Psyllid ID: psy2958

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
Protein Sequence
MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFVKVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNETGRGRSDLFPEPSSSNRPPNFLLCIL
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHcccccHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEcccccccccEEEEEcEcccccHHHHHHHHHccccccEEEEccccccccccccccccccccccccEEEEEccccccccccccccEEEEccccccccccccccccccccccccccccccccEEEcc
Coil and Loop (DISEMBL)
mqrvckchgmsgscsvkvcwkrlpsfQQVGDILASRYEGAYFVKQVGDILASRYEGAYFVKVVNNQRKRNVKRLRSAVrdakqpnrtelvymeespdycqrnetgrgrsdlfpepsssnrppnfllcil
Flexible Loop (DISEMBL)
mqrvckchgmsgscsvkVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYfvkvvnnqrkrnvkrlrsavrdakqpnrtelvymeespdycqrnETGRGRSdlfpepsssnrppnfllcil
Low Complexity Region (SEG)
MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFvkvvnnqrkrnvkrLRSAVRDAKQPNRTELVYMEESPDYCQRNETGRGRSDLFPEPSSSNRPPNFLLCIL
Disordered region (IsUnstruct)
***VCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFVKVVNN****************************************************************
Disordered Region (DISOPRED)
MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVK*************************************KQPNRTELVYMEESPDYCQRNETGRGRSDLFPEPSSSNRPPNFLLCIL
Disordered Region (DISEMBL)
***********GSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFVKVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNETGRGR***********RPPNFLLCIL
Disordered Region (DISPRO)
**RVCKC*GMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGD******************RKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNETGRGRSDLFPEPSSSNRPPNFLLCIL
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFVKVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNETGRGRSDLFPEPSSSNRPPNFLLCIL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	129	2.2.26 [Sep-21-2011]
P49340	392	Protein Wnt-1 OS=Bombyx m	N/A	N/A	0.767	0.252	0.466	3e-16
P28094	223	Protein Wnt-1 (Fragment)	no	N/A	0.790	0.457	0.373	9e-16
P56706	349	Protein Wnt-7b OS=Homo sa	yes	N/A	0.666	0.246	0.411	2e-14
P21551	369	Protein Wnt-1 OS=Ambystom	N/A	N/A	0.689	0.241	0.392	5e-14
P24257	370	Protein Wnt-1 OS=Danio re	yes	N/A	0.689	0.240	0.417	5e-14
P28047	349	Protein Wnt-7b OS=Mus mus	yes	N/A	0.666	0.246	0.401	6e-14
Q3L254	349	Protein Wnt-7b OS=Gallus	yes	N/A	0.682	0.252	0.365	8e-14
P28465	352	Protein Wnt-2 OS=Drosophi	yes	N/A	0.705	0.258	0.417	1e-13
P31289	135	Protein Wnt-7b (Fragment)	N/A	N/A	0.651	0.622	0.38	2e-13
P04426	370	Proto-oncogene Wnt-1 OS=M	no	N/A	0.666	0.232	0.383	2e-13

>sp|P49340|WNT1_BOMMO Protein Wnt-1 OS=Bombyx mori GN=WNT-1 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 6/105 (5%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFV---KQVGDILASRYEGA 57
           M++ CKCHGMSGSC+VK CW RLPSF+ VGD L  R++GA  V   K   +  A R E A
Sbjct: 223 MKQECKCHGMSGSCTVKTCWMRLPSFRSVGDSLKDRFDGASRVMLSKADVETPAQRNEAA 282

Query: 58  YFVKVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRN 102
              +V    R R   +LR    D K P   +LVY+E SP +C++N
Sbjct: 283 PH-RVPRKDRYRF--QLRPHNPDHKSPGVKDLVYLESSPGFCEKN 324

Ligand for members of the frizzled family of seven transmembrane receptors.
Bombyx mori (taxid: 7091)

>sp|P28094|WNT1_STRPU Protein Wnt-1 (Fragment) OS=Strongylocentrotus purpuratus GN=WNT-1 PE=2 SV=2

 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 21/123 (17%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           M+R CKCHGMSGSC+++ CW RLP+F+ VG+++  R++GA  V    D   S  E     
Sbjct: 68  MRRECKCHGMSGSCTIETCWMRLPTFRTVGELIKERFDGASRVTMRNDGSPSDRETESSF 127

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNETGRGRSDLFPEPSSSNR 120
              N                 KQP   +LVY E SPD+C+RN       D F  P +  R
Sbjct: 128 VPYNPSH--------------KQPASRDLVYFENSPDFCERN-------DKFGTPGTRGR 166

Query: 121 PPN 123
             N
Sbjct: 167 ECN 169

Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule important in CNS development. Is likely to signal over only few cell diameters.

Strongylocentrotus purpuratus (taxid: 7668)

>sp|P56706|WNT7B_HUMAN Protein Wnt-7b OS=Homo sapiens GN=WNT7B PE=1 SV=2

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 16/102 (15%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           MQ  CKCHG+SGSC+ K CW  LP F++VG +L  +Y  A    QV  + ASR     F+
Sbjct: 196 MQLECKCHGVSGSCTTKTCWTTLPKFREVGHLLKEKYNAAV---QVEVVRASRLRQPTFL 252

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRN 102
           +         +K+LRS     ++P  T+LVY+E+SP+YC+ +
Sbjct: 253 R---------IKQLRS----YQKPMETDLVYIEKSPNYCEED 281

Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters.

Homo sapiens (taxid: 9606)

>sp|P21551|WNT1_AMBME Protein Wnt-1 OS=Ambystoma mexicanum GN=WNT-1 PE=1 SV=1

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 13/102 (12%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           M++ CKCHGMSGSC+V+ CW RLP+F+ VGD L  R++GA  V              Y  
Sbjct: 213 MKQECKCHGMSGSCAVRTCWMRLPTFRAVGDFLKDRFDGASRV-------------IYGN 259

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRN 102
           K  N   +     L       K P+  +LVY E+SP++C  N
Sbjct: 260 KGSNRASRVQTHHLEPENPTHKPPSPQDLVYFEKSPNFCTYN 301

Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule important in CNS development. Is likely to signal over only few cell diameters.

Ambystoma mexicanum (taxid: 8296)

>sp|P24257|WNT1_DANRE Protein Wnt-1 OS=Danio rerio GN=wnt1 PE=2 SV=1

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 56/103 (54%), Gaps = 14/103 (13%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           MQ+ CKCHGMSGSC+V+ CW RLPSF+ VGD L  R++GA  V              Y  
Sbjct: 213 MQQECKCHGMSGSCTVRTCWMRLPSFRLVGDYLKDRFDGASRV-------------VYAN 259

Query: 61  KVVNNQRKR-NVKRLRSAVRDAKQPNRTELVYMEESPDYCQRN 102
           K  N    R + + L       K P+  +LVY E+SP++C  N
Sbjct: 260 KGSNRASHRADPRHLEPENPAHKLPSSRDLVYFEKSPNFCSYN 302

Ligand for members of the frizzled family of seven transmembrane receptors. Involved in neurogenesis. Performs a partially redundant function with wnt10b in the formation of the midbrain-hindbrain boundary (MHB) organizer. In the hindbrain, mediates lateral inhibition of boundary cell specification, probably via up-regulation of proneural and Delta gene expression in non-boundary cells; localized expression of wnt1 in boundary cells is maintained via rfng-mediated modulation of Notch activity.

