141

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 51.2 bits (123), Expect = 2e-09
 Identities = 24/107 (22%), Positives = 33/107 (30%), Gaps = 6/107 (5%)

Query: 31  VNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCEC 90
               C                        D D+C   ++ P C  G  C +    Y C C
Sbjct: 18  KEEQCSFEEAREIFKDAERTKLFWIS-YSDGDQC---ASSP-CQNGGSCKDQLQSYICFC 72

Query: 91  PPGYHGDAFTTGCVDADECVNRPCGKDALCSN-VDGSYTCTCPPGFR 136
            P + G    T   D   CVN   G +  CS+      +C C  G+ 
Sbjct: 73  LPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYS 119

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 60.0 bits (144), Expect = 3e-12
 Identities = 22/115 (19%), Positives = 32/115 (27%), Gaps = 6/115 (5%)

Query: 26  PNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFP-- 83
            +    N        ++ C C  G        C + +EC   +    CG   +C   P  
Sbjct: 9   VDTICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDP 68

Query: 84  ---GGYHCECPPGYHGDAFTTGCVDADECVNRPCGK-DALCSNVDGSYTCTCPPG 134
                Y C C  GY     T              G+      +   S  C+C  G
Sbjct: 69  AQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIG 123

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 54.7 bits (130), Expect = 2e-10
 Identities = 23/121 (19%), Positives = 32/121 (26%), Gaps = 5/121 (4%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGAR 78
            +          +          Y C C  GYT       +D   CQY +          
Sbjct: 51  TLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLD--VCQYXNCGESGECIVE 108

Query: 79  CTNFPGGYHCECPPGYHGDAFTTGC---VDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
             +      C C  G   +              C       + +C NV+G Y C C  GF
Sbjct: 109 YLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGF 168

Query: 136 R 136
            
Sbjct: 169 T 169

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 52.0 bits (123), Expect = 3e-09
 Identities = 16/93 (17%), Positives = 25/93 (26%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGAR 78
                    +        +   +  CSC  G   NP +        + A           
Sbjct: 93  VCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEV 152

Query: 79  CTNFPGGYHCECPPGYHGDAFTTGCVDADECVN 111
           C N  G Y C+C  G+  D     C+      +
Sbjct: 153 CXNVEGVYXCQCMEGFTFDXEXNVCLGPHHHHH 185

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 57.4 bits (139), Expect = 9e-12
 Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 23/131 (17%)

Query: 22  ECAHPNACGVNALCQN--YPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPV------- 72
            C  PN C    +C      G+++C C  G+T         ++                 
Sbjct: 2   ICD-PNPCENGGICLPGLADGSFSCECPDGFTDPNCS--SVVEVASDEEEPTSAGPCTPN 58

Query: 73  -CGPGARCTNFPG-------GYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVD 124
            C  G  C            GY C+CP G++G        + +EC   PC    +C+++ 
Sbjct: 59  PCHNGGTCEISEAYRGDTFIGYVCKCPRGFNG---IHCQHNINECEVEPCKNGGICTDLV 115

Query: 125 GSYTCTCPPGF 135
            +Y+C CP  F
Sbjct: 116 ANYSCECPGEF 126

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 45.9 bits (109), Expect = 3e-07
 Identities = 25/97 (25%), Positives = 34/97 (35%), Gaps = 14/97 (14%)

Query: 8   IINISQFVVFVDINECAHPNACGVNALCQ-------NYPGNYTCSCQPGYTGNPFEGCID 60
           +   S          C  PN C     C+       +    Y C C  G+ G   +   +
Sbjct: 40  VEVASDEEEPTSAGPCT-PNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQ--HN 96

Query: 61  IDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD 97
           I+EC      P C  G  CT+    Y CECP  + G 
Sbjct: 97  INEC---EVEP-CKNGGICTDLVANYSCECPGEFMGR 129

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 59.0 bits (142), Expect = 2e-11
 Identities = 25/98 (25%), Positives = 30/98 (30%), Gaps = 7/98 (7%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEG-CIDIDECQYASTHPVCGPGA 77
               C   N  G    CQ   G   C+C  GY        C D++EC   +    C  G 
Sbjct: 2   GEENCNVNN-GGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNEC---AEEGYCSQG- 56

Query: 78  RCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCG 115
            CTN  G + C C  GY        C            
Sbjct: 57  -CTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFA 93

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 54.4 bits (130), Expect = 7e-10
 Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 5/77 (6%)

Query: 60  DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDAL 119
             + C   +     G   +C    G   C C  GY        C D +EC          
Sbjct: 2   GEENCNVNN----GGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEG-YCSQG 56

Query: 120 CSNVDGSYTCTCPPGFR 136
           C+N +G++ C C  G+ 
Sbjct: 57  CTNSEGAFQCWCEAGYE 73

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 45.5 bits (108), Expect = 9e-07
 Identities = 25/99 (25%), Positives = 31/99 (31%), Gaps = 9/99 (9%)

Query: 18  VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA 77
              + C     C  N  CQ+    YTC+C PGY G+  E  +  +EC         G   
Sbjct: 3   KGGSPCI-SQPCLHNGSCQDSIWGYTCTCSPGYEGSNCE--LAKNEC---HPERTDGCQH 56

Query: 78  RCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGK 116
            C      Y C C  GY                   CG 
Sbjct: 57  FCLPGQESYTCSCAQGY---RLGEDHKQCVPHDQCACGV 92

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 42.0 bits (99), Expect = 1e-05
 Identities = 22/78 (28%), Positives = 27/78 (34%), Gaps = 6/78 (7%)

Query: 59  IDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDA 118
                C    + P C     C +   GY C C PGY G          +    R  G   
Sbjct: 3   KGGSPC---ISQP-CLHNGSCQDSIWGYTCTCSPGYEG--SNCELAKNECHPERTDGCQH 56

Query: 119 LCSNVDGSYTCTCPPGFR 136
            C     SYTC+C  G+R
Sbjct: 57  FCLPGQESYTCSCAQGYR 74

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 44.5 bits (105), Expect = 2e-06
 Identities = 23/115 (20%), Positives = 28/115 (24%), Gaps = 21/115 (18%)

Query: 21  NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT 80
            +           +  +       + Q                CQ A     C  G  C 
Sbjct: 112 KQDGVAAFEVDVIVMNSEGNTILKTPQNAIFF---------KTCQQAECPGGCRNGGFCN 162

Query: 81  NFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
                  CECP G+HG                 C    LC        C CPPGF
Sbjct: 163 E---RRICECPDGFHGPHCEK------ALCTPRCMNGGLCVT---PGFCICPPGF 205

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 42.5 bits (100), Expect = 9e-06
 Identities = 27/115 (23%), Positives = 34/115 (29%), Gaps = 24/115 (20%)

Query: 21  NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT 80
            +      C    LC        C C PG+ G           C  A+    C  G  C 
Sbjct: 179 EKALCTPRCMNGGLCVT---PGFCICPPGFYG---------VNCDKANCSTTCFNGGTCF 226

Query: 81  NFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
                  C CPPG  G+     C +  +C   PC     C        C C  G+
Sbjct: 227 Y---PGKCICPPGLEGEQ----C-EISKCPQ-PCRNGGKCIG---KSKCKCSKGY 269

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 42.1 bits (99), Expect = 1e-05
 Identities = 24/115 (20%), Positives = 34/115 (29%), Gaps = 24/115 (20%)

Query: 21  NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT 80
           ++      C     C        C C PG  G         ++C+ +     C  G +C 
Sbjct: 211 DKANCSTTCFNGGTCFY---PGKCICPPGLEG---------EQCEISKCPQPCRNGGKCI 258

Query: 81  NFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
                  C+C  GY GD  +       E     CG    C        C C  G+
Sbjct: 259 G---KSKCKCSKGYQGDLCSK---PVCEP---GCGAHGTCHE---PNKCQCQEGW 301

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 38.7 bits (90), Expect = 2e-04
 Identities = 21/96 (21%), Positives = 28/96 (29%), Gaps = 20/96 (20%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGAR 78
           +I++C  P  C     C        C C  GY G         D C      P CG    
Sbjct: 243 EISKCPQP--CRNGGKCIG---KSKCKCSKGYQG---------DLCSKPVCEPGCGAHGT 288

Query: 79  CTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPC 114
           C        C+C  G+HG          +  +    
Sbjct: 289 CHE---PNKCQCQEGWHGRHCNK---RYEASLIGTK 318

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A Length = 285

 Score = 43.2 bits (101), Expect = 6e-06
 Identities = 12/72 (16%), Positives = 20/72 (27%), Gaps = 2/72 (2%)

Query: 60  DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDAL 119
               C  A+    C   A C ++  G+ C C   Y G+        + + VN        
Sbjct: 4   AQQTC--ANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVAEGSPQRVNGKVKGRIF 61

Query: 120 CSNVDGSYTCTC 131
             +         
Sbjct: 62  VGSSQVPVVFEN 73

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A Length = 285

 Score = 42.8 bits (100), Expect = 8e-06
 Identities = 17/120 (14%), Positives = 30/120 (25%), Gaps = 4/120 (3%)

Query: 18  VDINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPG 76
           +    CA+  + C V+A C++Y   + C C   YTGN  + C+     Q  +        
Sbjct: 3   LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQ-CVAEGSPQRVNGKVKGRIF 61

Query: 77  ARCTNFPGGYHCECPPGYHGDAFTTGCVDADEC--VNRPCGKDALCSNVDGSYTCTCPPG 134
              +  P  +       Y                                  +       
Sbjct: 62  VGSSQVPVVFENTDLHSYVVMNHGRSYTAISTIPETVGYSLLPLAPIGGIIGWMFAVEQD 121

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A Length = 91

 Score = 39.8 bits (93), Expect = 2e-05
 Identities = 12/54 (22%), Positives = 14/54 (25%), Gaps = 6/54 (11%)

Query: 84  GGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNV--DGSYTCTCPPGF 135
              +C C  G          V    C    C     C        + C CP GF
Sbjct: 30  RVEYCWCNSGRAQ----CHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGF 79

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A Length = 91

 Score = 38.6 bits (90), Expect = 6e-05
 Identities = 13/65 (20%), Positives = 19/65 (29%), Gaps = 9/65 (13%)

Query: 35 CQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTN--FPGGYHCECPP 92
                   C C  G         + +  C   S    C  G  C    +   + C+CP 
Sbjct: 25 VLRSNRVEYCWCNSGRAQC---HSVPVKSC---SEPR-CFNGGTCQQALYFSDFVCQCPE 77

Query: 93 GYHGD 97
          G+ G 
Sbjct: 78 GFAGK 82

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Length = 53

 Score = 37.8 bits (88), Expect = 4e-05
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 18 VDINECAHPNACGVNA-------LCQNYPGNYTCSCQPGYT 51
          VD++ECA  +  G          LC NY G Y CSC+PGY 
Sbjct: 2  VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYE 42

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Length = 53

 Score = 37.8 bits (88), Expect = 5e-05
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%)

Query: 59 IDIDECQYASTHPVCGPGA----RCTNFPGGYHCECPPGYH 95
          +D+DEC   S      P       C N+ GGY C C PGY 
Sbjct: 2  VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYE 42

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Length = 1245

 Score = 40.6 bits (94), Expect = 6e-05
 Identities = 20/90 (22%), Positives = 26/90 (28%), Gaps = 18/90 (20%)

Query: 51  TGNPFEGCI---DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDAD 107
              PF+G I    +         PV     +  + P       P           C   +
Sbjct: 146 EREPFKGWIRDVRVQSSLA---LPVDSGEVKLDDEPPNSGGGSP-----------CEAGE 191

Query: 108 ECVNRPCGKDALCSNVDGSYTCTCP-PGFR 136
           E     C    +CS VD    C C   GFR
Sbjct: 192 EGEGGVCLNGGVCSVVDDQAVCDCSRTGFR 221

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 25/97 (25%), Positives = 33/97 (34%), Gaps = 18/97 (18%)

Query: 41  NYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFT 100
              C CQ G+ G           C     HP C     C      + C C   + G    
Sbjct: 82  PGDCRCQYGWQG---------LYCDKCIPHPGCV-HGICNE---PWQCLCETNWGGQLCD 128

Query: 101 TGCVDADECV-NRPCGKDALCSNVD-GSYTCTCPPGF 135
               D + C  ++PC     CSN     Y C+CP G+
Sbjct: 129 K---DLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGY 162

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 10/78 (12%)

Query: 21  NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT 80
           ++C  P+   V+ +C      + C C+  + G   +   D++ C    TH  C  G  C+
Sbjct: 97  DKCI-PHPGCVHGICNE---PWQCLCETNWGGQLCD--KDLNYC---GTHQPCLNGGTCS 147

Query: 81  N-FPGGYHCECPPGYHGD 97
           N  P  Y C CP GY G 
Sbjct: 148 NTGPDKYQCSCPEGYSGP 165

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score = 39.1 bits (90), Expect = 1e-04
 Identities = 19/112 (16%), Positives = 30/112 (26%), Gaps = 2/112 (1%)

Query: 20  INECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARC 79
           +NECA    C  +  C N  G + C C+ GY   P          +            + 
Sbjct: 1   VNECAEEGYC--SQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQV 58

Query: 80  TNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTC 131
                 Y        +  A            +       L +N++GS     
Sbjct: 59  LPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 110

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Length = 39

 Score = 35.5 bits (83), Expect = 2e-04
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 18 VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGN 53
          VD ++C   N C     C++   +Y C C  G+ G 
Sbjct: 1  VDGDQCE-SNPCLNGGSCKDDINSYECWCPFGFEGK 35

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Length = 39

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 104 VDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
           VD D+C + PC     C +   SY C CP GF
Sbjct: 1   VDGDQCESNPCLNGGSCKDDINSYECWCPFGF 32

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Length = 39

 Score = 34.0 bits (79), Expect = 9e-04
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 59 IDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD 97
          +D D+C    ++P C  G  C +    Y C CP G+ G 
Sbjct: 1  VDGDQC---ESNP-CLNGGSCKDDINSYECWCPFGFEGK 35

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426

 Score = 37.9 bits (87), Expect = 4e-04
 Identities = 21/117 (17%), Positives = 29/117 (24%), Gaps = 15/117 (12%)

Query: 19  DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGAR 78
           DI             +C       TC C+   TG       D  +C+         PG+ 
Sbjct: 290 DIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTG------PDCGKCKKNYQGRPWSPGS- 342

Query: 79  CTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
               P G    C P            +   C N              +  C CP  +
Sbjct: 343 YLPIPKGAANACIPSISSIGTNVCDNELLHCQN--------GGTCHNNVRCLCPAAY 391

>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens} Length = 551

 Score = 37.2 bits (86), Expect = 7e-04
 Identities = 23/91 (25%), Positives = 26/91 (28%), Gaps = 11/91 (12%)

Query: 48  PGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNF-PGGYHCECPPGYHGDAFTT----- 101
           PG   +P         C   S    C   A C     G   C C  G+ G+         
Sbjct: 5   PGVPTSPVWWNSAQRFCPDGSPSE-CHEHADCVLERDGSRSCVCAVGWAGNGILCGRDTD 63

Query: 102 --GCVDA-DECVNRPCGKDALCSNVDGSYTC 129
             G  D    C  R C KD  C  V  S   
Sbjct: 64  LDGFPDEKLRCPERQCRKDN-CVTVPNSGQE 93

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 159

 Score = 36.7 bits (85), Expect = 7e-04
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 11  ISQFVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYT 51
            + + V  DINEC        +  C N+ G Y CSC P Y 
Sbjct: 108 FAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYF 148

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	136
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.86
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.76
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.73
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.73
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.72
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.67
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.67
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.63
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.55
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.52
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.52
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.45
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.44
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.41
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.36
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.34
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.34
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.3
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.3
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.29
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.29
2vh0_B	134	Activated factor XA light chain; serine protease,	99.27
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.26
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.2
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.19
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.17
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.16
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.15
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.05
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	99.05
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.01
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.98
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.97
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.94
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.93
2vh0_B	134	Activated factor XA light chain; serine protease,	98.93
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.91
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.83
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.81
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.75
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.74
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.67
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.67
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.65
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.58
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.53
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	98.51
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.49
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.45
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.44
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.43
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.4
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.39
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.2
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.18
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	98.17
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	98.15
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.14
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	98.08
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	98.07
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	98.04
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	98.03
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.01
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.01
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.01
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	97.99
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.98
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	97.96
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	97.96
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	97.93
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.84
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.84
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.82
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	97.8
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.74
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	97.58
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	97.52
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	97.51
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.48
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	97.33
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	97.32
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.31
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	97.22
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.19
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	97.19
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	97.08
2wph_E	59	Coagulation factor IXA light chain; serine proteas	97.07
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	97.03
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.03
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	97.03
1ob1_C	99	Major merozoite surface protein; immune system, im	96.97
2wph_E	59	Coagulation factor IXA light chain; serine proteas	96.82
1szb_A	170	Mannose binding lectin-associated serine protease-	96.82
1nzi_A	159	Complement C1S component; calcium, innate immunity	96.77
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.77
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.74
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	96.67
1ob1_C	99	Major merozoite surface protein; immune system, im	96.66
1szb_A	170	Mannose binding lectin-associated serine protease-	96.56
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	96.46
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	96.37
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	96.34
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	95.95
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	95.95
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	95.91
1nzi_A	159	Complement C1S component; calcium, innate immunity	95.53
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	95.47
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	95.42
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	94.98
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	94.68
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	93.8
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	93.67
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	93.16
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	92.99
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	92.92
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	92.78
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	92.71
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	92.58
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	91.78
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	91.57
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	91.42
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	90.96
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	90.66
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	90.65
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	90.03
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	89.64
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	89.54
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	89.21
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	89.16
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	88.9
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	88.88
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	88.55
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	87.33
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	87.28
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	86.83
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	85.99
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	85.97
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	85.86
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	84.21
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	83.59
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	82.15

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.86  E-value=2.1e-20  Score=105.47  Aligned_cols=112  Identities=37%  Similarity=0.880  Sum_probs=94.2

Q ss_pred             eeeeCCCCCC-CCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCc
Q psy2856          16 VFVDINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGY   94 (136)
Q Consensus        16 ~c~~~~~c~~-~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~   94 (136)
                      +|.|+|+|.. .++|.+++.|+++.++|.|.|.+||.+..+.  .++++|...+    |.....|+...+.|.|.|.+||
T Consensus         1 Sc~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~--~~~~~C~~~~----C~~~~~C~~~~g~~~C~C~~G~   74 (135)
T 2vj3_A            1 SAQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCE--IDVNECVSNP----CQNDATCLDQIGEFQCICMPGY   74 (135)
T ss_dssp             --CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSC--EECCTTTTCC----CCSSCEEEECSSCEEEECCTTE
T ss_pred             CCcccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCccc--ccCccCCCCC----CCCCCEEeCCCCCceeeCCCCC
Confidence            3679999984 4689999999999999999999999987543  4677887544    8888899999999999999999


Q ss_pred             eeCCCCcceeeCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856          95 HGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        95 ~~~~~~~~~~~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      .+....   .++++|....|...+.|++..++|.|.|++||.
T Consensus        75 ~G~~C~---~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~  113 (135)
T 2vj3_A           75 EGVHCE---VNTDECASSPCLHNGRCLDKINEFQCECPTGFT  113 (135)
T ss_dssp             ESSSSC---EECCTTTTCCSTTTCEEEECSSCEEEECCTTEE
T ss_pred             cCCcce---ecCCcccCCCcCCCCEeECCCCCeEEECCCCCc
Confidence            976543   378899888898889999999999999999983

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.76  E-value=1.5e-17  Score=94.77  Aligned_cols=108  Identities=28%  Similarity=0.776  Sum_probs=82.2

Q ss_pred             CCCCCCCCCCCCCeeeeCC--CCeEeeCCCCCccCCCCC----------cccCCcccCCCCCCCCCCCCeee-------e
Q psy2856          21 NECAHPNACGVNALCQNYP--GNYTCSCQPGYTGNPFEG----------CIDIDECQYASTHPVCGPGARCT-------N   81 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~~~--g~~~C~c~~g~~~~~~~~----------c~~~~~c~~~~~~~~c~~~~~c~-------~   81 (136)
                      |+|.. ++|.+++.|++..  ++|.|.|.+||.+..+..          |..+++|...+    |.+...|+       +
T Consensus         1 d~C~~-~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~----C~~~g~C~~~~~~~~~   75 (143)
T 4d90_A            1 DICDP-NPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNP----CHNGGTCEISEAYRGD   75 (143)
T ss_dssp             --CCS-CCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCC----CCTTCEEEECCCEETT
T ss_pred             CcCCC-CcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCC----CCCCCEecCCCccccC
Confidence            46764 7899999999876  689999999999875421          12345565433    88888998       4


Q ss_pred             cCCCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856          82 FPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        82 ~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ..+.|.|.|..||.+..+.   .++++|....|..++.|+++.++|.|.|++||.
T Consensus        76 ~~~~~~C~C~~G~~G~~C~---~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~  127 (143)
T 4d90_A           76 TFIGYVCKCPRGFNGIHCQ---HNINECEVEPCKNGGICTDLVANYSCECPGEFM  127 (143)
T ss_dssp             EECCEEEECCTTEESTTSC---EECCTTTTCCSCTTCEEEEETTEEEEECCTTCB
T ss_pred             CCCCeEeECcCCCcCCCcc---cCCCcCCCCCCCCCCEeECCCCCeEeECCCCCc
Confidence            5578999999999876532   289999988899999999999999999999984

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.73  E-value=3.7e-17  Score=111.15  Aligned_cols=115  Identities=34%  Similarity=0.877  Sum_probs=93.5

Q ss_pred             eeCCCCCCCCCCCCCCeeeeCCC-CeEe-eCCCCCccCCCCCcccCCcccCCCCCCCCCCCC---eeeecCCCeeee-CC
Q psy2856          18 VDINECAHPNACGVNALCQNYPG-NYTC-SCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA---RCTNFPGGYHCE-CP   91 (136)
Q Consensus        18 ~~~~~c~~~~~~~~~~~C~~~~g-~~~C-~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~---~c~~~~~~~~c~-c~   91 (136)
                      .++++|. .++|.+++.|+++.+ +|.| .|++||.+.. ..|..+++|...+.  .|....   .|++..++|.|. |.
T Consensus         1 ~DIDeC~-~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg-~~CeDiDEC~~~p~--~C~~gg~~~~CvNt~gsY~C~~C~   76 (634)
T 1yo8_A            1 ADPDGCL-SNPCFPGAQCSSFPDGSWSCGFCPVGFLGNG-THCEDLDECALVPD--ICFSTSKVPRCVNTQPGFHCLPCP   76 (634)
T ss_dssp             ---CGGG-GCCSCTTCCEEECTTSCEEECCCCTTBCSCS-SSCCBCCTTTTSCC--CSCCCSSSCCEEECSSSEEECCCC
T ss_pred             CcccccC-CCCCCCCCEEecCCCCCeECCcCCCccCCCC-CCccccccccCCCC--cccCCccccceeeccCceecccCC
Confidence            3688997 489999999999985 5999 9999999854 35888999975432  377776   899999999998 99


Q ss_pred             CCceeCCCC-----------cceeeCCCCCCC--CCCCCCeeeecC----CCeeEeCCCCCC
Q psy2856          92 PGYHGDAFT-----------TGCVDADECVNR--PCGKDALCSNVD----GSYTCTCPPGFR  136 (136)
Q Consensus        92 ~g~~~~~~~-----------~~~~~~~~c~~~--~~~~~~~c~~~~----g~~~c~C~~g~~  136 (136)
                      +||.+....           ..|.++++|...  .|...+.|+++.    ++|.|.|++||.
T Consensus        77 ~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~  138 (634)
T 1yo8_A           77 PRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYA  138 (634)
T ss_dssp             TTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEE
T ss_pred             CCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCcc
Confidence            999987643           348899999864  788889999998    999999999983

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.73  E-value=7.2e-18  Score=99.95  Aligned_cols=115  Identities=32%  Similarity=0.735  Sum_probs=92.8

Q ss_pred             eeeeeCCCCCC---CCCCCCCCeeeeCC-----CCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeee----ec
Q psy2856          15 VVFVDINECAH---PNACGVNALCQNYP-----GNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT----NF   82 (136)
Q Consensus        15 ~~c~~~~~c~~---~~~~~~~~~C~~~~-----g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~----~~   82 (136)
                      ..|.++++|..   ..+|.+.+.|+++.     ++|.|.|.+||.+... .|. +++|...+    |...+.|+    ..
T Consensus        39 ~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~-~C~-~d~C~~~~----C~~~g~C~~~~~~~  112 (186)
T 1z1y_A           39 NTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXED-TCV-LDVCQYXN----CGESGECIVEYLSE  112 (186)
T ss_dssp             TEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETT-EEE-EGGGTTCC----CCTTEEEEEEEETT
T ss_pred             CccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCC-CCC-CCcCcCCC----CCCCCEEeeCCcCC
Confidence            47999999983   36798889999999     8999999999998754 243 67787544    87778898    66


Q ss_pred             CCCeeeeCCCCceeCC-CCcceeeC--CCCCCCCC-CCCCeeeecCCCeeEeCCCCCC
Q psy2856          83 PGGYHCECPPGYHGDA-FTTGCVDA--DECVNRPC-GKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        83 ~~~~~c~c~~g~~~~~-~~~~~~~~--~~c~~~~~-~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      .++|.|.|..||.+.. ....|.++  ++|.. .| ...+.|+++.++|.|.|++||.
T Consensus       113 ~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~-~C~~~~~~C~n~~g~y~C~C~~G~~  169 (186)
T 1z1y_A          113 IQSAGCSCAIGXVPNPEDEXXCTXTGETACQL-XCNTDNEVCXNVEGVYXCQCMEGFT  169 (186)
T ss_dssp             EEEEEEEECTEEEEETTTTTEEEEEECCCCCC-CCCTTTEEEEEETTEEEEEECTTCE
T ss_pred             CCCceEECCCCCcccCCCCCcceEcCCCcccc-cccccCcceecCCCCeeeECCCCCc
Confidence            6789999999999843 22347665  78874 78 7789999999999999999983

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.72  E-value=4.2e-17  Score=92.84  Aligned_cols=106  Identities=38%  Similarity=0.893  Sum_probs=85.3

Q ss_pred             CCCCCCCeeeeCCCCeEeeCCCCCccCC------CCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCC-
Q psy2856          27 NACGVNALCQNYPGNYTCSCQPGYTGNP------FEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAF-   99 (136)
Q Consensus        27 ~~~~~~~~C~~~~g~~~C~c~~g~~~~~------~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~-   99 (136)
                      ++|.+++.|++.   |.|.|.+||.+..      ...|.++++|..... .+|.....|++..++|.|.|..||.+... 
T Consensus         7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~-~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~   82 (143)
T 2bou_A            7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDINECATLSK-VSCGKFSDCWNTEGSYDCVCSPGYEPVSGA   82 (143)
T ss_dssp             TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEECCGGGC-----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred             CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCccccccCCCC-CCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence            578888999874   8999999999842      246788899976421 13777789999999999999999998753 


Q ss_pred             -------CcceeeCCCCCC--CCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         100 -------TTGCVDADECVN--RPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       100 -------~~~~~~~~~c~~--~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                             ...|.+++||..  ..|...+.|+++.++|.|.|++||.
T Consensus        83 ~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~  128 (143)
T 2bou_A           83 KTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWK  128 (143)
T ss_dssp             SCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSC
T ss_pred             cccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcc
Confidence                   235889999985  5788889999999999999999984

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.67  E-value=2e-17  Score=96.00  Aligned_cols=115  Identities=35%  Similarity=0.784  Sum_probs=76.9

Q ss_pred             eeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCcccCCc--ccCCCCCCCC--CCCCeeeecCC----Ceee
Q psy2856          18 VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCIDIDE--CQYASTHPVC--GPGARCTNFPG----GYHC   88 (136)
Q Consensus        18 ~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~~~--c~~~~~~~~c--~~~~~c~~~~~----~~~c   88 (136)
                      .|||+|..+++|. .+.|+++.++|.|.|++||.+... ..|.++++  |.....  .+  .....|++..+    .|.|
T Consensus         1 ~dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~--~c~~~~~~~C~~~~~~~~~~~~C   77 (162)
T 1uzk_A            1 TDVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIR--PRGDNGDTACSNEIGVGVSKASC   77 (162)
T ss_dssp             CCCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC------------CEEEEEEEECHHHH
T ss_pred             CccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCc--ccCCCCCCcccCCcCCcccCcee
Confidence            3789998557886 689999999999999999986532 45666655  643210  01  12345554433    3445


Q ss_pred             eCCC---------------------------CceeCCCCcceeeCCCCCCC--CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856          89 ECPP---------------------------GYHGDAFTTGCVDADECVNR--PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        89 ~c~~---------------------------g~~~~~~~~~~~~~~~c~~~--~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      .|..                           ||.+......+.+|+||...  .|.+ +.|+++.++|.|.|++||.
T Consensus        78 ~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~  153 (162)
T 1uzk_A           78 CCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYY  153 (162)
T ss_dssp             HTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCC
T ss_pred             eCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCcc
Confidence            4544                           55554433457899999854  4764 6999999999999999984

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.67  E-value=3.1e-17  Score=90.35  Aligned_cols=106  Identities=32%  Similarity=0.767  Sum_probs=79.3

Q ss_pred             eeCCCCCCCCCCCCCCeeeeC-CCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCcee
Q psy2856          18 VDINECAHPNACGVNALCQNY-PGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHG   96 (136)
Q Consensus        18 ~~~~~c~~~~~~~~~~~C~~~-~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~   96 (136)
                      .|+|+|. .++|.  ..|+++ .++|.|.|.+||.+...    ++++|...-...+|.  ..|.. .+.|.|.|..||.+
T Consensus         2 ~dideC~-~~pC~--~~C~~~~~g~y~C~C~~Gy~g~~~----~~~~C~~~C~~~~C~--~~C~~-~~~y~C~C~~Gy~~   71 (118)
T 1dx5_I            2 EPVDPCF-RANCE--YQCQPLDQTSYLCVCAEGFAPIPH----EPHRCQMFCNQTACP--ADCDP-NTQASCECPEGYIL   71 (118)
T ss_dssp             CCCCGGG-GCCCS--SEEEECSSSCEEEECCTTEEEETT----EEEEEEECCCSSEEE--CEECT-TSTTCEECCTTEEE
T ss_pred             CccccCC-CCCCC--CCCCCCCCCCEEeECCCCccccCC----CCCccccccCCCCCC--CcccC-CCCeEeECCCCccC
Confidence            4789996 47886  399999 89999999999998742    222332200000143  46766 57899999999997


Q ss_pred             CCCCcceeeCCCCCC-CCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856          97 DAFTTGCVDADECVN-RPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        97 ~~~~~~~~~~~~c~~-~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      .. ...|.+++||.. ..|  .+.|+++.++|.|.|++||.
T Consensus        72 ~~-g~~C~dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~  109 (118)
T 1dx5_I           72 DD-GFICTDIDECENGGFC--SGVCHNLPGTFECICGPDSA  109 (118)
T ss_dssp             ET-TTEEEECCHHHHCSSC--SSEEEECSSSEEEEECSSSS
T ss_pred             CC-CCccccccccCCCCCC--cCeEEeCCCCEEEECCCCCc
Confidence            64 456889999987 567  68999999999999999984

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.63  E-value=1.3e-16  Score=94.54  Aligned_cols=107  Identities=25%  Similarity=0.577  Sum_probs=86.0

