Psyllid ID: psy3156

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------

MNQKCKVIGNVFPNDSKSFVDLKLKQPEDVILAKFRALLTNNADPDTTTLTNFVNEYFEAGNELQVWSPPDFTSNPSIENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTISFNNTQELIEQENASGESDYLLESDQLVGR

cccHHHHHcccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccEEEEEcccEEEEEEEEcccccccccccHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccEEEccHHHHHcccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccHHHHHcccccccccccccccccccc

ccHHHHHHHccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHHHcccccEEEEccccEEEccccEEEEEEHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccccEEEEEcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccEEEEEEccccEEEEEEEccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccEEEEccccccccccccEEcccEccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEcccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHcccccHHHccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccEcccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccEEEcc

mnqkckvignvfpndsksfvdlklkqpEDVILAKFRALLtnnadpdtttlTNFVNEYFEAgnelqvwsppdftsnpsienkiSDAKYRQFALDLNQIWKELGRIVkqdvrdnpqlysliytpngffipggrfrelyyWDTYWIVQGILLCDMKDSARGVIENIISLVdqfgfmpngaRVYYLersqppllipmaasyakytgdtNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARyyapsrgprpesyredyhEAADLQTEDEKNFLYSELKagaetgwdfssrwfiardgsnrgglkyirttsiipVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDydiknkkprnyfyvsnitplwtLSYKFSKQYVAERVLQYLrdneiitkdnqvkfygtptslfnstqqwdypnawaPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKAMFEKYDVELIgktgnggeyeaqtgfgwtnGFAFELLNRYGKTISFNNTQELIEQenasgesdyllesdqlvgr

mnqkckvignvfpndsksfvDLKLKQPEDVILAKFRALltnnadpdtTTLTNFVNEYFEAGNELQVWSPPDFTSNPSIENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVtvekngkyyTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAgaetgwdfsSRWFIARDgsnrgglkyirtTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTISFNNTQELIEqenasgesdyllesdqlvgr

*****KVIGNVFPNDSKSFVDLKLKQPEDVILAKFRALLTNNADPDTTTLTNFVNEYFEAGNELQVWSPPDF******ENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYA**************************NFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTISFNNT*************************

**QKCKVIGNVFPNDSKSFVDLKLKQPEDVILAKFRALLTNNADPDTTTLTNFVNEYFEAGNELQVWSPPDFTSNPSIENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKAMFEKYDVE*IG***NGGEYEAQTGFGWTNGFAFELLNRYGKTISF***********************Q****

MNQKCKVIGNVFPNDSKSFVDLKLKQPEDVILAKFRALLTNNADPDTTTLTNFVNEYFEAGNELQVWSPPDFTSNPSIENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAP**********EDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTISFNNTQELIEQENASGESDYLLESDQLVGR

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		557	2.2.26 [Sep-21-2011]
Q8MMG9		585	Trehalase OS=Pimpla hypoc	N/A	N/A	0.938	0.894	0.469	1e-139
A8J4S9		626	Trehalase OS=Apis mellife	no	N/A	0.910	0.809	0.484	1e-139
O43280		583	Trehalase OS=Homo sapiens	yes	N/A	0.906	0.866	0.462	1e-129
Q9W2M2		596	Trehalase OS=Drosophila m	yes	N/A	0.912	0.852	0.451	1e-129
P19813		578	Trehalase OS=Oryctolagus	yes	N/A	0.928	0.894	0.433	1e-129
P32358		579	Trehalase OS=Bombyx mori	N/A	N/A	0.942	0.906	0.428	1e-128
Q9JLT2		576	Trehalase OS=Mus musculus	yes	N/A	0.906	0.876	0.444	1e-126
P32359		555	Trehalase OS=Tenebrio mol	N/A	N/A	0.912	0.915	0.425	1e-121
Q54QZ5		594	Trehalase OS=Dictyosteliu	yes	N/A	0.912	0.855	0.361	3e-93
Q9FWC1		563	Probable trehalase OS=Ory	yes	N/A	0.845	0.836	0.374	2e-87

>sp\|Q8MMG9\|TREA_PIMHY Trehalase OS=Pimpla hypochondriaca GN=tre1 PE=1 SV=1	Back alignment and function desciption

 Score =  496 bits (1278), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 250/532 (46%), Positives = 336/532 (63%), Gaps = 9/532 (1%)

Query: 4   KCKVIGNVFPNDSKSFVDLKLKQPEDVILAKFRALLT-NNADPDTTTLTNFVNEYFEAGN 62
           K   +G VF  D K+FVD        V +A FR L+      P+   LT +V E F   N
Sbjct: 57  KTIQLGEVF-KDGKTFVDHYQVNDPSVTVANFRKLMAETGGKPNKDQLTQYVKENFAQEN 115

Query: 63  ELQVWSPPDFTSNPSIENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTP 122
           E+  WSPPD+  NP    ++ D  +R++A DLN +WK + R V   V ++P+ +S+I   
Sbjct: 116 EVIDWSPPDWQENPEFLQRVQDPVFRKWAKDLNDVWKIISRKVAPSVAEHPERHSIISVD 175

Query: 123 NGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYL 182
           NGF +PGGRF+E YYWD+YW+++G+LL  MK+++RG++EN +S+V +FGF+PNG RVYYL
Sbjct: 176 NGFIVPGGRFQEFYYWDSYWVMEGLLLTGMKNTSRGILENFLSMVTRFGFIPNGGRVYYL 235

Query: 183 ERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYY 242
            RSQPPLLIPM   Y  +TGD  F+R ++ +L  E  Y++ +  V V KNGK Y MARY 
Sbjct: 236 MRSQPPLLIPMVDLYLTHTGDMQFLRDNIGTLEKELGYFLSQKTVDVTKNGKTYKMARYI 295

Query: 243 APSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGL 302
             S GPRPESYREDY  A ++  E EK   Y +LKA AE+GWDFSSRW+I+ +G+ RG L
Sbjct: 296 VSSNGPRPESYREDYELAKNINDEAEKRRFYEDLKAAAESGWDFSSRWYISENGT-RGSL 354

Query: 303 KYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQV 362
             I T +IIPV+LNA LQ NA  L+++    GN   +  YK IA    +AI +VLW+E  
Sbjct: 355 SNIATRNIIPVELNAFLQRNARMLAQFHTTLGNPTKAKYYKDIATSYQQAIDDVLWSESE 414