Danio rerio (taxid: 7955)

>sp|P28047|WNT7B_MOUSE Protein Wnt-7b OS=Mus musculus GN=Wnt7b PE=1 SV=1

 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 16/102 (15%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           M+  CKCHG+SGSC+ K CW  LP F++VG +L  +Y  A    QV  + ASR     F+
Sbjct: 196 MKLECKCHGVSGSCTTKTCWTTLPKFREVGHLLKEKYNAAV---QVEVVRASRLRQPTFL 252

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRN 102
           +         +K+LRS     ++P  T+LVY+E+SP+YC+ +
Sbjct: 253 R---------IKQLRS----YQKPMETDLVYIEKSPNYCEED 281

Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters.

Mus musculus (taxid: 10090)

>sp|Q3L254|WNT7B_CHICK Protein Wnt-7b OS=Gallus gallus GN=WNT7B PE=2 SV=1

 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 16/104 (15%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           M+  CKCHG+SGSC+ K CW  LP F+++G IL  +Y  A    QV  + ASR     F+
Sbjct: 196 MKLECKCHGVSGSCTTKTCWTTLPKFREIGYILKEKYNAAV---QVEVVRASRLRQPTFL 252

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNET 104
           K+               ++  ++P  T+LVY+E+SP+YC+ + +
Sbjct: 253 KI-------------KQIKSYQKPMETDLVYIEKSPNYCEEDAS 283

Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters.

Gallus gallus (taxid: 9031)

>sp|P28465|WNT2_DROME Protein Wnt-2 OS=Drosophila melanogaster GN=Wnt2 PE=2 SV=2

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 12/103 (11%)

Query: 5   CKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFVKVVN 64
           CKCHG+SGSC +K CWK LP F+ VGD L  +Y+ A  V+ V        +G   +++V 
Sbjct: 196 CKCHGVSGSCVMKTCWKSLPPFRLVGDRLMLKYQKAKTVQAV--------KGKRGLRLVL 247

Query: 65  NQRKR-NVKRLRSAVRDAKQPNRTELVYMEESPDYCQRN-ETG 105
           +++K     R +  V D   P R EL+Y+E SP+YC+R+ +TG
Sbjct: 248 SRKKHAGTARAQKPVLD--WPKRMELIYLEASPNYCERSLQTG 288

Binds as a ligand to a family of frizzled seven-transmembrane receptors and acts through a cascade of genes on the nucleus. Segment polarity protein. May function in gonadogenesis and limb development. Wg and Wnt2 have a role in the developing trachea and together are responsible for all dorsal trunk formation.

Drosophila melanogaster (taxid: 7227)

>sp|P31289|WNT7B_XENLA Protein Wnt-7b (Fragment) OS=Xenopus laevis GN=wnt7b PE=2 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 16/100 (16%)

Query: 5   CKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFVKVVN 64
           CKCHG+SGSC+ K CW  LP F+++G +L  +Y  A  V+ V    A+R     F+K+  
Sbjct: 3   CKCHGVSGSCTTKTCWNTLPKFREIGFVLKEKYNDAVHVEVV---RANRLRQPTFLKI-- 57

Query: 65  NQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNET 104
                        VR  ++P  T+LVY+E SP+YC+ + T
Sbjct: 58  -----------KKVRSYQKPMETDLVYIERSPNYCEEDST 86

Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters.

Xenopus laevis (taxid: 8355)

>sp|P04426|WNT1_MOUSE Proto-oncogene Wnt-1 OS=Mus musculus GN=Wnt1 PE=1 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 13/99 (13%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           M++ CKCHGMSGSC+V+ CW RLP+ + VGD+L  R++GA  V              Y  
Sbjct: 214 MRQECKCHGMSGSCTVRTCWMRLPTLRAVGDVLRDRFDGASRV-------------LYGN 260

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYC 99
           +  N   +  + RL       K P+  +LVY E+SP++C
Sbjct: 261 RGSNRASRAELLRLEPEDPAHKPPSPHDLVYFEKSPNFC 299

Ligand for members of the frizzled family of seven transmembrane receptors. In some developmental processes, is also a ligand for the coreceptor RYK, thus triggering Wnt signaling. Probable developmental protein. May be a signaling molecule important in CNS development. Is likely to signal over only few cell diameters. Proeminent role in the induction of the mesencephalon and cerebellum. May play a crucial role in the morphogenesis of the neural tube and/or the early stages of CNS development.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
378940489	295	WntA signaling ligand, partial [Heliconi	0.666	0.291	0.533	2e-23
378940491	295	WntA signaling ligand, partial [Heliconi	0.666	0.291	0.533	2e-23
378940481	295	WntA signaling ligand, partial [Heliconi	0.666	0.291	0.524	5e-23
357616621	357	putative protein Wnt-4 precursor [Danaus	0.666	0.240	0.524	6e-23
378940495	295	WntA signaling ligand, partial [Heliconi	0.666	0.291	0.524	1e-22
242004464	329	protein Wnt-4 precursor, putative [Pedic	0.666	0.261	0.509	7e-22
91086553	545	PREDICTED: similar to AGAP008678-PA [Tri	0.651	0.154	0.461	7e-20
270011065	373	hypothetical protein TcasGA2_TC009738 [T	0.651	0.225	0.471	2e-19
332019247	335	Protein Wnt-4 [Acromyrmex echinatior]	0.666	0.256	0.538	2e-18
193657466	350	PREDICTED: protein Wnt-5a-like [Acyrthos	0.666	0.245	0.471	2e-18

>gi|378940489|gb|AFC75683.1| WntA signaling ligand, partial [Heliconius erato petiverana]

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 70/103 (67%), Gaps = 17/103 (16%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           MQRVCKCHGMSGSCSV+VCW+RLP  + VGD L +                 RYEGA  V
Sbjct: 143 MQRVCKCHGMSGSCSVRVCWRRLPQLRVVGDALTT-----------------RYEGASHV 185

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNE 103
           KVV  +R +N+++LR    D K+PN+T+LVY+E+SPDYC+ NE
Sbjct: 186 KVVERKRGKNIRKLRPIHMDMKKPNKTDLVYLEDSPDYCEPNE 228

Source: Heliconius erato petiverana

Species: Heliconius erato

Genus: Heliconius

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|378940491|gb|AFC75684.1| WntA signaling ligand, partial [Heliconius erato lativitta] gi|378940493|gb|AFC75685.1| WntA signaling ligand, partial [Heliconius erato notabilis]

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 70/103 (67%), Gaps = 17/103 (16%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           MQRVCKCHGMSGSCSV+VCW+RLP  + VGD L +                 RYEGA  V
Sbjct: 143 MQRVCKCHGMSGSCSVRVCWRRLPQLRVVGDALTT-----------------RYEGASHV 185