Q ss_pred             CCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecC-----CCeeeeCCCCceeCCCC
Q psy2856          26 PNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFP-----GGYHCECPPGYHGDAFT  100 (136)
Q Consensus        26 ~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~-----~~~~c~c~~g~~~~~~~  100 (136)
                      +++|.+ +.|+++.++|.|.|.+||.+.....|.++++|.......+|.....|++..     ++|.|.|.+||.+... 
T Consensus        10 ~~pC~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~-   87 (186)
T 1z1y_A           10 DTICXN-GQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXED-   87 (186)
T ss_dssp             TCCCBT-EEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETT-
T ss_pred             CCCCCC-CEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCC-
Confidence            468875 499999999999999999986444678888887421011387778999888     8999999999998764 


Q ss_pred             cceeeCCCCCCCCCCCCCeee----ecCCCeeEeCCCCCC
Q psy2856         101 TGCVDADECVNRPCGKDALCS----NVDGSYTCTCPPGFR  136 (136)
Q Consensus       101 ~~~~~~~~c~~~~~~~~~~c~----~~~g~~~c~C~~g~~  136 (136)
                       .|. +++|....|...+.|+    ++.++|.|.|++||.
T Consensus        88 -~C~-~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~  125 (186)
T 1z1y_A           88 -TCV-LDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXV  125 (186)
T ss_dssp             -EEE-EGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEE
T ss_pred             -CCC-CCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCc
Confidence             244 7899888888889998    788899999999983

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.55  E-value=2.4e-16  Score=90.11  Aligned_cols=113  Identities=33%  Similarity=0.708  Sum_probs=74.2

Q ss_pred             eeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCcccCC-----------cccCCCCCCCCCCCCeeeecCC-
Q psy2856          18 VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCIDID-----------ECQYASTHPVCGPGARCTNFPG-   84 (136)
Q Consensus        18 ~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~~-----------~c~~~~~~~~c~~~~~c~~~~~-   84 (136)
                      .|+|+|.. ++|.+ +.|+++.++|.|.|++||.+... ..|.+..           .|.....  .|.....|....+ 
T Consensus         2 ~dideC~~-~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~--~c~~~~~C~~~~g~   77 (147)
T 2w86_A            2 ADIDECES-SPCIN-GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININ--GATLKSQCCSSLGA   77 (147)
T ss_dssp             CCCCGGGG-CCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEE--EEECHHHHHTTTCS
T ss_pred             CcCccCcC-CCCCC-CEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCC--ccccCCccccCcCc
Confidence            47899985 78975 69999999999999999998643 3343321           1110000  0000001111111 


Q ss_pred             ---------CeeeeCCCCceeCCCCcceeeCCCCCCC--CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856          85 ---------GYHCECPPGYHGDAFTTGCVDADECVNR--PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        85 ---------~~~c~c~~g~~~~~~~~~~~~~~~c~~~--~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                               .+.|.|.+||.+. ....|.+|+||...  .|.+ +.|+++.++|.|.|++||.
T Consensus        78 ~~g~~C~~c~~~C~C~~Gy~~~-~g~~C~dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~  138 (147)
T 2w86_A           78 AWGSPCTLCQVDPICGKGYSRI-KGTQCEDIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMT  138 (147)
T ss_dssp             EETTTTEECCCCTTTCTTEEEE-ETTEEEECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCC
T ss_pred             ccCCCcccCCCcccCCCccccC-CCCccCccccccCCCCCCCC-CEEECCCCCEEeeCCCCCc
Confidence                     2567899999752 12358899999854  4764 5999999999999999984

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.52  E-value=2.8e-14  Score=81.11  Aligned_cols=94  Identities=34%  Similarity=0.715  Sum_probs=75.1

Q ss_pred             eeeeeeCCCCCCC--CCCCCCCeeeeCCCCeEeeCCCCCccCCC---------CCcccCCcccCCCCCCCCCCCCeeeec
Q psy2856          14 FVVFVDINECAHP--NACGVNALCQNYPGNYTCSCQPGYTGNPF---------EGCIDIDECQYASTHPVCGPGARCTNF   82 (136)
Q Consensus        14 ~~~c~~~~~c~~~--~~~~~~~~C~~~~g~~~C~c~~g~~~~~~---------~~c~~~~~c~~~~~~~~c~~~~~c~~~   82 (136)
                      ...|.++++|...  .+|.+.+.|+++.++|.|.|.+||.+...         ..|.++++|....  .+|.....|++.
T Consensus        38 ~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~--~~C~~~~~C~n~  115 (143)
T 2bou_A           38 METCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQ--HQCDSSTVCFNT  115 (143)
T ss_dssp             TCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTC--CCCCTTSEEEEC
T ss_pred             CCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcC--CCCCCCCEEECC
Confidence            4689999999863  27888899999999999999999998642         2578888887522  148878899999


Q ss_pred             CCCeeeeCCCCceeCCCCcceeeCCCC
Q psy2856          83 PGGYHCECPPGYHGDAFTTGCVDADEC  109 (136)
Q Consensus        83 ~~~~~c~c~~g~~~~~~~~~~~~~~~c  109 (136)
                      .++|.|.|..||.+......|.++++|
T Consensus       116 ~g~y~C~C~~Gy~g~~~~~~C~~~~~C  142 (143)
T 2bou_A          116 VGSYSCRCRPGWKPRHGIPNNQKDTVC  142 (143)
T ss_dssp             SSCEEEECCSSSCBCTTCCSSBTTCCB
T ss_pred             CCCEEeeCCCCcccCCCCccCccCCcc
Confidence            999999999999988766656655554

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.52  E-value=3.6e-14  Score=73.15  Aligned_cols=77  Identities=36%  Similarity=0.924  Sum_probs=62.3

Q ss_pred             eeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCce
Q psy2856          16 VFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYH   95 (136)
Q Consensus        16 ~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~   95 (136)
                      +|.|+|+|..+++|.+ +.|+++.++|.|.|++||.+.. ..|.++++|....   +|.+ ..|++..++|.|.|..||.
T Consensus         1 sC~dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g-~~C~dideC~~~~---~C~~-~~C~n~~g~y~C~C~~G~~   74 (82)
T 1emn_A            1 SAVDMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAG-NECVDTDECSVGN---PCGN-GTCKNVIGGFECTCEEGFE   74 (82)
T ss_dssp             CCCCCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEET-TEEEECCGGGTCC---TTSS-SCEEECSSSEEECCSSSSC
T ss_pred             CCCccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCC-CccCCcccccCCC---CCCC-CEeECCCCCEEeECCCCeE
Confidence            4789999986568864 8999999999999999998532 3578889997422   3765 5899999999999999998


Q ss_pred             eCC
Q psy2856          96 GDA   98 (136)
Q Consensus        96 ~~~   98 (136)
                      +..
T Consensus        75 g~~   77 (82)
T 1emn_A           75 PGP   77 (82)
T ss_dssp             CCS
T ss_pred             eCC
Confidence            754

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.45  E-value=6.3e-13  Score=72.68  Aligned_cols=98  Identities=24%  Similarity=0.529  Sum_probs=64.6

Q ss_pred             eeeeCCCCCCCCC--------CCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCee
Q psy2856          16 VFVDINECAHPNA--------CGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYH   87 (136)
Q Consensus        16 ~c~~~~~c~~~~~--------~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~   87 (136)
                      .+.|+|+|.. ++        |.+++.|+++.++|.|.|.+||.+..+....+.++|.....  .|.  ..|++..++|.
T Consensus         2 ~~~d~d~C~~-~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~--~C~--~~C~n~~g~y~   76 (114)
T 1aut_L            2 KHVDGDQCLV-LPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNG--GCT--HYCLEEVGWRR   76 (114)
T ss_dssp             ------CCCC-CSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGG--GCS--SEEEECSSSEE
T ss_pred             cceecccccC-CCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCC--CCC--CEeECCCCCEE
Confidence            4578899985 66        88899999999999999999999876532122345654221  133  38999999999


Q ss_pred             eeCCCCceeCCCCcceeeCCCCCCCCCCCCCeee
Q psy2856          88 CECPPGYHGDAFTTGCVDADECVNRPCGKDALCS  121 (136)
Q Consensus        88 c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~  121 (136)
                      |.|..||.+......|.++.+   ..|.....++
T Consensus        77 C~C~~G~~~~~~g~~C~~~~~---~pC~~~~~~i  107 (114)
T 1aut_L           77 CSCAPGYKLGDDLLQCHPAVK---FPCGRPWKRM  107 (114)
T ss_dssp             EECCTTEEECTTSSCEEECSS---SCTTCCC---
T ss_pred             eECCCCeeECCCCCccCcCcc---cCCCCCCccC
Confidence            999999998776666776543   2455545554

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.44  E-value=4e-13  Score=76.43  Aligned_cols=88  Identities=27%  Similarity=0.593  Sum_probs=63.5

Q ss_pred             eeeeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCee-eecCCCeeeeCCC
Q psy2856          14 FVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARC-TNFPGGYHCECPP   92 (136)
Q Consensus        14 ~~~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c-~~~~~~~~c~c~~   92 (136)
                      +..|.|+|+|.. ++|.+++.|++..++|.|.|.+||.|..   |..+++|...+.  .|.  ..| .+..++|.|.|..
T Consensus        42 ~~~c~dideC~~-~pC~n~g~C~~~~~~y~C~C~~G~~G~~---C~~~deC~~~~~--~C~--~~C~~n~~g~y~C~C~~  113 (146)
T 1x7a_L           42 WKQYVDGDQCEP-NPCLNGGLCKDDINSYECWCQVGFEGKN---CELDATCNIKNG--RCK--QFCKTGADSKVLCSCTT  113 (146)
T ss_dssp             --------CCSS-CSSCTTCEEEECSSCEEEECCSSEESTT---TCEECCTTSGGG--SCS--SBCCCCSSSCCCCBCCT
T ss_pred             hccCCCcCcCCC-CCCCCCCEeECCCCCEEEecCCCCcCCc---CCCCccccCCCC--CCc--CCCCCCCCCCEEeEcCC
Confidence            457899999984 8999999999999999999999999864   556677865321  254  378 8888999999999


Q ss_pred             CceeCCCCcceeeCCCC
Q psy2856          93 GYHGDAFTTGCVDADEC  109 (136)
Q Consensus        93 g~~~~~~~~~~~~~~~c  109 (136)
                      ||.+......|.++++.
T Consensus       114 Gy~l~~dG~~C~~~~~~  130 (146)
T 1x7a_L          114 GYRLAPDQKSCKPAVPF  130 (146)
T ss_dssp             TEEECTTSSSEEECSSS
T ss_pred             CcEeCCCCCcCCCCCCC
Confidence            99976666668777643

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.41  E-value=2.7e-12  Score=72.23  Aligned_cols=87  Identities=34%  Similarity=0.842  Sum_probs=67.2

Q ss_pred             ee-eeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCc
Q psy2856          16 VF-VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGY   94 (136)
Q Consensus        16 ~c-~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~   94 (136)
                      .| .++++|.. .+|.+.+.|++..++|.|.|.+||.+..+.  .++++|...+    |...+.|+...+.|.|.|.+||
T Consensus        40 ~C~~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~--~~~~~C~~~~----C~~~g~C~~~~g~~~C~C~~G~  112 (135)
T 2vj3_A           40 RCEIDVNECVS-NPCQNDATCLDQIGEFQCICMPGYEGVHCE--VNTDECASSP----CLHNGRCLDKINEFQCECPTGF  112 (135)
T ss_dssp             TSCEECCTTTT-CCCCSSCEEEECSSCEEEECCTTEESSSSC--EECCTTTTCC----STTTCEEEECSSCEEEECCTTE
T ss_pred             cccccCccCCC-CCCCCCCEEeCCCCCceeeCCCCCcCCcce--ecCCcccCCC----cCCCCEeECCCCCeEEECCCCC
Confidence            45 48899985 789989999999999999999999987543  3667786544    8888899999999999999999


Q ss_pred             eeCCCCcceeeCCCCCCC
Q psy2856          95 HGDAFTTGCVDADECVNR  112 (136)
Q Consensus        95 ~~~~~~~~~~~~~~c~~~  112 (136)
                      .+....   .++++|...
T Consensus       113 ~G~~C~---~~i~~C~~~  127 (135)
T 2vj3_A          113 TGHLCQ---VDLHHILDA  127 (135)
T ss_dssp             ESSSSC---EECC-----
T ss_pred             cCCccC---ccCccccCC
Confidence            986543   378888654

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.36  E-value=1.2e-12  Score=67.98  Aligned_cols=78  Identities=44%  Similarity=1.048  Sum_probs=60.5

Q ss_pred             eCCCCCC-CCCCCCCCeeeeCCCCeEeeCCCCCccCC--CCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCce
Q psy2856          19 DINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNP--FEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYH   95 (136)
Q Consensus        19 ~~~~c~~-~~~~~~~~~C~~~~g~~~C~c~~g~~~~~--~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~   95 (136)
                      |+|+|.. +.+|.+ +.|+++.++|.|.|.+||.+..  ...|.++++|...+.  .|. .+.|++..++|.|.|..||.
T Consensus         2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~--~C~-~~~C~n~~g~y~C~C~~G~~   77 (86)
T 1lmj_A            2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPL--LCR-GGVCHNTEGSYRCECPPGHQ   77 (86)
T ss_dssp             CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSS--TTT-TSEEEEETTEEEEESCTTSC
T ss_pred             ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCC--cCC-CCEeEcCCCCEEEECcCCcc
Confidence            7899985 235864 5999999999999999998642  256888999976441  254 46899999999999999998


Q ss_pred             eCCCC
Q psy2856          96 GDAFT  100 (136)
Q Consensus        96 ~~~~~  100 (136)
                      +....
T Consensus        78 ~~~~~   82 (86)
T 1lmj_A           78 LSPNI   82 (86)
T ss_dssp             CCSSS
T ss_pred             cCCCC
Confidence            76543

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.34  E-value=5.1e-12  Score=65.03  Aligned_cols=72  Identities=47%  Similarity=1.115  Sum_probs=57.1

Q ss_pred             cccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCC-CCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856          58 CIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECV-NRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        58 c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~-~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      |.++++|....   +|.+ +.|++..++|.|.|.+||.+..  ..|.++++|. ...|.+ +.|+++.++|.|.|++||.
T Consensus         2 C~dideC~~~~---~C~~-g~C~n~~g~y~C~C~~Gy~~~g--~~C~dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~   74 (82)
T 1emn_A            2 AVDMDECKEPD---VCKH-GQCINTDGSYRCECPFGYILAG--NECVDTDECSVGNPCGN-GTCKNVIGGFECTCEEGFE   74 (82)
T ss_dssp             CCCCCSSSSTT---SCSS-SEECCCSSCCCEECCTTEEEET--TEEEECCGGGTCCTTSS-SCEEECSSSEEECCSSSSC
T ss_pred             CCccccCCCCC---CcCC-CEEEecCCCEEEECCCCeECCC--CccCCcccccCCCCCCC-CEeECCCCCEEeECCCCeE
Confidence            56777887522   3764 6899999999999999998632  3588999997 456764 6999999999999999984

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.34  E-value=8.7e-13  Score=68.71  Aligned_cols=72  Identities=42%  Similarity=1.031  Sum_probs=56.0

Q ss_pred             eCCCCCCCC-CCCCCCeeeeCCCCeEeeCCCCCccCCC-CCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeC--CCCc
Q psy2856          19 DINECAHPN-ACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCIDIDECQYASTHPVCGPGARCTNFPGGYHCEC--PPGY   94 (136)
Q Consensus        19 ~~~~c~~~~-~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c--~~g~   94 (136)
                      |+|+|.... +| +.+.|.++.++|.|.|.+||.+... ..|.++++|...+    |.  ..|++..++|.|.|  ..||
T Consensus         2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~----C~--~~C~n~~g~y~C~C~g~~G~   74 (87)
T 1z6c_A            2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENM----CA--QLCVNYPGGYTCYCDGKKGF   74 (87)
T ss_dssp             CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSC----CS--SEECCCSSSCCEECCSSSCC
T ss_pred             ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCC----CC--CEEEccCCCEEEECCCCcCC
Confidence            689998522 37 6789999999999999999986532 4578888997544    75  68999999999999  4666


Q ss_pred             eeC
Q psy2856          95 HGD   97 (136)
Q Consensus        95 ~~~   97 (136)
                      ...
T Consensus        75 ~~~   77 (87)
T 1z6c_A           75 KLA   77 (87)
T ss_dssp             BCC
T ss_pred             ccc
Confidence            543

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.30  E-value=1.5e-12  Score=77.01  Aligned_cols=85  Identities=24%  Similarity=0.618  Sum_probs=30.2

Q ss_pred             eeeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCccc-C-CcccCCCCCCCCCCCCeeeecCCCeeeeCCC
Q psy2856          15 VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCID-I-DECQYASTHPVCGPGARCTNFPGGYHCECPP   92 (136)
Q Consensus        15 ~~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~-~-~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~   92 (136)
                      ..|.++++|.. ++|.+++.|++..++|.|.|.+||.|..   |.. + ++|...+.  .|.  ..|.+..++|.|.|..
T Consensus        37 ~~c~dideC~~-~pC~ngg~C~n~~g~y~C~C~~Gf~G~~---Ce~~i~deC~~~~~--~C~--~~C~n~~gsy~C~C~~  108 (195)
T 1nfu_B           37 NKYKDGDQCET-SPCQNQGKCKDGLGEYTCTCLEGFEGKN---CELFTRKLCSLDNG--DCD--QFCHEEQNSVVCSCAR  108 (195)
T ss_dssp             ------------------------------------------------CCGGGTGGG--GCS--SEEEEETTEEEEECCT
T ss_pred             ccCCCCcccCC-CCCCCCCEeECCCCCeeEeCCCCceecc---ccccccccccCCCC--CCC--CEeECCCCCeEEECCC
Confidence            46899999984 8899999999999999999999999865   433 4 66765321  254  3899999999999999


Q ss_pred             CceeCCCCcceeeCC
Q psy2856          93 GYHGDAFTTGCVDAD  107 (136)
Q Consensus        93 g~~~~~~~~~~~~~~  107 (136)
                      ||.+......|.+++
T Consensus       109 Gy~l~~dG~~C~~~~  123 (195)
T 1nfu_B          109 GYTLADNGKACIPTG  123 (195)
T ss_dssp             TEEECTTSSCEEESS
T ss_pred             CceeCCCCCccccCC
Confidence            999665555676654

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.30  E-value=8.1e-12  Score=64.87  Aligned_cols=73  Identities=44%  Similarity=1.178  Sum_probs=56.1

Q ss_pred             cCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCC-CCcceeeCCCCCCCC--CCCCCeeeecCCCeeEeCCCCCC
Q psy2856          60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDA-FTTGCVDADECVNRP--CGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        60 ~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~-~~~~~~~~~~c~~~~--~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ++++|...+.  .|.+ ..|++..++|.|.|.+||.+.. ....|.+++||....  |. ++.|+++.++|.|.|++||.
T Consensus         2 dideC~~~~~--~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~   77 (86)
T 1lmj_A            2 DIDECRISPD--LCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQ   77 (86)
T ss_dssp             CCCTTTTCSS--TTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSC
T ss_pred             ccccccCCCC--CCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcCCCCEEEECcCCcc
Confidence            3566654331  3654 4899999999999999998653 234688999998765  54 47999999999999999984

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.29  E-value=2.2e-11  Score=83.34  Aligned_cols=93  Identities=32%  Similarity=0.638  Sum_probs=74.1

Q ss_pred             eeeeeCCCCCCCCC--CCCCC---eeeeCCCCeEee-CCCCCccCCCC------------CcccCCcccCCCCCCCCCCC
Q psy2856          15 VVFVDINECAHPNA--CGVNA---LCQNYPGNYTCS-CQPGYTGNPFE------------GCIDIDECQYASTHPVCGPG   76 (136)
Q Consensus        15 ~~c~~~~~c~~~~~--~~~~~---~C~~~~g~~~C~-c~~g~~~~~~~------------~c~~~~~c~~~~~~~~c~~~   76 (136)
                      ..|.++++|.. .+  |.+.+   .|+++.++|.|. |++||.+..+.            .|..+++|....  .+|...
T Consensus        39 ~~CeDiDEC~~-~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~--~pC~~~  115 (634)
T 1yo8_A           39 THCEDLDECAL-VPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKT--HNCHKH  115 (634)
T ss_dssp             SSCCBCCTTTT-SCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTC--CCCCTT
T ss_pred             CCccccccccC-CCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCC--cccccC
Confidence            67999999985 44  98888   999999999998 99999987532            478889997642  248888


Q ss_pred             CeeeecC----CCeeeeCCCCceeCCCCccee---eCCCCCCC
Q psy2856          77 ARCTNFP----GGYHCECPPGYHGDAFTTGCV---DADECVNR  112 (136)
Q Consensus        77 ~~c~~~~----~~~~c~c~~g~~~~~~~~~~~---~~~~c~~~  112 (136)
                      ..|++..    ++|.|.|..||.+...  .|.   +++||...
T Consensus       116 ~~Cvnt~~~~~GsY~C~C~~Gy~GdG~--~Ce~d~DiDeC~~~  156 (634)
T 1yo8_A          116 AECIYLGHFSDPMYKCECQTGYAGDGL--ICGEDSDLDGWPNL  156 (634)
T ss_dssp             EEEEECCTTCSSSEEEEECTTEEESSS--SEEECTTSSSSCSS
T ss_pred             ccccccccccccceeeeccCCccccCc--ccccccCcccccCC
Confidence            8999988    8999999999998432  364   67888543

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.29  E-value=6.7e-12  Score=71.16  Aligned_cols=89  Identities=25%  Similarity=0.568  Sum_probs=64.8

Q ss_pred             eeeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCC-CCCCCCCCCeeeecCC-CeeeeCCC
Q psy2856          15 VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYAS-THPVCGPGARCTNFPG-GYHCECPP   92 (136)
Q Consensus        15 ~~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~-~~~~c~~~~~c~~~~~-~~~c~c~~   92 (136)
                      ..|.|+|+|.. ++|.+++.|+++.++|.|.|.+||.|..+.  ..++++..-. ....|.  ..|++..+ +|.|.|..
T Consensus        42 ~~c~did~C~~-~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~--~~~~~c~~c~~~~~~C~--~~C~~~~g~~y~C~C~~  116 (142)
T 2c4f_L           42 ISYSDGDQCAS-SPCQNGGSCKDQLQSYICFCLPAFEGRNCE--THKDDQLICVNENGGCE--QYCSDHTGTKRSCRCHE  116 (142)
T ss_dssp             HHHTTCCGGGG-CCCCTTCEEEEETTEEEEECCTTEESTTSC--EEGGGCCSTTTGGGGCS--SEEECCTTSCCEEECCT
T ss_pred             ccCCccCcCcC-CCcCCCCEEeCCCCCEEeeCCCCccCCccc--cCccccccccCCCCCcc--CEeECCCCCCEEEECCC
Confidence            45788999984 889999999999999999999999987543  1234432111 000122  38988888 99999999


Q ss_pred             CceeCCCCcceeeCCC
Q psy2856          93 GYHGDAFTTGCVDADE  108 (136)
Q Consensus        93 g~~~~~~~~~~~~~~~  108 (136)
                      ||.+......|.++++
T Consensus       117 Gy~l~~dG~~C~~~~e  132 (142)
T 2c4f_L          117 GYSLLADGVSCTPTVE  132 (142)
T ss_dssp             TEEECTTSSCEEESSS
T ss_pred             CceECCCCCCCCCCCc
Confidence            9997665566777765

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.27  E-value=2.9e-12  Score=71.92  Aligned_cols=85  Identities=24%  Similarity=0.618  Sum_probs=29.8

Q ss_pred             eeeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCccc-C-CcccCCCCCCCCCCCCeeeecCCCeeeeCCC
Q psy2856          15 VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCID-I-DECQYASTHPVCGPGARCTNFPGGYHCECPP   92 (136)
Q Consensus        15 ~~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~-~-~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~   92 (136)
                      ..|.++|+|.. ++|.+++.|++..++|.|.|.+||.|..   |.. + ++|...+.  .|.  ..|++..++|.|.|.+
T Consensus        37 ~~c~d~d~C~~-~pC~n~g~C~~~~~~y~C~C~~G~~G~~---C~~~i~d~C~~~~~--~C~--~~C~~~~g~y~C~C~~  108 (134)
T 2vh0_B           37 NKYKDGDQCET-SPCQNQGKCKDGLGEYTCTCLEGFEGKN---CELFTRKLCSLDNG--DCD--QFCHEEQNSVVCSCAR  108 (134)
T ss_dssp             ------------------------------------------------CCGGGTGGG--GCS--SEEEEETTEEEEECCT
T ss_pred             ccCCCcCcCCC-CCCCCcCCcccCCCCEEeeCCCCccCCc---cccCCCCccccCCC--CCC--CEeECCCCCEEEECCC
Confidence            46889999984 7899999999999999999999999864   333 4 66764321  254  3899999999999999


Q ss_pred             CceeCCCCcceeeCC
Q psy2856          93 GYHGDAFTTGCVDAD  107 (136)
Q Consensus        93 g~~~~~~~~~~~~~~  107 (136)
                      ||.+......|.+++
T Consensus       109 Gy~l~~~g~~C~~~~  123 (134)
T 2vh0_B          109 GYTLADNGKACIPTG  123 (134)
T ss_dssp             TEEECTTSSCEEESS
T ss_pred             CcEECCCCCccCcCC
Confidence            999766555576654

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.26  E-value=2.6e-11  Score=77.30  Aligned_cols=87  Identities=31%  Similarity=0.674  Sum_probs=68.1

Q ss_pred             eeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeC
Q psy2856          18 VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD   97 (136)
Q Consensus        18 ~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~   97 (136)
                      .|+|+|.. ++|.+++.|.+..++|.|.|.+||.+..++  .++++|.... ..+|.+  .|.+..++|.|.|..||.+.
T Consensus         3 ~d~~~C~~-~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~--~~~~eC~~~~-~~~C~~--~C~~~~g~~~C~C~~g~~~~   76 (317)
T 3h5c_B            3 KGGSPCIS-QPCLHNGSCQDSIWGYTCTCSPGYEGSNCE--LAKNECHPER-TDGCQH--FCLPGQESYTCSCAQGYRLG   76 (317)
T ss_dssp             ---CCTTS-CCCTTTCCCCCCSSSCCCCCSSSCCSSSSC--CCSSSCCTTC-TTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred             ccCCcCCC-CCCCCCCEeECCCCCeEEECCCCCcCCccc--cCcccCCCCC-CCCCcC--ccccCCCeeEEecccccccc
Confidence            57899985 889999999999999999999999987543  3788887521 013764  89999999999999999987


Q ss_pred             CCCcceeeCCCCC
Q psy2856          98 AFTTGCVDADECV  110 (136)
Q Consensus        98 ~~~~~~~~~~~c~  110 (136)
                      .....|.++++|.
T Consensus        77 ~~~~~C~~~~~c~   89 (317)
T 3h5c_B           77 EDHKQCVPHDQCA   89 (317)
T ss_dssp             TTSSCCEECSSCC
T ss_pred             ccccccccccccc
Confidence            7666788887764

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.20  E-value=6.5e-11  Score=67.19  Aligned_cols=77  Identities=29%  Similarity=0.744  Sum_probs=62.1

Q ss_pred             eeeCCCCCCCCCCCCCCeee-------eCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeee
Q psy2856          17 FVDINECAHPNACGVNALCQ-------NYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCE   89 (136)
Q Consensus        17 c~~~~~c~~~~~~~~~~~C~-------~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~   89 (136)
                      |.++++|.. ++|.+.+.|.       ++.++|.|.|.+||.+..+.  .++++|...+    |.....|++..+.|.|.
T Consensus        49 c~~~~~C~~-~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~--~~i~~C~~~~----C~~~~~C~~~~g~~~C~  121 (143)
T 4d90_A           49 PTSAGPCTP-NPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQ--HNINECEVEP----CKNGGICTDLVANYSCE  121 (143)
T ss_dssp             CCCCCTTSS-CCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSC--EECCTTTTCC----SCTTCEEEEETTEEEEE
T ss_pred             cccCCcCCC-CCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcc--cCCCcCCCCC----CCCCCEeECCCCCeEeE
Confidence            345677764 7899999999       66689999999999887543  3788887544    88889999999999999


Q ss_pred             CCCCceeCCCC
Q psy2856          90 CPPGYHGDAFT  100 (136)
Q Consensus        90 c~~g~~~~~~~  100 (136)
                      |..||.+....
T Consensus       122 C~~G~~G~~c~  132 (143)
T 4d90_A          122 CPGEFMGRNCQ  132 (143)
T ss_dssp             CCTTCBSTTSC
T ss_pred             CCCCCccCCce
Confidence            99999987653

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.19  E-value=3e-11  Score=63.31  Aligned_cols=76  Identities=20%  Similarity=0.470  Sum_probs=58.7

Q ss_pred             CeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCccee--eCCCCCCCCCCCCC
Q psy2856          41 NYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCV--DADECVNRPCGKDA  118 (136)
Q Consensus        41 ~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~--~~~~c~~~~~~~~~  118 (136)
                      +|.|.|.+||.+...    ++++|...+    |      ++..+.|.|.|.+||.      .|.  ++++|...+|.+++
T Consensus         1 sy~C~C~~g~~g~~c----~~~~c~~~p----C------~n~~~~y~C~C~~G~~------~C~~~~~~~C~~~pC~ngg   60 (91)
T 1tpg_A            1 SYQVICRDEKTQMIY----QQHQSWLRP----V------LRSNRVEYCWCNSGRA------QCHSVPVKSCSEPRCFNGG   60 (91)
T ss_dssp             CCCCCCBCSSSCCBC----CSSCEEEEE----C------SSSSCEEEEECSSSCC------BCCEECEEECSSCCSCTTC
T ss_pred             CeeeECCCCCcCCeE----CCCcccCCc----c------ccCCCCcEeECCCCCc------ccccCcCCcccCCCCCCCC
Confidence            578999999988632    355555432    3      3345678999999996      253  68899988999999


Q ss_pred             eeeecC--CCeeEeCCCCCC
Q psy2856         119 LCSNVD--GSYTCTCPPGFR  136 (136)
Q Consensus       119 ~c~~~~--g~~~c~C~~g~~  136 (136)
                      .|++..  ++|.|.|++||.
T Consensus        61 ~C~~~~~~~~~~C~C~~G~~   80 (91)
T 1tpg_A           61 TCQQALYFSDFVCQCPEGFA   80 (91)
T ss_dssp             EEEEESSSSCEEEECCTTCB
T ss_pred             EeecCCCCCCeEeECCCCCc
Confidence            999987  899999999983

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.17  E-value=4.6e-12  Score=68.33  Aligned_cols=78  Identities=33%  Similarity=0.803  Sum_probs=32.7

Q ss_pred             eeeeeeCCCCCCC-CCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCC
Q psy2856          14 FVVFVDINECAHP-NACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPP   92 (136)
Q Consensus        14 ~~~c~~~~~c~~~-~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~   92 (136)
                      ...| ++|+|... ..|  .+.|.++.++|.|.|++||.+.....|.++++|....   +|.  ..|++..++|.|.|..
T Consensus        24 ~~~C-d~neC~~~~~~C--~~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~---~C~--~~C~n~~gsy~C~C~~   95 (107)
T 2w2n_E           24 QGAM-GTNECLDNNGGC--SYVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPD---TCS--QLCVNLEGGYKCQCEE   95 (107)
T ss_dssp             SCCB-SCCGGGTGGGGC--SSEEECCSBSCEEECCTTCEEETTTEEEC--------------------------------
T ss_pred             CCCC-cCccCcCCCCCC--CCEeEeCCCCeEEECCCCccccCCCccccccccCCCC---CcC--CeeecCCCCEEEECCC
Confidence            3444 78888742 244  3689999999999999999985435688889997422   364  6899999999999999