Query: 363 GVWLDYDIKNKKPRNYFYVSNITPLWTLSYKFSK-QYVAERVLQYLRDNEIITKDNQVKF 421
           GVWLD+D++N + RNYF+ +N+ PL+T S+  SK Q   +R   YL  N I+        
Sbjct: 415 GVWLDFDLRNSQHRNYFFPTNVAPLYTQSFDSSKAQIYGQRAAAYLTRNGILD-----YM 469

Query: 422 YGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYET 481
            GTP SLF + +QWD PNAW PLQ+ I+Q L  + ++ A+++A  LA +WL  N+ GY  
Sbjct: 470 GGTPASLFPTGEQWDLPNAWPPLQSIIVQALRNSNEESAEKLAKELAIRWLRANHKGYSQ 529

Query: 482 SKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTISFNNTQ 533
           S  MFEKYD    GK G GGEY  Q GFGWTNG  +E LN Y      +N  
Sbjct: 530 SGQMFEKYDALNPGKFGGGGEYVVQEGFGWTNGVVYEFLNSYPNATPDDNVH 581

Pimpla hypochondriaca (taxid: 135724)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 8

>sp\|A8J4S9\|TREA_APIME Trehalase OS=Apis mellifera PE=1 SV=1	Back alignment and function description

>sp\|O43280\|TREA_HUMAN Trehalase OS=Homo sapiens GN=TREH PE=1 SV=2	Back alignment and function description

>sp\|Q9W2M2\|TREA_DROME Trehalase OS=Drosophila melanogaster GN=Treh PE=1 SV=1	Back alignment and function description

>sp\|P19813\|TREA_RABIT Trehalase OS=Oryctolagus cuniculus GN=TREH PE=1 SV=1	Back alignment and function description

>sp\|P32358\|TREA_BOMMO Trehalase OS=Bombyx mori PE=1 SV=1	Back alignment and function description

>sp\|Q9JLT2\|TREA_MOUSE Trehalase OS=Mus musculus GN=Treh PE=2 SV=1	Back alignment and function description

>sp\|P32359\|TREA_TENMO Trehalase OS=Tenebrio molitor PE=2 SV=1	Back alignment and function description

>sp\|Q54QZ5\|TREA_DICDI Trehalase OS=Dictyostelium discoideum GN=treh PE=3 SV=1	Back alignment and function description

>sp\|Q9FWC1\|TRE_ORYSJ Probable trehalase OS=Oryza sativa subsp. japonica GN=Os10g0521000 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		557
386266701		589	soluble trehalase [Aphis glycines]	0.933	0.882	0.600	1e-177
328716320		606	PREDICTED: trehalase-like isoform 2 [Acy	0.933	0.858	0.601	1e-177
193715980		589	PREDICTED: trehalase-like isoform 1 [Acy	0.933	0.882	0.601	1e-177
328716322		592	PREDICTED: trehalase-like [Acyrthosiphon	0.965	0.908	0.559	1e-174
328724520		592	PREDICTED: trehalase-like [Acyrthosiphon	0.935	0.880	0.549	1e-161
389889251		602	soluble trehalase [Laodelphax striatella	0.922	0.853	0.514	1e-153
225219830		546	soluble trehalase [Nilaparvata lugens]	0.901	0.919	0.527	1e-153
242025580		609	Trehalase precursor, putative [Pediculus	0.919	0.840	0.518	1e-149
410718531		588	soluble trehalase [Bemisia tabaci]	0.921	0.872	0.502	1e-145
307207404		668	Trehalase [Harpegnathos saltator]	0.910	0.758	0.494	1e-144

>gi\|386266701\|gb\|AFJ00065.1\| soluble trehalase [Aphis glycines]	Back alignment and taxonomy information

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 314/523 (60%), Positives = 382/523 (73%), Gaps = 3/523 (0%)

Query: 8   IGNVFPNDSKSFVDLKLKQPEDVILAKFRALLT--NNADPDTTTLTNFVNEYFEAGNELQ 65
           +  ++P DSK+FVD KLK  E  IL K++ L    N   P    LT FV++  E G+EL+
Sbjct: 58  LSKIYP-DSKTFVDKKLKYTESEILQKYKKLKNTYNGNVPPNDELTKFVDQNLEDGDELE 116

Query: 66  VWSPPDFTSNPSIENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGF 125
            W+PPDFT +PSI N+I D  ++Q++L LN++WK L R VK DV+D+P  YSLI+ PNGF
Sbjct: 117 EWNPPDFTESPSITNRIRDKNFKQWSLGLNKVWKTLARKVKIDVKDHPDKYSLIWVPNGF 176

Query: 126 FIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYLERS 185
            IPGGRFRELYYWDTYWIV G+LLCDM  +ARGVI+NI+ LV  FGFMPNGARVYYL RS
Sbjct: 177 AIPGGRFRELYYWDTYWIVNGMLLCDMSSTARGVIDNILYLVKLFGFMPNGARVYYLNRS 236

Query: 186 QPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPS 245
           QPP++  M ASY K T D ++++  + +L +EF++W +  MVT EKNGK YTMAR+YAPS
Sbjct: 237 QPPMVTLMVASYYKATNDFDYVKKVISTLDSEFDFWTENRMVTFEKNGKSYTMARFYAPS 296

Query: 246 RGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYI 305
           RGPRPESYREDY  A + +TEDEKN  Y ++K+GAETGWDFSSRWFI  +GS+RG L  I
Sbjct: 297 RGPRPESYREDYETAENFKTEDEKNDFYVKIKSGAETGWDFSSRWFITSNGSDRGVLSDI 356

Query: 306 RTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVW 365
            T  I+PVDLN+IL +NA  LS W+ K GN + + KY  IA  LL +I EV+W   +G W
Sbjct: 357 HTPEIVPVDLNSILHINALTLSTWYSKMGNTNKAEKYYTIATNLLNSIQEVMWRPDLGAW 416

Query: 366 LDYDIKNKKPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTP 425
            D+DIKN K R YFY+SNI PLWT SY   K+ VA  VL YLRD  II  D  V F GTP
Sbjct: 417 FDWDIKNNKSREYFYISNIVPLWTESYNMPKKSVASSVLGYLRDQHIIEPDYSVNFNGTP 476

Query: 426 TSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKAM 485
           TSL+ S+QQWD+PNAW PLQAFIIQGLD TQ KLA+QVA +LAE WL +NY G+     M
Sbjct: 477 TSLYASSQQWDFPNAWPPLQAFIIQGLDKTQQKLAQQVAQKLAEVWLRSNYKGFAEKSMM 536

