Psyllid ID: psy3121


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
MYRPLAKLSFSVNDPRGYVDKAMHALSSTIVEINVEVLEHSNIGLVSQATTYALLKIAQPREILALVDGPSIQFQETIKLLLIYDYQICLMGILCLKVPRYLKEFRVEQCPLFLQHKCTQHRPFTCFHWHFMNQRRRRPVRKRDGSFNYSPDTYCTKYDETTGLCPDGDDPDTYCTKYDETTGLCPDGDE
ccccccccEEEEcccccHHHHHHHHHHccEEEEEEEEEEcccccHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccccccHHHcccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccccccEEEEEccccccHHHHHHHHHHccEEEEEHEEHHcccHcHHHHHHHHHHHHHHcHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcHHHHHcccccccccccEccccccccccccccccccccccccccEcccccccccccccccccccccccHHccccccccccc
myrplaklsfsvndprgyvDKAMHALSSTIVEINVEVLehsniglvSQATTYALLKIAqpreilalvdgpsiqfQETIKLLLIYDYQICLMGILCLKVPRYLKEFrveqcplflqhkctqhrpftcfhwhfmnqrrrrpvrkrdgsfnyspdtyctkydettglcpdgddpdtyctkydettglcpdgde
myrplaklsfsvndprGYVDKAMHALSSTIVEINVEVLEHSNIGLVSQATTYALLKIAQPREILALVDGPSIQFQETIKLLLIYDYQICLMGILCLKVPRYLKEFRVEQCPLFLQHKCTQHRPFTCFHWHfmnqrrrrpvrkrdgsfnyspdtyctkydettglcpdgddPDTYCTKYdettglcpdgde
MYRPLAKLSFSVNDPRGYVDKAMHALSSTIVEINVEVLEHSNIGLVSQATTYALLKIAQPREILALVDGPSIQFQETIKLLLIYDYQICLMGILCLKVPRYLKEFRVEQCPLFLQHKCTQHRPFTCFHWHFMNQRRRRPVRKRDGSFNYSPDTYCTKYDETTGLCPDGDDPDTYCTKYDETTGLCPDGDE
**************PRGYVDKAMHALSSTIVEINVEVLEHSNIGLVSQATTYALLKIAQPREILALVDGPSIQFQETIKLLLIYDYQICLMGILCLKVPRYLKEFRVEQCPLFLQHKCTQHRPFTCFHWHFMNQRR*********SFNYSPDTYCTKYDETTGLCPDGDDPDTYCTKYD***********
***P*AKLSFSVNDPRGYVDKAMHALSSTIVEINVEVLEHSNIGLVSQATTYALLKIAQPREILALVDGPSIQFQETIKLLLIYDYQICLMGILCLKVPRYLKEFRVEQCPLFLQHKCTQHRPFTCFHWHFMNQ*************NYSPDTYCTKYDETTGLCPDGDDPDTYCTKYDETTGLCPD***
MYRPLAKLSFSVNDPRGYVDKAMHALSSTIVEINVEVLEHSNIGLVSQATTYALLKIAQPREILALVDGPSIQFQETIKLLLIYDYQICLMGILCLKVPRYLKEFRVEQCPLFLQHKCTQHRPFTCFHWHFMNQRRRRPVRKRDGSFNYSPDTYCTKYDETTGLCPDGDDPDTYCTKYDETTGLCPDGDE
MYRPLAKLSFSVNDPRGYVDKAMHALSSTIVEINVEVLEHSNIGLVSQATTYALLKIAQPREILALVDGPSIQFQETIKLLLIYDYQICLMGILCLKVPRYLKEFRVEQCPLFLQHKCTQHRPFTCFHWHFMNQRRRRPVRKRDGSFNYSPDTYCTKYDETTGLCPDGDDPDTYCTKYDETTGLCPD***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MYRPLAKLSFSVNDPRGYVDKAMHALSSTIVEINVEVLEHSNIGLVSQATTYALLKIAQPREILALVDGPSIQFQETIKLLLIYDYQICLMGILCLKVPRYLKEFRVEQCPLFLQHKCTQHRPFTCFHWHFMNQRRRRPVRKRDGSFNYSPDTYCTKYDETTGLCPDGDDPDTYCTKYDETTGLCPDGDE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query190 2.2.26 [Sep-21-2011]
Q8BL48 810 RING finger protein unkem yes N/A 0.415 0.097 0.746 3e-29
Q9C0B0 810 RING finger protein unkem yes N/A 0.415 0.097 0.746 3e-29
Q5FWH2 727 Putative E3 ubiquitin-pro no N/A 0.421 0.110 0.761 3e-29
Q6EE22 810 RING finger protein unkem yes N/A 0.415 0.097 0.746 4e-29
Q9H9P5 680 Putative E3 ubiquitin-pro no N/A 0.421 0.117 0.738 1e-28
Q86B79 599 RING finger protein unkem yes N/A 0.368 0.116 0.828 6e-26
>sp|Q8BL48|UNK_MOUSE RING finger protein unkempt homolog OS=Mus musculus GN=Unk PE=1 SV=1 Back     alignment and function desciption
 Score =  127 bits (320), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 62/83 (74%), Positives = 70/83 (84%), Gaps = 4/83 (4%)