Q ss_pred             CceeCCC
Q psy2856          93 GYHGDAF   99 (136)
Q Consensus        93 g~~~~~~   99 (136)
                      ||.+...
T Consensus        96 Gy~~~~d  102 (107)
T 2w2n_E           96 GFQLDPH  102 (107)
T ss_dssp             -------
T ss_pred             CceECCC
Confidence            9987543

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.16  E-value=4e-11  Score=68.17  Aligned_cols=72  Identities=26%  Similarity=0.685  Sum_probs=53.9

Q ss_pred             CcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCee-eecCCCeeEeCCCCC
Q psy2856          57 GCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALC-SNVDGSYTCTCPPGF  135 (136)
Q Consensus        57 ~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c-~~~~g~~~c~C~~g~  135 (136)
                      .|.++++|...+    |.+++.|++..++|.|.|..||.+..    |.++++|........+.| +++.++|.|.|++||
T Consensus        44 ~c~dideC~~~p----C~n~g~C~~~~~~y~C~C~~G~~G~~----C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy  115 (146)
T 1x7a_L           44 QYVDGDQCEPNP----CLNGGLCKDDINSYECWCQVGFEGKN----CELDATCNIKNGRCKQFCKTGADSKVLCSCTTGY  115 (146)
T ss_dssp             ------CCSSCS----SCTTCEEEECSSCEEEECCSSEESTT----TCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTE
T ss_pred             cCCCcCcCCCCC----CCCCCEeECCCCCEEEecCCCCcCCc----CCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCc
Confidence            467888887644    88888999999999999999998754    566788986533344589 999999999999998


Q ss_pred             C
Q psy2856         136 R  136 (136)
Q Consensus       136 ~  136 (136)
                      .
T Consensus       116 ~  116 (146)
T 1x7a_L          116 R  116 (146)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.15  E-value=2.8e-11  Score=62.97  Aligned_cols=71  Identities=45%  Similarity=1.089  Sum_probs=55.2

Q ss_pred             cCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCeeeecCCCeeEeCC--CCC
Q psy2856          60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCP--PGF  135 (136)
Q Consensus        60 ~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~~~~g~~~c~C~--~g~  135 (136)
                      ++++|...+.  .| ..+.|++..++|.|.|.+||.+......|.+++||....|.  +.|+++.++|.|.|+  .||
T Consensus         2 dideC~~~~~--~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n~~g~y~C~C~g~~G~   74 (87)
T 1z6c_A            2 DVDECSLKPS--IC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNYPGGYTCYCDGKKGF   74 (87)
T ss_dssp             CSCSSSSSSS--SB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEECCCSSSCCEECCSSSCC
T ss_pred             ccccccCCCC--CC-CCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEEccCCCEEEECCCCcCC
Confidence            3456654331  25 45788888899999999999976655678899999877775  799999999999994  665

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.05  E-value=1.3e-10  Score=62.65  Aligned_cols=70  Identities=37%  Similarity=0.935  Sum_probs=29.2

Q ss_pred             cCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCC-CCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856          60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVN-RPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        60 ~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~-~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ++++|.....  .|.  ..|++..++|.|.|..||.+.. ...|.+++||.. ..|.  +.|+++.++|.|.|++||.
T Consensus        28 d~neC~~~~~--~C~--~~C~n~~g~y~C~C~~Gy~g~~-g~~C~dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~   98 (107)
T 2w2n_E           28 GTNECLDNNG--GCS--YVCNDLKIGYECLCPDGFQLVA-QRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQ   98 (107)
T ss_dssp             SCCGGGTGGG--GCS--SEEECCSBSCEEECCTTCEEET-TTEEEC--------------------------------
T ss_pred             cCccCcCCCC--CCC--CEeEeCCCCeEEECCCCccccC-CCccccccccCCCCCcC--CeeecCCCCEEEECCCCce
Confidence            5677764321  243  5898888999999999999843 245889999974 4564  7999999999999999984

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=99.05  E-value=4e-10  Score=73.98  Aligned_cols=80  Identities=36%  Similarity=0.847  Sum_probs=61.6

Q ss_pred             CCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCC
Q psy2856          21 NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFT  100 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~  100 (136)
                      |||.. .++...+.|.+++++|.|.|++||.+.....|.++++|....   .|.  ..|.+..++|.|.|..||.+....
T Consensus         1 ~eC~~-~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~---~C~--~~C~n~~g~~~C~C~~g~~~~~~~   74 (400)
T 3p5b_L            1 NECLD-NNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPD---TCS--QLCVNLEGGYKCQCEEGFQLDPHT   74 (400)
T ss_dssp             CCTTT-TGGGCSSEEEECSSSEEEECCTTEEECSSSCEEECCCCSTTS---SCS--SCCBCCSSSCBCCCCTTCCCCTTT
T ss_pred             CcccC-CCCCCCCEeECCCCCeEEECCCCCCcCCCCcccCchhhhccC---CCC--CccCCCccceeeeccccccccccc
Confidence            57764 455567899999999999999999864335688999997432   365  489999999999999999877655


Q ss_pred             cceeeC
Q psy2856         101 TGCVDA  106 (136)
Q Consensus       101 ~~~~~~  106 (136)
                      ..|.++
T Consensus        75 ~~C~~~   80 (400)
T 3p5b_L           75 KACKAV   80 (400)
T ss_dssp             SSCCCS
T ss_pred             cceeec
Confidence            445443

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.01  E-value=6.7e-11  Score=70.04  Aligned_cols=72  Identities=26%  Similarity=0.677  Sum_probs=23.5

Q ss_pred             CcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceee-C-CCCCCCCCCCCCeeeecCCCeeEeCCCC
Q psy2856          57 GCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVD-A-DECVNRPCGKDALCSNVDGSYTCTCPPG  134 (136)
Q Consensus        57 ~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~-~-~~c~~~~~~~~~~c~~~~g~~~c~C~~g  134 (136)
                      .|.++++|...+    |.+++.|+...++|.|.|..||.+..    |.+ + ++|......+.+.|+++.++|.|.|++|
T Consensus        38 ~c~dideC~~~p----C~ngg~C~n~~g~y~C~C~~Gf~G~~----Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~G  109 (195)
T 1nfu_B           38 KYKDGDQCETSP----CQNQGKCKDGLGEYTCTCLEGFEGKN----CELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARG  109 (195)
T ss_dssp             ---------------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTT
T ss_pred             cCCCCcccCCCC----CCCCCEeECCCCCeeEeCCCCceecc----ccccccccccCCCCCCCCEeECCCCCeEEECCCC
Confidence            467788887654    88888999988999999999998765    444 5 7887653333459999999999999999


Q ss_pred             CC
Q psy2856         135 FR  136 (136)
Q Consensus       135 ~~  136 (136)
                      |.
T Consensus       110 y~  111 (195)
T 1nfu_B          110 YT  111 (195)
T ss_dssp             EE
T ss_pred             ce
Confidence            83

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.98  E-value=9.8e-10  Score=59.94  Aligned_cols=63  Identities=25%  Similarity=0.634  Sum_probs=47.7

Q ss_pred             CCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856          73 CGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        73 c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      |.+++.|++..++|.|.|..||.+..+.. ..++++|........+.|+++.++|.|.|++||.
T Consensus        22 C~~~g~C~~~~~~y~C~C~~G~~G~~C~~-~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~   84 (114)
T 1aut_L           22 CCGHGTCIDGIGSFSCDCRSGWEGRFCQR-EVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYK   84 (114)
T ss_dssp             TTTSEEECCCSSCCCEEECTTEESTTSCE-ECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEE
T ss_pred             CCCcCCCCCCCCCcEeeCCCCCcCCCcCc-CCcCCcCcCCCCCCCCEeECCCCCEEeECCCCee
Confidence            66677898888999999999999876432 1123468754333445999999999999999983

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.97  E-value=1.5e-09  Score=71.31  Aligned_cols=61  Identities=38%  Similarity=0.953  Sum_probs=49.9

Q ss_pred             CCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCC-CCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856          73 CGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVN-RPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        73 c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~-~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      +.....|.+..++|.|.|.+||.+. ....|.+++||.. ..|  .+.|+++.|+|.|.|.+||.
T Consensus         8 ~~c~~~C~~~~~~y~C~C~~G~~~~-~~~~C~dideC~~~~~C--~~~C~n~~g~~~C~C~~g~~   69 (400)
T 3p5b_L            8 GGCSHVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQDPDTC--SQLCVNLEGGYKCQCEEGFQ   69 (400)
T ss_dssp             GGCSSEEEECSSSEEEECCTTEEEC-SSSCEEECCCCSTTSSC--SSCCBCCSSSCBCCCCTTCC
T ss_pred             CCCCCEeECCCCCeEEECCCCCCcC-CCCcccCchhhhccCCC--CCccCCCccceeeecccccc
Confidence            3445789999999999999999973 3456899999984 345  45999999999999999984

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.94  E-value=3.7e-10  Score=73.79  Aligned_cols=83  Identities=29%  Similarity=0.653  Sum_probs=21.4

Q ss_pred             eCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeC
Q psy2856          19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD   97 (136)
Q Consensus        19 ~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~   97 (136)
                      |+|+|.. +++...+.|.+..|+|.|.|.+||..... ..|.++++|....   .|.  ..|.+..++|.|.|.+||.+.
T Consensus         2 ~~~~C~~-~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~---~C~--~~C~~~~g~~~C~C~~g~~l~   75 (386)
T 3v65_B            2 GEENCNV-NNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEG---YCS--QGCTNSEGAFQCWCEAGYELR   75 (386)
T ss_dssp             ------------------------------------------------------CCT--TEEC-----CCEECCTTEEEC
T ss_pred             CcCcccC-CCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeCCcC---ccc--CcCCCCCCCCeEEECCCceEc
Confidence            6789975 44444568988889999999999985432 5688899996322   365  359999999999999999976


Q ss_pred             CCCcceeeCC
Q psy2856          98 AFTTGCVDAD  107 (136)
Q Consensus        98 ~~~~~~~~~~  107 (136)
                      .....|..++
T Consensus        76 ~d~~~C~~~~   85 (386)
T 3v65_B           76 PDRRSCKALG   85 (386)
T ss_dssp             TTSSCEEECS
T ss_pred             CCCCeECCcc
Confidence            6555566544

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.93  E-value=3.4e-09  Score=74.88  Aligned_cols=57  Identities=39%  Similarity=0.955  Sum_probs=47.7

Q ss_pred             CeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCeeeecCCCeeEeCCCCC
Q psy2856          77 ARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGF  135 (136)
Q Consensus        77 ~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~  135 (136)
                      ..|.+..++|.|.|..||.+ .....|.+++||.. ...+.+.|+++.|+|.|.|++||
T Consensus       324 ~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~~-~~~C~~~C~n~~gsy~C~C~~Gy  380 (791)
T 3m0c_C          324 HVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGF  380 (791)
T ss_dssp             SEEEECSBSEEEECCTTCEE-ETTTEEECCCCCSS-SSSCTTTCCBCSSCBCCCCCSSE
T ss_pred             ccccCCCCCcccCCCCCCcc-CCCCccccCcccCC-CCCCCCeeecCCCCceeecCCCC
Confidence            58999999999999999987 33456899999983 33445799999999999999998

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.93  E-value=2.2e-10  Score=64.26  Aligned_cols=72  Identities=26%  Similarity=0.677  Sum_probs=23.0

Q ss_pred             CcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceee-C-CCCCCCCCCCCCeeeecCCCeeEeCCCC
Q psy2856          57 GCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVD-A-DECVNRPCGKDALCSNVDGSYTCTCPPG  134 (136)
Q Consensus        57 ~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~-~-~~c~~~~~~~~~~c~~~~g~~~c~C~~g  134 (136)
                      .|.++++|...+    |.+++.|+...++|.|.|..||.+..    |.+ + ++|........+.|+++.++|.|.|++|
T Consensus        38 ~c~d~d~C~~~p----C~n~g~C~~~~~~y~C~C~~G~~G~~----C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~G  109 (134)
T 2vh0_B           38 KYKDGDQCETSP----CQNQGKCKDGLGEYTCTCLEGFEGKN----CELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARG  109 (134)
T ss_dssp             ---------------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTT
T ss_pred             cCCCcCcCCCCC----CCCcCCcccCCCCEEeeCCCCccCCc----cccCCCCccccCCCCCCCEeECCCCCEEEECCCC
Confidence            356778887544    88888999888899999999998754    444 5 7787643333359999999999999999


Q ss_pred             CC
Q psy2856         135 FR  136 (136)
Q Consensus       135 ~~  136 (136)
                      |.
T Consensus       110 y~  111 (134)
T 2vh0_B          110 YT  111 (134)
T ss_dssp             EE
T ss_pred             cE
Confidence            83

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.91  E-value=2.3e-09  Score=60.72  Aligned_cols=72  Identities=28%  Similarity=0.654  Sum_probs=52.9

Q ss_pred             cccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCCCC---CCCCeeeecCC-CeeEeCCC
Q psy2856          58 CIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPC---GKDALCSNVDG-SYTCTCPP  133 (136)
Q Consensus        58 c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~---~~~~~c~~~~g-~~~c~C~~  133 (136)
                      +.++++|...+    |.+++.|++..++|.|.|..||.+..+..   +++++..-.+   ...+.|+++.+ +|.|.|++
T Consensus        44 c~did~C~~~p----C~n~g~C~~~~g~y~C~C~~G~~G~~C~~---~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~  116 (142)
T 2c4f_L           44 YSDGDQCASSP----CQNGGSCKDQLQSYICFCLPAFEGRNCET---HKDDQLICVNENGGCEQYCSDHTGTKRSCRCHE  116 (142)
T ss_dssp             HTTCCGGGGCC----CCTTCEEEEETTEEEEECCTTEESTTSCE---EGGGCCSTTTGGGGCSSEEECCTTSCCEEECCT
T ss_pred             CCccCcCcCCC----cCCCCEEeCCCCCEEeeCCCCccCCcccc---CccccccccCCCCCccCEeECCCCCCEEEECCC
Confidence            45677887544    88888999999999999999998765432   2455422222   22348999999 99999999


Q ss_pred             CCC
Q psy2856         134 GFR  136 (136)
Q Consensus       134 g~~  136 (136)
                      ||.
T Consensus       117 Gy~  119 (142)
T 2c4f_L          117 GYS  119 (142)
T ss_dssp             TEE
T ss_pred             Cce
Confidence            983

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.83  E-value=7.5e-10  Score=72.37  Aligned_cols=69  Identities=28%  Similarity=0.763  Sum_probs=13.3

Q ss_pred             CCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCC-CCCCCCCeeeecCCCeeEeCCCCC
Q psy2856          61 IDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVN-RPCGKDALCSNVDGSYTCTCPPGF  135 (136)
Q Consensus        61 ~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~-~~~~~~~~c~~~~g~~~c~C~~g~  135 (136)
                      +++|...+    +.....|.+..++|.|.|.+||.+......|.+++||.. ..|.  +.|+++.|+|.|.|++||
T Consensus         3 ~~~C~~~~----~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~--~~C~~~~g~~~C~C~~g~   72 (386)
T 3v65_B            3 EENCNVNN----GGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCS--QGCTNSEGAFQCWCEAGY   72 (386)
T ss_dssp             -----------------------------------------------------CCT--TEEC-----CCEECCTTE
T ss_pred             cCcccCCC----CCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeCCcCccc--CcCCCCCCCCeEEECCCc
Confidence            45665443    333457877788899999999987655567899999973 3554  569999999999999997

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.81  E-value=7.6e-09  Score=65.97  Aligned_cols=66  Identities=33%  Similarity=0.857  Sum_probs=52.6

Q ss_pred             cCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCccee-eCCCCCC---CCCCCCCeeeecCCCeeEeCCCCC
Q psy2856          60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCV-DADECVN---RPCGKDALCSNVDGSYTCTCPPGF  135 (136)
Q Consensus        60 ~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~-~~~~c~~---~~~~~~~~c~~~~g~~~c~C~~g~  135 (136)
                      +.++|...+    |.++..|....+.|.|.|.+||.+..    |. +++||..   ..|..  .|+++.++|.|.|++||
T Consensus         4 d~~~C~~~p----C~~~g~C~~~~~~~~C~C~~g~~g~~----C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~   73 (317)
T 3h5c_B            4 GGSPCISQP----CLHNGSCQDSIWGYTCTCSPGYEGSN----CELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGY   73 (317)
T ss_dssp             --CCTTSCC----CTTTCCCCCCSSSCCCCCSSSCCSSS----SCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTE
T ss_pred             cCCcCCCCC----CCCCCEeECCCCCeEEECCCCCcCCc----cccCcccCCCCCCCCCcC--ccccCCCeeEEeccccc
Confidence            455676544    88888898888899999999998764    44 8999986   45653  99999999999999987

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.75  E-value=7.5e-09  Score=60.26  Aligned_cols=86  Identities=29%  Similarity=0.739  Sum_probs=60.5

Q ss_pred             CCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCC
Q psy2856          32 NALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVN  111 (136)
Q Consensus        32 ~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~  111 (136)
                      ++.|.+   .+.|.|.+||.+..+..      |...+   .|.++ .|+   +.+.|.|.+||.+....   .++++|..
T Consensus        76 ~g~C~~---~~~C~C~~G~~G~~C~~------C~~~~---~C~~g-~C~---~~~~C~C~~G~~G~~C~---~~~~~C~~  136 (169)
T 2vj2_A           76 HGSCKL---PGDCRCQYGWQGLYCDK------CIPHP---GCVHG-ICN---EPWQCLCETNWGGQLCD---KDLNYCGT  136 (169)
T ss_dssp             TEECSS---TTCCEECTTEESSSSCE------ECCCT---TCSSE-ECS---STTCCEECTTEETTTTC---EESCHHHH
T ss_pred             CcccCC---CCeeECCCCCCCCCccc------CCCCC---CCCCC-CcC---CCCEEeCCCCCCCCccc---CCCCCCCC
Confidence            445643   46888888888765432      22211   24433 564   46789999999976543   27788875


Q ss_pred             -CCCCCCCeeeec-CCCeeEeCCCCCC
Q psy2856         112 -RPCGKDALCSNV-DGSYTCTCPPGFR  136 (136)
Q Consensus       112 -~~~~~~~~c~~~-~g~~~c~C~~g~~  136 (136)
                       ..|..++.|+++ .++|.|.|++||.
T Consensus       137 ~~~C~~~g~C~~~~~~~~~C~C~~G~~  163 (169)
T 2vj2_A          137 HQPCLNGGTCSNTGPDKYQCSCPEGYS  163 (169)
T ss_dssp             TCCCCTTCEEEECSTTCEEEECCTTCC
T ss_pred             CCCCCCCCEEcCCCCCCcEeECCCCCc
Confidence             578888999996 7899999999984

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.74  E-value=3.5e-08  Score=69.08  Aligned_cols=57  Identities=39%  Similarity=1.023  Sum_probs=47.2

Q ss_pred             CeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCC-CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856          77 ARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNR-PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        77 ~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~-~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ..|.+..++|.|.|..||.+ .....|.+++||... .|  .+.|+++.|+|.|.|++||.
T Consensus       306 ~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~  363 (699)
T 1n7d_A          306 HVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTC--SQLCVNLEGGYKCQCEEGFQ  363 (699)
T ss_dssp             TTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSSSSSC--TTTCCBCSSCBCCCCCSSCB
T ss_pred             CCcccCCCCcEEeCCCCeEc-CCCCcccCccccCCCCcc--ccccccCCCCeeeeeecccc
Confidence            57888889999999999987 334468899999743 45  47999999999999999984

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.67  E-value=4.1e-08  Score=42.95  Aligned_cols=35  Identities=29%  Similarity=0.722  Sum_probs=31.4

Q ss_pred             eCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        19 ~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      |+++|.. ++|.+++.|++..++|.|.|++||.|..
T Consensus         2 d~d~C~~-~pC~ngg~C~~~~~~~~C~C~~G~~G~~   36 (39)
T 1edm_B            2 DGDQCES-NPCLNGGSCKDDINSYECWCPFGFEGKN   36 (39)
T ss_dssp             CCCTTTT-CCCCTTCEEEEETTEEEEECCTTCCSTT
T ss_pred             ccccCCC-CCCCCCCEeEcCCCceEeECCCCCcCCc
Confidence            6889984 8999999999999999999999998864

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.67  E-value=7.3e-08  Score=50.33  Aligned_cols=56  Identities=23%  Similarity=0.645  Sum_probs=45.0

Q ss_pred             eeeCCCCeEeeCCCCCccCCCCCcc--cCCcccCCCCCCCCCCCCeeeecC--CCeeeeCCCCceeCCC
Q psy2856          35 CQNYPGNYTCSCQPGYTGNPFEGCI--DIDECQYASTHPVCGPGARCTNFP--GGYHCECPPGYHGDAF   99 (136)
Q Consensus        35 C~~~~g~~~C~c~~g~~~~~~~~c~--~~~~c~~~~~~~~c~~~~~c~~~~--~~~~c~c~~g~~~~~~   99 (136)
                      |++..++|.|.|.+||.     .|.  ++++|...+    |.+++.|+...  +.|.|.|..||.+..+
T Consensus        25 C~n~~~~y~C~C~~G~~-----~C~~~~~~~C~~~p----C~ngg~C~~~~~~~~~~C~C~~G~~G~~C   84 (91)
T 1tpg_A           25 VLRSNRVEYCWCNSGRA-----QCHSVPVKSCSEPR----CFNGGTCQQALYFSDFVCQCPEGFAGKSC   84 (91)
T ss_dssp             CSSSSCEEEEECSSSCC-----BCCEECEEECSSCC----SCTTCEEEEESSSSCEEEECCTTCBSSSC
T ss_pred             cccCCCCcEeECCCCCc-----ccccCcCCcccCCC----CCCCCEeecCCCCCCeEeECCCCCcCCcC
Confidence            55667899999999996     343  567787644    88889999877  8999999999987654

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.65  E-value=4.1e-08  Score=69.51  Aligned_cols=72  Identities=33%  Similarity=0.812  Sum_probs=57.0

Q ss_pred             CeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCC
Q psy2856          33 ALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADEC  109 (136)
Q Consensus        33 ~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c  109 (136)
                      +.|.++.++|.|.|.+||.+.....|.++++|....   .|.  ..|.+..++|.|.|.+||.+......|.+++++
T Consensus       324 ~~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~~---~C~--~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~~  395 (791)
T 3m0c_C          324 HVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPD---TCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSI  395 (791)
T ss_dssp             SEEEECSBSEEEECCTTCEEETTTEEECCCCCSSSS---SCT--TTCCBCSSCBCCCCCSSEECCSSCCCCEETTSC
T ss_pred             ccccCCCCCcccCCCCCCccCCCCccccCcccCCCC---CCC--CeeecCCCCceeecCCCCEeCCCCceeeecccc
Confidence            489999999999999999863335688999997422   353  589999999999999999987666667766644

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.58  E-value=6.6e-11  Score=72.83  Aligned_cols=105  Identities=14%  Similarity=0.106  Sum_probs=72.9

Q ss_pred             CCCCCCeeeeCCCCeEeeCCCCCccCCCCC---------------------------cccCCcccCCCCCCCCCCCCeee
Q psy2856          28 ACGVNALCQNYPGNYTCSCQPGYTGNPFEG---------------------------CIDIDECQYASTHPVCGPGARCT   80 (136)
Q Consensus        28 ~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~---------------------------c~~~~~c~~~~~~~~c~~~~~c~   80 (136)
                      .+.+++.|++..++|.|.|+.||.+..++.                           |....+|...+    |.+...|+
T Consensus        39 ~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~p----C~ngG~C~  114 (267)
T 4fbr_A           39 KSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIK----SNDGGKTL  114 (267)
T ss_dssp             ECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEE----CSSTTSEE
T ss_pred             CcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCC----CCCCCEEe
Confidence            578899999999999999999998754421                           11112233323    77788888


Q ss_pred             ecCCCeeeeCCCCceeCCCCcc--------------------eeeCC------CCCCCCCCCCCeeeecCCCeeEeCCCC
Q psy2856          81 NFPGGYHCECPPGYHGDAFTTG--------------------CVDAD------ECVNRPCGKDALCSNVDGSYTCTCPPG  134 (136)
Q Consensus        81 ~~~~~~~c~c~~g~~~~~~~~~--------------------~~~~~------~c~~~~~~~~~~c~~~~g~~~c~C~~g  134 (136)
                      ....+|.|.|+.||.+..+...                    +.+-.      .+.+.++...+.|++...+|.|.|++|
T Consensus       115 ~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~G  194 (267)
T 4fbr_A          115 TGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIG  194 (267)
T ss_dssp             EEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEE
T ss_pred             cCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCC
Confidence            8888999999999988654320                    01011      122224667788888888999999998


Q ss_pred             CC
Q psy2856         135 FR  136 (136)
Q Consensus       135 ~~  136 (136)
                      |+
T Consensus       195 f~  196 (267)
T 4fbr_A          195 FR  196 (267)
T ss_dssp             EE
T ss_pred             cc
Confidence            84

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.53  E-value=2.2e-07  Score=65.13  Aligned_cols=81  Identities=36%  Similarity=0.863  Sum_probs=59.6

Q ss_pred             eCCCCCCCC-CCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeC
Q psy2856          19 DINECAHPN-ACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD   97 (136)
Q Consensus        19 ~~~~c~~~~-~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~   97 (136)
                      ++++|...+ .|  .+.|.++.++|.|.|.+||.+.....|.++++|....   .|.  ..|.+..++|.|.|..||.+.
T Consensus       293 ~~~eC~~~~~~C--~~~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~~---~C~--~~C~n~~g~y~C~C~~G~~~~  365 (699)
T 1n7d_A          293 GTNECLDNNGGC--SHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPD---TCS--QLCVNLEGGYKCQCEEGFQLD  365 (699)
T ss_dssp             CCCCTTSSTTTS--CTTCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSSS---SCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred             ccccccccccCc--CCCcccCCCCcEEeCCCCeEcCCCCcccCccccCCCC---ccc--cccccCCCCeeeeeecccccC
Confidence            456665321 23  4689999999999999999974345688999997432   364  589999999999999999976


Q ss_pred             CCCcceeeC
Q psy2856          98 AFTTGCVDA  106 (136)
Q Consensus        98 ~~~~~~~~~  106 (136)
                      .....|.++
T Consensus       366 ~~~~~C~~~  374 (699)
T 1n7d_A          366 PHTKACKAV  374 (699)
T ss_dssp             SSCCCCBCC
T ss_pred             CCCCccccc
Confidence            554445543

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=98.51  E-value=3.7e-08  Score=56.97  Aligned_cols=72  Identities=36%  Similarity=0.834  Sum_probs=50.2

Q ss_pred             cCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCC--CCCCC--C--CCCCeeeecCC----CeeE
Q psy2856          60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADE--CVNRP--C--GKDALCSNVDG----SYTC  129 (136)
Q Consensus        60 ~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~--c~~~~--~--~~~~~c~~~~g----~~~c  129 (136)
                      ++++|....   +|. .+.|++..++|.|.|.+||.+......|.++++  |....  +  ...+.|++..+    +|.|
T Consensus         2 dideC~~~~---~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C   77 (162)
T 1uzk_A            2 DVNECLDPT---TCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASC   77 (162)
T ss_dssp             CCCGGGSTT---SSB-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHH
T ss_pred             ccccCCCCC---CCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCcee
Confidence            456776422   375 579999999999999999998765667888876  76432  2  23578888776    7888


Q ss_pred             eCCCCC
Q psy2856         130 TCPPGF  135 (136)
Q Consensus       130 ~C~~g~  135 (136)
                      .|++||
T Consensus        78 ~C~~G~   83 (162)
T 1uzk_A           78 CCSLGK   83 (162)
T ss_dssp             HTTTCC
T ss_pred             eCCCCC
Confidence            888887

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.49  E-value=6.4e-08  Score=53.03  Aligned_cols=59  Identities=34%  Similarity=0.754  Sum_probs=47.1

Q ss_pred             CeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeC
Q psy2856          33 ALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD   97 (136)
Q Consensus        33 ~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~   97 (136)
                      +.|.+ .++|.|.|++||.+.....|.++++|....   +|  ...|++..++|.|.|..||.+.
T Consensus        53 ~~C~~-~~~y~C~C~~Gy~~~~g~~C~dideC~~~~---~C--~~~C~n~~g~y~C~C~~G~~g~  111 (118)
T 1dx5_I           53 ADCDP-NTQASCECPEGYILDDGFICTDIDECENGG---FC--SGVCHNLPGTFECICGPDSALA  111 (118)
T ss_dssp             CEECT-TSTTCEECCTTEEEETTTEEEECCHHHHCS---SC--SSEEEECSSSEEEEECSSSSCE
T ss_pred             CcccC-CCCeEeECCCCccCCCCCccccccccCCCC---CC--cCeEEeCCCCEEEECCCCCccC
Confidence            67887 589999999999854334578889997622   37  5789999999999999999764

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.45  E-value=3.6e-07  Score=39.86  Aligned_cols=32  Identities=41%  Similarity=0.948  Sum_probs=28.8

Q ss_pred             eCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         105 DADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       105 ~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ++++|...+|.+++.|++..++|.|.|++||.
T Consensus         2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~   33 (39)
T 1edm_B            2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFE   33 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCC
T ss_pred             ccccCCCCCCCCCCEeEcCCCceEeECCCCCc
Confidence            57788888999999999999999999999984

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.44  E-value=1.1e-07  Score=66.25  Aligned_cols=102  Identities=28%  Similarity=0.628  Sum_probs=64.7

Q ss_pred             CCCCCCCCCCCCeeeeCCCCeE---eeCCCCCccCCCCCcc------cCCcccCCCCCCCCCCCCeeeecCCCeeeeCC-
Q psy2856          22 ECAHPNACGVNALCQNYPGNYT---CSCQPGYTGNPFEGCI------DIDECQYASTHPVCGPGARCTNFPGGYHCECP-   91 (136)
Q Consensus        22 ~c~~~~~~~~~~~C~~~~g~~~---C~c~~g~~~~~~~~c~------~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~-   91 (136)
                      +|.. ++|.+.+.|.+..|.+.   |.|.+||.|..++.-.      ..+.|...+....|...+.|..    +.|.|. 
T Consensus       436 ~C~~-~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~  510 (690)
T 3fcs_B          436 ACQA-QAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHS  510 (690)
T ss_dssp             GGGT-TCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECC
T ss_pred             CCcC-CCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeec
Confidence            3443 67888889987778888   9999999998763100      0134543221123666667752    589999 


Q ss_pred             ---CCceeCCCCcceeeCCCCCC---CCCCCCCeeeecCCCeeEeCCCCC
Q psy2856          92 ---PGYHGDAFTTGCVDADECVN---RPCGKDALCSNVDGSYTCTCPPGF  135 (136)
Q Consensus        92 ---~g~~~~~~~~~~~~~~~c~~---~~~~~~~~c~~~~g~~~c~C~~g~  135 (136)
                         .||.|..+..   ++.+|..   ..|..++.|.+    +.|.|++||
T Consensus       511 ~~~~Gy~G~~Ce~---~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy  553 (690)
T 3fcs_B          511 SDFGKITGKYCEC---DDFSCVRYKGEMCSGHGQCSC----GDCLCDSDW  553 (690)
T ss_dssp             CSSCCCBSTTSCB---CSSCCCBSSSSBGGGSEEEET----TEEEECTTE
T ss_pred             CCCCCeeCCCcCc---ccCcCcCCCCCCCCCCCEecC----CeeECcCCC
Confidence               8998876531   4455653   24555667754    567777776