Query: 486 FEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTIS 528
           FEKYDV   G+TG GGEY  QTGFGWTNG  FE LNR+G T+S
Sbjct: 537 FEKYDVLASGETGGGGEYTPQTGFGWTNGVVFEFLNRWGDTVS 579

Source: Aphis glycines

Species: Aphis glycines

Genus: Aphis

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi\|328716320\|ref\|XP_003245895.1\| PREDICTED: trehalase-like isoform 2 [Acyrthosiphon pisum]	Back alignment and taxonomy information

>gi\|193715980\|ref\|XP_001950264.1\| PREDICTED: trehalase-like isoform 1 [Acyrthosiphon pisum]	Back alignment and taxonomy information

>gi\|328716322\|ref\|XP_001952111.2\| PREDICTED: trehalase-like [Acyrthosiphon pisum]	Back alignment and taxonomy information

>gi\|328724520\|ref\|XP_001943494.2\| PREDICTED: trehalase-like [Acyrthosiphon pisum]	Back alignment and taxonomy information

>gi\|389889251\|gb\|AFL03409.1\| soluble trehalase [Laodelphax striatella]	Back alignment and taxonomy information

>gi\|225219830\|gb\|ACN85420.1\| soluble trehalase [Nilaparvata lugens]	Back alignment and taxonomy information

>gi\|242025580\|ref\|XP_002433202.1\| Trehalase precursor, putative [Pediculus humanus corporis] gi\|212518743\|gb\|EEB20464.1\| Trehalase precursor, putative [Pediculus humanus corporis]	Back alignment and taxonomy information

>gi\|410718531\|gb\|AFV79626.1\| soluble trehalase [Bemisia tabaci]	Back alignment and taxonomy information

>gi\|307207404\|gb\|EFN85130.1\| Trehalase [Harpegnathos saltator]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		557
UNIPROTKB\|E9PLW7		577	TREH "Trehalase" [Homo sapiens	0.904	0.873	0.463	1.1e-126
UNIPROTKB\|O43280		583	TREH "Trehalase" [Homo sapiens	0.904	0.864	0.463	1.1e-126
FB\|FBgn0003748		596	Treh "Trehalase" [Drosophila m	0.912	0.852	0.453	1.3e-125
UNIPROTKB\|E1B8N4		579	TREH "Uncharacterized protein"	0.904	0.870	0.455	1.6e-125
UNIPROTKB\|E2RQS0		575	TREH "Uncharacterized protein"	0.903	0.874	0.455	1e-123
ZFIN\|ZDB-GENE-070912-84		583	treh "trehalase (brush-border	0.908	0.867	0.452	1.7e-123
UNIPROTKB\|G3V7Q9		576	Treh "Trehalase (Brush-border	0.912	0.881	0.447	3.5e-123
UNIPROTKB\|P19813		578	TREH "Trehalase" [Oryctolagus	0.928	0.894	0.433	1.9e-122
MGI\|MGI:1926230		576	Treh "trehalase (brush-border	0.912	0.881	0.445	4e-122
RGD\|61831		557	Treh "trehalase (brush-border	0.912	0.912	0.445	1.1e-121

UNIPROTKB\|E9PLW7 TREH "Trehalase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

 Score = 1244 (443.0 bits), Expect = 1.1e-126, P = 1.1e-126
 Identities = 239/516 (46%), Positives = 332/516 (64%)

Query:    15 DSKSFVDLKLKQPEDVILAKFRALLTN-NADPDTTTLTNFVNEYFEA-GNELQVWSPPDF 72
             D K FVD+ L    + +L  F  L  + N       L  FV+E+F+A G ELQ W+P D+
Sbjct:    50 DDKQFVDMPLSIAPEQVLQTFTELSRDHNHSIPREQLQAFVHEHFQAKGQELQPWTPADW 109

Query:    73 TSNPSIENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRF 132
               +P    KISDAK R +A  L+Q+WK+LG+ +K +V  +P+ +SLIY+ + F +PGGRF
Sbjct:   110 KDSPQFLQKISDAKLRAWAGQLHQLWKKLGKKMKPEVLSHPERFSLIYSEHPFIVPGGRF 169

Query:   133 RELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYLERSQPPLLIP 192
              E YYWD+YW+++G+LL +M ++ +G+++N + LV  +G +PNG RVYYL+RSQPPLL  
Sbjct:   170 VEFYYWDSYWVMEGLLLSEMAETVKGMLQNFLDLVKTYGHVPNGGRVYYLQRSQPPLLTL 229

Query:   193 MAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPES 252
             M   Y  +T DT F++ ++++L  E ++W K   V+V   GK Y + RYY P  GPRPES
Sbjct:   230 MMDCYLTHTNDTAFLQENIETLALELDFWTKNRTVSVSLEGKNYLLNRYYVPYGGPRPES 289

Query:   253 YREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIP 312
             Y +D  E AD   E ++  L++ELKAGAE+GWDFSSRW I   G N   L  IRT+ ++P
Sbjct:   290 YSKDV-ELADTLPEGDREALWAELKAGAESGWDFSSRWLIG--GPNPNSLSGIRTSKLVP 346

Query:   313 VDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKN 372
             VDLNA L      +S ++ + GN   + KY+ +  Q L A++ VLW+EQ G W DYD++ 
Sbjct:   347 VDLNAFLCQAEELMSNFYSRLGNDSQATKYRILRSQRLAALNTVLWDEQTGAWFDYDLEK 406

Query:   373 KKPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNST 432
             KK    FY SN+TPLW     FS   VA++ L+YL DN I+T       YG PTSL  + 
Sbjct:   407 KKKNREFYPSNLTPLWAGC--FSDPGVADKALKYLEDNRILTYQ-----YGIPTSLQKTG 459

Query:   433 QQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKAMFEKYDVE 492
             QQWD+PNAWAPLQ  +I+GL     + A++VA++LA+ W+ TN+  Y    AM+EKYDV 
Sbjct:   460 QQWDFPNAWAPLQDLVIRGLAKAPLRRAQEVAFQLAQNWIRTNFDVYSQKSAMYEKYDVS 519

Query:   493 LIGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTIS 528
               G+ G GGEYE Q GFGWTNG    LL+RYG  ++
Sbjct:   520 NGGQPGGGGEYEVQEGFGWTNGVVLMLLDRYGDRLT 555

GO:0005991 "trehalose metabolic process" evidence=IEA

GO:0004555 "alpha,alpha-trehalase activity" evidence=IEA

UNIPROTKB\|O43280 TREH "Trehalase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

FB\|FBgn0003748 Treh "Trehalase" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

