Psyllid ID: psy2974

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180------
Protein Sequence
MNRLDPRIEDKCNNCNESPHDTLTVFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTDIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSKEFSEIDDDDEDEDNTDLNSRRGNYL
Secondary Structure (PSIPRED)
cccccccccEEccccccccEEEcccEEEccccccccEEcccccccccccEEEEEEcccEEEEcccccEEcccccccEEccccccccccccEEEcccccccccccccccEEEEccccEEEEcccccEEEcccccEEEEcccccEEccccccEEEcccccccccccccccccccccccccccccEEEc
Secondary Structure Prediction (SSPRO)
cccccccEEEEccccEEEEcccccHHHcccEEEEEEEcccccccccccccEEEcccccEEEEccccEEEccccccccEHccccEEEccccEEEcccccccccccccEEEEEEEccccEEEEccccEEccccEEEEEEEEccccccccEEEEEEEccccccccccccccccccccccEccEEccccc
Coil and Loop (DISEMBL)
mnrldpriedkcnncnesphdtLTVFSKIgdsfksqdkdecmtnnggcqhecRNTIgsyicschngytllenghdckeggckyeitapngviktpnhpdyypskreciwhftttpghriklnptdiisisegllvrfrsddtvvgkgfSASYIAIdtqgskefseiddddededntdlnsrrgnyl
Flexible Loop (DISEMBL)
mnrldpriedkcnncnesphdtLTVFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEItapngviktpnHPDYYPSKRECIWHFTttpghriklnpTDIISISEGLLVRFRSDDTVVGKGFsasyiaidtqgskefseiddddededntdlnsrrgnyl
Low Complexity Region (SEG)
MNRLDPRIEDKCNNCNESPHDTLTVFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTDIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSKEFSEIddddededNTDLNSRRGNYL
Disordered region (IsUnstruct)
************************VF**************CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTDIISISEGLLVRFRSDDTVVGKGFSASYIAID******************************
Disordered Region (DISOPRED)
****DPRIEDKCNNCNESPHDTLTVFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTDIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSKEFSEIDDDDEDEDNTDLNSRRGNYL
Disordered Region (DISEMBL)
MNRLDPRIEDKCNNCNESPHDTLTVFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTDIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSKEF***********************
Disordered Region (DISPRO)
*NRLDPRIEDKCNNCNESPHDTLTVFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTDIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSKEFSEIDDDDEDEDNTDLNSRRGNYL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNRLDPRIEDKCNNCNESPHDTLTVFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTDIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSKEFSEIDDDDEDEDNTDLNSRRGNYL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	186	2.2.26 [Sep-21-2011]
Q9WVM6	1012	Tolloid-like protein 2 OS	yes	N/A	0.612	0.112	0.407	9e-30
Q9DER7	1008	Tolloid-like protein 1 OS	yes	N/A	0.623	0.115	0.409	9e-30
Q8JI28	1007	Tolloid-like protein 1 OS	N/A	N/A	0.623	0.115	0.409	1e-29
Q9Y6L7	1015	Tolloid-like protein 2 OS	yes	N/A	0.612	0.112	0.414	1e-29
O43897	1013	Tolloid-like protein 1 OS	no	N/A	0.736	0.135	0.385	2e-29
O57460	1022	Dorsal-ventral patterning	no	N/A	0.736	0.134	0.391	6e-29
O57382	1019	Tolloid-like protein 2 OS	N/A	N/A	0.623	0.113	0.396	9e-29
P25723	1067	Dorsal-ventral patterning	no	N/A	0.478	0.083	0.611	4e-28
P98063	991	Bone morphogenetic protei	no	N/A	0.623	0.117	0.389	5e-28
P13497	986	Bone morphogenetic protei	no	N/A	0.623	0.117	0.389	8e-28

>sp|Q9WVM6|TLL2_MOUSE Tolloid-like protein 2 OS=Mus musculus GN=Tll2 PE=1 SV=1

 Score =  129 bits (325), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 81/152 (53%), Gaps = 38/152 (25%)

Query: 37  DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
           DKDEC  +NGGCQ EC NT GSY+C C NGY L ENGHDCKE GC Y+I++  G + +PN
Sbjct: 729 DKDECAKDNGGCQQECVNTFGSYLCRCRNGYRLHENGHDCKEAGCAYKISSAEGTLMSPN 788

Query: 97  HPDYYPSKRECIWHFTTTPGHRIKL----------------------------------- 121
            PD YPS++EC W+ ++T GHR+K+                                   
Sbjct: 789 WPDKYPSRKECTWNISSTAGHRVKITFSEFEIEQHQECAYDHLELYDGTDSLAPILGRFC 848

Query: 122 ---NPTDIISISEGLLVRFRSDDTVVGKGFSA 150
               P  +++    L +RF SD +V  KGF A
Sbjct: 849 GSKKPDPVVATGSSLFLRFYSDASVQRKGFQA 880

Protease which specifically processes pro-lysyl oxidase. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: -

>sp|Q9DER7|TLL1_CHICK Tolloid-like protein 1 OS=Gallus gallus GN=TLL1 PE=2 SV=1

 Score =  129 bits (325), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 83/154 (53%), Gaps = 38/154 (24%)

Query: 37  DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
           DKDEC  +NGGCQHEC NT+GSY+C C NG+ L EN HDCKE  C+ +I +PNG+I +PN
Sbjct: 725 DKDECSKDNGGCQHECINTVGSYVCQCRNGFVLHENKHDCKEAECEQKIHSPNGIIMSPN 784

Query: 97  HPDYYPSKRECIWHFTTTPGHRIKLN---------------------------------- 122
            PD YPS++EC W  + TPG R+KL                                   
Sbjct: 785 WPDKYPSRKECTWEISATPGQRVKLTFNEFEIEQHQECAYDHLEVFDGESEKSPILGRLC 844

Query: 123 ----PTDIISISEGLLVRFRSDDTVVGKGFSASY 152
               P  +I+    + +RF SD +V  KGF A++
Sbjct: 845 GSKIPEPLIATGNKMFLRFISDASVQRKGFQATH 878

Protease which processes procollagen C-propeptides, such as chordin, probiglycan and prolysyl oxidase. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.

Gallus gallus (taxid: 9031)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|Q8JI28|TLL1_XENLA Tolloid-like protein 1 OS=Xenopus laevis GN=tll1 PE=1 SV=1

 Score =  129 bits (324), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 84/154 (54%), Gaps = 38/154 (24%)

Query: 37  DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
           DKDEC  +NGGCQHEC NTIGSY+C C NG+ L +N HDCKE  C++ I + NGVI +PN
Sbjct: 725 DKDECSKDNGGCQHECINTIGSYVCQCRNGFVLHDNKHDCKEAECEHRIHSSNGVITSPN 784

Query: 97  HPDYYPSKRECIWHFTTTPGHRIKLN---------------------------------- 122
            PD YPS++EC W  + TPGHR+KL+                                  
Sbjct: 785 WPDKYPSRKECTWEISATPGHRVKLSFSEFEIEQHQECAYDHLEVFDGETEKSSILGRLC 844

Query: 123 ----PTDIISISEGLLVRFRSDDTVVGKGFSASY 152
               P  +++    + +RF SD +V  KGF A++
Sbjct: 845 GSKVPEPLVATGNEMFIRFVSDASVQRKGFQATH 878

Protease which processes procollagen C-propeptides, such as chordin. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|Q9Y6L7|TLL2_HUMAN Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=1 SV=1

 Score =  129 bits (324), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 81/152 (53%), Gaps = 38/152 (25%)

Query: 37  DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
           DKDEC  +NGGCQHEC NT GSY+C C NGY L ENGHDCKE GC ++I++  G + +PN
Sbjct: 732 DKDECAKDNGGCQHECVNTFGSYLCRCRNGYWLHENGHDCKEAGCAHKISSVEGTLASPN 791

Query: 97  HPDYYPSKRECIWHFTTTPGHRIKL----------------------------------- 121
            PD YPS+REC W+ ++T GHR+KL                                   
Sbjct: 792 WPDKYPSRRECTWNISSTAGHRVKLTFNEFEIEQHQECAYDHLEMYDGPDSLAPILGRFC 851

Query: 122 ---NPTDIISISEGLLVRFRSDDTVVGKGFSA 150
               P   ++    + +RF SD +V  KGF A
Sbjct: 852 GSKKPDPTVASGSSMFLRFYSDASVQRKGFQA 883

Protease which specifically processes pro-lysyl oxidase. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|O43897|TLL1_HUMAN Tolloid-like protein 1 OS=Homo sapiens GN=TLL1 PE=1 SV=1

 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 94/184 (51%), Gaps = 47/184 (25%)

Query: 7   RIEDKCNNCNESPHDTLTVFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNG 66
           RIE K +N         TV  K   +    DKDEC  +NGGCQHEC NT+GSY+C C NG
Sbjct: 709 RIEFKSDN---------TVSKKGFKAHFFSDKDECSKDNGGCQHECVNTMGSYMCQCRNG 759

Query: 67  YTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN---- 122
           + L +N HDCKE  C+ +I +P+G+I +PN PD YPS++EC W  + TPGHRIKL     
Sbjct: 760 FVLHDNKHDCKEAECEQKIHSPSGLITSPNWPDKYPSRKECTWEISATPGHRIKLAFSEF 819

Query: 123 ----------------------------------PTDIISISEGLLVRFRSDDTVVGKGF 148
                                             P  +++    + VRF SD +V  KGF
Sbjct: 820 EIEQHQECAYDHLEVFDGETEKSPILGRLCGNKIPDPLVATGNKMFVRFVSDASVQRKGF 879

Query: 149 SASY 152
            A++
Sbjct: 880 QATH 883

Protease which processes procollagen C-propeptides, such as chordin, pro-biglycan and pro-lysyl oxidase. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|O57460|TLL1_DANRE Dorsal-ventral patterning tolloid-like protein 1 OS=Danio rerio GN=tll1 PE=2 SV=1

 Score =  127 bits (318), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 93/184 (50%), Gaps = 47/184 (25%)

Query: 7   RIEDKCNNCNESPHDTLTVFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNG 66
           RIE K +N         TV  K   +    DKDEC  +NGGCQHEC NTIGSY+C C NG
Sbjct: 718 RIEFKSDN---------TVSKKGFKAHFFSDKDECSKDNGGCQHECINTIGSYVCQCRNG 768

Query: 67  YTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN---- 122
           + L EN HDCKE  C+++I +  G I +PN PD YPS++EC W  T TPGHR+K++    
Sbjct: 769 FILHENKHDCKEAECEHKIHSTTGTISSPNWPDKYPSRKECTWDITATPGHRVKISFNEF 828

Query: 123 ----------------------------------PTDIISISEGLLVRFRSDDTVVGKGF 148
                                             P  +IS    + +RF SD +V  KGF
Sbjct: 829 EIEQHQECAYDHLEAFDGDSDKTPILSRLCGNKIPEPLISTGNKMYLRFISDASVQRKGF 888

Query: 149 SASY 152
            A++
Sbjct: 889 QATH 892

Required for patterning ventral tissues of the tail. May increase bone morphogenetic protein (BMP) activity at the end of gastrulation by proteolytic cleavage of chordin and release of BMP from inactive complexes.

Danio rerio (taxid: 7955)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|O57382|TLL2_XENLA Tolloid-like protein 2 OS=Xenopus laevis GN=tll2 PE=2 SV=1

 Score =  126 bits (316), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 81/154 (52%), Gaps = 38/154 (24%)

Query: 37  DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
           DKDEC  +NGGCQH+C NT GSYIC C NG+ L ENGHDCKE GC+ ++    G I +PN
Sbjct: 735 DKDECSKDNGGCQHDCVNTFGSYICQCKNGFILHENGHDCKEAGCEQKLLNAEGTISSPN 794

Query: 97  HPDYYPSKRECIWHFTTTPGHRIKL----------------------------------- 121
            P+ YPS++EC W  + T GHR+KL                                   
Sbjct: 795 WPEKYPSRKECTWDISVTAGHRVKLVFTDFEIEQHQECAYDHLELYDGPNGKAAILGRFC 854

Query: 122 ---NPTDIISISEGLLVRFRSDDTVVGKGFSASY 152
               P+ +++ +  + +RF SD +V  KGF A Y
Sbjct: 855 GSKEPSPVVASTNNMFLRFYSDASVQRKGFQAKY 888

Protease which specifically processes prolysyl oxidase and maybe also chordin. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis. In embryos, inhibits the development of dorsoanterior structures and ventralizes activin-induced dorsal mesoderm in animal caps.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|P25723|TLD_DROME Dorsal-ventral patterning protein tolloid OS=Drosophila melanogaster GN=tld PE=2 SV=2

 Score =  124 bits (310), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 55/90 (61%), Positives = 63/90 (70%)

Query: 37  DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
           D DEC  NNGGCQH CRNT GSY CSC NGYTL ENGH+C E  CK+EIT   GV+++PN
Sbjct: 753 DVDECSMNNGGCQHRCRNTFGSYQCSCRNGYTLAENGHNCTETRCKFEITTSYGVLQSPN 812

Query: 97  HPDYYPSKRECIWHFTTTPGHRIKLNPTDI 126
           +P+ YP    C WHF T  GHRI+L   D 
Sbjct: 813 YPEDYPRNIYCYWHFQTVLGHRIQLTFHDF 842

Required for normal dorsal development. TLD may interact physically with DPP-C protein.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: -

>sp|P98063|BMP1_MOUSE Bone morphogenetic protein 1 OS=Mus musculus GN=Bmp1 PE=1 SV=2

 Score =  123 bits (309), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 38/154 (24%)

Query: 37  DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
           DKDEC  +NGGCQ +C NT GSY C C +G+ L +N HDCKE GC++++T+ +G I +PN
Sbjct: 708 DKDECSKDNGGCQQDCVNTFGSYECQCRSGFVLHDNKHDCKEAGCEHKVTSTSGTITSPN 767

Query: 97  HPDYYPSKRECIWHFTTTPGHRIKL----------------------------------- 121
            PD YPSK+EC W  ++TPGHR+KL                                   
Sbjct: 768 WPDKYPSKKECTWAISSTPGHRVKLTFVEMDIESQPECAYDHLEVFDGRDAKAPVLGRFC 827

Query: 122 ---NPTDIISISEGLLVRFRSDDTVVGKGFSASY 152
               P  +++    + +RF SD++V  KGF AS+
Sbjct: 828 GSKKPEPVLATGNRMFLRFYSDNSVQRKGFQASH 861

Cleaves the C-terminal propeptides of procollagen I, II and III. Induces cartilage and bone formation. May participate in dorsoventral patterning during early development by cleaving chordin (CHRD).

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 1

EC: 9

>sp|P13497|BMP1_HUMAN Bone morphogenetic protein 1 OS=Homo sapiens GN=BMP1 PE=1 SV=2

 Score =  123 bits (308), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 83/154 (53%), Gaps = 38/154 (24%)

Query: 37  DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
           DKDEC  +NGGCQ +C NT GSY C C +G+ L +N HDCKE GC +++T+ +G I +PN
Sbjct: 703 DKDECSKDNGGCQQDCVNTFGSYECQCRSGFVLHDNKHDCKEAGCDHKVTSTSGTITSPN 762

Query: 97  HPDYYPSKRECIWHFTTTPGHRIKL----------------------------------- 121
            PD YPSK+EC W  ++TPGHR+KL                                   
Sbjct: 763 WPDKYPSKKECTWAISSTPGHRVKLTFMEMDIESQPECAYDHLEVFDGRDAKAPVLGRFC 822

Query: 122 ---NPTDIISISEGLLVRFRSDDTVVGKGFSASY 152
               P  +++    + +RF SD++V  KGF AS+
Sbjct: 823 GSKKPEPVLATGSRMFLRFYSDNSVQRKGFQASH 856

Cleaves the C-terminal propeptides of procollagen I, II and III. Induces cartilage and bone formation. May participate in dorsoventral patterning during early development by cleaving chordin (CHRD).

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 4

EC: .

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
170053250	1451	ubiquitin-protein ligase [Culex quinquef	0.225	0.028	0.781	1e-38
157135134	1404	bone morphogenetic protein [Aedes aegypt	0.403	0.053	0.591	4e-38
307193271	1238	Tolloid-like protein 2 [Harpegnathos sal	0.494	0.074	0.741	9e-38
332021857	1224	Tolloid-like protein 2 [Acromyrmex echin	0.623	0.094	0.5	3e-37
307169336	1051	Tolloid-like protein 2 [Camponotus flori	0.623	0.110	0.493	5e-37
328787501	1232	PREDICTED: tolkin [Apis mellifera]	0.451	0.068	0.788	9e-37
345495274	1135	PREDICTED: tolloid-like protein 2-like [	0.451	0.074	0.776	1e-36
340722615	1233	PREDICTED: tolloid-like protein 2-like [	0.623	0.094	0.493	2e-36
350424355	1086	PREDICTED: tolloid-like protein 2-like [	0.623	0.106	0.493	3e-36
383851625	1225	PREDICTED: tolloid-like protein 2-like [	0.623	0.094	0.487	4e-36

>gi|170053250|ref|XP_001862587.1| ubiquitin-protein ligase [Culex quinquefasciatus] gi|167873842|gb|EDS37225.1| ubiquitin-protein ligase [Culex quinquefasciatus]

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 68/87 (78%), Positives = 78/87 (89%)

Query: 35   SQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKT 94
            S D DEC  NNGGCQHEC+NT+GSY+CSCHNGYTL +NGHDCKEGGCKYE+T PNG I +
Sbjct: 1095 STDVDECAVNNGGCQHECKNTLGSYVCSCHNGYTLQDNGHDCKEGGCKYEVTTPNGQIFS 1154

Query: 95   PNHPDYYPSKRECIWHFTTTPGHRIKL 121
            PN+PDYYP K++CIWHFTTTPGHRI+L
Sbjct: 1155 PNYPDYYPPKKDCIWHFTTTPGHRIRL 1181

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157135134|ref|XP_001663414.1| bone morphogenetic protein [Aedes aegypti] gi|108870300|gb|EAT34525.1| AAEL013239-PA [Aedes aegypti]

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 87/120 (72%)

Query: 2    NRLDPRIEDKCNNCNESPHDTLTVFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYIC 61
            N++ P I    N          T+      +  S D DEC  NNGGCQHEC+NT+GSY+C
Sbjct: 1022 NKIPPTITSDGNTLRVEFKSDKTIQKSGFAAIYSTDVDECAVNNGGCQHECKNTLGSYVC 1081

Query: 62   SCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKL 121
            SCHNGY L +NGHDCKEGGCKYE+++PNG I +PN+PDYYP K++CIWHFTTTPGHRI+L
Sbjct: 1082 SCHNGYALQDNGHDCKEGGCKYEVSSPNGQIFSPNYPDYYPPKKDCIWHFTTTPGHRIRL 1141

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307193271|gb|EFN76162.1| Tolloid-like protein 2 [Harpegnathos saltator]

 Score =  161 bits (408), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 69/93 (74%), Positives = 79/93 (84%)

Query: 37   DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
            D DEC  NNGGCQHEC+NTIGSY CSCHNG+TL ENGHDCKEGGCKYEITAP G I +PN
Sbjct: 938  DMDECANNNGGCQHECKNTIGSYQCSCHNGFTLHENGHDCKEGGCKYEITAPMGTITSPN 997

Query: 97   HPDYYPSKRECIWHFTTTPGHRIKLNPTDIISI 129
            +PDYYP +++C+WHFTT PGHRIKL    I++I
Sbjct: 998  YPDYYPGRKDCVWHFTTKPGHRIKLVCIAILAI 1030

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021857|gb|EGI62193.1| Tolloid-like protein 2 [Acromyrmex echinatior]

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 77/154 (50%), Positives = 93/154 (60%), Gaps = 38/154 (24%)

Query: 37   DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
            D DEC  NNGGCQHEC+NTIGSY CSCHNG+TL ENGHDCKEGGCKYEIT P G I +PN
Sbjct: 931  DMDECANNNGGCQHECKNTIGSYQCSCHNGFTLHENGHDCKEGGCKYEITTPMGTITSPN 990

Query: 97   HPDYYPSKRECIWHFTTTPGHRIKL----------------------------------- 121
            +PDYYP +++C+WHFTT PGHRIKL                                   
Sbjct: 991  YPDYYPGRKDCVWHFTTKPGHRIKLVFKVFEMEPHQECAYDHIAIYDGDSPDSITLGRFC 1050

Query: 122  ---NPTDIISISEGLLVRFRSDDTVVGKGFSASY 152
                P  I++ S  + + F+SD +V  KGF A++
Sbjct: 1051 GNKEPHPILATSNQMYMVFKSDASVQRKGFLATH 1084

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307169336|gb|EFN62057.1| Tolloid-like protein 2 [Camponotus floridanus]

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 76/154 (49%), Positives = 93/154 (60%), Gaps = 38/154 (24%)

Query: 37  DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
           D DEC +NNGGCQHEC+NTIGSY CSCHNG+TL ENGHDCKEGGCKYEI AP G I +PN
Sbjct: 759 DMDECASNNGGCQHECKNTIGSYQCSCHNGFTLHENGHDCKEGGCKYEIIAPVGTITSPN 818

Query: 97  HPDYYPSKRECIWHFTTTPGHRIKL----------------------------------- 121
           +PDYYP +++C+WHFTT PGHRIKL                                   
Sbjct: 819 YPDYYPGRKDCVWHFTTKPGHRIKLVFKVFEMESHQECAYDHIVIYDGDSPDSLTLGRFC 878

Query: 122 ---NPTDIISISEGLLVRFRSDDTVVGKGFSASY 152
               P  I++    + + F+SD +V  KGF A++
Sbjct: 879 GTKEPHPILATGNQMYMVFKSDASVQRKGFLATH 912

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328787501|ref|XP_393866.3| PREDICTED: tolkin [Apis mellifera]

 Score =  158 bits (400), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 67/85 (78%), Positives = 73/85 (85%)

Query: 37   DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
            D DEC TNNGGCQHECRNTIGSY CSCHNG+TL ENGHDCKEGGCKYEI AP G I +PN
Sbjct: 930  DMDECATNNGGCQHECRNTIGSYQCSCHNGFTLHENGHDCKEGGCKYEIAAPMGTITSPN 989

Query: 97   HPDYYPSKRECIWHFTTTPGHRIKL 121
            +PDYYP  ++C+WHF T PGHRIKL
Sbjct: 990  YPDYYPGLKDCVWHFVTKPGHRIKL 1014

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345495274|ref|XP_003427473.1| PREDICTED: tolloid-like protein 2-like [Nasonia vitripennis]

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 66/85 (77%), Positives = 76/85 (89%)

Query: 37  DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
           D DEC  NNGGCQHEC+NTIGSY CSCHNG+TL +NGHDCKEGGCKYEIT+P+G I +PN
Sbjct: 833 DMDECANNNGGCQHECKNTIGSYHCSCHNGFTLHDNGHDCKEGGCKYEITSPSGTITSPN 892

Query: 97  HPDYYPSKRECIWHFTTTPGHRIKL 121
           +PDYYP K++C+WHF TTPGHRIKL
Sbjct: 893 YPDYYPGKKDCVWHFITTPGHRIKL 917

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340722615|ref|XP_003399699.1| PREDICTED: tolloid-like protein 2-like [Bombus terrestris]

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/154 (49%), Positives = 90/154 (58%), Gaps = 38/154 (24%)

Query: 37   DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
            D DEC  NNGGCQHECRNTIGSY CSCHNG+TL ENGHDCKEGGCKYEI AP G I +PN
Sbjct: 938  DMDECANNNGGCQHECRNTIGSYQCSCHNGFTLHENGHDCKEGGCKYEIVAPMGTITSPN 997

Query: 97   HPDYYPSKRECIWHFTTTPGHRIKL----------------------------------- 121
            +PDYYP  ++C+WHF T PGHRIKL                                   
Sbjct: 998  YPDYYPGLKDCVWHFVTKPGHRIKLVFKVFEMESHQECNYDHIAIYDGDSPDSHVLGKFC 1057

Query: 122  ---NPTDIISISEGLLVRFRSDDTVVGKGFSASY 152
                P  I++    + + F+SD +V  KGF A++
Sbjct: 1058 GTKEPHPILATGNQMYMVFKSDASVQRKGFLATH 1091

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350424355|ref|XP_003493768.1| PREDICTED: tolloid-like protein 2-like [Bombus impatiens]

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/154 (49%), Positives = 90/154 (58%), Gaps = 38/154 (24%)

Query: 37  DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
           D DEC  NNGGCQHECRNTIGSY CSCHNG+TL ENGHDCKEGGCKYEI AP G I +PN
Sbjct: 791 DMDECANNNGGCQHECRNTIGSYQCSCHNGFTLHENGHDCKEGGCKYEIVAPMGTITSPN 850

Query: 97  HPDYYPSKRECIWHFTTTPGHRIKL----------------------------------- 121
           +PDYYP  ++C+WHF T PGHRIKL                                   
Sbjct: 851 YPDYYPGLKDCVWHFVTKPGHRIKLVFKVFEMESHQECNYDHIAIYDGDSPDSHVLGKFC 910

Query: 122 ---NPTDIISISEGLLVRFRSDDTVVGKGFSASY 152
               P  I++    + + F+SD +V  KGF A++
Sbjct: 911 GTKEPHPILATGNQMYMVFKSDASVQRKGFLATH 944

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383851625|ref|XP_003701332.1| PREDICTED: tolloid-like protein 2-like [Megachile rotundata]

 Score =  156 bits (394), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 75/154 (48%), Positives = 90/154 (58%), Gaps = 38/154 (24%)

Query: 37   DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
            D DEC  NNGGCQHECRNTIGSY CSCHNG+TL ENGHDCKEGGCKYEI AP G I +PN
Sbjct: 930  DMDECANNNGGCQHECRNTIGSYQCSCHNGFTLHENGHDCKEGGCKYEIVAPVGTITSPN 989

Query: 97   HPDYYPSKRECIWHFTTTPGHRIKL----------------------------------- 121
            +PDYYP  ++C+WHF T PGHRIKL                                   
Sbjct: 990  YPDYYPGLKDCVWHFVTKPGHRIKLIFKVFEMESHQECNYDHIAIYDGDSPDSHVLGKFC 1049

Query: 122  ---NPTDIISISEGLLVRFRSDDTVVGKGFSASY 152
                P  I++    + + F+SD ++  KGF A++
Sbjct: 1050 GTKEPHPILATGNQMYMVFKSDASIQRKGFLATH 1083

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
FB|FBgn0004885	1464	tok "tolkin" [Drosophila melan	0.510	0.064	0.701	1.2e-45
UNIPROTKB|Q9Y6L7	1015	TLL2 "Tolloid-like protein 2"	0.456	0.083	0.623	3.4e-36
UNIPROTKB|F1NRI8	960	TLL2 "Uncharacterized protein"	0.456	0.088	0.576	2.2e-35
MGI|MGI:1346044	1012	Tll2 "tolloid-like 2" [Mus mus	0.456	0.083	0.6	4.8e-35
UNIPROTKB|F1MF35	893	TLL2 "Uncharacterized protein"	0.456	0.095	0.611	6.7e-35
UNIPROTKB|F1SBG0	894	TLL2 "Uncharacterized protein"	0.456	0.095	0.6	1.1e-34
UNIPROTKB|Q8JI28	1007	tll1 "Tolloid-like protein 1"	0.462	0.085	0.616	4.4e-34
UNIPROTKB|F1Q3H3	969	TLL1 "Uncharacterized protein"	0.596	0.114	0.538	6.3e-34
UNIPROTKB|Q9DER7	1008	TLL1 "Tolloid-like protein 1"	0.596	0.110	0.529	1.2e-33
UNIPROTKB|F1P398	1009	TLL1 "Tolloid-like protein 1"	0.596	0.110	0.529	1.2e-33

FB|FBgn0004885 tok "tolkin" [Drosophila melanogaster (taxid:7227)]

 Score = 397 (144.8 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
 Identities = 68/97 (70%), Positives = 76/97 (78%)

Query:    37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
             D DEC  NNGGCQHECRNTIGSYIC CHNGY++ ENGHDCKEG CKYEI+AP G I +PN
Sbjct:  1114 DIDECAVNNGGCQHECRNTIGSYICMCHNGYSMHENGHDCKEGECKYEISAPFGTIFSPN 1173

Query:    97 HPDYYPSKRECIWHFTTTPGHRIKL--NPTDIISISE 131
             +PD YP   +C+WHF TTPGHRIKL  N  D+ S  E
Sbjct:  1174 YPDSYPPNADCVWHFITTPGHRIKLIFNEFDVESHQE 1210

GO:0004222 "metalloendopeptidase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=IMP

GO:0008045 "motor neuron axon guidance" evidence=IMP

GO:0007415 "defasciculation of motor neuron axon" evidence=IMP

GO:0010629 "negative regulation of gene expression" evidence=IDA

GO:0016485 "protein processing" evidence=IDA

GO:0007411 "axon guidance" evidence=IMP

UNIPROTKB|Q9Y6L7 TLL2 "Tolloid-like protein 2" [Homo sapiens (taxid:9606)]

 Score = 334 (122.6 bits), Expect = 3.4e-36, Sum P(3) = 3.4e-36
 Identities = 53/85 (62%), Positives = 66/85 (77%)

Query:    37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
             DKDEC  +NGGCQHEC NT GSY+C C NGY L ENGHDCKE GC ++I++  G + +PN
Sbjct:   732 DKDECAKDNGGCQHECVNTFGSYLCRCRNGYWLHENGHDCKEAGCAHKISSVEGTLASPN 791

Query:    97 HPDYYPSKRECIWHFTTTPGHRIKL 121
              PD YPS+REC W+ ++T GHR+KL
Sbjct:   792 WPDKYPSRRECTWNISSTAGHRVKL 816

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

UNIPROTKB|F1NRI8 TLL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 330 (121.2 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
 Identities = 49/85 (57%), Positives = 67/85 (78%)

Query:    37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
             DKDEC  +NGGCQHEC NT GSY+C C NG+ L EN HDCKE GC++++++  G++ +PN
Sbjct:   677 DKDECSKDNGGCQHECINTFGSYVCQCRNGFKLHENNHDCKEAGCEHKLSSAEGMMSSPN 736

Query:    97 HPDYYPSKRECIWHFTTTPGHRIKL 121
              PD YPS++EC W+ + TPGHR+K+
Sbjct:   737 WPDKYPSRKECTWNISATPGHRVKV 761

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

MGI|MGI:1346044 Tll2 "tolloid-like 2" [Mus musculus (taxid:10090)]

 Score = 328 (120.5 bits), Expect = 4.8e-35, Sum P(3) = 4.8e-35
 Identities = 51/85 (60%), Positives = 65/85 (76%)

Query:    37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
             DKDEC  +NGGCQ EC NT GSY+C C NGY L ENGHDCKE GC Y+I++  G + +PN
Sbjct:   729 DKDECAKDNGGCQQECVNTFGSYLCRCRNGYRLHENGHDCKEAGCAYKISSAEGTLMSPN 788

Query:    97 HPDYYPSKRECIWHFTTTPGHRIKL 121
              PD YPS++EC W+ ++T GHR+K+
Sbjct:   789 WPDKYPSRKECTWNISSTAGHRVKI 813

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1MF35 TLL2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 321 (118.1 bits), Expect = 6.7e-35, Sum P(3) = 6.7e-35
 Identities = 52/85 (61%), Positives = 64/85 (75%)

Query:    37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
             DKDEC  +NGGCQHEC NT GSY+C C NGY L ENG DCKE GC ++I++  G + +PN
Sbjct:   610 DKDECAKDNGGCQHECVNTFGSYLCRCRNGYRLHENGQDCKEAGCVHKISSTEGSLVSPN 669

Query:    97 HPDYYPSKRECIWHFTTTPGHRIKL 121
              PD YPS+REC W  ++T GHR+KL
Sbjct:   670 WPDKYPSRRECTWTISSTAGHRVKL 694

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

UNIPROTKB|F1SBG0 TLL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 322 (118.4 bits), Expect = 1.1e-34, Sum P(3) = 1.1e-34
 Identities = 51/85 (60%), Positives = 65/85 (76%)

Query:    37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
             DKDEC  +NGGCQHEC NT+GSY+C C NGY L EN  DCKE GC ++I++  G + +PN
Sbjct:   611 DKDECAKDNGGCQHECVNTVGSYLCRCRNGYRLHENQQDCKEAGCAHKISSAEGTLVSPN 670

Query:    97 HPDYYPSKRECIWHFTTTPGHRIKL 121
              PD YPS+REC W+ ++T GHR+KL
Sbjct:   671 WPDKYPSRRECTWNISSTAGHRVKL 695

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

UNIPROTKB|Q8JI28 tll1 "Tolloid-like protein 1" [Xenopus laevis (taxid:8355)]

 Score = 334 (122.6 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
 Identities = 53/86 (61%), Positives = 66/86 (76%)

Query:    37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPN 96
             DKDEC  +NGGCQHEC NTIGSY+C C NG+ L +N HDCKE  C++ I + NGVI +PN
Sbjct:   725 DKDECSKDNGGCQHECINTIGSYVCQCRNGFVLHDNKHDCKEAECEHRIHSSNGVITSPN 784

Query:    97 HPDYYPSKRECIWHFTTTPGHRIKLN 122
              PD YPS++EC W  + TPGHR+KL+
Sbjct:   785 WPDKYPSRKECTWEISATPGHRVKLS 810

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1Q3H3 TLL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 330 (121.2 bits), Expect = 6.3e-34, Sum P(2) = 6.3e-34
 Identities = 63/117 (53%), Positives = 77/117 (65%)

Query:     8 IEDKCNNCNESPHDTLTVFSKIGDSFKSQ---DKDECMTNNGGCQHECRNTIGSYICSCH 64
             I  + NN         TV SK G  FK+    DKDEC  +NGGCQHEC NT+GSY+C C 
Sbjct:   657 ITSQFNNMRIEFRSDNTV-SKKG--FKAHFFSDKDECSKDNGGCQHECVNTMGSYMCQCR 713

Query:    65 NGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKL 121
             NG+ L EN HDCKE  C+ +I +P+G I +PN PD YPS++EC W  + TPGHRIKL
Sbjct:   714 NGFVLHENKHDCKEAECEQKIHSPSGFITSPNWPDKYPSRKECTWEISATPGHRIKL 770

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0004222 "metalloendopeptidase activity" evidence=IEA

UNIPROTKB|Q9DER7 TLL1 "Tolloid-like protein 1" [Gallus gallus (taxid:9031)]

 Score = 334 (122.6 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
 Identities = 62/117 (52%), Positives = 77/117 (65%)

Query:     8 IEDKCNNCNESPHDTLTVFSKIGDSFKSQ---DKDECMTNNGGCQHECRNTIGSYICSCH 64
             I  + NN         TV SK G  FK+    DKDEC  +NGGCQHEC NT+GSY+C C 
Sbjct:   696 ITSQYNNMRIEFRSDNTV-SKKG--FKAHFFSDKDECSKDNGGCQHECINTVGSYVCQCR 752

Query:    65 NGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKL 121
             NG+ L EN HDCKE  C+ +I +PNG+I +PN PD YPS++EC W  + TPG R+KL
Sbjct:   753 NGFVLHENKHDCKEAECEQKIHSPNGIIMSPNWPDKYPSRKECTWEISATPGQRVKL 809

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

UNIPROTKB|F1P398 TLL1 "Tolloid-like protein 1" [Gallus gallus (taxid:9031)]

 Score = 334 (122.6 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
 Identities = 62/117 (52%), Positives = 77/117 (65%)

Query:     8 IEDKCNNCNESPHDTLTVFSKIGDSFKSQ---DKDECMTNNGGCQHECRNTIGSYICSCH 64
             I  + NN         TV SK G  FK+    DKDEC  +NGGCQHEC NT+GSY+C C 
Sbjct:   697 ITSQYNNMRIEFRSDNTV-SKKG--FKAHFFSDKDECSKDNGGCQHECINTVGSYVCQCR 753

Query:    65 NGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKL 121
             NG+ L EN HDCKE  C+ +I +PNG+I +PN PD YPS++EC W  + TPG R+KL
Sbjct:   754 NGFVLHENKHDCKEAECEQKIHSPNGIIMSPNWPDKYPSRKECTWEISATPGQRVKL 810

GO:0004222 "metalloendopeptidase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	186
pfam00431	110	pfam00431, CUB, CUB domain	3e-16
cd00041	113	cd00041, CUB, CUB domain; extracellular domain; pr	2e-14
smart00042	102	smart00042, CUB, Domain first found in C1r, C1s, u	1e-11
cd01475	224	cd01475, vWA_Matrilin, VWA_Matrilin: In cartilagin	4e-07
pfam12947	36	pfam12947, EGF_3, EGF domain	4e-06
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	5e-06
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	2e-05
smart00181	35	smart00181, EGF, Epidermal growth factor-like doma	3e-04
cd00053	36	cd00053, EGF, Epidermal growth factor domain, foun	0.001

>gnl|CDD|215916 pfam00431, CUB, CUB domain

 Score = 70.4 bits (173), Expect = 3e-16
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 38/110 (34%)

Query: 81  CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN------------------ 122
           C   +T  +G I +PN+P+ YP  ++C+W     PG+RI L                   
Sbjct: 1   CGGVLTESSGSITSPNYPNSYPPNKDCVWTIRAPPGYRISLTFQDFDLEDHDECGYDYVE 60

Query: 123 --------------------PTDIISISEGLLVRFRSDDTVVGKGFSASY 152
                               P DI S S  + ++F SD ++  +GF A+Y
Sbjct: 61  IRDGLPSSSPLLGRFCGSGPPEDIRSTSNQMTIKFVSDSSISKRGFKATY 110

Length = 110

>gnl|CDD|238001 cd00041, CUB, CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast

 Score = 65.9 bits (161), Expect = 2e-14
 Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 39/113 (34%)

Query: 81  CKYEITAP-NGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN----------------- 122
           C   +TA  +G I +PN+P+ YP+   C+W     PG+RI+L                  
Sbjct: 1   CGGTLTASTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSPNCSYDYL 60

Query: 123 ---------------------PTDIISISEGLLVRFRSDDTVVGKGFSASYIA 154
                                P  IIS    L VRFRSD +V G+GF A+Y A
Sbjct: 61  EIYDGPSTSSPLLGRFCGSTLPPPIISSGNSLTVRFRSDSSVTGRGFKATYSA 113

Length = 113

>gnl|CDD|214483 smart00042, CUB, Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein

 Score = 58.2 bits (141), Expect = 1e-11
 Identities = 28/102 (27%), Positives = 38/102 (37%), Gaps = 39/102 (38%)