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNE 103
           KVV  +R +N+++LR    D K+PN+T+LVY+E+SPDYC+ NE
Sbjct: 186 KVVERKRGKNIRKLRPIHMDMKKPNKTDLVYLEDSPDYCEPNE 228

Source: Heliconius erato lativitta

Species: Heliconius erato

Genus: Heliconius

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|378940481|gb|AFC75679.1| WntA signaling ligand, partial [Heliconius melpomene melpomene] gi|378940483|gb|AFC75680.1| WntA signaling ligand, partial [Heliconius melpomene malleti] gi|378940485|gb|AFC75681.1| WntA signaling ligand, partial [Heliconius cydno galanthus] gi|378940487|gb|AFC75682.1| WntA signaling ligand, partial [Heliconius cydno alithea]

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 17/103 (16%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           MQRVCKCHGMSGSCSV+VCW+RLP  + VGD L +                 RYEGA  V
Sbjct: 143 MQRVCKCHGMSGSCSVRVCWRRLPQLRVVGDALTT-----------------RYEGASHV 185

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNE 103
           KVV  +R +N+++LR    D K+PN+T+LVY+E+SPDYC+ N+
Sbjct: 186 KVVERKRGKNIRKLRPIHMDMKKPNKTDLVYLEDSPDYCEPND 228

Source: Heliconius melpomene melpomene

Species: Heliconius melpomene

Genus: Heliconius

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357616621|gb|EHJ70289.1| putative protein Wnt-4 precursor [Danaus plexippus]

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 17/103 (16%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           MQRVCKCHGMSGSCSV+VCW+RLP  + V D L++                 RYEGA  V
Sbjct: 205 MQRVCKCHGMSGSCSVRVCWRRLPPLRAVADALST-----------------RYEGASHV 247

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNE 103
           KVV  ++ +N+++LR    D K+PN+T+LVY+EESPDYC+ NE
Sbjct: 248 KVVERKKGKNIRKLRPIHPDMKKPNKTDLVYLEESPDYCEPNE 290

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|378940495|gb|AFC75686.1| WntA signaling ligand, partial [Heliconius himera]

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 69/103 (66%), Gaps = 17/103 (16%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           MQRVCKCHGMSGSCSV+VCW+RLP  + VGD L +                 RYEGA  V
Sbjct: 143 MQRVCKCHGMSGSCSVRVCWRRLPQLRVVGDALTT-----------------RYEGASHV 185

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNE 103
           KVV  +R +N+++LR    D K+PN+T+LVY+E+SPDYC+  E
Sbjct: 186 KVVERKRGKNIRKLRPIHMDMKKPNKTDLVYLEDSPDYCEPKE 228

Source: Heliconius himera

Species: Heliconius himera

Genus: Heliconius

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242004464|ref|XP_002423103.1| protein Wnt-4 precursor, putative [Pediculus humanus corporis] gi|212506049|gb|EEB10365.1| protein Wnt-4 precursor, putative [Pediculus humanus corporis]

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 53/104 (50%), Positives = 73/104 (70%), Gaps = 18/104 (17%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           MQRVCKCHGMSGSCS++VCW++LPSF+ VGD L +R+EGA  VK V              
Sbjct: 178 MQRVCKCHGMSGSCSIRVCWRKLPSFRTVGDALLARFEGASHVKLV-------------- 223

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNET 104
                ++++ +K+LR+  +D K PN+T+LVY++ESPDYC+ NET
Sbjct: 224 ----EKKRKKIKKLRAVSKDLKPPNKTDLVYLQESPDYCEHNET 263

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91086553|ref|XP_972893.1| PREDICTED: similar to AGAP008678-PA [Tribolium castaneum]

 Score =  102 bits (253), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 20/104 (19%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           M R CKCHG+SGSCS+++CW+RLP F++VGD L  RYEGA  VK V              
Sbjct: 396 MVRTCKCHGVSGSCSMQICWRRLPPFRKVGDALFQRYEGASHVKFV-------------- 441

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNET 104
                  ++  K+L++   D K+PN+T+LVY+++SPDYC++NET
Sbjct: 442 ------ERKWRKKLKAISADLKKPNKTDLVYLDDSPDYCEKNET 479

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270011065|gb|EFA07513.1| hypothetical protein TcasGA2_TC009738 [Tribolium castaneum]

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/104 (47%), Positives = 70/104 (67%), Gaps = 20/104 (19%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           M R CKCHG+SGSCS+++CW+RLP F++VGD L  RYEGA  VK              FV
Sbjct: 224 MVRTCKCHGVSGSCSMQICWRRLPPFRKVGDALFQRYEGASHVK--------------FV 269

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNET 104
           +      ++  K+L++   D K+PN+T+LVY+++SPDYC++NET
Sbjct: 270 E------RKWRKKLKAISADLKKPNKTDLVYLDDSPDYCEKNET 307

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332019247|gb|EGI59756.1| Protein Wnt-4 [Acromyrmex echinatior]

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/104 (53%), Positives = 68/104 (65%), Gaps = 18/104 (17%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           MQRVCKCHGMSGSCSV+VCW+RLPSF+  G  LA+ +EGA  V+     LA R       
Sbjct: 248 MQRVCKCHGMSGSCSVRVCWRRLPSFRVAGVALAALHEGAALVR-----LAQRG------ 296

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNET 104
                   R   RLR A  D K+PN+T+LVY+E+SPDYC+RN T
Sbjct: 297 -------GRRPARLRPARPDLKRPNKTDLVYLEDSPDYCERNLT 333

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193657466|ref|XP_001947400.1| PREDICTED: protein Wnt-5a-like [Acyrthosiphon pisum]

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 18/104 (17%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           MQ+VCKCHGMSGSCSV++CW +L SF+ +GD L  RYEGA  V+                
Sbjct: 203 MQKVCKCHGMSGSCSVRICWMKLSSFRDIGDSLMVRYEGASHVR---------------- 246

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNET 104
             +  ++++ +K+LR    D K PN+TELVY++ SPDYC+RNE+
Sbjct: 247 --LGEKKRKKIKKLRPIRMDRKTPNKTELVYLDTSPDYCERNES 288

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
UNIPROTKB|Q9PVT4	155	WNT10A "Protein Wnt" [Gallus g	0.341	0.283	0.5	7.2e-15
UNIPROTKB|P10108	371	wnt1 "Protein Wnt-1" [Xenopus	0.310	0.107	0.625	1.1e-14
FB|FBgn0004009	468	wg "wingless" [Drosophila mela	0.403	0.111	0.5	1.1e-14
UNIPROTKB|I3L790	139	WNT10A "Protein Wnt" [Sus scro	0.341	0.316	0.5	4.9e-14
UNIPROTKB|F1NZU5	291	WNT10A "Protein Wnt" [Gallus g	0.341	0.151	0.5	6.9e-14
ZFIN|ZDB-GENE-980526-87	380	wnt5b "wingless-type MMTV inte	0.279	0.094	0.555	9.5e-14
UNIPROTKB|Q9U6V0	360	wnt5 "Protein Wnt" [Ciona inte	0.310	0.111	0.525	1.2e-13
UNIPROTKB|Q06443	357	WNT-5B "Protein Wnt-5b" [Ambys	0.279	0.100	0.583	1.2e-13
ZFIN|ZDB-GENE-980526-526	375	wnt1 "wingless-type MMTV integ	0.891	0.306	0.387	1.5e-13
UNIPROTKB|F1MK64	240	F1MK64 "Protein Wnt" [Bos taur	0.333	0.179	0.488	1.5e-13