UNIPROTKB\|E1B8N4 TREH "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|E2RQS0 TREH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-070912-84 treh "trehalase (brush-border membrane glycoprotein)" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|G3V7Q9 Treh "Trehalase (Brush-border membrane glycoprotein)" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|P19813 TREH "Trehalase" [Oryctolagus cuniculus (taxid:9986)]	Back alignment and assigned GO terms

MGI\|MGI:1926230 Treh "trehalase (brush-border membrane glycoprotein)" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|61831 Treh "trehalase (brush-border membrane glycoprotein)" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q83RP6	TREA_SHIFL	3, ., 2, ., 1, ., 2, 8	0.3179	0.8384	0.8265	yes	N/A
B7NUW3	TREA_ECO7I	3, ., 2, ., 1, ., 2, 8	0.3173	0.8384	0.8265	yes	N/A
Q32H09	TREA_SHIDS	3, ., 2, ., 1, ., 2, 8	0.3135	0.8384	0.8265	yes	N/A
B4TXW7	TREA_SALSV	3, ., 2, ., 1, ., 2, 8	0.3212	0.8330	0.8140	yes	N/A
Q0T5J8	TREA_SHIF8	3, ., 2, ., 1, ., 2, 8	0.3154	0.8384	0.8265	yes	N/A
A1AAC5	TREA_ECOK1	3, ., 2, ., 1, ., 2, 8	0.3173	0.8384	0.8265	yes	N/A
Q8PPT1	TREA_XANAC	3, ., 2, ., 1, ., 2, 8	0.3181	0.8635	0.8468	yes	N/A
B7MK99	TREA_ECO45	3, ., 2, ., 1, ., 2, 8	0.3173	0.8384	0.8265	yes	N/A
B7UQ86	TREA_ECO27	3, ., 2, ., 1, ., 2, 8	0.3193	0.8384	0.8265	yes	N/A
Q54QZ5	TREA_DICDI	3, ., 2, ., 1, ., 2, 8	0.3619	0.9120	0.8552	yes	N/A
A7ZKW9	TREA_ECO24	3, ., 2, ., 1, ., 2, 8	0.3173	0.8384	0.8265	yes	N/A
P19813	TREA_RABIT	3, ., 2, ., 1, ., 2, 8	0.4333	0.9281	0.8944	yes	N/A
A8AFT6	TREA_CITK8	3, ., 2, ., 1, ., 2, 8	0.3320	0.8348	0.8157	yes	N/A
B1XAN8	TREA_ECODH	3, ., 2, ., 1, ., 2, 8	0.3173	0.8384	0.8265	yes	N/A
Q5PI73	TREA_SALPA	3, ., 2, ., 1, ., 2, 8	0.3212	0.8330	0.8140	yes	N/A
B0RNH1	TREA_XANCB	3, ., 2, ., 1, ., 2, 8	0.3214	0.8258	0.8098	yes	N/A
Q0TIH3	TREA_ECOL5	3, ., 2, ., 1, ., 2, 8	0.3193	0.8384	0.8265	yes	N/A
Q8CW46	TREA_ECOL6	3, ., 2, ., 1, ., 2, 8	0.3173	0.8384	0.8265	yes	N/A
Q4UZ12	TREA_XANC8	3, ., 2, ., 1, ., 2, 8	0.3226	0.8294	0.8133	yes	N/A
Q2NYS3	TREA_XANOM	3, ., 2, ., 1, ., 2, 8	0.3181	0.8635	0.8468	yes	N/A
Q9I165	TREA_PSEAE	3, ., 2, ., 1, ., 2, 8	0.3326	0.8312	0.8495	yes	N/A
B7LXB1	TREA_ECO8A	3, ., 2, ., 1, ., 2, 8	0.3154	0.8384	0.8265	yes	N/A
A7ZZD1	TREA_ECOHS	3, ., 2, ., 1, ., 2, 8	0.3173	0.8384	0.8265	yes	N/A
O43280	TREA_HUMAN	3, ., 2, ., 1, ., 2, 8	0.4622	0.9066	0.8662	yes	N/A
Q9W2M2	TREA_DROME	3, ., 2, ., 1, ., 2, 8	0.4519	0.9120	0.8523	yes	N/A
B5BI56	TREA_SALPK	3, ., 2, ., 1, ., 2, 8	0.3212	0.8330	0.8140	yes	N/A
C4ZTN8	TREA_ECOBW	3, ., 2, ., 1, ., 2, 8	0.3173	0.8384	0.8265	yes	N/A
Q8XT38	TREA_RALSO	3, ., 2, ., 1, ., 2, 8	0.3231	0.8438	0.8529	yes	N/A
B6I9Q8	TREA_ECOSE	3, ., 2, ., 1, ., 2, 8	0.3154	0.8384	0.8265	yes	N/A
Q9SU50	TRE1_ARATH	3, ., 2, ., 1, ., 2, 8	0.3598	0.8940	0.7955	yes	N/A
B5F4F0	TREA_SALA4	3, ., 2, ., 1, ., 2, 8	0.3231	0.8330	0.8140	yes	N/A
B4SUI9	TREA_SALNS	3, ., 2, ., 1, ., 2, 8	0.3231	0.8330	0.8140	yes	N/A
Q9FWC1	TRE_ORYSJ	3, ., 2, ., 1, ., 2, 8	0.3747	0.8456	0.8365	yes	N/A
B1IU96	TREA_ECOLC	3, ., 2, ., 1, ., 2, 8	0.3173	0.8384	0.8265	yes	N/A
Q3YWJ3	TREF_SHISS	3, ., 2, ., 1, ., 2, 8	0.3043	0.8402	0.8524	yes	N/A
Q1RCP3	TREA_ECOUT	3, ., 2, ., 1, ., 2, 8	0.3173	0.8384	0.8265	yes	N/A
B7N408	TREA_ECOLU	3, ., 2, ., 1, ., 2, 8	0.3161	0.8348	0.8230	yes	N/A
Q8P519	TREA_XANCP	3, ., 2, ., 1, ., 2, 8	0.3226	0.8294	0.8133	yes	N/A
Q9JLT2	TREA_MOUSE	3, ., 2, ., 1, ., 2, 8	0.4448	0.9066	0.8767	yes	N/A
B7LGV7	TREA_ECO55	3, ., 2, ., 1, ., 2, 8	0.3173	0.8384	0.8265	yes	N/A
B1LHA4	TREA_ECOSM	3, ., 2, ., 1, ., 2, 8	0.3173	0.8384	0.8265	yes	N/A
Q57NL6	TREA_SALCH	3, ., 2, ., 1, ., 2, 8	0.3156	0.8438	0.8245	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.2.1.28	0.914
3rd Layer	3.2.1	0.921