Query: 90  GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKL---------------------------- 121
           G I +PN+P  YP+  +C+W     PG+RI+L                            
Sbjct: 1   GTITSPNYPQSYPNNLDCVWTIRAPPGYRIELQFTDFDLESSDNCEYDYVEIYDGPSASS 60

Query: 122 -----------NPTDIISISEGLLVRFRSDDTVVGKGFSASY 152
                       P  I S S  L + F SD +V  +GFSA Y
Sbjct: 61  PLLGRFCGSEAPPPVISSSSNSLTLTFVSDSSVQKRGFSARY 102

This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain. Length = 102

>gnl|CDD|238752 cd01475, vWA_Matrilin, VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

 Score = 48.1 bits (115), Expect = 4e-07
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)

Query: 28  KIGDSFKS---QDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENG 73
           ++   F+       D C T +  CQ  C +T GSY+C+C  GY LLE+ 
Sbjct: 174 ELTKKFQGKICVVPDLCATLSHVCQQVCISTPGSYLCACTEGYALLEDN 222

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands. Length = 224

>gnl|CDD|205157 pfam12947, EGF_3, EGF domain

 Score = 41.8 bits (99), Expect = 4e-06
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 4/38 (10%)

Query: 41 CMTNNGGC-QH-ECRNTIGSYICSCHNGYTLLENGHDC 76
          C  NNGGC  +  C NT GS+ C+C +GYT   +G  C
Sbjct: 1  CAENNGGCHPNATCTNTGGSFTCTCKSGYTG--DGVTC 36

This family includes a variety of EGF-like domain homologues. This family includes the C-terminal domain of the malaria parasite MSP1 protein. Length = 36

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 41.5 bits (98), Expect = 5e-06
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 6/43 (13%)

Query: 37 DKDECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDCK 77
          D DEC + N  CQ+   C NT+GSY C C  GYT   +G +C+
Sbjct: 1  DIDECASGNP-CQNGGTCVNTVGSYRCECPPGYT---DGRNCE 39

Length = 39

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 37 DKDECMTNNG-GCQHECRNTIGSYICSCHNGYTL 69
          D DEC + N       C NT+GSY CSC  GYT 
Sbjct: 1  DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYTG 34

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|214544 smart00181, EGF, Epidermal growth factor-like domain

 Score = 36.3 bits (84), Expect = 3e-04
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 40 ECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLEN 72
          EC  + G C +  C NT GSY CSC  GYT  + 
Sbjct: 1  EC-ASGGPCSNGTCINTPGSYTCSCPPGYTGDKR 33

Length = 35

>gnl|CDD|238010 cd00053, EGF, Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

 Score = 34.8 bits (80), Expect = 0.001
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 3/35 (8%)

Query: 40 ECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLEN 72
          EC   +  C +   C NT GSY C C  GYT   +
Sbjct: 1  EC-AASNPCSNGGTCVNTPGSYRCVCPPGYTGDRS 34

Length = 36

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	186
PF00431	110	CUB: CUB domain CUB domain entry Spermadhesins fam	99.43
cd00041	113	CUB CUB domain; extracellular domain; present in p	99.41
smart00042	102	CUB Domain first found in C1r, C1s, uEGF, and bone	99.25
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	98.91
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.81
KOG4586|consensus	156		98.76
KOG4260|consensus	350		98.22
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	97.97
PF12662	24	cEGF: Complement Clr-like EGF-like	97.7
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.47
KOG1214|consensus	1289		97.46
PF12662	24	cEGF: Complement Clr-like EGF-like	97.3
KOG4289|consensus	2531		97.06
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.02
KOG1214|consensus	1289		96.79
KOG1219|consensus	4289		96.65
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	96.54
KOG4292|consensus	454		96.37
smart00181	35	EGF Epidermal growth factor-like domain.	96.29
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	95.66
cd00053	36	EGF Epidermal growth factor domain, found in epide	95.27
KOG1219|consensus	4289		94.86
PF02408	120	CUB_2: CUB-like domain; InterPro: IPR003366 This d	93.29
KOG4292|consensus	454		92.63
PF09064	34	Tme5_EGF_like: Thrombomodulin like fifth domain, E	91.92
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	91.15

>PF00431 CUB: CUB domain CUB domain entry Spermadhesins family entry Link to schematic domain picture by Peer Bork

Probab=99.43  E-value=4.6e-13  Score=90.60  Aligned_cols=72  Identities=44%  Similarity=0.888  Sum_probs=64.7

Q ss_pred             cceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC------------------------------------
Q psy2974          81 CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT------------------------------------  124 (186)
Q Consensus        81 C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~------------------------------------  124 (186)
                      |++.+....|.|.||+||..|+.+..|.|.|.+++++.|.|.|.                                    
T Consensus         1 Cg~~~~~~~g~i~Sp~yp~~y~~~~~C~w~i~~~~~~~I~l~f~~~~~~~~~~c~~d~l~v~~g~~~~~~~~~~~cg~~~   80 (110)
T PF00431_consen    1 CGGRLTNNSGIISSPNYPSNYPSNSDCTWTITAPPGHRIRLTFLSFDLESSDSCCQDYLEVYDGNDESSPLLGRFCGSSP   80 (110)
T ss_dssp             SEEEECSSEEEEESTTTTS-SSSSEEEEEEEE-STTEEEEEEEEEEEB--TTTSTSSEEEEESSSSTTSEEEEEESSSSC
T ss_pred             CcCEEECCeEEEECCCCCCCCCCCCcEeEEEEecccceeeeccccccceeeeeecccceeEEeeccccceeeeeccCCcC
Confidence            77888889999999999999999999999999999999999853                                    


Q ss_pred             --ceeeeCCeEEEEEEeCCCCCCCCcEEEE
Q psy2974         125 --DIISISEGLLVRFRSDDTVVGKGFSASY  152 (186)
Q Consensus       125 --~~~s~~~~l~i~f~sd~~~~~~GF~~~y  152 (186)
                        .+++.++.|+|.|+++......||+|+|
T Consensus        81 ~~~i~s~~~~l~i~f~s~~~~~~~gF~~~y  110 (110)
T PF00431_consen   81 PPSIISSSNSLFIRFHSDSSNSSRGFKATY  110 (110)
T ss_dssp             CEEEEESSSEEEEEEEESSSSTTSEEEEEE
T ss_pred             CccEEECCCEEEEEEEECCCCCCccEEEEC
Confidence              3688899999999999999999999987

; InterPro: IPR000859 The CUB domain (for complement C1r/C1s, Uegf, Bmp1) is a structural motif of approximately 110 residues found almost exclusively in extracellular and plasma membrane-associated proteins, many of which are developmentally regulated [, ]. These proteins are involved in a diverse range of functions, including complement activation, developmental patterning, tissue repair, axon guidance and angiogenesis, cell signalling, fertilisation, haemostasis, inflammation, neurotransmission, receptor-mediated endocytosis, and tumour suppression [, ]. Many CUB-containing proteins are peptidases belonging to MEROPS peptidase families M12A (astacin) and S1A (chymotrypsin). Proteins containing a CUB domain include: Mammalian complement subcomponents C1s/C1r, which form the calcium-dependent complex C1, the first component of the classical pathway of the complement system. Cricetidae sp. (Hamster) serine protease Casp, which degrades type I and IV collagen and fibronectin in the presence of calcium. Mammalian complement-activating component of Ra-reactive factor (RARF), a protease that cleaves the C4 component of complement. Vertebrate enteropeptidase (3.4.21.9 from EC), a type II membrane protein of the intestinal brush border, which activates trypsinogen. Vertebrate bone morphogenic protein 1 (BMP-1), a protein which induces cartilage and bone formation and expresses metalloendopeptidase activity. Sea urchin blastula proteins BP10 and SpAN. Caenorhabditis elegans hypothetical proteins F42A10.8 and R151.5. Neuropilin (A5 antigen), a calcium-independent cell adhesion molecule that functions during the formation of certain neuronal circuits. Fibropellins I and III from Strongylocentrotus purpuratus (Purple sea urchin). Mammalian hyaluronate-binding protein TSG-6 (or PS4), a serum and growth factor induced protein. Mammalian spermadhesins. Xenopus laevis embryonic protein UVS.2, which is expressed during dorsoanterior development. Several of the above proteins consist of a catalytic domain together with several CUB domains interspersed by calcium-binding EGF domains. Some CUB domains appear to be involved in oligomerisation and/or recognition of substrates and binding partners. For example, in the complement proteases, the CUB domains mediate dimerisation and binding to collagen-like regions of target proteins (e.g. C1q for C1r/C1s). The structure of CUB domains consists of a beta-sandwich with a jelly-roll fold. Almost all CUB domains contain four conserved cysteines that probably form two disulphide bridges (C1-C2, C3-C4). The CUB1 domains of C1s and Map19 have calcium-binding sites [].; PDB: 1SFP_A 3KQ4_B 2WNO_A 2QQK_A 2QQL_A 2QQO_B 2QQM_A 3POJ_A 3POB_A 3POG_B ....

>cd00041 CUB CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast

Probab=99.41  E-value=2.3e-12  Score=87.48  Aligned_cols=74  Identities=46%  Similarity=0.876  Sum_probs=65.7

Q ss_pred             cceeecCC-CCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC-----------------------------------
Q psy2974          81 CKYEITAP-NGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT-----------------------------------  124 (186)
Q Consensus        81 C~~~~~~~-~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~-----------------------------------  124 (186)
                      |+..+... .|.|.||+||..|+++..|.|.|.++++.+|.|.|.                                   
T Consensus         1 C~~~~~~~~~g~i~Sp~~p~~~~~~~~C~w~i~~~~g~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~Cg~~   80 (113)
T cd00041           1 CGGTLTASTSGTISSPNYPNNYPNNLNCVWTIEAPPGYRIRLTFEDFDLESSPNCSYDYLEIYDGPSTSSPLLGRFCGST   80 (113)
T ss_pred             CCCEEccCCCeEEECCCCCCCCCCCCcEEEEEEcCCCCEEEEEEeCcccccCCCCCCcEEEEEcCCCCccccceeeECCC
Confidence            66677776 899999999999999999999999999999988853                                   


Q ss_pred             ---ceeeeCCeEEEEEEeCCCCCCCCcEEEEEE
Q psy2974         125 ---DIISISEGLLVRFRSDDTVVGKGFSASYIA  154 (186)
Q Consensus       125 ---~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~  154 (186)
                         .++|.++.|.|.|++|......||+++|++
T Consensus        81 ~~~~~~s~~~~~~i~f~s~~~~~~~GF~~~y~~  113 (113)
T cd00041          81 LPPPIISSGNSLTVRFRSDSSVTGRGFKATYSA  113 (113)
T ss_pred             CCCCEEecCCEEEEEEEeCCCCCCCCEEEEEEC
Confidence               267888999999999999999999999973

>smart00042 CUB Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein

Probab=99.25  E-value=2.8e-11  Score=80.93  Aligned_cols=63  Identities=48%  Similarity=0.850  Sum_probs=54.5

Q ss_pred             CcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccCc---------------------------------------eeeeC
Q psy2974          90 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTD---------------------------------------IISIS  130 (186)
Q Consensus        90 G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~~---------------------------------------~~s~~  130 (186)
                      |.|.||+||..|+.+..|.|.|.+++++.|.|.|..                                       +.|.+
T Consensus         1 G~i~Sp~yP~~y~~~~~C~w~i~~~~g~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~Cg~~~~~~~~~s~~   80 (102)
T smart00042        1 GTITSPNYPQSYPNNLDCVWTIRAPPGYRIELQFTDFDLESSDNCEYDYVEIYDGPSASSPLLGRFCGSELPPPVISSSS   80 (102)
T ss_pred             CEEeCCCCCcCCCCCCcEEEEEECCCCeEEEEEEEEEeccCCCCeeEeEEEEEeCCCCCCceeEEEecCcCCCCeEEcCC
Confidence            678999999999999999999999999999887531                                       34558


Q ss_pred             CeEEEEEEeCCCCCCCCcEEEE
Q psy2974         131 EGLLVRFRSDDTVVGKGFSASY  152 (186)
Q Consensus       131 ~~l~i~f~sd~~~~~~GF~~~y  152 (186)
                      +.|+|.|+++......||+++|
T Consensus        81 n~~~i~f~s~~~~~~~GF~~~y  102 (102)
T smart00042       81 NSLTVTFVSDSSVQKRGFSARY  102 (102)
T ss_pred             CEEEEEEEeCCCCCCCCeEEEC
Confidence            8999999999988889999876

This domain is found mostly among developmentally-regulated proteins. Spermadhesins contain only this domain.

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=98.91  E-value=9.5e-10  Score=59.17  Aligned_cols=36  Identities=61%  Similarity=1.279  Sum_probs=30.6

Q ss_pred             ccccccCcccccccCCCceEEEecCCeeeecccccc
Q psy2974          41 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC   76 (186)
Q Consensus        41 C~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C   76 (186)
                      |..+++.|+|.|++.+++|+|.|++||.|..|+++|
T Consensus         1 C~~~NGgC~h~C~~~~g~~~C~C~~Gy~L~~D~~tC   36 (36)
T PF14670_consen    1 CSVNNGGCSHICVNTPGSYRCSCPPGYKLAEDGRTC   36 (36)
T ss_dssp             CTTGGGGSSSEEEEETTSEEEE-STTEEE-TTSSSE
T ss_pred             CCCCCCCcCCCCccCCCceEeECCCCCEECcCCCCC
Confidence            455678999999999999999999999999999876

...

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.81  E-value=4.5e-09  Score=58.94  Aligned_cols=40  Identities=48%  Similarity=0.991  Sum_probs=34.0

Q ss_pred             ccccccccccCcc--cccccCCCceEEEecCCeeeecccccc
Q psy2974          37 DKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDC   76 (186)
Q Consensus        37 d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C   76 (186)
                      ||+||......|.  +.|+|+.|+|.|.|++||.....+..|
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~~~~~~C   42 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYELNDDGTTC   42 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEECTTSSEE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEECCCCCcC
Confidence            7899999877886  799999999999999999966555544

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG4586|consensus

Probab=98.76  E-value=2.4e-08  Score=68.06  Aligned_cols=70  Identities=30%  Similarity=0.618  Sum_probs=61.1

Q ss_pred             CCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC---------------------------------------cee
Q psy2974          87 APNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT---------------------------------------DII  127 (186)
Q Consensus        87 ~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~---------------------------------------~~~  127 (186)
                      ...+.+++|++|..|+++.+|...|.+.+-+.|++.|.                                       .+.
T Consensus        47 ~n~~Iftspn~ps~ypp~r~cv~vi~~~p~~~ve~~Fde~y~IEps~EC~fD~iEvrDGpfGFSPlI~rfCG~~nPp~Ir  126 (156)
T KOG4586|consen   47 QNFNIFTSPNFPSRYPPNRDCVRVIHSRPQHDVEVKFDEVYHIEPSYECPFDFIEVRDGPFGFSPLIARFCGDRNPPEIR  126 (156)
T ss_pred             cccceEecCCccccCCCCcceEEeEecccccceEEeeeeeEEecccccCCCCcccccCCCcCccHHHHHHhccCCChhhe
Confidence            44567899999999999999999999998888877643                                       368


Q ss_pred             eeCCeEEEEEEeCCCCCCCCcEEEEEEEe
Q psy2974         128 SISEGLLVRFRSDDTVVGKGFSASYIAID  156 (186)
Q Consensus       128 s~~~~l~i~f~sd~~~~~~GF~~~y~~~~  156 (186)
                      |.+..|||+|.||......||.|.|..++
T Consensus       127 s~grFlWIkF~sD~ele~~gfsa~y~~~p  155 (156)
T KOG4586|consen  127 SVGRFLWIKFRSDSELEYQGFSAEYAIVP  155 (156)
T ss_pred             ecCcEEEEEEcccchhhhcccceeeeccC
Confidence            99999999999999999999999997654

>KOG4260|consensus

Probab=98.22  E-value=5.4e-07  Score=69.09  Aligned_cols=99  Identities=20%  Similarity=0.380  Sum_probs=66.3

Q ss_pred             ccCcCCCCCCCCCCCCCC------------cEEEcCCCCCccccccccccccCcc--cccccCCCceEEEecCCeeeecc
Q psy2974           7 RIEDKCNNCNESPHDTLT------------VFSKIGDSFKSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLEN   72 (186)
Q Consensus         7 ~~~~~C~~c~~~~~~~~~------------Gy~~~~d~~~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~   72 (186)
                      ...-+|..|+.+|.+.+.            ||.+.  -..|.|||||...+..|.  +.|+|+.|+|.|.+.+||...  
T Consensus       195 e~~lvCt~Ch~~C~~~Csg~~~k~C~kCkkGW~ld--e~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~g--  270 (350)
T KOG4260|consen  195 EQHLVCTACHEGCLGVCSGESSKGCSKCKKGWKLD--EEGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKKG--  270 (350)
T ss_pred             cccchhhhhhhhhhcccCCCCCCChhhhcccceec--ccccccHHHHhcCCCCCChhheeecCCCceEecccccccCC--
Confidence            456688889998885433            89887  345999999998877774  699999999999999999853  


Q ss_pred             cccccc--CCcc---eeecCCCCcccCCCCCCCCCCCCceEE
Q psy2974          73 GHDCKE--GGCK---YEITAPNGVIKTPNHPDYYPSKRECIW  109 (186)
Q Consensus        73 ~~~C~~--~~C~---~~~~~~~G~i~sp~~p~~y~~~~~C~w  109 (186)
                      ...|.-  ..|.   ..+.+..|.+.+-++.+..-....|+|
T Consensus       271 ~d~C~~~~d~~~~kn~~c~ni~~~~r~v~f~~~~~~~g~cV~  312 (350)
T KOG4260|consen  271 VDECQFCADVCASKNRPCMNIDGQYRCVCFSGLIIIEGFCVW  312 (350)
T ss_pred             hHHhhhhhhhcccCCCCcccCCccEEEEecccceeeeeeeec
Confidence            334431  2221   224455555555444443333445555

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=97.97  E-value=4.9e-06  Score=63.59  Aligned_cols=44  Identities=39%  Similarity=0.733  Sum_probs=39.4

Q ss_pred             CCCCccccccccccccCcccccccCCCceEEEecCCeeeecccc
Q psy2974          31 DSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGH   74 (186)
Q Consensus        31 d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~   74 (186)
                      ++..|.++++|...++.|.+.|.+..|+|.|.|++||.+..+++
T Consensus       180 ~~~~C~~~~~C~~~~~~c~~~C~~~~g~~~c~c~~g~~~~~~~~  223 (224)
T cd01475         180 QGKICVVPDLCATLSHVCQQVCISTPGSYLCACTEGYALLEDNK  223 (224)
T ss_pred             ccccCcCchhhcCCCCCccceEEcCCCCEEeECCCCccCCCCCC
Confidence            56789999999988788999999999999999999999877654

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=97.70  E-value=2.2e-05  Score=38.06  Aligned_cols=21  Identities=48%  Similarity=1.168  Sum_probs=19.1

Q ss_pred             ceEEEecCCeeeecccccccc
Q psy2974          58 SYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        58 ~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      ||.|.|++||.+..++++|.+
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~D   21 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCED   21 (24)
T ss_pred             CEEeeCCCCCcCCCCCCcccc
Confidence            689999999999999999974

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.47  E-value=0.00013  Score=39.57  Aligned_cols=31  Identities=55%  Similarity=1.170  Sum_probs=24.8

Q ss_pred             ccccccccccCccc--ccccCCCceEEEecCCee
Q psy2974          37 DKDECMTNNGGCQH--ECRNTIGSYICSCHNGYT   68 (186)
Q Consensus        37 d~~eC~~~~~~C~~--~C~n~~g~~~C~C~~G~~   68 (186)
                      ++++|... ..|.+  .|++..++|.|.|++||.
T Consensus         1 d~~~C~~~-~~C~~~~~C~~~~g~~~C~C~~g~~   33 (39)
T smart00179        1 DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYT   33 (39)
T ss_pred             CcccCcCC-CCcCCCCEeECCCCCeEeECCCCCc
Confidence            46778763 35654  899999999999999996

>KOG1214|consensus

Probab=97.46  E-value=0.00015  Score=63.66  Aligned_cols=48  Identities=38%  Similarity=0.824  Sum_probs=40.7

Q ss_pred             cCCCCCccccccccccccCcc--cccccCCCceEEEecCCeeeecccccc
Q psy2974          29 IGDSFKSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDC   76 (186)
Q Consensus        29 ~~d~~~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C   76 (186)
                      .+|++.|.|.+||...+..|.  ..|.|.+++|.|.|..||....++.+|
T Consensus       725 ~gdgr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tC  774 (1289)
T KOG1214|consen  725 QGDGRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTC  774 (1289)
T ss_pred             CCCCCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcce
Confidence            368899999999998777885  589999999999999999877766555

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=97.30  E-value=7.7e-05  Score=36.16  Aligned_cols=16  Identities=25%  Similarity=0.235  Sum_probs=15.4

Q ss_pred             cEEEcCCCCCcccccc
Q psy2974          25 VFSKIGDSFKSQDKDE   40 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~e   40 (186)
                      ||++.+|++.|.||||
T Consensus         9 Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    9 GYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CCcCCCCCCccccCCC
Confidence            9999999999999997

>KOG4289|consensus

Probab=97.06  E-value=0.0028  Score=58.96  Aligned_cols=86  Identities=21%  Similarity=0.367  Sum_probs=57.3

Q ss_pred             CCcEEEcCCCCCcc-ccccccccccCcccccccCCCceEEEecCCeeeec-----cccccccCCc--ceeecC-CCCccc
Q psy2974          23 LTVFSKIGDSFKSQ-DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLE-----NGHDCKEGGC--KYEITA-PNGVIK   93 (186)
Q Consensus        23 ~~Gy~~~~d~~~C~-d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~-----~~~~C~~~~C--~~~~~~-~~G~i~   93 (186)
                      ++||.    +.+|+ ++++|-..+....+.|+...|+|.|.|.+||....     ....|.++.|  ++.+.+ ..|.+.
T Consensus      1227 PpGFT----gd~CeTeiDlCYs~pC~nng~C~srEggYtCeCrpg~tGehCEvs~~agrCvpGvC~nggtC~~~~nggf~ 1302 (2531)
T KOG4289|consen 1227 PPGFT----GDYCETEIDLCYSGPCGNNGRCRSREGGYTCECRPGFTGEHCEVSARAGRCVPGVCKNGGTCVNLLNGGFC 1302 (2531)
T ss_pred             CCCCC----cccccchhHhhhcCCCCCCCceEEecCceeEEecCCccccceeeecccCccccceecCCCEEeecCCCcee
Confidence            34887    56884 78999886544468999999999999999997211     1123445555  345543 447788


Q ss_pred             CCCCCCCCCCCCceEEEEEc
Q psy2974          94 TPNHPDYYPSKRECIWHFTT  113 (186)
Q Consensus        94 sp~~p~~y~~~~~C~w~i~~  113 (186)
                      +.+.++.| ....|.-.-..
T Consensus      1303 c~Cp~ge~-e~prC~v~trS 1321 (2531)
T KOG4289|consen 1303 CHCPYGEF-EDPRCEVTTRS 1321 (2531)
T ss_pred             ccCCCccc-CCCceEEEeec
Confidence            88877754 34566655444

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.02  E-value=0.00063  Score=36.49  Aligned_cols=29  Identities=55%  Similarity=1.263  Sum_probs=20.9

Q ss_pred             ccccccCcc--cccccCCCceEEEecCCeee
Q psy2974          41 CMTNNGGCQ--HECRNTIGSYICSCHNGYTL   69 (186)
Q Consensus        41 C~~~~~~C~--~~C~n~~g~~~C~C~~G~~l   69 (186)
                      |...++.|.  ..|.++.++|.|.|.+||..
T Consensus         1 C~~~~~~C~~nA~C~~~~~~~~C~C~~Gy~G   31 (36)
T PF12947_consen    1 CLENNGGCHPNATCTNTGGSYTCTCKPGYEG   31 (36)
T ss_dssp             TTTGGGGS-TTCEEEE-TTSEEEEE-CEEEC
T ss_pred             CCCCCCCCCCCcEeecCCCCEEeECCCCCcc
Confidence            344556674  68999999999999999984

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>KOG1214|consensus

Probab=96.79  E-value=0.00083  Score=59.22  Aligned_cols=48  Identities=40%  Similarity=0.881  Sum_probs=39.4

Q ss_pred             cEEEcCCCCCccccccccccccCcc--cccccCCCceEEEecCCeeeecccccccc
Q psy2974          25 VFSKIGDSFKSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      ||  ++||..|.|++||..  ..|.  ..|.|++++|.|.|.+||.  .++..|.+
T Consensus       816 Gf--sGDG~~c~dvDeC~p--srChp~A~CyntpgsfsC~C~pGy~--GDGf~CVP  865 (1289)
T KOG1214|consen  816 GF--SGDGHQCTDVDECSP--SRCHPAATCYNTPGSFSCRCQPGYY--GDGFQCVP  865 (1289)
T ss_pred             Cc--cCCccccccccccCc--cccCCCceEecCCCcceeecccCcc--CCCceecC
Confidence            65  478999999999985  4564  6999999999999999997  45667764

>KOG1219|consensus

Probab=96.65  E-value=0.0029  Score=61.27  Aligned_cols=91  Identities=20%  Similarity=0.406  Sum_probs=62.6

Q ss_pred             CCccCcCCCCCCCCCCCCCC-cEEE----cCCCCCcc-ccccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974           5 DPRIEDKCNNCNESPHDTLT-VFSK----IGDSFKSQ-DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus         5 ~~~~~~~C~~c~~~~~~~~~-Gy~~----~~d~~~C~-d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      |++-.--|-+ .+.|..++. ||.-    .-.|+.|+ +++.|..+|..-.++|....++|.|.|+.||.    |..|+.
T Consensus      3865 d~C~~npCqh-gG~C~~~~~ggy~CkCpsqysG~~CEi~~epC~snPC~~GgtCip~~n~f~CnC~~gyT----G~~Ce~ 3939 (4289)
T KOG1219|consen 3865 DPCNDNPCQH-GGTCISQPKGGYKCKCPSQYSGNHCEIDLEPCASNPCLTGGTCIPFYNGFLCNCPNGYT----GKRCEA 3939 (4289)
T ss_pred             cccccCcccC-CCEecCCCCCceEEeCcccccCcccccccccccCCCCCCCCEEEecCCCeeEeCCCCcc----Cceeec
Confidence            4455555632 456666655 6622    22377784 67779887655578999999999999999997    556653


Q ss_pred             --------CCc--ceeecCCCCcccCCCCCCC
Q psy2974          79 --------GGC--KYEITAPNGVIKTPNHPDY  100 (186)
Q Consensus        79 --------~~C--~~~~~~~~G~i~sp~~p~~  100 (186)
                              ..|  ++.|.+..|++.|-+-|++
T Consensus      3940 ~Gi~eCs~n~C~~gg~C~n~~gsf~CncT~g~ 3971 (4289)
T KOG1219|consen 3940 RGISECSKNVCGTGGQCINIPGSFHCNCTPGI 3971 (4289)
T ss_pred             ccccccccccccCCceeeccCCceEeccChhH
Confidence                    334  3567888999988777764

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=96.54  E-value=0.0029  Score=33.57  Aligned_cols=30  Identities=53%  Similarity=1.109  Sum_probs=23.3

Q ss_pred             cccccccccCc--ccccccCCCceEEEecCCee
Q psy2974          38 KDECMTNNGGC--QHECRNTIGSYICSCHNGYT   68 (186)
Q Consensus        38 ~~eC~~~~~~C--~~~C~n~~g~~~C~C~~G~~   68 (186)
                      +++|... ..|  .+.|.+..++|.|.|+.||.
T Consensus         2 ~~~C~~~-~~C~~~~~C~~~~~~~~C~C~~g~~   33 (38)
T cd00054           2 IDECASG-NPCQNGGTCVNTVGSYRCSCPPGYT   33 (38)
T ss_pred             cccCCCC-CCcCCCCEeECCCCCeEeECCCCCc
Confidence            5667652 245  46899999999999999986

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>KOG4292|consensus

Probab=96.37  E-value=0.0045  Score=51.38  Aligned_cols=45  Identities=24%  Similarity=0.525  Sum_probs=40.3

Q ss_pred             CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEecc
Q psy2974          79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNP  123 (186)
Q Consensus        79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~  123 (186)
                      ..|+...+...|.+.||+||..|+++..|+|.+.++.++.|.+.|
T Consensus       290 ~~C~~~~~~~~G~~~Sp~yp~~y~~~l~Ct~~l~~~~g~~l~v~f  334 (454)
T KOG4292|consen  290 SDCNRTYHGKFGNLTSPGYPQNYPNNLDCTTHLTVPGGHTLVVFF  334 (454)
T ss_pred             cccccceecceeEEcCCCCcccCCCCCcceEEEEcCCCCEEEEEe
Confidence            457777777789999999999999999999999999999998775

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.29  E-value=0.0043  Score=32.59  Aligned_cols=24  Identities=58%  Similarity=1.142  Sum_probs=20.5

Q ss_pred             cCccc-ccccCCCceEEEecCCeee
Q psy2974          46 GGCQH-ECRNTIGSYICSCHNGYTL   69 (186)
Q Consensus        46 ~~C~~-~C~n~~g~~~C~C~~G~~l   69 (186)
                      ..|.+ .|++..++|.|.|++||.+
T Consensus         6 ~~C~~~~C~~~~~~~~C~C~~g~~g   30 (35)
T smart00181        6 GPCSNGTCINTPGSYTCSCPPGYTG   30 (35)
T ss_pred             CCCCCCEEECCCCCeEeECCCCCcc
Confidence            35665 8999999999999999975

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=95.66  E-value=0.013  Score=30.44  Aligned_cols=19  Identities=42%  Similarity=1.020  Sum_probs=17.3

Q ss_pred             cccccCC-CceEEEecCCee
Q psy2974          50 HECRNTI-GSYICSCHNGYT   68 (186)
Q Consensus        50 ~~C~n~~-g~~~C~C~~G~~   68 (186)
                      ++|+... ++|.|.|++||.
T Consensus        10 g~C~~~~~~~y~C~C~~G~~   29 (32)
T PF00008_consen   10 GTCIDLPGGGYTCECPPGYT   29 (32)
T ss_dssp             EEEEEESTSEEEEEEBTTEE
T ss_pred             eEEEeCCCCCEEeECCCCCc
Confidence            5899888 999999999996

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=95.27  E-value=0.02  Score=29.65  Aligned_cols=24  Identities=50%  Similarity=0.956  Sum_probs=19.8

Q ss_pred             cCcc--cccccCCCceEEEecCCeee
Q psy2974          46 GGCQ--HECRNTIGSYICSCHNGYTL   69 (186)
Q Consensus        46 ~~C~--~~C~n~~g~~~C~C~~G~~l   69 (186)
                      ..|.  +.|++..++|.|.|+.||..
T Consensus         6 ~~C~~~~~C~~~~~~~~C~C~~g~~g   31 (36)
T cd00053           6 NPCSNGGTCVNTPGSYRCVCPPGYTG   31 (36)
T ss_pred             CCCCCCCEEecCCCCeEeECCCCCcc
Confidence            3454  68999999999999999974

>KOG1219|consensus

Probab=94.86  E-value=0.016  Score=56.58  Aligned_cols=40  Identities=28%  Similarity=0.591  Sum_probs=32.8

Q ss_pred             cEEEcCCCCCcc--ccccccccccCcccccccCCCceEEEecCCee
Q psy2974          25 VFSKIGDSFKSQ--DKDECMTNNGGCQHECRNTIGSYICSCHNGYT   68 (186)
Q Consensus        25 Gy~~~~d~~~C~--d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~   68 (186)
                      ||.    |..|+  +++||..+...-.+.|.|.+|+|+|.|-+||.
T Consensus      3931 gyT----G~~Ce~~Gi~eCs~n~C~~gg~C~n~~gsf~CncT~g~~ 3972 (4289)
T KOG1219|consen 3931 GYT----GKRCEARGISECSKNVCGTGGQCINIPGSFHCNCTPGIL 3972 (4289)
T ss_pred             Ccc----CceeecccccccccccccCCceeeccCCceEeccChhHh
Confidence            565    77785  48899986544468999999999999999997

>PF02408 CUB_2: CUB-like domain; InterPro: IPR003366 This domain is found in a family of hypothetical Caenorhabditis elegans proteins

Probab=93.29  E-value=0.42  Score=32.79  Aligned_cols=25  Identities=16%  Similarity=0.513  Sum_probs=21.6

Q ss_pred             CCCCCCceEEEEEcCCCCEEEeccC
Q psy2974         100 YYPSKRECIWHFTTTPGHRIKLNPT  124 (186)
Q Consensus       100 ~y~~~~~C~w~i~~~~g~~i~l~~~  124 (186)
                      .++.+..|.|.|.+|.|..++|.+.
T Consensus        37 ~~p~n~~C~y~i~iP~G~~a~v~~~   61 (120)
T PF02408_consen   37 QFPANQNCTYQINIPKGYYAKVTLS   61 (120)
T ss_pred             ccCCCCceEEEEEcCCceEEEEEEE
Confidence            3678899999999999999888754

The aligned region has no known function nor do any of the proteins which possess it. However, this domain is related to the CUB domain (IPR000859 from INTERPRO). The aligned region is approximately 130 amino acids long and contains two conserved cysteine residues.