UNIPROTKB|Q9PVT4 WNT10A "Protein Wnt" [Gallus gallus (taxid:9031)]

 Score = 137 (53.3 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query:     1 MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVK 44
             M+R CKCHG SGSC +K CW+  P F+ VG +L  R+ GA  ++
Sbjct:     6 MRRKCKCHGTSGSCQLKTCWQVTPEFRLVGSLLKDRFYGATLIR 49

GO:0005102 "receptor binding" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0010628 "positive regulation of gene expression" evidence=IEA

GO:0014033 "neural crest cell differentiation" evidence=IEA

GO:0031069 "hair follicle morphogenesis" evidence=IEA

GO:0042476 "odontogenesis" evidence=IEA

GO:0042487 "regulation of odontogenesis of dentin-containing tooth" evidence=IEA

GO:0043586 "tongue development" evidence=IEA

GO:0043588 "skin development" evidence=IEA

GO:0048733 "sebaceous gland development" evidence=IEA

GO:0071560 "cellular response to transforming growth factor beta stimulus" evidence=IEA

UNIPROTKB|P10108 wnt1 "Protein Wnt-1" [Xenopus laevis (taxid:8355)]

 Score = 156 (60.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
 Identities = 25/40 (62%), Positives = 32/40 (80%)

Query:     1 MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGA 40
             M++ CKCHGMSGSCS++ CW RLP F+ VGD L  R++GA
Sbjct:   214 MRQECKCHGMSGSCSLRTCWMRLPPFRSVGDALKDRFDGA 253

GO:0014036 "neural crest cell fate specification" evidence=TAS

GO:0021797 "forebrain anterior/posterior pattern specification" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IPI

FB|FBgn0004009 wg "wingless" [Drosophila melanogaster (taxid:7227)]

 Score = 152 (58.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
 Identities = 26/52 (50%), Positives = 38/52 (73%)

Query:     1 MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILAS 52
             M++ CKCHGMSGSC+VK CW RL +F+ +GD L +R++GA  V+    + A+
Sbjct:   229 MRQECKCHGMSGSCTVKTCWMRLANFRVIGDNLKARFDGATRVQVTNSLRAT 280

GO:0007448 "anterior/posterior pattern specification, imaginal disc" evidence=IMP

GO:0007450 "dorsal/ventral pattern formation, imaginal disc" evidence=IMP;TAS

GO:0035224 "genital disc anterior/posterior pattern formation" evidence=IEP

GO:0009986 "cell surface" evidence=IDA

GO:0005110 "frizzled-2 binding" evidence=IGI;IDA;IPI

GO:0007223 "Wnt receptor signaling pathway, calcium modulating pathway" evidence=IGI;IDA

GO:0003136 "negative regulation of heart induction by canonical Wnt receptor signaling pathway" evidence=IMP

GO:0060914 "heart formation" evidence=IMP

GO:0043499 "eukaryotic cell surface binding" evidence=IDA

GO:0050840 "extracellular matrix binding" evidence=IDA

GO:0005615 "extracellular space" evidence=IDA

GO:0005539 "glycosaminoglycan binding" evidence=IDA

GO:0060070 "canonical Wnt receptor signaling pathway" evidence=IGI;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0008595 "anterior/posterior axis specification, embryo" evidence=NAS;TAS

GO:0007479 "leg disc proximal/distal pattern formation" evidence=NAS;TAS

GO:0061382 "Malpighian tubule tip cell differentiation" evidence=IMP

GO:0061331 "epithelial cell proliferation involved in Malpighian tubule morphogenesis" evidence=IMP

GO:0016055 "Wnt receptor signaling pathway" evidence=NAS

GO:0005576 "extracellular region" evidence=IDA;NAS;TAS

GO:0005102 "receptor binding" evidence=NAS

GO:0042326 "negative regulation of phosphorylation" evidence=NAS

GO:0005515 "protein binding" evidence=IPI

GO:0007446 "imaginal disc growth" evidence=TAS

GO:0007447 "imaginal disc pattern formation" evidence=TAS

GO:0035311 "wing cell fate specification" evidence=IMP

GO:0008544 "epidermis development" evidence=IMP

GO:0048754 "branching morphogenesis of an epithelial tube" evidence=IMP

GO:0035153 "epithelial cell type specification, open tracheal system" evidence=IMP

GO:0035147 "branch fusion, open tracheal system" evidence=IMP

GO:0007498 "mesoderm development" evidence=IMP

GO:0007507 "heart development" evidence=IMP

GO:0007398 "ectoderm development" evidence=IMP

GO:0007523 "larval visceral muscle development" evidence=IMP

GO:0007442 "hindgut morphogenesis" evidence=IMP

GO:0035263 "genital disc sexually dimorphic development" evidence=IMP

GO:0042127 "regulation of cell proliferation" evidence=NAS

GO:0035215 "genital disc development" evidence=TAS

GO:0016015 "morphogen activity" evidence=TAS

GO:0043066 "negative regulation of apoptotic process" evidence=TAS

GO:0016318 "ommatidial rotation" evidence=TAS

GO:0005112 "Notch binding" evidence=TAS

GO:0048749 "compound eye development" evidence=TAS

GO:0007391 "dorsal closure" evidence=IMP

GO:0007394 "dorsal closure, elongation of leading edge cells" evidence=IMP

GO:0030032 "lamellipodium assembly" evidence=IMP

GO:0051017 "actin filament bundle assembly" evidence=IMP

GO:0046847 "filopodium assembly" evidence=IMP

GO:0007419 "ventral cord development" evidence=TAS

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=NAS

GO:0048190 "wing disc dorsal/ventral pattern formation" evidence=TAS

GO:0002168 "instar larval development" evidence=TAS

GO:0030707 "ovarian follicle cell development" evidence=IMP

GO:0007346 "regulation of mitotic cell cycle" evidence=TAS

GO:0001745 "compound eye morphogenesis" evidence=IMP

GO:0007423 "sensory organ development" evidence=TAS

GO:0045121 "membrane raft" evidence=IDA

GO:0007367 "segment polarity determination" evidence=IMP;TAS

GO:0035290 "trunk segmentation" evidence=TAS

GO:0035289 "posterior head segmentation" evidence=TAS

GO:0035288 "anterior head segmentation" evidence=TAS

GO:0046672 "positive regulation of compound eye retinal cell programmed cell death" evidence=IMP