Query: 101 YLKEFRVEQCPLFLQHKCTQHRPFTCFHWHFMNQRRRRPVRKRDGSFNYSPDTYCTKYDE 160
           YLKEFR EQCPLF+QHKCTQHRP+TCFHWHF+NQRRRR +R+RDG+FNYSPD YCTKYDE
Sbjct: 36  YLKEFRTEQCPLFVQHKCTQHRPYTCFHWHFVNQRRRRSIRRRDGTFNYSPDVYCTKYDE 95

Query: 161 TTGLCPDGDDPDTYCTKYDETTG 183
            TGLCP+GD+    C     TTG
Sbjct: 96  ATGLCPEGDE----CPFLHRTTG 114





Mus musculus (taxid: 10090)
>sp|Q9C0B0|UNK_HUMAN RING finger protein unkempt homolog OS=Homo sapiens GN=UNK PE=1 SV=2 Back     alignment and function description
>sp|Q5FWH2|UNKL_MOUSE Putative E3 ubiquitin-protein ligase UNKL OS=Mus musculus GN=Unkl PE=2 SV=2 Back     alignment and function description
>sp|Q6EE22|UNK_CANFA RING finger protein unkempt homolog OS=Canis familiaris GN=UNK PE=2 SV=1 Back     alignment and function description
>sp|Q9H9P5|UNKL_HUMAN Putative E3 ubiquitin-protein ligase UNKL OS=Homo sapiens GN=UNKL PE=1 SV=3 Back     alignment and function description
>sp|Q86B79|UNK_DROME RING finger protein unkempt OS=Drosophila melanogaster GN=unk PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query190
443692092 325 hypothetical protein CAPTEDRAFT_170777 [ 0.368 0.215 0.857 1e-32
313235955 1089 unnamed protein product [Oikopleura dioi 0.363 0.063 0.826 3e-31
391328058 701 PREDICTED: RING finger protein unkempt h 0.368 0.099 0.830 1e-30
334333835 954 PREDICTED: RING finger protein unkempt-l 0.426 0.084 0.8 4e-30
326929157 860 PREDICTED: RING finger protein unkempt-l 0.421 0.093 0.809 5e-30
344248308 1301 Coiled-coil domain-containing protein 15 0.421 0.061 0.761 8e-30
341890028 689 hypothetical protein CAEBREN_04516 [Caen 0.368 0.101 0.8 1e-29
313242378 711 unnamed protein product [Oikopleura dioi 0.363 0.097 0.826 1e-29
268580359 677 Hypothetical protein CBG16872 [Caenorhab 0.368 0.103 0.8 2e-29
183986651 757 unkempt homolog-like [Xenopus (Silurana) 0.415 0.104 0.807 2e-29
>gi|443692092|gb|ELT93766.1| hypothetical protein CAPTEDRAFT_170777 [Capitella teleta] Back     alignment and taxonomy information
 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 60/70 (85%), Positives = 68/70 (97%)