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.43  E-value=7.7e-11  Score=72.53  Aligned_cols=115  Identities=16%  Similarity=0.119  Sum_probs=74.7

Q ss_pred             eeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCc------ccCCC-------------------CC
Q psy2856          16 VFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDE------CQYAS-------------------TH   70 (136)
Q Consensus        16 ~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~------c~~~~-------------------~~   70 (136)
                      .|.+.++|.. .+|.+.++|++...+|.|.|+.||++..++.  ++++      +...+                   ..
T Consensus        95 ~c~~~~eC~s-~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~--~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~  171 (267)
T 4fbr_A           95 RDKQNIVAVS-IKSNDGGKTLTGTTTYNGEGPIGFKSEVTDG--DTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVD  171 (267)
T ss_dssp             CSSCCEEEEE-EECSSTTSEEEEEEEETTSCCEEEEEEECCC--CEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEE
T ss_pred             ccccccccCC-CCCCCCCEEecCCccEEeeCCCCccccCCCC--CcccccccCCcCCccccCCcceecccccccccccCC
Confidence            3444555653 6789999999999999999999998854421  1111      10000                   00


Q ss_pred             CCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCC---------------------CCC--------CCCCCCCeee
Q psy2856          71 PVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADE---------------------CVN--------RPCGKDALCS  121 (136)
Q Consensus        71 ~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~---------------------c~~--------~~~~~~~~c~  121 (136)
                      .+|.++..|+....+|.|.|+.||.+.....   ++++                     |..        ..+...+.|+
T Consensus       172 ~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~---~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ngGtC~  248 (267)
T 4fbr_A          172 AKSNDGGKTLSGTMTYNGEGPIGFRGTLTSP---DTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASSDGGKTL  248 (267)
T ss_dssp             EECSSTTSEEEEEEEETTSCCEEEEEEEEET---TEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECSSTTSEE
T ss_pred             CCCCCCCEeeCCCCCeEEeCCCCcccccccc---ccceeccCCCccCCcccCCCeEEEecCCCCccccCCcCCCCCCEee
Confidence            1266778888888899999999998754321   2222                     110        0345567888


Q ss_pred             ecCCCeeEeCCCCCC
Q psy2856         122 NVDGSYTCTCPPGFR  136 (136)
Q Consensus       122 ~~~g~~~c~C~~g~~  136 (136)
                      +...+|.|.|++||+
T Consensus       249 dg~~sy~CeCp~GF~  263 (267)
T 4fbr_A          249 AGTMIYNGEGPIGFR  263 (267)
T ss_dssp             EEEEEETTSCCEEEE
T ss_pred             CCCcceeecCCCCcc
Confidence            877889999998874

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.40  E-value=1.2e-06  Score=40.93  Aligned_cols=37  Identities=27%  Similarity=0.696  Sum_probs=31.0

Q ss_pred             eCCCCCCC--CCCCCCCeee--eCCCCeEeeCCCCCccCCC
Q psy2856          19 DINECAHP--NACGVNALCQ--NYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        19 ~~~~c~~~--~~~~~~~~C~--~~~g~~~C~c~~g~~~~~~   55 (136)
                      ++++|...  ++|.+++.|.  +..++|.|.|.+||.|..+
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~C   42 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRC   42 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSS
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcC
Confidence            57888752  3899999999  7889999999999998754

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.39  E-value=4.7e-07  Score=42.49  Aligned_cols=38  Identities=26%  Similarity=0.588  Sum_probs=31.1

Q ss_pred             eeCCCCCCCCCCCCCCeee-----eCCCCeEeeCCCCCccCCCC
Q psy2856          18 VDINECAHPNACGVNALCQ-----NYPGNYTCSCQPGYTGNPFE   56 (136)
Q Consensus        18 ~~~~~c~~~~~~~~~~~C~-----~~~g~~~C~c~~g~~~~~~~   56 (136)
                      .++|+|.. +||.++++|.     +..++|.|.|++||.|..++
T Consensus         6 ~~~~eC~s-~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE   48 (55)
T 3u7u_G            6 VKCAEKEK-TFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQ   48 (55)
T ss_dssp             EECCSTTT-TTSCTTCEEEEECCC--CCCEEEEECTTEESTTSC
T ss_pred             ccCCCCcC-CCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcC
Confidence            47899985 8999999994     55679999999999998654

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.20  E-value=6.2e-06  Score=54.63  Aligned_cols=99  Identities=29%  Similarity=0.802  Sum_probs=62.5

Q ss_pred             CCCCCCeeeeCCCCeEeeCCCCCccCCCCC-cccC-------CcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCC
Q psy2856          28 ACGVNALCQNYPGNYTCSCQPGYTGNPFEG-CIDI-------DECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAF   99 (136)
Q Consensus        28 ~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~-c~~~-------~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~   99 (136)
                      +|.+++.|.+  +.+.|.|.+||.|..++. |.+-       +.|...   ..|.....|.  .+.+.|.|.+||.+..+
T Consensus       204 ~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~---~~C~~~g~C~--~~~~~C~C~~G~~G~~C  276 (423)
T 2gy5_A          204 ACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQ---EGCKSYVFCL--PDPYGCSCATGWKGLQC  276 (423)
T ss_dssp             CCCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCST---TTTTTCCEEE--TTTTEEECCBTCBSGGG
T ss_pred             CCCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCC---CCCCCCCEEC--CCCCeEEeCCCcccccc
Confidence            6888889976  467999999999987642 2210       123211   1365556674  46789999999988655


Q ss_pred             Ccceee---CCCCCCC-CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         100 TTGCVD---ADECVNR-PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       100 ~~~~~~---~~~c~~~-~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ...|.+   -+.|... .|.+++.|.+..   .|.|++||.
T Consensus       277 ~~~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~~  314 (423)
T 2gy5_A          277 NEACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGWQ  314 (423)
T ss_dssp             CBCCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTCB
T ss_pred             cCccCCCCcCCcccccccCCCCCEecCCC---ceECCCCCc
Confidence            432221   1223222 566778887654   399999983

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.18  E-value=1.7e-07  Score=44.93  Aligned_cols=37  Identities=27%  Similarity=0.708  Sum_probs=31.9

Q ss_pred             eeeCCCCCCCCCCCCC--CeeeeCCCCeEeeCCCCCc-cCC
Q psy2856          17 FVDINECAHPNACGVN--ALCQNYPGNYTCSCQPGYT-GNP   54 (136)
Q Consensus        17 c~~~~~c~~~~~~~~~--~~C~~~~g~~~C~c~~g~~-~~~   54 (136)
                      +.++|+|.. +||.++  +.|.+..++|.|.|++||. |..
T Consensus         8 ~~~~d~C~s-nPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~   47 (61)
T 2k2s_B            8 SETPAACSS-NPCGPEAAGTCKETNSGYICRCNQGYRISLD   47 (61)
T ss_dssp             TTSCCHHHH-CSSCSSSCCEEEECSSEEEEECCTTEEEEEC
T ss_pred             cCCCCcCcC-CCCcCCCccccccCCCceEeECCCCCccCCC
Confidence            567788874 889888  7999999999999999998 764

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=98.17  E-value=2.6e-06  Score=39.68  Aligned_cols=35  Identities=51%  Similarity=1.157  Sum_probs=28.4

Q ss_pred             eeCCCCCCC---------CCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          18 VDINECAHP---------NACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        18 ~~~~~c~~~---------~~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      .|+|+|...         .+|.  +.|.|+.|+|.|.|.+||.+..
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~   45 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQE   45 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECT
T ss_pred             CccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECC
Confidence            478999752         4564  6999999999999999998754

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=98.15  E-value=2.4e-06  Score=42.36  Aligned_cols=36  Identities=33%  Similarity=0.658  Sum_probs=28.0

Q ss_pred             eeCCCCCC-CCCCCCCCeeeeCCCCeEee-CCCCCccC
Q psy2856          18 VDINECAH-PNACGVNALCQNYPGNYTCS-CQPGYTGN   53 (136)
Q Consensus        18 ~~~~~c~~-~~~~~~~~~C~~~~g~~~C~-c~~g~~~~   53 (136)
                      .|||||.. +++|...+.|+|+.|+|.|. +..||.+.
T Consensus         1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~   38 (71)
T 2kl7_A            1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIND   38 (71)
T ss_dssp             CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred             CccccccCCCCCCCCCCEeECCCCCeEecccCCccccc
Confidence            37899974 34787778999999999997 45577654

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.14  E-value=8.6e-06  Score=52.15  Aligned_cols=85  Identities=29%  Similarity=0.790  Sum_probs=50.8

Q ss_pred             CCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeC
Q psy2856          27 NACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDA  106 (136)
Q Consensus        27 ~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~  106 (136)
                      ++|.+++.|.+   .+.|.|.+||.|..+.   . ..|..     .|.+++.|..   .+.|.|.+||.+..+..     
T Consensus       153 ~~C~~~G~C~~---~~~C~C~~G~~G~~C~---~-~~C~~-----~C~~~G~C~~---~~~C~C~~G~~G~~C~~-----  212 (324)
T 2ygq_A          153 GGCRNGGFCNE---RRICECPDGFHGPHCE---K-ALCTP-----RCMNGGLCVT---PGFCICPPGFYGVNCDK-----  212 (324)
T ss_dssp             SCCCSSCEECT---TSCEECCTTEESSSSC---E-ESSSS-----CCCTTCEECS---SCCEECCTTCBTTTTCB-----
T ss_pred             CCCCCCCEECC---CCeEECCCCCcCCCCC---C-CCCCC-----CCCCCCEEcC---CCEEeCCCCccCCCccc-----
Confidence            46888888864   4789999999987543   1 23431     2666667753   35688888887765421     


Q ss_pred             CCCCCCCCCCCCeeeecCCCeeEeCCCCC
Q psy2856         107 DECVNRPCGKDALCSNVDGSYTCTCPPGF  135 (136)
Q Consensus       107 ~~c~~~~~~~~~~c~~~~g~~~c~C~~g~  135 (136)
                      +.|. ..|..++.|++   .+.|.|++||
T Consensus       213 ~~C~-~~C~~~G~C~~---~~~C~C~~G~  237 (324)
T 2ygq_A          213 ANCS-TTCFNGGTCFY---PGKCICPPGL  237 (324)
T ss_dssp             CCCS-SCCCSSCCBSC---SSCBCCCTTC
T ss_pred             CcCC-CCCCCCCeeCC---CCeeeCCCCc
Confidence            2232 23444455543   2356666655

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=98.08  E-value=2.2e-06  Score=42.17  Aligned_cols=46  Identities=26%  Similarity=0.564  Sum_probs=35.1

Q ss_pred             eeCCCCCCCC-CCCCCCeeeeCCC-CeEeeCCCCCccCCC-CCcccCCccc
Q psy2856          18 VDINECAHPN-ACGVNALCQNYPG-NYTCSCQPGYTGNPF-EGCIDIDECQ   65 (136)
Q Consensus        18 ~~~~~c~~~~-~~~~~~~C~~~~g-~~~C~c~~g~~~~~~-~~c~~~~~c~   65 (136)
                      .|+++|...+ .|  ...|.++.| +|.|.|..||..... .+|.++++|.
T Consensus         3 ~d~~eC~~~nggC--~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~   51 (69)
T 1kli_L            3 DDQLICVNENGGC--EQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   51 (69)
T ss_dssp             SCCCCTTSGGGGC--SSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             cccccccCCCCCc--CCEeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence            5789997533 34  578999998 899999999986543 6677777663

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=98.07  E-value=2.9e-06  Score=39.90  Aligned_cols=43  Identities=26%  Similarity=0.635  Sum_probs=31.8

Q ss_pred             CCCCCC-CCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCcccCCccc
Q psy2856          21 NECAHP-NACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCIDIDECQ   65 (136)
Q Consensus        21 ~~c~~~-~~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~~~c~   65 (136)
                      |+|... ..|  .+.|.|++|+|.|.|.+||..... ..|.++++|.
T Consensus         2 dEC~~~~~~C--~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~   46 (55)
T 2jkh_L            2 KLCSLDNGDC--DQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP   46 (55)
T ss_dssp             CCTTTGGGGC--SSEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred             ccccCCCCCc--CcEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence            667642 245  358999999999999999986533 5677777764

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=98.04  E-value=6.1e-06  Score=38.40  Aligned_cols=32  Identities=44%  Similarity=0.968  Sum_probs=24.1

Q ss_pred             eCCCCCCC--------CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         105 DADECVNR--------PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       105 ~~~~c~~~--------~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      +++||...        .....+.|+|+.|+|.|.|++||.
T Consensus         3 DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~   42 (53)
T 1apq_A            3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYE   42 (53)
T ss_dssp             SCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCE
T ss_pred             ccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCe
Confidence            67778652        122347999999999999999983

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=98.03  E-value=1.2e-05  Score=36.10  Aligned_cols=28  Identities=29%  Similarity=0.655  Sum_probs=24.6

Q ss_pred             CCCCCCeee--eCCCCeEeeCCCCCccCCC
Q psy2856          28 ACGVNALCQ--NYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        28 ~~~~~~~C~--~~~g~~~C~c~~g~~~~~~   55 (136)
                      +|.+++.|.  +..++|.|.|++||.|..+
T Consensus        10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~C   39 (45)
T 1a3p_A           10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRC   39 (45)
T ss_dssp             CCSSSCEEEECTTTSSEEEECCTTEETTTT
T ss_pred             CCCCCCEEEeecCCCCEEEEcCCCCcCCcC
Confidence            899999998  6778999999999998754

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.01  E-value=1.3e-06  Score=41.93  Aligned_cols=34  Identities=29%  Similarity=0.957  Sum_probs=29.1

Q ss_pred             eeeCCCCCCCCCCCC--CeeeecCCCeeEeCCCCCC
Q psy2856         103 CVDADECVNRPCGKD--ALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       103 ~~~~~~c~~~~~~~~--~~c~~~~g~~~c~C~~g~~  136 (136)
                      +.++++|.+.+|.++  +.|++..++|.|.|++||.
T Consensus         8 ~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~   43 (61)
T 2k2s_B            8 SETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYR   43 (61)
T ss_dssp             TTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEE
T ss_pred             cCCCCcCcCCCCcCCCccccccCCCceEeECCCCCc
Confidence            346778888889887  7999999999999999983

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.01  E-value=1.1e-05  Score=56.33  Aligned_cols=92  Identities=25%  Similarity=0.586  Sum_probs=64.4

Q ss_pred             CCCCCCeeeeCCCCeEeeCC----CCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcce
Q psy2856          28 ACGVNALCQNYPGNYTCSCQ----PGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGC  103 (136)
Q Consensus        28 ~~~~~~~C~~~~g~~~C~c~----~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~  103 (136)
                      +|.+++.|.+    +.|.|.    +||.|..++  .+...|.... ...|...+.|..    +.|.|..||.|..+.  |
T Consensus       494 ~Cs~~G~C~~----g~C~C~~~~~~Gy~G~~Ce--~~~~~C~~~~-~~~C~~~G~C~~----g~C~C~~Gy~G~~Ce--C  560 (690)
T 3fcs_B          494 VCSQRGECLC----GQCVCHSSDFGKITGKYCE--CDDFSCVRYK-GEMCSGHGQCSC----GDCLCDSDWTGYYCN--C  560 (690)
T ss_dssp             GGGGSEEECS----SSEEECCCSSCCCBSTTSC--BCSSCCCBSS-SSBGGGSEEEET----TEEEECTTEESSSSC--E
T ss_pred             CCCCCCEEEC----CeeEeecCCCCCeeCCCcC--cccCcCcCCC-CCCCCCCCEecC----CeeECcCCCcCCCCc--c
Confidence            4777788863    589999    999998754  2455565321 113666677864    689999999998764  2


Q ss_pred             -eeCCCCCC---CCCCCCCeeeecCCCeeEeC-CCCCC
Q psy2856         104 -VDADECVN---RPCGKDALCSNVDGSYTCTC-PPGFR  136 (136)
Q Consensus       104 -~~~~~c~~---~~~~~~~~c~~~~g~~~c~C-~~g~~  136 (136)
                       .++++|..   ..|..++.|++    ..|.| ++||.
T Consensus       561 ~~~~~~C~~~~g~~C~~~G~C~~----g~C~C~~~Gy~  594 (690)
T 3fcs_B          561 TTRTDTCMSSNGLLCSGRGKCEC----GSCVCIQPGSY  594 (690)
T ss_dssp             ECCCTTTBCTTSSBTSSSCEEET----TEEECCSTTCB
T ss_pred             CCCCCcccCCCCCCCCCCCEEeC----CEEECCCCCcc
Confidence             24667765   36888889964    28999 88883

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.01  E-value=6.1e-06  Score=38.67  Aligned_cols=32  Identities=28%  Similarity=0.584  Sum_probs=27.0

Q ss_pred             eeCCCCCCCCCCCCCeee-----ecCCCeeEeCCCCC
Q psy2856         104 VDADECVNRPCGKDALCS-----NVDGSYTCTCPPGF  135 (136)
Q Consensus       104 ~~~~~c~~~~~~~~~~c~-----~~~g~~~c~C~~g~  135 (136)
                      .+++||.+.+|.+++.|.     +..++|.|.|++||
T Consensus         6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~   42 (55)
T 3u7u_G            6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEF   42 (55)
T ss_dssp             EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTE
T ss_pred             ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCC
Confidence            478999999999999994     55678999999998

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=97.99  E-value=9.8e-06  Score=51.88  Aligned_cols=56  Identities=32%  Similarity=0.803  Sum_probs=32.4

Q ss_pred             CCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCC
Q psy2856          28 ACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDA   98 (136)
Q Consensus        28 ~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~   98 (136)
                      +|.+++.|..   .+.|.|.+||.|..+.    ...|. .    .|..++.|..   .+.|.|.+||.+..
T Consensus       186 ~C~~~G~C~~---~~~C~C~~G~~G~~C~----~~~C~-~----~C~~~G~C~~---~~~C~C~~G~~G~~  241 (324)
T 2ygq_A          186 RCMNGGLCVT---PGFCICPPGFYGVNCD----KANCS-T----TCFNGGTCFY---PGKCICPPGLEGEQ  241 (324)
T ss_dssp             CCCTTCEECS---SCCEECCTTCBTTTTC----BCCCS-S----CCCSSCCBSC---SSCBCCCTTCCTTT
T ss_pred             CCCCCCEEcC---CCEEeCCCCccCCCcc----cCcCC-C----CCCCCCeeCC---CCeeeCCCCccCCC
Confidence            4666777754   4689999999887542    12232 1    2544455543   24566666666543

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.98  E-value=1.1e-05  Score=37.54  Aligned_cols=32  Identities=28%  Similarity=0.663  Sum_probs=27.0

Q ss_pred             eCCCCCCC---CCCCCCeee--ecCCCeeEeCCCCCC
Q psy2856         105 DADECVNR---PCGKDALCS--NVDGSYTCTCPPGFR  136 (136)
Q Consensus       105 ~~~~c~~~---~~~~~~~c~--~~~g~~~c~C~~g~~  136 (136)
                      ++++|.+.   +|.+++.|+  +..++|.|.|++||.
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~   38 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS   38 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc
Confidence            46778775   788889999  788999999999984

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=97.96  E-value=1.7e-05  Score=39.01  Aligned_cols=48  Identities=25%  Similarity=0.414  Sum_probs=36.5

Q ss_pred             ccCCcccCCCCCCCCCCCCeeeecCC-CeeeeCCCCceeCCCCcceeeCCCCC
Q psy2856          59 IDIDECQYASTHPVCGPGARCTNFPG-GYHCECPPGYHGDAFTTGCVDADECV  110 (136)
Q Consensus        59 ~~~~~c~~~~~~~~c~~~~~c~~~~~-~~~c~c~~g~~~~~~~~~~~~~~~c~  110 (136)
                      .++++|...++  .|  ...|.+..+ +|.|.|..||.+......|.+++|+.
T Consensus         3 ~d~~eC~~~ng--gC--~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~   51 (69)
T 1kli_L            3 DDQLICVNENG--GC--EQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   51 (69)
T ss_dssp             SCCCCTTSGGG--GC--SSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             cccccccCCCC--Cc--CCEeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence            45666754431  14  468999888 79999999999887777899999874

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=97.96  E-value=2.2e-06  Score=48.71  Aligned_cols=57  Identities=35%  Similarity=0.691  Sum_probs=42.6

Q ss_pred             eEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCc
Q psy2856          42 YTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTT  101 (136)
Q Consensus        42 ~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~  101 (136)
                      |.|.|.+||.+.....|.++++|...+.  .|.+ ..|++..++|.|.|..||.+....+
T Consensus        88 ~~C~C~~Gy~~~~g~~C~dideC~~~~~--~C~~-g~C~n~~g~y~C~C~~Gy~g~~~~~  144 (147)
T 2w86_A           88 VDPICGKGYSRIKGTQCEDIDECEVFPG--VCKN-GLCVNTRGSFKCQCPSGMTLDATGR  144 (147)
T ss_dssp             CCTTTCTTEEEEETTEEEECCHHHHSTT--CSSS-SEEEEETTEEEEECCTTCCBCTTSS
T ss_pred             CcccCCCccccCCCCccCccccccCCCC--CCCC-CEEECCCCCEEeeCCCCCccCCCCC
Confidence            6789999997422235778999975332  3764 4899999999999999998865443

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=97.93  E-value=1.8e-05  Score=37.16  Aligned_cols=34  Identities=18%  Similarity=0.415  Sum_probs=29.8

Q ss_pred             CeeeecCCCeeeeCCCCceeCCCCcceeeCCCCC
Q psy2856          77 ARCTNFPGGYHCECPPGYHGDAFTTGCVDADECV  110 (136)
Q Consensus        77 ~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~  110 (136)
                      ..|++..++|.|.|..||.+......|.++++|.
T Consensus        13 ~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~   46 (55)
T 2jkh_L           13 QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP   46 (55)
T ss_dssp             SEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred             cEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence            5899999999999999999877777799999874

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.84  E-value=7.9e-06  Score=39.51  Aligned_cols=41  Identities=29%  Similarity=0.582  Sum_probs=30.8

Q ss_pred             CCCCCCCCCCCCCeeee-----CCCCeEeeCCCCCccCCCCCcccCCcc
Q psy2856          21 NECAHPNACGVNALCQN-----YPGNYTCSCQPGYTGNPFEGCIDIDEC   64 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~-----~~g~~~C~c~~g~~~~~~~~c~~~~~c   64 (136)
                      ++|. .++|.+++.|.+     ..++|.|.|++||.|..++  .+++.+
T Consensus         7 ~~C~-~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce--~~i~~~   52 (63)
T 1hae_A            7 AEKE-KTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT--ENVPMK   52 (63)
T ss_dssp             CHHH-HTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC--EECCSS
T ss_pred             CCCC-CCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccC--cCcCcc
Confidence            4554 378999999986     5689999999999997654  344444

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.84  E-value=1.4e-05  Score=36.00  Aligned_cols=36  Identities=28%  Similarity=0.615  Sum_probs=28.3

Q ss_pred             eCCCCCC--CCCCCCCCeeeeCC--CCeEeeCCCCCccCCC
Q psy2856          19 DINECAH--PNACGVNALCQNYP--GNYTCSCQPGYTGNPF   55 (136)
Q Consensus        19 ~~~~c~~--~~~~~~~~~C~~~~--g~~~C~c~~g~~~~~~   55 (136)
                      ++++|..  .++|.+ +.|....  ++|.|.|.+||.|..+
T Consensus         2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~C   41 (46)
T 1k36_A            2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRC   41 (46)
T ss_dssp             CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTS
T ss_pred             ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCC
Confidence            5677864  268988 8998744  6899999999999754

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.82  E-value=3.2e-06  Score=52.67  Aligned_cols=45  Identities=31%  Similarity=0.796  Sum_probs=33.3

Q ss_pred             eeCCCCCC-CCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCc
Q psy2856          18 VDINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDE   63 (136)
Q Consensus        18 ~~~~~c~~-~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~   63 (136)
                      .|+|||.. .+.|...+.|.|+.|+|.|.|++||.++.. .|.+++.
T Consensus         3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~-~C~d~d~   48 (285)
T 1gl4_A            3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGR-QCVAEGS   48 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSS-SEEETTC
T ss_pred             ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCC-cCCCCCC
Confidence            47899973 357888899999999999999999998763 4766554

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=97.80  E-value=2.1e-05  Score=45.69  Aligned_cols=61  Identities=31%  Similarity=0.883  Sum_probs=45.6

Q ss_pred             CCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeec-CCCeeeeCCCCceeCC
Q psy2856          29 CGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNF-PGGYHCECPPGYHGDA   98 (136)
Q Consensus        29 ~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~-~~~~~c~c~~g~~~~~   98 (136)
                      |.+ +.|.   +.+.|.|.+||.+..+.  .++++|....   +|.++..|+.. .+++.|.|.+||.+..
T Consensus       105 C~~-g~C~---~~~~C~C~~G~~G~~C~--~~~~~C~~~~---~C~~~g~C~~~~~~~~~C~C~~G~~G~~  166 (169)
T 2vj2_A          105 CVH-GICN---EPWQCLCETNWGGQLCD--KDLNYCGTHQ---PCLNGGTCSNTGPDKYQCSCPEGYSGPN  166 (169)
T ss_dssp             CSS-EECS---STTCCEECTTEETTTTC--EESCHHHHTC---CCCTTCEEEECSTTCEEEECCTTCCSTT
T ss_pred             CCC-CCcC---CCCEEeCCCCCCCCccc--CCCCCCCCCC---CCCCCCEEcCCCCCCcEeECCCCCcCcC
Confidence            543 3675   57899999999987543  3667776422   48888899986 7889999999998764

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.74  E-value=1.8e-05  Score=39.17  Aligned_cols=26  Identities=35%  Similarity=0.819  Sum_probs=21.7

Q ss_pred             eCCCCCCC--CCCCCCeeeecCCCeeEe
Q psy2856         105 DADECVNR--PCGKDALCSNVDGSYTCT  130 (136)
Q Consensus       105 ~~~~c~~~--~~~~~~~c~~~~g~~~c~  130 (136)
                      +|+||...  .|...+.|+|+.|+|.|.
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~   29 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHYGGYLCL   29 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETTCCEEEE
T ss_pred             ccccccCCCCCCCCCCEeECCCCCeEec
Confidence            67888754  576678999999999999

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=97.58  E-value=0.0001  Score=33.89  Aligned_cols=33  Identities=21%  Similarity=0.497  Sum_probs=28.6

Q ss_pred             CeeeecCCCeeeeCCCCceeCCCCcceeeCCCC
Q psy2856          77 ARCTNFPGGYHCECPPGYHGDAFTTGCVDADEC  109 (136)
Q Consensus        77 ~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c  109 (136)
                      ..|++..++|.|.|..||.+......|.+++|+
T Consensus        10 ~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~   42 (51)
T 1kig_L           10 QFCREERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             SCCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             CEeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence            468888999999999999987777779999876

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=97.52  E-value=0.00018  Score=33.39  Aligned_cols=34  Identities=26%  Similarity=0.504  Sum_probs=29.3

Q ss_pred             CeeeecCC-CeeeeCCCCceeCCCCcceeeCCCCC
Q psy2856          77 ARCTNFPG-GYHCECPPGYHGDAFTTGCVDADECV  110 (136)
Q Consensus        77 ~~c~~~~~-~~~c~c~~g~~~~~~~~~~~~~~~c~  110 (136)
                      ..|.+..+ +|.|.|..||.+......|.+++||.
T Consensus        11 ~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~   45 (53)
T 2bz6_L           11 QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   45 (53)
T ss_dssp             SEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             CEeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence            57888888 79999999999887777899999873

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=97.51  E-value=6.1e-05  Score=34.68  Aligned_cols=33  Identities=21%  Similarity=0.625  Sum_probs=26.0

Q ss_pred             CCeeeeCCCCeEeeCCCCCccCCC-CCcccCCcc
Q psy2856          32 NALCQNYPGNYTCSCQPGYTGNPF-EGCIDIDEC   64 (136)
Q Consensus        32 ~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~~~c   64 (136)
                      .+.|+|+.|+|.|.|.+||..... .+|.+++++
T Consensus         9 ~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~   42 (51)
T 1kig_L            9 DQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             SSCCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             CCEeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence            357999999999999999986533 567777665

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.48  E-value=0.00015  Score=32.41  Aligned_cols=28  Identities=25%  Similarity=0.510  Sum_probs=22.4

Q ss_pred             CCCCC---CCCCCCeee--ecCCCeeEeCCCCC
Q psy2856         108 ECVNR---PCGKDALCS--NVDGSYTCTCPPGF  135 (136)
Q Consensus       108 ~c~~~---~~~~~~~c~--~~~g~~~c~C~~g~  135 (136)
                      +|...   +|.+++.|+  +..++|.|.|++||
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~   34 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGY   34 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTE
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCC
Confidence            34444   788889998  67789999999998

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=97.33  E-value=0.00015  Score=33.64  Aligned_cols=34  Identities=24%  Similarity=0.545  Sum_probs=26.9

Q ss_pred             CCeeeeCCC-CeEeeCCCCCccCCC-CCcccCCccc
Q psy2856          32 NALCQNYPG-NYTCSCQPGYTGNPF-EGCIDIDECQ   65 (136)
Q Consensus        32 ~~~C~~~~g-~~~C~c~~g~~~~~~-~~c~~~~~c~   65 (136)
                      .+.|.++.+ +|.|.|.+||..... .+|.++++|.
T Consensus        10 ~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~   45 (53)
T 2bz6_L           10 EQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   45 (53)
T ss_dssp             SSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             CCEeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence            457999998 799999999986543 6688877763

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=97.32  E-value=0.0013  Score=34.58  Aligned_cols=65  Identities=23%  Similarity=0.455  Sum_probs=49.3

Q ss_pred             CCCCCCeeee-CCCCeEeeCCCCCccCCCCCcccCCc-ccCCCCCCCCCCCCeeeecC-CCeeeeCCCCce
Q psy2856          28 ACGVNALCQN-YPGNYTCSCQPGYTGNPFEGCIDIDE-CQYASTHPVCGPGARCTNFP-GGYHCECPPGYH   95 (136)
Q Consensus        28 ~~~~~~~C~~-~~g~~~C~c~~g~~~~~~~~c~~~~~-c~~~~~~~~c~~~~~c~~~~-~~~~c~c~~g~~   95 (136)
                      .|...+.|.. .+|...|.|..||++.. ..|.+.+. |....+  -|...+.|.... ....|.|..+|.
T Consensus        17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~dg-~~Cv~~Np~C~~nNG--GCd~nAeC~~~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           17 NVPENAACYRYLDGTEEWRCLLGFKEVG-GKCVPASITCEENNG--GCAPEAECTMDDKKEVECKCTKEGS   84 (105)
T ss_dssp             CCCTTEEEEECTTSCEEEEECTTEEECS-SSEEECCCCTTSGGG--GSCTTSEEEECTTSCEEEECCSTTC
T ss_pred             CCCCCCCeEECCCCCEeEEEECCeeccC-CEEEECCcchhhcCC--CcCCCcEeEECCCCEEEeECCCCCC
Confidence            4667889998 55888999999999875 45777777 654332  277888998775 677899998864

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.31  E-value=0.00013  Score=32.78  Aligned_cols=31  Identities=19%  Similarity=0.552  Sum_probs=23.5