GO:0010002 "cardioblast differentiation" evidence=IMP

GO:0048542 "lymph gland development" evidence=IMP

GO:0061320 "pericardial nephrocyte differentiation" evidence=IMP

GO:0035217 "labial disc development" evidence=IMP

GO:0035225 "determination of genital disc primordium" evidence=IMP

GO:0035277 "spiracle morphogenesis, open tracheal system" evidence=IMP

GO:0048332 "mesoderm morphogenesis" evidence=IMP

GO:0005770 "late endosome" evidence=IDA

GO:0005769 "early endosome" evidence=IDA

GO:0007418 "ventral midline development" evidence=IMP

GO:0009996 "negative regulation of cell fate specification" evidence=IMP

GO:0007444 "imaginal disc development" evidence=IMP

GO:0030139 "endocytic vesicle" evidence=IDA

GO:0035017 "cuticle pattern formation" evidence=IMP

GO:0061332 "Malpighian tubule bud morphogenesis" evidence=IMP

GO:0061328 "posterior Malpighian tubule development" evidence=IMP

GO:0048728 "proboscis development" evidence=IMP

GO:0048076 "regulation of compound eye pigmentation" evidence=IMP

GO:0005771 "multivesicular body" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0072091 "regulation of stem cell proliferation" evidence=IMP

GO:0014019 "neuroblast development" evidence=IMP

GO:0035220 "wing disc development" evidence=IGI

GO:0008284 "positive regulation of cell proliferation" evidence=IGI;IMP

GO:0045611 "negative regulation of hemocyte differentiation" evidence=IMP

GO:0042691 "positive regulation of crystal cell differentiation" evidence=IMP

GO:0035167 "larval lymph gland hemopoiesis" evidence=IMP

GO:0035170 "lymph gland crystal cell differentiation" evidence=IMP

GO:0032876 "negative regulation of DNA endoreduplication" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IMP

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IBA

GO:0045599 "negative regulation of fat cell differentiation" evidence=IBA

GO:0035019 "somatic stem cell maintenance" evidence=IBA

GO:0009798 "axis specification" evidence=IBA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IBA

GO:0030917 "midbrain-hindbrain boundary development" evidence=IBA

UNIPROTKB|I3L790 WNT10A "Protein Wnt" [Sus scrofa (taxid:9823)]

 Score = 134 (52.2 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query:     1 MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVK 44
             M+R CKCHG SGSC +K CW+  P F+ VG +L SR+  A  ++
Sbjct:     8 MRRKCKCHGTSGSCQLKTCWQVTPEFRAVGALLRSRFHRATLIR 51

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0071560 "cellular response to transforming growth factor beta stimulus" evidence=IEA

GO:0048733 "sebaceous gland development" evidence=IEA

GO:0043588 "skin development" evidence=IEA

GO:0043586 "tongue development" evidence=IEA

GO:0042487 "regulation of odontogenesis of dentin-containing tooth" evidence=IEA

GO:0042476 "odontogenesis" evidence=IEA

GO:0031069 "hair follicle morphogenesis" evidence=IEA

GO:0014033 "neural crest cell differentiation" evidence=IEA

GO:0010628 "positive regulation of gene expression" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

UNIPROTKB|F1NZU5 WNT10A "Protein Wnt" [Gallus gallus (taxid:9031)]

 Score = 137 (53.3 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query:     1 MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVK 44
             M+R CKCHG SGSC +K CW+  P F+ VG +L  R+ GA  ++
Sbjct:   142 MRRKCKCHGTSGSCQLKTCWQVTPEFRLVGSLLKDRFYGATLIR 185

GO:0005102 "receptor binding" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

ZFIN|ZDB-GENE-980526-87 wnt5b "wingless-type MMTV integration site family, member 5b" [Danio rerio (taxid:7955)]

 Score = 131 (51.2 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query:     5 CKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGA 40
             CKCHG+SGSCS+K CW +L  F++VG+ L  +Y+ A
Sbjct:   238 CKCHGVSGSCSLKTCWLQLADFRRVGEFLKEKYDSA 273

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA;IPI

GO:0005576 "extracellular region" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0060027 "convergent extension involved in gastrulation" evidence=IGI;IMP

GO:0042074 "cell migration involved in gastrulation" evidence=IGI;IMP

GO:0031101 "fin regeneration" evidence=IMP

GO:0009950 "dorsal/ventral axis specification" evidence=IBA

GO:0005615 "extracellular space" evidence=IBA

GO:0045600 "positive regulation of fat cell differentiation" evidence=IBA

GO:0005886 "plasma membrane" evidence=IBA

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IBA

GO:0009952 "anterior/posterior pattern specification" evidence=IBA

GO:0005110 "frizzled-2 binding" evidence=IBA

GO:0060541 "respiratory system development" evidence=IBA

GO:0010172 "embryonic body morphogenesis" evidence=IMP

GO:0001501 "skeletal system development" evidence=IMP

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0060028 "convergent extension involved in axis elongation" evidence=IGI;IMP

GO:0007223 "Wnt receptor signaling pathway, calcium modulating pathway" evidence=IGI;IDA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IDA

GO:0060030 "dorsal convergence" evidence=IMP

GO:0008591 "regulation of Wnt receptor signaling pathway, calcium modulating pathway" evidence=IGI;IMP

GO:0061053 "somite development" evidence=IGI

GO:0048884 "neuromast development" evidence=IMP

GO:0048840 "otolith development" evidence=IMP

GO:0002574 "thrombocyte differentiation" evidence=IMP

GO:0001525 "angiogenesis" evidence=IMP

GO:0002062 "chondrocyte differentiation" evidence=IMP

GO:0031018 "endocrine pancreas development" evidence=IMP

GO:0001667 "ameboidal cell migration" evidence=IMP

GO:0060026 "convergent extension" evidence=IGI

UNIPROTKB|Q9U6V0 wnt5 "Protein Wnt" [Ciona intestinalis (taxid:7719)]

 Score = 136 (52.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 21/40 (52%), Positives = 30/40 (75%)

Query:     5 CKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVK 44
             CKCHG+SGSCS+K CW ++P F+++GD L  +Y G   V+
Sbjct:   219 CKCHGVSGSCSLKTCWMQVPGFREIGDELMRKYIGGVEVR 258

GO:0005110 "frizzled-2 binding" evidence=ISS

GO:0005615 "extracellular space" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0009950 "dorsal/ventral axis specification" evidence=ISS

GO:0009952 "anterior/posterior pattern specification" evidence=ISS

GO:0060070 "canonical Wnt receptor signaling pathway" evidence=ISS

GO:0060541 "respiratory system development" evidence=ISS

UNIPROTKB|Q06443 WNT-5B "Protein Wnt-5b" [Ambystoma mexicanum (taxid:8296)]

 Score = 132 (51.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query:     5 CKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGA 40
             CKCHG+SGSCS+K CW +L  F++VGD L  +Y+ A
Sbjct:   215 CKCHGVSGSCSLKTCWLQLADFRKVGDHLKEKYDSA 250

GO:0005102 "receptor binding" evidence=ISS

GO:0016055 "Wnt receptor signaling pathway" evidence=ISS

GO:0030335 "positive regulation of cell migration" evidence=ISS

ZFIN|ZDB-GENE-980526-526 wnt1 "wingless-type MMTV integration site family, member 1" [Danio rerio (taxid:7955)]