>KOG4292|consensus

Probab=92.63  E-value=0.21  Score=41.79  Aligned_cols=71  Identities=27%  Similarity=0.417  Sum_probs=49.2

Q ss_pred             eeec-CCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccCce------eeeCCeEEEEEEeCCCCCCCCcEEEEE
Q psy2974          83 YEIT-APNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTDI------ISISEGLLVRFRSDDTVVGKGFSASYI  153 (186)
Q Consensus        83 ~~~~-~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~~~------~s~~~~l~i~f~sd~~~~~~GF~~~y~  153 (186)
                      .++. +..|.+.+|++|..|.....|.|.+.+++++++.|++-.+      ..-.......|.++.+....++...+.
T Consensus       171 ~t~~~q~sg~~~~~~~p~~~v~s~~c~Wli~t~p~q~l~irv~~~~~~pt~n~c~s~~L~i~m~~~s~~~~~~~~~~~  248 (454)
T KOG4292|consen  171 ITFTTQNSGSIPSPNDPDTYVASSICNWLIDTPPGQRLYIRVVHLHLAPTINECESASLTIFMSYKSEKYGGHGNSRP  248 (454)
T ss_pred             eeecCcccccccCCCCcccccccchhhhhhhcCCCcceeEEEEeccCCcccccccceeEEEEeccCCcccccccCcCh
Confidence            3443 4459999999999999999999999999999998885432      111223444566666666655544433

>PF09064 Tme5_EGF_like: Thrombomodulin like fifth domain, EGF-like; InterPro: IPR015149 This domain adopts a fold similar to other EGF domains, with a flat major and a twisted minor beta sheet

Probab=91.92  E-value=0.16  Score=26.50  Aligned_cols=26  Identities=31%  Similarity=0.703  Sum_probs=17.9

Q ss_pred             cCcccccccCCCceEEEecCCeeeecc
Q psy2974          46 GGCQHECRNTIGSYICSCHNGYTLLEN   72 (186)
Q Consensus        46 ~~C~~~C~n~~g~~~C~C~~G~~l~~~   72 (186)
                      ..|.+.|..- ....|.||.||.+..+
T Consensus         6 t~CpA~CDpn-~~~~C~CPeGyIlde~   31 (34)
T PF09064_consen    6 TECPADCDPN-SPGQCFCPEGYILDEG   31 (34)
T ss_pred             ccCCCccCCC-CCCceeCCCceEecCC
Confidence            3567777532 2337999999998754

Disulphide pairing, however, is not of the usual 1-3, 2-4, 5-6 type; rather 1-2, 3-4, 5-6 pairing is found. Its extended major sheet (strands beta-2 and beta-3 and the connecting loop) projects into thrombin's active site groove. This domain is required for interaction of thrombomodulin with thrombin, and subsequent activation of protein-C []. ; GO: 0004888 transmembrane signaling receptor activity, 0016021 integral to membrane

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=91.15  E-value=0.2  Score=20.43  Aligned_cols=9  Identities=44%  Similarity=1.250  Sum_probs=6.8

Q ss_pred             EEEecCCee
Q psy2974          60 ICSCHNGYT   68 (186)
Q Consensus        60 ~C~C~~G~~   68 (186)
                      .|.|++||.
T Consensus         1 ~C~C~~G~~    9 (13)
T PF12661_consen    1 TCQCPPGWT    9 (13)
T ss_dssp             EEEE-TTEE
T ss_pred             CccCcCCCc
Confidence            489999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	186
3dem_A	278	Cub1-egf-cub2 Domain Of Human Masp-1/3 Length = 278		5e-10
4aqb_A	361	Mbl-Ficolin Associated Protein-1, Map-1 Aka Map44 L		6e-10
1nt0_A	286	Crystal Structure Of The Cub1-Egf-Cub2 Region Of Ma		2e-09
3v65_B	386	Crystal Structure Of Agrin And Lrp4 Complex Length		2e-05
2wno_A	149	X-Ray Structure Of Cub_c Domain From Tsg-6 Length =		1e-04
1szb_A	170	Crystal Structure Of The Human Mbl-Associated Prote		1e-04
4dg6_A	616	Crystal Structure Of Domains 1 And 2 Of Lrp6 Length		2e-04
3s94_A	619	Crystal Structure Of Lrp6-E1e2 Length = 619		2e-04
3sob_B	316	The Structure Of The First Ywtd Beta Propeller Doma		4e-04
1apq_A	53	Structure Of The Egf-Like Module Of Human C1r, Nmr,		6e-04
3kq4_B	457	Structure Of Intrinsic Factor-Cobalamin Bound To It		8e-04

>pdb|3DEM|A Chain A, Cub1-egf-cub2 Domain Of Human Masp-1/3 Length = 278

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Query: 26  FSKIGDSFKSQDKDECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCK 82
           F+     + + D DEC         C H C N IG Y CSC  GY L  +   C+     
Sbjct: 109 FTGFDAHYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSD 168
Query: 83  YEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTDIISISE 131
              T   GVI +P+ P+ YP   EC++      G  + L   DI  I +
Sbjct: 169 NLFTQRTGVITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIED 217

>pdb|4AQB|A Chain A, Mbl-Ficolin Associated Protein-1, Map-1 Aka Map44 Length = 361

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Query: 26  FSKIGDSFKSQDKDECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCK 82
           F+     + + D DEC         C H C N IG Y CSC  GY L  +   C+     
Sbjct: 109 FTGFDAHYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSD 168
Query: 83  YEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTDIISISE 131
              T   GVI +P+ P+ YP   EC++      G  + L   DI  I +
Sbjct: 169 NLFTQRTGVITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIED 217

>pdb|1NT0|A Chain A, Crystal Structure Of The Cub1-Egf-Cub2 Region Of Masp2 Length = 286

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 16  NESPHDTLTVFSKIGDSFKSQDKDECMTNNG---GCQHECRNTIGSYICSCHNGYTLLEN 72
           NE P      F      + ++D DEC T+ G    C H C   +G Y CSC  GY L +N
Sbjct: 104 NEKPFTGFEAF------YAAEDVDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQN 157
Query: 73  GHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN 122
            H C         T  +G + +P +P  YP    C ++     G  I L+
Sbjct: 158 KHTCSALCSGQVFTGRSGFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLD 207

>pdb|3V65|B Chain B, Crystal Structure Of Agrin And Lrp4 Complex Length = 386

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 38  KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK-------EGGCKYEITAPNG 90
           ++ C  NNGGC  +C+   G+  C+CH GY L E+G  C+       EG C    T   G
Sbjct: 3   EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEG 62
Query: 91  VIKTPNHPDY--YPSKREC 107
             +      Y   P +R C
Sbjct: 63  AFQCWCEAGYELRPDRRSC 81

>pdb|2WNO|A Chain A, X-Ray Structure Of Cub_c Domain From Tsg-6 Length = 149

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 39/114 (34%), Gaps = 38/114 (33%)
Query: 81  CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN------------------ 122
           C    T P  + K+P  P+ Y   + C WH     G RI L+                  
Sbjct: 7   CGGVFTDPKQIFKSPGFPNEYEDNQICYWHIRLKYGQRIHLSFLDFDLEDDPGCLADYVE 66
Query: 123 --------------------PTDIISISEGLLVRFRSDDTVVGKGFSASYIAID 156
                               P DIIS    + ++F SD +V   GF   Y+A+D
Sbjct: 67  IYDSYDDVHGFVGRYCGDELPDDIISTGNVMTLKFLSDASVTAGGFQIKYVAMD 120

>pdb|1SZB|A Chain A, Crystal Structure Of The Human Mbl-Associated Protein 19 (Map19) Length = 170

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 8   IEDKCNNCNESPHDTLTVFSKIGDSFKSQDKDECMTNNG---GCQHECRNTIGSYICSCH 64
           I  + +  NE P      F      + ++D DEC    G    C H C N +G + CSC 
Sbjct: 100 ITFRSDYSNEKPFTGFEAF------YAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCR 153
Query: 65  NGYTLLENGHDCKE 78
            GY L  N   C E
Sbjct: 154 AGYVLHRNKRTCSE 167

>pdb|4DG6|A Chain A, Crystal Structure Of Domains 1 And 2 Of Lrp6 Length = 616

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 39  DECMTNNGGCQHECRNTIGS--YICSCHNGYTLLENGHDCKEGGCKYEITA 87
           + C  +NGGC H C  +     Y C+C  G  LLENG  CK+G  +  + A
Sbjct: 265 NPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLA 315

>pdb|3S94|A Chain A, Crystal Structure Of Lrp6-E1e2 Length = 619

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 39  DECMTNNGGCQHECRNTIGS--YICSCHNGYTLLENGHDCKEGGCKYEITA 87
           + C  +NGGC H C  +     Y C+C  G  LLENG  CK+G  +  + A
Sbjct: 273 NPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLA 323

>pdb|3SOB|B Chain B, The Structure Of The First Ywtd Beta Propeller Domain Of Lrp6 In Complex With A Fab Length = 316

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 41  CMTNNGGCQHECRNTIGS--YICSCHNGYTLLENGHDCKEGGCKYEITA 87
           C  +NGGC H C  +     Y C+C  G  LLENG  CK+G  +  + A
Sbjct: 267 CGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLA 315

>pdb|1APQ|A Chain A, Structure Of The Egf-Like Module Of Human C1r, Nmr, 19 Structures Length = 53

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 37 DKDECMTNNGG--------CQHECRNTIGSYICSCHNGYTLLENGHDCK 77
          D DEC + +          CQH C N +G Y CSC  GY L E+ H C+
Sbjct: 3  DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51

>pdb|3KQ4|B Chain B, Structure Of Intrinsic Factor-Cobalamin Bound To Its Receptor Cubilin Length = 457

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 81  CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKL 121
           C   +T   G I++P HP+ YP    C WH    P H I L
Sbjct: 1   CGEILTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHL 41

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	186
3dem_A	278	Complement factor MAsp-3; complement system, innat	2e-28
3dem_A	278	Complement factor MAsp-3; complement system, innat	2e-12
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	6e-25
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	6e-11
1nt0_A	286	MAsp2, mannose-binding protein associated serine p	7e-25
1nt0_A	286	MAsp2, mannose-binding protein associated serine p	3e-08
2wno_A	149	Tumor necrosis factor-inducible gene 6 protein; gl	5e-19
2qqm_A	450	Neuropilin-1; VEGF receptor, semaphorin receptor,	3e-18
3poj_A	115	Mannan-binding lectin serine protease 1; CUB domai	4e-17
3kq4_B	457	Cubilin; protein-protein complex, cobalt, cobalt t	3e-16
3kq4_B	457	Cubilin; protein-protein complex, cobalt, cobalt t	5e-16
3kq4_B	457	Cubilin; protein-protein complex, cobalt, cobalt t	2e-11
3kq4_B	457	Cubilin; protein-protein complex, cobalt, cobalt t	1e-08
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	2e-15
1spp_A	109	Major seminal plasma glycoprotein PSP-I; seminal p	2e-15
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	4e-15
2qqo_A	460	Neuropilin-2; VEGF receptor, semaphorin receptor,	6e-15
1spp_B	116	Major seminal plasma glycoprotein PSP-II; seminal	2e-14
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	2e-14
1sfp_A	114	ASFP; spermadhesin, bovine seminal plasma protein,	3e-14
2qqk_A	579	Neuropilin-2; VEGF receptor, semaphorin receptor,	1e-13
2qqk_A	579	Neuropilin-2; VEGF receptor, semaphorin receptor,	9e-12
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	1e-13
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	4e-13
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	5e-10
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	4e-13
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	4e-12
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	4e-12
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	6e-10
1aut_L	114	Activated protein C; serine proteinase, plasma cal	4e-12
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	5e-12
2wph_E	59	Coagulation factor IXA light chain; serine proteas	8e-12
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	1e-11
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	5e-11
3v65_B	386	Low-density lipoprotein receptor-related protein;	1e-11
3v65_B	386	Low-density lipoprotein receptor-related protein;	1e-06
3v65_B	386	Low-density lipoprotein receptor-related protein;	9e-06
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	1e-11
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-11
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	4e-09
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-07
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	2e-11
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	9e-10
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	1e-05
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	4e-10
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	9e-08
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	2e-06
1nzi_A	159	Complement C1S component; calcium, innate immunity	7e-10
1nzi_A	159	Complement C1S component; calcium, innate immunity	7e-08
1szb_A	170	Mannose binding lectin-associated serine protease-	1e-09
1szb_A	170	Mannose binding lectin-associated serine protease-	1e-07
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	1e-08
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	4e-07
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	4e-04
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	7e-08
2vh0_B	134	Activated factor XA light chain; serine protease,	1e-07
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	1e-07
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	7e-04
2bou_A	143	EGF-like module containing mucin-like hormone rece	1e-07
2bou_A	143	EGF-like module containing mucin-like hormone rece	7e-07
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	2e-07
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	5e-07
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	3e-04
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	1e-06
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	7e-06
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	1e-05
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	1e-04
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	2e-04
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	2e-04
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	3e-04
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	3e-04
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	8e-04

>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens} Length = 278

 Score =  106 bits (265), Expect = 2e-28
 Identities = 41/163 (25%), Positives = 58/163 (35%), Gaps = 40/163 (24%)

Query: 32  SFKSQDKDECM---TNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAP 88
            + + D DEC         C H C N IG Y CSC  GY L  +   C+        T  
Sbjct: 115 HYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQR 174

Query: 89  NGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN-------------------------- 122
            GVI +P+ P+ YP   EC++      G  + L                           
Sbjct: 175 TGVITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGP 234

Query: 123 -----------PTDIISISEGLLVRFRSDDTVVGKGFSASYIA 154
                      P  I + S  +L+ F SD++   +G+  SY A
Sbjct: 235 KVLGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGWRLSYRA 277

>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens} Length = 278

 Score = 63.0 bits (153), Expect = 2e-12
 Identities = 28/119 (23%), Positives = 40/119 (33%), Gaps = 44/119 (36%)

Query: 83  YEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN-------------------- 122
            E+    G I++P +PD YPS  E  W+ T   G RIKL                     
Sbjct: 3   VELNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVE 62

Query: 123 ----------------------PTDIISISEGLLVRFRSDDTV--VGKGFSASYIAIDT 157
                                    ++S    + + FRSD +      GF A Y+A+D 
Sbjct: 63  TEDQVLATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDV 121

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens} Length = 361

 Score = 98.1 bits (244), Expect = 6e-25
 Identities = 41/169 (24%), Positives = 59/169 (34%), Gaps = 40/169 (23%)

Query: 32  SFKSQDKDECM---TNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAP 88
            + + D DEC         C H C N IG Y CSC  GY L  +   C+        T  
Sbjct: 115 HYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQR 174

Query: 89  NGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN-------------------------- 122
            GVI +P+ P+ YP   EC++      G  + L                           
Sbjct: 175 TGVITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGP 234

Query: 123 -----------PTDIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGS 160
                      P  I + S  +L+ F SD++   +G+  SY A   +  
Sbjct: 235 KVLGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGWRLSYRAAGNECP 283

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens} Length = 361

 Score = 59.2 bits (143), Expect = 6e-11
 Identities = 28/119 (23%), Positives = 40/119 (33%), Gaps = 44/119 (36%)

Query: 83  YEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN-------------------- 122
            E+    G I++P +PD YPS  E  W+ T   G RIKL                     
Sbjct: 3   VELNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVE 62

Query: 123 ----------------------PTDIISISEGLLVRFRSDDTV--VGKGFSASYIAIDT 157
                                    ++S    + + FRSD +      GF A Y+A+D 
Sbjct: 63  TEDQVLATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDV 121

>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1 Length = 286

 Score = 97.0 bits (241), Expect = 7e-25
 Identities = 37/164 (22%), Positives = 58/164 (35%), Gaps = 40/164 (24%)

Query: 33  FKSQDKDECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPN 89
           + ++D DEC T+ G    C H C   +G Y CSC  GY L +N H C         T  +
Sbjct: 115 YAAEDVDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHTCSALCSGQVFTGRS 174

Query: 90  GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN--------------------------- 122
           G + +P +P  YP    C ++     G  I L+                           
Sbjct: 175 GFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHPEAQCPYDSLKIQTDKR 234

Query: 123 ----------PTDIISISEGLLVRFRSDDTVVGKGFSASYIAID 156
                     P  I + S  + + F +D++    G+   Y +  
Sbjct: 235 EYGPFCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTSTA 278

>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1 Length = 286

 Score = 51.1 bits (122), Expect = 3e-08
 Identities = 16/108 (14%), Positives = 26/108 (24%), Gaps = 42/108 (38%)

Query: 87  APNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN------------------------ 122
              G + +P  P+ Y + ++  W  T  PG R++L                         
Sbjct: 6   PVFGRLVSPGFPEKYGNHQDRSWTLTAPPGFRLRLYFTHFNLELSYRCEYDFVKLTSGTK 65

Query: 123 ------------------PTDIISISEGLLVRFRSDDTVVGKGFSASY 152
                                  S+   L V F SD +          
Sbjct: 66  VLATLCGQESTDTERAPGNDTFYSLGPSLKVTFHSDYSNEKPFTGFEA 113

>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens} Length = 149

 Score = 78.2 bits (193), Expect = 5e-19
 Identities = 28/115 (24%), Positives = 39/115 (33%), Gaps = 38/115 (33%)

Query: 80  GCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN----------------- 122
            C    T P  + K+P  P+ Y   + C WH     G RI L+                 
Sbjct: 6   ECGGVFTDPKQIFKSPGFPNEYEDNQICYWHIRLKYGQRIHLSFLDFDLEDDPGCLADYV 65

Query: 123 ---------------------PTDIISISEGLLVRFRSDDTVVGKGFSASYIAID 156
                                P DIIS    + ++F SD +V   GF   Y+A+D
Sbjct: 66  EIYDSYDDVHGFVGRYCGDELPDDIISTGNVMTLKFLSDASVTAGGFQIKYVAMD 120

>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1 Length = 450

 Score = 80.1 bits (197), Expect = 3e-18
 Identities = 30/124 (24%), Positives = 40/124 (32%), Gaps = 45/124 (36%)

Query: 74  HDCKEG-GCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN---------- 122
           H  K G  C    T P+GVIK+P  P+ YP+  EC +         I L           
Sbjct: 3   HMFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDS 62

Query: 123 ----------------------------------PTDIISISEGLLVRFRSDDTVVGKGF 148
                                             P  I S S  L + F +D  +  +GF
Sbjct: 63  NPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGF 122

Query: 149 SASY 152
           SA+Y
Sbjct: 123 SANY 126

>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A Length = 115

 Score = 72.3 bits (178), Expect = 4e-17
 Identities = 22/107 (20%), Positives = 35/107 (32%), Gaps = 37/107 (34%)

Query: 85  ITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN---------------------- 122
            T   G I +P++P+ YP   EC +      G  + L                       
Sbjct: 9   FTQRTGTITSPDYPNPYPKSSECSYTIDLEEGFMVTLQFEDIFDIEDHPEVPCPYDYIKI 68

Query: 123 ---------------PTDIISISEGLLVRFRSDDTVVGKGFSASYIA 154
                          P  I + S  + + FRSD++   +G+  SY A
Sbjct: 69  KAGSKVWGPFCGEKSPEPISTQSHSIQILFRSDNSGENRGWRLSYRA 115

>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens} Length = 457

 Score = 74.5 bits (183), Expect = 3e-16
 Identities = 24/123 (19%), Positives = 38/123 (30%), Gaps = 38/123 (30%)

Query: 74  HDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN----------- 122
            D    GC   +T  +G   +PN+P  Y    EC W   ++ G   +L            
Sbjct: 227 WDGSSTGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPN 286

Query: 123 ---------------------------PTDIISISEGLLVRFRSDDTVVGKGFSASYIAI 155
                                      P  I S  + + ++ R+D+   G+GF A Y   
Sbjct: 287 CTLDYLAVYDGPSSNSHLLTQLCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQT 346

Query: 156 DTQ 158
              
Sbjct: 347 CEN 349

>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens} Length = 457

 Score = 73.8 bits (181), Expect = 5e-16
 Identities = 26/114 (22%), Positives = 37/114 (32%), Gaps = 36/114 (31%)

Query: 81  CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN------------------ 122
           C   +T   G I++P HP+ YP    C WH    P H I L                   
Sbjct: 1   CGEILTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHLMFETFHLEFHYNCTNDYLE 60

Query: 123 ------------------PTDIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQ 158
                             P  + S    L++ F +D  +  +GF  +Y AI   
Sbjct: 61  VYDTDSETSLGRYCGKSIPPSLTSSGNSLMLVFVTDSDLAYEGFLINYEAISAA 114

>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens} Length = 457

 Score = 61.1 bits (148), Expect = 2e-11
 Identities = 15/107 (14%), Positives = 28/107 (26%), Gaps = 35/107 (32%)

Query: 81  CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN------------------ 122
               +    G++++  +P+ Y   + C W    T G+ +                     
Sbjct: 349 NVVIVNQTYGILESIGYPNPYSENQHCNWTIRATTGNTVNYTFLAFDLEHHINCSTDYLE 408

Query: 123 ----------------PTDIISISEGLLVRFRSDDTVV-GKGFSASY 152
                           P    + S  L V   +D      KGF   +
Sbjct: 409 LYDGPRQMGRYCGVDLPPPGSTTSSKLQVLLLTDGVGRREKGFQMQW 455

>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens} Length = 457

 Score = 52.6 bits (126), Expect = 1e-08
 Identities = 28/121 (23%), Positives = 39/121 (32%), Gaps = 39/121 (32%)

Query: 76  CKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN------------- 122
                C  + T   G   +PN P+ YP+  ECI+  T   G  I ++             
Sbjct: 112 SAATACLQDYTDDLGTFTSPNFPNNYPNNWECIYRITVRTGQLIAVHFTNFSLEEAIGNY 171

Query: 123 --------------------------PTDIISISEGLLVRFRSDDTVVGKGFSASYIAID 156
                                     P  IIS S  L ++F+SD      GFSA +    
Sbjct: 172 YTDFLEIRDGGYEKSPLLGIFYGSNLPPTIISHSNKLWLKFKSDQIDTRSGFSAYWDGSS 231

Query: 157 T 157
           T
Sbjct: 232 T 232

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... Length = 55

 Score = 66.3 bits (162), Expect = 2e-15
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 38 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
          +  C  +NG C   C     S +CSC  GYTL +NG  C  
Sbjct: 1  RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 41

>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Length = 109

 Score = 67.8 bits (166), Expect = 2e-15
 Identities = 14/107 (13%), Positives = 30/107 (28%), Gaps = 36/107 (33%)

Query: 80  GCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN----------------- 122
            C   +T   G I T   P       EC+W     P +++ ++                 
Sbjct: 5   ACGGRLTDDYGTIFTYKGPK-----TECVWTLQVDPKYKLLVSIPTLNLTCGKEYVEVLE 59

Query: 123 --------------PTDIISISEGLLVRFRSDDTVVGKGFSASYIAI 155
                          + +   S G+ V+++ D       +   ++  
Sbjct: 60  GAPGSKSLGKFCEGLSILNRGSSGMTVKYKRDSGHPASPYEIIFLRD 106

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Length = 53

 Score = 65.2 bits (159), Expect = 4e-15
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 8/49 (16%)

Query: 37 DKDECMTNNGG--------CQHECRNTIGSYICSCHNGYTLLENGHDCK 77
          D DEC + +          CQH C N +G Y CSC  GY L E+ H C+
Sbjct: 3  DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51

>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens} Length = 460

 Score = 70.9 bits (173), Expect = 6e-15
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 75  DCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN 122
           D     C    T+PNG I++P  P+ YP   +C +     P   I L 
Sbjct: 2   DPGSEDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQ 49

>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1 Length = 116

 Score = 65.5 bits (160), Expect = 2e-14
 Identities = 11/114 (9%), Positives = 25/114 (21%), Gaps = 38/114 (33%)

Query: 80  GCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN----------------- 122
            C   I   +G I   +          C W     P  ++++                  
Sbjct: 8   ECGRVIKDTSGSISNTDRQKNL-----CTWTILMKPDQKVRMAIPYLNLACGKEYVEVFD 62

Query: 123 ---------------PTDIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSK 161
                              +S +  + +++          F   +      GS+
Sbjct: 63  GLLSGPSYGKLCAGAAIVFLSTANTMTIKYNRISGNSSSPFLIYFYGSS-PGSE 115

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1 Length = 51

 Score = 63.5 bits (155), Expect = 2e-14
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 41 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 76
          C  +NGGC   CR       CSC +GY L ++   C
Sbjct: 1  CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSC 36

>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1 Length = 114

 Score = 65.0 bits (159), Expect = 3e-14
 Identities = 14/111 (12%), Positives = 28/111 (25%), Gaps = 37/111 (33%)

Query: 77  KEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN-------------- 122
           +   C   +   +GVI T      Y  K  C+W     P + ++++              
Sbjct: 6   RNTNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQLNCNKESLE 60

Query: 123 ------------------PTDIISISEGLLVRFRSDDTVVGKGFSASYIAI 155
                               D  S    + V++  +       +   Y   
Sbjct: 61  IIDGLPGSPVLGKICEGSLMDYRSSGSIMTVKYIREPEHPASFYEVLYFQD 111

>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A Length = 579

 Score = 67.3 bits (164), Expect = 1e-13
 Identities = 28/121 (23%), Positives = 38/121 (31%), Gaps = 40/121 (33%)

Query: 78  EGGCKYEITAPN-GVIKTPNHPDYYPSKRECIWHFT-TTPGHRIKLN------------- 122
           +  C   + + + G I +P +P  YPS + C W      P  +I LN             
Sbjct: 3   DPPCGGRLNSKDAGYITSPGYPQDYPSHQNCEWIVYAPEPNQKIVLNFNPHFEIEKHDCK 62

Query: 123 -------------------------PTDIISISEGLLVRFRSDDTVVGKGFSASYIAIDT 157
                                    P  IIS    L ++F SD    G GFS  Y    T
Sbjct: 63  YDFIEIRDGDSESADLLGKHCGNIAPPTIISSGSMLYIKFTSDYARQGAGFSLRYEIFKT 122

Query: 158 Q 158
            
Sbjct: 123 G 123

>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A Length = 579

 Score = 61.9 bits (150), Expect = 9e-12
 Identities = 25/119 (21%), Positives = 37/119 (31%), Gaps = 44/119 (36%)

Query: 78  EGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN--------------- 122
              C    T+PNG I++P  P+ YP   +C +     P   I L                
Sbjct: 124 SEDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGE 183

Query: 123 -----------------------------PTDIISISEGLLVRFRSDDTVVGKGFSASY 152
                                        P+++ S +  L + F +D  V   GFSA Y
Sbjct: 184 GDCKYDWLDIWDGIPHVGPLIGKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARY 242

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L* Length = 69

 Score = 61.7 bits (150), Expect = 1e-13
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 36 QDKDECMTNNGGCQHECRNTIGS-YICSCHNGYTLLENGHDCKE 78
           D+  C+  NGGC+  C +  G+   C CH GY+LL +G  C  
Sbjct: 3  DDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 46

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 61.1 bits (149), Expect = 4e-13
 Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 36 QDKDECMTNNGGC-QHECRNTIGSYICSCHNGYTLLENGHDC 76
          +D DEC      C    C+N  G + C C  GY        C
Sbjct: 1  KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSC 42

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 52.7 bits (127), Expect = 5e-10
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 4/44 (9%)

Query: 36 QDKDECMTNNGGCQHECRNTIGSYICSC--HNGYTLLENGHDCK 77
          +D DEC  N   C   C N  G Y C C    G+ L ++   C+
Sbjct: 43 EDIDECSENM--CAQLCVNYPGGYTCYCDGKKGFKLAQDQKSCE 84

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 61.6 bits (150), Expect = 4e-13
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 36 QDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGH 74
             +EC+ NNGGC + C +    Y C C +G+ L+    
Sbjct: 27 MGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRR 65

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 58.9 bits (143), Expect = 4e-12
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 36  QDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77
           +D DEC  +   C   C N  G Y C C  G+ L  +   CK
Sbjct: 67  EDIDEC-QDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK 107

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 58.5 bits (142), Expect = 4e-12
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 36 QDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDC 76
           D DEC  +   C+   C NT GSY C C  G+ L  N   C
Sbjct: 44 MDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 85

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 52.7 bits (127), Expect = 6e-10
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 37 DKDECMTNNGGC-QHECRNTIGSYICSCHNGYTL-LENGHDC 76
          D DEC  +   C + +C NT G + C C  GY        +C
Sbjct: 2  DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC 43

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 59.0 bits (143), Expect = 4e-12
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
              C  +NGGC H C   +G   CSC  GY L ++   C  
Sbjct: 53 SFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP 94

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L* Length = 53

 Score = 57.4 bits (139), Expect = 5e-12
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 41 CMTNNGGCQHECRNTIGS-YICSCHNGYTLLENGHDCKE 78
          C+  NGGC+  C +  G+   C CH GY+LL +G  C  
Sbjct: 2  CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 40

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B* Length = 59

 Score = 57.1 bits (138), Expect = 8e-12
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 41 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDC 76
          C   NG C+  C+N+     +CSC  GY L EN   C
Sbjct: 2  CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSC 38

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 57.2 bits (139), Expect = 1e-11
 Identities = 12/45 (26%), Positives = 17/45 (37%)

Query: 30 GDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGH 74
              +  D DEC   N      C+N IG + C+C  G+       
Sbjct: 36 LAGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGPMMT 80

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 55.3 bits (134), Expect = 5e-11
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 36 QDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 76
           D DEC   +     +C NT GSY C C  GY L   G++C
Sbjct: 3  VDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNEC 41

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 60.9 bits (147), Expect = 1e-11
 Identities = 17/42 (40%), Positives = 26/42 (61%)

Query: 37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
           ++ C  NNGGC  +C+   G+  C+CH GY L E+G  C++
Sbjct: 2  GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQD 43

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 46.3 bits (109), Expect = 1e-06
 Identities = 23/111 (20%), Positives = 33/111 (29%), Gaps = 2/111 (1%)

Query: 9   EDKCNNCNESPHDTLTV-FSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGY 67
             KC     +   T    +    D    QD +EC    G C   C N+ G++ C C  GY
Sbjct: 14  AQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNEC-AEEGYCSQGCTNSEGAFQCWCEAGY 72

Query: 68  TLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHR 118
            L  +   CK  G +  +   N +      P                    
Sbjct: 73  ELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDF 123

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 44.0 bits (103), Expect = 9e-06
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 33  FKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
            +   K+ C  NNGGC H C  +  +Y C+C  G+    N H C +
Sbjct: 342 RQPAGKNRCGDNNGGCTHLCLPSGQNYTCACPTGFR-KINSHACAQ 386

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 58.9 bits (143), Expect = 1e-11
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 26  FSKIGDSFKSQDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDC 76
           F     +   +D DEC    G CQ  +C NT GS+ C C  GY L E+   C
Sbjct: 110 FRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 161

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 58.5 bits (142), Expect = 2e-11
 Identities = 14/40 (35%), Positives = 17/40 (42%)

Query: 37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 76
          D +EC+         C NT GSYIC C   + L      C
Sbjct: 2  DVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGC 41

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 52.4 bits (126), Expect = 4e-09
 Identities = 2/44 (4%), Positives = 7/44 (15%)

Query: 34  KSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77
                 +              +    +C    G+         +
Sbjct: 77  CCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILE 120

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 10/56 (17%), Positives = 12/56 (21%), Gaps = 3/56 (5%)

Query: 26 FSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGC 81
          F          D       N       R   G   CS   G  + +    C  G  
Sbjct: 32 FELNPTRVGCVDTRSG---NCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKA 84

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 58.1 bits (141), Expect = 2e-11
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 36  QDKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDC 76
           +D DEC    G C++  C NT GS+ C C +G TL   G  C
Sbjct: 105 EDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRIC 146

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 53.5 bits (129), Expect = 9e-10
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 35 SQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 76
          S D DEC  ++      C+N+ GS+IC C +  TL      C
Sbjct: 1  SADIDEC-ESSPCINGVCKNSPGSFICECSSESTLDPTKTIC 41

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 11/66 (16%), Positives = 20/66 (30%), Gaps = 3/66 (4%)

Query: 12  CNNCNESP-HDTLTVFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLL 70
           C    +     T+       +   +  K +C  ++ G       T+      C  GY+  
Sbjct: 41  CIETIKGTCWQTVIDGRCEININGATLKSQC-CSSLGAAWGSPCTLCQVDPICGKGYS-R 98

Query: 71  ENGHDC 76
             G  C
Sbjct: 99  IKGTQC 104

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 53.9 bits (130), Expect = 4e-10
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 36  QDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLL-ENGHDC 76
            D DEC  N G C   C N  G++ C C     L  + G DC
Sbjct: 78  TDIDEC-ENGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 118

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 47.7 bits (114), Expect = 9e-08
 Identities = 9/42 (21%), Positives = 18/42 (42%), Gaps = 3/42 (7%)

Query: 36 QDKDECMTNNGGCQHECRN-TIGSYICSCHNGYTLLENGHDC 76
          +  D C      C+++C+     SY+C C  G+  + +    
Sbjct: 2  EPVDPC--FRANCEYQCQPLDQTSYLCVCAEGFAPIPHEPHR 41

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)

Query: 36 QDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 76
            + +   N   C  +C        C C  GY  L++G  C
Sbjct: 39 PHRCQMFCNQTACPADCDPN-TQASCECPEGYI-LDDGFIC 77

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 159

 Score = 54.0 bits (130), Expect = 7e-10
 Identities = 18/107 (16%), Positives = 27/107 (25%), Gaps = 42/107 (39%)

Query: 88  PNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN------------------------- 122
             G I +PN+P  YPS+ E  W      G+ I L                          
Sbjct: 4   MYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTE 63

Query: 123 -----------------PTDIISISEGLLVRFRSDDTVVGKGFSASY 152
                              +       L V F+SD +   +    + 
Sbjct: 64  EGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAA 110

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 159

 Score = 48.7 bits (116), Expect = 7e-08
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 32  SFKSQDKDECM-TNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77
            + + D +EC    +  C H C N IG Y CSC   Y L ++  +C 
Sbjct: 111 YYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG 157

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 170

 Score = 53.8 bits (129), Expect = 1e-09
 Identities = 24/125 (19%), Positives = 35/125 (28%), Gaps = 45/125 (36%)

Query: 80  GCKYEITAP-NGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN---------------- 122
               +   P  G + +P  P  Y + +E  W  T  PG+R++L                 
Sbjct: 2   PLGPKWPEPVFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDF 61

Query: 123 --------------------------PTDIISISEGLLVRFRSDDTVV--GKGFSASYIA 154
                                          S+   L + FRSD +      GF A Y A
Sbjct: 62  VKLSSGAKVLATLCGQESTDTERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAA 121

Query: 155 IDTQG 159
            D   
Sbjct: 122 EDIDE 126

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 170

 Score = 48.4 bits (115), Expect = 1e-07
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 32  SFKSQDKDECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
            + ++D DEC    G    C H C N +G + CSC  GY L  N   C E
Sbjct: 118 FYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 167

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 52.5 bits (125), Expect = 1e-08
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 39 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGH 74
          +EC+ NNGGC H C +    Y C C +G+ L+    
Sbjct: 1  NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRR 36

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 48.3 bits (114), Expect = 4e-07
 Identities = 20/109 (18%), Positives = 29/109 (26%), Gaps = 1/109 (0%)

Query: 9   EDKCNNCNESPHDTLTVFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYT 68
              CN+             ++    + +D DEC  +   C   C N  G Y C C  G+ 
Sbjct: 11  SHVCNDLKIGYECLCPDGFQLVAQRRCEDIDEC-QDPDTCSQLCVNLEGGYKCQCEEGFQ 69

Query: 69  LLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGH 117
           L  +   CK  G    +   N         D                  
Sbjct: 70  LDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALD 118

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 39.1 bits (90), Expect = 4e-04
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 6/43 (13%)

Query: 40  ECMTNNGGCQHECRNT------IGSYICSCHNGYTLLENGHDC 76
               +NGGCQ+ C            + C+C +G  L  +   C
Sbjct: 354 RTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 396

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} Length = 283

 Score = 50.1 bits (120), Expect = 7e-08
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 38 KDECMT-NNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77
          K+EC      GCQH C     SY CSC  GY L E+   C 
Sbjct: 2  KNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCV 42

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 16/40 (40%), Positives = 19/40 (47%)

Query: 39  DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
             C  +NG C   C     S +CSC  GYTL +NG  C  
Sbjct: 82  KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 121

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 16/40 (40%), Positives = 19/40 (47%)

Query: 39  DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
             C  +NG C   C     S +CSC  GYTL +NG  C  
Sbjct: 82  KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 121

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 36 QDKDECMTNNGGCQHECRNTIGSYICSCHNGYT 68
          +D D+C T+    Q +C++ +G Y C+C  G+ 
Sbjct: 40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFE 72

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 47.9 bits (114), Expect = 1e-07
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 30  GDSFKSQDKDECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDC 76
                 QD DEC +    C     C NT+GSY C C  G+       + 
Sbjct: 88  ESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNN 136

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 45.6 bits (108), Expect = 7e-07
 Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 36 QDKDECMTNNGGC---QHECRNTIGSYICSCHNGYTLLENGHDCKEG 79
           D +EC T +        +C NT GSY C C  GY  +      K  
Sbjct: 42 DDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNE 88

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)

Query: 36  QDKDECMTN---NGGCQHECRNTIGS-YICSCHNGYTLLENGHDCKE 78
             KD+ +     NGGC+  C +  G+   C CH GY+LL +G  C  
Sbjct: 83  THKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 129

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score = 47.6 bits (112), Expect = 5e-07
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 39  DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHP 98
           +EC    G C   C N+ G++ C C  GY L  +   CK  G +  +   N +      P
Sbjct: 2   NEC-AEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLP 60

Query: 99  DYY 101
              
Sbjct: 61  HRS 63

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score = 39.5 bits (91), Expect = 3e-04
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 41  CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
           C  NNGGC H C  +  +Y C+C  G+  + N H C  
Sbjct: 307 CGDNNGGCTHLCLPSGQNYTCACPTGFRKI-NSHACAL 343

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} Length = 619

 Score = 46.7 bits (110), Expect = 1e-06
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 41  CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 76
           C   NGGC H C        C+C  G+ L+ +   C
Sbjct: 581 CAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTC 616

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 44.3 bits (105), Expect = 7e-06
 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 35 SQDKDECMTN-NGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGC 81
             K+EC      GCQH C     SY CSC  GY L E+   C     
Sbjct: 40 ELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQ 87

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 36  QDKDECMTNNGGCQHECRNT-IGSYICSCHNGYTLLENGHDCKE 78
            D       NG C+  C+       +CSC  GY L  +   CK 
Sbjct: 84  LDATCN-IKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKP 126

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B Length = 318

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 41  CMTNNGGCQHEC--RNTIGSYICSCHNGYTLLENGHDCKEG 79
           C  +NGGC H C        Y C+C  G  LLENG  CK+G
Sbjct: 270 CGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDG 310

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 6/44 (13%)

Query: 35 SQDKDECMTNNGGCQHE--CRNTIGSYICSCHNGYTLLENGHDC 76
          +QD DEC      C+H   C NT+GS+ C C  GYT    G  C
Sbjct: 2  AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRC 41

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A Length = 285

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 13/45 (28%), Positives = 16/45 (35%), Gaps = 4/45 (8%)

Query: 36 QDKDECMTNNGGC--QHECRNTIGSYICSCHNGYTLLENGHDCKE 78
            +  C  N   C    ECR+    + C C   YT   NG  C  
Sbjct: 3  LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVA 45

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 Length = 316

 Score = 39.7 bits (92), Expect = 3e-04
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%)

Query: 39  DECMTNNGGCQHECRNT------IGSYICSCHNGYTLLENGHDC 76
           +    +NGGCQ+ C            + C+C +G  L  +   C
Sbjct: 271 ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 314

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* Length = 628

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 1/77 (1%)

Query: 3   RLDPRIEDKCNNCNESPHDTLTVFSKIGDSFKSQDKDECMTNNGGCQHECRNT-IGSYIC 61
           ++D    +              + +    + +   +  C  +NGGC H C     G+  C
Sbjct: 544 KIDMTGREGRTKVQARIAQLSDIHAVKELNLQEYRQHPCAQDNGGCSHICLVKGDGTTRC 603

Query: 62  SCHNGYTLLENGHDCKE 78
           SC     LL++   C  
Sbjct: 604 SCPMHLVLLQDELSCGG 620

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 37.7 bits (86), Expect = 8e-04
 Identities = 10/40 (25%), Positives = 13/40 (32%)

Query: 37  DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 76
            +  C          C N  G Y C C  G+T     + C
Sbjct: 138 GETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVC 177

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	186
1nt0_A	286	MAsp2, mannose-binding protein associated serine p	99.84
3dem_A	278	Complement factor MAsp-3; complement system, innat	99.82
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	99.77
2wno_A	149	Tumor necrosis factor-inducible gene 6 protein; gl	99.66
3poj_A	115	Mannan-binding lectin serine protease 1; CUB domai	99.64
1spp_A	109	Major seminal plasma glycoprotein PSP-I; seminal p	99.51
1spp_B	116	Major seminal plasma glycoprotein PSP-II; seminal	99.49
1nzi_A	159	Complement C1S component; calcium, innate immunity	99.49
1sfp_A	114	ASFP; spermadhesin, bovine seminal plasma protein,	99.47
4gz9_A	577	Neuropilin-1, A5 protein; multi-domain, cell-CELL	99.45
1szb_A	170	Mannose binding lectin-associated serine protease-	99.44
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	99.44
2qqm_A	450	Neuropilin-1; VEGF receptor, semaphorin receptor,	99.43
2qqo_A	460	Neuropilin-2; VEGF receptor, semaphorin receptor,	99.42
3kq4_B	457	Cubilin; protein-protein complex, cobalt, cobalt t	99.38
2qqk_A	579	Neuropilin-2; VEGF receptor, semaphorin receptor,	99.36
4gz9_A	577	Neuropilin-1, A5 protein; multi-domain, cell-CELL	99.35
3dem_A	278	Complement factor MAsp-3; complement system, innat	99.35
1nt0_A	286	MAsp2, mannose-binding protein associated serine p	99.32
3kq4_B	457	Cubilin; protein-protein complex, cobalt, cobalt t	99.26
2qqk_A	579	Neuropilin-2; VEGF receptor, semaphorin receptor,	99.22
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.95
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	98.84
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.84
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.83
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.81
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.8
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	98.77
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.76
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	98.75
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.69
2wph_E	59	Coagulation factor IXA light chain; serine proteas	98.6
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	98.59
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.57
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.57
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.57
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	98.56
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.53
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	98.51
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.49
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.46
2vh0_B	134	Activated factor XA light chain; serine protease,	98.46
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.46
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.45
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	98.43
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.41
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.4
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.36
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.33
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.32
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.32
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	98.31
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.27
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.18
1szb_A	170	Mannose binding lectin-associated serine protease-	98.15
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	98.14
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	98.14
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	97.99
1aut_L	114	Activated protein C; serine proteinase, plasma cal	97.93
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.93
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	97.92
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.85
1nzi_A	159	Complement C1S component; calcium, innate immunity	97.84
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	97.8
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	97.79
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	97.77
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	97.76
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.75
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.7
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	97.68
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	97.59
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	97.56
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	97.55
2vh0_B	134	Activated factor XA light chain; serine protease,	97.55
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	97.55
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.38
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.35
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.34
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	97.33
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.25
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.18
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.18
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	97.16
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	97.07
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	97.06
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	96.9
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	96.87
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	96.55
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	96.47
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	96.28
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	95.94
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	95.89
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	95.86
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	95.83
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	95.62
2wph_E	59	Coagulation factor IXA light chain; serine proteas	95.45
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	95.22
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	94.4
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	93.54
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	93.45
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	92.63
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	92.08
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	91.89
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	90.64
1ob1_C	99	Major merozoite surface protein; immune system, im	88.04
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	87.95
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	87.68
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	81.8