Q ss_pred             eCCCCCC---CCCCCCCeeeecC--CCeeEeCCCCCC
Q psy2856         105 DADECVN---RPCGKDALCSNVD--GSYTCTCPPGFR  136 (136)
Q Consensus       105 ~~~~c~~---~~~~~~~~c~~~~--g~~~c~C~~g~~  136 (136)
                      ++++|.+   ..|.+ +.|+...  ++|.|.|++||.
T Consensus         2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~Gyt   37 (46)
T 1k36_A            2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYT   37 (46)
T ss_dssp             CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCS
T ss_pred             ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCc
Confidence            3456766   57877 7998754  689999999984

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=97.22  E-value=0.0061  Score=32.10  Aligned_cols=61  Identities=25%  Similarity=0.482  Sum_probs=47.0

Q ss_pred             CCCCCeeee-cCCCeeeeCCCCceeCCCCcceeeCCC-CCCC--CCCCCCeeeecC-CCeeEeCCCCC
Q psy2856          73 CGPGARCTN-FPGGYHCECPPGYHGDAFTTGCVDADE-CVNR--PCGKDALCSNVD-GSYTCTCPPGF  135 (136)
Q Consensus        73 c~~~~~c~~-~~~~~~c~c~~g~~~~~~~~~~~~~~~-c~~~--~~~~~~~c~~~~-g~~~c~C~~g~  135 (136)
                      |...+.|.. ..+...|+|..+|.+...  .|..++. |...  .|...+.|+.+. ....|.|..+|
T Consensus        18 Cp~NA~C~r~~~G~e~CrCl~gY~~dg~--~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~   83 (105)
T 1n1i_A           18 VPENAACYRYLDGTEEWRCLLGFKEVGG--KCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEG   83 (105)
T ss_dssp             CCTTEEEEECTTSCEEEEECTTEEECSS--SEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred             CCCCCCeEECCCCCEeEEEECCeeccCC--EEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCC
Confidence            556678877 567788999999998653  4777777 6544  688889999875 67889998876

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.19  E-value=0.00017  Score=33.44  Aligned_cols=31  Identities=26%  Similarity=0.701  Sum_probs=25.8

Q ss_pred             CCCCCCCCeee--eCCCCeEeeCCCCCccCCCC
Q psy2856          26 PNACGVNALCQ--NYPGNYTCSCQPGYTGNPFE   56 (136)
Q Consensus        26 ~~~~~~~~~C~--~~~g~~~C~c~~g~~~~~~~   56 (136)
                      .++|.++++|.  +..++|.|.|.+||.|..++
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce   43 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ   43 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCC
Confidence            36789999998  56788999999999998653

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=97.19  E-value=0.00067  Score=45.08  Aligned_cols=79  Identities=24%  Similarity=0.703  Sum_probs=50.4

Q ss_pred             EeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceee-------CCCCCC-CCC
Q psy2856          43 TCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVD-------ADECVN-RPC  114 (136)
Q Consensus        43 ~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~-------~~~c~~-~~~  114 (136)
                      .|.|..||.|..+.   .  .|.      +|.++..|..  ..+.|.|.+||.+..+...|.+       .++|.. ..|
T Consensus       186 ~c~C~~g~~G~~C~---~--~C~------~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C  252 (423)
T 2gy5_A          186 VRRCEAQKWGPECN---H--LCT------ACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGC  252 (423)
T ss_dssp             ECSSCTTEESTTSC---E--ECC------CCCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTT
T ss_pred             CCcCCCCCCCCCCC---C--CCC------CCCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCC
Confidence            46788888776542   1  231      2777778865  4568999999998876532211       013432 246


Q ss_pred             CCCCeeeecCCCeeEeCCCCCC
Q psy2856         115 GKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       115 ~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ...+.|.  .+.+.|.|++||.
T Consensus       253 ~~~g~C~--~~~~~C~C~~G~~  272 (423)
T 2gy5_A          253 KSYVFCL--PDPYGCSCATGWK  272 (423)
T ss_dssp             TTCCEEE--TTTTEEECCBTCB
T ss_pred             CCCCEEC--CCCCeEEeCCCcc
Confidence            6566774  5678999999983

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=97.08  E-value=0.00043  Score=48.58  Aligned_cols=93  Identities=29%  Similarity=0.695  Sum_probs=60.4

Q ss_pred             CCCCCCeeeeCCCCeEeeCC------CCCccCCCCCcccCCcccCCCCCCCCCC--CCeeeecCCCeeeeCCCCceeCCC
Q psy2856          28 ACGVNALCQNYPGNYTCSCQ------PGYTGNPFEGCIDIDECQYASTHPVCGP--GARCTNFPGGYHCECPPGYHGDAF   99 (136)
Q Consensus        28 ~~~~~~~C~~~~g~~~C~c~------~g~~~~~~~~c~~~~~c~~~~~~~~c~~--~~~c~~~~~~~~c~c~~g~~~~~~   99 (136)
                      +|.+++.|..  +  .|.|.      +||.|..++  .+...|.... ...|..  .+.|..  +  .|.|.+||.|..+
T Consensus       483 ~Cs~~G~C~~--G--~C~C~~~~~~~~G~~G~~Ce--~~~~~C~~~~-~~~C~~~~~G~C~~--g--~C~C~~G~~G~~C  551 (687)
T 3k6s_B          483 ICSGLGDCVC--G--QCLCHTSDVPGKLIYGQYCE--CDTINCERYN-GQVCGGPGRGLCFC--G--KCRCHPGFEGSAC  551 (687)
T ss_dssp             GGGSSEEEET--T--EEEECCCCSTTCCEESTTSC--EESSCSCEET-TEETSHHHHEEEET--T--EEEECTTCCSTTS
T ss_pred             cCCCCCEEeC--C--EEEcCCCCCCCCCccccccc--cccccccCCC-CcCcCCCCCCeEEC--C--EEEcCCCCcCCCC
Confidence            4777788873  2  89999      999998754  2344554311 012554  566753  2  7999999999876


Q ss_pred             CcceeeCCCCCCC---CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         100 TTGCVDADECVNR---PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       100 ~~~~~~~~~c~~~---~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      .. -.+.+.|...   .|..++.|..    ..|.|.+||.
T Consensus       552 ec-~~~~~~C~~~~g~~Cs~~G~C~~----g~C~C~~Gy~  586 (687)
T 3k6s_B          552 QC-ERTTEGCLNPRRVECSGRGRCRC----NVCECHSGYQ  586 (687)
T ss_dssp             CS-CCSSCTTBCTTCSBTSSSCCBCS----SCBCCSTTCC
T ss_pred             cc-CCCCCCCCCCCCCCCCCCCcCCC----CEEECCCCCc
Confidence            51 0134566643   5777788865    3699999984

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=97.07  E-value=0.0023  Score=30.27  Aligned_cols=33  Identities=24%  Similarity=0.438  Sum_probs=27.0

Q ss_pred             CCeeeecC-CCeeeeCCCCceeCCCCcceeeCCC
Q psy2856          76 GARCTNFP-GGYHCECPPGYHGDAFTTGCVDADE  108 (136)
Q Consensus        76 ~~~c~~~~-~~~~c~c~~g~~~~~~~~~~~~~~~  108 (136)
                      ...|++.. ++|.|.|..||.+......|.++++
T Consensus        10 ~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~   43 (59)
T 2wph_E           10 EQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVP   43 (59)
T ss_dssp             SSEEEECSTTCEEEECCTTEEECTTSSCEEESSS
T ss_pred             CCEeEeCCCCCEEeeCCCCcEECCCCCcccCCCC
Confidence            35788888 5999999999998877777887753

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=97.03  E-value=0.00054  Score=48.09  Aligned_cols=92  Identities=29%  Similarity=0.726  Sum_probs=56.9

Q ss_pred             CCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCC---------cccCCCCCCCCCCCCeeeecCCCeeeeCC------C
Q psy2856          28 ACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDID---------ECQYASTHPVCGPGARCTNFPGGYHCECP------P   92 (136)
Q Consensus        28 ~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~---------~c~~~~~~~~c~~~~~c~~~~~~~~c~c~------~   92 (136)
                      +|..++.|.    ...|.|.+||.|..++ | ..+         .|........|..++.|..  +  .|.|.      .
T Consensus       436 ~Cs~~G~C~----~g~C~C~~Gy~G~~Ce-c-~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~--G--~C~C~~~~~~~~  505 (687)
T 3k6s_B          436 LCHGKGFLE----CGICRCDTGYIGKNCE-C-QTQGRSSQELEGSCRKDNNSIICSGLGDCVC--G--QCLCHTSDVPGK  505 (687)
T ss_dssp             TGGGSEEES----SSSEEECSSEESTTSC-E-ESSSCCCSGGGSTTSSSTTSCGGGSSEEEET--T--EEEECCCCSTTC
T ss_pred             CCCCCCEEe----CCEeEcCCCCcCCccc-c-cCCcCCccccCCCCCCCCCCCcCCCCCEEeC--C--EEEcCCCCCCCC
Confidence            455555564    3479999999998764 1 111         3443221123666677762  2  89999      9


Q ss_pred             CceeCCCCcceeeCCCCCCC---CCCC--CCeeeecCCCeeEeCCCCCC
Q psy2856          93 GYHGDAFTTGCVDADECVNR---PCGK--DALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus        93 g~~~~~~~~~~~~~~~c~~~---~~~~--~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ||.|..+..   +...|...   .|..  ++.|..  +  .|.|.+||.
T Consensus       506 G~~G~~Ce~---~~~~C~~~~~~~C~~~~~G~C~~--g--~C~C~~G~~  547 (687)
T 3k6s_B          506 LIYGQYCEC---DTINCERYNGQVCGGPGRGLCFC--G--KCRCHPGFE  547 (687)
T ss_dssp             CEESTTSCE---ESSCSCEETTEETSHHHHEEEET--T--EEEECTTCC
T ss_pred             Ccccccccc---ccccccCCCCcCcCCCCCCeEEC--C--EEEcCCCCc
Confidence            999887642   44556532   4655  677763  2  799999884

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.03  E-value=0.00023  Score=34.27  Aligned_cols=30  Identities=30%  Similarity=0.635  Sum_probs=24.5

Q ss_pred             CCCCCCCCCCCCCeeee-----cCCCeeEeCCCCC
Q psy2856         106 ADECVNRPCGKDALCSN-----VDGSYTCTCPPGF  135 (136)
Q Consensus       106 ~~~c~~~~~~~~~~c~~-----~~g~~~c~C~~g~  135 (136)
                      .++|...+|.+++.|++     ..++|.|.|++||
T Consensus         6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf   40 (63)
T 1hae_A            6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGF   40 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTE
T ss_pred             cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCC
Confidence            35666678888899986     5688999999998

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=97.03  E-value=0.0024  Score=38.59  Aligned_cols=92  Identities=27%  Similarity=0.646  Sum_probs=56.8

Q ss_pred             CCCCCCeeeeCCCCeEeeCCCCCccCCCCCccc--------CCcccCCCCCCCCCCCCeeeecCCCeeeeCCCC------
Q psy2856          28 ACGVNALCQNYPGNYTCSCQPGYTGNPFEGCID--------IDECQYASTHPVCGPGARCTNFPGGYHCECPPG------   93 (136)
Q Consensus        28 ~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~--------~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g------   93 (136)
                      .|..++.|..    ..|.|.+||.|..++ |..        ...|.......+|...+.|..    ..|.|..|      
T Consensus        97 ~Csg~G~C~~----g~C~C~~G~~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~~  167 (217)
T 2p28_B           97 LCHGKGFLEC----GICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKL  167 (217)
T ss_dssp             TTTTSEEEET----TEEEECTTEESTTSC-EECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTCC
T ss_pred             ccCCCceEEC----CEEECCCCccCCccc-ccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCccc
Confidence            4666777763    489999999998764 211        012432211123655667762    37999999      


Q ss_pred             ceeCCCCcceeeCCCCCCC---CCCCC--CeeeecCCCeeEeCCCCC
Q psy2856          94 YHGDAFTTGCVDADECVNR---PCGKD--ALCSNVDGSYTCTCPPGF  135 (136)
Q Consensus        94 ~~~~~~~~~~~~~~~c~~~---~~~~~--~~c~~~~g~~~c~C~~g~  135 (136)
                      |.+..+..   ++..|...   .|..+  +.|..    ..|.|.+||
T Consensus       168 ~~G~~Ce~---~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~  207 (217)
T 2p28_B          168 IYGQYCEC---DTINCERYNGQVCGGPGRGLCFC----GKCRCHPGF  207 (217)
T ss_dssp             EESTTSCE---ESSCSCEETTEETTCTTTEEEET----TEEEECTTE
T ss_pred             EECCCccc---CCccCCCCCCCCCCCCCCcEEeC----CeeECCCCC
Confidence            57765531   34556543   46555  78873    279999988

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=96.97  E-value=0.0013  Score=34.40  Aligned_cols=66  Identities=23%  Similarity=0.531  Sum_probs=47.1

Q ss_pred             CCCCCCCeeeeC-CCCeEeeCCCCCccCCCCCcccC--CcccCCCCCCCCCCCCeeeecC-----CCeeeeCCCCce
Q psy2856          27 NACGVNALCQNY-PGNYTCSCQPGYTGNPFEGCIDI--DECQYASTHPVCGPGARCTNFP-----GGYHCECPPGYH   95 (136)
Q Consensus        27 ~~~~~~~~C~~~-~g~~~C~c~~g~~~~~~~~c~~~--~~c~~~~~~~~c~~~~~c~~~~-----~~~~c~c~~g~~   95 (136)
                      ..|...+.|.+. .+...|.|.+||++.. ..|.+.  ..|...++  -|...+.|....     +...|.|..++.
T Consensus        10 ~~C~~NA~C~r~~~g~e~C~C~~gy~gdg-~~Cv~~~~~sC~~nNG--GCd~nA~C~~~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C           10 KQCPQNSGCFRHLDEREECKCLLNYKQEG-DKCVENPNPTCNENNG--GCDADAKCTEEDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             CCCCTTEEEECCTTSCCEEEECTTEEEET-TEEEECSCCCSTTGGG--GCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred             CCCCCCCCeEEcCCCCEEEEecCCeecCC-CeEeeCCCCChhhcCC--CcCCCceeEecCCcccCCceEeEeCCCCc
Confidence            345678889885 5889999999999875 456665  46665332  277778887664     467899988864

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=96.82  E-value=0.00069  Score=32.13  Aligned_cols=22  Identities=27%  Similarity=0.829  Sum_probs=18.5

Q ss_pred             CCCCeeeecC-CCeeEeCCCCCC
Q psy2856         115 GKDALCSNVD-GSYTCTCPPGFR  136 (136)
Q Consensus       115 ~~~~~c~~~~-g~~~c~C~~g~~  136 (136)
                      ...+.|+++. |+|.|.|++||.
T Consensus         8 gC~~~C~n~~~gs~~C~C~~Gy~   30 (59)
T 2wph_E            8 RCEQFCKNSADNKVVCSCTEGYR   30 (59)
T ss_dssp             GCSSEEEECSTTCEEEECCTTEE
T ss_pred             CcCCEeEeCCCCCEEeeCCCCcE
Confidence            4568999998 699999999983

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=96.82  E-value=0.002  Score=37.28  Aligned_cols=37  Identities=35%  Similarity=0.793  Sum_probs=28.9

Q ss_pred             eeeeCCCCCCCCC----CCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          16 VFVDINECAHPNA----CGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        16 ~c~~~~~c~~~~~----~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      .+.++++|.....    |.  ..|.++.|+|.|.|.+||....
T Consensus       120 ~~~di~eC~~~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~~  160 (170)
T 1szb_A          120 AAEDIDECQVAPGEAPTCD--HHCHNHLGGFYCSCRAGYVLHR  160 (170)
T ss_dssp             EEEECCTTCCCTTSCCSSS--SEEEEETTEEEEECCTTEEECT
T ss_pred             eccccCcccCCCCCCCccC--CccccCCCCEEEeCCCCcEECC
Confidence            4678999985332    53  4899999999999999998643

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=96.77  E-value=0.0027  Score=36.25  Aligned_cols=39  Identities=38%  Similarity=0.756  Sum_probs=28.7

Q ss_pred             eeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          16 VFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        16 ~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      .+.++++|..+........|.+..+++.|.|.+||....
T Consensus       113 ~~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~  151 (159)
T 1nzi_A          113 VATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHD  151 (159)
T ss_dssp             EEEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECT
T ss_pred             ecccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECC
Confidence            456889998532212246899999999999999998653

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.77  E-value=0.00068  Score=38.86  Aligned_cols=41  Identities=34%  Similarity=0.815  Sum_probs=31.1

Q ss_pred             CCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCccc
Q psy2856          21 NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQ   65 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~   65 (136)
                      ++|. +.+|.+++.|.+..++|.|.|.+||.|..   |...++|.
T Consensus       120 ~~c~-~~~C~~~g~C~~~~~~~~c~C~~g~~G~~---Ce~~~~c~  160 (162)
T 1g1s_A          120 ASCQ-DMSCSKQGECLETIGNYTCSCYPGFYGPE---CEYVRDDD  160 (162)
T ss_dssp             CCCC-TTGGGGSEEEEECSSSEEEEECTTEESTT---SCEECC--
T ss_pred             CCCc-CCCCCCCCEEecCCCCceEeCCCCCcCcc---cccCcccC
Confidence            4565 36788889999999999999999999875   44444553

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.74  E-value=0.00088  Score=30.85  Aligned_cols=29  Identities=28%  Similarity=0.551  Sum_probs=23.9

Q ss_pred             CCCCCCCeeee----CCCCeEeeCCCCCccCCC
Q psy2856          27 NACGVNALCQN----YPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        27 ~~~~~~~~C~~----~~g~~~C~c~~g~~~~~~   55 (136)
                      ++|.+++.|.+    ..++|.|.|..||.|..+
T Consensus        14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~C   46 (52)
T 3ca7_A           14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRC   46 (52)
T ss_dssp             HTSCTTCEEEEEEETTEEEEEEECCTTEESTTS
T ss_pred             CcCCCCCEEecCccCCCCCEEEECCCCCcCCCC
Confidence            47888999986    346899999999999754

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=96.67  E-value=0.00099  Score=45.74  Aligned_cols=36  Identities=28%  Similarity=0.770  Sum_probs=31.6

Q ss_pred             CCCCCCCCCCCCCCeeee-CCCCeEeeCC-CCCccCCCC
Q psy2856          20 INECAHPNACGVNALCQN-YPGNYTCSCQ-PGYTGNPFE   56 (136)
Q Consensus        20 ~~~c~~~~~~~~~~~C~~-~~g~~~C~c~-~g~~~~~~~   56 (136)
                      +|+|.. +||.+++.|.+ ..++|.|.|. .||.|..++
T Consensus         2 ~d~C~~-~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce   39 (553)
T 1q4g_A            2 VNPCCY-YPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT   39 (553)
T ss_dssp             CCGGGG-CCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred             CCcCCC-CCCCCCCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence            477874 89999999999 8899999999 999998764

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=96.66  E-value=0.0081  Score=31.39  Aligned_cols=61  Identities=26%  Similarity=0.642  Sum_probs=45.1

Q ss_pred             CCCCCeeee-cCCCeeeeCCCCceeCCCCcceeeC--CCCCCC--CCCCCCeeeecC-----CCeeEeCCCCC
Q psy2856          73 CGPGARCTN-FPGGYHCECPPGYHGDAFTTGCVDA--DECVNR--PCGKDALCSNVD-----GSYTCTCPPGF  135 (136)
Q Consensus        73 c~~~~~c~~-~~~~~~c~c~~g~~~~~~~~~~~~~--~~c~~~--~~~~~~~c~~~~-----g~~~c~C~~g~  135 (136)
                      |...+.|.. ..+...|+|..||.+...  .|..+  ..|...  .|...+.|+...     +...|.|.+||
T Consensus        12 C~~NA~C~r~~~g~e~C~C~~gy~gdg~--~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~   82 (99)
T 1ob1_C           12 CPQNSGCFRHLDEREECKCLLNYKQEGD--KCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPD   82 (99)
T ss_dssp             CCTTEEEECCTTSCCEEEECTTEEEETT--EEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTT
T ss_pred             CCCCCCeEEcCCCCEEEEecCCeecCCC--eEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCC
Confidence            555677755 357788999999998653  46666  467654  588889998774     56889999886

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=96.56  E-value=0.0024  Score=36.93  Aligned_cols=33  Identities=36%  Similarity=0.777  Sum_probs=26.3

Q ss_pred             eeeCCCCCCCCCC---CCCeeeecCCCeeEeCCCCC
Q psy2856         103 CVDADECVNRPCG---KDALCSNVDGSYTCTCPPGF  135 (136)
Q Consensus       103 ~~~~~~c~~~~~~---~~~~c~~~~g~~~c~C~~g~  135 (136)
                      +.++++|......   +.+.|.++.|+|.|.|++||
T Consensus       121 ~~di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy  156 (170)
T 1szb_A          121 AEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGY  156 (170)
T ss_dssp             EEECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTE
T ss_pred             ccccCcccCCCCCCCccCCccccCCCCEEEeCCCCc
Confidence            5678899865421   44689999999999999998

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=96.46  E-value=0.0025  Score=44.06  Aligned_cols=36  Identities=28%  Similarity=0.705  Sum_probs=30.6

Q ss_pred             CCCCCCCCCCCCCCeeee-CCCCeEeeCC-CCCccCCCC
Q psy2856          20 INECAHPNACGVNALCQN-YPGNYTCSCQ-PGYTGNPFE   56 (136)
Q Consensus        20 ~~~c~~~~~~~~~~~C~~-~~g~~~C~c~-~g~~~~~~~   56 (136)
                      +|+|.. +||.+++.|.+ ..++|.|.|. +||.|..++
T Consensus         1 vd~C~s-~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce   38 (587)
T 3nt1_A            1 ANPCCS-NPCQNRGECMSTGFDQYKCDCTRTGFYGENCT   38 (587)
T ss_dssp             CCTTTT-CCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred             CCCCCC-CCCCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence            478885 89999999996 4589999999 999998764

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=96.37  E-value=0.0015  Score=40.87  Aligned_cols=46  Identities=24%  Similarity=0.714  Sum_probs=32.0

Q ss_pred             ccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCC
Q psy2856          59 IDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADE  108 (136)
Q Consensus        59 ~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~  108 (136)
                      .++++|....+  .|...+.|.+..++|.|.|..||.+...  .|.++++
T Consensus         3 ~DiDEC~~~~~--~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~--~C~d~d~   48 (285)
T 1gl4_A            3 LAQQTCANNRH--QCSVHAECRDYATGFCCRCVANYTGNGR--QCVAEGS   48 (285)
T ss_dssp             ----CHHHHGG--GSCTTEEEEECSSCEEEEECTTEEECSS--SEEETTC
T ss_pred             ccchhccCCCC--CCCCCCEeEcCCCCeEEEcCCCCCCCCC--cCCCCCC
Confidence            35667764221  3777789999999999999999997654  4777764

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=96.34  E-value=0.00059  Score=45.86  Aligned_cols=72  Identities=25%  Similarity=0.641  Sum_probs=29.4

Q ss_pred             EeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCeeee
Q psy2856          43 TCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSN  122 (136)
Q Consensus        43 ~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~~  122 (136)
                      ...|..+|.+..+.    ...|.. .    |.+ ..|..   ...|.|..||.+..+.     +++|.. .|.+++.|++
T Consensus       378 p~~C~~~~~g~~c~----~~~C~~-~----C~n-G~C~~---~~~C~C~~G~~G~~C~-----~~~C~~-~C~~~g~C~~  438 (463)
T 2wg3_C          378 PEECRATVQPAQTL----TSECSR-L----CRN-GYCTP---TGKCCCSPGWEGDFCR-----TAKCEP-ACRHGGVCVR  438 (463)
T ss_dssp             CGGGCCCCCCCCCC----CCHHHH-H----CCS-EEECT---TSCEEECTTEESTTSC-----EECC-------------
T ss_pred             cccCCCCCcCCCCc----cccccC-C----CCC-CccCC---CCeECCCCCcCCCcCC-----cCcCCC-CCCCCCEECC
Confidence            34566676665432    234542 2    654 57753   2479999999987652     345765 7777788875


Q ss_pred             cCCCeeEeCCCCCC
Q psy2856         123 VDGSYTCTCPPGFR  136 (136)
Q Consensus       123 ~~g~~~c~C~~g~~  136 (136)
                      .   +.|.|++||.
T Consensus       439 ~---~~C~C~~G~~  449 (463)
T 2wg3_C          439 P---NKCLCKKGYL  449 (463)
T ss_dssp             --------------
T ss_pred             C---CEEECCCCcc
Confidence            4   5899999984

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=95.95  E-value=0.0065  Score=38.08  Aligned_cols=47  Identities=32%  Similarity=0.675  Sum_probs=32.1

Q ss_pred             eCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCcccCCccc
Q psy2856          19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCIDIDECQ   65 (136)
Q Consensus        19 ~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~~~c~   65 (136)
                      ++|||...+.-.....|.++.++|.|.|..||..... ..|.+.++|.
T Consensus         1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~   48 (283)
T 3f1s_B            1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA   48 (283)
T ss_dssp             --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred             CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccccc
Confidence            4688975412233678999999999999999976543 5576655543

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=95.95  E-value=0.004  Score=40.22  Aligned_cols=40  Identities=35%  Similarity=0.852  Sum_probs=21.6

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCcccC
Q psy2856          20 INECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCIDI   61 (136)
Q Consensus        20 ~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~   61 (136)
                      +|||.....|  ...|.|+.|+|.|.|.+||..... ..|...
T Consensus         1 i~ec~~~~~C--~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~   41 (349)
T 3v64_C            1 VNECAEEGYC--SQGCTNSEGAFQCWCEAGYELRPDRRSCKAL   41 (349)
T ss_dssp             --------CC--SSEECCC---CCEECCTTEEECTTSSCEEES
T ss_pred             CcccCCCCCC--cCeeecCCCCeEEECCCCccCCCCCCccccc
Confidence            4778633345  568999999999999999986543 456543

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=95.91  E-value=0.0036  Score=29.51  Aligned_cols=28  Identities=29%  Similarity=0.613  Sum_probs=22.9

Q ss_pred             CCCCCCeeee----CCCCeEeeCCCCCccCCC
Q psy2856          28 ACGVNALCQN----YPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        28 ~~~~~~~C~~----~~g~~~C~c~~g~~~~~~   55 (136)
                      +|.+++.|..    ..+.|.|.|.+||.|..+
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~C   46 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRC   46 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSS
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCC
Confidence            7888999983    345789999999999765

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=95.53  E-value=0.019  Score=32.63  Aligned_cols=34  Identities=32%  Similarity=0.815  Sum_probs=25.9

Q ss_pred             eeeCCCCCCC-CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         103 CVDADECVNR-PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       103 ~~~~~~c~~~-~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      +.++++|... ...+.+.|.++.+++.|.|.+||.
T Consensus       114 ~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~  148 (159)
T 1nzi_A          114 ATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYF  148 (159)
T ss_dssp             EEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCE
T ss_pred             cccCcccCCCCCCCCCCcccCcCCCEEEecCCCcE
Confidence            4578889754 223457899999999999999983

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=95.47  E-value=0.0068  Score=34.65  Aligned_cols=35  Identities=29%  Similarity=0.767  Sum_probs=26.7

Q ss_pred             CCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCC
Q psy2856          73 CGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVN  111 (136)
Q Consensus        73 c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~  111 (136)
                      |...+.|.+..+.|.|.|.+||.|..    |..+++|..
T Consensus       127 C~~~g~C~~~~~~~~c~C~~g~~G~~----Ce~~~~c~~  161 (162)
T 1g1s_A          127 CSKQGECLETIGNYTCSCYPGFYGPE----CEYVRDDDD  161 (162)
T ss_dssp             GGGSEEEEECSSSEEEEECTTEESTT----SCEECC---
T ss_pred             CCCCCEEecCCCCceEeCCCCCcCcc----cccCcccCC
Confidence            77778899989999999999999865    556667753

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=95.42  E-value=0.0073  Score=27.84  Aligned_cols=24  Identities=29%  Similarity=0.804  Sum_probs=19.5

Q ss_pred             CCCCCCCeee--ecCCCeeEeCCCCC
Q psy2856         112 RPCGKDALCS--NVDGSYTCTCPPGF  135 (136)
Q Consensus       112 ~~~~~~~~c~--~~~g~~~c~C~~g~  135 (136)
                      ..|.+++.|+  +..++|.|.|++||
T Consensus        12 ~pC~nGG~C~~~~~~~~~~C~C~~Gy   37 (53)
T 1nql_B           12 GYCLHDGVCMYIEALDKYACNCVVGY   37 (53)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTE
T ss_pred             CCCCCCeEEeeecCCCCEEEecCCCC
Confidence            3577778997  56778999999997

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=94.98  E-value=0.036  Score=34.71  Aligned_cols=35  Identities=29%  Similarity=0.626  Sum_probs=28.9

Q ss_pred             CCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCC
Q psy2856          76 GARCTNFPGGYHCECPPGYHGDAFTTGCVDADECV  110 (136)
Q Consensus        76 ~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~  110 (136)
                      ...|.+..+++.|.|..||........|.+.++|.
T Consensus        14 ~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~   48 (283)
T 3f1s_B           14 QHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA   48 (283)
T ss_dssp             SSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred             CCEeeCCCCCeEecCCCCcccCCCCCccccccccc
Confidence            46888888999999999999877777788877664

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=94.68  E-value=0.0093  Score=40.18  Aligned_cols=55  Identities=29%  Similarity=0.783  Sum_probs=19.3

Q ss_pred             CCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCC
Q psy2856          29 CGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAF   99 (136)
Q Consensus        29 ~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~   99 (136)
                      |.+ +.|.+.   ..|.|.+||.+..+.    +..|.. +    |.++..|...   +.|.|..||.+..+
T Consensus       399 C~n-G~C~~~---~~C~C~~G~~G~~C~----~~~C~~-~----C~~~g~C~~~---~~C~C~~G~~G~~C  453 (463)
T 2wg3_C          399 CRN-GYCTPT---GKCCCSPGWEGDFCR----TAKCEP-A----CRHGGVCVRP---NKCLCKKGYLGPQC  453 (463)
T ss_dssp             CCS-EEECTT---SCEEECTTEESTTSC----EECC-----------------------------------
T ss_pred             CCC-CccCCC---CeECCCCCcCCCcCC----cCcCCC-C----CCCCCEECCC---CEEECCCCcccCCC
Confidence            554 678642   489999999997652    344643 3    7777788653   58999999988654

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=93.80  E-value=0.023  Score=38.87  Aligned_cols=51  Identities=25%  Similarity=0.484  Sum_probs=12.4

Q ss_pred             CeeeeCCCCceeCCCCcce--------eeCCCCCCCCCCCCCeeeec--CCCeeEeCCCCCC
Q psy2856          85 GYHCECPPGYHGDAFTTGC--------VDADECVNRPCGKDALCSNV--DGSYTCTCPPGFR  136 (136)
Q Consensus        85 ~~~c~c~~g~~~~~~~~~~--------~~~~~c~~~~~~~~~~c~~~--~g~~~c~C~~g~~  136 (136)
                      ...|.|..+|.+..+.. |        .++++|.+-.|...+.+...  .....|.|++||.
T Consensus       459 tg~C~C~~g~~G~~Ce~-C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~  519 (525)
T 4aqs_A          459 TGYCYCKRLVTGQRCDQ-CLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMI  519 (525)
T ss_dssp             TCCBCBCTTCCSTTTCC---------------------------------------------
T ss_pred             CCEEECCCCCcCCCccc-CCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCc
Confidence            34689999998876642 2        13445654455444433322  2234799999984

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=93.67  E-value=0.072  Score=30.39  Aligned_cols=29  Identities=34%  Similarity=0.774  Sum_probs=25.6