 Score = 182 (69.1 bits), Expect = 1.5e-13, P = 1.5e-13
 Identities = 50/129 (38%), Positives = 66/129 (51%)

Query:     1 MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFX 60
             MQ+ CKCHGMSGSC+V+ CW RLPSF+ VGD L  R++GA  V     + A++  G+   
Sbjct:   218 MQQECKCHGMSGSCTVRTCWMRLPSFRLVGDYLKDRFDGASRV-----VYANK--GS--- 267

Query:    61 XXXXXXXXXXXXXLRSAVRDAKQPNRTELVYMEESPDYCQRN-ETG-RGRSDLFPEPSSS 118
                          L       K P+  +LVY E+SP++C  N +TG  G S      SS 
Sbjct:   268 --NRASHRADPRHLEPENPAHKLPSSRDLVYFEKSPNFCSYNGKTGTHGTSGRTCNSSSP 325

Query:   119 NRPPNFLLC 127
                   LLC
Sbjct:   326 ALDGCELLC 334

GO:0005102 "receptor binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0022004 "midbrain-hindbrain boundary maturation during brain development" evidence=IBA

GO:0048332 "mesoderm morphogenesis" evidence=IBA

GO:0007223 "Wnt receptor signaling pathway, calcium modulating pathway" evidence=IBA

GO:0033077 "T cell differentiation in thymus" evidence=IBA

GO:0005110 "frizzled-2 binding" evidence=IBA

GO:0021797 "forebrain anterior/posterior pattern specification" evidence=IBA

GO:0009798 "axis specification" evidence=IBA

GO:0048664 "neuron fate determination" evidence=IBA

GO:0021536 "diencephalon development" evidence=IBA

GO:0060070 "canonical Wnt receptor signaling pathway" evidence=IBA

GO:0045599 "negative regulation of fat cell differentiation" evidence=IBA

GO:0005615 "extracellular space" evidence=IBA

GO:0071425 "hematopoietic stem cell proliferation" evidence=IBA

GO:0030901 "midbrain development" evidence=IBA

GO:0009880 "embryonic pattern specification" evidence=IBA

GO:0005770 "late endosome" evidence=IBA

GO:0005769 "early endosome" evidence=IBA

GO:0008284 "positive regulation of cell proliferation" evidence=IBA

GO:0042472 "inner ear morphogenesis" evidence=IBA

GO:0070365 "hepatocyte differentiation" evidence=IBA

GO:0005886 "plasma membrane" evidence=IBA

GO:0045121 "membrane raft" evidence=IBA

GO:0021587 "cerebellum morphogenesis" evidence=IMP

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0035284 "brain segmentation" evidence=IMP

GO:0030902 "hindbrain development" evidence=IMP

GO:0021592 "fourth ventricle development" evidence=IMP

GO:0030917 "midbrain-hindbrain boundary development" evidence=IGI

GO:0030154 "cell differentiation" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

UNIPROTKB|F1MK64 F1MK64 "Protein Wnt" [Bos taurus (taxid:9913)]

 Score = 128 (50.1 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
 Identities = 21/43 (48%), Positives = 28/43 (65%)

Query:     1 MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFV 43
             ++R CKCHG SGSC +K CW+  P F+ VG  L  R + A F+
Sbjct:    94 LKRKCKCHGTSGSCQLKTCWRAPPEFRAVGAALRERLDRAIFI 136

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0071425 "hematopoietic stem cell proliferation" evidence=IEA

GO:0071374 "cellular response to parathyroid hormone stimulus" evidence=IEA

GO:0071320 "cellular response to cAMP" evidence=IEA

GO:0061196 "fungiform papilla development" evidence=IEA

GO:0060346 "bone trabecula formation" evidence=IEA

GO:0060070 "canonical Wnt receptor signaling pathway" evidence=IEA

GO:0051885 "positive regulation of anagen" evidence=IEA

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0050909 "sensory perception of taste" evidence=IEA

GO:0050821 "protein stabilization" evidence=IEA

GO:0050680 "negative regulation of epithelial cell proliferation" evidence=IEA

GO:0048741 "skeletal muscle fiber development" evidence=IEA

GO:0048641 "regulation of skeletal muscle tissue development" evidence=IEA

GO:0045899 "positive regulation of RNA polymerase II transcriptional preinitiation complex assembly" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0045599 "negative regulation of fat cell differentiation" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

GO:0032434 "regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0030858 "positive regulation of epithelial cell differentiation" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0014835 "myoblast cell differentiation involved in skeletal muscle regeneration" evidence=IEA

GO:0010971 "positive regulation of G2/M transition of mitotic cell cycle" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0007224 "smoothened signaling pathway" evidence=IEA

GO:0007050 "cell cycle arrest" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0002062 "chondrocyte differentiation" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	129
pfam00110	308	pfam00110, wnt, wnt family	1e-30
smart00097	305	smart00097, WNT1, found in Wnt-1	8e-26

>gnl|CDD|215724 pfam00110, wnt, wnt family

 Score =  110 bits (278), Expect = 1e-30
 Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 25/113 (22%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           M+  CKCHG+SGSC++K CWK+LP F++VGD+L  +Y+GA                    
Sbjct: 159 MKTECKCHGVSGSCTLKTCWKQLPDFREVGDLLKEKYDGA-------------------- 198

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNETG-----RGR 108
             V    +   +RL      +K P  T+LVY+E+SPDYC+RN +      RGR
Sbjct: 199 IKVEVNNRGKRRRLVRKNPKSKPPTSTDLVYLEDSPDYCERNPSLGSLGTRGR 251

Wnt genes have been identified in vertebrates and invertebrates but not in plants, unicellular eukaryotes or prokaryotes. In humans, 19 WNT proteins are known. Because of their insolubility little is known about Wnt protein structure, but all have 23 or 24 Cys residues whose spacing is highly conserved. Signal transduction by Wnt proteins (including the Wnt/beta-catenin, the Wnt/Ca++, and the Wnt/polarity pathway) is mediated by receptors of the Frizzled and LDL-receptor-related protein (LRP) families. Length = 308

>gnl|CDD|128408 smart00097, WNT1, found in Wnt-1

 Score = 98.2 bits (245), Expect = 8e-26
 Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 20/104 (19%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           M+R CKCHG+SGSC+VK CW +LP F++VGD L  +Y+GA                    
Sbjct: 156 MKRECKCHGVSGSCTVKTCWLQLPDFRKVGDYLKEKYDGA-------------------S 196

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNET 104
           +V  ++R  N K         K P  T+LVY+E SPD+C++N  
Sbjct: 197 EVEVDKRGTN-KAPVPKNSTFKPPTETDLVYLESSPDFCEKNPK 239

Length = 305

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	129
KOG3913|consensus	356		100.0
smart00097	305	WNT1 found in Wnt-1.	100.0
PF00110	310	wnt: wnt family; InterPro: IPR005817 Wnt proteins	99.98

>KOG3913|consensus

Probab=100.00  E-value=2.2e-37  Score=256.84  Aligned_cols=100  Identities=47%  Similarity=0.898  Sum_probs=84.6