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		557
pfam01204		509	pfam01204, Trehalase, Trehalase	0.0
PLN02567		554	PLN02567, PLN02567, alpha,alpha-trehalase	1e-163
COG1626		558	COG1626, TreA, Neutral trehalase [Carbohydrate tra	4e-90
PRK13272		542	PRK13272, treA, trehalase; Provisional	5e-78
PRK13271		569	PRK13271, treA, trehalase; Provisional	1e-77
PRK13270		549	PRK13270, treF, trehalase; Provisional	6e-71
COG3408		641	COG3408, GDB1, Glycogen debranching enzyme [Carboh	4e-04

>gnl\|CDD\|216362 pfam01204, Trehalase, Trehalase	Back alignment and domain information

 Score =  545 bits (1406), Expect = 0.0
 Identities = 231/516 (44%), Positives = 305/516 (59%), Gaps = 15/516 (2%)

Query: 14  NDSKSFVDLKLKQPEDVILAKFRALLTN-NADPDTTTLTNFVNEYF-EAGNELQVWSPPD 71
            DSK+FVD+ LK   + IL  FRA   +         L  FV++ F E G+EL+++ PPD
Sbjct: 4   PDSKTFVDMPLKNDPNRILRLFRAQFWDLTRRITGFDLRAFVDDNFDEPGDELRIYVPPD 63

Query: 72  FTSNPSIENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGR 131
           +   P    KI D   R +A  L+ +W  L R VK+ V   P+  SL+  PN F +PGGR
Sbjct: 64  WKEQPEFLAKIEDPSLRLWAEHLHALWPALVRKVKKKVGLLPEASSLLPVPNPFVVPGGR 123

Query: 132 FRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYLERSQPPLLI 191
           FRE YYWD+YWI+ G+L   M D+ARG++EN I L+D++GF+PNG R YYL RSQPP L 
Sbjct: 124 FREFYYWDSYWIILGLLASGMHDTARGMVENFIYLIDKYGFIPNGNRSYYLNRSQPPFLT 183

Query: 192 PMAASYAKYTGDTNFIRTHLKSLTNEFEYWM-KRHMVTVEKNGKYYTMARYYAPSRGPRP 250
            M   Y + T D   +R +L +L  E+ +WM +  +  V      Y + RY  P   PRP
Sbjct: 184 LMVLLYYEKTEDDALVRRYLPALKKEYAFWMAEPRLDPVTGLSDGYLLNRYGDPPETPRP 243

Query: 251 ESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSI 310
           ESYRED   A  L TE  K + Y +LK+ AE+GWDFSSRWF    G + G L  IRTTSI
Sbjct: 244 ESYREDVETAEKLPTERPKAYNYRDLKSAAESGWDFSSRWFRD-SGHDTGYLSSIRTTSI 302

Query: 311 IPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDI 370
           +PVDLNA+L  N   ++ ++   G+ + SA +++ A    +AI + LWNE+ G+W DYD+
Sbjct: 303 VPVDLNALLYKNEKIIAFFYDVLGDSETSAIWEERAEARRDAIDKYLWNEEDGIWYDYDL 362

Query: 371 KNKKPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFN 430
           K +K RNYF  SN  PLW       +     +VL YL  + ++         G PTSL  
Sbjct: 363 KKQKHRNYFSASNFVPLWAGLASPDQAAKVAKVLPYLERSGLLVYP-----GGIPTSLLK 417

Query: 431 STQQWDYPNAWAPLQAFIIQGLD-YTQDKLAKQVAYRLAEKWLFTNYMGYETSKAMFEKY 489
           S QQWDYPN WAPLQ   ++GL  Y  D+LA+    RLA +WLFTN   +  +  M EKY
Sbjct: 418 SGQQWDYPNGWAPLQHLAVEGLRRYGYDELAE----RLAYRWLFTNTKAFVDTGKMVEKY 473

Query: 490 DVELIGKTGN-GGEYEAQTGFGWTNGFAFELLNRYG 524
           DV   G+ GN GGEY  Q GFGWTNG   +LL+ YG
Sbjct: 474 DVTRGGEYGNGGGEYVVQEGFGWTNGVYLDLLDLYG 509

Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi. Length = 509

>gnl\|CDD\|215307 PLN02567, PLN02567, alpha,alpha-trehalase	Back alignment and domain information

>gnl\|CDD\|224541 COG1626, TreA, Neutral trehalase [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|183936 PRK13272, treA, trehalase; Provisional	Back alignment and domain information

>gnl\|CDD\|237326 PRK13271, treA, trehalase; Provisional	Back alignment and domain information

>gnl\|CDD\|183934 PRK13270, treF, trehalase; Provisional	Back alignment and domain information

>gnl\|CDD\|225942 COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		557
PLN02567		554	alpha,alpha-trehalase	100.0
PRK13271		569	treA trehalase; Provisional	100.0
PRK13270		549	treF trehalase; Provisional	100.0
PRK13272		542	treA trehalase; Provisional	100.0
PF01204		512	Trehalase: Trehalase; InterPro: IPR001661 O-Glycos	100.0
KOG0602\|consensus		600		100.0
COG1626		558	TreA Neutral trehalase [Carbohydrate transport and	100.0
PRK10137		786	alpha-glucosidase; Provisional	100.0
PF03200		801	Glyco_hydro_63: Mannosyl oligosaccharide glucosida	100.0
KOG2161\|consensus		849		100.0
PF06202		370	GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR	99.97
COG3408		641	GDB1 Glycogen debranching enzyme [Carbohydrate tra	99.96
TIGR01561		575	gde_arch glycogen debranching enzyme, archaeal typ	99.93
TIGR01531		1464	glyc_debranch glycogen debranching enzymye. glycog	99.88
TIGR01577		616	oligosac_amyl oligosaccharide amylase. The name of	99.69
PF05592		509	Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; Int	99.54
PLN03005		550	beta-fructofuranosidase	99.29
PLN02703		618	beta-fructofuranosidase	99.2
PLN02973		571	beta-fructofuranosidase	99.19
PF04685		365	DUF608: Protein of unknown function, DUF608; Inter	99.19
COG3387		612	SGA1 Glucoamylase and related glycosyl hydrolases	99.18
PF12899		436	Glyco_hydro_100: Alkaline and neutral invertase; I	99.06
TIGR01535		648	glucan_glucosid glucan 1,4-alpha-glucosidase. Gluc	98.91
KOG3625\|consensus		1521		98.65
COG4354		721	Predicted bile acid beta-glucosidase [Carbohydrate	98.48
PF06824		424	DUF1237: Protein of unknown function (DUF1237); In	98.08
COG3459		1056	Cellobiose phosphorylase [Carbohydrate transport a	97.48
PF00723		448	Glyco_hydro_15: Glycosyl hydrolases family 15; Int	96.94
KOG2119\|consensus		879		96.94
COG3538		434	Uncharacterized conserved protein [Function unknow	96.64
cd00249		384	AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d	94.18
PF03632		370	Glyco_hydro_65m: Glycosyl hydrolase family 65 cent	93.04
PF07971		502	Glyco_hydro_92: Glycosyl hydrolase family 92; Inte	92.82
cd00249		384	AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d	92.51
PF07221		346	GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN	83.83