Q ss_pred             CCCCCCCeeeeCCCCeEeeCCCCCccCCC
Q psy2856          27 NACGVNALCQNYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        27 ~~~~~~~~C~~~~g~~~C~c~~g~~~~~~   55 (136)
                      .+|...+.|.+..++|.|.|.+||.|..+
T Consensus       125 ~~C~~~g~C~~~~~~~~c~C~~g~~g~~C  153 (164)
T 3cfw_A          125 WSCSGHGECVEIINNYTCNCDVGYYGPQC  153 (164)
T ss_dssp             TSSCSSEEEEEETTEEEEEECTTCBSSSS
T ss_pred             CcCCCCCeecccCCCceeeeCCCcccccc
Confidence            67888899999999999999999998753

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=93.16  E-value=0.1  Score=28.43  Aligned_cols=29  Identities=24%  Similarity=0.554  Sum_probs=23.5

Q ss_pred             CCCCCCeeeeCC--CCe-EeeCCCCCccCCCC
Q psy2856          28 ACGVNALCQNYP--GNY-TCSCQPGYTGNPFE   56 (136)
Q Consensus        28 ~~~~~~~C~~~~--g~~-~C~c~~g~~~~~~~   56 (136)
                      +|.+++.|++..  ..+ .|.|.+||.|..++
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce   33 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE   33 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEESTTSC
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCcccc
Confidence            578889998874  556 99999999997654

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=92.99  E-value=0.039  Score=31.20  Aligned_cols=34  Identities=32%  Similarity=0.882  Sum_probs=27.4

Q ss_pred             CCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC
Q psy2856          21 NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~   55 (136)
                      ++|.. .+|.+.+.|.+....|.|.|.+||.|..+
T Consensus       120 ~~~~~-~pc~~~g~C~~~~~~~~c~C~~g~~g~~C  153 (157)
T 1g1t_A          120 AACTN-TSCSGHGECVETINNYTCKCDPGFSGLKC  153 (157)
T ss_dssp             CCCCT-TGGGGSEEEEEETTEEEEEECTTEESTTS
T ss_pred             CCCCC-CCCCCCCEeecCCCCeeEECCCCccCccc
Confidence            44543 57777899999999999999999998754

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=92.92  E-value=0.1  Score=36.04  Aligned_cols=36  Identities=31%  Similarity=0.798  Sum_probs=29.6

Q ss_pred             CCcccCCCCCCCCCCCCeeee-cCCCeeeeCC-CCceeCCCC
Q psy2856          61 IDECQYASTHPVCGPGARCTN-FPGGYHCECP-PGYHGDAFT  100 (136)
Q Consensus        61 ~~~c~~~~~~~~c~~~~~c~~-~~~~~~c~c~-~g~~~~~~~  100 (136)
                      +++|...+    |.+++.|.. ..+.|.|.|. .||.|..+.
T Consensus         2 ~d~C~~~P----C~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce   39 (553)
T 1q4g_A            2 VNPCCYYP----CQHQGICVRFGLDRYQCDCTRTGYSGPNCT   39 (553)
T ss_dssp             CCGGGGCC----CCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred             CCcCCCCC----CCCCCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence            35676655    999999998 7889999999 999998764

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=92.78  E-value=0.15  Score=33.67  Aligned_cols=35  Identities=17%  Similarity=0.650  Sum_probs=29.5

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeEeeCCC-CCccCCC
Q psy2856          20 INECAHPNACGVNALCQNYPGNYTCSCQP-GYTGNPF   55 (136)
Q Consensus        20 ~~~c~~~~~~~~~~~C~~~~g~~~C~c~~-g~~~~~~   55 (136)
                      .+.|.. ++|.+++.|.+..+.|.|.|.. +|.|..+
T Consensus       185 ~~~C~~-~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C  220 (410)
T 3asi_A          185 STTCQE-DSCSNQGVCLQQWDGFSCDCSMTSFSGPLC  220 (410)
T ss_dssp             SSCCCT-TSSSTTCEEEECSSSEEEECTTTSEESTTS
T ss_pred             CCCccc-ccCCCCCEecCCCCCceEeccCCcccCCCC
Confidence            466764 8999999999999999999996 8887654

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=92.71  E-value=0.047  Score=36.34  Aligned_cols=27  Identities=26%  Similarity=0.587  Sum_probs=19.6

Q ss_pred             CeeeeCCCCeEeeCCCCCccCCCCCcc
Q psy2856          33 ALCQNYPGNYTCSCQPGYTGNPFEGCI   59 (136)
Q Consensus        33 ~~C~~~~g~~~C~c~~g~~~~~~~~c~   59 (136)
                      ..|....+.+.|.|..++.|..++.|.
T Consensus       304 s~C~~~~g~~~C~C~~~ttG~~CE~C~  330 (426)
T 3zyj_B          304 TVCVYDNSKLTCECEHNTTGPDCGKCK  330 (426)
T ss_dssp             SCEEEETTEEEECCCTTEESSSSCEEC
T ss_pred             hhcCCCCCCceeeCCCCCcCCCccccc
Confidence            568777777889988888876655443

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=92.58  E-value=0.12  Score=33.28  Aligned_cols=32  Identities=28%  Similarity=0.624  Sum_probs=23.0

Q ss_pred             CCeeeecCCCeeeeCCCCceeCCCCcceeeCC
Q psy2856          76 GARCTNFPGGYHCECPPGYHGDAFTTGCVDAD  107 (136)
Q Consensus        76 ~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~  107 (136)
                      ...|.+..++|.|.|.+||...+....|...+
T Consensus        11 ~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~   42 (349)
T 3v64_C           11 SQGCTNSEGAFQCWCEAGYELRPDRRSCKALG   42 (349)
T ss_dssp             SSEECCC---CCEECCTTEEECTTSSCEEESS
T ss_pred             cCeeecCCCCeEEECCCCccCCCCCCcccccc
Confidence            35898899999999999999876666676554

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=91.78  E-value=0.11  Score=36.41  Aligned_cols=31  Identities=29%  Similarity=0.738  Sum_probs=25.7

Q ss_pred             eCCCCCCCCCCCCCeeeecC-CCeeEeCCCCC
Q psy2856         105 DADECVNRPCGKDALCSNVD-GSYTCTCPPGF  135 (136)
Q Consensus       105 ~~~~c~~~~~~~~~~c~~~~-g~~~c~C~~g~  135 (136)
                      .+++|......+++.|.+.. ++|.|.|+.||
T Consensus       264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~  295 (628)
T 4a0p_A          264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHY  295 (628)
T ss_dssp             CCCTTTTTGGGCSSEEEEETTTEEEEECSTTC
T ss_pred             cceEeccCCCCcchhhhcCCCCCeeEEcCCCc
Confidence            46778766556779999998 99999999998

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=91.57  E-value=0.87  Score=24.75  Aligned_cols=28  Identities=25%  Similarity=0.719  Sum_probs=21.0

Q ss_pred             CCCCCeeeecC--CCe-eeeCCCCceeCCCC
Q psy2856          73 CGPGARCTNFP--GGY-HCECPPGYHGDAFT  100 (136)
Q Consensus        73 c~~~~~c~~~~--~~~-~c~c~~g~~~~~~~  100 (136)
                      |.++..|+...  ..+ .|.|..+|.+..+.
T Consensus         3 C~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce   33 (122)
T 2fd6_A            3 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE   33 (122)
T ss_dssp             CCSSCEEEECTTTTTCEEEECCTTEESTTSC
T ss_pred             CCCcCCcCCCcccCCCCCccCCCCCCCcccc
Confidence            67778887763  445 89999999887654

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=91.42  E-value=0.38  Score=21.77  Aligned_cols=37  Identities=30%  Similarity=0.530  Sum_probs=25.6

Q ss_pred             eeCCCCCC--CCCCCCCCeee--eCCCCeEeeCCCCCccCCC
Q psy2856          18 VDINECAH--PNACGVNALCQ--NYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        18 ~~~~~c~~--~~~~~~~~~C~--~~~g~~~C~c~~g~~~~~~   55 (136)
                      ...++|..  .+.|.+ +.|.  ...+.+.|.|..||.|..+
T Consensus         7 ~~~~~C~~~~~~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RC   47 (50)
T 2rnl_A            7 GKKNPCNAEFQNFCIH-GECKYIEHLEAVTCKCQQEYFGERC   47 (50)
T ss_dssp             SCCCTTTTTGGGTCSS-SEEEEETTTTEEEEECCSSCCSSSC
T ss_pred             CcCcccCchhhCcCCC-CEEEEecCCCCeeEECCCCcccccc
Confidence            34566753  246776 5897  3456789999999998754

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=90.96  E-value=0.25  Score=34.47  Aligned_cols=35  Identities=26%  Similarity=0.713  Sum_probs=27.5

Q ss_pred             CcccCCCCCCCCCCCCeeee-cCCCeeeeCC-CCceeCCCC
Q psy2856          62 DECQYASTHPVCGPGARCTN-FPGGYHCECP-PGYHGDAFT  100 (136)
Q Consensus        62 ~~c~~~~~~~~c~~~~~c~~-~~~~~~c~c~-~g~~~~~~~  100 (136)
                      ++|...+    |.+++.|.. ..+.|.|.|. .||.|..+.
T Consensus         2 d~C~s~P----C~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce   38 (587)
T 3nt1_A            2 NPCCSNP----CQNRGECMSTGFDQYKCDCTRTGFYGENCT   38 (587)
T ss_dssp             CTTTTCC----CCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred             CCCCCCC----CCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence            4566544    999999985 4578999999 999987764

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=90.66  E-value=0.21  Score=31.70  Aligned_cols=32  Identities=28%  Similarity=0.645  Sum_probs=23.6

Q ss_pred             eCCCCCCC---CCCCCCeeeecC------CCeeEeCCCCCC
Q psy2856         105 DADECVNR---PCGKDALCSNVD------GSYTCTCPPGFR  136 (136)
Q Consensus       105 ~~~~c~~~---~~~~~~~c~~~~------g~~~c~C~~g~~  136 (136)
                      ..++|...   ...+++.|.+++      ++|.|.|+.||+
T Consensus       266 ~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~  306 (316)
T 1ijq_A          266 GVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGML  306 (316)
T ss_dssp             CCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCE
T ss_pred             ccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCE
Confidence            45677755   445678999875      579999999973

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=90.65  E-value=0.15  Score=25.50  Aligned_cols=35  Identities=26%  Similarity=0.641  Sum_probs=23.3

Q ss_pred             CCCCCC--CCCCCCCCeeeeC--CCCeEeeCCCCCccCCC
Q psy2856          20 INECAH--PNACGVNALCQNY--PGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        20 ~~~c~~--~~~~~~~~~C~~~--~g~~~C~c~~g~~~~~~   55 (136)
                      .++|..  .+.|.++ .|...  .+.+.|.|.+||.|..+
T Consensus        37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RC   75 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERC   75 (79)
T ss_dssp             --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTC
T ss_pred             CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCcccccc
Confidence            456652  2568775 89533  35789999999999754

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=90.03  E-value=0.28  Score=22.14  Aligned_cols=28  Identities=25%  Similarity=0.589  Sum_probs=21.3

Q ss_pred             CCCCCCCeee--eCCCCeEeeCCCCCccCCC
Q psy2856          27 NACGVNALCQ--NYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        27 ~~~~~~~~C~--~~~g~~~C~c~~g~~~~~~   55 (136)
                      +.|.+ +.|.  ...+.+.|.|..||.|..+
T Consensus        14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RC   43 (50)
T 1iox_A           14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARC   43 (50)
T ss_dssp             TSCTT-CCEEEETTTTEEEECCCTTEETTTT
T ss_pred             CcccC-CEEEeEcCCCCeEEECCCCcccCCC
Confidence            46777 6885  3446789999999999764

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=89.64  E-value=0.54  Score=21.26  Aligned_cols=28  Identities=25%  Similarity=0.622  Sum_probs=21.5

Q ss_pred             CCCCCCCeeeeC--CCCeEeeCCCCCccCCC
Q psy2856          27 NACGVNALCQNY--PGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        27 ~~~~~~~~C~~~--~g~~~C~c~~g~~~~~~   55 (136)
                      ..|.++ .|...  .+.+.|.|.+||.|..+
T Consensus        14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RC   43 (50)
T 3e50_C           14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARC   43 (50)
T ss_pred             CcccCC-EEeeccCCCCeEEECCCCCcccCC
Confidence            467765 88753  36789999999999764

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=89.54  E-value=0.17  Score=34.63  Aligned_cols=54  Identities=26%  Similarity=0.591  Sum_probs=13.5

Q ss_pred             CeEeeCCCCCccCCCCCccc--------CCcccCCCCCCCCCCCCeeeec--CCCeeeeCCCCceeCC
Q psy2856          41 NYTCSCQPGYTGNPFEGCID--------IDECQYASTHPVCGPGARCTNF--PGGYHCECPPGYHGDA   98 (136)
Q Consensus        41 ~~~C~c~~g~~~~~~~~c~~--------~~~c~~~~~~~~c~~~~~c~~~--~~~~~c~c~~g~~~~~   98 (136)
                      .+.|.|++||.|..++.|.+        .+.|..-.    |.....+...  .....|.|.+||.|..
T Consensus       459 tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~----C~~~gs~~~~C~~~tG~C~C~~G~~G~~  522 (525)
T 4aqs_A          459 TGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCD----CDLGGALNNSCSEDSGQCSCLPHMIGRQ  522 (525)
T ss_dssp             TCCBCBCTTCCSTTTCC---------------------------------------------------
T ss_pred             CCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCC----CCCCCccCCccCCCCCeeECCCCCcCCC
Confidence            45799999999987654432        22232211    3332222211  1234688999988754

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=89.21  E-value=0.37  Score=30.71  Aligned_cols=31  Identities=29%  Similarity=0.644  Sum_probs=23.0

Q ss_pred             CCCCCCCCCCCCCeeeecCC--CeeEeCCCCCC
Q psy2856         106 ADECVNRPCGKDALCSNVDG--SYTCTCPPGFR  136 (136)
Q Consensus       106 ~~~c~~~~~~~~~~c~~~~g--~~~c~C~~g~~  136 (136)
                      .++|......+++.|...++  +|.|.|+.||+
T Consensus       267 ~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~  299 (318)
T 3sov_A          267 TNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVK  299 (318)
T ss_dssp             CCTTTTTGGGCSSEEEECSSTTSEEEECSTTCC
T ss_pred             ccccccCCCCcceEEecCCCCCCeEEECCCCCE
Confidence            34566554556789998765  69999999974

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=89.16  E-value=0.26  Score=27.99  Aligned_cols=28  Identities=29%  Similarity=0.833  Sum_probs=23.5

Q ss_pred             CCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         109 CVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       109 c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      |....|...+.|.+..++|.|.|.+||.
T Consensus       122 ~~~~~C~~~g~C~~~~~~~~c~C~~g~~  149 (164)
T 3cfw_A          122 CQPWSCSGHGECVEIINNYTCNCDVGYY  149 (164)
T ss_dssp             CCTTSSCSSEEEEEETTEEEEEECTTCB
T ss_pred             CCCCcCCCCCeecccCCCceeeeCCCcc
Confidence            5555777789999999999999999983

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=88.90  E-value=0.35  Score=33.96  Aligned_cols=41  Identities=34%  Similarity=0.734  Sum_probs=29.2

Q ss_pred             eCCCCCCCCCCCCCCeeeeCC-CCeEeeCCCCCccCCC-CCccc
Q psy2856          19 DINECAHPNACGVNALCQNYP-GNYTCSCQPGYTGNPF-EGCID   60 (136)
Q Consensus        19 ~~~~c~~~~~~~~~~~C~~~~-g~~~C~c~~g~~~~~~-~~c~~   60 (136)
                      ++|+|...+. .....|.+.+ ++|.|.|..||..... ..|.+
T Consensus       264 ~~n~C~~~ng-~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~  306 (628)
T 4a0p_A          264 GWNECASSNG-HCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA  306 (628)
T ss_dssp             CCCTTTTTGG-GCSSEEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred             cceEeccCCC-CcchhhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence            5788875331 3357899998 9999999999976533 44543

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=88.88  E-value=0.17  Score=35.48  Aligned_cols=30  Identities=30%  Similarity=0.744  Sum_probs=23.3

Q ss_pred             CCCCCCCCCCCCCeeeecCCCeeEeCCCCC
Q psy2856         106 ADECVNRPCGKDALCSNVDGSYTCTCPPGF  135 (136)
Q Consensus       106 ~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~  135 (136)
                      .++|......+++.|.++++++.|.|+.||
T Consensus       578 ~~~C~~~ng~C~~~C~~~~~~~~C~C~~g~  607 (619)
T 3s94_A          578 SNPCAEENGGCSHLCLYRPQGLRCACPIGF  607 (619)
T ss_dssp             CCGGGSGGGGCSSEEEEETTEEEEECCTTC
T ss_pred             cccCCCCCCChhHhhccCCCCeEEECCCCC
Confidence            456665555667899999988999999887

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=88.55  E-value=0.32  Score=29.42  Aligned_cols=62  Identities=29%  Similarity=0.592  Sum_probs=38.7

Q ss_pred             CCCCCCCeeeeCCCCeEeeCCCC------CccCCCCCcccCCcccCCCCCCCCCCC--CeeeecCCCeeeeCCCCceeCC
Q psy2856          27 NACGVNALCQNYPGNYTCSCQPG------YTGNPFEGCIDIDECQYASTHPVCGPG--ARCTNFPGGYHCECPPGYHGDA   98 (136)
Q Consensus        27 ~~~~~~~~C~~~~g~~~C~c~~g------~~~~~~~~c~~~~~c~~~~~~~~c~~~--~~c~~~~~~~~c~c~~g~~~~~   98 (136)
                      .+|..++.|..    ..|.|.+|      |.|..++  .+...|..... .+|...  +.|..    ..|.|..||.+..
T Consensus       143 ~~Csg~G~C~~----g~C~C~~gw~~~~~~~G~~Ce--~~~~~C~~~~g-~~C~~~~~G~C~~----g~C~C~~G~~G~~  211 (217)
T 2p28_B          143 IICSGLGDCVC----GQCLCHTSDVPGKLIYGQYCE--CDTINCERYNG-QVCGGPGRGLCFC----GKCRCHPGFEGSA  211 (217)
T ss_dssp             CBGGGTEEEET----TEEEECCCCSTTCCEESTTSC--EESSCSCEETT-EETTCTTTEEEET----TEEEECTTEESTT
T ss_pred             CCCCCCCEEeC----CceECCCCCCCcccEECCCcc--cCCccCCCCCC-CCCCCCCCcEEeC----CeeECCCCCccCC
Confidence            45766778863    37999999      5666543  23344543210 125544  67763    2899999999875


Q ss_pred             C
Q psy2856          99 F   99 (136)
Q Consensus        99 ~   99 (136)
                      +
T Consensus       212 C  212 (217)
T 2p28_B          212 C  212 (217)
T ss_dssp             S
T ss_pred             c
Confidence            4

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=87.33  E-value=0.7  Score=29.26  Aligned_cols=34  Identities=32%  Similarity=0.756  Sum_probs=24.2

Q ss_pred             eCCCCCCC---C-CCCCCCeeeeCC------CCeEeeCCCCCccCC
Q psy2856          19 DINECAHP---N-ACGVNALCQNYP------GNYTCSCQPGYTGNP   54 (136)
Q Consensus        19 ~~~~c~~~---~-~~~~~~~C~~~~------g~~~C~c~~g~~~~~   54 (136)
                      +.++|...   + .|  .+.|++.+      ++|.|.|+.||....
T Consensus       266 ~~n~C~~~~~~ng~C--s~~C~~~p~~~~~~~~~~C~C~~g~~l~~  309 (316)
T 1ijq_A          266 GVNWCERTTLSNGGC--QYLCLPAPQINPHSPKFTCACPDGMLLAR  309 (316)
T ss_dssp             CCCTTSSSSSGGGGC--SSEEEECCCCSTTCCSEEEECCTTCEECT
T ss_pred             ccccccccccCCCCc--CcccCCCccccCCCCCeEeeCCCCCEECC
Confidence            56777642   2 34  46898875      589999999997653

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=87.28  E-value=0.64  Score=30.71  Aligned_cols=30  Identities=20%  Similarity=0.742  Sum_probs=25.6

Q ss_pred             CCCCCCCCCCCCCeeeecCCCeeEeCCC-CC
Q psy2856         106 ADECVNRPCGKDALCSNVDGSYTCTCPP-GF  135 (136)
Q Consensus       106 ~~~c~~~~~~~~~~c~~~~g~~~c~C~~-g~  135 (136)
                      .+.|...+|.+++.|+....+|.|.|+. +|
T Consensus       185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~  215 (410)
T 3asi_A          185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSF  215 (410)
T ss_dssp             SSCCCTTSSSTTCEEEECSSSEEEECTTTSE
T ss_pred             CCCcccccCCCCCEecCCCCCceEeccCCcc
Confidence            3578888899999999999999999985 55

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=86.83  E-value=0.66  Score=35.36  Aligned_cols=35  Identities=17%  Similarity=0.674  Sum_probs=29.9

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeEeeCC-CCCccCCC
Q psy2856          20 INECAHPNACGVNALCQNYPGNYTCSCQ-PGYTGNPF   55 (136)
Q Consensus        20 ~~~c~~~~~~~~~~~C~~~~g~~~C~c~-~g~~~~~~   55 (136)
                      .+.|.. ++|.+++.|.....+|.|.|. ++|.|..+
T Consensus      1017 ~~~C~~-~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C 1052 (1245)
T 3qcw_A         1017 STTCQE-DSCSNQGVCLQQWDGFSCDCSMTSFSGPLC 1052 (1245)
T ss_dssp             CCCCCT-TSSSSSCEEEEETTEEEEECTTSSCBSTTS
T ss_pred             cCceEC-CcCCCCCEeCCCCCCCEEECCCCCCCCCCc
Confidence            356764 899999999999999999999 69998765

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=85.99  E-value=2.4  Score=21.89  Aligned_cols=65  Identities=22%  Similarity=0.472  Sum_probs=44.7

Q ss_pred             CCCCCCeeeeCC-CCeEeeCCCCCccCCCCCcccCC--cccCCCCCCCCCCCCeeeecC-CCeeeeCCCCce
Q psy2856          28 ACGVNALCQNYP-GNYTCSCQPGYTGNPFEGCIDID--ECQYASTHPVCGPGARCTNFP-GGYHCECPPGYH   95 (136)
Q Consensus        28 ~~~~~~~C~~~~-g~~~C~c~~g~~~~~~~~c~~~~--~c~~~~~~~~c~~~~~c~~~~-~~~~c~c~~g~~   95 (136)
                      -|...+.|.... +.-.|+|..+|+-.. ..|...+  .|....+.  |...+.|.... ....|.|...+.
T Consensus        11 kcp~NA~Cyr~~dg~EecRCllnykk~~-~kCV~~~~~~C~~NNGG--Cd~nA~C~~~~~~kIvC~C~~~~~   79 (95)
T 1b9w_A           11 NVPENAACYRYLDGTEEWRCLLYFKEDA-GKCVPAPNMTCKDKNGG--CAPEAECKMNDKNEIVCKCTKEGS   79 (95)
T ss_dssp             CCCTTEEEEECTTSCEEEEECTTEEEET-TEEEECTTCCTTTGGGG--SCTTSEEEECTTSCEEEECCSTTE
T ss_pred             CCCCCcCeEEEcCCCEEEEEECCeEecC-CEEEcCCCCCccccCCC--cCCCcceeecCCCcEEEECCCCCC
Confidence            467788999875 678999999997643 3455443  45544432  67778887666 567788877654

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=85.97  E-value=0.21  Score=28.13  Aligned_cols=29  Identities=38%  Similarity=0.998  Sum_probs=23.6

Q ss_pred             CCCCCCCCCCCCeeeecCCCeeEeCCCCC
Q psy2856         107 DECVNRPCGKDALCSNVDGSYTCTCPPGF  135 (136)
Q Consensus       107 ~~c~~~~~~~~~~c~~~~g~~~c~C~~g~  135 (136)
                      ++|...+|...+.|.+..+.|.|.|.+||
T Consensus       120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~  148 (157)
T 1g1t_A          120 AACTNTSCSGHGECVETINNYTCKCDPGF  148 (157)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTE
T ss_pred             CCCCCCCCCCCCEeecCCCCeeEECCCCc
Confidence            44555567667899999999999999987

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=85.86  E-value=0.95  Score=26.67  Aligned_cols=26  Identities=23%  Similarity=0.777  Sum_probs=21.2

Q ss_pred             CCCCCCCeeeeCCCCeEeeCCCCCccCCC
Q psy2856          27 NACGVNALCQNYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        27 ~~~~~~~~C~~~~g~~~C~c~~g~~~~~~   55 (136)
                      .+|.+++.|..   ...|.|+.||.|..+
T Consensus       153 ~~C~ngG~Cv~---P~~C~C~~Gw~G~~C  178 (188)
T 2ygo_A          153 GGCRNGGFCNE---RRICECPDGFHGPHC  178 (188)
T ss_dssp             TCCCTTCEECT---TSCEECCTTCBTTTT
T ss_pred             CCCCCCCEeCC---CCcccCcCCCCCCCC
Confidence            47888999954   458999999999765

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=84.21  E-value=1.5  Score=27.86  Aligned_cols=33  Identities=33%  Similarity=0.689  Sum_probs=23.3

Q ss_pred             CCCCCCCC-CCCCCCeeeeCCC--CeEeeCCCCCccCC
Q psy2856          20 INECAHPN-ACGVNALCQNYPG--NYTCSCQPGYTGNP   54 (136)
Q Consensus        20 ~~~c~~~~-~~~~~~~C~~~~g--~~~C~c~~g~~~~~   54 (136)
                      .++|...+ .|  ...|...++  +|.|.|+.||....
T Consensus       267 ~n~C~~~ng~C--s~~C~~~~~~~~~~C~C~~g~~l~~  302 (318)
T 3sov_A          267 TNPCGIDNGGC--SHLCLMSPVKPFYQCACPTGVKLLE  302 (318)
T ss_dssp             CCTTTTTGGGC--SSEEEECSSTTSEEEECSTTCCBCT
T ss_pred             ccccccCCCCc--ceEEecCCCCCCeEEECCCCCEECC
Confidence            46665422 34  568988775  69999999997754

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=83.59  E-value=0.91  Score=34.63  Aligned_cols=35  Identities=31%  Similarity=0.835  Sum_probs=29.3

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeEeeCC-CCCccCCC
Q psy2856          20 INECAHPNACGVNALCQNYPGNYTCSCQ-PGYTGNPF   55 (136)
Q Consensus        20 ~~~c~~~~~~~~~~~C~~~~g~~~C~c~-~g~~~~~~   55 (136)
                      .+.|. ++||.+++.|.+....|.|.|. .||.|..+
T Consensus       619 ~~~C~-~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C  654 (1245)
T 3qcw_A          619 AKPCL-SNPCKNNGMCRDGWNRYVCDCSGTGYLGRSC  654 (1245)
T ss_dssp             SCGGG-SCCCCTTCEEEECSSSEEEECTTTTEESTTS
T ss_pred             CCCCC-ccCCCCCCEEeCCCCCeEEECCCCCcccccC
Confidence            35665 4799999999999999999999 79988765

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=82.15  E-value=1.7  Score=24.47  Aligned_cols=29  Identities=24%  Similarity=0.517  Sum_probs=23.1

Q ss_pred             CCCCCCeeeeC--CCCe-EeeCCCCCccCCCC
Q psy2856          28 ACGVNALCQNY--PGNY-TCSCQPGYTGNPFE   56 (136)
Q Consensus        28 ~~~~~~~C~~~--~g~~-~C~c~~g~~~~~~~   56 (136)
                      +|.+++.|+..  ...+ .|.|..||.|..++
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Ce   45 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE   45 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCCcee
Confidence            78999999875  2455 89999999997653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	136
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	2e-06
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	3e-06
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	2e-05
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	3e-06
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	4e-05
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	0.004
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	9e-06
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	1e-05
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	0.002
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	2e-05
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	3e-05
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	0.004
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	2e-05
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	1e-04
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	0.002
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	2e-05
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	7e-05
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	8e-04
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	3e-05
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	2e-04
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	0.002
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	8e-05
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	0.004
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	9e-05
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	1e-04
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	2e-04
d1i0ua2	41	g.3.11.1 (A:42-82) Low density lipoprotein (LDL) r	2e-04
d1i0ua2	41	g.3.11.1 (A:42-82) Low density lipoprotein (LDL) r	0.004
d1szba2	45	g.3.11.1 (A:124-168) Mannose-binding protein assoc	2e-04
d1szba2	45	g.3.11.1 (A:124-168) Mannose-binding protein assoc	0.001
d1gl4a2	40	g.3.11.5 (A:359-398) EGF-like domain of nidogen-1	4e-04
d1gl4a2	40	g.3.11.5 (A:359-398) EGF-like domain of nidogen-1	8e-04
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	5e-04
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	5e-04
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	0.002
d1kigl_	51	g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bo	0.001
d1xkba1	39	g.3.11.1 (A:48-86) Factor X, N-terminal module {Hu	0.001
d3bpse1	40	g.3.11.1 (E:293-332) Low density lipoprotein (LDL)	0.001
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	0.001
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	0.001
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	0.004
d1nzia2	42	g.3.11.1 (A:118-159) Complement C1S component {Hum	0.001
d2vj3a3	35	g.3.11.1 (A:492-526) Neurogenic locus notch homolo	0.002
d2p3ua1	51	g.3.11.1 (A:87-137) Factor X, N-terminal module {H	0.003
d1nt0a3	45	g.3.11.1 (A:120-164) Mannose-binding protein assoc	0.003

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (94), Expect = 2e-06
 Identities = 16/34 (47%), Positives = 17/34 (50%)

Query: 103 CVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
            VD DEC      K   C N DGSY C CP G+ 
Sbjct: 2   AVDMDECKEPDVCKHGQCINTDGSYRCECPFGYI 35

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 3e-06
 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 6/48 (12%)

Query: 58  CIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVD 105
            +D+DEC+            +C N  G Y CECP GY        CVD
Sbjct: 2   AVDMDECKEPD----VCKHGQCINTDGSYRCECPFGYILAGNE--CVD 43

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 2e-05
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 18 VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCID 60
          VD++EC  P+    +  C N  G+Y C C  GY     E C+D
Sbjct: 3  VDMDECKEPD-VCKHGQCINTDGSYRCECPFGYILAGNE-CVD 43

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (93), Expect = 3e-06
 Identities = 12/39 (30%), Positives = 15/39 (38%)

Query: 19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEG 57
          DI+EC           C N PG++ C C  GY       
Sbjct: 2  DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMM 40

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 4e-05
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 3/41 (7%)

Query: 60  DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFT 100
           DIDEC      P      +C N PG + C+C  GY      
Sbjct: 2   DIDEC---RISPDLCGRGQCVNTPGDFECKCDEGYESGFMM 39

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.3 bits (71), Expect = 0.004
 Identities = 11/33 (33%), Positives = 13/33 (39%), Gaps = 1/33 (3%)

Query: 105 DADECVNRPCG-KDALCSNVDGSYTCTCPPGFR 136
           D DEC   P       C N  G + C C  G+ 
Sbjct: 2   DIDECRISPDLCGRGQCVNTPGDFECKCDEGYE 34

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 9e-06
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD 97
          D+DEC   +    C    +C N  G + C+C  GY G 
Sbjct: 2  DVDECSLGAN--PCEHAGKCINTLGSFECQCLQGYTGP 37

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (88), Expect = 1e-05
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 19 DINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGN 53
          D++EC+   N C     C N  G++ C C  GYTG 
Sbjct: 2  DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP 37