>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1

Probab=99.84  E-value=2.6e-20  Score=146.21  Aligned_cols=121  Identities=30%  Similarity=0.620  Sum_probs=103.9

Q ss_pred             ccccccccc---cCcccccccCCCceEEEecCCeeeeccccccccCCccee-ecCCCCcccCCCCCCCCCCCCceEEEEE
Q psy2974          37 DKDECMTNN---GGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYE-ITAPNGVIKTPNHPDYYPSKRECIWHFT  112 (186)
Q Consensus        37 d~~eC~~~~---~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~~~C~~~-~~~~~G~i~sp~~p~~y~~~~~C~w~i~  112 (186)
                      +.++|...+   ..|.+.|.|..|+|.|.|.+||.+..+...|. ..|++. ++...|.|.||+||+.|+++..|.|.|.
T Consensus       119 ~~~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~~d~~~C~-~~Cg~~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~  197 (286)
T 1nt0_A          119 DVDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHTCS-ALCSGQVFTGRSGFLSSPEYPQPYPKLSSCAYNIR  197 (286)
T ss_dssp             ECCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEE-ECCEEEEECSSSEEEECTTTTSCCCSSCEEEEEEE
T ss_pred             cCCccCCCCCCcccCCCccccccCceEeecCCCceeccCCCCcc-ccccCceecCCceEEeCCCCCCCCCCCCEEEEEEE
Confidence            456676432   25899999999999999999999999999996 579887 7888999999999999999999999999


Q ss_pred             cCCCCEEEeccC-------------------------------------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEE
Q psy2974         113 TTPGHRIKLNPT-------------------------------------DIISISEGLLVRFRSDDTVVGKGFSASYIAI  155 (186)
Q Consensus       113 ~~~g~~i~l~~~-------------------------------------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~  155 (186)
                      +++|++|.|.|.                                     .++|.++.|+|.|+||.++.++||+|.|++.
T Consensus       198 ~~~g~~I~l~f~~~f~le~~~~~~C~~D~l~i~dg~~~~~~~CG~~~p~~~~S~~n~l~i~F~sd~~~~~~GF~~~y~~~  277 (286)
T 1nt0_A          198 LEEGFSITLDFVESFDVEMHPEAQCPYDSLKIQTDKREYGPFCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTST  277 (286)
T ss_dssp             CCSSCEEEEEECSCCBBCCC----C--CEEEEECSSCEEEEECBSSCCCCEECSSSEEEEEEECCSCCCCCBCEEEEEEE
T ss_pred             CCCceEEEEEEeceEEeccCCCCCCCCcEEEEEeCCcceEEEcCCCCCCCEEeeCCEEEEEEEeCCCCCCCCEEEEEEEe
Confidence            999999999873                                     1567889999999999999999999999987


Q ss_pred             eCC
Q psy2974         156 DTQ  158 (186)
Q Consensus       156 ~~~  158 (186)
                      ..+
T Consensus       278 ~~~  280 (286)
T 1nt0_A          278 AQP  280 (286)
T ss_dssp             C--
T ss_pred             cCc
Confidence            655

>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}

Probab=99.82  E-value=4.2e-20  Score=144.31  Aligned_cols=117  Identities=36%  Similarity=0.739  Sum_probs=102.0

Q ss_pred             ccccccccc---cCcccccccCCCceEEEecCCeeeeccccccccCCccee-ecCCCCcccCCCCCCCCCCCCceEEEEE
Q psy2974          37 DKDECMTNN---GGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYE-ITAPNGVIKTPNHPDYYPSKRECIWHFT  112 (186)
Q Consensus        37 d~~eC~~~~---~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~~~C~~~-~~~~~G~i~sp~~p~~y~~~~~C~w~i~  112 (186)
                      +.++|....   ..|.+.|.+..+++.|.|.+||.+..+...|. ..|++. ++...|.|.||+||+.|+++..|.|.|.
T Consensus       120 ~~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~-~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~i~  198 (278)
T 3dem_A          120 DVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCR-VECSDNLFTQRTGVITSPDFPNPYPKSSECLYTIE  198 (278)
T ss_dssp             ECCTTTC-----CCCSSEEEEETTEEEEECCTTCEECTTSSCEE-CCCCCCCBCSSEEEEESTTTTSCCCSSCEEEEEEE
T ss_pred             ccccCCCCCCCcccCCcCcCCccCCcEEEeCCcceeccCCCCCc-ccCCCceecCCccceeCCCCCCCCCCcCeEEEEEE
Confidence            556676432   37889999999999999999999999999997 578865 5778899999999999999999999999


Q ss_pred             cCCCCEEEeccCc-------------------------------------eeeeCCeEEEEEEeCCCCCCCCcEEEEEE
Q psy2974         113 TTPGHRIKLNPTD-------------------------------------IISISEGLLVRFRSDDTVVGKGFSASYIA  154 (186)
Q Consensus       113 ~~~g~~i~l~~~~-------------------------------------~~s~~~~l~i~f~sd~~~~~~GF~~~y~~  154 (186)
                      ++++++|.|.|.+                                     ++|.++.|+|.|+||.+...+||+|+|++
T Consensus       199 ~~~g~~i~l~f~~~f~le~~~~~~C~~D~l~i~dg~~~~~~~CG~~~p~~~~s~~~~l~v~F~sd~~~~~~GF~~~y~~  277 (278)
T 3dem_A          199 LEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPKVLGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGWRLSYRA  277 (278)
T ss_dssp             CCTTCCEEEEECSCCBBCCCSSSSSSSCEEEEEETTEEEEEECBSSCCCCEECSCSEEEEEEECCSSCCCCBCEEEEEE
T ss_pred             eCCCcEEEEEEccccccccCCCCCCCCCEEEEecCCcccccccCCCCCCCEEEcCCEEEEEEEECCCCCcCCEEEEEEE
Confidence            9999999987642                                     46778999999999999999999999986

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}

Probab=99.77  E-value=3e-18  Score=138.45  Aligned_cols=121  Identities=33%  Similarity=0.663  Sum_probs=106.6

Q ss_pred             ccccccc---cccCcccccccCCCceEEEecCCeeeeccccccccCCcceeecCCCCcccCCCCCCCCCCCCceEEEEEc
Q psy2974          37 DKDECMT---NNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTT  113 (186)
Q Consensus        37 d~~eC~~---~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~  113 (186)
                      +.++|..   ....|.+.|.+..+++.|.|..||.+..+...|....|+..++...|.|.||+||..|+++..|.|.|.+
T Consensus       120 ~~~~c~~~~~~~~~~~~~c~n~~g~~~csC~~g~~l~~~~~~~~~~~c~~~~~~~~G~i~SP~yP~~Yp~~~~C~w~i~~  199 (361)
T 4aqb_A          120 DVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDFPNPYPKSSECLYTIEL  199 (361)
T ss_dssp             ECCGGGTGGGSSSCCSSEEEEETTEEEEECCTTCEECTTSSCEECCCCCCCBCSSEEEEESTTTTSCCCSSCEEEEEEEC
T ss_pred             cccccccccccCCCCCccCCccCCCceeccCCCeEEeccccccccccccceEeCCCcEEecCCCCCCCCCCceeeEEeee
Confidence            3455543   2346889999999999999999999999988888777888889999999999999999999999999999


Q ss_pred             CCCCEEEeccC-------------------------------------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEe
Q psy2974         114 TPGHRIKLNPT-------------------------------------DIISISEGLLVRFRSDDTVVGKGFSASYIAID  156 (186)
Q Consensus       114 ~~g~~i~l~~~-------------------------------------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~  156 (186)
                      ++|++|.|.|.                                     .+.|.++.|+|+|+||.+..++||+|+|+++.
T Consensus       200 ~~g~~i~l~f~~~~~~e~~~~~~C~~D~l~i~dg~~~~~~~cG~~~p~~~~s~~n~~~i~F~SD~~~~~~GF~~~y~~~~  279 (361)
T 4aqb_A          200 EEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPKVLGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGWRLSYRAAG  279 (361)
T ss_dssp             CTTCEEEEEECSCCBBCCCSSSSSSSSEEEEEETTEEEEEECBSSCCCCEECSCSEEEEEEECCSCCCCCBCEEEEEEEC
T ss_pred             ccCcEEEEEEeecccccCCccCccCCCeEEEeeCCeeEEeeCCCCCCCCEeecCCeEEEEEEeCCCCCccceEEEEEEcc
Confidence            99999999853                                     25778899999999999999999999999875


Q ss_pred             C
Q psy2974         157 T  157 (186)
Q Consensus       157 ~  157 (186)
                      .
T Consensus       280 ~  280 (361)
T 4aqb_A          280 N  280 (361)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens}

Probab=99.66  E-value=4.9e-16  Score=110.62  Aligned_cols=81  Identities=33%  Similarity=0.640  Sum_probs=72.7

Q ss_pred             CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC----------------------------------
Q psy2974          79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT----------------------------------  124 (186)
Q Consensus        79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~----------------------------------  124 (186)
                      ..|++.++...|.|.||+||+.|+++..|.|.|.++++++|+|.|.                                  
T Consensus         5 ~~Cgg~l~~~~G~i~SP~yP~~Yp~n~~C~W~I~~~~g~~I~L~F~~f~le~~~~C~~D~l~I~dg~~~~~~~~~~~CG~   84 (149)
T 2wno_A            5 KECGGVFTDPKQIFKSPGFPNEYEDNQICYWHIRLKYGQRIHLSFLDFDLEDDPGCLADYVEIYDSYDDVHGFVGRYCGD   84 (149)
T ss_dssp             SCCCEEECSSEEEEECTTTTSCCCTTCEEEEEEECCTTCEEEEEEEEEECCCCTTCCSSEEEEESSSSSSSSEEEEECSS
T ss_pred             CCCCCEEECCceEEECCCCCcCCCCCCEEEEEEEECCCCEEEEEEEEEEecCCCCCCCCEEEEecCCCCCcceeeeEcCC
Confidence            4689999988999999999999999999999999999999999853                                  


Q ss_pred             ----ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeCCC
Q psy2974         125 ----DIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQG  159 (186)
Q Consensus       125 ----~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~~~  159 (186)
                          .++|.++.|+|.|+||.+...+||+|.|+++....
T Consensus        85 ~~p~~~~S~~n~l~v~F~Sd~~~~~~GF~a~y~~~~~~~  123 (149)
T 2wno_A           85 ELPDDIISTGNVMTLKFLSDASVTAGGFQIKYVAMDPVS  123 (149)
T ss_dssp             SCCCCEECSSSEEEEEEECCSSCCCCEEEEEEEEECC--
T ss_pred             CCCCCEEEeCCEEEEEEEECCCCCCCCEEEEEEEECCCc
Confidence                26788999999999999999999999999987663

>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A

Probab=99.64  E-value=5.8e-16  Score=105.43  Aligned_cols=75  Identities=31%  Similarity=0.578  Sum_probs=67.3

Q ss_pred             Ccceee-cCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccCc---------------------------------
Q psy2974          80 GCKYEI-TAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTD---------------------------------  125 (186)
Q Consensus        80 ~C~~~~-~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~~---------------------------------  125 (186)
                      .|++.+ +...|.|.||+||..|+++..|.|.|.++++++|+|.|.+                                 
T Consensus         3 ~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~i~l~f~d~f~le~~~~~~C~~D~l~i~dg~~~~~~~CG~~   82 (115)
T 3poj_A            3 ECSGNLFTQRTGTITSPDYPNPYPKSSECSYTIDLEEGFMVTLQFEDIFDIEDHPEVPCPYDYIKIKAGSKVWGPFCGEK   82 (115)
T ss_dssp             CEEEEEECSSEEEEECTTTTSCCCTTCEEEEEEECCTTCCCEEEECSCCBBCCCSSSSSCSCEEEEEETTEEEEEECBSS
T ss_pred             ECCCceEcCCCEEEcCCCCCcCCcCCCeEEEEEEcCCCCEEEEEEecceecccCCCCCCCCeEEEEEcCCcccccCcCCC
Confidence            587774 7788999999999999999999999999999999888651                                 


Q ss_pred             ----eeeeCCeEEEEEEeCCCCCCCCcEEEEEE
Q psy2974         126 ----IISISEGLLVRFRSDDTVVGKGFSASYIA  154 (186)
Q Consensus       126 ----~~s~~~~l~i~f~sd~~~~~~GF~~~y~~  154 (186)
                          ++|.++.|+|.|+||.+..++||+|+|++
T Consensus        83 ~p~~~~s~~~~l~i~F~Sd~~~~~~GF~~~y~a  115 (115)
T 3poj_A           83 SPEPISTQSHSIQILFRSDNSGENRGWRLSYRA  115 (115)
T ss_dssp             CCCCEECCCSEEEEEEECCSSCCCCBCEEEEEC
T ss_pred             CCCCEEecCCEEEEEEEcCCCCCCCCEEEEEEC
Confidence                46778999999999999999999999974

>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1

Probab=99.51  E-value=7e-14  Score=94.26  Aligned_cols=73  Identities=19%  Similarity=0.360  Sum_probs=65.0

Q ss_pred             CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC--------------------------------ce
Q psy2974          79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT--------------------------------DI  126 (186)
Q Consensus        79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~--------------------------------~~  126 (186)
                      ..|++.++...|.|.||     |+++..|.|.|.+++|++|.|.|.                                .+
T Consensus         4 ~~Cgg~l~~~~G~i~SP-----Yp~~~~C~w~I~~~~g~~I~l~f~~f~l~C~~D~l~I~dg~~~~~~~~~~CG~~p~~~   78 (109)
T 1spp_A            4 HACGGRLTDDYGTIFTY-----KGPKTECVWTLQVDPKYKLLVSIPTLNLTCGKEYVEVLEGAPGSKSLGKFCEGLSILN   78 (109)
T ss_dssp             CSSCEEEECSEEEEECC-----CSSCSEEEEEEECCTTSEEEEEEEEEECCTTTEEEEEESSSTTSCEEEEESEEEEEEE
T ss_pred             cCCCCEEeCCcEEEeCC-----CCCCCcEEEEEEcCCCCEEEEEEeeeeccCCCCEEEEEeCCCCCchhhhhhCCCCCCE
Confidence            46999999889999997     788999999999999999999854                                24


Q ss_pred             eeeCCeEEEEEEeCCCCCCCCcEEEEEEEeC
Q psy2974         127 ISISEGLLVRFRSDDTVVGKGFSASYIAIDT  157 (186)
Q Consensus       127 ~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~  157 (186)
                      +| ++.|+|.|+||.+...+||+|.|++.+.
T Consensus        79 ~S-~n~l~v~F~Sd~~~~~~GF~~~y~~~~~  108 (109)
T 1spp_A           79 RG-SSGMTVKYKRDSGHPASPYEIIFLRDSQ  108 (109)
T ss_dssp             EE-CTTCEEEEEECTTCCCCCCEEEEEEECC
T ss_pred             EE-CCEEEEEEEeCCCCCCCCEEEEEEEeCC
Confidence            67 9999999999999999999999998754

>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1

Probab=99.49  E-value=1.2e-13  Score=94.14  Aligned_cols=75  Identities=13%  Similarity=0.321  Sum_probs=66.4

Q ss_pred             CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC--------------------------------ce
Q psy2974          79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT--------------------------------DI  126 (186)
Q Consensus        79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~--------------------------------~~  126 (186)
                      ..|++.++...|.|.||     |+++..|.|.|.+++|++|.|.|.                                .+
T Consensus         7 ~~Cgg~l~~~~G~i~SP-----Yp~~~~C~w~I~~~~g~~I~l~f~~f~l~C~~D~l~i~dg~~~~~~~~~~CG~~p~~~   81 (116)
T 1spp_B            7 DECGRVIKDTSGSISNT-----DRQKNLCTWTILMKPDQKVRMAIPYLNLACGKEYVEVFDGLLSGPSYGKLCAGAAIVF   81 (116)
T ss_dssp             GGTTEEECCSEEEEECC-----SSCCSEEEEEEECCTTCEEEEEEEEEECCBTTEEEEEESSSTTSCEEEEESEEEEEEE
T ss_pred             CCCCCEEeCCceEEeCC-----CcCCCCEEEEEEeCCCCEEEEEEeeCcccCCCCEEEEEcCCCCCcccccccCcCCCCE
Confidence            45899998888999998     778999999999999999999853                                25


Q ss_pred             eeeCCeEEEEEEeCCCCCCCCcEEEEEEEeCC
Q psy2974         127 ISISEGLLVRFRSDDTVVGKGFSASYIAIDTQ  158 (186)
Q Consensus       127 ~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~~  158 (186)
                      +|.++.|+|.|+||.+..++||+|.|++++..
T Consensus        82 ~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~~~  113 (116)
T 1spp_B           82 LSTANTMTIKYNRISGNSSSPFLIYFYGSSPG  113 (116)
T ss_dssp             ECSSSEEEEEEEESSCSCCCCCEEEEEEECC-
T ss_pred             EecCCEEEEEEEECCCCCCCCEEEEEEEeCCC
Confidence            67899999999999999999999999998754

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=99.49  E-value=7.5e-14  Score=100.09  Aligned_cols=73  Identities=34%  Similarity=0.465  Sum_probs=64.7

Q ss_pred             cCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC-----------------------------------------
Q psy2974          86 TAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT-----------------------------------------  124 (186)
Q Consensus        86 ~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~-----------------------------------------  124 (186)
                      +...|.|.||+||+.|+++..|.|.|.++++++|.|.|.                                         
T Consensus         2 ~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~C~~D~l~i~dg~~~~~~~CG~~~~~~~~~P~~   81 (159)
T 1nzi_A            2 PTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCGQRSSNNPHSPIV   81 (159)
T ss_dssp             CCSEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCGGGCSSEEEEEC---CCEEECSEECCCCSSCCCS
T ss_pred             CCCCEEEECCCCccCCCCCCCEEEEEEeCCCCEEEEEEeEEEecCCCCCCCCEEEEEeCCchhcccCCCCCCCcccCCcc
Confidence            456799999999999999999999999999999998742                                         


Q ss_pred             -ceeeeCCeEEEEEEeCCCCCC--CCcEEEEEEEeCC
Q psy2974         125 -DIISISEGLLVRFRSDDTVVG--KGFSASYIAIDTQ  158 (186)
Q Consensus       125 -~~~s~~~~l~i~f~sd~~~~~--~GF~~~y~~~~~~  158 (186)
                       .++|.++.|+|.|+||.+...  +||+|.|.+++.+
T Consensus        82 ~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~d~~  118 (159)
T 1nzi_A           82 EEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDIN  118 (159)
T ss_dssp             EEEEESSSEEEEEEEECSCCTTCCCEEEEEEEEEECC
T ss_pred             eeEEecCCeEEEEEEecCccCcccccceeeeecccCc
Confidence             256889999999999999876  9999999998764

>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1

Probab=99.47  E-value=2.9e-13  Score=91.90  Aligned_cols=75  Identities=19%  Similarity=0.356  Sum_probs=66.3

Q ss_pred             cCCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC--------------------------------c
Q psy2974          78 EGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT--------------------------------D  125 (186)
Q Consensus        78 ~~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~--------------------------------~  125 (186)
                      +..|++.++...|.|.||     |+++..|.|.|.+++|++|.|.|.                                .
T Consensus         7 ~~~Cgg~l~~~~G~i~Sp-----y~~~~~C~w~I~~~~g~~I~l~f~~f~l~C~~D~l~i~dg~~~~~~~~~~CG~~p~~   81 (114)
T 1sfp_A            7 NTNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQLNCNKESLEIIDGLPGSPVLGKICEGSLMD   81 (114)
T ss_dssp             ECSSCEEECCSEEEEECC-----CSSCSEEEEEEECCTTCEEEEEEEEEECCTTTEEEEEESSSTTSCEEEEESEEEEEE
T ss_pred             CCCCCCeEECCcEEEeCC-----CcCCCCEEEEEEeCCCCEEEEEEeeeeeecCCCEEEEEcCCCCCcceeEecCcCCCC
Confidence            356999999889999997     778999999999999999999853                                2


Q ss_pred             eeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeC
Q psy2974         126 IISISEGLLVRFRSDDTVVGKGFSASYIAIDT  157 (186)
Q Consensus       126 ~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~  157 (186)
                      ++|.++.|+|.|+||.+...+||+|.|++.+.
T Consensus        82 ~~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~p~  113 (114)
T 1sfp_A           82 YRSSGSIMTVKYIREPEHPASFYEVLYFQDPQ  113 (114)
T ss_dssp             EECSSSEEEEEEEECTTSCCCCCEEEEEEESC
T ss_pred             EEecCCeEEEEEEECCCCCCCCEEEEEEEEcC
Confidence            56789999999999999999999999998754

>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H

Probab=99.45  E-value=1.6e-13  Score=117.08  Aligned_cols=87  Identities=33%  Similarity=0.529  Sum_probs=78.4

Q ss_pred             CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC----------------------------------
Q psy2974          79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT----------------------------------  124 (186)
Q Consensus        79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~----------------------------------  124 (186)
                      ..|+..++...|.|.||+||..|+++..|.|.|.+++|++|.|.|.                                  
T Consensus       127 ~~C~~~~~~~~G~i~SPnyP~~Yp~n~~C~W~I~~p~g~~I~L~F~~F~lE~~~~~~~~~~C~~D~l~I~dG~~~~~~~l  206 (577)
T 4gz9_A          127 PECSQNYTAPTGVIKSPGFPEKYPNSLECTYIIFAPKMSEIILEFESFDLEQDSNPPGGMFCRYDRLEIWDGFPEVGPHI  206 (577)
T ss_dssp             CEEEEEECSSEEEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCCCSCSTTCCCCSSEEEEESSSTTTSCEE
T ss_pred             cccceeecCCCccccCCCCCCCCCCCceEEEEEEECCCCEEEEEEEEEEeeecCCCCCCCccCccEEEEEcCCCCCCcee
Confidence            3588889999999999999999999999999999999999988742                                  


Q ss_pred             ----------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeCCCCceeee
Q psy2974         125 ----------DIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSKEFSE  165 (186)
Q Consensus       125 ----------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~~~~~~~~~  165 (186)
                                .++|.++.|+|+|+||.++.++||+|.|++++...+..+.|
T Consensus       207 g~~CG~~~P~~i~S~~n~l~i~F~SD~s~~~~GF~a~y~~v~~~~s~~~~c  257 (577)
T 4gz9_A          207 GRYCGQKTPGRIRSSSGVLSMVFYTDSAIAKEGFSANYSVLQSSISEDFKC  257 (577)
T ss_dssp             EEECSSSCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEECCCCCCTTCCS
T ss_pred             EEEeCCCCCCCcceeCCEEEEEEEECCCCCCceEEEEEEEEcccccccccc
Confidence                      36788999999999999999999999999999887766666

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=99.44  E-value=3.8e-13  Score=97.54  Aligned_cols=75  Identities=32%  Similarity=0.485  Sum_probs=66.1

Q ss_pred             eecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC---------------------------------------
Q psy2974          84 EITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT---------------------------------------  124 (186)
Q Consensus        84 ~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~---------------------------------------  124 (186)
                      .++...|.|.||+||..|+++..|.|.|.++++++|.|.|.                                       
T Consensus         7 ~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~C~~D~l~i~dg~~~~~~~CG~~~~~~~~~P   86 (170)
T 1szb_A            7 WPEPVFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSGAKVLATLCGQESTDTERAP   86 (170)
T ss_dssp             CCCCCEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEECCCCTTSCSSEEEEESSSSEEEEECSBTTTTCSSSC
T ss_pred             eEcCCCeEEECCCCCcCCcCCCcEEEEEEcCCCCEEEEEEEEEEccCCCCCCCCEEEEEeCCccccccCCCCCCccccCC
Confidence            46678899999999999999999999999999999988742                                       


Q ss_pred             ---ceeeeCCeEEEEEEeCCCCCC--CCcEEEEEEEeCC
Q psy2974         125 ---DIISISEGLLVRFRSDDTVVG--KGFSASYIAIDTQ  158 (186)
Q Consensus       125 ---~~~s~~~~l~i~f~sd~~~~~--~GF~~~y~~~~~~  158 (186)
                         .++|.++.|+|.|+||.+...  .||.+.|.+++.+
T Consensus        87 ~~~~~~S~~n~l~v~F~Sd~~~~~~~~Gf~~~~~~~di~  125 (170)
T 1szb_A           87 GKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAAEDID  125 (170)
T ss_dssp             TTCCEECSSSEEEEEEECCSCCSSCCCEEEEEEEEEECC
T ss_pred             CCceEEeeCCeEEEEEeccccccCcCcCceeeeeccccC
Confidence               356778999999999999886  9999999987654

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}

Probab=99.44  E-value=2e-13  Score=110.07  Aligned_cols=75  Identities=37%  Similarity=0.613  Sum_probs=66.8

Q ss_pred             eecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC---------------------------------------
Q psy2974          84 EITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT---------------------------------------  124 (186)
Q Consensus        84 ~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~---------------------------------------  124 (186)
                      .++...|.|+||+||+.|+++..|.|.|.+++|++|+|.|.                                       
T Consensus         4 ~lt~~~G~i~SP~yP~~Yp~n~~C~W~I~~~~g~~I~l~F~~f~lE~~~~C~~D~l~i~dg~~~~~~~cG~~~~~~~~~~   83 (361)
T 4aqb_A            4 ELNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVETEDQVLATFCGRETTDTEQTP   83 (361)
T ss_dssp             EEESSEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCGGGCSSEEEEECSSCEEEEECSBSSSSSSCCC
T ss_pred             EEeCCeEEEeCCCCCCCCCCCCeEEEEEEECCCCEEEEEEeEEEecCCCCCCceEEEEccCCcccceeeccccCCCccCC
Confidence            46778899999999999999999999999999999999853                                       


Q ss_pred             ---ceeeeCCeEEEEEEeCCCCCCC--CcEEEEEEEeCC
Q psy2974         125 ---DIISISEGLLVRFRSDDTVVGK--GFSASYIAIDTQ  158 (186)
Q Consensus       125 ---~~~s~~~~l~i~f~sd~~~~~~--GF~~~y~~~~~~  158 (186)
                         .++|.++.|+|.|+||.++.++  ||+|+|+++...
T Consensus        84 ~~~~~~S~~n~l~v~F~SD~s~~~~~~GF~a~y~~~~~~  122 (361)
T 4aqb_A           84 GQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVD  122 (361)
T ss_dssp             TTCCEECSSSEEEEEEEECSCCCSCCCEEEEEEEEEECC
T ss_pred             CccceeccCCEeEEEEEeCCcccccccccccceeecccc
Confidence               1578899999999999998774  999999998765

>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1

Probab=99.43  E-value=2.8e-13  Score=112.33  Aligned_cols=87  Identities=32%  Similarity=0.521  Sum_probs=74.7

Q ss_pred             CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC----------------------------------
Q psy2974          79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT----------------------------------  124 (186)
Q Consensus        79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~----------------------------------  124 (186)
                      ..|++.++...|.|.||+||+.|+++..|.|.|.++++++|.|.|.                                  
T Consensus         9 ~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~~~~   88 (450)
T 2qqm_A            9 PECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHI   88 (450)
T ss_dssp             CTTCEEECSSEEEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCC----CCCSSCSSEEEEESSSTTTSCEE
T ss_pred             CCCCCeEeCCcEEEeCCCCCcCCCCCCeEEEEEEeCCCCEEEEEEEEEEeEeccCCCCCCCCCCcEEEEecCCCCCCccc
Confidence            4699999888999999999999999999999999999999988742                                  


Q ss_pred             ----------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeCCCCceeee
Q psy2974         125 ----------DIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSKEFSE  165 (186)
Q Consensus       125 ----------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~~~~~~~~~  165 (186)
                                .++|.++.|+|.|+||.+...+||+|.|+++.......+.|
T Consensus        89 ~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~~~~~~~~~C  139 (450)
T 2qqm_A           89 GRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKC  139 (450)
T ss_dssp             EEECTTCCCCEEEECSSEEEEEEECCSSCCCCEEEEEEEECCCCCC--CCS
T ss_pred             eeecCCcCCCcEEEcCCEEEEEEEeCCccccCCeEEEEecccccccCCCcc
Confidence                      25788999999999999999999999999987554444444

>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}

Probab=99.42  E-value=5.7e-13  Score=110.81  Aligned_cols=87  Identities=29%  Similarity=0.547  Sum_probs=71.9

Q ss_pred             CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC----------------------------------
Q psy2974          79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT----------------------------------  124 (186)
Q Consensus        79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~----------------------------------  124 (186)
                      ..|++.++...|.|.||+||+.|+++..|.|.|.+++|++|.|.|.                                  
T Consensus         6 ~~Cg~~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~L~F~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~~~~   85 (460)
T 2qqo_A            6 EDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHVGPLI   85 (460)
T ss_dssp             -CCCEEECSSEEEEECTTTTSCCCSSCEEEEEEECCTTCEEEEEEEEEECCCC--------CCSSEEEEESSSTTTSCEE
T ss_pred             CCCCCEEeCCceEEeCCCCCCCCCCCCEEEEEEEcCCCCEEEEEEEEEEcccccccccCCCCCCCEEEEEcCCCCCCccc
Confidence            3589999888999999999999999999999999999999988742                                  


Q ss_pred             ----------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeCCCCceeee
Q psy2974         125 ----------DIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSKEFSE  165 (186)
Q Consensus       125 ----------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~~~~~~~~~  165 (186)
                                .++|.++.|+|.|+||.+...+||+|.|++++...+..+.|
T Consensus        86 ~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~~~~~~~~~C  136 (460)
T 2qqo_A           86 GKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARYYLVHQEPLENFQC  136 (460)
T ss_dssp             EEECTTCCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEEECC-------C
T ss_pred             ceEeCCcCCcCEEeeCCEEEEEEeccceeecCcEEEEEEEEecccccceec
Confidence                      25788999999999999999999999999987644333434

>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}

Probab=99.38  E-value=8.8e-13  Score=109.50  Aligned_cols=78  Identities=32%  Similarity=0.647  Sum_probs=71.5

Q ss_pred             cceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC------------------------------------
Q psy2974          81 CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT------------------------------------  124 (186)
Q Consensus        81 C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~------------------------------------  124 (186)
                      |++.++...|.|.||+||+.|+++..|.|.|.+++|++|+|.|.                                    
T Consensus         1 CGg~l~~~~G~i~SP~yP~~Y~~~~~C~w~I~~~~g~~i~L~f~~f~le~~~~C~~D~l~i~d~~~~~~l~~~CG~~~p~   80 (457)
T 3kq4_B            1 CGEILTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHLMFETFHLEFHYNCTNDYLEVYDTDSETSLGRYCGKSIPP   80 (457)
T ss_dssp             CCCEECSSEEECCCSSTTSCCCSSCCCEEEEECCSSEEEEECCSCCCCCCCSSCCSSEEEEECTTSSSEEEEECSSCCCS
T ss_pred             CCCeEecCCEEEeCCCCCCCCCCCCcEEEEEEcCCCCEEEEEEEeeecccCCCCCccEEEEEcCCCCcccceeCCCCCCC
Confidence            78888889999999999999999999999999999999999853                                    


Q ss_pred             ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeCC
Q psy2974         125 DIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQ  158 (186)
Q Consensus       125 ~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~~  158 (186)
                      .++|.++.|+|.|+||.+...+||+|.|.+++..
T Consensus        81 ~~~S~~n~l~v~F~sd~~~~~~GF~~~y~~~~~~  114 (457)
T 3kq4_B           81 SLTSSGNSLMLVFVTDSDLAYEGFLINYEAISAA  114 (457)
T ss_dssp             CEECSSSEEEEEEECCSSCCCSCCCCEEEEEESS
T ss_pred             cEEEeCCEEEEEEEecCccccCceeEeeeccccc
Confidence            2678899999999999999999999999998653

>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A

Probab=99.36  E-value=3.1e-12  Score=109.12  Aligned_cols=87  Identities=29%  Similarity=0.547  Sum_probs=75.8

Q ss_pred             CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC----------------------------------
Q psy2974          79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT----------------------------------  124 (186)
Q Consensus        79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~----------------------------------  124 (186)
                      ..|++.++...|.|.||+||..|+++..|.|.|.++++++|.|.|.                                  
T Consensus       125 ~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~F~~f~le~~~~~~~~~~C~~D~l~I~dg~~~~~~~~  204 (579)
T 2qqk_A          125 EDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHVGPLI  204 (579)
T ss_dssp             CCCCCEECCSEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEEC-------------CCEEEEESSSTTTSCEE
T ss_pred             ccccceeccCCceecCCCCcccCCCCCeEEEEEEcCCCCEEEEEEEEEEeecccccccCCCCCCEEEEEEeCCCCCCcee
Confidence            3599999989999999999999999999999999999999987642                                  


Q ss_pred             ----------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeCCCCceeee
Q psy2974         125 ----------DIISISEGLLVRFRSDDTVVGKGFSASYIAIDTQGSKEFSE  165 (186)
Q Consensus       125 ----------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~~~~~~~~~  165 (186)
                                .++|.++.|+|.|+||.++..+||+|.|+++....+..+.|
T Consensus       205 ~~~CG~~~p~~i~S~~n~l~i~F~sd~~~~~~GF~~~y~~~~~~~~~~~~C  255 (579)
T 2qqk_A          205 GKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARYYLVHQEPLENFQC  255 (579)
T ss_dssp             EEECSSSCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEEEECCCCSSCCS
T ss_pred             EEeCCCCCCCcEEeeCCeEEEEEeccccccccceEEEEEEEecccccCCeE
Confidence                      25788999999999999999999999999987765544545

>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H

Probab=99.35  E-value=2.6e-12  Score=109.59  Aligned_cols=79  Identities=27%  Similarity=0.492  Sum_probs=68.4

Q ss_pred             CCcceeecCC-CCcccCCCCCCCCCCCCceEEEEEcCCC-CEEEeccC--------------------------------
Q psy2974          79 GGCKYEITAP-NGVIKTPNHPDYYPSKRECIWHFTTTPG-HRIKLNPT--------------------------------  124 (186)
Q Consensus        79 ~~C~~~~~~~-~G~i~sp~~p~~y~~~~~C~w~i~~~~g-~~i~l~~~--------------------------------  124 (186)
                      ..||+.++.. .|.|+||+||..|+++..|.|.|.++.+ .+|.|.|.                                
T Consensus         7 ~~CGg~l~~~~~G~i~SPnyP~~Yp~n~~C~W~I~~p~~~~~I~L~F~~~f~le~~~C~~Dyl~I~dG~~~~~~~lg~~C   86 (577)
T 4gz9_A            7 DKCGGTIKIENPGYLTSPGYPHSYHPSEKCEWLIQAPEPYQRIMINFNPHFDLEDRDCKYDYVEVIDGENEGGRLWGKFC   86 (577)
T ss_dssp             CCSSEEEECSSCEEEECTTTTTCCCSSCEEEEEEECSSTTCCEEEEECSCCBCCCGGGTSSEEEEEESSSTTSEEEEEEC
T ss_pred             CCCCCEEEcCCCEEEeCCCCCCCCCCCCeEEEEEEECCCCcEEEEEEEeeeeecCCCCCccEEEEEeCCCCCCcEEEEec
Confidence            3699988754 5999999999999999999999999865 67888753                                


Q ss_pred             ------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEeC
Q psy2974         125 ------DIISISEGLLVRFRSDDTVVGKGFSASYIAIDT  157 (186)
Q Consensus       125 ------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~  157 (186)
                            .++|.++.|+|+|+||.++.++||+|.|+++..
T Consensus        87 G~~~p~~i~S~~n~l~v~F~SD~s~~~~GF~a~y~~~~~  125 (577)
T 4gz9_A           87 GKIAPSPVVSSGPFLFIKFVSDYETHGAGFSIRYEIFKR  125 (577)
T ss_dssp             SSSCCCCEECSSSEEEEEEECCSSCCCCBCEEEEEECCC
T ss_pred             CCCCCCCEEEeCCeEEEEEEECCCCCCCCeEEEEEEeec
Confidence                  267889999999999999999999999998643

>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}

Probab=99.35  E-value=1.9e-12  Score=100.75  Aligned_cols=76  Identities=37%  Similarity=0.589  Sum_probs=64.6

Q ss_pred             eeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC--------------------------------------
Q psy2974          83 YEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT--------------------------------------  124 (186)
Q Consensus        83 ~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~--------------------------------------  124 (186)
                      ..++...|.|.||+||+.|+++..|.|.|.++++++|+|.|.                                      
T Consensus         3 ~~lt~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~L~F~~f~le~~~~C~~D~l~v~dg~~~~~~~CG~~~~~~~~~   82 (278)
T 3dem_A            3 VELNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVETEDQVLATFCGRETTDTEQT   82 (278)
T ss_dssp             ----CCEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCGGGCSSEEEEECSSCEEEEECSBSSSSSSCC
T ss_pred             ceeccCCceEeCCCCCCCCcCCCcEEEEEEECCCCEEEEEEEEEEeCCCCCCCCcEEEEecCCcccceEcCCcCCCcccC
Confidence            356778899999999999999999999999999999999742                                      


Q ss_pred             ----ceeeeCCeEEEEEEeCCCCCC--CCcEEEEEEEeCC
Q psy2974         125 ----DIISISEGLLVRFRSDDTVVG--KGFSASYIAIDTQ  158 (186)
Q Consensus       125 ----~~~s~~~~l~i~f~sd~~~~~--~GF~~~y~~~~~~  158 (186)
                          .++|.++.|+|.|+||.+...  .||+|.|++++.+
T Consensus        83 ~~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~~~~  122 (278)
T 3dem_A           83 PGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVD  122 (278)
T ss_dssp             CTTCCEECSSSEEEEEEEECSCCCSCCCEEEEEEEEEECC
T ss_pred             CCCccEEecCCeEEEEEecCcccccccceeEEEEEEeccc
Confidence                367889999999999998875  7999999998765

>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1

Probab=99.32  E-value=3.4e-12  Score=99.90  Aligned_cols=75  Identities=31%  Similarity=0.484  Sum_probs=61.8