>PLN02567 alpha,alpha-trehalase	Back alignment and domain information

Probab=100.00  E-value=2.1e-144  Score=1183.49  Aligned_cols=511  Identities=40%  Similarity=0.725  Sum_probs=484.2

Q ss_pred             hhhhHhhCCCCCCCCccCCCCCCCCHHHHHHHHHHhhhCC--CCCChHHHHHHHHHhccC-CcccccCCCCCCCCCC-cc
Q psy3156           3 QKCKVIGNVFPNDSKSFVDLKLKQPEDVILAKFRALLTNN--ADPDTTTLTNFVNEYFEA-GNELQVWSPPDFTSNP-SI   78 (557)
Q Consensus         3 ~~~vq~~~~f~~dsKtfvD~~~~~~~~~~l~~f~~~~~~~--~~~~~~~l~~Fv~~~F~~-~~~~~~~~~~d~~~~p-~~   78 (557)
                      |++||+++ |+ ||||||||+||.+|++||++|+++....  +++++++|++||++||.+ |+||+.|+|+||+++| +|
T Consensus        19 l~~v~~~~-f~-DsKtfvD~~~~~~~~~~l~~f~~~~~~~~~~~~~~~~l~~Fv~~~F~~~g~~l~~~~~~d~~~~p~~~   96 (554)
T PLN02567         19 LASFGGED-TF-DPKLYVDLPLKFSLSETEKAFDALPRSNINGSVPVEELEEFVAEYFDVAGSDLLPYTPPDFVPEPPGF   96 (554)
T ss_pred             HhhhcccC-CC-CCCccCCCCCCCCHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCCcccccCCccccccCcHhH
Confidence            78999999 99 9999999999999999999999998654  467889999999999999 9999999999999999 79


Q ss_pred             ccccCCHHHHHHHHHHhHHHhhhccccccccccCCCCCcccccCCCcccCCCCCCcchhhHHHHHHHHHHhcCCchhHHH
Q psy3156          79 ENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARG  158 (557)
Q Consensus        79 ~~~i~d~~~~~~~~~i~~~W~~L~r~~~~~v~~~~~~~sli~lp~pfiVPggrF~e~yyWDSyfi~~GLl~s~~~~~a~~  158 (557)
                      +.+|.|+++|+|+.+||.+|+.|+|+++++|.++|+++||||||||||||||||||+||||||||++||+.|+|.++|++
T Consensus        97 l~~i~~~~~r~~a~~i~~lW~~L~R~~~~~v~~~~~~~sli~lp~p~iVPGgRFrE~yyWDSy~i~~GLl~s~~~~~A~~  176 (554)
T PLN02567         97 LPKVENPEAREWALKVHSLWKNLARKVSDSVEERPDRHTLLPLPNPVVVPGSRFREVYYWDSYWVIRGLLASKMYETAKG  176 (554)
T ss_pred             hhhcCChHHHHHHHHHHHHHHHhccccCcccccCCCcCCcccCCCCeEccCCCcCccchHHHHHHHHHHHhCCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhcCCCCCCccccccCCCCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHccc-cccc-cCCcee
Q psy3156         159 VIENIISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHM-VTVE-KNGKYY  236 (557)
Q Consensus       159 ~i~nf~~~i~~~G~IPng~r~yy~~rSQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~R~-~~~~-~~G~~~  236 (557)
                      ||+||+++|+++||||||+|+||++|||||+|++||++|+++++|++||++++|+|++||+|||++|+ +.+. .+|..+
T Consensus       177 mi~Nf~~~i~~~GfIPNg~R~Yyl~RSQPPlla~mV~~~~~~t~d~~~l~~~lp~L~~E~~~W~~~~~~v~i~~~~g~~~  256 (554)
T PLN02567        177 VVENLLYLVDTYGFVPNGARAYYTNRSQPPLLSAMVLAVYAATKDVELVRRALPALLKEHAFWTSGRHTVTIRDANGVVH  256 (554)
T ss_pred             HHHHHHHHHHHcCcCCCCCcccccCCCCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhcCCcceeeecCCCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999754 4443 357777


Q ss_pred             eeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHH
Q psy3156         237 TMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLN  316 (557)
Q Consensus       237 ~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLN  316 (557)
                      +|+||++...+||||||++|+.++...+++++++++|++|+++||||||||+||+.  +   ..+|.+|+|++|+|||||
T Consensus       257 ~L~rY~~~~~~PrpEsyreD~~~a~~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~--~---~~~l~ti~t~~i~pVDLN  331 (554)
T PLN02567        257 VLSRYYAMWDKPRPESSRIDKEVASKFSSSSEKQQLYRDIASAAESGWDFSSRWMR--D---GSNLTTLRTTSILPVDLN  331 (554)
T ss_pred             CCcccccCCCCCCCccccccHHHHhcCCCchHHHHHHHHHHHHHHcCCCchhhhcc--c---cccccccccccccCccHH
Confidence            89999999999999999999999988887788999999999999999999999995  2   377999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcc-------------cccccccc
Q psy3156         317 AILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKP-------------RNYFYVSN  383 (557)
Q Consensus       317 a~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~-------------~~~~~~s~  383 (557)
                      ||||+++++||+|++.+|+.++|++|+++|++++++|+++|||+++|+|+|||+.+++.             +..+++++
T Consensus       332 a~L~~~e~~LA~la~~lG~~~~a~~~~~~A~~~~~aI~~~lWdee~G~y~Dydl~~~~~~~~~~~~~~~~~~~~~~~~s~  411 (554)
T PLN02567        332 AFLLKMELDIAFFAKLLGDKATAERFLKAAKARKRAINAVLWNEEMGQWLDYWLPPNGATCQESYTWDAENQNTNVYASN  411 (554)
T ss_pred             HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhcCcccCeEEeeccccccccccccccccccccccCccHHH
Confidence            99999999999999999999999999999999999999999999999999999988753             37889999