Q ss_pred             CceeeeeccccCcccchhhcccCCChHHHHHHHHHhhcccceeeeecchhhccccccccceecccccccccccccccccc
Q psy2958           1 MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFVKVVNNQRKRNVKRLRSAVRD   80 (129)
Q Consensus         1 m~~~CKCHGvSGSC~~KTCW~~lp~Fr~IG~~Lk~kY~~A~~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~p~~~~   80 (129)
                      |+++||||||||||++||||++||+|++||+.||+|||+|++|...+.                  ..+....+.+.+..
T Consensus       205 m~~~CKCHGvSGSC~~KTCW~~lp~Fr~vG~~Lk~KYd~A~~V~~~~~------------------~~~~~~~~~~~~~~  266 (356)
T KOG3913|consen  205 MRRECKCHGVSGSCTVKTCWKQLPDFREVGDYLKEKYDGAIKVTVNNR------------------GRRSAPALRPEKPR  266 (356)
T ss_pred             hhhcccccCccccchhhhHHhhCccHHHHHHHHHHHhhhheEEeeccC------------------Cccccccccccccc
Confidence            789999999999999999999999999999999999999999988531                  11111225566677


Q ss_pred             CCCCCCCCeEEecCCCCCcccCCC-----CCCcccCCCCCCCC
Q psy2958          81 AKQPNRTELVYMEESPDYCQRNET-----GRGRSDLFPEPSSS  118 (129)
Q Consensus        81 ~~~p~~~dLVYle~SPdYC~~n~~-----~~~~~~~~~~~~~~  118 (129)
                      +++|...||||||+|||||++|+.     +.||.|+.+.+.+.
T Consensus       267 ~~~~~~~dLVYle~SPdfC~~~~~~Gs~GT~GR~Cn~ts~g~d  309 (356)
T KOG3913|consen  267 FKPPTETDLVYLEDSPDYCERNKKTGSLGTQGRECNKTSRGSD  309 (356)
T ss_pred             cCCCCCCceEEecCCChhhccCccCCCCCCCCcccCCCCCCCC
Confidence            788999999999999999999998     77999998776553

>smart00097 WNT1 found in Wnt-1

Probab=100.00  E-value=3.3e-35  Score=240.75  Aligned_cols=102  Identities=40%  Similarity=0.738  Sum_probs=82.0

Q ss_pred             CceeeeeccccCcccchhhcccCCChHHHHHHHHHhhcccceeeeecchhhccccccccceecccccccccccccccccc
Q psy2958           1 MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFVKVVNNQRKRNVKRLRSAVRD   80 (129)
Q Consensus         1 m~~~CKCHGvSGSC~~KTCW~~lp~Fr~IG~~Lk~kY~~A~~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~p~~~~   80 (129)
                      |+++||||||||||++||||++||+|++||+.||+||++|++|...+                    .+....+.|.+..
T Consensus       156 ~~~~CkCHGvSGSC~~kTCw~~l~~Fr~Ig~~Lk~kY~~A~~V~~~~--------------------~~~~~~l~~~~~~  215 (305)
T smart00097      156 MKRECKCHGVSGSCTVKTCWLQLPDFRKVGDYLKEKYDGASEVEVDK--------------------RGTNKAPVPKNST  215 (305)
T ss_pred             HHHhccccCccCCccccchHhhCCCHHHHHHHHHHHhccceEeeecc--------------------cccccccccCCcc
Confidence            67899999999999999999999999999999999999999997642                    1211224455555


Q ss_pred             CCCCCCCCeEEecCCCCCcccCCCC-----CCcccCCCCCCCCCCCCc
Q psy2958          81 AKQPNRTELVYMEESPDYCQRNETG-----RGRSDLFPEPSSSNRPPN  123 (129)
Q Consensus        81 ~~~p~~~dLVYle~SPdYC~~n~~~-----~~~~~~~~~~~~~~~~~~  123 (129)
                      .++|+.+||||||+|||||++|+..     .||+|+.+.+. .+.|-.
T Consensus       216 ~~~~~~~dLVYle~SPdyC~~n~~~G~~GT~GR~Cn~~s~~-~~~C~~  262 (305)
T smart00097      216 FKPPTETDLVYLESSPDFCEKNPKTGSLGTQGRQCNKTSKG-LDGCDL  262 (305)
T ss_pred             CCCCCCCCeEEeCCCCcccccCCCcCCCCCCCCccCCCCCC-CCChhh
Confidence            5778999999999999999999884     69999866432 344443

>PF00110 wnt: wnt family; InterPro: IPR005817 Wnt proteins constitute a large family of secreted molecules that are involved in intercellular signalling during development

Probab=99.98  E-value=9e-34  Score=232.50  Aligned_cols=95  Identities=42%  Similarity=0.863  Sum_probs=55.0

Q ss_pred             CceeeeeccccCcccchhhcccCCChHHHHHHHHHhhcccceeeeecchhhccccccccceecccccccccccccc-ccc
Q psy2958           1 MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFVKVVNNQRKRNVKRLRS-AVR   79 (129)
Q Consensus         1 m~~~CKCHGvSGSC~~KTCW~~lp~Fr~IG~~Lk~kY~~A~~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~p-~~~   79 (129)
                      |+++||||||||||++||||++||+|++||+.||+||++|++|...+.                    +......+ ...
T Consensus       160 ~~~~CkCHGvSGSC~~ktCw~~l~~f~~Ig~~Lk~kY~~A~~v~~~~~--------------------~~~~~~~~~~~~  219 (310)
T PF00110_consen  160 MKKKCKCHGVSGSCTVKTCWRSLPPFREIGDYLKEKYDSAVKVKPNNN--------------------GNRSKPSPRKNK  219 (310)
T ss_dssp             -EEEEEE-SGGG-TTSEEEEEE---HHHHHHHHHHHHHT-EE-------------------------------------H
T ss_pred             ccceEccccccCCCcceEEEEcCCcHHHHHHHHHHHhhcccccccccc--------------------cccccccccccc
Confidence            689999999999999999999999999999999999999999987531                    11111111 122


Q ss_pred             cCCCCCCCCeEEecCCCCCcccCCC-----CCCcccCCCCC
Q psy2958          80 DAKQPNRTELVYMEESPDYCQRNET-----GRGRSDLFPEP  115 (129)
Q Consensus        80 ~~~~p~~~dLVYle~SPdYC~~n~~-----~~~~~~~~~~~  115 (129)
                      ..+++..+||||+|+|||||++|+.     +.||.|..+.+
T Consensus       220 ~~~~~~~~~LvY~~~SPdyC~~d~~~G~~GT~GR~C~~~~~  260 (310)
T PF00110_consen  220 RFKPPTSTDLVYLEKSPDYCEPDPSTGSLGTRGRECNKTSS  260 (310)
T ss_dssp             HHHTS-SSS-EE-S----TTSEETTTTEE-STT-EE----T
T ss_pred             ccCCCCCceEEEECCCCcceeeccccccCcccccccCCCCC
Confidence            3457889999999999999999987     67999987754