Query: 101 YLKEFRVEQCPLFLQHKCTQHRPFTCFHWHFMNQRRRRPVRKRDGSFNYSPDTYCTKYDE 160
           YLKEFR +QCPLFLQHKCTQHRP+TCFHWHFMNQRRRRP+RK+DG++NYSPD YCTKYDE
Sbjct: 20  YLKEFRTQQCPLFLQHKCTQHRPYTCFHWHFMNQRRRRPIRKKDGTYNYSPDVYCTKYDE 79

Query: 161 TTGLCPDGDD 170
           TTG+CP+GDD
Sbjct: 80  TTGICPEGDD 89




Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|313235955|emb|CBY25099.1| unnamed protein product [Oikopleura dioica] Back     alignment and taxonomy information
>gi|391328058|ref|XP_003738510.1| PREDICTED: RING finger protein unkempt homolog [Metaseiulus occidentalis] Back     alignment and taxonomy information
>gi|334333835|ref|XP_001363593.2| PREDICTED: RING finger protein unkempt-like [Monodelphis domestica] Back     alignment and taxonomy information
>gi|326929157|ref|XP_003210736.1| PREDICTED: RING finger protein unkempt-like [Meleagris gallopavo] Back     alignment and taxonomy information
>gi|344248308|gb|EGW04412.1| Coiled-coil domain-containing protein 154 [Cricetulus griseus] Back     alignment and taxonomy information
>gi|341890028|gb|EGT45963.1| hypothetical protein CAEBREN_04516 [Caenorhabditis brenneri] Back     alignment and taxonomy information
>gi|313242378|emb|CBY34530.1| unnamed protein product [Oikopleura dioica] Back     alignment and taxonomy information
>gi|268580359|ref|XP_002645162.1| Hypothetical protein CBG16872 [Caenorhabditis briggsae] Back     alignment and taxonomy information
>gi|183986651|ref|NP_001116915.1| unkempt homolog-like [Xenopus (Silurana) tropicalis] gi|169642614|gb|AAI60454.1| unkl protein [Xenopus (Silurana) tropicalis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query190
UNIPROTKB|E1BQC4 731 E1BQC4 "Uncharacterized protei 0.415 0.108 0.807 2.2e-36
UNIPROTKB|D4A3S7 727 RGD1565247 "Protein RGD1565247 0.421 0.110 0.761 3.2e-34
MGI|MGI:1921404 727 Unkl "unkempt-like (Drosophila 0.421 0.110 0.761 4.2e-34
UNIPROTKB|Q9H9P5 680 UNKL "Putative E3 ubiquitin-pr 0.421 0.117 0.738 1.5e-33
UNIPROTKB|F1P3C2 813 UNK "Uncharacterized protein" 0.415 0.097 0.746 1.6e-33
UNIPROTKB|F1MNI6 775 Bt.106083 "Uncharacterized pro 0.421 0.103 0.738 1.8e-33
UNIPROTKB|E9PDK2 733 UNKL "Putative E3 ubiquitin-pr 0.421 0.109 0.738 1.9e-33
ZFIN|ZDB-GENE-040426-707 777 unk "unkempt homolog (Drosophi 0.368 0.090 0.842 2.3e-33
UNIPROTKB|F6QHJ6 809 UNK "Uncharacterized protein" 0.415 0.097 0.746 2.6e-33
UNIPROTKB|Q6EE22 810 UNK "RING finger protein unkem 0.415 0.097 0.746 2.6e-33
UNIPROTKB|E1BQC4 E1BQC4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 399 (145.5 bits), Expect = 2.2e-36, P = 2.2e-36
 Identities = 67/83 (80%), Positives = 72/83 (86%)