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.0 bits (73), Expect = 0.002
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 105 DADECVNR--PCGKDALCSNVDGSYTCTCPPGF 135
           D DEC     PC     C N  GS+ C C  G+
Sbjct: 2   DVDECSLGANPCEHAGKCINTLGSFECQCLQGY 34

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (88), Expect = 2e-05
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP 54
          DI+EC          +C N  G+Y C C PG+  +P
Sbjct: 1  DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSP 36

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 3e-05
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 60  DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCV 104
           DIDECQ     P+   G  C N  G Y CECPPG+      + C+
Sbjct: 1   DIDECQ---RDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 42

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.3 bits (71), Expect = 0.004
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 105 DADECVNRPCG-KDALCSNVDGSYTCTCPPGFR 136
           D DEC   P   +  +C N +GSY C CPPG +
Sbjct: 1   DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQ 33

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (87), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP 54
          DI+EC           C N  G++ C C  GY  N 
Sbjct: 2  DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNE 37

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (81), Expect = 1e-04
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 60  DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGC 103
           DIDEC      P    G +C N  G + C CP GY+ +  T  C
Sbjct: 2   DIDEC---QELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.1 bits (73), Expect = 0.002
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 105 DADECVNRPCG-KDALCSNVDGSYTCTCPPGFR 136
           D DEC   P   +   C N  GS+ C CP G+ 
Sbjct: 2   DIDECQELPGLCQGGKCINTFGSFQCRCPTGYY 34

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (86), Expect = 2e-05
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)

Query: 60  DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVD 105
           D++EC      P       C N PG Y C+CPP +  +    GCVD
Sbjct: 2   DVNECLD----PTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD 43

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (83), Expect = 7e-05
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP 54
          D+NEC  P  C ++  C N PG+Y C C P +  NP
Sbjct: 2  DVNECLDPTTC-ISGNCVNTPGSYICDCPPDFELNP 36

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (75), Expect = 8e-04
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 105 DADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
           D +EC++        C N  GSY C CPP F 
Sbjct: 2   DVNECLDPTTCISGNCVNTPGSYICDCPPDFE 33

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 3e-05
 Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 4/49 (8%)

Query: 59  IDIDECQYAS----THPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGC 103
           +D+DEC   S      P       C N+ GGY C C PGY        C
Sbjct: 2   VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (81), Expect = 2e-04
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 7/44 (15%)

Query: 18 VDINECAHPN-------ACGVNALCQNYPGNYTCSCQPGYTGNP 54
          VD++ECA  +             LC NY G Y CSC+PGY    
Sbjct: 2  VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQE 45

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (74), Expect = 0.002
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 8/41 (19%)

Query: 104 VDADEC--------VNRPCGKDALCSNVDGSYTCTCPPGFR 136
           VD DEC         +       LC N  G Y C+C PG+ 
Sbjct: 2   VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYE 42

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (83), Expect = 8e-05
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGN 53
          DI+EC +   C  + +C N PG + C C P     
Sbjct: 1  DIDECENGGFC--SGVCHNLPGTFECICGPDSALA 33

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.3 bits (71), Expect = 0.004
 Identities = 12/39 (30%), Positives = 14/39 (35%), Gaps = 5/39 (12%)

Query: 60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDA 98
          DIDEC+             C N PG + C C P      
Sbjct: 1  DIDECENG-----GFCSGVCHNLPGTFECICGPDSALAG 34

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 9e-05
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 104 VDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
           VD D+C + PC     C +   SY C CP GF
Sbjct: 1   VDGDQCESNPCLNGGSCKDDINSYECWCPFGF 32

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 1e-04
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 18 VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTG 52
          VD ++C   N C     C++   +Y C C  G+ G
Sbjct: 1  VDGDQCE-SNPCLNGGSCKDDINSYECWCPFGFEG 34

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 2e-04
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 59 IDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD 97
          +D D+C+   ++P C  G  C +    Y C CP G+ G 
Sbjct: 1  VDGDQCE---SNP-CLNGGSCKDDINSYECWCPFGFEGK 35

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 2e-04
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 20 INECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP 54
          I+EC  P+ C  + LC N  G Y C C+ G+  +P
Sbjct: 1  IDECQDPDTC--SQLCVNLEGGYKCQCEEGFQLDP 33

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.3 bits (71), Expect = 0.004
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 107 DECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
           DEC + P     LC N++G Y C C  GF+
Sbjct: 2   DECQD-PDTCSQLCVNLEGGYKCQCEEGFQ 30

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (79), Expect = 2e-04
 Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 61  IDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVD 105
           IDECQ  +          C N  GG++C C  GY        C +
Sbjct: 1   IDECQV-APGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 44

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (75), Expect = 0.001
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 20 INECAHPN--ACGVNALCQNYPGNYTCSCQPGYTGNP 54
          I+EC      A   +  C N+ G + CSC+ GY  + 
Sbjct: 1  IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHR 37

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.7 bits (77), Expect = 4e-04
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 24 AHPNACGVNALCQNYPGNYTCSCQPGYTGN 53
           + + C V+A C++Y   + C C   YTGN
Sbjct: 4  NNRHQCSVHAECRDYATGFCCRCVANYTGN 33

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.3 bits (76), Expect = 8e-04
 Identities = 8/28 (28%), Positives = 12/28 (42%)

Query: 73  CGPGARCTNFPGGYHCECPPGYHGDAFT 100
           C   A C ++  G+ C C   Y G+   
Sbjct: 9   CSVHAECRDYATGFCCRCVANYTGNGRQ 36

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 33.5 bits (77), Expect = 5e-04
 Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTG 52
          D ++CA  + C     C++   +Y C C P + G
Sbjct: 1  DGDQCA-SSPCQNGGSCKDQLQSYICFCLPAFEG 33

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 33.5 bits (77), Expect = 5e-04
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 105 DADECVNRPCGKDALCSNVDGSYTCTCPPGF 135
           D D+C + PC     C +   SY C C P F
Sbjct: 1   DGDQCASSPCQNGGSCKDQLQSYICFCLPAF 31

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 32.4 bits (74), Expect = 0.002
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 4/38 (10%)

Query: 60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD 97
          D D+C   ++ P C  G  C +    Y C C P + G 
Sbjct: 1  DGDQC---ASSP-CQNGGSCKDQLQSYICFCLPAFEGR 34

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 33.3 bits (76), Expect = 0.001
 Identities = 11/38 (28%), Positives = 13/38 (34%), Gaps = 3/38 (7%)

Query: 79  CTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGK 116
           C        C C  GY     +  CV  +     PCGK
Sbjct: 12  CREERSEVRCSCAHGYVLGDDSKSCVSTERF---PCGK 46

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.001
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 107 DECVNRPCGKDALCSNVDGSYTCTCPPGF 135
           D+C   PC     C +  G YTCTC  GF
Sbjct: 1   DQCETSPCQNQGKCKDGLGEYTCTCLEGF 29

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (75), Expect = 0.001
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 107 DECVNRPCGKDALCSNVDGSYTCTCPPGFR 136
           +EC++   G   +C+++   Y C CP GF+
Sbjct: 3   NECLDNNGGCSHVCNDLKIGYECLCPDGFQ 32

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.001
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 107 DECVNRPCGKDALCSNVDGSYTCTCPPGF 135
           +ECV+ PC  DA C +  G + C C PG+
Sbjct: 2   NECVSNPCQNDATCLDQIGEFQCICMPGY 30

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.001
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 20 INECAHPNACGVNALCQNYPGNYTCSCQPGYTG 52
          +NEC   N C  +A C +  G + C C PGY G
Sbjct: 1  VNECV-SNPCQNDATCLDQIGEFQCICMPGYEG 32

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.2 bits (71), Expect = 0.004
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 4/37 (10%)

Query: 61 IDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD 97
          ++EC    ++P C   A C +  G + C C PGY G 
Sbjct: 1  VNEC---VSNP-CQNDATCLDQIGEFQCICMPGYEGV 33

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.5 bits (74), Expect = 0.001
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 21 NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP 54
          NEC        +  C N+ G Y CSC P Y  + 
Sbjct: 1  NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHD 34

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.0 bits (73), Expect = 0.002
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 107 DECVNRPCGKDALCSNVDGSYTCTCPPGF 135
           DEC + PC  +  C +    + C CP GF
Sbjct: 1   DECASSPCLHNGRCLDKINEFQCECPTGF 29

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.7 bits (72), Expect = 0.003
 Identities = 10/38 (26%), Positives = 11/38 (28%), Gaps = 3/38 (7%)

Query: 79  CTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGK 116
           C        C C  GY        C+        PCGK
Sbjct: 14  CHEEQNSVVCSCARGYTLADNGKACIPTGPY---PCGK 48

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 31.4 bits (71), Expect = 0.003
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 61  IDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGC 103
           +DEC+  S          C N+ GGY+C C  GY        C
Sbjct: 1   VDECRT-SLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTC 42

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	136
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	99.03
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.02
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.93
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.91
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.84
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.82
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.81
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.8
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.78
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.78
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.75
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.71
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.71
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.68
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.67
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.66
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.64
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.64
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.63
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.63
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.62
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.61
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.58
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.54
d1szba2	45	Mannose-binding protein associated serine protease	98.53
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.53
d1nt0a3	45	Mannose-binding protein associated serine protease	98.5
d1nt0a3	45	Mannose-binding protein associated serine protease	98.48
d1szba2	45	Mannose-binding protein associated serine protease	98.48
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	98.46
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.37
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.28
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	98.28
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.26
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	98.24
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.23
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.22
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.18
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	98.17
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	98.16
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.09
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.07
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	98.02
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.97
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.81
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.72
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.71
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.66
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.57
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.53
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	97.46
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.35
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	97.31
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	97.23
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	97.22
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.22
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.2
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.18
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	97.18
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	96.95
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.84
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	96.82
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	96.78
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	96.47
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	96.16
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	96.05
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	95.99
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	95.75
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	95.24
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	94.46
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	93.78
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	92.81
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	89.41
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	86.83

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=2.1e-10  Score=49.97  Aligned_cols=38  Identities=37%  Similarity=0.859  Sum_probs=33.4

Q ss_pred             eeCCCCCC-CCCCCCCCeeeeCCCCeEeeCCCCCccCCC
Q psy2856          18 VDINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        18 ~~~~~c~~-~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~   55 (136)
                      .|||+|.. +++|.++++|+++.++|.|.|++||.|..+
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~~C   39 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRC   39 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTS
T ss_pred             CCCccccCCCCCCCCCcEeECCCCCEEeECCCCCcCCCC
Confidence            47899984 468999999999999999999999998754

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=6e-11  Score=51.87  Aligned_cols=38  Identities=34%  Similarity=0.732  Sum_probs=31.6

Q ss_pred             eeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          16 VFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        16 ~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      +|.|+|||..+. +...+.|.|++|+|.|.|++||.+..
T Consensus         1 sCvDidEC~~~~-~~~~~~C~Nt~Gsy~C~C~~Gy~~~g   38 (43)
T d1emoa1           1 SAVDMDECKEPD-VCKHGQCINTDGSYRCECPFGYILAG   38 (43)
T ss_dssp             CCCCCCSSSSTT-SCSSSCCCCCSSCCCCCCCTTEEESS
T ss_pred             CCcceeccCCcC-CCCCCEeECCCCCeEeECCCCcccCC
Confidence            589999998644 34578999999999999999998643

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2e-10  Score=50.14  Aligned_cols=34  Identities=47%  Similarity=0.944  Sum_probs=30.3

Q ss_pred             eeeCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         103 CVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       103 ~~~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      |+|++||....+...+.|+|++|+|.|.|++||+
T Consensus         2 CvDidEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~   35 (43)
T d1emoa1           2 AVDMDECKEPDVCKHGQCINTDGSYRCECPFGYI   35 (43)
T ss_dssp             CCCCCSSSSTTSCSSSCCCCCSSCCCCCCCTTEE
T ss_pred             CcceeccCCcCCCCCCEeECCCCCeEeECCCCcc
Confidence            6799999887666788999999999999999983

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=1.1e-09  Score=46.63  Aligned_cols=37  Identities=30%  Similarity=0.706  Sum_probs=33.2

Q ss_pred             eeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC
Q psy2856          18 VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        18 ~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~   55 (136)
                      .|+|+|.. +||.+++.|++..++|.|.|.+||.|..+
T Consensus         1 id~d~C~~-~PC~ngg~C~~~~~~y~C~C~~g~~G~~C   37 (39)
T d1edmb_           1 VDGDQCES-NPCLNGGSCKDDINSYECWCPFGFEGKNC   37 (39)
T ss_dssp             CCCCTTTT-CCCCTTCEEEEETTEEEEECCTTCCSTTS
T ss_pred             CccccCCC-CCCCCCcEEEcCCCCEEEECCCCCCCCCC
Confidence            37899985 89999999999999999999999998754

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.84  E-value=7.9e-10  Score=46.57  Aligned_cols=35  Identities=29%  Similarity=0.782  Sum_probs=31.8

Q ss_pred             eCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        19 ~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      |+|+|.. +||.+++.|.+..++|.|.|.+||.|..
T Consensus         1 D~d~C~~-~PC~ngg~C~~~~~~y~C~C~~g~~G~~   35 (37)
T d2c4fl1           1 DGDQCAS-SPCQNGGSCKDQLQSYICFCLPAFEGRN   35 (37)
T ss_dssp             TCCGGGG-CCCCTTCEEEEETTEEEEECCTTEESTT
T ss_pred             CcccCCC-CCCCCCCEEECCCCCeEEECCCCCcCCC
Confidence            6789984 8999999999999999999999999864

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=3.8e-09  Score=44.92  Aligned_cols=35  Identities=40%  Similarity=0.976  Sum_probs=31.7

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC
Q psy2856          20 INECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        20 ~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~   55 (136)
                      ||+|.. +||.+++.|.+..++|.|.|.+||.|..+
T Consensus         1 Id~C~~-~PC~n~g~C~~~~~~y~C~C~~G~~G~~C   35 (39)
T d2vj3a2           1 VNECVS-NPCQNDATCLDQIGEFQCICMPGYEGVHC   35 (39)
T ss_dssp             CCTTTT-CCCCSSCEEEECSSCEEEECCTTEESSSS
T ss_pred             CcCCcC-CCCCCCCEEECCCCCEEEeCCCCCccCcC
Confidence            688985 89999999999999999999999999764

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.3e-09  Score=47.59  Aligned_cols=36  Identities=44%  Similarity=1.154  Sum_probs=29.8

Q ss_pred             eeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          18 VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        18 ~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      .|||||+.++.+ ..+.|+|++|+|.|.|.+||....
T Consensus         1 TDidEC~~~~~~-c~~~C~Nt~G~y~C~C~~Gy~l~~   36 (43)
T d1uzka1           1 TDVNECLDPTTC-ISGNCVNTPGSYICDCPPDFELNP   36 (43)
T ss_dssp             CCCCGGGSTTSS-BTSEEEEETTEEEEECCTTCEECT
T ss_pred             CCccccCCCCcC-cCCEeECCCCCEEEecCCCCEECC
Confidence            379999865544 468999999999999999998764

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.5e-09  Score=47.40  Aligned_cols=35  Identities=40%  Similarity=1.053  Sum_probs=28.9

Q ss_pred             eeCCCCCCCC-CCCCCCeeeeCCCCeEeeCCCCCccC
Q psy2856          18 VDINECAHPN-ACGVNALCQNYPGNYTCSCQPGYTGN   53 (136)
Q Consensus        18 ~~~~~c~~~~-~~~~~~~C~~~~g~~~C~c~~g~~~~   53 (136)
                      .|||||.... .|. .+.|.|++|+|.|.|++||.+.
T Consensus         1 TDidEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~~~   36 (44)
T d1lmja1           1 TDIDECRISPDLCG-RGQCVNTPGDFECKCDEGYESG   36 (44)
T ss_dssp             CCCCTTTTCSSTTT-TSCEEEETTEEEECCCSSEEEC
T ss_pred             CcccccCCCCCCCC-CCEeEcCCCCeEEeCCCCCccC
Confidence            3899998533 454 5789999999999999999875

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1e-09  Score=47.62  Aligned_cols=35  Identities=43%  Similarity=1.059  Sum_probs=28.1

Q ss_pred             eCCCCCC-CCCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          19 DINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        19 ~~~~c~~-~~~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      |||||.. +..|. .+.|.|++|+|.|.|.+||....
T Consensus         1 DidEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~l~~   36 (42)
T d1lmja2           1 DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSP   36 (42)
T ss_dssp             ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCCS
T ss_pred             CccccCCCCCCCC-CCEeECCCCCeEEeCCCCCeECc
Confidence            6888874 33454 57999999999999999998754

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=2.1e-09  Score=46.96  Aligned_cols=32  Identities=41%  Similarity=0.978  Sum_probs=27.4

Q ss_pred             eCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         105 DADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       105 ~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ||+||.......++.|+|+.|+|.|.|++||+
T Consensus         2 DidEC~~~~~~c~~~C~Nt~G~y~C~C~~Gy~   33 (43)
T d1uzka1           2 DVNECLDPTTCISGNCVNTPGSYICDCPPDFE   33 (43)
T ss_dssp             CCCGGGSTTSSBTSEEEEETTEEEEECCTTCE
T ss_pred             CccccCCCCcCcCCEeECCCCCEEEecCCCCE
Confidence            78899876544678999999999999999984

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=5.3e-09  Score=45.07  Aligned_cols=33  Identities=42%  Similarity=1.188  Sum_probs=27.9

Q ss_pred             CCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          20 INECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        20 ~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      ||||+.+.+|  .+.|.|+.|+|.|.|++||....
T Consensus         1 idEC~~~~~C--~~~C~n~~Gsy~C~C~~Gy~L~~   33 (41)
T d1i0ua2           1 IDECQDPDTC--SQLCVNLEGGYKCQCEEGFQLDP   33 (41)
T ss_dssp             CCTTTTTTSC--SSCEECSSSCCEECCCTTEEECT
T ss_pred             CccCCCCCCC--CCEeECCCCCEEeECCCCCeECC
Confidence            6899865566  57899999999999999998764

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=9.1e-09  Score=44.61  Aligned_cols=32  Identities=41%  Similarity=0.970  Sum_probs=28.4

Q ss_pred             eCCCCCC--CCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         105 DADECVN--RPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       105 ~~~~c~~--~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ||+||..  .+|.+++.|+++.++|.|.|++||.
T Consensus         2 DideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~   35 (42)
T d2vj3a1           2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYT   35 (42)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE
T ss_pred             CCccccCCCCCCCCCcEeECCCCCEEeECCCCCc
Confidence            6888874  5899999999999999999999983

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=1.5e-09  Score=46.18  Aligned_cols=33  Identities=36%  Similarity=0.974  Sum_probs=28.1

Q ss_pred             eCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccC
Q psy2856          19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGN   53 (136)
Q Consensus        19 ~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~   53 (136)
                      |||||+.+.+|  .+.|+|++|+|.|.|++||.+.
T Consensus         1 DidEC~~~~~C--~~~C~N~~Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3           1 DIDECENGGFC--SGVCHNLPGTFECICGPDSALA   33 (40)
T ss_dssp             ECCHHHHCSSC--SSEEEECSSSEEEEECSSSSCE
T ss_pred             CccccCCCcCc--cCEeeCCCCCeEeECCCCCeeC
Confidence            68888765566  5799999999999999999875

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=2.1e-09  Score=46.87  Aligned_cols=36  Identities=39%  Similarity=0.877  Sum_probs=28.9

Q ss_pred             eeCCCCCC-CCCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          18 VDINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        18 ~~~~~c~~-~~~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      .|||||.. +..|. .+.|+|++|+|.|.|.+||....
T Consensus         1 qDinEC~~~~~~c~-~~~C~Nt~Gsy~C~C~~Gy~l~~   37 (43)
T d1uzka2           1 EDIDECQELPGLCQ-GGKCINTFGSFQCRCPTGYYLNE   37 (43)
T ss_dssp             EECCHHHHCGGGGB-TSEEEECSSCEEEECCTTCCBCT
T ss_pred             CCcccccCCCCCcC-CCEEECCCCCeEeECCCCCeECc
Confidence            48899974 33454 57899999999999999998764

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=3.7e-09  Score=45.83  Aligned_cols=32  Identities=47%  Similarity=1.137  Sum_probs=24.9

Q ss_pred             eCCCCCCCCCC-CCCeeeecCCCeeEeCCCCCC
Q psy2856         105 DADECVNRPCG-KDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       105 ~~~~c~~~~~~-~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ||+||...... .++.|+|++|+|.|.|++||+
T Consensus         1 DidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~   33 (42)
T d1lmja2           1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQ   33 (42)
T ss_dssp             ECCHHHHCSSTTTTSEEEEETTEEEEESCTTSC
T ss_pred             CccccCCCCCCCCCCEeECCCCCeEEeCCCCCe
Confidence            57788755322 246999999999999999985

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=3.4e-09  Score=45.08  Aligned_cols=31  Identities=35%  Similarity=0.772  Sum_probs=25.3

Q ss_pred             eCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         105 DADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       105 ~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ||+||... ....+.|+|++|+|.|.|++||+
T Consensus         1 DidEC~~~-~~C~~~C~N~~Gsy~C~C~~Gy~   31 (40)
T d1dx5i3           1 DIDECENG-GFCSGVCHNLPGTFECICGPDSA   31 (40)
T ss_dssp             ECCHHHHC-SSCSSEEEECSSSEEEEECSSSS
T ss_pred             CccccCCC-cCccCEeeCCCCCeEeECCCCCe
Confidence            57788653 34568999999999999999984

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=2.2e-08  Score=45.66  Aligned_cols=37  Identities=46%  Similarity=1.007  Sum_probs=28.5

Q ss_pred             eeCCCCCCCC-CC------CCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          18 VDINECAHPN-AC------GVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        18 ~~~~~c~~~~-~~------~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      +|||||.... .+      ...+.|+|++|+|.|.|++||.+..
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~~   45 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQE   45 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECT
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeECC
Confidence            5899998533 22      2345899999999999999998654

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=1.4e-08  Score=46.38  Aligned_cols=33  Identities=45%  Similarity=0.979  Sum_probs=25.8

Q ss_pred             eeCCCCCCCC--------CCCCCeeeecCCCeeEeCCCCCC
Q psy2856         104 VDADECVNRP--------CGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       104 ~~~~~c~~~~--------~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      +||+||....        +...+.|+|++|+|.|.|++||+
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~   42 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYE   42 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCE
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCe
Confidence            4788887541        23456899999999999999984

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=3e-09  Score=46.36  Aligned_cols=32  Identities=41%  Similarity=0.926  Sum_probs=25.9

Q ss_pred             eeCCCCCCC--CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         104 VDADECVNR--PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       104 ~~~~~c~~~--~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      +||+||...  .|. .+.|+|++|+|.|.|++||+
T Consensus         1 qDinEC~~~~~~c~-~~~C~Nt~Gsy~C~C~~Gy~   34 (43)
T d1uzka2           1 EDIDECQELPGLCQ-GGKCINTFGSFQCRCPTGYY   34 (43)
T ss_dssp             EECCHHHHCGGGGB-TSEEEECSSCEEEECCTTCC
T ss_pred             CCcccccCCCCCcC-CCEEECCCCCeEeECCCCCe
Confidence            378888755  342 47999999999999999985

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=3.1e-08  Score=42.06  Aligned_cols=32  Identities=41%  Similarity=0.948  Sum_probs=29.8

Q ss_pred             eCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         105 DADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       105 ~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ++++|.+.+|.+++.|++..++|.|.|++||.
T Consensus         2 d~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~   33 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFE   33 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCC
T ss_pred             ccccCCCCCCCCCcEEEcCCCCEEEECCCCCC
Confidence            67899999999999999999999999999984

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=3.8e-08  Score=40.75  Aligned_cols=33  Identities=33%  Similarity=0.853  Sum_probs=29.4

Q ss_pred             CCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          21 NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      |+|.. +||.++++|++..++|.|.|..||.|..
T Consensus         1 d~C~~-~PC~ngg~C~~~~~~y~C~C~~g~~G~~   33 (35)
T d2vj3a3           1 DECAS-SPCLHNGRCLDKINEFQCECPTGFTGHL   33 (35)
T ss_dssp             CTTTT-CCSTTTCEEEECSSCEEEECCTTEESSS
T ss_pred             CCCCC-CCCCCCcEEECCCCCeEEECCCCCCCCC
Confidence            57774 8999999999999999999999998864

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.1e-08  Score=44.54  Aligned_cols=31  Identities=39%  Similarity=0.997  Sum_probs=25.7

Q ss_pred             eCCCCCCC--CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         105 DADECVNR--PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       105 ~~~~c~~~--~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ||+||...  .|. .+.|+|+.|+|.|.|++||+
T Consensus         2 DidEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~   34 (44)
T d1lmja1           2 DIDECRISPDLCG-RGQCVNTPGDFECKCDEGYE   34 (44)
T ss_dssp             CCCTTTTCSSTTT-TSCEEEETTEEEECCCSSEE
T ss_pred             cccccCCCCCCCC-CCEeEcCCCCeEEeCCCCCc
Confidence            78999865  343 46899999999999999983

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=3.4e-08  Score=41.87  Aligned_cols=35  Identities=31%  Similarity=0.892  Sum_probs=30.8

Q ss_pred             CCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCC
Q psy2856          21 NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFE   56 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~   56 (136)
                      |+|.. +||.+++.|++..++|.|.|.+||.|..++
T Consensus         1 D~C~~-~PC~ngg~C~~~~~~y~C~C~~G~~G~~Ce   35 (39)
T d1xkba1           1 DQCET-SPCQNQGKCKDGLGEYTCTCLEGFEGKNCE   35 (39)
T ss_dssp             CTTTT-CCCCSSCEECCCSSSCCEECCTTEETTTTC
T ss_pred             CcCCC-CCCCCCcEEECCCCCEEEECCCCCCcCcCe
Confidence            57874 899999999999999999999999997653

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.54  E-value=2.6e-08  Score=41.76  Aligned_cols=32  Identities=38%  Similarity=0.958  Sum_probs=29.2

Q ss_pred             eCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         105 DADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       105 ~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      |+++|.+.+|.+++.|++..++|.|.|++||.
T Consensus         1 D~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~   32 (37)
T d2c4fl1           1 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFE   32 (37)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEE
T ss_pred             CcccCCCCCCCCCCEEECCCCCeEEECCCCCc
Confidence            57889999999999999999999999999983

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=6.2e-08  Score=42.51  Aligned_cols=35  Identities=34%  Similarity=0.721  Sum_probs=27.5

Q ss_pred             CCCCCCCC--CCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          20 INECAHPN--ACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        20 ~~~c~~~~--~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      ||||+...  .....+.|+|++|+|.|.|..||....
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~l~~   37 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHR   37 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECT
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCeECC
Confidence            68887533  224467999999999999999998754

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=6.7e-08  Score=40.94  Aligned_cols=31  Identities=42%  Similarity=1.123  Sum_probs=28.3

Q ss_pred             CCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         106 ADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       106 ~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      |++|.+.+|.+.+.|++..++|.|.|++||.
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~   31 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYE   31 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEE
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCc
Confidence            5789999999999999999999999999983

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.50  E-value=2.9e-08  Score=43.59  Aligned_cols=31  Identities=35%  Similarity=0.775  Sum_probs=23.1

Q ss_pred             CCCCCCC---CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         106 ADECVNR---PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       106 ~~~c~~~---~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      |+||...   .....+.|+|+.|+|.|.|++||+
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy~C~C~~Gy~   34 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYI   34 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEEEEECCTTEE
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCEEEeCCCCCE
Confidence            5677654   234678999999999999999984

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.48  E-value=6.4e-08  Score=42.47  Aligned_cols=35  Identities=34%  Similarity=0.838  Sum_probs=25.3

Q ss_pred             CCCCCCCC--CCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          20 INECAHPN--ACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        20 ~~~c~~~~--~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      ||||...+  .....+.|.|++|+|.|.|++||....
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy~C~C~~Gy~L~~   37 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQ   37 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEEEEECCTTEEECT
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCEEEeCCCCCEECC
Confidence            57887532  233467999999999999999998654

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=5.2e-08  Score=42.78  Aligned_cols=31  Identities=35%  Similarity=0.755  Sum_probs=24.9

Q ss_pred             CCCCCCCC---CCCCCeeeecCCCeeEeCCCCCC
Q psy2856         106 ADECVNRP---CGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       106 ~~~c~~~~---~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      |+||....   ....+.|+|++|+|.|.|++||+
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~   34 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYV   34 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCe
Confidence            56777552   25678999999999999999984

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=6e-08  Score=41.34  Aligned_cols=31  Identities=32%  Similarity=0.954  Sum_probs=26.4

Q ss_pred             CCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         106 ADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       106 ~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ++||........+.|++++++|.|.|++||+
T Consensus         2 ~neC~~~nggC~h~C~n~~g~~~C~C~~Gy~   32 (40)
T d3bpse1           2 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQ   32 (40)
T ss_dssp             SCGGGTGGGGCSSEEEECSSSEEEECCTTCC
T ss_pred             cccCCCCCCCCcCEEEcCCCCEEEECCCCCE
Confidence            4678776666779999999999999999985

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=1e-07  Score=40.87  Aligned_cols=30  Identities=43%  Similarity=1.058  Sum_probs=24.3

Q ss_pred             CCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         106 ADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       106 ~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      |+||.. .....+.|+|+.|+|.|.|++||+
T Consensus         1 idEC~~-~~~C~~~C~n~~Gsy~C~C~~Gy~   30 (41)
T d1i0ua2           1 IDECQD-PDTCSQLCVNLEGGYKCQCEEGFQ   30 (41)
T ss_dssp             CCTTTT-TTSCSSCEECSSSCCEECCCTTEE
T ss_pred             CccCCC-CCCCCCEeECCCCCEEeECCCCCe
Confidence            567864 345578999999999999999983

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=5.8e-07  Score=37.06  Aligned_cols=29  Identities=38%  Similarity=1.061  Sum_probs=26.5

Q ss_pred             CCCCCCCCCCCCeeeecCCCeeEeCCCCC
Q psy2856         107 DECVNRPCGKDALCSNVDGSYTCTCPPGF  135 (136)
Q Consensus       107 ~~c~~~~~~~~~~c~~~~g~~~c~C~~g~  135 (136)
                      |+|.+.+|.+++.|++..++|.|.|++||
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~   29 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGF   29 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTE
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCC
Confidence            46888899999999999999999999997

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=6.8e-07  Score=38.35  Aligned_cols=34  Identities=35%  Similarity=0.771  Sum_probs=25.2

Q ss_pred             CCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          21 NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      |||...........|+|++|+|.|.|+.||....
T Consensus         1 dEC~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~L~~   34 (42)
T d1nzia2           1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHD   34 (42)
T ss_dssp             CTTTC-CCCCSSSEEEEETTEEEEECCTTCEECT
T ss_pred             CCCCCCCCcCCCCEeecCCCCEEEeCCCCCEECC
Confidence            5776422123367999999999999999998764

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=1.6e-07  Score=39.78  Aligned_cols=34  Identities=32%  Similarity=0.882  Sum_probs=29.9

Q ss_pred             CCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC
Q psy2856          21 NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~   55 (136)
                      +.|.. +||.+++.|++..++|.|.|.+||.|..+
T Consensus         2 ~~C~~-~pC~ngg~C~~~~~~~~C~C~~g~~G~~C   35 (39)
T d1g1ta2           2 AACTN-TSCSGHGECVETINNYTCKCDPGFSGLKC   35 (39)
T ss_dssp             CCCCT-TGGGGSEEEEEETTEEEEEECTTEESTTS
T ss_pred             CcccC-CcCCCCcEEECCCCCEEEeCCCCCcCcCc
Confidence            46764 89999999999999999999999999764