Q ss_pred             eecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC---------------------------------------
Q psy2974          84 EITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT---------------------------------------  124 (186)
Q Consensus        84 ~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~---------------------------------------  124 (186)
                      .++...|.|.||+||+.|+++..|.|.|.+++|++|+|.|.                                       
T Consensus         3 ~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~p~g~~I~L~F~~f~le~~~~C~~D~l~I~dg~~~~~~~CG~~~~~~~~~P   82 (286)
T 1nt0_A            3 WPEPVFGRLVSPGFPEKYGNHQDRSWTLTAPPGFRLRLYFTHFNLELSYRCEYDFVKLTSGTKVLATLCGQESTDTERAP   82 (286)
T ss_dssp             --CCCEEEEECTTTTSCCCSSCCEEEEEECCTTEEEEEEEEEEECCCCGGGCSSEEEEEETTEEEEEECSSSCCSSCBCC
T ss_pred             cccCCCceEeCCCCCccCcCCCcEEEEEEcCCCCEEEEEEEEEEecCCCCCCCcEEEEECCCeEeceECCCcCCCcccCC
Confidence            45677899999999999999999999999999999998742                                       


Q ss_pred             ---ceeeeCCeEEEEEEeCCCCCC--CCcEEEEEEEeCC
Q psy2974         125 ---DIISISEGLLVRFRSDDTVVG--KGFSASYIAIDTQ  158 (186)
Q Consensus       125 ---~~~s~~~~l~i~f~sd~~~~~--~GF~~~y~~~~~~  158 (186)
                         .++|.++.|+|.|+||.+...  +||+|.|++++.+
T Consensus        83 ~~~~~~S~~n~l~v~F~Sd~s~~~~~~GF~a~y~~~~~~  121 (286)
T 1nt0_A           83 GNDTFYSLGPSLKVTFHSDYSNEKPFTGFEAFYAAEDVD  121 (286)
T ss_dssp             TTCEEECSSSEEEEEEECCC----CCCEEEEEEEEEECC
T ss_pred             CCceEEeCCCEEEEEEEeCCcCCcCcccEEEEEEeccCC
Confidence               246778999999999999876  9999999998654

>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}

Probab=99.26  E-value=1.1e-11  Score=102.88  Aligned_cols=77  Identities=29%  Similarity=0.593  Sum_probs=70.5

Q ss_pred             CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC----------------------------------
Q psy2974          79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT----------------------------------  124 (186)
Q Consensus        79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~----------------------------------  124 (186)
                      ..|++.++...|.|.||+||..|+++..|.|.|.++++++|.|.|.                                  
T Consensus       232 ~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~~~~i~l~f~~f~le~~~~C~~D~l~i~dg~~~~~~~l~~~CG~  311 (457)
T 3kq4_B          232 TGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDYLAVYDGPSSNSHLLTQLCGD  311 (457)
T ss_dssp             CCCEECCCSSEEEEECTTTTSCCCSSCEEEEEECCSTTCCEEEEEEECCCCCCTTCCSSEEEEEESSSTTSEEEEEECSS
T ss_pred             CCCCCeEccCcceeccCCCCCCCCCCCEEEEEEEeCCCCEEEEEEEeeeecCCCCcCCCEEEEEeCCCCCchhhhhhcCC
Confidence            5699999889999999999999999999999999999999999743                                  


Q ss_pred             ----ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEE
Q psy2974         125 ----DIISISEGLLVRFRSDDTVVGKGFSASYIAI  155 (186)
Q Consensus       125 ----~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~  155 (186)
                          .++|+++.|+|+|++|.+...+||+|.|++.
T Consensus       312 ~~p~~i~S~~n~l~v~f~sd~~~~~~GF~a~y~~~  346 (457)
T 3kq4_B          312 EKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQT  346 (457)
T ss_dssp             CCCCCEECSSSCEEEEEECCSSCCCCCCEEEEEEC
T ss_pred             cCCCCEEecCCEEEEEEEeCCcccCCeEEEEEEee
Confidence                2678899999999999999999999999974

>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A

Probab=99.22  E-value=3.7e-11  Score=102.50  Aligned_cols=78  Identities=32%  Similarity=0.557  Sum_probs=65.0

Q ss_pred             CCcceeecC-CCCcccCCCCCCCCCCCCceEEEEEcCC-CCEEEeccC--------------------------------
Q psy2974          79 GGCKYEITA-PNGVIKTPNHPDYYPSKRECIWHFTTTP-GHRIKLNPT--------------------------------  124 (186)
Q Consensus        79 ~~C~~~~~~-~~G~i~sp~~p~~y~~~~~C~w~i~~~~-g~~i~l~~~--------------------------------  124 (186)
                      ..|++.+.. ..|.|.||+||..|+++..|.|.|.++. +++|.|.|.                                
T Consensus         4 ~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~p~~~~~I~l~F~~~f~le~~~C~~D~l~i~dg~~~~~~~l~~~C   83 (579)
T 2qqk_A            4 PPCGGRLNSKDAGYITSPGYPQDYPSHQNCEWIVYAPEPNQKIVLNFNPHFEIEKHDCKYDFIEIRDGDSESADLLGKHC   83 (579)
T ss_dssp             -CCCEEEETTSCEEEECTTTTSCCCSSCCEEEEEECSSTTSEEEEEECSCCBCCCTTSSSSEEEEEESSSTTSEEEEEEC
T ss_pred             CCCCCEEEeCCCeEEeCCCCCCCCcCCCEEEEEEEECCCCcEEEEEEecccccccCCCCeeEEEEEeCCCCCcceeeeEC
Confidence            468988875 6799999999999999999999999985 578888654                                


Q ss_pred             ------ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEEe
Q psy2974         125 ------DIISISEGLLVRFRSDDTVVGKGFSASYIAID  156 (186)
Q Consensus       125 ------~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~  156 (186)
                            .++|.++.|+|.|+||.+..++||+|.|+++.
T Consensus        84 G~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~  121 (579)
T 2qqk_A           84 GNIAPPTIISSGSMLYIKFTSDYARQGAGFSLRYEIFK  121 (579)
T ss_dssp             TTSCCCCEECSSSEEEEEEECC---CCCBCEEEEEEEC
T ss_pred             CCCCCCCEEecCCEEEEEEEECCCCCCCceEEEEEEcc
Confidence                  25678999999999999999999999999874

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.95  E-value=3.7e-10  Score=72.57  Aligned_cols=52  Identities=33%  Similarity=0.483  Sum_probs=44.9

Q ss_pred             cEEEcC-CCCCccccccccccccCcc-cccccCCCceEEEecCCeeeecccccc
Q psy2974          25 VFSKIG-DSFKSQDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDC   76 (186)
Q Consensus        25 Gy~~~~-d~~~C~d~~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~~~~~~C   76 (186)
                      ||.+.. ++..|+|++||...+..|. +.|+|+.|+|.|.|++||.+..++++|
T Consensus        32 Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~C   85 (86)
T 1lmj_A           32 GYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC   85 (86)
T ss_dssp             SEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred             CcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCCcc
Confidence            887763 5789999999998766676 699999999999999999998888776

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=98.84  E-value=1.4e-09  Score=66.84  Aligned_cols=44  Identities=39%  Similarity=0.995  Sum_probs=40.4

Q ss_pred             ccccccccccccCcccccccCCC-ceEEEecCCeeeecccccccc
Q psy2974          35 SQDKDECMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        35 C~d~~eC~~~~~~C~~~C~n~~g-~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      ..|++||...++.|++.|.|++| +|.|.|++||.|..++++|.+
T Consensus         2 ~~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d   46 (69)
T 1kli_L            2 KDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP   46 (69)
T ss_dssp             CSCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccC
Confidence            46899999888899999999999 899999999999999999974

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.84  E-value=2.3e-09  Score=69.03  Aligned_cols=51  Identities=29%  Similarity=0.640  Sum_probs=45.1

Q ss_pred             cEEEcCCCCCccccccccccccCcccccccCCCceEEEe--cCCeeeeccccccc
Q psy2974          25 VFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSC--HNGYTLLENGHDCK   77 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C--~~G~~l~~~~~~C~   77 (186)
                      ||.+.++++.|++++||..  ..|.+.|+|++++|.|.|  ..||.+..+++.|.
T Consensus        32 G~~~~~~g~~C~dideC~~--~~C~~~C~n~~g~y~C~C~g~~G~~~~~~~~~C~   84 (87)
T 1z6c_A           32 GYRYNLKSKSCEDIDECSE--NMCAQLCVNYPGGYTCYCDGKKGFKLAQDQKSCE   84 (87)
T ss_dssp             TCEEETTTTEEECCCHHHH--SCCSSEECCCSSSCCEECCSSSCCBCCTTSSSCB
T ss_pred             CceECCCCCcCCCcCeeCC--CCCCCEEEccCCCEEEECCCCcCCcccCCCCcce
Confidence            9999999999999999975  468899999999999999  58888887777775

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.83  E-value=9.9e-10  Score=73.50  Aligned_cols=68  Identities=25%  Similarity=0.595  Sum_probs=20.8

Q ss_pred             CCCccccccccccccCcccccccCCCceEEEecCCeeeec-----ccccccc-CCcceeecCCCCcccCCCCCCC
Q psy2974          32 SFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLE-----NGHDCKE-GGCKYEITAPNGVIKTPNHPDY  100 (186)
Q Consensus        32 ~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~-----~~~~C~~-~~C~~~~~~~~G~i~sp~~p~~  100 (186)
                      +..| +++||...++.|.+.|+++.++|.|.|++||.+..     +...|.. ..|.+.+.+..|.+.+.+.+++
T Consensus        24 ~~~C-d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~~~C~n~~gsy~C~C~~Gy   97 (107)
T 2w2n_E           24 QGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGF   97 (107)
T ss_dssp             SCCB-SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEETTTEEEC-----------------------------
T ss_pred             CCCC-cCccCcCCCCCCCCEeEeCCCCeEEECCCCccccCCCccccccccCCCCCcCCeeecCCCCEEEECCCCc
Confidence            3345 45555554445555555555555566665555421     1122321 3344445555555555555444

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.81  E-value=8.9e-10  Score=89.43  Aligned_cols=59  Identities=31%  Similarity=0.639  Sum_probs=24.9

Q ss_pred             CCCCCC-cEEEcCCCCCccccccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974          19 PHDTLT-VFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        19 ~~~~~~-Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      +.+.+. ||.+.+|++.|+|++||. .+..|.+.|.|+.|+|.|.|++||.+..+++.|..
T Consensus        24 ~~C~C~~G~~l~~~~~~C~d~~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~~   83 (386)
T 3v65_B           24 VQCTCHTGYRLTEDGRTCQDVNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKA   83 (386)
T ss_dssp             -----------------------------CCTTEEC-----CCEECCTTEEECTTSSCEEE
T ss_pred             cEeECCCCceECCCCCccCccceeC-CcCcccCcCCCCCCCCeEEECCCceEcCCCCeECC
Confidence            444443 999999999999999998 34689999999999999999999999998999973

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.80  E-value=6.8e-09  Score=73.24  Aligned_cols=70  Identities=26%  Similarity=0.523  Sum_probs=50.4

Q ss_pred             CCCccCcCCCCCCCCCCCCCC--------cEEEcCCCCCccccccccccccCccccc-ccCCCceEEEecCCeeeecccc
Q psy2974           4 LDPRIEDKCNNCNESPHDTLT--------VFSKIGDSFKSQDKDECMTNNGGCQHEC-RNTIGSYICSCHNGYTLLENGH   74 (186)
Q Consensus         4 ~~~~~~~~C~~c~~~~~~~~~--------Gy~~~~d~~~C~d~~eC~~~~~~C~~~C-~n~~g~~~C~C~~G~~l~~~~~   74 (186)
                      +|++...-|.+ .+.|+++.+        ||.    |..|+++++|...++.|.+.| +++.++|.|.|++||.+..+++
T Consensus        48 ideC~~~pC~n-~g~C~~~~~~y~C~C~~G~~----G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~  122 (146)
T 1x7a_L           48 GDQCEPNPCLN-GGLCKDDINSYECWCQVGFE----GKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQK  122 (146)
T ss_dssp             --CCSSCSSCT-TCEEEECSSCEEEECCSSEE----STTTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSS
T ss_pred             cCcCCCCCCCC-CCEeECCCCCEEEecCCCCc----CCcCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCC
Confidence            34544445543 345555544        666    778988899987667788899 8999999999999998888888


Q ss_pred             cccc
Q psy2974          75 DCKE   78 (186)
Q Consensus        75 ~C~~   78 (186)
                      .|.+
T Consensus       123 ~C~~  126 (146)
T 1x7a_L          123 SCKP  126 (146)
T ss_dssp             SEEE
T ss_pred             cCCC
Confidence            8763

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=98.77  E-value=3.2e-09  Score=62.34  Aligned_cols=41  Identities=39%  Similarity=0.925  Sum_probs=36.6

Q ss_pred             cccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974          38 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        38 ~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      .+||...++.|.+.|+|++|+|.|.|++||.|..++++|.+
T Consensus         1 ~dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~d   41 (55)
T 2jkh_L            1 RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP   41 (55)
T ss_dssp             -CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeecc
Confidence            37888777889999999999999999999999999999974

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.76  E-value=3.8e-09  Score=86.14  Aligned_cols=52  Identities=31%  Similarity=0.655  Sum_probs=46.7

Q ss_pred             cEEEcCCCCCccccccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974          25 VFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      ||.+ .++..|+|++||.. +..|.+.|.|+.|+|.|.|++||.+..+++.|..
T Consensus        28 G~~~-~~~~~C~dideC~~-~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~~   79 (400)
T 3p5b_L           28 GFQL-VAQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA   79 (400)
T ss_dssp             TEEE-CSSSCEEECCCCST-TSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCCC
T ss_pred             CCCc-CCCCcccCchhhhc-cCCCCCccCCCccceeeeccccccccccccceee
Confidence            8888 68899999999984 4689999999999999999999999988888864

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=98.75  E-value=5e-09  Score=60.92  Aligned_cols=42  Identities=48%  Similarity=1.081  Sum_probs=36.7

Q ss_pred             ccccccccc--------ccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          36 QDKDECMTN--------NGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        36 ~d~~eC~~~--------~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      .||+||...        ...|.+.|+|++|+|.|.|++||.+..++++|.
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~   51 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             CccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccC
Confidence            578999864        367999999999999999999999988888885

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.69  E-value=2e-08  Score=63.77  Aligned_cols=48  Identities=27%  Similarity=0.665  Sum_probs=36.1

Q ss_pred             cEEEcCCCCCccccccccccccCcc-cccccCCCceEEEecCCeeeecccccc
Q psy2974          25 VFSKIGDSFKSQDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDC   76 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~~~~~~C   76 (186)
                      ||.+  ++..|++++||... ..|. +.|+|+.++|.|.|++||.+..+ +.|
T Consensus        33 Gy~~--~g~~C~dideC~~~-~~C~~~~C~n~~g~y~C~C~~G~~g~~~-~~C   81 (82)
T 1emn_A           33 GYIL--AGNECVDTDECSVG-NPCGNGTCKNVIGGFECTCEEGFEPGPM-MTC   81 (82)
T ss_dssp             TEEE--ETTEEEECCGGGTC-CTTSSSCEEECSSSEEECCSSSSCCCSS-SCC
T ss_pred             CeEC--CCCccCCcccccCC-CCCCCCEeECCCCCEEeECCCCeEeCCC-Ccc
Confidence            7766  47788889998742 3564 68999999999999999887655 444

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=98.60  E-value=3.6e-08  Score=58.57  Aligned_cols=47  Identities=34%  Similarity=0.796  Sum_probs=37.9

Q ss_pred             ccccccCcccccccCC-CceEEEecCCeeeecccccccc---CCcceeecC
Q psy2974          41 CMTNNGGCQHECRNTI-GSYICSCHNGYTLLENGHDCKE---GGCKYEITA   87 (186)
Q Consensus        41 C~~~~~~C~~~C~n~~-g~~~C~C~~G~~l~~~~~~C~~---~~C~~~~~~   87 (186)
                      |...++.|+|.|.|++ |+|.|.|++||.|..++++|.+   ..|+..+.+
T Consensus         2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~~pC~~~c~n   52 (59)
T 2wph_E            2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPCGRVSVS   52 (59)
T ss_dssp             TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEESSSSCTTCCCSC
T ss_pred             CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccCCCCCCCCCcccc
Confidence            5556678999999999 6999999999999999999974   345554433

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=98.59  E-value=1.8e-08  Score=71.05  Aligned_cols=53  Identities=36%  Similarity=0.666  Sum_probs=45.6

Q ss_pred             CcEEEcCCCCCccccccccccccCccc-ccccCCCceEEEecCCeeeeccccccc
Q psy2974          24 TVFSKIGDSFKSQDKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        24 ~Gy~~~~d~~~C~d~~eC~~~~~~C~~-~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      .||.+ .++..|+||+||...+..|.+ .|+|+.++|.|.|++||.+..++++|+
T Consensus        94 ~Gy~~-~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C~  147 (147)
T 2w86_A           94 KGYSR-IKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL  147 (147)
T ss_dssp             TTEEE-EETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred             Ccccc-CCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence            49976 368899999999977777864 899999999999999999988888773

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.57  E-value=8e-08  Score=67.31  Aligned_cols=94  Identities=26%  Similarity=0.467  Sum_probs=63.0

Q ss_pred             cCcCCCCCCCCCCCC-----CCcEEEc-----CCCCCccccccccccc-cCcc--cccccCCCceEEEecCCeeeecc--
Q psy2974           8 IEDKCNNCNESPHDT-----LTVFSKI-----GDSFKSQDKDECMTNN-GGCQ--HECRNTIGSYICSCHNGYTLLEN--   72 (186)
Q Consensus         8 ~~~~C~~c~~~~~~~-----~~Gy~~~-----~d~~~C~d~~eC~~~~-~~C~--~~C~n~~g~~~C~C~~G~~l~~~--   72 (186)
                      .+..|.+ +..|+++     ..||...     .++..|++++||.... ..|.  +.|+++.++|.|.|++||.+...  
T Consensus         5 C~~~C~~-~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~   83 (143)
T 2bou_A            5 CARWCPQ-DSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAK   83 (143)
T ss_dssp             CCTTCCT-TEEESSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCS
T ss_pred             CcCcCCC-CCEEcCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCcc
Confidence            3445543 4444443     2289754     4567899999998753 2575  79999999999999999987532  


Q ss_pred             ------ccccc------c--CCcc--eeecCCCCcccCCCCCCCCC
Q psy2974          73 ------GHDCK------E--GGCK--YEITAPNGVIKTPNHPDYYP  102 (186)
Q Consensus        73 ------~~~C~------~--~~C~--~~~~~~~G~i~sp~~p~~y~  102 (186)
                            +..|.      .  ..|.  +.+.+..|.+.+.+.+++..
T Consensus        84 ~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g  129 (143)
T 2bou_A           84 TFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKP  129 (143)
T ss_dssp             CBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCB
T ss_pred             ccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCccc
Confidence                  22443      1  4464  56777888888888777654

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.57  E-value=4.5e-08  Score=62.86  Aligned_cols=66  Identities=24%  Similarity=0.501  Sum_probs=52.2

Q ss_pred             cccccccccccCc-ccccccCCCceEEEecCCeeeeccccccc------cCCcceeecCCCCcccCCC--CCCCC
Q psy2974          36 QDKDECMTNNGGC-QHECRNTIGSYICSCHNGYTLLENGHDCK------EGGCKYEITAPNGVIKTPN--HPDYY  101 (186)
Q Consensus        36 ~d~~eC~~~~~~C-~~~C~n~~g~~~C~C~~G~~l~~~~~~C~------~~~C~~~~~~~~G~i~sp~--~p~~y  101 (186)
                      +|++||...+..| .+.|+++.++|.|.|++||.+..+++.|+      ...|.+.+.+..|.+.+.+  ++++.
T Consensus         1 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~~~C~n~~g~y~C~C~g~~G~~   75 (87)
T 1z6c_A            1 KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCAQLCVNYPGGYTCYCDGKKGFK   75 (87)
T ss_dssp             CCSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCSSEECCCSSSCCEECCSSSCCB
T ss_pred             CccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCCCEEEccCCCEEEECCCCcCCc
Confidence            3789999877667 57899999999999999999877666664      3567777888888887766  66653

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.57  E-value=3e-08  Score=66.21  Aligned_cols=61  Identities=30%  Similarity=0.634  Sum_probs=14.6

Q ss_pred             CCCCCCCCCC--------cEEEcCCCCCccccccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          15 CNESPHDTLT--------VFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        15 c~~~~~~~~~--------Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      |...|+++.+        ||.+. ++..|+|++||.. +..|.+.|+|+.++|.|.|++||.+..++++|+
T Consensus        39 C~~~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~~-~~~C~~~C~n~~gsy~C~C~~Gy~~~~d~~~C~  107 (107)
T 2w2n_E           39 CSYVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK  107 (107)
T ss_dssp             CSSEEECCSBSCEEECCTTCEEE-TTTEEEC----------------------------------------
T ss_pred             CCCEeEeCCCCeEEECCCCcccc-CCCccccccccCC-CCCcCCeeecCCCCEEEECCCCceECCCCCccC
Confidence            3345666544        78764 6789999999984 357889999999999999999999988887773

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=98.56  E-value=3e-08  Score=70.99  Aligned_cols=53  Identities=38%  Similarity=0.666  Sum_probs=47.3

Q ss_pred             cEEEcCCCCCccccccccccccCcc-cccccCCCceEEEecCCeeeeccccccc
Q psy2974          25 VFSKIGDSFKSQDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      ||...+++..|+||+||...+..|. +.|+|+.++|.|.|++||.+..++++|+
T Consensus       109 G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~C~  162 (162)
T 1uzk_A          109 GFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD  162 (162)
T ss_dssp             TEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred             CcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCccC
Confidence            8998888889999999987666787 5999999999999999999988888873

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.53  E-value=1.2e-07  Score=64.03  Aligned_cols=59  Identities=29%  Similarity=0.569  Sum_probs=47.3

Q ss_pred             CCCCCCCCC--------cEEEcCCCCCcccc---ccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974          16 NESPHDTLT--------VFSKIGDSFKSQDK---DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        16 ~~~~~~~~~--------Gy~~~~d~~~C~d~---~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      ++.|+++.+        ||.    +..|+++   ++|...++.|.+.|+++.++|.|.|++||.+..+++.|.+
T Consensus        25 ~g~C~~~~~~y~C~C~~G~~----G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~   94 (114)
T 1aut_L           25 HGTCIDGIGSFSCDCRSGWE----GRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP   94 (114)
T ss_dssp             SEEECCCSSCCCEEECTTEE----STTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred             cCCCCCCCCCcEeeCCCCCc----CCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCc
Confidence            445655544        776    6679875   4698767789999999999999999999999888888863

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=98.51  E-value=3e-08  Score=57.12  Aligned_cols=38  Identities=37%  Similarity=0.924  Sum_probs=33.5

Q ss_pred             ccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974          41 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        41 C~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      |...++.|++.|+|++|+|.|.|++||.|..++++|.+
T Consensus         1 C~~~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~d   38 (51)
T 1kig_L            1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVS   38 (51)
T ss_dssp             CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEE
T ss_pred             CCCCCCCcCCEeEcCCCCeEEeCCCCcEECCCCCcccc
Confidence            44556789999999999999999999999999999974

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.49  E-value=4.6e-08  Score=72.06  Aligned_cols=50  Identities=34%  Similarity=0.739  Sum_probs=35.1

Q ss_pred             cEEEcCCCCCccc-c-ccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974          25 VFSKIGDSFKSQD-K-DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        25 Gy~~~~d~~~C~d-~-~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      ||.    |..|++ + ++|...++.|.+.|++..++|.|.|++||.+..++..|..
T Consensus        70 Gf~----G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~  121 (195)
T 1nfu_B           70 GFE----GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP  121 (195)
T ss_dssp             ---------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             Cce----eccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCcccc
Confidence            676    778986 5 8898877788889999999999999999998888888863

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.46  E-value=6.6e-08  Score=65.66  Aligned_cols=50  Identities=32%  Similarity=0.641  Sum_probs=35.8

Q ss_pred             cEEEcCCCCCccccccccccccCcccccccCCCceEEEecCCeeeecc-cccc
Q psy2974          25 VFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLEN-GHDC   76 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~-~~~C   76 (186)
                      ||.+.. +..|++++||... ..|.+.|+|+.++|.|.|++||.+..+ ++.|
T Consensus        68 Gy~~~~-g~~C~dideC~~~-~~C~~~C~n~~g~y~C~C~~G~~g~~~~g~~C  118 (118)
T 1dx5_I           68 GYILDD-GFICTDIDECENG-GFCSGVCHNLPGTFECICGPDSALAGQIGTDC  118 (118)
T ss_dssp             TEEEET-TTEEEECCHHHHC-SSCSSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred             CccCCC-CCccccccccCCC-CCCcCeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence            777665 6778888888762 456777888888888888888876655 4443

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.46  E-value=6.6e-08  Score=67.14  Aligned_cols=46  Identities=35%  Similarity=0.779  Sum_probs=32.1

Q ss_pred             CCCccc-c-ccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          32 SFKSQD-K-DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        32 ~~~C~d-~-~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      |..|++ + ++|...++.|.+.|+++.++|.|.|++||.+..+++.|.
T Consensus        73 G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~  120 (134)
T 2vh0_B           73 GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACI  120 (134)
T ss_dssp             --------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccC
Confidence            677877 5 788876667888888888888899999988887777775

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.46  E-value=1e-07  Score=66.81  Aligned_cols=63  Identities=25%  Similarity=0.482  Sum_probs=49.6

Q ss_pred             CCCCCCCCC--------cEEEcCC--------CCCccccccccccccCcc--cccccCCCceEEEecCCeeeeccccccc
Q psy2974          16 NESPHDTLT--------VFSKIGD--------SFKSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        16 ~~~~~~~~~--------Gy~~~~d--------~~~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      +..|+++.+        ||.+...        +..|++++||......|.  +.|+|+.++|.|.|++||.+..+.+.|.
T Consensus        58 ~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~  137 (143)
T 2bou_A           58 FSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQ  137 (143)
T ss_dssp             TEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSB
T ss_pred             CCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCc
Confidence            355665544        8887643        458999999987556786  7999999999999999999888777776


Q ss_pred             c
Q psy2974          78 E   78 (186)
Q Consensus        78 ~   78 (186)
                      +
T Consensus       138 ~  138 (143)
T 2bou_A          138 K  138 (143)
T ss_dssp             T
T ss_pred             c
Confidence            4

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.45  E-value=2.2e-07  Score=58.85  Aligned_cols=66  Identities=32%  Similarity=0.626  Sum_probs=48.9

Q ss_pred             CccccccccccccCcc-cccccCCCceEEEecCCeeeeccccccc-------cCCcc-eeecCCCCcccCCCCCCCCC
Q psy2974          34 KSQDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDCK-------EGGCK-YEITAPNGVIKTPNHPDYYP  102 (186)
Q Consensus        34 ~C~d~~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~~~~~~C~-------~~~C~-~~~~~~~G~i~sp~~p~~y~  102 (186)
                      +|.|++||.. +..|. +.|+++.++|.|.|++||.+.  +..|.       ...|. +.+.+..|.+.+.+.+++..
T Consensus         1 sC~dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~~--g~~C~dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g   75 (82)
T 1emn_A            1 SAVDMDECKE-PDVCKHGQCINTDGSYRCECPFGYILA--GNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEP   75 (82)
T ss_dssp             CCCCCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEEE--TTEEEECCGGGTCCTTSSSCEEECSSSEEECCSSSSCC
T ss_pred             CCCccccCCC-CCCcCCCEEEecCCCEEEECCCCeECC--CCccCCcccccCCCCCCCCEeECCCCCEEeECCCCeEe
Confidence            4889999987 45675 489999999999999999863  44443       23453 45677778888887777654

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=98.43  E-value=9.5e-08  Score=55.46  Aligned_cols=38  Identities=42%  Similarity=1.147  Sum_probs=33.8

Q ss_pred             ccccccCcccccccCCC-ceEEEecCCeeeecccccccc
Q psy2974          41 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        41 C~~~~~~C~~~C~n~~g-~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      |...++.|+|.|.|+++ +|.|.|++||.|..++++|.+
T Consensus         2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d   40 (53)
T 2bz6_L            2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP   40 (53)
T ss_dssp             TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccC
Confidence            55566789999999999 799999999999999999974

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.41  E-value=4.4e-08  Score=79.41  Aligned_cols=73  Identities=34%  Similarity=0.844  Sum_probs=16.5

Q ss_pred             cccccccccccCcccccccCCCceEEEecCCeeeecccccccc-------CCcceeecCCCCcccCCCCCCCC--CCCCc
Q psy2974          36 QDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE-------GGCKYEITAPNGVIKTPNHPDYY--PSKRE  106 (186)
Q Consensus        36 ~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~-------~~C~~~~~~~~G~i~sp~~p~~y--~~~~~  106 (186)
                      .|++||...++.|.+.|.+..|+|.|.|++||.+..+++.|.+       ..|.+.+.+..|.+.|.+.+++.  +....
T Consensus         1 ~~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~   80 (386)
T 3v65_B            1 TGEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRS   80 (386)
T ss_dssp             ---------------------------------------------------CCTTEEC-----CCEECCTTEEECTTSSC
T ss_pred             CCcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcccCcCCCCCCCCeEEECCCceEcCCCCe
Confidence            3689999888899999999999999999999998888888853       45666788888999998888764  33455


Q ss_pred             eE
Q psy2974         107 CI  108 (186)
Q Consensus       107 C~  108 (186)
                      |.
T Consensus        81 C~   82 (386)
T 3v65_B           81 CK   82 (386)
T ss_dssp             EE
T ss_pred             EC
Confidence            64

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.40  E-value=5.8e-07  Score=70.87  Aligned_cols=70  Identities=34%  Similarity=0.658  Sum_probs=53.2

Q ss_pred             CCCccCcCCCCCCCCCCCCCC--------cEEEcCCCCCcc-cccccccc-ccCcccccccCCCceEEEecCCeeeeccc
Q psy2974           4 LDPRIEDKCNNCNESPHDTLT--------VFSKIGDSFKSQ-DKDECMTN-NGGCQHECRNTIGSYICSCHNGYTLLENG   73 (186)
Q Consensus         4 ~~~~~~~~C~~c~~~~~~~~~--------Gy~~~~d~~~C~-d~~eC~~~-~~~C~~~C~n~~g~~~C~C~~G~~l~~~~   73 (186)
                      +|++...-|.+ .+.|.++.+        ||.    |..|+ |++||... +..|.+.|.|..++|.|.|++||.+..+.
T Consensus         5 ~~~C~~~pC~~-~g~C~~~~~~~~C~C~~g~~----g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~   79 (317)
T 3h5c_B            5 GSPCISQPCLH-NGSCQDSIWGYTCTCSPGYE----GSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDH   79 (317)
T ss_dssp             -CCTTSCCCTT-TCCCCCCSSSCCCCCSSSCC----SSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTS
T ss_pred             CCcCCCCCCCC-CCEeECCCCCeEEECCCCCc----CCccccCcccCCCCCCCCCcCccccCCCeeEEeccccccccccc
Confidence            45666566644 444544433        775    78898 99999863 36798899999999999999999998888


Q ss_pred             ccccc
Q psy2974          74 HDCKE   78 (186)
Q Consensus        74 ~~C~~   78 (186)
                      ..|.+
T Consensus        80 ~~C~~   84 (317)
T 3h5c_B           80 KQCVP   84 (317)
T ss_dssp             SCCEE
T ss_pred             ccccc
Confidence            88874

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.36  E-value=1.6e-07  Score=82.80  Aligned_cols=52  Identities=31%  Similarity=0.669  Sum_probs=46.4

Q ss_pred             cEEEcCCCCCccccccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974          25 VFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      ||.+ .+++.|+|++||. .+..|.+.|+|+.|+|.|.|++||.+..++++|..
T Consensus       340 Gy~l-~~g~~C~dideC~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~  391 (791)
T 3m0c_C          340 GFQL-VAQRRCEDIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA  391 (791)
T ss_dssp             TCEE-ETTTEEECCCCCS-SSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEE
T ss_pred             CCcc-CCCCccccCcccC-CCCCCCCeeecCCCCceeecCCCCEeCCCCceeee
Confidence            7877 7889999999998 45689999999999999999999999888888864

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.33  E-value=6.1e-07  Score=73.03  Aligned_cols=62  Identities=29%  Similarity=0.691  Sum_probs=52.1

Q ss_pred             ccccccccCcccccccCCCceEEEecCCeeeecccccccc-------CCcceeecCCCCcccCCCCCCCC
Q psy2974          39 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE-------GGCKYEITAPNGVIKTPNHPDYY  101 (186)
Q Consensus        39 ~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~-------~~C~~~~~~~~G~i~sp~~p~~y  101 (186)
                      +||...+..|.+.|.|++++|.|.|++||.+ .+++.|.+       ..|.+.+.+..|.+.|.+.+++.
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~~~~~C~~~C~n~~g~~~C~C~~g~~   69 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQ   69 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSSEEEECCTTEEE-CSSSCEEECCCCSTTSSCSSCCBCCSSSCBCCCCTTCC
T ss_pred             CcccCCCCCCCCEeECCCCCeEEECCCCCCc-CCCCcccCchhhhccCCCCCccCCCccceeeecccccc
Confidence            5888877889999999999999999999997 45666652       45777788899999999988875

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.32  E-value=3.6e-07  Score=79.51  Aligned_cols=52  Identities=31%  Similarity=0.655  Sum_probs=46.3

Q ss_pred             cEEEcCCCCCccccccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974          25 VFSKIGDSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      ||.+ .+++.|++++||.. +..|.+.|+|+.|+|.|.|++||.+..++++|..
T Consensus       322 G~~~-~~~~~C~dideC~~-~~~C~~~C~n~~g~y~C~C~~G~~~~~~~~~C~~  373 (699)
T 1n7d_A          322 GFQL-VAQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA  373 (699)
T ss_dssp             SSCC-CSSSCCCCCCCCSS-SSSCTTTCCBCSSCBCCCCCSSCBCCSSCCCCBC
T ss_pred             CeEc-CCCCcccCccccCC-CCccccccccCCCCeeeeeecccccCCCCCcccc
Confidence            8887 78899999999974 3579999999999999999999999888888863

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.32  E-value=4.7e-07  Score=57.85  Aligned_cols=67  Identities=25%  Similarity=0.455  Sum_probs=49.8

Q ss_pred             cccccccccccCccc-ccccCCCceEEEecCCeeeec-cccccc------c--CCcc-eeecCCCCcccCCCCCCCCC
Q psy2974          36 QDKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLE-NGHDCK------E--GGCK-YEITAPNGVIKTPNHPDYYP  102 (186)
Q Consensus        36 ~d~~eC~~~~~~C~~-~C~n~~g~~~C~C~~G~~l~~-~~~~C~------~--~~C~-~~~~~~~G~i~sp~~p~~y~  102 (186)
                      +|++||...+..|.+ .|+++.++|.|.|++||.+.. +++.|.      .  ..|. +.+.+..|.+.+.+.+++..
T Consensus         1 ~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~   78 (86)
T 1lmj_A            1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQL   78 (86)
T ss_dssp             CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCC
T ss_pred             CccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCccc
Confidence            378999987777864 899999999999999998642 244553      2  2354 56777888888888777653

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=98.31  E-value=6.8e-07  Score=76.51  Aligned_cols=82  Identities=23%  Similarity=0.388  Sum_probs=60.1

Q ss_pred             cEEEcCCCCCccccccccccccCccc-----ccccCCCceEEE-ecCCeeeec-----------cccccc------c--C
Q psy2974          25 VFSKIGDSFKSQDKDECMTNNGGCQH-----ECRNTIGSYICS-CHNGYTLLE-----------NGHDCK------E--G   79 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~~~~~~C~~-----~C~n~~g~~~C~-C~~G~~l~~-----------~~~~C~------~--~   79 (186)
                      ||.  ++++.|++++||...++.|.+     .|+++.++|.|. |++||....           .+..|.      .  .
T Consensus        33 Gyt--Gdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~  110 (634)
T 1yo8_A           33 GFL--GNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTH  110 (634)
T ss_dssp             TBC--SCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCC
T ss_pred             ccC--CCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCc
Confidence            775  556899999999987777864     899999999998 999998543           122343      2  3


Q ss_pred             Ccc--eeecCCC----CcccCCCCCCCCCCCCceE
Q psy2974          80 GCK--YEITAPN----GVIKTPNHPDYYPSKRECI  108 (186)
Q Consensus        80 ~C~--~~~~~~~----G~i~sp~~p~~y~~~~~C~  108 (186)
                      .|.  +.+.+..    |.+.|.+.+++......|.
T Consensus       111 pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce  145 (634)
T 1yo8_A          111 NCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICG  145 (634)
T ss_dssp             CCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEE
T ss_pred             ccccCccccccccccccceeeeccCCccccCcccc
Confidence            564  4566666    8888888888776556665

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.27  E-value=6.6e-07  Score=62.64  Aligned_cols=69  Identities=35%  Similarity=0.756  Sum_probs=51.2

Q ss_pred             CCCccCcCCCCCCCCCCCCCC--------cEEEcCCCCCccc-cccc---cccccCcccccccCCC-ceEEEecCCeeee
Q psy2974           4 LDPRIEDKCNNCNESPHDTLT--------VFSKIGDSFKSQD-KDEC---MTNNGGCQHECRNTIG-SYICSCHNGYTLL   70 (186)
Q Consensus         4 ~~~~~~~~C~~c~~~~~~~~~--------Gy~~~~d~~~C~d-~~eC---~~~~~~C~~~C~n~~g-~~~C~C~~G~~l~   70 (186)
                      +|++...-|.+ .+.|+++.+        ||.    |..|++ +++|   ...++.|.+.|+++.+ +|.|.|++||.+.
T Consensus        47 id~C~~~pC~n-~g~C~~~~g~y~C~C~~G~~----G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~  121 (142)
T 2c4f_L           47 GDQCASSPCQN-GGSCKDQLQSYICFCLPAFE----GRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLL  121 (142)
T ss_dssp             CCGGGGCCCCT-TCEEEEETTEEEEECCTTEE----STTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEEC
T ss_pred             cCcCcCCCcCC-CCEEeCCCCCEEeeCCCCcc----CCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceEC
Confidence            45555555644 445655544        776    788986 6774   4445678889999999 9999999999999


Q ss_pred             ccccccc
Q psy2974          71 ENGHDCK   77 (186)
Q Consensus        71 ~~~~~C~   77 (186)
                      .+++.|.
T Consensus       122 ~dG~~C~  128 (142)
T 2c4f_L          122 ADGVSCT  128 (142)
T ss_dssp             TTSSCEE
T ss_pred             CCCCCCC
Confidence            8888886