Q ss_pred             hHHHhhccCCCChHHHHHHHHHHHhccccccccCccccCCccccccCCCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHH
Q psy3156         384 ITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQV  463 (557)
Q Consensus       384 ~~PL~~g~~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~l  463 (557)
                      |+|||+|++++ .+.++.+++++|++++++.      |||||||+.++++|||+||+|||+|||+++||++||+.+|+++
T Consensus       412 f~PLw~g~~~~-~~~~a~~v~~~l~~~~l~~------pgGiptsl~~sg~qWdgPn~W~pl~~l~i~GL~~yG~~ea~~l  484 (554)
T PLN02567        412 FVPLWCGVVPP-GDAKVEKVVESLKSSGLVL------PAGIATSLRNTGQQWDFPNAWAPLQHMIVEGLAASGSKEGKAL  484 (554)
T ss_pred             HHHHHcCCCCh-hhHHHHHHHHHHHhccCcc------CCcccCCCCCccccCCCCCcCHhHHHHHHHHHHHcCChHHHHH
Confidence            99999999997 2347889999998777775      9999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhcCcccccccccccCCCCCCccccCCCCCcchHHHHHHHHHHHcccc
Q psy3156         464 AYRLAEKWLFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTI  527 (557)
Q Consensus       464 A~~la~r~l~~~~~~~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L~ll~~~~~~~  527 (557)
                      |++||+|||+++++.|.++|.|+||||+.++++.|+||||++|+||||||||+|+|+.+||..-
T Consensus       485 A~~la~rwl~~~~~~~~~tg~m~EkYd~~~~~~~GgGGey~~q~GFGWTngV~L~ll~~yg~~~  548 (554)
T PLN02567        485 AEDIARRWLRSNYVAYKKTGAMHEKYDARYCGEVGGGGEYIPQTGFGWSNGVVLSLLEEFGWPE  548 (554)
T ss_pred             HHHHHHHHHHHHHHHHHhcCceEEeECCCCccccCCCCCCCCCCCcChHHHHHHHHHHHhCCcc
Confidence            9999999999999999999999999999999999999999999999999999999999999753

>PRK13271 treA trehalase; Provisional	Back alignment and domain information

>PRK13270 treF trehalase; Provisional	Back alignment and domain information

>PRK13272 treA trehalase; Provisional	Back alignment and domain information

>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3	Back alignment and domain information

>KOG0602\|consensus	Back alignment and domain information

>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK10137 alpha-glucosidase; Provisional	Back alignment and domain information

>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3	Back alignment and domain information

>KOG2161\|consensus	Back alignment and domain information

>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT	Back alignment and domain information

>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative	Back alignment and domain information

>TIGR01531 glyc_debranch glycogen debranching enzymye	Back alignment and domain information

>TIGR01577 oligosac_amyl oligosaccharide amylase	Back alignment and domain information

>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes	Back alignment and domain information

>PLN03005 beta-fructofuranosidase	Back alignment and domain information

>PLN02703 beta-fructofuranosidase	Back alignment and domain information

>PLN02973 beta-fructofuranosidase	Back alignment and domain information

>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []	Back alignment and domain information

>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases	Back alignment and domain information

>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase	Back alignment and domain information

>KOG3625\|consensus	Back alignment and domain information

>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function	Back alignment and domain information

>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3	Back alignment and domain information

>KOG2119\|consensus	Back alignment and domain information

>COG3538 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid	Back alignment and domain information

>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3	Back alignment and domain information

>PF07971 Glyco_hydro_92: Glycosyl hydrolase family 92; InterPro: IPR012939 This domain occurs within alpha-1,2-mannosidases, which remove alpha-1,2-linked mannose residues from Man(9)(GlcNAc)(2) by hydrolysis	Back alignment and domain information

>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid	Back alignment and domain information

>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		557
2jg0_A		535	Family 37 Trehalase From Escherichia Coli In Comple		7e-60
2jf4_A		535	Family 37 Trehalase From Escherichia Coli In Comple		1e-55

>pdb|2JG0|A Chain A, Family 37 Trehalase From Escherichia Coli In Complex With 1- Thiatrehazolin Length = 535

Back alignment and structure

Iteration: 1

Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 166/523 (31%), Positives = 247/523 (47%), Gaps = 56/523 (10%) Query: 9 GNVFPNDSKSFVDLKLKQPEDVILAKFRALLTNNADPDTTTLTNFVNEYFEAGNELQVWS 68 +FP D K+F D +ILA +R + N + D L +FVN F E + + Sbjct: 24 AKLFP-DQKTFADAVPNSDPLMILADYR-MQQNQSGFD---LRHFVNVNFTLPKEGEKYV 78 Query: 69 PPDFTSNPSIENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIP 128 PP+ S ++ +W L R + + SL+ P + +P Sbjct: 79 PPEGQS---------------LREHIDGLWPVLTR----STENTEKWDSLLPLPEPYVVP 119 Query: 129 GGRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYLERSQPP 188 GGRFRE+YYWD+Y+ + G+ D ++ N +D +G +PNG R YYL RSQPP Sbjct: 120 GGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPP 179 Query: 189 LLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWM----------KRHMVTVEKNGKYYTM 238 M A++ GD ++ +L + E+ YWM + V ++G + Sbjct: 180 FFALMVELLAQHEGDA-ALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTL--L 236 Query: 239 ARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSN 298 RY+ PRPES+ ED A +Y +L++ A +GWDFSSRW N Sbjct: 237 NRYWDDRDTPRPESWVEDIATAKS-NPNRPATEIYRDLRSAAASGWDFSSRWM-----DN 290 Query: 299 RGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLW 358 L +RTTSI+PVDLN+++ L+ G+ ++ +Y+ +A + I + LW Sbjct: 291 PQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLW 350 Query: 359 NEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQ 418 N+Q G + DYD+K+ K RN + + PL YV TK + Sbjct: 351 NDQQGWYADYDLKSHKVRNQLTAAALFPL----------YVNAAAKDRANKMATATKTHL 400 Query: 419 VKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMG 478 ++ G T+ S QQWD PN WAPLQ +GL Q+ K+VA ++ +L Sbjct: 401 LQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGL---QNYGQKEVAMDISWHFLTNVQHT 457 Query: 479 YETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLN 521 Y+ K + EKYDV G G GGEY Q GFGWTNG ++L+ Sbjct: 458 YDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLD 500