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=5.5e-07  Score=38.66  Aligned_cols=30  Identities=33%  Similarity=0.875  Sum_probs=23.5

Q ss_pred             CCCCCC-CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         107 DECVNR-PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       107 ~~c~~~-~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      +||... .....+.|+|++|+|.|.|++||+
T Consensus         1 dEC~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~   31 (42)
T d1nzia2           1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYF   31 (42)
T ss_dssp             CTTTC-CCCCSSSEEEEETTEEEEECCTTCE
T ss_pred             CCCCCCCCcCCCCEeecCCCCEEEeCCCCCE
Confidence            467542 345678999999999999999983

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=5e-07  Score=38.18  Aligned_cols=29  Identities=45%  Similarity=1.084  Sum_probs=26.6

Q ss_pred             CCCCCCCCCCCCeeeecCCCeeEeCCCCC
Q psy2856         107 DECVNRPCGKDALCSNVDGSYTCTCPPGF  135 (136)
Q Consensus       107 ~~c~~~~~~~~~~c~~~~g~~~c~C~~g~  135 (136)
                      |+|.+.+|.+++.|++..++|.|.|++||
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~   29 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGF   29 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTE
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCC
Confidence            46888899999999999999999999998

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=3.6e-07  Score=38.88  Aligned_cols=34  Identities=38%  Similarity=0.896  Sum_probs=29.7

Q ss_pred             CCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC
Q psy2856          21 NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~   55 (136)
                      +.|.. +||.+++.|+...++|.|.|.+||.|..+
T Consensus         2 ~~C~~-~pC~ngg~C~~~~~~y~C~C~~g~~G~~C   35 (40)
T d1g1sa2           2 ASCQD-MSCSKQGECLETIGNYTCSCYPGFYGPEC   35 (40)
T ss_dssp             CCCCT-TGGGGSEEEEECSSSEEEEECTTEESTTS
T ss_pred             CcccC-CcCCCCcEEECCCCCeEEeCCCCccCCCC
Confidence            45664 89999999999999999999999999764

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=6.9e-07  Score=39.45  Aligned_cols=36  Identities=28%  Similarity=0.739  Sum_probs=30.6

Q ss_pred             eCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCC
Q psy2856          19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFE   56 (136)
Q Consensus        19 ~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~   56 (136)
                      ..++|.. +||.+ +.|.+..++|.|.|.+||.|..++
T Consensus         7 ~~~~C~~-~PC~n-G~C~~~~~~y~C~C~~G~~G~~Ce   42 (48)
T d1autl1           7 LEHPCAS-LCCGH-GTCIDGIGSFSCDCRSGWEGRFCQ   42 (48)
T ss_dssp             SCCSSSS-TTTTS-EEECCCSSCCCEEECTTEESTTSC
T ss_pred             CCCcccC-CCCCC-CEEECCCCCCeEeCCCCCcCCCcc
Confidence            3578875 89987 799999999999999999998654

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=3.4e-07  Score=38.92  Aligned_cols=34  Identities=29%  Similarity=0.682  Sum_probs=26.3

Q ss_pred             eCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccC
Q psy2856          19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGN   53 (136)
Q Consensus        19 ~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~   53 (136)
                      ++|||...+ ......|.|++++|.|.|++||...
T Consensus         1 G~neC~~~n-ggC~h~C~n~~g~~~C~C~~Gy~L~   34 (40)
T d3bpse1           1 GTNECLDNN-GGCSHVCNDLKIGYECLCPDGFQLV   34 (40)
T ss_dssp             CSCGGGTGG-GGCSSEEEECSSSEEEECCTTCCEE
T ss_pred             CcccCCCCC-CCCcCEEEcCCCCEEEECCCCCEEC
Confidence            367887522 2336799999999999999999764

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.16  E-value=6.7e-07  Score=37.93  Aligned_cols=28  Identities=39%  Similarity=1.016  Sum_probs=24.7

Q ss_pred             CCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          27 NACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        27 ~~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      +.|...+.|.|++|+|.|.|++||.++.
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~GdG   34 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYTGNG   34 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEEECS
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCcCCC
Confidence            3567789999999999999999999876

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.09  E-value=9.9e-07  Score=37.88  Aligned_cols=36  Identities=28%  Similarity=0.845  Sum_probs=29.5

Q ss_pred             CCCCCCCCCCCCCCeeeeC-CCCeEeeCCC-CCccCCCC
Q psy2856          20 INECAHPNACGVNALCQNY-PGNYTCSCQP-GYTGNPFE   56 (136)
Q Consensus        20 ~~~c~~~~~~~~~~~C~~~-~g~~~C~c~~-g~~~~~~~   56 (136)
                      +|+|.. ++|.++++|+.. .++|.|.|.. ||.|..++
T Consensus         2 id~C~~-nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce   39 (42)
T d1q4ga2           2 VNPCCY-YPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT   39 (42)
T ss_dssp             CCGGGG-CCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred             CccCcC-CCCCCCCEeeeCCCCCEEEECCCCCcCCcCcC
Confidence            577874 899999999875 5789999986 89987653

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=3.2e-06  Score=33.95  Aligned_cols=33  Identities=39%  Similarity=1.098  Sum_probs=27.6

Q ss_pred             CCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856          21 NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP   54 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~   54 (136)
                      |+|...++|+ ++.|.|..|.|.|.|..||...+
T Consensus         2 dECsignpCG-nGTCtNviGgFec~C~~GFepgp   34 (39)
T d1emoa2           2 DECSVGNPCG-NGTCKNVIGGFECTCEEGFEPGP   34 (39)
T ss_dssp             CGGGTTCSSS-SSCEEECSSSEEECCSSSSCCCS
T ss_pred             CccccCCccC-CceeeecccceEEeecCCcCCCc
Confidence            6777667887 47899999999999999997654

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=7.9e-06  Score=34.78  Aligned_cols=31  Identities=26%  Similarity=0.701  Sum_probs=26.2

Q ss_pred             CCCCCCCCeeeeCC--CCeEeeCCCCCccCCCC
Q psy2856          26 PNACGVNALCQNYP--GNYTCSCQPGYTGNPFE   56 (136)
Q Consensus        26 ~~~~~~~~~C~~~~--g~~~C~c~~g~~~~~~~   56 (136)
                      ++||.++++|+...  +.|.|.|.+||.|..++
T Consensus         3 ~nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce   35 (41)
T d1tpga1           3 EPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCE   35 (41)
T ss_dssp             SCCSCTTCEEEEESSSSCEEEECCTTCBSSSCC
T ss_pred             CCCCCCCCEEecCCCCCCeEECCCCCCCCCCcC
Confidence            47899999999753  57999999999998654

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.97  E-value=5.5e-06  Score=35.27  Aligned_cols=35  Identities=29%  Similarity=0.752  Sum_probs=28.8

Q ss_pred             CCCCCCCCCCCCCeeeeC-CCCeEeeCC-CCCccCCCC
Q psy2856          21 NECAHPNACGVNALCQNY-PGNYTCSCQ-PGYTGNPFE   56 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~~-~g~~~C~c~-~g~~~~~~~   56 (136)
                      |+|.. ++|.++++|++. .++|.|.|. +||.|..++
T Consensus         2 d~C~~-~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce   38 (41)
T d1cvua2           2 NPCCS-NPCQNRGECMSTGFDQYKCDCTRTGFYGENCT   38 (41)
T ss_dssp             CTTTT-CCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred             CcCcC-CCCCCCCEEEECCCCCEEEeCcCCCcCCcCcC
Confidence            67874 899999999875 578999996 699987653

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=2.2e-06  Score=36.16  Aligned_cols=30  Identities=37%  Similarity=0.963  Sum_probs=26.0

Q ss_pred             CCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         107 DECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       107 ~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      +.|.+.+|.+++.|++..++|.|.|++||.
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~   31 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFS   31 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEE
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCc
Confidence            357777888999999999999999999983

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=5.1e-06  Score=35.18  Aligned_cols=28  Identities=43%  Similarity=1.090  Sum_probs=25.0

Q ss_pred             CCCCCCCCCCCeeeecCCCeeEeCCCCC
Q psy2856         108 ECVNRPCGKDALCSNVDGSYTCTCPPGF  135 (136)
Q Consensus       108 ~c~~~~~~~~~~c~~~~g~~~c~C~~g~  135 (136)
                      .|.+.+|.+++.|++..++|.|.|++||
T Consensus         3 ~C~~~pC~ngg~C~~~~~~y~C~C~~g~   30 (40)
T d1g1sa2           3 SCQDMSCSKQGECLETIGNYTCSCYPGF   30 (40)
T ss_dssp             CCCTTGGGGSEEEEECSSSEEEEECTTE
T ss_pred             cccCCcCCCCcEEECCCCCeEEeCCCCc
Confidence            4677788889999999999999999998

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=7.4e-06  Score=34.60  Aligned_cols=24  Identities=21%  Similarity=0.731  Sum_probs=21.1

Q ss_pred             CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         113 PCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       113 ~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      .|+.++.|+|++|+|.|.|++||.
T Consensus         8 ~C~~~A~C~Nt~Gsy~C~C~~Gy~   31 (40)
T d1gl4a2           8 QCSVHAECRDYATGFCCRCVANYT   31 (40)
T ss_dssp             GSCTTEEEEECSSCEEEEECTTEE
T ss_pred             CCCCCCEeecCCCCeEeECCCCCc
Confidence            566778999999999999999983

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1e-05  Score=35.61  Aligned_cols=31  Identities=29%  Similarity=0.799  Sum_probs=26.4

Q ss_pred             eCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         105 DADECVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       105 ~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ..++|.+.+|.+ +.|++..++|.|.|++||.
T Consensus         7 ~~~~C~~~PC~n-G~C~~~~~~y~C~C~~G~~   37 (48)
T d1autl1           7 LEHPCASLCCGH-GTCIDGIGSFSCDCRSGWE   37 (48)
T ss_dssp             SCCSSSSTTTTS-EEECCCSSCCCEEECTTEE
T ss_pred             CCCcccCCCCCC-CEEECCCCCCeEeCCCCCc
Confidence            456788888976 7999999999999999983

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.57  E-value=3.1e-05  Score=33.06  Aligned_cols=30  Identities=27%  Similarity=0.905  Sum_probs=25.5

Q ss_pred             CCCCCCCCCCCCCeeeec-CCCeeEeCCC-CC
Q psy2856         106 ADECVNRPCGKDALCSNV-DGSYTCTCPP-GF  135 (136)
Q Consensus       106 ~~~c~~~~~~~~~~c~~~-~g~~~c~C~~-g~  135 (136)
                      +++|....|.+++.|++. .++|.|.|+. ||
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~   33 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGY   33 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSE
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCc
Confidence            577888899999999875 6789999986 77

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=2.7e-05  Score=36.42  Aligned_cols=37  Identities=32%  Similarity=0.704  Sum_probs=29.0

Q ss_pred             eCCCCCCCCCCCCCCeee-----eCCCCeEeeCCCCCccCCCC
Q psy2856          19 DINECAHPNACGVNALCQ-----NYPGNYTCSCQPGYTGNPFE   56 (136)
Q Consensus        19 ~~~~c~~~~~~~~~~~C~-----~~~g~~~C~c~~g~~~~~~~   56 (136)
                      +.++|.. ++|.+++.|.     +..++|.|.|.+||.|..++
T Consensus         5 ~c~ec~~-~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce   46 (63)
T d1haea_           5 KCAEKEK-TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT   46 (63)
T ss_dssp             ECCHHHH-TTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred             cCCCCcC-CcCCCCCEEeecccccCCCCEEeECCCCCCCCCcC
Confidence            4455653 7899999995     44578999999999998764

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=2.7e-05  Score=34.57  Aligned_cols=28  Identities=29%  Similarity=0.725  Sum_probs=22.2

Q ss_pred             CCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         109 CVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       109 c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      |+.....+++.|+++.++|.|.|+.||+
T Consensus         2 C~~~NGgC~~~C~~~~g~~~C~C~~Gy~   29 (50)
T d1autl2           2 CSLDNGGCTHYCLEEVGWRRCSCAPGYK   29 (50)
T ss_dssp             SSSGGGGCSSEEEECSSSEEEECCTTEE
T ss_pred             CCCCCCCcccEeecCCCCeEEECCCCCE
Confidence            3334445679999999999999999983

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.00017  Score=30.46  Aligned_cols=28  Identities=29%  Similarity=0.870  Sum_probs=22.4

Q ss_pred             CCCCCCCCCCeeeec--CCCeeEeCCCCCC
Q psy2856         109 CVNRPCGKDALCSNV--DGSYTCTCPPGFR  136 (136)
Q Consensus       109 c~~~~~~~~~~c~~~--~g~~~c~C~~g~~  136 (136)
                      |.+.+|.+++.|+..  .++|.|.|++||.
T Consensus         1 C~~nPC~ngG~C~~~~~~~~y~C~C~~g~~   30 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFA   30 (41)
T ss_dssp             CSSCCSCTTCEEEEESSSSCEEEECCTTCB
T ss_pred             CcCCCCCCCCEEecCCCCCCeEECCCCCCC
Confidence            455688889999875  4579999999984

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=2.8e-05  Score=34.65  Aligned_cols=28  Identities=25%  Similarity=0.669  Sum_probs=22.2

Q ss_pred             CCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         109 CVNRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       109 c~~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      |......+++.|++++++|.|.|+.||+
T Consensus         3 C~~~NGgC~h~C~n~~g~~~C~C~~Gy~   30 (51)
T d2p3ua1           3 CSLDNGDCDQFCHEEQNSVVCSCARGYT   30 (51)
T ss_dssp             GGTGGGGCSSEEEEETTEEEEECCTTEE
T ss_pred             cCCCCCCcccEeecCCCCeEeEcCCCCE
Confidence            3334445678999999999999999983

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.23  E-value=4.2e-05  Score=34.07  Aligned_cols=26  Identities=23%  Similarity=0.601  Sum_probs=21.2

Q ss_pred             CCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856         111 NRPCGKDALCSNVDGSYTCTCPPGFR  136 (136)
Q Consensus       111 ~~~~~~~~~c~~~~g~~~c~C~~g~~  136 (136)
                      ......++.|+++.++|.|.|+.||+
T Consensus         3 ~~NGgC~h~C~~~~~~~~C~C~~Gy~   28 (51)
T d1kigl_           3 LDNGGCDQFCREERSEVRCSCAHGYV   28 (51)
T ss_dssp             TTTTSSSSCCCEETTEECCCCCTTEE
T ss_pred             CCCCCcccEeEcCCCcEEeEcCCCCE
Confidence            34455678999999999999999983

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00011  Score=32.52  Aligned_cols=30  Identities=27%  Similarity=0.585  Sum_probs=23.0

Q ss_pred             CCCCCCCCCCCCeeee------cCCCeeEeCCCCCC
Q psy2856         107 DECVNRPCGKDALCSN------VDGSYTCTCPPGFR  136 (136)
Q Consensus       107 ~~c~~~~~~~~~~c~~------~~g~~~c~C~~g~~  136 (136)
                      +||......+++.|+.      +.++|.|.|+.||+
T Consensus         5 neC~~~NGGC~h~Cl~~p~~~n~~~~y~C~C~~G~~   40 (50)
T d1ijqa2           5 ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGML   40 (50)
T ss_dssp             SSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCE
T ss_pred             cccCCCCCCCcCccCCCcCcccCCCCEEEeCCCCCE
Confidence            4666666677899974      45799999999984

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.22  E-value=0.00021  Score=30.21  Aligned_cols=29  Identities=31%  Similarity=0.944  Sum_probs=24.2

Q ss_pred             CCCCCCCCCCCCeeeec-CCCeeEeCC-CCC
Q psy2856         107 DECVNRPCGKDALCSNV-DGSYTCTCP-PGF  135 (136)
Q Consensus       107 ~~c~~~~~~~~~~c~~~-~g~~~c~C~-~g~  135 (136)
                      ++|...+|.+++.|++. .++|.|.|+ +||
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy   32 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGF   32 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSE
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCc
Confidence            46888899999999875 678999996 577

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.00023  Score=28.47  Aligned_cols=28  Identities=54%  Similarity=1.282  Sum_probs=22.2

Q ss_pred             CCCCCC-CCCCCCeeeecCCCeeEeCCCCC
Q psy2856         107 DECVNR-PCGKDALCSNVDGSYTCTCPPGF  135 (136)
Q Consensus       107 ~~c~~~-~~~~~~~c~~~~g~~~c~C~~g~  135 (136)
                      +||+.. .|. ++.|.|..|+|.|.|..||
T Consensus         2 dECsignpCG-nGTCtNviGgFec~C~~GF   30 (39)
T d1emoa2           2 DECSVGNPCG-NGTCKNVIGGFECTCEEGF   30 (39)
T ss_dssp             CGGGTTCSSS-SSCEEECSSSEEECCSSSS
T ss_pred             CccccCCccC-CceeeecccceEEeecCCc
Confidence            456654 454 4789999999999999987

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.18  E-value=0.00068  Score=30.26  Aligned_cols=34  Identities=26%  Similarity=0.639  Sum_probs=26.5

Q ss_pred             CCCCCCCCCCCCCeeeeC--CCCeEeeCCCCCccCCC
Q psy2856          21 NECAHPNACGVNALCQNY--PGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~~--~g~~~C~c~~g~~~~~~   55 (136)
                      .+|. +++|.++++|...  ...|.|.|.+||.|..+
T Consensus         7 ~~c~-~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~C   42 (53)
T d3egfa_           7 PSSY-DGYCLNGGVCMHIESLDSYTCNCVIGYSGDRC   42 (53)
T ss_dssp             CTTS-SCCSCSSCEEEEESSSSCEEEECCTTCCSSSS
T ss_pred             CCCC-CCCCCCCcEeeccCCCCCeEeECCCCCcCCCC
Confidence            3444 3689999999754  35899999999999865

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.18  E-value=0.0003  Score=31.21  Aligned_cols=34  Identities=21%  Similarity=0.483  Sum_probs=28.8

Q ss_pred             CCeeeecCCCeeeeCCCCceeCCCCcceeeCCCC
Q psy2856          76 GARCTNFPGGYHCECPPGYHGDAFTTGCVDADEC  109 (136)
Q Consensus        76 ~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c  109 (136)
                      ...|++..+.+.|.|+.||.+......|.+++++
T Consensus         9 ~h~C~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~~   42 (51)
T d1kigl_           9 DQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             SSCCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             ccEeEcCCCcEEeEcCCCCEECCCCCccccCCcc
Confidence            3578888899999999999998887888888765

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.0012  Score=29.07  Aligned_cols=33  Identities=27%  Similarity=0.465  Sum_probs=27.8

Q ss_pred             CCeeeecCCCeeeeCCCCceeCCCCcceeeCCC
Q psy2856          76 GARCTNFPGGYHCECPPGYHGDAFTTGCVDADE  108 (136)
Q Consensus        76 ~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~  108 (136)
                      ...|++..+++.|.|..||.+......|.++++
T Consensus        10 ~~~C~~~~g~~~C~C~~Gy~L~~D~~tC~~~~~   42 (50)
T d1autl2          10 THYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK   42 (50)
T ss_dssp             SSEEEECSSSEEEECCTTEEECTTSSCEEECSS
T ss_pred             ccEeecCCCCeEEECCCCCEECCCCCccccCCC
Confidence            468999999999999999999887777876654

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.0005  Score=30.02  Aligned_cols=34  Identities=24%  Similarity=0.572  Sum_probs=26.4

Q ss_pred             CCCCCCCCCCCCCeeeeC--CCCeEeeCCCCCccCCC
Q psy2856          21 NECAHPNACGVNALCQNY--PGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        21 ~~c~~~~~~~~~~~C~~~--~g~~~C~c~~g~~~~~~   55 (136)
                      ++|. .++|.+++.|...  ...|.|.|..||.|..+
T Consensus         5 ~~c~-~~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~C   40 (48)
T d1nqlb_           5 PLSH-DGYCLHDGVCMYIEALDKYACNCVVGYIGERC   40 (48)
T ss_dssp             CSTT-CCEECTTCEEEEETTTTEEEEEECTTEESTTS
T ss_pred             CCCC-CCCCCCCcEEeeeCCCCCeEEeCCCCcccCCC
Confidence            3444 3689999999763  46799999999999765

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.0002  Score=33.29  Aligned_cols=32  Identities=31%  Similarity=0.668  Sum_probs=25.4

Q ss_pred             eeCCCCCCCCCCCCCeee-----ecCCCeeEeCCCCC
Q psy2856         104 VDADECVNRPCGKDALCS-----NVDGSYTCTCPPGF  135 (136)
Q Consensus       104 ~~~~~c~~~~~~~~~~c~-----~~~g~~~c~C~~g~  135 (136)
                      .+.++|.+..|.+++.|.     +..++|.|.|++||
T Consensus         4 ~~c~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy   40 (63)
T d1haea_           4 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGF   40 (63)
T ss_dssp             EECCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTE
T ss_pred             ccCCCCcCCcCCCCCEEeecccccCCCCEEeECCCCC
Confidence            355667777899999995     45678999999997

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.0012  Score=29.14  Aligned_cols=33  Identities=18%  Similarity=0.452  Sum_probs=27.8

Q ss_pred             CCeeeecCCCeeeeCCCCceeCCCCcceeeCCC
Q psy2856          76 GARCTNFPGGYHCECPPGYHGDAFTTGCVDADE  108 (136)
Q Consensus        76 ~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~  108 (136)
                      ...|.+..+++.|.|+.||.+......|.++++
T Consensus        11 ~h~C~n~~g~~~C~C~~Gy~L~~D~~tC~~~~~   43 (51)
T d2p3ua1          11 DQFCHEEQNSVVCSCARGYTLADNGKACIPTGP   43 (51)
T ss_dssp             SSEEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred             ccEeecCCCCeEeEcCCCCEECCCCCccccCCc
Confidence            468999999999999999999877777876654

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.47  E-value=0.0032  Score=27.96  Aligned_cols=29  Identities=28%  Similarity=0.704  Sum_probs=22.6

Q ss_pred             CCCCCCCCCCCeeeec--CCCeeEeCCCCCC
Q psy2856         108 ECVNRPCGKDALCSNV--DGSYTCTCPPGFR  136 (136)
Q Consensus       108 ~c~~~~~~~~~~c~~~--~g~~~c~C~~g~~  136 (136)
                      .|....|.+++.|+..  ...+.|.|++||.
T Consensus         8 ~c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~   38 (53)
T d3egfa_           8 SSYDGYCLNGGVCMHIESLDSYTCNCVIGYS   38 (53)
T ss_dssp             TTSSCCSCSSCEEEEESSSSCEEEECCTTCC
T ss_pred             CCCCCCCCCCcEeeccCCCCCeEeECCCCCc
Confidence            4556688888999753  4579999999984

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0015  Score=29.56  Aligned_cols=28  Identities=25%  Similarity=0.723  Sum_probs=21.2

Q ss_pred             CCCCCCCCCCeeeecCC-CeeEeCCCCCC
Q psy2856         109 CVNRPCGKDALCSNVDG-SYTCTCPPGFR  136 (136)
Q Consensus       109 c~~~~~~~~~~c~~~~g-~~~c~C~~g~~  136 (136)
                      |......+++.|+++.+ ++.|.|+.||.
T Consensus         3 C~~~NGgC~h~C~~~~~~~~~C~C~~Gy~   31 (57)
T d1rfnb_           3 CNIKNGRCEQFCKNSADNKVVCSCTEGYR   31 (57)
T ss_dssp             TTGGGGGCSSEEEECTTSCEEEECCTTEE
T ss_pred             cCCCCCCcccEeeeCCCCCeEeECCCCCE
Confidence            44445567799999864 78999999983

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0037  Score=27.39  Aligned_cols=25  Identities=24%  Similarity=0.464  Sum_probs=19.0

Q ss_pred             CCCeee------eCCCCeEeeCCCCCccCCC
Q psy2856          31 VNALCQ------NYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        31 ~~~~C~------~~~g~~~C~c~~g~~~~~~   55 (136)
                      ....|+      +..++|.|.|+.||.....
T Consensus        14 C~h~Cl~~p~~~n~~~~y~C~C~~G~~L~~D   44 (50)
T d1ijqa2          14 CQYLCLPAPQINPHSPKFTCACPDGMLLARD   44 (50)
T ss_dssp             CSSEEEECCCCSTTCCSEEEECCTTCEECTT
T ss_pred             CcCccCCCcCcccCCCCEEEeCCCCCEECCC
Confidence            357886      4457999999999987643

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.0019  Score=28.72  Aligned_cols=28  Identities=36%  Similarity=0.898  Sum_probs=20.7

Q ss_pred             CCCCCCCCCCeeeecCC-CeeEeCCCCCC
Q psy2856         109 CVNRPCGKDALCSNVDG-SYTCTCPPGFR  136 (136)
Q Consensus       109 c~~~~~~~~~~c~~~~g-~~~c~C~~g~~  136 (136)
                      |+.+...+++.|+++.+ .+.|.|+.||.
T Consensus         2 C~~~NGGC~h~C~~~~~~~~~C~C~~Gy~   30 (53)
T d2bz6l1           2 CVNENGGCEQYCSDHTGTKRSCRCHEGYS   30 (53)
T ss_dssp             TTSGGGGCSSEEEEETTTEEEEECCTTEE
T ss_pred             CCCCCCCCcCEeeeCCCCCEEeECCCCCE
Confidence            34444556789998876 47899999973

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.75  E-value=0.015  Score=26.12  Aligned_cols=33  Identities=24%  Similarity=0.438  Sum_probs=26.4

Q ss_pred             CCeeeecC-CCeeeeCCCCceeCCCCcceeeCCC
Q psy2856          76 GARCTNFP-GGYHCECPPGYHGDAFTTGCVDADE  108 (136)
Q Consensus        76 ~~~c~~~~-~~~~c~c~~g~~~~~~~~~~~~~~~  108 (136)
                      ...|+... +.+.|.|..||.+......|.++++
T Consensus        11 ~h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~   44 (57)
T d1rfnb_          11 EQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVP   44 (57)
T ss_dssp             SSEEEECTTSCEEEECCTTEEECTTSSSEEECSS
T ss_pred             ccEeeeCCCCCeEeECCCCCEECCCCCccccCCC
Confidence            46888875 4789999999999877777887664

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.24  E-value=0.0052  Score=26.64  Aligned_cols=29  Identities=24%  Similarity=0.618  Sum_probs=21.8

Q ss_pred             CCCCCCCCCCCeeeec--CCCeeEeCCCCCC
Q psy2856         108 ECVNRPCGKDALCSNV--DGSYTCTCPPGFR  136 (136)
Q Consensus       108 ~c~~~~~~~~~~c~~~--~g~~~c~C~~g~~  136 (136)
                      .|....|.+++.|+..  ..++.|.|++||.
T Consensus         6 ~c~~~~C~ngG~C~~~~~~~~~~C~C~~gy~   36 (48)
T d1nqlb_           6 LSHDGYCLHDGVCMYIEALDKYACNCVVGYI   36 (48)
T ss_dssp             STTCCEECTTCEEEEETTTTEEEEEECTTEE
T ss_pred             CCCCCCCCCCcEEeeeCCCCCeEEeCCCCcc
Confidence            4555678888999753  4679999999873

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.46  E-value=0.023  Score=24.24  Aligned_cols=28  Identities=29%  Similarity=0.530  Sum_probs=21.4

Q ss_pred             CCCCCCCeee--eCCCCeEeeCCCCCccCCC
Q psy2856          27 NACGVNALCQ--NYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        27 ~~~~~~~~C~--~~~g~~~C~c~~g~~~~~~   55 (136)
                      +.|.+ +.|.  .....+.|.|.+||.|..+
T Consensus        12 ~yC~n-G~C~~~~~~~~~~C~C~~gY~G~RC   41 (46)
T d1k36a_          12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRC   41 (46)
T ss_dssp             SSCSS-EEEEEETTTTEEEEEECTTCSSTTS
T ss_pred             CcCcC-CEEEEeCCCCccEeECCCCceecCc
Confidence            57887 6675  3446789999999999754

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.78  E-value=0.064  Score=23.57  Aligned_cols=32  Identities=25%  Similarity=0.513  Sum_probs=24.2

Q ss_pred             CCeeeecCC-CeeeeCCCCceeCCCCcceeeCC
Q psy2856          76 GARCTNFPG-GYHCECPPGYHGDAFTTGCVDAD  107 (136)
Q Consensus        76 ~~~c~~~~~-~~~c~c~~g~~~~~~~~~~~~~~  107 (136)
                      ...|+...+ .+.|.|..||.+......|....
T Consensus        10 ~h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~   42 (53)
T d2bz6l1          10 EQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTV   42 (53)
T ss_dssp             SSEEEEETTTEEEEECCTTEEECTTSSCEEECS
T ss_pred             cCEeeeCCCCCEEeECCCCCEECCCCCcccCCC
Confidence            467887765 57899999999887766676543

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.81  E-value=0.058  Score=23.40  Aligned_cols=29  Identities=21%  Similarity=0.364  Sum_probs=22.6

Q ss_pred             CCCCCCCeee-eCCCCeEeeCCCCCccCCC
Q psy2856          27 NACGVNALCQ-NYPGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        27 ~~~~~~~~C~-~~~g~~~C~c~~g~~~~~~   55 (136)
                      +.|.+++.|. ...+.+.|.|..||.|..+
T Consensus        14 ~yC~nGgcc~~~~~~~~~C~C~~gy~G~rC   43 (50)
T d1ioxa_          14 HYCIKGRCRFVVAEQTPSCVCDEGYIGARC   43 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTEETTTT
T ss_pred             CCccCCeEEEeCCCCCcEeECCCCCeeCCC
Confidence            4688888885 3446789999999999754

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.41  E-value=0.11  Score=22.43  Aligned_cols=29  Identities=21%  Similarity=0.390  Sum_probs=21.8

Q ss_pred             CCCCCCCeeeeC-CCCeEeeCCCCCccCCC
Q psy2856          27 NACGVNALCQNY-PGNYTCSCQPGYTGNPF   55 (136)
Q Consensus        27 ~~~~~~~~C~~~-~g~~~C~c~~g~~~~~~   55 (136)
                      +.|.+++.|... ...+.|.|..||.|..+
T Consensus        13 ~yClnGgcc~~~~~~~~~C~C~~gy~G~RC   42 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKPACVCHSGYVGARC   42 (49)
T ss_dssp             CSSTTEEEEEETTTTEEEEEECTTEESTTS
T ss_pred             CEeeCCeEEecCCCCCcEeECCCCCEecCC
Confidence            468877777433 46789999999999764

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.83  E-value=0.46  Score=19.28  Aligned_cols=28  Identities=36%  Similarity=0.982  Sum_probs=18.0

Q ss_pred             CCCCCCCCCCCCCeeeec-CCCeeEeCCCCC
Q psy2856         106 ADECVNRPCGKDALCSNV-DGSYTCTCPPGF  135 (136)
Q Consensus       106 ~~~c~~~~~~~~~~c~~~-~g~~~c~C~~g~  135 (136)
                      +|.|-...|  +..|... .++|+|.|..||
T Consensus         4 vDPCf~~~C--E~qCqP~~~~~Y~CiCaeGF   32 (43)
T d1dx5i1           4 VDPCFRANC--EYQCQPLDQTSYLCVCAEGF   32 (43)
T ss_dssp             CCGGGGCCC--SSEEEECSSSCEEEECCTTE
T ss_pred             cccccCCCc--ceeeeeCCCCcceEEecccc
Confidence            344544444  3566544 468999999987