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.18  E-value=1.6e-06  Score=60.98  Aligned_cols=75  Identities=28%  Similarity=0.604  Sum_probs=49.5

Q ss_pred             CCCccccccccccccCcc--cccccCCCceEEEecCCeeeecccccccc--------CCcceee-cCCCCcccCCCCCCC
Q psy2974          32 SFKSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCKE--------GGCKYEI-TAPNGVIKTPNHPDY  100 (186)
Q Consensus        32 ~~~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~~--------~~C~~~~-~~~~G~i~sp~~p~~  100 (186)
                      ...|.|+++|...  +|.  +.|++..++|.|.|++||.    +..|..        ..|...+ .+..|.+.+.+.+++
T Consensus        42 ~~~c~dideC~~~--pC~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy  115 (146)
T 1x7a_L           42 WKQYVDGDQCEPN--PCLNGGLCKDDINSYECWCQVGFE----GKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGY  115 (146)
T ss_dssp             --------CCSSC--SSCTTCEEEECSSCEEEECCSSEE----STTTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTE
T ss_pred             hccCCCcCcCCCC--CCCCCCEeECCCCCEEEecCCCCc----CCcCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCc
Confidence            3479999999864  464  5999999999999999997    445531        3466677 778888988888887


Q ss_pred             C--CCCCceEEEEE
Q psy2974         101 Y--PSKRECIWHFT  112 (186)
Q Consensus       101 y--~~~~~C~w~i~  112 (186)
                      .  .....|...+.
T Consensus       116 ~l~~dG~~C~~~~~  129 (146)
T 1x7a_L          116 RLAPDQKSCKPAVP  129 (146)
T ss_dssp             EECTTSSSEEECSS
T ss_pred             EeCCCCCcCCCCCC
Confidence            5  44566765443

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=98.15  E-value=9e-07  Score=63.68  Aligned_cols=52  Identities=40%  Similarity=0.961  Sum_probs=42.8

Q ss_pred             CcEEEcCCCCCccccccccccccC---cccccccCCCceEEEecCCeeeecccccccc
Q psy2974          24 TVFSKIGDSFKSQDKDECMTNNGG---CQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        24 ~Gy~~~~d~~~C~d~~eC~~~~~~---C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      .||.+.   ..+.+++||...++.   |.+.|.|..|+|.|.|++||.+..++++|.+
T Consensus       113 ~Gf~~~---~~~~di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~  167 (170)
T 1szb_A          113 TGFEAF---YAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE  167 (170)
T ss_dssp             CEEEEE---EEEEECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             cCceee---eeccccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCCcccc
Confidence            466542   246789999876554   9999999999999999999999999988863

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=98.14  E-value=4.2e-06  Score=57.89  Aligned_cols=94  Identities=19%  Similarity=0.411  Sum_probs=60.9

Q ss_pred             CCCcc--CcCCCCCCCCCCCCCC--------cEEEcCCCCCcc-ccccccccccCcccccccCCCceEEEecCCeeeec-
Q psy2974           4 LDPRI--EDKCNNCNESPHDTLT--------VFSKIGDSFKSQ-DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLE-   71 (186)
Q Consensus         4 ~~~~~--~~~C~~c~~~~~~~~~--------Gy~~~~d~~~C~-d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~-   71 (186)
                      +|+..  ...|.+ ++.|+++.+        ||.    +..|+ ++++|...+....+.|++..++|.|.|++||.... 
T Consensus         5 ideC~~~~~~C~~-~g~C~~~~g~~~C~C~~Gy~----G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C   79 (135)
T 2vj3_A            5 VDECSLGANPCEH-AGKCINTLGSFECQCLQGYT----GPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHC   79 (135)
T ss_dssp             CCTTTSSSCSSST-TCEEEECSSSEEEECCTTEE----STTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSS
T ss_pred             cccccCCCCCCCC-CCEeECCCCCEEEECCCCCc----CCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcc
Confidence            55544  345644 456666544        776    67885 89999875433347899999999999999997321 


Q ss_pred             --cccccccCCcc--eeecCCCCcccCCCCCCCCC
Q psy2974          72 --NGHDCKEGGCK--YEITAPNGVIKTPNHPDYYP  102 (186)
Q Consensus        72 --~~~~C~~~~C~--~~~~~~~G~i~sp~~p~~y~  102 (186)
                        +...|....|.  +.+.+..|.+.+.+.+++..
T Consensus        80 ~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G  114 (135)
T 2vj3_A           80 EVNTDECASSPCLHNGRCLDKINEFQCECPTGFTG  114 (135)
T ss_dssp             CEECCTTTTCCSTTTCEEEECSSCEEEECCTTEES
T ss_pred             eecCCcccCCCcCCCCEeECCCCCeEEECCCCCcC
Confidence              11223334443  45666677777777777653

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=98.14  E-value=5.9e-07  Score=65.59  Aligned_cols=83  Identities=20%  Similarity=0.444  Sum_probs=57.7

Q ss_pred             cEEEcCCCCCcccccccccc--ccCcc--cccccCC-----CceEEEecCCeeeeccc---cccccCCcc--eeec----
Q psy2974          25 VFSKIGDSFKSQDKDECMTN--NGGCQ--HECRNTI-----GSYICSCHNGYTLLENG---HDCKEGGCK--YEIT----   86 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~~~--~~~C~--~~C~n~~-----g~~~C~C~~G~~l~~~~---~~C~~~~C~--~~~~----   86 (186)
                      ||... ++..|+++++|...  ...|.  +.|+++.     ++|.|.|++||......   ..|....|.  +.+.    
T Consensus        32 G~~g~-~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~~~~  110 (186)
T 1z1y_A           32 GLVHL-SENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYL  110 (186)
T ss_dssp             TEEEE-ETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTCCCCTTEEEEEEEE
T ss_pred             CCccC-CCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCCCCCCCCEEeeCCc
Confidence            88765 56789999999854  45675  6899999     89999999999865321   345444453  4454    


Q ss_pred             CCCCcccCCCCCCCCC---CCCceE
Q psy2974          87 APNGVIKTPNHPDYYP---SKRECI  108 (186)
Q Consensus        87 ~~~G~i~sp~~p~~y~---~~~~C~  108 (186)
                      +..|.+.+.+.+++..   ....|.
T Consensus       111 ~~~g~~~C~C~~Gy~g~~~~~~~C~  135 (186)
T 1z1y_A          111 SEIQSAGCSCAIGXVPNPEDEXXCT  135 (186)
T ss_dssp             TTEEEEEEEECTEEEEETTTTTEEE
T ss_pred             CCCCCceEECCCCCcccCCCCCcce
Confidence            6667777777776654   335554

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=97.99  E-value=2.7e-06  Score=66.08  Aligned_cols=48  Identities=40%  Similarity=0.809  Sum_probs=40.4

Q ss_pred             cccccccc-ccCcccccccCCCceEEEecCCeeeecccccccc---CCccee
Q psy2974          37 DKDECMTN-NGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE---GGCKYE   84 (186)
Q Consensus        37 d~~eC~~~-~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~---~~C~~~   84 (186)
                      +.|||... ++.|.|.|.++.++|.|.|+.||.+..+.++|.+   ..|+..
T Consensus         1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~CG~~   52 (283)
T 3f1s_B            1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGVL   52 (283)
T ss_dssp             --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCTTCC
T ss_pred             CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccccccCcc
Confidence            46899987 7899999999999999999999999999999975   356643

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=97.93  E-value=4.9e-06  Score=55.91  Aligned_cols=79  Identities=25%  Similarity=0.512  Sum_probs=48.7

Q ss_pred             Cccccccccccc------cCc--ccccccCCCceEEEecCCeeeeccc-----cccc--cCCcceeecCCCCcccCCCCC
Q psy2974          34 KSQDKDECMTNN------GGC--QHECRNTIGSYICSCHNGYTLLENG-----HDCK--EGGCKYEITAPNGVIKTPNHP   98 (186)
Q Consensus        34 ~C~d~~eC~~~~------~~C--~~~C~n~~g~~~C~C~~G~~l~~~~-----~~C~--~~~C~~~~~~~~G~i~sp~~p   98 (186)
                      .+.|++||...+      ..|  .+.|++..++|.|.|++||....-.     ..|.  ...|...+.+..|.+.+.+.+
T Consensus         2 ~~~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~   81 (114)
T 1aut_L            2 KHVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAP   81 (114)
T ss_dssp             ------CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCT
T ss_pred             cceecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCC
Confidence            467889998865      224  3589999999999999999732100     1232  233555777888889988888


Q ss_pred             CCC--CCCCceEEEEE
Q psy2974          99 DYY--PSKRECIWHFT  112 (186)
Q Consensus        99 ~~y--~~~~~C~w~i~  112 (186)
                      ++.  .....|...+.
T Consensus        82 G~~~~~~g~~C~~~~~   97 (114)
T 1aut_L           82 GYKLGDDLLQCHPAVK   97 (114)
T ss_dssp             TEEECTTSSCEEECSS
T ss_pred             CeeECCCCCccCcCcc
Confidence            875  34566765443

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.93  E-value=7.8e-06  Score=50.21  Aligned_cols=41  Identities=27%  Similarity=0.523  Sum_probs=30.6

Q ss_pred             cccccccccccCcc--cccccCCCceEEEe-cCCeeeecccccc
Q psy2974          36 QDKDECMTNNGGCQ--HECRNTIGSYICSC-HNGYTLLENGHDC   76 (186)
Q Consensus        36 ~d~~eC~~~~~~C~--~~C~n~~g~~~C~C-~~G~~l~~~~~~C   76 (186)
                      +||+||......|.  +.|+|++|+|.|.+ ..||....++..+
T Consensus         1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~~   44 (71)
T 2kl7_A            1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGP   44 (71)
T ss_dssp             CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCSSC
T ss_pred             CccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCCcc
Confidence            37899987666785  58999999999984 5677765555443

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=97.92  E-value=7.1e-06  Score=55.47  Aligned_cols=89  Identities=25%  Similarity=0.476  Sum_probs=57.3

Q ss_pred             CCCCccCcCCCCCCCCCCCC-CC--------cEEEcCCCCCccccccccc--cccCcccccccCCCceEEEecCCeeeec
Q psy2974           3 RLDPRIEDKCNNCNESPHDT-LT--------VFSKIGDSFKSQDKDECMT--NNGGCQHECRNTIGSYICSCHNGYTLLE   71 (186)
Q Consensus         3 ~~~~~~~~~C~~c~~~~~~~-~~--------Gy~~~~d~~~C~d~~eC~~--~~~~C~~~C~n~~g~~~C~C~~G~~l~~   71 (186)
                      -+|+....-|.   ..|+++ .+        ||.+...     ++++|..  .+..|.+.|++ .++|.|.|++||.+..
T Consensus         3 dideC~~~pC~---~~C~~~~~g~y~C~C~~Gy~g~~~-----~~~~C~~~C~~~~C~~~C~~-~~~y~C~C~~Gy~~~~   73 (118)
T 1dx5_I            3 PVDPCFRANCE---YQCQPLDQTSYLCVCAEGFAPIPH-----EPHRCQMFCNQTACPADCDP-NTQASCECPEGYILDD   73 (118)
T ss_dssp             CCCGGGGCCCS---SEEEECSSSCEEEECCTTEEEETT-----EEEEEEECCCSSEEECEECT-TSTTCEECCTTEEEET
T ss_pred             ccccCCCCCCC---CCCCCCCCCCEEeECCCCccccCC-----CCCccccccCCCCCCCcccC-CCCeEeECCCCccCCC
Confidence            35665444452   356666 43        7765532     3445543  23567788988 5899999999998764


Q ss_pred             cccccc------c-CCcceeecCCCCcccCCCCCCCC
Q psy2974          72 NGHDCK------E-GGCKYEITAPNGVIKTPNHPDYY  101 (186)
Q Consensus        72 ~~~~C~------~-~~C~~~~~~~~G~i~sp~~p~~y  101 (186)
                       ++.|.      . ..|++.+.+..|.+.+.+.+++.
T Consensus        74 -g~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~  109 (118)
T 1dx5_I           74 -GFICTDIDECENGGFCSGVCHNLPGTFECICGPDSA  109 (118)
T ss_dssp             -TTEEEECCHHHHCSSCSSEEEECSSSEEEEECSSSS
T ss_pred             -CCccccccccCCCCCCcCeEEeCCCCEEEECCCCCc
Confidence             55553      3 56767777778888877776654

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.85  E-value=4.4e-06  Score=66.66  Aligned_cols=40  Identities=35%  Similarity=0.904  Sum_probs=27.4

Q ss_pred             cccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974          38 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        38 ~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      ++||. .++.|+|.|.|++|+|.|.|++||.+..++++|..
T Consensus         1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~   40 (349)
T 3v64_C            1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKA   40 (349)
T ss_dssp             ---------CCSSEECCC---CCEECCTTEEECTTSSCEEE
T ss_pred             CcccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCcccc
Confidence            57898 56789999999999999999999999999999964

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=97.84  E-value=6.9e-06  Score=58.21  Aligned_cols=51  Identities=35%  Similarity=0.757  Sum_probs=41.0

Q ss_pred             CcEEEcCCCCCcccccccccc-ccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          24 TVFSKIGDSFKSQDKDECMTN-NGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        24 ~Gy~~~~d~~~C~d~~eC~~~-~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      .||.+.   ..+.+++||... ...|.+.|.|..++|.|.|.+||.+..++++|.
T Consensus       106 ~GF~~~---y~~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~  157 (159)
T 1nzi_A          106 TGFAAY---YVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG  157 (159)
T ss_dssp             CEEEEE---EEEEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             ccceee---eecccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCccc
Confidence            366542   246789999864 357999999999999999999999999988885

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=97.80  E-value=2e-05  Score=54.79  Aligned_cols=40  Identities=20%  Similarity=0.532  Sum_probs=33.2

Q ss_pred             cEEEcCCCCCcc-ccccccccccCcccccccCCCceEEEecCCee
Q psy2974          25 VFSKIGDSFKSQ-DKDECMTNNGGCQHECRNTIGSYICSCHNGYT   68 (186)
Q Consensus        25 Gy~~~~d~~~C~-d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~   68 (186)
                      ||.    +..|+ ++++|...+....+.|+++.++|.|.|++||.
T Consensus        87 G~~----G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~  127 (143)
T 4d90_A           87 GFN----GIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFM  127 (143)
T ss_dssp             TEE----STTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCB
T ss_pred             CCc----CCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCc
Confidence            785    88897 99999865433457999999999999999997

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=97.79  E-value=2.5e-06  Score=62.72  Aligned_cols=73  Identities=27%  Similarity=0.655  Sum_probs=24.3

Q ss_pred             CCccccccccccccCcc--cccccCCCceEEEecCCeeeeccccccc--------c--CCcceeecCCCCcccCCCCCCC
Q psy2974          33 FKSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCK--------E--GGCKYEITAPNGVIKTPNHPDY  100 (186)
Q Consensus        33 ~~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~--------~--~~C~~~~~~~~G~i~sp~~p~~  100 (186)
                      ..|.|+++|...  +|.  +.|++..++|.|.|++||.    +..|.        .  ..|...+.+..|.+.+.+.+++
T Consensus        37 ~~c~dideC~~~--pC~ngg~C~n~~g~y~C~C~~Gf~----G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy  110 (195)
T 1nfu_B           37 NKYKDGDQCETS--PCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGY  110 (195)
T ss_dssp             --------------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTE
T ss_pred             ccCCCCcccCCC--CCCCCCEeECCCCCeeEeCCCCce----eccccccccccccCCCCCCCCEeECCCCCeEEECCCCc
Confidence            469999999864  465  5999999999999999997    33443        2  3466677788899999998887


Q ss_pred             C--CCCCceEEEE
Q psy2974         101 Y--PSKRECIWHF  111 (186)
Q Consensus       101 y--~~~~~C~w~i  111 (186)
                      .  .....|...+
T Consensus       111 ~l~~dG~~C~~~~  123 (195)
T 1nfu_B          111 TLADNGKACIPTG  123 (195)
T ss_dssp             EECTTSSCEEESS
T ss_pred             eeCCCCCccccCC
Confidence            6  4566787654

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=97.77  E-value=1.6e-05  Score=42.76  Aligned_cols=36  Identities=36%  Similarity=0.829  Sum_probs=27.7

Q ss_pred             ccccccccccCcccccccCCCceEEEecCCeeeecccccc
Q psy2974          37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC   76 (186)
Q Consensus        37 d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C   76 (186)
                      |+++|...+....+.|++..++|.|.|++||.    +..|
T Consensus         2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~----G~~C   37 (39)
T 1edm_B            2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFE----GKNC   37 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCC----STTS
T ss_pred             ccccCCCCCCCCCCEeEcCCCceEeECCCCCc----CCcc
Confidence            67888764433346899999999999999996    5555

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=97.76  E-value=1.3e-05  Score=55.91  Aligned_cols=72  Identities=28%  Similarity=0.679  Sum_probs=51.8

Q ss_pred             CccccccccccccCcc--cccccCCCceEEEecCCeeeeccccccc------------cCCcceeecCCCC-cccCCCCC
Q psy2974          34 KSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCK------------EGGCKYEITAPNG-VIKTPNHP   98 (186)
Q Consensus        34 ~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~------------~~~C~~~~~~~~G-~i~sp~~p   98 (186)
                      .|.|+++|...  +|.  +.|+++.++|.|.|++||.    +..|.            .+.|.+.+.+..| .+.+.+.+
T Consensus        43 ~c~did~C~~~--pC~n~g~C~~~~g~y~C~C~~G~~----G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~  116 (142)
T 2c4f_L           43 SYSDGDQCASS--PCQNGGSCKDQLQSYICFCLPAFE----GRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHE  116 (142)
T ss_dssp             HHTTCCGGGGC--CCCTTCEEEEETTEEEEECCTTEE----STTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCT
T ss_pred             cCCccCcCcCC--CcCCCCEEeCCCCCEEeeCCCCcc----CCccccCccccccccCCCCCccCEeECCCCCCEEEECCC
Confidence            57899999864  465  4899999999999999996    44443            2334446777777 88888888


Q ss_pred             CCC--CCCCceEEEE
Q psy2974          99 DYY--PSKRECIWHF  111 (186)
Q Consensus        99 ~~y--~~~~~C~w~i  111 (186)
                      ++.  .....|...+
T Consensus       117 Gy~l~~dG~~C~~~~  131 (142)
T 2c4f_L          117 GYSLLADGVSCTPTV  131 (142)
T ss_dssp             TEEECTTSSCEEESS
T ss_pred             CceECCCCCCCCCCC
Confidence            765  3455666433

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.75  E-value=2.1e-05  Score=69.37  Aligned_cols=64  Identities=28%  Similarity=0.654  Sum_probs=53.3

Q ss_pred             ccccccccccCcccccccCCCceEEEecCCeeeeccccccc-------cCCcceeecCCCCcccCCCCCCCC
Q psy2974          37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK-------EGGCKYEITAPNGVIKTPNHPDYY  101 (186)
Q Consensus        37 d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~-------~~~C~~~~~~~~G~i~sp~~p~~y  101 (186)
                      +++||...++.|.+.|.+++++|.|.|++||.+ .+++.|.       +..|.+.+.+..|.+.+.+.+++.
T Consensus       311 ~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~~~~~C~~~C~n~~gsy~C~C~~Gy~  381 (791)
T 3m0c_C          311 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQ  381 (791)
T ss_dssp             SCCSTTTGGGGCSSEEEECSBSEEEECCTTCEE-ETTTEEECCCCCSSSSSCTTTCCBCSSCBCCCCCSSEE
T ss_pred             ccccccccccCccccccCCCCCcccCCCCCCcc-CCCCccccCcccCCCCCCCCeeecCCCCceeecCCCCE
Confidence            467888777789999999999999999999988 5566775       245777788899999999998875

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.70  E-value=2.1e-05  Score=68.50  Aligned_cols=64  Identities=28%  Similarity=0.654  Sum_probs=53.4

Q ss_pred             ccccccccccCcccccccCCCceEEEecCCeeeeccccccc-------cCCcceeecCCCCcccCCCCCCCC
Q psy2974          37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK-------EGGCKYEITAPNGVIKTPNHPDYY  101 (186)
Q Consensus        37 d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~-------~~~C~~~~~~~~G~i~sp~~p~~y  101 (186)
                      +++||...++.|.+.|.+++++|.|.|++||.+ .+++.|.       ...|.+.+.+..|.+.+.+.+++.
T Consensus       293 ~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~  363 (699)
T 1n7d_A          293 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQ  363 (699)
T ss_dssp             CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSSSSSCTTTCCBCSSCBCCCCCSSCB
T ss_pred             ccccccccccCcCCCcccCCCCcEEeCCCCeEc-CCCCcccCccccCCCCccccccccCCCCeeeeeecccc
Confidence            578898877789999999999999999999998 4566664       245777788889999999888875

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=97.68  E-value=3.3e-06  Score=60.23  Aligned_cols=97  Identities=20%  Similarity=0.301  Sum_probs=58.4

Q ss_pred             CCCcc-CcCCCCCCCCCCCCCC--------cEEEcCCCCCcccccc--ccccccCc----ccccccCCC----ceEEEec
Q psy2974           4 LDPRI-EDKCNNCNESPHDTLT--------VFSKIGDSFKSQDKDE--CMTNNGGC----QHECRNTIG----SYICSCH   64 (186)
Q Consensus         4 ~~~~~-~~~C~~c~~~~~~~~~--------Gy~~~~d~~~C~d~~e--C~~~~~~C----~~~C~n~~g----~~~C~C~   64 (186)
                      +|++. ...| . ++.|+++.+        ||.+.++++.|+++++  |......|    .+.|++..+    +|.|.|+
T Consensus         3 ideC~~~~~C-~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~   80 (162)
T 1uzk_A            3 VNECLDPTTC-I-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCS   80 (162)
T ss_dssp             CCGGGSTTSS-B-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTT
T ss_pred             cccCCCCCCC-C-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCC
Confidence            56643 3456 2 566666654        8999999999999988  87644333    457777666    5666666


Q ss_pred             CCee---------------------------eeccccc------ccc--CCcc-eeecCCCCcccCCCCCCCCC
Q psy2974          65 NGYT---------------------------LLENGHD------CKE--GGCK-YEITAPNGVIKTPNHPDYYP  102 (186)
Q Consensus        65 ~G~~---------------------------l~~~~~~------C~~--~~C~-~~~~~~~G~i~sp~~p~~y~  102 (186)
                      +||.                           ....+..      |..  ..|. +.+++..|.+.+.+.+++..
T Consensus        81 ~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g  154 (162)
T 1uzk_A           81 LGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYL  154 (162)
T ss_dssp             TCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCB
T ss_pred             CCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccC
Confidence            6554                           3322222      321  2364 36777888888888777754

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=97.59  E-value=0.0001  Score=50.74  Aligned_cols=64  Identities=23%  Similarity=0.642  Sum_probs=43.8

Q ss_pred             CCccCcCCCCCCCCCCCCCC--------cEEEcCCCCCcc-ccccccccccCcccccccCCCceEEEecCCeeeeccccc
Q psy2974           5 DPRIEDKCNNCNESPHDTLT--------VFSKIGDSFKSQ-DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHD   75 (186)
Q Consensus         5 ~~~~~~~C~~c~~~~~~~~~--------Gy~~~~d~~~C~-d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~   75 (186)
                      |+.....|.+ .+.|+++.+        ||.    +..|+ ++++|...+....+.|++..++|.|.|++||.    +..
T Consensus        46 ~~C~~~~C~~-~~~C~~~~g~~~C~C~~G~~----G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~----G~~  116 (135)
T 2vj3_A           46 NECVSNPCQN-DATCLDQIGEFQCICMPGYE----GVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFT----GHL  116 (135)
T ss_dssp             CTTTTCCCCS-SCEEEECSSCEEEECCTTEE----SSSSCEECCTTTTCCSTTTCEEEECSSCEEEECCTTEE----SSS
T ss_pred             ccCCCCCCCC-CCEEeCCCCCceeeCCCCCc----CCcceecCCcccCCCcCCCCEeECCCCCeEEECCCCCc----CCc
Confidence            4444444532 455555543        776    77885 78999864322346899999999999999997    556


Q ss_pred             cc
Q psy2974          76 CK   77 (186)
Q Consensus        76 C~   77 (186)
                      |.
T Consensus       117 C~  118 (135)
T 2vj3_A          117 CQ  118 (135)
T ss_dssp             SC
T ss_pred             cC
Confidence            64

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=97.56  E-value=4.2e-05  Score=55.63  Aligned_cols=46  Identities=24%  Similarity=0.547  Sum_probs=37.7

Q ss_pred             cEEEcC-CCCCcccc--ccccccccCc---ccccccCCCceEEEecCCeeeeccc
Q psy2974          25 VFSKIG-DSFKSQDK--DECMTNNGGC---QHECRNTIGSYICSCHNGYTLLENG   73 (186)
Q Consensus        25 Gy~~~~-d~~~C~d~--~eC~~~~~~C---~~~C~n~~g~~~C~C~~G~~l~~~~   73 (186)
                      ||.+.+ ++..|+++  ++|..   .|   .+.|+++.++|.|.|++||......
T Consensus       123 Gy~g~~~~~~~C~~~~~~~C~~---~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~  174 (186)
T 1z1y_A          123 GXVPNPEDEXXCTXTGETACQL---XCNTDNEVCXNVEGVYXCQCMEGFTFDXEX  174 (186)
T ss_dssp             EEEEETTTTTEEEEEECCCCCC---CCCTTTEEEEEETTEEEEEECTTCEEETTT
T ss_pred             CCcccCCCCCcceEcCCCcccc---cccccCcceecCCCCeeeECCCCCccCccc
Confidence            888766 77899986  78974   56   5799999999999999999865443

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=97.55  E-value=6.7e-05  Score=43.52  Aligned_cols=38  Identities=26%  Similarity=0.505  Sum_probs=28.6

Q ss_pred             cccccccccccCccccc-----ccCCCceEEEecCCeeeeccccccc
Q psy2974          36 QDKDECMTNNGGCQHEC-----RNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        36 ~d~~eC~~~~~~C~~~C-----~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      .+++||...+....++|     .+..++|.|.|++||.    +..|+
T Consensus         6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE   48 (55)
T 3u7u_G            6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQ   48 (55)
T ss_dssp             EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSC
T ss_pred             ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcC
Confidence            57899988654456799     4567899999999997    76775

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=97.55  E-value=9.3e-06  Score=56.14  Aligned_cols=77  Identities=25%  Similarity=0.528  Sum_probs=22.6

Q ss_pred             CCCccccccccccccCcc--cccccCCCceEEEecCCeeeec--c-c-ccccc--CCcceeecCCCCcccCCCCCCCC--
Q psy2974          32 SFKSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLE--N-G-HDCKE--GGCKYEITAPNGVIKTPNHPDYY--  101 (186)
Q Consensus        32 ~~~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~--~-~-~~C~~--~~C~~~~~~~~G~i~sp~~p~~y--  101 (186)
                      ...|.++++|...  .|.  +.|++..++|.|.|++||....  + . ..|..  ..|...+.+..|.+.+.+.+++.  
T Consensus        36 ~~~c~d~d~C~~~--pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~  113 (134)
T 2vh0_B           36 WNKYKDGDQCETS--PCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLA  113 (134)
T ss_dssp             -----------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEEC
T ss_pred             cccCCCcCcCCCC--CCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEEC
Confidence            3469999999864  465  5899999999999999997221  0 0 12432  23555677777888888888875  


Q ss_pred             CCCCceEEE
Q psy2974         102 PSKRECIWH  110 (186)
Q Consensus       102 ~~~~~C~w~  110 (186)
                      .....|...
T Consensus       114 ~~g~~C~~~  122 (134)
T 2vh0_B          114 DNGKACIPT  122 (134)
T ss_dssp             TTSSCEEES
T ss_pred             CCCCccCcC
Confidence            345566543

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=97.55  E-value=0.00012  Score=62.85  Aligned_cols=45  Identities=24%  Similarity=0.608  Sum_probs=36.8

Q ss_pred             CCCCccccccccccccCcc--cccccCC----CceEEEecCCeeeeccccccc
Q psy2974          31 DSFKSQDKDECMTNNGGCQ--HECRNTI----GSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        31 d~~~C~d~~eC~~~~~~C~--~~C~n~~----g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      +++.|++++||...+..|.  +.|+++.    ++|.|.|++||..  ++..|.
T Consensus        95 dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G--dG~~Ce  145 (634)
T 1yo8_A           95 EKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG--DGLICG  145 (634)
T ss_dssp             CCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE--SSSSEE
T ss_pred             CCCcccccccccCCCcccccCccccccccccccceeeeccCCccc--cCcccc
Confidence            4567999999997666786  6899998    9999999999973  345664

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.38  E-value=9.2e-05  Score=58.03  Aligned_cols=42  Identities=29%  Similarity=0.682  Sum_probs=36.7

Q ss_pred             ccccccccc---ccCcccccccCC------CceEEEecCCeeeeccccccc
Q psy2974          36 QDKDECMTN---NGGCQHECRNTI------GSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        36 ~d~~eC~~~---~~~C~~~C~n~~------g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      .+.++|...   ++.|+|.|.+.+      ++|.|.|+.||.|..++++|.
T Consensus       265 ~~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~  315 (316)
T 1ijq_A          265 RGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL  315 (316)
T ss_dssp             CCCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             cccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence            367889876   788999999875      689999999999999999985

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.35  E-value=7.1e-05  Score=44.39  Aligned_cols=35  Identities=34%  Similarity=0.794  Sum_probs=27.8

Q ss_pred             CccccccccccccCcc--cccccCCCceEEEecCCee
Q psy2974          34 KSQDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYT   68 (186)
Q Consensus        34 ~C~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~   68 (186)
                      .|+++++|...+....  ++|++..++|.|.|++||.
T Consensus         7 ~~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~   43 (61)
T 2k2s_B            7 LSETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYR   43 (61)
T ss_dssp             CTTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEE
T ss_pred             hcCCCCcCcCCCCcCCCccccccCCCceEeECCCCCc
Confidence            4778899986542223  5899999999999999996

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.34  E-value=5.4e-05  Score=58.48  Aligned_cols=41  Identities=32%  Similarity=0.805  Sum_probs=31.2

Q ss_pred             cccccccccccCcc--cccccCCCceEEEecCCeeeecccccccc
Q psy2974          36 QDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        36 ~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      +|+|||....+.|.  ..|.|+.|+|.|.|.+||.  .++..|.+
T Consensus         3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d   45 (285)
T 1gl4_A            3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVA   45 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEE
T ss_pred             ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCC
Confidence            47899987667886  5799999999999999997  45778863

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=97.33  E-value=0.00018  Score=49.77  Aligned_cols=66  Identities=20%  Similarity=0.411  Sum_probs=43.1

Q ss_pred             ccccccccccCcccccc-------cCCCceEEEecCCeeeeccccccc-------cCCcc--eeecCCCCcccCCCCCCC
Q psy2974          37 DKDECMTNNGGCQHECR-------NTIGSYICSCHNGYTLLENGHDCK-------EGGCK--YEITAPNGVIKTPNHPDY  100 (186)
Q Consensus        37 d~~eC~~~~~~C~~~C~-------n~~g~~~C~C~~G~~l~~~~~~C~-------~~~C~--~~~~~~~G~i~sp~~p~~  100 (186)
                      ++++|...+....+.|+       ++.++|.|.|++||.    +..|.       ...|.  +.+.+..|.+.+.+.+++
T Consensus        51 ~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~----G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~  126 (143)
T 4d90_A           51 SAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFN----GIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEF  126 (143)
T ss_dssp             CCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEE----STTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTC
T ss_pred             cCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCc----CCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCC
Confidence            45666553322235888       778899999999996    44453       23342  456667788888888877


Q ss_pred             CCCCCc
Q psy2974         101 YPSKRE  106 (186)
Q Consensus       101 y~~~~~  106 (186)
                      ...+..
T Consensus       127 ~G~~c~  132 (143)
T 4d90_A          127 MGRNCQ  132 (143)
T ss_dssp             BSTTSC
T ss_pred             ccCCce
Confidence            665443

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.25  E-value=0.00012  Score=62.99  Aligned_cols=42  Identities=31%  Similarity=0.847  Sum_probs=38.9

Q ss_pred             ccccccccccCcccccccCC-CceEEEecCCeeeecccccccc
Q psy2974          37 DKDECMTNNGGCQHECRNTI-GSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        37 d~~eC~~~~~~C~~~C~n~~-g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      ++++|...++.|+|.|.+.+ ++|.|.|+.||.+..++++|.+
T Consensus       264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~  306 (628)
T 4a0p_A          264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA  306 (628)
T ss_dssp             CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred             cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence            68999988889999999999 9999999999999999999974

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.18  E-value=0.0002  Score=56.34  Aligned_cols=43  Identities=44%  Similarity=0.964  Sum_probs=37.2

Q ss_pred             ccccccccccCcccccccCCC--ceEEEecCCeeeeccccccccC
Q psy2974          37 DKDECMTNNGGCQHECRNTIG--SYICSCHNGYTLLENGHDCKEG   79 (186)
Q Consensus        37 d~~eC~~~~~~C~~~C~n~~g--~~~C~C~~G~~l~~~~~~C~~~   79 (186)
                      ..+.|...++.|+|.|...++  +|.|.|+.||.|..++++|.++
T Consensus       266 ~~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~  310 (318)
T 3sov_A          266 ATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDG  310 (318)
T ss_dssp             CCCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred             cccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence            368898878899999998876  7999999999999999999754

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.18  E-value=0.0003  Score=40.34  Aligned_cols=37  Identities=32%  Similarity=0.891  Sum_probs=28.3

Q ss_pred             cccccccc-ccCcc--cccc--cCCCceEEEecCCeeeeccccccc
Q psy2974          37 DKDECMTN-NGGCQ--HECR--NTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        37 d~~eC~~~-~~~C~--~~C~--n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      ++++|... ..+|.  ++|+  +..++|.|.|++||.    +..|+
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce   43 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQ   43 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCC
Confidence            57888763 12464  6898  889999999999996    66664

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=97.16  E-value=0.00016  Score=62.03  Aligned_cols=41  Identities=29%  Similarity=0.772  Sum_probs=38.1

Q ss_pred             ccccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        37 d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      ..++|...++.|+|.|.+.+++|.|.|+.||.|..++++|.
T Consensus       577 ~~~~C~~~ng~C~~~C~~~~~~~~C~C~~g~~l~~d~~~C~  617 (619)
T 3s94_A          577 GSNPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCI  617 (619)
T ss_dssp             CCCGGGSGGGGCSSEEEEETTEEEEECCTTCEECSSTTCEE
T ss_pred             ccccCCCCCCChhHhhccCCCCeEEECCCCCEECCCCCcCC
Confidence            57899988889999999999999999999999999999986

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=97.07  E-value=0.00021  Score=45.88  Aligned_cols=50  Identities=12%  Similarity=0.143  Sum_probs=25.0

Q ss_pred             cccCCCceEEEecCCeeeec--cccccccCCcc--eeecCCC--CcccCCCCCCCC
Q psy2974          52 CRNTIGSYICSCHNGYTLLE--NGHDCKEGGCK--YEITAPN--GVIKTPNHPDYY  101 (186)
Q Consensus        52 C~n~~g~~~C~C~~G~~l~~--~~~~C~~~~C~--~~~~~~~--G~i~sp~~p~~y  101 (186)
                      |.+..++|.|.|++||..-.  +...|....|.  +.+.+..  +.+.+.+.+++.
T Consensus        25 C~n~~~~y~C~C~~G~~~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~   80 (91)
T 1tpg_A           25 VLRSNRVEYCWCNSGRAQCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFA   80 (91)
T ss_dssp             CSSSSCEEEEECSSSCCBCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCB
T ss_pred             cccCCCCcEeECCCCCcccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCc
Confidence            55666666777777765221  22345444442  3344333  555555555543

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=97.06  E-value=0.00032  Score=48.90  Aligned_cols=40  Identities=38%  Similarity=0.750  Sum_probs=33.1

Q ss_pred             cccccccccccCcc-cccccCCCceEEEecCCeeeeccccccc
Q psy2974          36 QDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        36 ~d~~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      .|++||...  +|. +.|++++++|.|.|++||.+...+..|.
T Consensus         2 ~dideC~~~--pC~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~   42 (147)
T 2w86_A            2 ADIDECESS--PCINGVCKNSPGSFICECSSESTLDPTKTICI   42 (147)
T ss_dssp             CCCCGGGGC--CSBTSEEEEETTEEEEECCTTEEECTTSSBEE
T ss_pred             CcCccCcCC--CCCCCEeECCCCCEEeECCCCcccCCCCCeec
Confidence            478999864  475 5999999999999999999876666665

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=96.90  E-value=0.00062  Score=43.61  Aligned_cols=40  Identities=18%  Similarity=0.674  Sum_probs=31.0

Q ss_pred             Ccc--ccccccccccCcccccccCC--CceEEEecCCeeeeccccccc
Q psy2974          34 KSQ--DKDECMTNNGGCQHECRNTI--GSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        34 ~C~--d~~eC~~~~~~C~~~C~n~~--g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      .|+  ++++|...+....+.|++..  ++|.|.|++||.    +..|.
T Consensus        42 ~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce   85 (91)
T 1tpg_A           42 QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFA----GKSCE   85 (91)
T ss_dssp             BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred             ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCc----CCcCC
Confidence            685  78999875422246899987  999999999996    66674

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=96.87  E-value=0.0005  Score=53.92  Aligned_cols=66  Identities=18%  Similarity=0.434  Sum_probs=44.2

Q ss_pred             cccccccccccCcccccccCCCceEEEecCCeeee---cccccccc---CCcceeecCCCCcccCCCCCCCC
Q psy2974          36 QDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLL---ENGHDCKE---GGCKYEITAPNGVIKTPNHPDYY  101 (186)
Q Consensus        36 ~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~---~~~~~C~~---~~C~~~~~~~~G~i~sp~~p~~y  101 (186)
                      .|+++|...+....+.|.+..++|.|.|++||...   .+...|..   ..|...+.+..|.+.+.+.+++.
T Consensus         3 ~d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~   74 (317)
T 3h5c_B            3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYR   74 (317)
T ss_dssp             ---CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEE
T ss_pred             ccCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcCccccCCCeeEEecccccc
Confidence            46788987553234689999999999999999721   02233433   45777788888888887776654

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=96.55  E-value=0.0014  Score=36.33  Aligned_cols=37  Identities=32%  Similarity=0.837  Sum_probs=25.5