The name derives from the first 2 members of the family to be discovered: int-1 (mouse) and wingless (Drosophila) []. It is now recognised that Wnt signalling controls many cell fate decisions in a variety of different organisms, including mammals []. Wnt signalling has been implicated in tumourigenesis, early mesodermal patterning of the embryo, morphogenesis of the brain and kidneys, regulation of mammary gland proliferation and Alzheimer's disease [, ]. Wnt-mediated signalling is believed to proceed initially through binding to cell surface receptors of the frizzled family; the signal is subsequently transduced through several cytoplasmic components to B-catenin, which enters the nucleus and activates the transcription of several genes important in development []. Several non-canonical Wnt signalling pathways have also been elucidated that act independently of B-catenin. Canonical and noncanonical Wnt signaling branches are highly interconnected, and cross-regulate each other []. Members of the Wnt gene family are defined by their sequence similarity to mouse Wnt-1 and Wingless in Drosophila. They encode proteins of ~350-400 residues in length, with orthologues identified in several, mostly vertebrate, species. Very little is known about the structure of Wnts as they are notoriously insoluble, but they share the following features characteristics of secretory proteins: a signal peptide, several potential N-glycosylation sites and 22 conserved cysteines [] that are probably involved in disulphide bonds. The Wnt proteins seem to adhere to the plasma membrane of the secreting cells and are therefore likely to signal over only few cell diameters. Fifteen major Wnt gene families have been identified in vertebrates, with multiple subtypes within some classes. In humans, 19 Wnt proteins have been identified that share 27% to 83% amino-acid sequence identity and a conserved pattern of 23 or 24 cysteine residues []. Wnt genes are highly conserved between vertebrate species sharing overall sequence identity and gene structure, and are slightly less conserved between vertebrates and invertebrates.; GO: 0005102 receptor binding, 0007275 multicellular organismal development, 0016055 Wnt receptor signaling pathway, 0005576 extracellular region; PDB: 4F0A_B.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	129
4f0a_B	316	Crystal Structure Of Xwnt8 In Complex With The Cyst		7e-11

>pdb|4F0A|B Chain B, Crystal Structure Of Xwnt8 In Complex With The Cysteine-Rich Domain Of Frizzled 8 Length = 316

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 17/103 (16%)
Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFX 60
           M+R CKCHG+SGSCS++ CW +L  F+ +G+ L  +++ A  ++     + S        
Sbjct: 155 MKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMDKRKMRS-------- 206
Query: 61  XXXXXXXXXXXXXLRSAVRDA-KQPNRTELVYMEESPDYCQRN 102
                         R A+ DA      +EL+++E+SPDYC +N
Sbjct: 207 --------GNSADNRGAIADAFSSVAGSELIFLEDSPDYCLKN 241

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	129
4f0a_B	316	Protein WNT-8, XWNT-8; WNT signaling, ligand-recep	1e-18

>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Length = 316

 Score = 78.9 bits (193), Expect = 1e-18
 Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 15/104 (14%)

Query: 1   MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFV 60
           M+R CKCHG+SGSCS++ CW +L  F+ +G+ L  +++ A  ++               +
Sbjct: 155 MKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLE---------------M 199

Query: 61  KVVNNQRKRNVKRLRSAVRDAKQPNRTELVYMEESPDYCQRNET 104
                +   +     +          +EL+++E+SPDYC +N +
Sbjct: 200 DKRKMRSGNSADNRGAIADAFSSVAGSELIFLEDSPDYCLKNIS 243

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	129
4f0a_B	316	Protein WNT-8, XWNT-8; WNT signaling, ligand-recep	100.0

>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis}

Probab=100.00  E-value=6.3e-37  Score=250.74  Aligned_cols=100  Identities=33%  Similarity=0.681  Sum_probs=77.5

Q ss_pred             CceeeeeccccCcccchhhcccCCChHHHHHHHHHhhcccceeeeecchhhccccccccceecccccccc-ccccccccc
Q psy2958           1 MQRVCKCHGMSGSCSVKVCWKRLPSFQQVGDILASRYEGAYFVKQVGDILASRYEGAYFVKVVNNQRKRN-VKRLRSAVR   79 (129)
Q Consensus         1 m~~~CKCHGvSGSC~~KTCW~~lp~Fr~IG~~Lk~kY~~A~~V~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~l~p~~~   79 (129)
                      |+++||||||||||++||||++||+|++||+.||+|||+|++|.+.+..+                ..++ ...+.+...
T Consensus       155 m~~~CKCHGvSGSCt~KTCW~~lp~Fr~VG~~LK~kyd~A~~V~~~~~~~----------------~~~~~~~~~~~~~~  218 (316)
T 4f0a_B          155 MKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMDKRKM----------------RSGNSADNRGAIAD  218 (316)
T ss_dssp             CEEEEEECSGGGCTTSEEEEEECCCHHHHHHHHHHHHHTCEECCC-----------------------------CHHHHH
T ss_pred             CeeeeecCCccccccceehcccCCCHHHHHHHHHHHhhhheEeeeccccc----------------cccccccccccccc
Confidence            78999999999999999999999999999999999999999997743100                0011 011122223


Q ss_pred             cCCCCCCCCeEEecCCCCCcccCCC-----CCCcccCCCCCC
Q psy2958          80 DAKQPNRTELVYMEESPDYCQRNET-----GRGRSDLFPEPS  116 (129)
Q Consensus        80 ~~~~p~~~dLVYle~SPdYC~~n~~-----~~~~~~~~~~~~  116 (129)
                      .+++|+.+||||||+|||||++|++     +.||.|+.+...
T Consensus       219 ~~k~p~~~dLVYle~SPdfC~~n~~~Gs~GT~GR~Cn~tS~g  260 (316)
T 4f0a_B          219 AFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKN  260 (316)
T ss_dssp             HHHTSCSSSCEECSCCCCTTSEETTTTEECSTTCEECCCCTT
T ss_pred             ccCCCCCCCeEEeCCCCcccccCCCCCCCCCCCcccCCCCCC
Confidence            3467889999999999999999998     789999987653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	129
d1gl1i_	34	Protease inhibitor PMP-C {Migratory locust (Locust	83.64

>d1gl1i_ g.4.1.1 (I:) Protease inhibitor PMP-C {Migratory locust (Locusta migratoria) [TaxId: 7004]}

class: Small proteins
fold: PMP inhibitors
superfamily: PMP inhibitors
family: PMP inhibitors
domain: Protease inhibitor PMP-C
species: Migratory locust (Locusta migratoria) [TaxId: 7004]

Probab=83.64  E-value=0.13  Score=27.15  Aligned_cols=16  Identities=44%  Similarity=1.346  Sum_probs=13.9

Q ss_pred             eeee--ccccCcccchhh
Q psy2958           4 VCKC--HGMSGSCSVKVC   19 (129)
Q Consensus         4 ~CKC--HGvSGSC~~KTC   19 (129)
                      .|+|  .|-|++|++|.|
T Consensus        15 tcrc~s~gksaactlkac   32 (34)
T d1gl1i_          15 TCRCGADGKSAACTLKAC   32 (34)
T ss_dssp             EEEECTTSSCEEEECCCC
T ss_pred             eeeecCCCcccceeeccC
Confidence            5777  799999999988