Query:   101 YLKEFRVEQCPLFLQHKCTQHRPFTCFHWHFMNQRRRRPVRKRDGSFNYSPDTYCTKYDE 160
             YLKEFR EQCPLFLQHKCTQHRPFTCFHWHF+NQRRRRP+R+RDG+FNYSPD YCTKYDE
Sbjct:    28 YLKEFRTEQCPLFLQHKCTQHRPFTCFHWHFLNQRRRRPIRRRDGTFNYSPDVYCTKYDE 87

Query:   161 TTGLCPDGDDPDTYCTKYDETTG 183
             TTG+CPDGDD    C     TTG
Sbjct:    88 TTGICPDGDD----CPYLHRTTG 106


GO:0003676 "nucleic acid binding" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
UNIPROTKB|D4A3S7 RGD1565247 "Protein RGD1565247" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1921404 Unkl "unkempt-like (Drosophila)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H9P5 UNKL "Putative E3 ubiquitin-protein ligase UNKL" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1P3C2 UNK "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MNI6 Bt.106083 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E9PDK2 UNKL "Putative E3 ubiquitin-protein ligase UNKL" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-707 unk "unkempt homolog (Drosophila)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F6QHJ6 UNK "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q6EE22 UNK "RING finger protein unkempt homolog" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9C0B0UNK_HUMANNo assigned EC number0.74690.41570.0975yesN/A
Q8BL48UNK_MOUSENo assigned EC number0.74690.41570.0975yesN/A
Q6EE22UNK_CANFANo assigned EC number0.74690.41570.0975yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 190
KOG1595|consensus 528 100.0
>KOG1595|consensus Back     alignment and domain information
Probab=100.00  E-value=8.5e-35  Score=266.90  Aligned_cols=97  Identities=68%  Similarity=1.244  Sum_probs=92.1

Q ss_pred             eeeccccccchhhhhhhhccccCchhhcccccCCCceeeeecccCcccccCCcccCCCCCccCCceeeeeccCCcccCCC
Q psy3121          88 ICLMGILCLKVPRYLKEFRVEQCPLFLQHKCTQHRPFTCFHWHFMNQRRRRPVRKRDGSFNYSPDTYCTKYDETTGLCPD  167 (190)
Q Consensus        88 ~~~~~~~~~~~~~YLkeFRveqCplF~QhkC~qHRPyTCF~WHF~NQRRRRPvr~~DGtFNYSPDVYCskYDE~TG~CP~  167 (190)
                      -|+.+.+++++++||||||+|| |+|+||||.|||||+||+|||.||||||||+++|||||||+|+||++|+|.||+||+
T Consensus        13 s~~~e~~~~~~~~~~k~~~~e~-~~~~~~~~~~~r~~~~~k~~~~~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~   91 (528)
T KOG1595|consen   13 SCLSEFEAPNDYAYLKEFRVEQ-PLFLQHKCLQHRPFVCFKWHFLNQRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPD   91 (528)
T ss_pred             hcchhhccccHHHHHHHHHHhc-hhhhhhhhcccccchhhhhhhhccccccchhhhcCccccccceeecchhhccccCCC
Confidence            4566899999999999999999 999999999999999999999999999999999999999999999999999999999


Q ss_pred             CC------------CCCceEeeeeccccCCC
Q psy3121         168 GD------------DPDTYCTKYDETTGLCP  186 (190)
Q Consensus       168 GD------------terkYhlRYyk~TGsCp  186 (190)
                      ||            .|++|||+||| |+.|.
T Consensus        92 ~~~~C~~~g~s~~~~e~~~hL~~~k-~~~~~  121 (528)
T KOG1595|consen   92 GDEHCAVLGRSVGDTERTYHLRYYK-TLPCV  121 (528)
T ss_pred             CcccchhcccccCCcceeEeccccc-cccCc
Confidence            65            58999999999 88874




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00