Q ss_pred             cccccccc-ccCcc-cccccCC--CceEEEecCCeeeeccccccc
Q psy2974          37 DKDECMTN-NGGCQ-HECRNTI--GSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        37 d~~eC~~~-~~~C~-~~C~n~~--g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      ++++|... ..+|. ++|....  ++|.|.|++||.    +..|+
T Consensus         2 ~i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce   42 (46)
T 1k36_A            2 SITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYT----GVRCE   42 (46)
T ss_dssp             CEECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred             ccccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCc----cCCCC
Confidence            46777651 12353 5888654  689999999997    66664

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=96.47  E-value=0.0027  Score=34.91  Aligned_cols=24  Identities=33%  Similarity=0.891  Sum_probs=19.8

Q ss_pred             cccc--cCCCceEEEecCCeeeeccccccc
Q psy2974          50 HECR--NTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        50 ~~C~--n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      +.|+  +..++|.|.|++||.    +..|.
T Consensus        15 g~C~~~~~~~~~~C~C~~G~~----G~~Ce   40 (45)
T 1a3p_A           15 GVXMHIESLDSYTCNCVIGYS----GDRCQ   40 (45)
T ss_dssp             CEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred             CEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence            5787  788999999999997    66664

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=96.28  E-value=0.0036  Score=35.46  Aligned_cols=34  Identities=9%  Similarity=0.042  Sum_probs=25.5

Q ss_pred             CcCCCCCCCCCCCCCC-cEEEcCCCCCcccccccc
Q psy2974           9 EDKCNNCNESPHDTLT-VFSKIGDSFKSQDKDECM   42 (186)
Q Consensus         9 ~~~C~~c~~~~~~~~~-Gy~~~~d~~~C~d~~eC~   42 (186)
                      ...|.+..+++.+.+. ||.|.+|+++|.+++||.
T Consensus         9 ~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~p   43 (51)
T 1kig_L            9 DQFCREERSEVRCSCAHGYVLGDDSKSCVSTERFP   43 (51)
T ss_dssp             SSCCCEETTEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred             CCEeEcCCCCeEEeCCCCcEECCCCCccccCCccc
Confidence            3456555555666544 999999999999999974

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=95.94  E-value=0.0038  Score=49.51  Aligned_cols=41  Identities=39%  Similarity=0.896  Sum_probs=36.0

Q ss_pred             ccccccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974          37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        37 d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      ..+.|...++.|+|.|...++++.|.|+.||. ..++++|.+
T Consensus       303 ~~n~C~~~~g~C~~lCl~~~~~~~C~C~~g~~-~~d~~~C~~  343 (349)
T 3v64_C          303 GKNRCGDNNGGCTHLCLPSGQNYTCACPTGFR-KINSHACAL  343 (349)
T ss_dssp             CCCTTTTGGGGCSSEEECCTTSCEEECCTTEE-EETTTEEEE
T ss_pred             ccCcccCCCCCcccEeecCCCCCeeECCCCCc-CCCCCcccc
Confidence            35778887789999999999999999999999 888999963

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=95.89  E-value=0.0052  Score=43.81  Aligned_cols=67  Identities=13%  Similarity=0.342  Sum_probs=32.9

Q ss_pred             cEEEcCCCCCccccccccccccCcc-cccccCCCceEEEecCCeeeec---ccccccc-CCcc--eeecCC-CCcccCCC
Q psy2974          25 VFSKIGDSFKSQDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLE---NGHDCKE-GGCK--YEITAP-NGVIKTPN   96 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~~---~~~~C~~-~~C~--~~~~~~-~G~i~sp~   96 (186)
                      ||.    +..|+   +|...+ .|. +.|+   ++|.|.|++||....   +...|.. ..|.  +.+.+. .+.+.+.+
T Consensus        90 G~~----G~~C~---~C~~~~-~C~~g~C~---~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C  158 (169)
T 2vj2_A           90 GWQ----GLYCD---KCIPHP-GCVHGICN---EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSC  158 (169)
T ss_dssp             TEE----SSSSC---EECCCT-TCSSEECS---STTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEEC
T ss_pred             CCC----CCCcc---cCCCCC-CCCCCCcC---CCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeEC
Confidence            776    55563   344322 243 2554   567777777776221   1122322 3343  344443 45566666


Q ss_pred             CCCCCC
Q psy2974          97 HPDYYP  102 (186)
Q Consensus        97 ~p~~y~  102 (186)
                      .+++..
T Consensus       159 ~~G~~G  164 (169)
T 2vj2_A          159 PEGYSG  164 (169)
T ss_dssp             CTTCCS
T ss_pred             CCCCcC
Confidence            666543

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=95.86  E-value=0.0026  Score=36.59  Aligned_cols=19  Identities=0%  Similarity=-0.116  Sum_probs=17.4

Q ss_pred             cEEEcCCCCCccccccccc
Q psy2974          25 VFSKIGDSFKSQDKDECMT   43 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~~   43 (186)
                      ||.|..|++.|.+++||.-
T Consensus        29 Gy~L~~d~~~C~didec~c   47 (55)
T 2jkh_L           29 GYTLADNGKACIPTGPYPC   47 (55)
T ss_dssp             TEEECTTSSCEEESSSSCT
T ss_pred             CCEECCCCCeeccCccccC
Confidence            9999999999999999864

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=95.83  E-value=0.0047  Score=52.95  Aligned_cols=42  Identities=43%  Similarity=0.949  Sum_probs=37.0

Q ss_pred             ccccccccccCcccccccCC--CceEEEecCCeeeecccccccc
Q psy2974          37 DKDECMTNNGGCQHECRNTI--GSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        37 d~~eC~~~~~~C~~~C~n~~--g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      ..++|...++.|+|.|...+  ++|.|.|+.||.+..++++|..
T Consensus       271 ~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~  314 (619)
T 3s94_A          271 ATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD  314 (619)
T ss_dssp             CCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCS
T ss_pred             ccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCC
Confidence            46889888889999999876  4799999999999999999975

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=95.62  E-value=0.0051  Score=36.37  Aligned_cols=35  Identities=29%  Similarity=0.568  Sum_probs=24.5

Q ss_pred             ccccccccCccccccc-----CCCceEEEecCCeeeeccccccc
Q psy2974          39 DECMTNNGGCQHECRN-----TIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        39 ~eC~~~~~~C~~~C~n-----~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      ++|...+....++|++     ..++|.|.|++||.    +..|.
T Consensus         7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce   46 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCT   46 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred             CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccC
Confidence            5565443222468886     67899999999997    66774

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=95.45  E-value=0.0086  Score=34.97  Aligned_cols=27  Identities=4%  Similarity=-0.057  Sum_probs=22.3

Q ss_pred             cEEEcCCCCCccccccccccccCcccccccCC
Q psy2974          25 VFSKIGDSFKSQDKDECMTNNGGCQHECRNTI   56 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~~~~~~C~~~C~n~~   56 (186)
                      ||.|.+|++.|.|+++     .+|.+.|+|..
T Consensus        28 Gy~L~~D~~tC~d~~~-----~pC~~~c~n~~   54 (59)
T 2wph_E           28 GYRLAENQKSCEPAVP-----FPCGRVSVSQT   54 (59)
T ss_dssp             TEEECTTSSCEEESSS-----SCTTCCCSCCC
T ss_pred             CcEECCCCCcccCCCC-----CCCCCcccccc
Confidence            9999999999998764     46888888754

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=95.22  E-value=0.0062  Score=34.75  Aligned_cols=18  Identities=17%  Similarity=0.146  Sum_probs=16.9

Q ss_pred             cEEEcCCCCCcccccccc
Q psy2974          25 VFSKIGDSFKSQDKDECM   42 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~   42 (186)
                      ||.|.+|+++|.+++||.
T Consensus        28 Gy~L~~Dg~tC~d~dec~   45 (53)
T 2bz6_L           28 GYSLLADGVSCTPTVEYP   45 (53)
T ss_dssp             TEEECTTSSCEEECSSSC
T ss_pred             CCEECCCCCcccCCcccc
Confidence            999999999999999985

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=94.40  E-value=0.022  Score=48.86  Aligned_cols=41  Identities=34%  Similarity=0.758  Sum_probs=34.3

Q ss_pred             ccccccccccCcccccccCC-CceEEEecCCeeeeccccccc
Q psy2974          37 DKDECMTNNGGCQHECRNTI-GSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        37 d~~eC~~~~~~C~~~C~n~~-g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      ..+.|...++.|+|.|...+ +.+.|.|+.||.|..++++|.
T Consensus       578 ~~n~c~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~~~  619 (628)
T 4a0p_A          578 RQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCG  619 (628)
T ss_dssp             HHSTTTTGGGGCSSEEEECTTSCEEEECCTTEEECTTSSCEE
T ss_pred             ccccCCCCCCCcchhcccCCCCCeeeeCCCCCEECCCCCcCC
Confidence            34678877889999998765 468999999999999998874

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=93.54  E-value=0.015  Score=35.11  Aligned_cols=19  Identities=16%  Similarity=0.130  Sum_probs=17.4

Q ss_pred             cEEEcCCCCCccccccccc
Q psy2974          25 VFSKIGDSFKSQDKDECMT   43 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC~~   43 (186)
                      ||.|.+|+++|.+++||.-
T Consensus        34 Gy~L~~D~~tC~d~dec~C   52 (69)
T 1kli_L           34 GYSLLADGVSCTPTVEYPC   52 (69)
T ss_dssp             TEEECTTSSCEEECSSSCT
T ss_pred             CCeECCCCCcccCcccccC
Confidence            9999999999999999864

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=93.45  E-value=0.05  Score=37.97  Aligned_cols=36  Identities=39%  Similarity=0.869  Sum_probs=26.1

Q ss_pred             cccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          38 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        38 ~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      +++|...+....+.|.+..++|.|.|++||.    +..|.
T Consensus       119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce  154 (162)
T 1g1s_A          119 TASCQDMSCSKQGECLETIGNYTCSCYPGFY----GPECE  154 (162)
T ss_dssp             ECCCCTTGGGGSEEEEECSSSEEEEECTTEE----STTSC
T ss_pred             eCCCcCCCCCCCCEEecCCCCceEeCCCCCc----Ccccc
Confidence            4556653322246899999999999999998    56675

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=92.63  E-value=0.19  Score=32.56  Aligned_cols=59  Identities=25%  Similarity=0.384  Sum_probs=43.9

Q ss_pred             ccCcCCCCCCCCCCCCCC---------cEEEcCCCCCcccccc-ccccccCcc--cccccCC-CceEEEecCCee
Q psy2974           7 RIEDKCNNCNESPHDTLT---------VFSKIGDSFKSQDKDE-CMTNNGGCQ--HECRNTI-GSYICSCHNGYT   68 (186)
Q Consensus         7 ~~~~~C~~c~~~~~~~~~---------Gy~~~~d~~~C~d~~e-C~~~~~~C~--~~C~n~~-g~~~C~C~~G~~   68 (186)
                      +....|+. +..|+.+..         ||..  |+..|..++. |..+++.|.  ..|..+. ....|.|..+|.
T Consensus        13 C~~t~Cp~-NA~C~r~~~G~e~CrCl~gY~~--dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           13 CIDTNVPE-NAACYRYLDGTEEWRCLLGFKE--VGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGS   84 (105)
T ss_dssp             CCSSCCCT-TEEEEECTTSCEEEEECTTEEE--CSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred             ecCCCCCC-CCCeEECCCCCEeEEEECCeec--cCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence            44445654 667776433         7875  6888988888 888888995  6888774 788999999964

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=92.08  E-value=0.097  Score=29.65  Aligned_cols=24  Identities=33%  Similarity=0.988  Sum_probs=19.7

Q ss_pred             cccc--cCCCceEEEecCCeeeeccccccc
Q psy2974          50 HECR--NTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        50 ~~C~--n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      ++|.  +..++|.|.|++||.    +..|+
T Consensus        18 G~C~~~~~~~~~~C~C~~Gyt----G~~Ce   43 (53)
T 1nql_B           18 GVCMYIEALDKYACNCVVGYI----GERCQ   43 (53)
T ss_dssp             CEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred             eEEeeecCCCCEEEecCCCCc----CCCCC
Confidence            5787  677899999999997    66664

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=91.89  E-value=0.091  Score=44.42  Aligned_cols=36  Identities=28%  Similarity=0.712  Sum_probs=28.3

Q ss_pred             cccccccccCccccccc-CCCceEEEec-CCeeeeccccccc
Q psy2974          38 KDECMTNNGGCQHECRN-TIGSYICSCH-NGYTLLENGHDCK   77 (186)
Q Consensus        38 ~~eC~~~~~~C~~~C~n-~~g~~~C~C~-~G~~l~~~~~~C~   77 (186)
                      +++|...+....+.|.+ ..++|.|.|+ +||.    |..|+
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce   39 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCT   39 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred             CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCC
Confidence            57788755333579999 8999999999 9997    66774

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=90.64  E-value=0.14  Score=43.62  Aligned_cols=36  Identities=28%  Similarity=0.797  Sum_probs=27.0

Q ss_pred             cccccccccCccccccc-CCCceEEEec-CCeeeeccccccc
Q psy2974          38 KDECMTNNGGCQHECRN-TIGSYICSCH-NGYTLLENGHDCK   77 (186)
Q Consensus        38 ~~eC~~~~~~C~~~C~n-~~g~~~C~C~-~G~~l~~~~~~C~   77 (186)
                      +++|...+....+.|.+ ..++|.|.|+ +||.    +..|+
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce   38 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCT   38 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTC
T ss_pred             CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCC
Confidence            46788765444579995 5589999999 9997    66674

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=88.04  E-value=0.73  Score=29.58  Aligned_cols=42  Identities=24%  Similarity=0.613  Sum_probs=33.2

Q ss_pred             cEEEcCCCCCcccc--ccccccccCcc--cccccCC-----CceEEEecCCee
Q psy2974          25 VFSKIGDSFKSQDK--DECMTNNGGCQ--HECRNTI-----GSYICSCHNGYT   68 (186)
Q Consensus        25 Gy~~~~d~~~C~d~--~eC~~~~~~C~--~~C~n~~-----g~~~C~C~~G~~   68 (186)
                      ||..  |+..|..+  +.|..+++.|.  ..|....     +...|.|.+||.
T Consensus        33 gy~g--dg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C           33 NYKQ--EGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             TEEE--ETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred             Ceec--CCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence            8875  67889887  57998888895  5888664     578999999975

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=87.95  E-value=0.25  Score=27.65  Aligned_cols=24  Identities=29%  Similarity=0.898  Sum_probs=18.2

Q ss_pred             ccccc----CCCceEEEecCCeeeeccccccc
Q psy2974          50 HECRN----TIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        50 ~~C~n----~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      +.|++    ..++|.|.|++||.    +..|+
T Consensus        20 GtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce   47 (52)
T 3ca7_A           20 AHCFAVKIADLPVYSCECAIGFM----GQRCE   47 (52)
T ss_dssp             CEEEEEEETTEEEEEEECCTTEE----STTSC
T ss_pred             CEEecCccCCCCCEEEECCCCCc----CCCCc
Confidence            56775    35689999999997    65664

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=87.68  E-value=0.055  Score=41.37  Aligned_cols=38  Identities=5%  Similarity=-0.011  Sum_probs=30.9

Q ss_pred             CCCCccccccccccccCcccccccCCCceEEEecCCee
Q psy2974          31 DSFKSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYT   68 (186)
Q Consensus        31 d~~~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~   68 (186)
                      .+..|.+.+||...+..-..+|++...+|.|.|++||.
T Consensus        92 ~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~  129 (267)
T 4fbr_A           92 LGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFK  129 (267)
T ss_dssp             CCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEE
T ss_pred             ccCccccccccCCCCCCCCCEEecCCccEEeeCCCCcc
Confidence            36678778888876544457999999999999999998

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=81.80  E-value=0.76  Score=26.37  Aligned_cols=24  Identities=29%  Similarity=0.898  Sum_probs=18.0

Q ss_pred             ccccc----CCCceEEEecCCeeeeccccccc
Q psy2974          50 HECRN----TIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        50 ~~C~n----~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      ++|..    ..++|.|.|++||.    +..|+
T Consensus        20 GtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce   47 (58)
T 3ltf_D           20 AHCFAVKIADLPVYSCECAIGFM----GQRCE   47 (58)
T ss_dssp             CEEEEEEETTEEEEEEEECTTEE----SSSSC
T ss_pred             CEEeCCccCCCCCEEeECCCCCc----cCCCc
Confidence            56762    45678999999997    66674

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	186
d2p3ua1	51	g.3.11.1 (A:87-137) Factor X, N-terminal module {H	2e-13
d1autl2	50	g.3.11.1 (L:97-146) Activated protein c (autoproth	6e-13
d1kigl_	51	g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bo	1e-12
d1i0ua2	41	g.3.11.1 (A:42-82) Low density lipoprotein (LDL) r	1e-12
d3bpse1	40	g.3.11.1 (E:293-332) Low density lipoprotein (LDL)	2e-12
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	6e-12
d1szba2	45	g.3.11.1 (A:124-168) Mannose-binding protein assoc	6e-12
d2bz6l1	53	g.3.11.1 (L:90-142) Coagulation factor VIIa {Human	7e-12
d1nt0a3	45	g.3.11.1 (A:120-164) Mannose-binding protein assoc	1e-11
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	2e-11
d1nzia2	42	g.3.11.1 (A:118-159) Complement C1S component {Hum	2e-11
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	2e-11
d1rfnb_	57	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	2e-11
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	4e-11
d1ijqa2	50	g.3.11.1 (A:643-692) Low density lipoprotein (LDL)	1e-10
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	3e-10
d1nt0a2	114	b.23.1.1 (A:165-278) Mannose-binding protein assoc	9e-10
d1szba1	121	b.23.1.1 (A:3-123) Mannose-binding protein associa	1e-09
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	2e-09
d1nzia1	117	b.23.1.1 (A:1-117) Complement C1S component {Human	2e-09
d2qqma3	108	b.23.1.1 (A:156-263) Mannose-binding protein assoc	2e-09
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	2e-08
d1sfpa_	111	b.23.1.1 (A:) Acidic seminal fluid protein (ASFP)	4e-07
d1sppa_	109	b.23.1.1 (A:) Major seminal plasma glycoprotein PS	5e-07
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	6e-06
d1sppb_	112	b.23.1.1 (B:) Major seminal plasma glycoprotein PS	9e-06
d1gl4a2	40	g.3.11.5 (A:359-398) EGF-like domain of nidogen-1	5e-04
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	0.001
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	0.003

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (144), Expect = 2e-13
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 41 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77
          C  +NG C   C     S +CSC  GYTL +NG  C 
Sbjct: 3  CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACI 39

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (141), Expect = 6e-13
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 41 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
          C  +NGGC H C   +G   CSC  GY L ++   C  
Sbjct: 2  CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP 39

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.9 bits (140), Expect = 1e-12
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 41 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
          C  +NGGC   CR       CSC +GY L ++   C  
Sbjct: 1  CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVS 38

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (138), Expect = 1e-12
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 39 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77
          DEC  +   C   C N  G Y C C  G+ L  +   CK
Sbjct: 2  DEC-QDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK 39

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (138), Expect = 2e-12
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 39 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77
          +EC+ NNGGC H C +    Y C C +G+ L+     C+
Sbjct: 3  NECLDNNGGCSHVCNDLKIGYECLCPDGFQLV-AQRRCE 40

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (134), Expect = 6e-12
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 36 QDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDC 76
          +D DEC    G CQ  +C NT GS+ C C  GY L E+   C
Sbjct: 1  EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (134), Expect = 6e-12
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 3/43 (6%)

Query: 39 DECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKE 78
          DEC    G    C H C N +G + CSC  GY L  N   C E
Sbjct: 2  DECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 44

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (134), Expect = 7e-12
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 41 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE 78
          C+  NGGC+  C +  G    C CH GY+LL +G  C  
Sbjct: 2  CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 40

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.9 bits (132), Expect = 1e-11
 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 39 DECMTNNGG---CQHECRNTIGSYICSCHNGYTLLENGHDCK 77
          DEC T+ G    C H C N +G Y CSC  GY L +N H C 
Sbjct: 2  DECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCS 43

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (130), Expect = 2e-11
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 37 DKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDC 76
          D DEC  +   C+   C NT GSY C C  G+ L  N   C
Sbjct: 1  DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 41

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (130), Expect = 2e-11
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 39 DECMT-NNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 77
          +EC    +  C H C N IG Y CSC   Y L ++  +C 
Sbjct: 1  NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG 40

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (130), Expect = 2e-11
 Identities = 14/40 (35%), Positives = 17/40 (42%)

Query: 37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 76
          D +EC+         C NT GSYIC C   + L      C
Sbjct: 2  DVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGC 41

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (131), Expect = 2e-11
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 41 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE 78
          C   NG C+  C+N+     +CSC  GY L EN   C+ 
Sbjct: 3  CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP 41

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (128), Expect = 4e-11
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 8/49 (16%)

Query: 37 DKDECMTNNGGC--------QHECRNTIGSYICSCHNGYTLLENGHDCK 77
          D DEC + +           QH C N +G Y CSC  GY L E+ H C+
Sbjct: 3  DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 1e-10
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%)

Query: 39 DECMTNNGGCQHEC------RNTIGSYICSCHNGYTLLENGHDC 76
          +    +NGGCQ+ C            + C+C +G  L  +   C
Sbjct: 5  ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 48

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (122), Expect = 3e-10
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLL-ENGHDC 76
          D DEC  N G C   C N  G++ C C     L  + G DC
Sbjct: 1  DIDEC-ENGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 40

>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 114

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.9 bits (123), Expect = 9e-10
 Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 37/106 (34%)

Query: 86  TAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN----------------------- 122
           T  +G + +P +P  YP    C ++     G  I L+                       
Sbjct: 7   TGRSGFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHPEAQCPYDSLKIQ 66

Query: 123 --------------PTDIISISEGLLVRFRSDDTVVGKGFSASYIA 154
                         P  I + S  + + F +D++    G+   Y +
Sbjct: 67  TDKREYGPFCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTS 112

>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 121

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 1e-09
 Identities = 23/113 (20%), Positives = 33/113 (29%), Gaps = 44/113 (38%)

Query: 88  PNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN------------------------- 122
             G + +P  P  Y + +E  W  T  PG+R++L                          
Sbjct: 9   VFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSGAKV 68

Query: 123 -----------------PTDIISISEGLLVRFRSDDTV--VGKGFSASYIAID 156
                                 S+   L + FRSD +      GF A Y A D
Sbjct: 69  LATLCGQESTDTERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAAED 121

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (117), Expect = 2e-09
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 76
          D DEC   +     +C NT GSY C C  GY L   G++C
Sbjct: 4  DMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNEC 41

>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 2e-09
 Identities = 24/111 (21%), Positives = 34/111 (30%), Gaps = 44/111 (39%)

Query: 90  GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN--------------------------- 122
           G I +PN+P  YPS+ E  W      G+ I L                            
Sbjct: 6   GEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEG 65

Query: 123 ---------------PTDIISISEGLLVRFRSDDTVVGK--GFSASYIAID 156
                            +       L V F+SD +   +  GF+A Y+A D
Sbjct: 66  RLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATD 116

>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (120), Expect = 2e-09
 Identities = 24/107 (22%), Positives = 33/107 (30%), Gaps = 44/107 (41%)

Query: 90  GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLN--------------------------- 122
           GVIK+P  P+ YP+  EC +         I L                            
Sbjct: 1   GVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWD 60

Query: 123 -----------------PTDIISISEGLLVRFRSDDTVVGKGFSASY 152
                            P  I S S  L + F +D  +  +GFSA+Y
Sbjct: 61  GFPDVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANY 107

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (110), Expect = 2e-08
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 37 DKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTL-LENGHDC 76
          D DEC  +   C   +C NT G + C C  GY        +C
Sbjct: 2  DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC 43

>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow (Bos taurus) [TaxId: 9913]} Length = 111

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Acidic seminal fluid protein (ASFP)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.6 bits (104), Expect = 4e-07
 Identities = 14/111 (12%), Positives = 28/111 (25%), Gaps = 37/111 (33%)

Query: 77  KEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT------------ 124
           +   C   +   +GVI T      Y  K  C+W     P + ++++              
Sbjct: 3   RNTNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQLNCNKESLE 57

Query: 125 --------------------DIISISEGLLVRFRSDDTVVGKGFSASYIAI 155
                               D  S    + V++  +       +   Y   
Sbjct: 58  IIDGLPGSPVLGKICEGSLMDYRSSGSIMTVKYIREPEHPASFYEVLYFQD 108

>d1sppa_ b.23.1.1 (A:) Major seminal plasma glycoprotein PSP-I {Pig (Sus scrofa) [TaxId: 9823]} Length = 109

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Major seminal plasma glycoprotein PSP-I
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 44.2 bits (103), Expect = 5e-07
 Identities = 14/105 (13%), Positives = 30/105 (28%), Gaps = 36/105 (34%)

Query: 81  CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNP----------------- 123
           C   +T   G I T   P       EC+W     P +++ ++                  
Sbjct: 6   CGGRLTDDYGTIFTYKGPK-----TECVWTLQVDPKYKLLVSIPTLNLTCGKEYVEVLEG 60

Query: 124 --------------TDIISISEGLLVRFRSDDTVVGKGFSASYIA 154
                         + +   S G+ V+++ D       +   ++ 
Sbjct: 61  APGSKSLGKFCEGLSILNRGSSGMTVKYKRDSGHPASPYEIIFLR 105

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 6e-06
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 6/43 (13%)

Query: 36 QDKDECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDC 76
          QD DEC      C+H  +C NT+GS+ C C  GYT    G  C
Sbjct: 1  QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRC 39

>d1sppb_ b.23.1.1 (B:) Major seminal plasma glycoprotein PSP-II {Pig (Sus scrofa) [TaxId: 9823]} Length = 112

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Major seminal plasma glycoprotein PSP-II
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 40.8 bits (94), Expect = 9e-06
 Identities = 9/107 (8%), Positives = 22/107 (20%), Gaps = 37/107 (34%)

Query: 80  GCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPTDII------------ 127
            C   I   +G I   +          C W     P  ++++    +             
Sbjct: 8   ECGRVIKDTSGSISNTDRQKNL-----CTWTILMKPDQKVRMAIPYLNLACGKEYVEVFD 62

Query: 128 --------------------SISEGLLVRFRSDDTVVGKGFSASYIA 154
                               S +  + +++          F   +  
Sbjct: 63  GLLSGPSYGKLCAGAAIVFLSTANTMTIKYNRISGNSSSPFLIYFYG 109

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.4 bits (79), Expect = 5e-04
 Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 4/38 (10%)

Query: 41 CMTNNGGC--QHECRNTIGSYICSCHNGYTLLENGHDC 76
          C  N   C    ECR+    + C C   YT   NG  C
Sbjct: 2  CANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQC 37

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.001
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 6/35 (17%)

Query: 37 DKDECMTN---NGGCQHECRNTIGSYICSCHNGYT 68
          D D+C +N   NGG    C++ I SY C C  G+ 
Sbjct: 2  DGDQCESNPCLNGGS---CKDDINSYECWCPFGFE 33

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 32.4 bits (74), Expect = 0.003
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 6/35 (17%)

Query: 37 DKDECMTN---NGGCQHECRNTIGSYICSCHNGYT 68
          D D+C ++   NGG    C++ + SYIC C   + 
Sbjct: 1  DGDQCASSPCQNGGS---CKDQLQSYICFCLPAFE 32

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	186
d1nt0a2	114	Mannose-binding protein associated serine protease	99.68
d1szba1	121	Mannose-binding protein associated serine protease	99.6
d1nzia1	117	Complement C1S component {Human (Homo sapiens) [Ta	99.59
d2qqma3	108	Mannose-binding protein associated serine protease	99.58
d1sppa_	109	Major seminal plasma glycoprotein PSP-I {Pig (Sus	99.55
d1sppb_	112	Major seminal plasma glycoprotein PSP-II {Pig (Sus	99.51
d1sfpa_	111	Acidic seminal fluid protein (ASFP) {Cow (Bos taur	99.5
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.21
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.18
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.12
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.11
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	99.1
d1szba2	45	Mannose-binding protein associated serine protease	99.07
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	99.07
d1nt0a3	45	Mannose-binding protein associated serine protease	99.07
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	99.06
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	99.01
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	98.99
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.96
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	98.72
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	98.67
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	98.66
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	98.64
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.47
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.39
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	98.35
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.0
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	97.92
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	97.9
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.59
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	97.54
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	97.47
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	96.98
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	96.93
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	96.89
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.85
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	96.34
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	95.63
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	95.42
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	95.19
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	95.12
d1szba2	45	Mannose-binding protein associated serine protease	94.95
d1nt0a3	45	Mannose-binding protein associated serine protease	94.82
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	94.49
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	93.73
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	91.53
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	91.3
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	91.17
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	91.05
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	90.68
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	90.58
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	89.67
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	87.98
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	85.5
d1dx5i2	35	Thrombomodulin, different EGF-like domains {Human	85.09
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	82.23

>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.68  E-value=1.1e-16  Score=107.26  Aligned_cols=75  Identities=23%  Similarity=0.484  Sum_probs=67.7

Q ss_pred             ccee-ecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC-----------------------------------
Q psy2974          81 CKYE-ITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT-----------------------------------  124 (186)
Q Consensus        81 C~~~-~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~-----------------------------------  124 (186)
                      |++. ++...|.|.||+||+.|+++..|.|.|.+++|++|.|.|.                                   
T Consensus         1 Cgg~~~~~~~G~i~SP~yP~~Y~~~~~C~w~I~~p~g~~i~l~F~~~f~le~~~~~~c~~d~l~v~~~~~~~~~~Cg~~~   80 (114)
T d1nt0a2           1 CSGQVFTGRSGFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHPEAQCPYDSLKIQTDKREYGPFCGKTL   80 (114)
T ss_dssp             CEEEEECSSSEEEECTTTTSCCCSSCEEEEEEECCSSCEEEEEECSCCBBCCC----C--CEEEEECSSCEEEEECBSSC
T ss_pred             CcCCcCcCCCEEEECCCCCCCCCCCCeEEEEEEeCCCCceeeEEeeeeccccccccccccceeeeeeeccceecccCCcC
Confidence            6775 5678899999999999999999999999999999998752                                   


Q ss_pred             --ceeeeCCeEEEEEEeCCCCCCCCcEEEEEEE
Q psy2974         125 --DIISISEGLLVRFRSDDTVVGKGFSASYIAI  155 (186)
Q Consensus       125 --~~~s~~~~l~i~f~sd~~~~~~GF~~~y~~~  155 (186)
                        .++|.++.|+|+|+||....++||+|+|+++
T Consensus        81 p~~~~S~~n~l~i~F~Sd~~~~~~GF~~~y~s~  113 (114)
T d1nt0a2          81 PPRIETDSNKVTITFTTDESGNHTGWKIHYTST  113 (114)
T ss_dssp             CCCEECSSSEEEEEEECCSCCCCCBCEEEEEEE
T ss_pred             CCCeEecCCEEEEEEEECCCCCCCCEEEEEEEE
Confidence              2678899999999999999999999999986

>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.2e-15  Score=103.04  Aligned_cols=69  Identities=35%  Similarity=0.538  Sum_probs=61.3

Q ss_pred             CCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC------------------------------------------c
Q psy2974          88 PNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT------------------------------------------D  125 (186)
Q Consensus        88 ~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~------------------------------------------~  125 (186)
                      ..|.|+||+||+.|+++..|.|.|.++++++|.|.|.                                          .
T Consensus         9 ~~G~i~SP~yP~~Yp~~~~C~W~I~~p~g~~I~l~f~~fdle~~~~C~~D~l~i~dg~~~~~~~~g~~~~~~~~~~~~~~   88 (121)
T d1szba1           9 VFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSGAKVLATLCGQESTDTERAPGKDT   88 (121)
T ss_dssp             CEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEECCCCTTSCSSEEEEESSSSEEEEECSBTTTTCSSSCTTCC
T ss_pred             CCeEEeCCCCCCCCCCCCeEEEEEEeCCCceeEEEeeeeeeeeeccccccceeeecCCccccceeccccCCCcCCCCCce
Confidence            3699999999999999999999999999999999843                                          2


Q ss_pred             eeeeCCeEEEEEEeCCCCC--CCCcEEEEEEEe
Q psy2974         126 IISISEGLLVRFRSDDTVV--GKGFSASYIAID  156 (186)
Q Consensus       126 ~~s~~~~l~i~f~sd~~~~--~~GF~~~y~~~~  156 (186)
                      ++|.++.|+|.|+||.++.  .+||+|.|++++
T Consensus        89 ~~S~~n~l~i~F~Sd~s~~~~~~GF~~~y~a~D  121 (121)
T d1szba1          89 FYSLGSSLDITFRSDYSNEKPFTGFEAFYAAED  121 (121)
T ss_dssp             EECSSSEEEEEEECCSCCSSCCCEEEEEEEEEE
T ss_pred             EEEcCCEEEEEEEECCCCccCCCCEEEEEEEEC
Confidence            6788999999999998775  479999999874

>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.8e-15  Score=101.49  Aligned_cols=68  Identities=37%  Similarity=0.507  Sum_probs=60.6

Q ss_pred             CCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC------------------------------------------ce
Q psy2974          89 NGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT------------------------------------------DI  126 (186)
Q Consensus        89 ~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~------------------------------------------~~  126 (186)
                      .|.|+||+||..|+++..|.|.|.++++++|.|.|.                                          .+
T Consensus         5 ~G~i~SP~yP~~Yp~~~~C~w~I~~p~g~~I~l~f~~f~le~~~~C~~D~l~I~dg~~~~~~~~~~~~~~~~~~~~~~~~   84 (117)
T d1nzia1           5 YGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCGQRSSNNPHSPIVEEF   84 (117)
T ss_dssp             EEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCGGGCSSEEEEEC---CCEEECSEECCCCSSCCCSEEE
T ss_pred             EEEEeCCCCCCCCCCCCcEEEEEEcCCCCcEEEEEEeeeEeeecccccceeEEecCCCCCCceeeeecCCCCCCcccceE
Confidence            589999999999999999999999999999999853                                          14


Q ss_pred             eeeCCeEEEEEEeCCCCCC--CCcEEEEEEEe
Q psy2974         127 ISISEGLLVRFRSDDTVVG--KGFSASYIAID  156 (186)
Q Consensus       127 ~s~~~~l~i~f~sd~~~~~--~GF~~~y~~~~  156 (186)
                      .|.++.|+|.|+||.+..+  +||+|+|++++
T Consensus        85 ~s~~n~l~i~F~Sd~s~~~~~~GF~~~y~avD  116 (117)
T d1nzia1          85 QVPYNKLQVIFKSDFSNEERFTGFAAYYVATD  116 (117)
T ss_dssp             EESSSEEEEEEEECSCCTTCCCEEEEEEEEEE
T ss_pred             EEcCCEEEEEEEECCCCCCCCCCEEEEEEEEE
Confidence            6889999999999987765  69999999986

>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1.9e-15  Score=99.89  Aligned_cols=64  Identities=36%  Similarity=0.542  Sum_probs=58.9

Q ss_pred             CcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC--------------------------------------------c
Q psy2974          90 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT--------------------------------------------D  125 (186)
Q Consensus        90 G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~--------------------------------------------~  125 (186)
                      |.|+||+||..|+++..|.|.|.++++++|.|.|.                                            .
T Consensus         1 G~i~SP~yP~~Y~~~~~C~w~I~~p~~~~I~l~f~~f~l~~~~~~~~~~~C~~D~l~i~dg~~~~~~~~~~~Cg~~~p~~   80 (108)
T d2qqma3           1 GVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGR   80 (108)
T ss_dssp             EEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCC----CCCSSCSSEEEEESSSTTTSCEEEEECTTCCCCE
T ss_pred             CEEeCCCCCCCCCCCCeEEEEEEeCCCceeeeEEEEEEeecccccccCCCccccEEEEEeccccCCccccEEeeccCCCC
Confidence            67899999999999999999999999999988742                                            3


Q ss_pred             eeeeCCeEEEEEEeCCCCCCCCcEEEEE
Q psy2974         126 IISISEGLLVRFRSDDTVVGKGFSASYI  153 (186)
Q Consensus       126 ~~s~~~~l~i~f~sd~~~~~~GF~~~y~  153 (186)
                      ++|.++.|+|+|+||....++||+|.|+
T Consensus        81 ~~S~~n~l~i~F~Sd~~~~~~GF~~~yt  108 (108)
T d2qqma3          81 IRSSSGILSMVFYTDSAIAKEGFSANYS  108 (108)
T ss_dssp             EEECSSEEEEEEECCSSCCCCEEEEEEE
T ss_pred             EEEcCCEEEEEEEECCCCCCCCEEEEEC
Confidence            6888999999999999999999999996

>d1sppa_ b.23.1.1 (A:) Major seminal plasma glycoprotein PSP-I {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Major seminal plasma glycoprotein PSP-I
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.55  E-value=9.5e-15  Score=96.90  Aligned_cols=74  Identities=20%  Similarity=0.403  Sum_probs=66.2

Q ss_pred             CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC-------------------------------cee
Q psy2974          79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT-------------------------------DII  127 (186)
Q Consensus        79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~-------------------------------~~~  127 (186)
                      ..|++.+++..|.|.||+||     +..|.|.|.++++++|.|.|.                               .++
T Consensus         4 ~~Cgg~l~~~~G~i~Sp~yP-----~~~C~W~I~~p~g~~I~l~f~~f~~~c~~d~l~i~~g~~~~~~~~~~c~~~~~~~   78 (109)
T d1sppa_           4 HACGGRLTDDYGTIFTYKGP-----KTECVWTLQVDPKYKLLVSIPTLNLTCGKEYVEVLEGAPGSKSLGKFCEGLSILN   78 (109)
T ss_dssp             CSSCEEEECSEEEEECCCSS-----CSEEEEEEECCTTSEEEEEEEEEECCTTTEEEEEESSSTTSCEEEEESEEEEEEE
T ss_pred             ccCCCEEeCCCEEEeCCCCC-----CCcEEEEEEEccCceeEEEEeccccccceeeeeeecCCCccceeeeecCCcccce
Confidence            35899999999999999998     458999999999999999854                               368


Q ss_pred             eeCCeEEEEEEeCCCCCCCCcEEEEEEEeC
Q psy2974         128 SISEGLLVRFRSDDTVVGKGFSASYIAIDT  157 (186)
Q Consensus       128 s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~  157 (186)
                      |.++.|+|+|+||.+..++||++.|++.+.
T Consensus        79 s~~n~~~i~F~Sd~~~~~~GF~~~y~~~~~  108 (109)
T d1sppa_          79 RGSSGMTVKYKRDSGHPASPYEIIFLRDSQ  108 (109)
T ss_dssp             EECTTCEEEEEECTTCCCCCCEEEEEEECC
T ss_pred             eccceEEEEEEECCCCCCCCEEEEEEEeCC
Confidence            999999999999999999999999997654

>d1sppb_ b.23.1.1 (B:) Major seminal plasma glycoprotein PSP-II {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Major seminal plasma glycoprotein PSP-II
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.51  E-value=2.9e-14  Score=94.98  Aligned_cols=73  Identities=12%  Similarity=0.354  Sum_probs=65.6

Q ss_pred             CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC--------------------------------ce
Q psy2974          79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT--------------------------------DI  126 (186)
Q Consensus        79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~--------------------------------~~  126 (186)
                      ..|++.++...|.|.||+||..|     |.|.|.++++++|+|.|.                                .+
T Consensus         7 ~~CGg~l~~~~G~i~SP~~P~~~-----C~W~I~~p~~~~I~l~f~~f~~~C~~d~l~I~dg~~~~~~l~~~Cg~~~~~~   81 (112)
T d1sppb_           7 DECGRVIKDTSGSISNTDRQKNL-----CTWTILMKPDQKVRMAIPYLNLACGKEYVEVFDGLLSGPSYGKLCAGAAIVF   81 (112)
T ss_dssp             GGTTEEECCSEEEEECCSSCCSE-----EEEEEECCTTCEEEEEEEEEECCBTTEEEEEESSSTTSCEEEEESEEEEEEE
T ss_pred             CcCCCEEeCCcceEeCCCCCCCc-----eEEEEecCCcEEEEEEEEehhcccccceeEEEeccCcceeeeeecCCCCccc
Confidence            46999999999999999998765     999999999999999854                                36


Q ss_pred             eeeCCeEEEEEEeCCCCCCCCcEEEEEEEe
Q psy2974         127 ISISEGLLVRFRSDDTVVGKGFSASYIAID  156 (186)
Q Consensus       127 ~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~  156 (186)
                      .|.++.|+|+|++|....++||++.|....
T Consensus        82 ~S~sn~l~v~f~s~~~~~~~GF~~~y~~~~  111 (112)
T d1sppb_          82 LSTANTMTIKYNRISGNSSSPFLIYFYGSS  111 (112)
T ss_dssp             ECSSSEEEEEEEESSCSCCCCCEEEEEEEC
T ss_pred             cccccEEEEEEEECCCCCCCCEEEEEEEeC
Confidence            888999999999999999999999998764

>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Acidic seminal fluid protein (ASFP)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.50  E-value=5e-14  Score=93.61  Aligned_cols=74  Identities=19%  Similarity=0.357  Sum_probs=66.1

Q ss_pred             CCcceeecCCCCcccCCCCCCCCCCCCceEEEEEcCCCCEEEeccC--------------------------------ce
Q psy2974          79 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLNPT--------------------------------DI  126 (186)
Q Consensus        79 ~~C~~~~~~~~G~i~sp~~p~~y~~~~~C~w~i~~~~g~~i~l~~~--------------------------------~~  126 (186)
                      ..|++.++...|.|.+|     |+++..|.|.|.+++|++|.|.|.                                ++
T Consensus         5 ~~Cgg~lt~~~G~i~SP-----y~~~~~C~w~I~~p~g~~I~l~f~~f~~~c~~d~v~i~dg~~~~~~~~~~cg~~~~~~   79 (111)
T d1sfpa_           5 TNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQLNCNKESLEIIDGLPGSPVLGKICEGSLMDY   79 (111)
T ss_dssp             CSSCEEECCSEEEEECC-----CSSCSEEEEEEECCTTCEEEEEEEEEECCTTTEEEEEESSSTTSCEEEEESEEEEEEE
T ss_pred             cCCCcEEECCceeEcCC-----CCCCCcEEEEEEcCCCceeeEEEeecccccceeeeeecCCccceeeeccccCCCcCCE
Confidence            46999999999999998     456889999999999999999854                                47


Q ss_pred             eeeCCeEEEEEEeCCCCCCCCcEEEEEEEeC
Q psy2974         127 ISISEGLLVRFRSDDTVVGKGFSASYIAIDT  157 (186)
Q Consensus       127 ~s~~~~l~i~f~sd~~~~~~GF~~~y~~~~~  157 (186)
                      .|.+|.|+|+|+||.+..++||++.|.+.+.
T Consensus        80 ~S~~n~l~v~F~sd~~~~~~GF~~~y~~~p~  110 (111)
T d1sfpa_          80 RSSGSIMTVKYIREPEHPASFYEVLYFQDPQ  110 (111)
T ss_dssp             ECSSSEEEEEEEECTTSCCCCCEEEEEEESC
T ss_pred             EeCCCEEEEEEEECCCcCCCCEEEEEEEecC
Confidence            8899999999999999999999999998764

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=3.3e-12  Score=69.80  Aligned_cols=42  Identities=33%  Similarity=0.687  Sum_probs=38.2

Q ss_pred             cccccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          36 QDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        36 ~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      .|||||...+..|.+.|+|++|+|.|.|++||.+..+++.|.
T Consensus         1 TDidEC~~~~~~c~~~C~Nt~G~y~C~C~~Gy~l~~d~~~C~   42 (43)
T d1uzka1           1 TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCV   42 (43)
T ss_dssp             CCCCGGGSTTSSBTSEEEEETTEEEEECCTTCEECTTSSBEE
T ss_pred             CCccccCCCCcCcCCEeECCCCCEEEecCCCCEECCCCCccc
Confidence            489999987777889999999999999999999999988885

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=3e-12  Score=69.85  Aligned_cols=42  Identities=45%  Similarity=0.903  Sum_probs=37.5

Q ss_pred             cccccccccccCcc-cccccCCCceEEEecCCeeeeccccccc
Q psy2974          36 QDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        36 ~d~~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      +|||||...+..|. +.|+|++|+|.|.|++||.+..++++|+
T Consensus         1 qDinEC~~~~~~c~~~~C~Nt~Gsy~C~C~~Gy~l~~~~~~Ce   43 (43)
T d1uzka2           1 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD   43 (43)
T ss_dssp             EECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred             CCcccccCCCCCcCCCEEECCCCCeEeECCCCCeECcCCCccC
Confidence            58999998777775 7999999999999999999999888874

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=5.6e-12  Score=68.39  Aligned_cols=41  Identities=41%  Similarity=0.720  Sum_probs=36.8

Q ss_pred             ccccccccccCccc-ccccCCCceEEEecCCeeeeccccccc
Q psy2974          37 DKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        37 d~~eC~~~~~~C~~-~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      |||||...+..|.+ .|+|++|+|.|.|++||.+..+++.|.
T Consensus         1 DidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~l~~d~~~Cv   42 (42)
T d1lmja2           1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI   42 (42)
T ss_dssp             ECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCCC
T ss_pred             CccccCCCCCCCCCCEeECCCCCeEEeCCCCCeECcCCCccC
Confidence            78999988888875 899999999999999999998888773

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.4e-11  Score=67.12  Aligned_cols=42  Identities=40%  Similarity=0.775  Sum_probs=36.2

Q ss_pred             CccccccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          34 KSQDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        34 ~C~d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      +|.|||||..++..|.+.|+|++|+|.|.|++||.+.  ++.|+
T Consensus         1 sCvDidEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~~~--g~~C~   42 (43)
T d1emoa1           1 SAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILA--GNECV   42 (43)
T ss_dssp             CCCCCCSSSSTTSCSSSCCCCCSSCCCCCCCTTEEES--SSCEE
T ss_pred             CCcceeccCCcCCCCCCEeECCCCCeEeECCCCcccC--CCccc
Confidence            4899999998777788899999999999999999874  55564

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=2.2e-11  Score=65.12  Aligned_cols=40  Identities=38%  Similarity=0.997  Sum_probs=36.1

Q ss_pred             ccccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        37 d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      ++|||...++.|+|.|+|++++|+|.|++||.|. ++++|+
T Consensus         1 G~neC~~~nggC~h~C~n~~g~~~C~C~~Gy~L~-d~~tC~   40 (40)
T d3bpse1           1 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV-AQRRCE   40 (40)
T ss_dssp             CSCGGGTGGGGCSSEEEECSSSEEEECCTTCCEE-TTTEEC
T ss_pred             CcccCCCCCCCCcCEEEcCCCCEEEECCCCCEEC-CCCcCC
Confidence            3689999889999999999999999999999996 777774

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.1e-11  Score=66.46  Aligned_cols=41  Identities=44%  Similarity=1.060  Sum_probs=36.1

Q ss_pred             ccccccccc---CcccccccCCCceEEEecCCeeeecccccccc
Q psy2974          38 KDECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        38 ~~eC~~~~~---~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      ||||...++   .|.+.|+|++|+|.|.|++||.|..++++|.+
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCeECCCCCCccC
Confidence            688987554   58899999999999999999999999999863

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.9e-11  Score=69.05  Aligned_cols=42  Identities=48%  Similarity=1.097  Sum_probs=35.8

Q ss_pred             cccccccccccC--------cccccccCCCceEEEecCCeeeeccccccc
Q psy2974          36 QDKDECMTNNGG--------CQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        36 ~d~~eC~~~~~~--------C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      .|||||...+..        |.|.|+|++|+|+|.|++||.|..++++|+
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeECCCCCcee
Confidence            478999865433        467899999999999999999999999886

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.07  E-value=2.7e-11  Score=66.67  Aligned_cols=40  Identities=50%  Similarity=1.081  Sum_probs=33.1

Q ss_pred             ccccccccc---CcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          38 KDECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        38 ~~eC~~~~~---~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      ||||...++   .|.+.|+|++|+|+|.|++||.|..++++|.
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy~C~C~~Gy~L~~d~~tC~   43 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCS   43 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCEEEeCCCCCEECCCCCccc
Confidence            688987543   4889999999999999999999999999885

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.9e-11  Score=64.65  Aligned_cols=39  Identities=36%  Similarity=0.835  Sum_probs=35.6

Q ss_pred             cccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          38 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        38 ~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      ||||.. ++.|.|.|+|++|+|.|.|++||.|..++++|+
T Consensus         1 idEC~~-~~~C~~~C~n~~Gsy~C~C~~Gy~L~~d~~~C~   39 (41)
T d1i0ua2           1 IDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK   39 (41)
T ss_dssp             CCTTTT-TTSCSSCEECSSSCCEECCCTTEEECTTTCCEE
T ss_pred             CccCCC-CCCCCCEeECCCCCEEeECCCCCeECCCCCccc
Confidence            689975 578999999999999999999999999999886

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=4.6e-11  Score=63.49  Aligned_cols=34  Identities=35%  Similarity=0.719  Sum_probs=30.7

Q ss_pred             ccccccccccCcccccccCCCceEEEecCCeeeec
Q psy2974          37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLE   71 (186)
Q Consensus        37 d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~   71 (186)
                      |||||... ..|++.|+|++|+|.|.|++||.+..
T Consensus         1 DidEC~~~-~~C~~~C~N~~Gsy~C~C~~Gy~l~g   34 (40)
T d1dx5i3           1 DIDECENG-GFCSGVCHNLPGTFECICGPDSALAG   34 (40)
T ss_dssp             ECCHHHHC-SSCSSEEEECSSSEEEEECSSSSCEE
T ss_pred             CccccCCC-cCccCEeeCCCCCeEeECCCCCeeCC
Confidence            68999764 78999999999999999999999864

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.1e-10  Score=62.98  Aligned_cols=39  Identities=38%  Similarity=0.884  Sum_probs=35.0

Q ss_pred             ccccc-cccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          39 DECMT-NNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        39 ~eC~~-~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      |||.. ..+.|+|.|+|++|+|+|.|++||.|..++++|.
T Consensus         1 dEC~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2           1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCCCCCCCcCCCCEeecCCCCEEEeCCCCCEECCCCCeec
Confidence            68875 4478999999999999999999999999999985

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.5e-10  Score=63.03  Aligned_cols=41  Identities=34%  Similarity=0.733  Sum_probs=34.4

Q ss_pred             cccccccccccCccc-ccccCCCceEEEecCCeeee-cccccc
Q psy2974          36 QDKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLL-ENGHDC   76 (186)
Q Consensus        36 ~d~~eC~~~~~~C~~-~C~n~~g~~~C~C~~G~~l~-~~~~~C   76 (186)
                      .|||||...+..|.+ .|+|++|+|.|.|++||.+. .+++.|
T Consensus         1 TDidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~~~~~~g~~C   43 (44)
T d1lmja1           1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC   43 (44)
T ss_dssp             CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSE
T ss_pred             CcccccCCCCCCCCCCEeEcCCCCeEEeCCCCCccCCCCCCcC
Confidence            489999987777765 89999999999999999876 356666

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=3.6e-09  Score=59.13  Aligned_cols=38  Identities=39%  Similarity=0.910  Sum_probs=34.8

Q ss_pred             ccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974          41 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        41 C~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      |...++.|+|.|++++++|+|.|+.||.|..++++|.+
T Consensus         2 C~~~NGgC~~~C~~~~g~~~C~C~~Gy~L~~D~~tC~~   39 (50)
T d1autl2           2 CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP   39 (50)
T ss_dssp             SSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred             CCCCCCCcccEeecCCCCeEEECCCCCEECCCCCcccc
Confidence            56677899999999999999999999999999999963

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=4.1e-09  Score=59.13  Aligned_cols=38  Identities=42%  Similarity=0.995  Sum_probs=34.9

Q ss_pred             ccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974          41 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        41 C~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      |...++.|+|.|.+++++|+|.|+.||.|..++++|.+
T Consensus         3 C~~~NGgC~h~C~n~~g~~~C~C~~Gy~L~~D~~tC~~   40 (51)
T d2p3ua1           3 CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP   40 (51)
T ss_dssp             GGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             cCCCCCCcccEeecCCCCeEeEcCCCCEECCCCCcccc
Confidence            66677899999999999999999999999999999974

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=6.8e-09  Score=57.91  Aligned_cols=39  Identities=28%  Similarity=0.682  Sum_probs=34.8

Q ss_pred             ccccccccCcccccc------cCCCceEEEecCCeeeeccccccc
Q psy2974          39 DECMTNNGGCQHECR------NTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        39 ~eC~~~~~~C~~~C~------n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      +||...++.|+|.|+      +..++|+|.|+.||.|..++++|.
T Consensus         5 neC~~~NGGC~h~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tCi   49 (50)
T d1ijqa2           5 ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL   49 (50)
T ss_dssp             SSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             cccCCCCCCCcCccCCCcCcccCCCCEEEeCCCCCEECCCCCccc
Confidence            678888899999996      556899999999999999999985

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.64  E-value=6.6e-09  Score=58.31  Aligned_cols=38  Identities=37%  Similarity=0.924  Sum_probs=34.7

Q ss_pred             ccccccCcccccccCCCceEEEecCCeeeecccccccc
Q psy2974          41 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        41 C~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      |..+++.|+|.|+++.++|.|.|++||.|..++++|.+
T Consensus         1 C~~~NGgC~h~C~~~~~~~~C~C~~Gy~L~~D~~tC~~   38 (51)
T d1kigl_           1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVS   38 (51)
T ss_dssp             CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEE
T ss_pred             CCCCCCCcccEeEcCCCcEEeEcCCCCEECCCCCcccc
Confidence            55677899999999999999999999999999999974

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=5.8e-08  Score=52.16  Aligned_cols=38  Identities=47%  Similarity=1.059  Sum_probs=31.7

Q ss_pred             cccccccccccCcc--cccccCCCceEEEecCCeeeeccccccc
Q psy2974          36 QDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        36 ~d~~eC~~~~~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      +||+||...+.+|.  +.|+++.++|.|.|++||.    +..|+
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~----G~~Ce   40 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRCE   40 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE----STTSC
T ss_pred             CCCccccCCCCCCCCCcEeECCCCCEEeECCCCCc----CCCCc
Confidence            48999987656775  6999999999999999997    66664

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=8.4e-08  Score=54.81  Aligned_cols=39  Identities=38%  Similarity=0.962  Sum_probs=34.5

Q ss_pred             cccccccCcccccccCCC-ceEEEecCCeeeecccccccc
Q psy2974          40 ECMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        40 eC~~~~~~C~~~C~n~~g-~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      .|..+++.|+|.|+++++ +|+|.|+.||.|..|+++|.+
T Consensus         2 ~C~~~NGgC~h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~   41 (57)
T d1rfnb_           2 TCNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP   41 (57)
T ss_dssp             CTTGGGGGCSSEEEECTTSCEEEECCTTEEECTTSSSEEE
T ss_pred             ccCCCCCCcccEeeeCCCCCeEeECCCCCEECCCCCcccc
Confidence            467777899999999875 899999999999999999974

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.3e-07  Score=53.16  Aligned_cols=38  Identities=42%  Similarity=1.147  Sum_probs=33.4

Q ss_pred             ccccccCcccccccCCC-ceEEEecCCeeeecccccccc
Q psy2974          41 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE   78 (186)
Q Consensus        41 C~~~~~~C~~~C~n~~g-~~~C~C~~G~~l~~~~~~C~~   78 (186)
                      |..+++.|+|.|.++++ +|.|.|+.||.|..++++|.+
T Consensus         2 C~~~NGGC~h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~   40 (53)
T d2bz6l1           2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP   40 (53)
T ss_dssp             TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCCCCCCCcCEeeeCCCCCEEeECCCCCEECCCCCcccC
Confidence            56677899999999886 588999999999999999974

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.00  E-value=1.8e-06  Score=44.71  Aligned_cols=36  Identities=31%  Similarity=0.845  Sum_probs=29.3

Q ss_pred             ccccccccccCcccccccCCCceEEEecCCeeeecccccc
Q psy2974          37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC   76 (186)
Q Consensus        37 d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C   76 (186)
                      |+|+|..++....+.|++..++|.|.|++||.    +..|
T Consensus         1 D~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~----G~~C   36 (37)
T d2c4fl1           1 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFE----GRNC   36 (37)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEE----STTS
T ss_pred             CcccCCCCCCCCCCEEECCCCCeEEECCCCCc----CCCC
Confidence            68899876544457999999999999999997    5555

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=3e-06  Score=44.37  Aligned_cols=37  Identities=35%  Similarity=0.818  Sum_probs=29.9

Q ss_pred             ccccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          37 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        37 d~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      |+|+|...+....+.|++..++|.|.|++||.    ++.|+
T Consensus         2 d~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~----G~~Ce   38 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFE----GKNCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred             ccccCCCCCCCCCcEEEcCCCCEEEECCCCCC----CCCCC
Confidence            68899876544457999999999999999997    66663

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=4.8e-06  Score=43.50  Aligned_cols=36  Identities=33%  Similarity=0.863  Sum_probs=28.9

Q ss_pred             cccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          38 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        38 ~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      ||+|...+....+.|++..++|.|.|++||.    +..|+
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~----G~~Ce   36 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYE----GVHCE   36 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEE----SSSSC
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCc----cCcCe
Confidence            5788876544457999999999999999997    66664

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.59  E-value=9.6e-06  Score=42.51  Aligned_cols=30  Identities=37%  Similarity=0.924  Sum_probs=24.1

Q ss_pred             cCcc--cccccCCCceEEEecCCeeeeccccccc
Q psy2974          46 GGCQ--HECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        46 ~~C~--~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      ..|.  ..|+|++|+|.|.|++||.  .++..|.
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~--GdG~~C~   38 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYT--GNGRQCV   38 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEE--ECSSSEE
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCc--CCCCEee
Confidence            3453  5799999999999999997  4577775

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=3.6e-05  Score=39.04  Aligned_cols=34  Identities=35%  Similarity=0.871  Sum_probs=26.4

Q ss_pred             ccccccccCcccccccCCCceEEEecCCeeeecccccc
Q psy2974          39 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC   76 (186)
Q Consensus        39 ~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C   76 (186)
                      |+|...+....++|++..++|+|.|++||.    ++.|
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~----G~~C   34 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFT----GHLC   34 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEE----SSSS
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCC----CCCc
Confidence            467765433457999999999999999997    5555

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=3.7e-05  Score=39.98  Aligned_cols=35  Identities=34%  Similarity=1.003  Sum_probs=27.4

Q ss_pred             ccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          39 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        39 ~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      |+|...+....+.|++..++|.|.|++||.    +..|+
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~----G~~Ce   35 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCE   35 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTEE----TTTTC
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCCC----cCcCe
Confidence            567765433357999999999999999997    76664

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.00024  Score=36.79  Aligned_cols=35  Identities=31%  Similarity=0.870  Sum_probs=26.1

Q ss_pred             ccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          39 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        39 ~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      +.|...+....+.|++..++|.|.|++||.    +..|+
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~----G~~Ce   36 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFS----GLKCE   36 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEE----STTSC
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCc----CcCcC
Confidence            346554433347999999999999999997    66664

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00029  Score=38.18  Aligned_cols=35  Identities=31%  Similarity=0.861  Sum_probs=27.0

Q ss_pred             cccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          38 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        38 ~~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      .++|..++.. .++|++..++|.|.|++||.    +..|+
T Consensus         8 ~~~C~~~PC~-nG~C~~~~~~y~C~C~~G~~----G~~Ce   42 (48)
T d1autl1           8 EHPCASLCCG-HGTCIDGIGSFSCDCRSGWE----GRFCQ   42 (48)
T ss_dssp             CCSSSSTTTT-SEEECCCSSCCCEEECTTEE----STTSC
T ss_pred             CCcccCCCCC-CCEEECCCCCCeEeCCCCCc----CCCcc
Confidence            4667765432 26899999999999999997    76764

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00039  Score=36.13  Aligned_cols=35  Identities=40%  Similarity=0.893  Sum_probs=26.1

Q ss_pred             ccccccccCcccccccCCCceEEEecCCeeeeccccccc
Q psy2974          39 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        39 ~eC~~~~~~C~~~C~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      +.|..++....+.|+...++|.|.|++||.    +..|+
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y~C~C~~g~~----G~~Ce   36 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNYTCSCYPGFY----GPECE   36 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEE----STTSC
T ss_pred             CcccCCcCCCCcEEECCCCCeEEeCCCCcc----CCCCC
Confidence            346554433357899999999999999997    66664

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.00035  Score=34.64  Aligned_cols=31  Identities=35%  Similarity=0.953  Sum_probs=25.4

Q ss_pred             ccccccccCcc-cccccCCCceEEEecCCeeee
Q psy2974          39 DECMTNNGGCQ-HECRNTIGSYICSCHNGYTLL   70 (186)
Q Consensus        39 ~eC~~~~~~C~-~~C~n~~g~~~C~C~~G~~l~   70 (186)
                      +||... .+|. ++|.|..|+|.|.|..||...
T Consensus         2 dECsig-npCGnGTCtNviGgFec~C~~GFepg   33 (39)
T d1emoa2           2 DECSVG-NPCGNGTCKNVIGGFECTCEEGFEPG   33 (39)
T ss_dssp             CGGGTT-CSSSSSCEEECSSSEEECCSSSSCCC
T ss_pred             CccccC-CccCCceeeecccceEEeecCCcCCC
Confidence            678765 3574 799999999999999999743

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=96.34  E-value=0.0013  Score=34.43  Aligned_cols=36  Identities=28%  Similarity=0.700  Sum_probs=26.5

Q ss_pred             cccccccccCcccccccC-CCceEEEecC-Ceeeeccccccc
Q psy2974          38 KDECMTNNGGCQHECRNT-IGSYICSCHN-GYTLLENGHDCK   77 (186)
Q Consensus        38 ~~eC~~~~~~C~~~C~n~-~g~~~C~C~~-G~~l~~~~~~C~   77 (186)
                      ++.|..++....++|+.. .++|.|.|+. ||.    +..|+
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce   39 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCT   39 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcC----CcCcC
Confidence            577877654445799875 6899999986 897    66664

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.005  Score=31.87  Aligned_cols=24  Identities=8%  Similarity=-0.024  Sum_probs=18.1

Q ss_pred             CCCCCCCCCC--------cEEEcCCCCCcccc
Q psy2974          15 CNESPHDTLT--------VFSKIGDSFKSQDK   38 (186)
Q Consensus        15 c~~~~~~~~~--------Gy~~~~d~~~C~d~   38 (186)
                      |...|+++.+        ||.|.+|++.|++|
T Consensus        10 C~~~C~n~~Gsy~C~C~~Gy~L~~d~~~C~ai   41 (41)
T d1i0ua2          10 CSQLCVNLEGGYKCQCEEGFQLDPHTKACKAV   41 (41)
T ss_dssp             CSSCEECSSSCCEECCCTTEEECTTTCCEEEC
T ss_pred             CCCEeECCCCCEEeECCCCCeECCCCCccccC
Confidence            4556666655        99999999999864

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.0033  Score=35.85  Aligned_cols=36  Identities=28%  Similarity=0.565  Sum_probs=24.6

Q ss_pred             cccccccccCccccc-----ccCCCceEEEecCCeeeeccccccc
Q psy2974          38 KDECMTNNGGCQHEC-----RNTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        38 ~~eC~~~~~~C~~~C-----~n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      .++|...+....+.|     .+..++|.|.|++||.    +..|+
T Consensus         6 c~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~----G~~Ce   46 (63)
T d1haea_           6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCT   46 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred             CCCCcCCcCCCCCEEeecccccCCCCEEeECCCCCC----CCCcC
Confidence            355655433334577     3566899999999997    77775

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.19  E-value=0.0078  Score=31.11  Aligned_cols=35  Identities=31%  Similarity=0.858  Sum_probs=24.8

Q ss_pred             ccccccccCcccccccC-CCceEEEec-CCeeeeccccccc
Q psy2974          39 DECMTNNGGCQHECRNT-IGSYICSCH-NGYTLLENGHDCK   77 (186)
Q Consensus        39 ~eC~~~~~~C~~~C~n~-~g~~~C~C~-~G~~l~~~~~~C~   77 (186)
                      |.|..++....+.|++. .++|.|.|+ +||.    +..|+
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~----G~~Ce   38 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCT   38 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTC
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcC----CcCcC
Confidence            56766543335789875 688999997 5997    66664

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.12  E-value=0.0078  Score=31.10  Aligned_cols=25  Identities=24%  Similarity=1.034  Sum_probs=19.4

Q ss_pred             ccccccC--CCceEEEecCCeeeeccccccc
Q psy2974          49 QHECRNT--IGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        49 ~~~C~n~--~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      .++|+..  .++|+|.|++||.    +..|+
T Consensus         9 gG~C~~~~~~~~y~C~C~~g~~----G~~Ce   35 (41)
T d1tpga1           9 GGTCQQALYFSDFVCQCPEGFA----GKSCE   35 (41)
T ss_dssp             TCEEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred             CCEEecCCCCCCeEECCCCCCC----CCCcC
Confidence            4678764  4689999999997    76775

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.95  E-value=0.0064  Score=32.11  Aligned_cols=23  Identities=13%  Similarity=0.281  Sum_probs=17.5

Q ss_pred             CCCCCCCCCC--------cEEEcCCCCCccc
Q psy2974          15 CNESPHDTLT--------VFSKIGDSFKSQD   37 (186)
Q Consensus        15 c~~~~~~~~~--------Gy~~~~d~~~C~d   37 (186)
                      |...|+|+.+        ||.|..|+++|.|
T Consensus        14 C~~~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2          14 CDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             SSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCCCCccCCCCeEEECCCCCeECCCCCCccC
Confidence            4556666655        8899999999975

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.82  E-value=0.0053  Score=32.48  Aligned_cols=25  Identities=12%  Similarity=0.166  Sum_probs=18.4

Q ss_pred             CCCCCCCCCCC--------cEEEcCCCCCcccc
Q psy2974          14 NCNESPHDTLT--------VFSKIGDSFKSQDK   38 (186)
Q Consensus        14 ~c~~~~~~~~~--------Gy~~~~d~~~C~d~   38 (186)
                      .|...|+|+++        ||.|..|+++|..+
T Consensus        13 ~C~~~C~Nt~gsy~C~C~~Gy~L~~d~~tC~~i   45 (45)
T d1nt0a3          13 PCDHYCHNYLGGYYCSCRVGYILHQNKHTCSAL   45 (45)
T ss_dssp             CCSSEEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred             CCCCEeecCCCCEEEeCCCCCEECCCCCccccC
Confidence            35666666665        88999999988753

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.49  E-value=0.0057  Score=31.97  Aligned_cols=23  Identities=13%  Similarity=-0.055  Sum_probs=17.6

Q ss_pred             CCCCCCCCCC--------cEEEcCCCCCccc
Q psy2974          15 CNESPHDTLT--------VFSKIGDSFKSQD   37 (186)
Q Consensus        15 c~~~~~~~~~--------Gy~~~~d~~~C~d   37 (186)
                      |++.|+|+.+        ||.+.++++.|.|
T Consensus        13 c~~~C~Nt~G~y~C~C~~Gy~l~~d~~~C~D   43 (43)
T d1uzka1          13 ISGNCVNTPGSYICDCPPDFELNPTRVGCVD   43 (43)
T ss_dssp             BTSEEEEETTEEEEECCTTCEECTTSSBEEC
T ss_pred             cCCEeECCCCCEEEecCCCCEECCCCCcccC
Confidence            5777777777        7788888888864

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.73  E-value=0.028  Score=30.38  Aligned_cols=35  Identities=9%  Similarity=0.030  Sum_probs=24.2

Q ss_pred             cCcCCCCCCCCCCCCCC-cEEEcCCCCCcccccccc
Q psy2974           8 IEDKCNNCNESPHDTLT-VFSKIGDSFKSQDKDECM   42 (186)
Q Consensus         8 ~~~~C~~c~~~~~~~~~-Gy~~~~d~~~C~d~~eC~   42 (186)
                      .+-.|.+-..++.+.+. ||.|..|+++|.++++|.
T Consensus         8 C~h~C~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~~p   43 (51)
T d1kigl_           8 CDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERFP   43 (51)
T ss_dssp             SSSCCCEETTEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred             cccEeEcCCCcEEeEcCCCCEECCCCCccccCCccC
Confidence            34445444444444444 999999999999998863

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.53  E-value=0.095  Score=28.35  Aligned_cols=25  Identities=36%  Similarity=1.002  Sum_probs=19.0

Q ss_pred             cccccc--CCCceEEEecCCeeeeccccccc
Q psy2974          49 QHECRN--TIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        49 ~~~C~n--~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      .++|..  ...+|+|.|++||.    +..|+
T Consensus        17 gG~C~~~~~~~~~~C~C~~gy~----G~~Ce   43 (53)
T d3egfa_          17 GGVCMHIESLDSYTCNCVIGYS----GDRCQ   43 (53)
T ss_dssp             SCEEEEESSSSCEEEECCTTCC----SSSSC
T ss_pred             CcEeeccCCCCCeEeECCCCCc----CCCCc
Confidence            367864  34689999999997    76775

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.30  E-value=0.085  Score=27.91  Aligned_cols=25  Identities=32%  Similarity=0.930  Sum_probs=18.9

Q ss_pred             cccccc--CCCceEEEecCCeeeeccccccc
Q psy2974          49 QHECRN--TIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        49 ~~~C~n--~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      .++|..  ...+|+|.|++||.    +..|+
T Consensus        15 gG~C~~~~~~~~~~C~C~~gy~----G~~Ce   41 (48)
T d1nqlb_          15 DGVCMYIEALDKYACNCVVGYI----GERCQ   41 (48)
T ss_dssp             TCEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred             CcEEeeeCCCCCeEEeCCCCcc----cCCCC
Confidence            367865  34689999999997    66664

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.17  E-value=0.046  Score=29.31  Aligned_cols=32  Identities=6%  Similarity=-0.053  Sum_probs=21.1

Q ss_pred             cCCCCCCCCCCCCCC-cEEEcCCCCCccccccc
Q psy2974          10 DKCNNCNESPHDTLT-VFSKIGDSFKSQDKDEC   41 (186)
Q Consensus        10 ~~C~~c~~~~~~~~~-Gy~~~~d~~~C~d~~eC   41 (186)
                      -.|.+...++.+++. ||.|..|+++|..+.+.
T Consensus        11 ~~C~~~~g~~~C~C~~Gy~L~~D~~tC~~~~~~   43 (50)
T d1autl2          11 HYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF   43 (50)
T ss_dssp             SEEEECSSSEEEECCTTEEECTTSSCEEECSSS
T ss_pred             cEeecCCCCeEEECCCCCEECCCCCccccCCCC
Confidence            334333444444433 99999999999887763

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.05  E-value=0.044  Score=28.25  Aligned_cols=22  Identities=9%  Similarity=0.092  Sum_probs=15.9

Q ss_pred             CCCCCCCCCC--------cEEEcCCCCCcc
Q psy2974          15 CNESPHDTLT--------VFSKIGDSFKSQ   36 (186)
Q Consensus        15 c~~~~~~~~~--------Gy~~~~d~~~C~   36 (186)
                      |...|+++++        ||.|.+|+++|.
T Consensus        11 C~~~C~n~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2          11 CSHFCNNFIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             SSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCCEeecCCCCEEEeCCCCCEECCCCCeec
Confidence            4455666655        889999998885

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.68  E-value=0.042  Score=29.61  Aligned_cols=17  Identities=0%  Similarity=-0.074  Sum_probs=14.9

Q ss_pred             cEEEcCCCCCccccccc
Q psy2974          25 VFSKIGDSFKSQDKDEC   41 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC   41 (186)
                      ||.|.+|+++|.+..++
T Consensus        28 Gy~L~~D~~tC~~~~~~   44 (51)
T d2p3ua1          28 GYTLADNGKACIPTGPY   44 (51)
T ss_dssp             TEEECTTSSCEEESSSS
T ss_pred             CCEECCCCCccccCCcc
Confidence            99999999999987753

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.58  E-value=0.17  Score=25.99  Aligned_cols=22  Identities=14%  Similarity=0.010  Sum_probs=13.0

Q ss_pred             CCCccCcCCCCCCCCCCCCCCcE
Q psy2974           4 LDPRIEDKCNNCNESPHDTLTVF   26 (186)
Q Consensus         4 ~~~~~~~~C~~c~~~~~~~~~Gy   26 (186)
                      +|++....+ .|+..|+|+.++|
T Consensus         5 idEC~~~~~-~~~~~C~Nt~Gsy   26 (43)
T d1emoa1           5 MDECKEPDV-CKHGQCINTDGSY   26 (43)
T ss_dssp             CCSSSSTTS-CSSSCCCCCSSCC
T ss_pred             eeccCCcCC-CCCCEeECCCCCe
Confidence            566444444 2577788877733

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.67  E-value=0.028  Score=30.55  Aligned_cols=22  Identities=18%  Similarity=0.288  Sum_probs=15.5

Q ss_pred             CCCCCCCCCC--------cEEEcCCCCCcc
Q psy2974          15 CNESPHDTLT--------VFSKIGDSFKSQ   36 (186)
Q Consensus        15 c~~~~~~~~~--------Gy~~~~d~~~C~   36 (186)
                      |...|+|+.+        ||.|..|+++|+
T Consensus        22 c~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_          22 CQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             TSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             ccCEeEcCCCCeEeECCCCCeECCCCCcee
Confidence            3445666655        888888888875

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.98  E-value=0.29  Score=24.56  Aligned_cols=26  Identities=27%  Similarity=0.888  Sum_probs=20.4

Q ss_pred             CcccccccC-CCceEEEecCCeeeecc
Q psy2974          47 GCQHECRNT-IGSYICSCHNGYTLLEN   72 (186)
Q Consensus        47 ~C~~~C~n~-~g~~~C~C~~G~~l~~~   72 (186)
                      .|..+|... .++|.|.|..||....+
T Consensus        11 ~CE~qCqP~~~~~Y~CiCaeGFaP~p~   37 (43)
T d1dx5i1          11 NCEYQCQPLDQTSYLCVCAEGFAPIPH   37 (43)
T ss_dssp             CCSSEEEECSSSCEEEECCTTEEEETT
T ss_pred             CcceeeeeCCCCcceEEeccccccCCC
Confidence            478888754 46999999999986554

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.50  E-value=0.3  Score=26.70  Aligned_cols=17  Identities=0%  Similarity=-0.123  Sum_probs=15.1

Q ss_pred             cEEEcCCCCCccccccc
Q psy2974          25 VFSKIGDSFKSQDKDEC   41 (186)
Q Consensus        25 Gy~~~~d~~~C~d~~eC   41 (186)
                      ||.|..|++.|..+.++
T Consensus        29 Gy~L~~D~~tC~~~~~f   45 (57)
T d1rfnb_          29 GYRLAENQKSCEPAVPF   45 (57)
T ss_dssp             TEEECTTSSSEEECSSS
T ss_pred             CCEECCCCCccccCCCc
Confidence            99999999999987764

>d1dx5i2 g.3.11.1 (I:388-422) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.09  E-value=0.28  Score=23.34  Aligned_cols=25  Identities=28%  Similarity=0.793  Sum_probs=15.7

Q ss_pred             CcccccccCCCceEEEecCCeeeecc
Q psy2974          47 GCQHECRNTIGSYICSCHNGYTLLEN   72 (186)
Q Consensus        47 ~C~~~C~n~~g~~~C~C~~G~~l~~~   72 (186)
                      .|...|... ..-.|+||.||.|...
T Consensus         7 ~CPAdCdP~-~p~~C~CPeGyIldeg   31 (35)
T d1dx5i2           7 ACPADCDPN-TQASCECPEGYILDDG   31 (35)
T ss_dssp             EEECEECTT-STTCEECCTTEEEETT
T ss_pred             cCCCccCCC-CCCcccCCCceEeccc
Confidence            455555422 2235999999998743

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.23  E-value=0.61  Score=24.18  Aligned_cols=24  Identities=33%  Similarity=0.876  Sum_probs=17.3

Q ss_pred             cccc--cCCCceEEEecCCeeeeccccccc
Q psy2974          50 HECR--NTIGSYICSCHNGYTLLENGHDCK   77 (186)
Q Consensus        50 ~~C~--n~~g~~~C~C~~G~~l~~~~~~C~   77 (186)
                      +.|.  .....+.|.|++||.    +..|+
T Consensus        17 G~C~~~~~~~~~~C~C~~gY~----G~RCe   42 (46)
T d1k36a_          17 GQCIYLVDMSQNYCRCEVGYT----GVRCE   42 (46)
T ss_dssp             EEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred             CEEEEeCCCCccEeECCCCce----ecCce
Confidence            4564  345689999999997    65664