PyMOL of 2jg0

>pdb|2JF4|A Chain A, Family 37 Trehalase From Escherichia Coli In Complex With Validoxylamine Length = 535

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		557
2jg0_A		535	Periplasmic trehalase; family 37, hydrolase, inhib	1e-130
3c68_A		761	Uncharacterized protein YGJK; GH63, processing alp	1e-51
2z07_A		420	Putative uncharacterized protein TTHA0978; unchara	1e-40
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04

>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A* Length = 535	Back alignment and structure

 Score =  388 bits (998), Expect = e-130
 Identities = 158/523 (30%), Positives = 243/523 (46%), Gaps = 52/523 (9%)

Query: 10  NVFPNDSKSFVDLKLKQPEDVILAKFRALLTNNADPDTTTLTNFVNEYFEAGNELQVWSP 69
            +FP D K+F D        +ILA +R       +     L +FVN  F    E + + P
Sbjct: 25  KLFP-DQKTFADAVPNSDPLMILADYRMQ----QNQSGFDLRHFVNVNFTLPKEGEKYVP 79

Query: 70  PDFTSNPSIENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPG 129
           P+                +     ++ +W  L R  +    +  +  SL+  P  + +PG
Sbjct: 80  PE---------------GQSLREHIDGLWPVLTRSTE----NTEKWDSLLPLPEPYVVPG 120

Query: 130 GRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYLERSQPPL 189
           GRFRE+YYWD+Y+ + G+      D    ++ N    +D +G +PNG R YYL RSQPP 
Sbjct: 121 GRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPF 180

Query: 190 LIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVT--------VEKNGKYYTMARY 241
              M    A++ GD   ++ +L  +  E+ YWM              V K      + RY
Sbjct: 181 FALMVELLAQHEGDA-ALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRY 239

Query: 242 YAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGG 301
           +     PRPES+ ED   A           +Y +L++ A +GWDFSSRW       N   
Sbjct: 240 WDDRDTPRPESWVEDIATAKSN-PNRPATEIYRDLRSAAASGWDFSSRWM-----DNPQQ 293

Query: 302 LKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQ 361
           L  +RTTSI+PVDLN+++      L+      G+  ++ +Y+ +A    + I + LWN+Q
Sbjct: 294 LNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQ 353

Query: 362 VGVWLDYDIKNKKPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKF 421
            G + DYD+K+ K RN    + + PL+  +     +  A ++    +        + ++ 
Sbjct: 354 QGWYADYDLKSHKVRNQLTAAALFPLYVNAA---AKDRANKMATATK-------THLLQP 403

Query: 422 YGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYET 481
            G  T+   S QQWD PN WAPLQ    +     Q+   K+VA  ++  +L      Y+ 
Sbjct: 404 GGLNTTSVKSGQQWDAPNGWAPLQWVATE---GLQNYGQKEVAMDISWHFLTNVQHTYDR 460

Query: 482 SKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYG 524
            K + EKYDV   G  G GGEY  Q GFGWTNG   ++L+   
Sbjct: 461 EKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLIC 503

PyMOL of 2jg0

>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Length = 420	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		557
2jg0_A		535	Periplasmic trehalase; family 37, hydrolase, inhib	100.0
2z07_A		420	Putative uncharacterized protein TTHA0978; unchara	100.0
3c68_A		761	Uncharacterized protein YGJK; GH63, processing alp	100.0
2okx_A		956	Rhamnosidase B; alpha barrel, glycoside hydrolase	99.92
3cih_A		739	Putative alpha-rhamnosidase; structural genomics,	99.85
1v7w_A		807	Chitobiose phosphorylase; beta-sandwich, (alpha/al	99.84
3qde_A		811	Cellobiose phosphorylase; cellulase, phosphate, tr	99.76
3rrs_A		822	Cellobiose phosphorylase; GH94, alpha barrel, disa	99.75
1ulv_A		1020	Glucodextranase; GH family 15, (alpha-alpha)6-barr	99.36
1lf6_A		684	Glucoamylase; (alpha/alpha) barrel, 6 alpha-helica	99.34
2p0v_A		489	Hypothetical protein BT3781; alpha-beta protein, s	98.88
2fba_A		492	Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hy	98.8
2vn4_A		599	Glucoamylase; hydrolase, carbohydrate binding, gly	98.7
3qt9_A		427	Putative uncharacterized protein CPE0426; alpha-al	98.57
3p2c_A		463	Putative glycosyl hydrolase; structural genomics,	98.56
1gai_A		472	Glucoamylase-471; hydrolase, glycosidase, polysacc	98.52
3qry_B		426	Putative uncharacterized protein; alpha-alpha six	98.29
2ww2_A		737	Mannosidase, alpha-1,2-mannosidase; hydrolase, gly	94.2
2wvx_A		744	Mannosidase, putative alpha-1,2-mannosidase; glyco	93.38
3gt5_A		402	N-acetylglucosamine 2-epimerase; structural genomi	92.71
2xsg_A		774	Ccman5; hydrolase, mannosidase; HET: B3P; 2.00A {C	91.53
1h54_A		754	Maltose phosphorylase; hydrolase, maltose metaboli	90.55
2rdy_A		803	BH0842 protein; PSI-II, structural genomics, prote	89.14
2gz6_A		388	N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C	84.36
2zbl_A		421	Putative isomerase; N-acyl-D-glucosamine 2-epimera	84.1
3gt5_A		402	N-acetylglucosamine 2-epimerase; structural genomi	82.62

>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*	Back alignment and structure

Probab=100.00  E-value=1.2e-112  Score=939.39  Aligned_cols=497  Identities=31%  Similarity=0.558  Sum_probs=444.9

Q ss_pred             hhhhHhhCCCCCCCCccCCCCCCCCHHHHHHHHHHhhhCCCCCChHHHHHHHHHhccC-CcccccCCCCCCCCCCccccc
Q psy3156           3 QKCKVIGNVFPNDSKSFVDLKLKQPEDVILAKFRALLTNNADPDTTTLTNFVNEYFEA-GNELQVWSPPDFTSNPSIENK   81 (557)
Q Consensus         3 ~~~vq~~~~f~~dsKtfvD~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~Fv~~~F~~-~~~~~~~~~~d~~~~p~~~~~   81 (557)
                      |++||+++||+ ||||||||+||.+|++||++|++++..    ++++|++||++||.. |.+ +.     |+++|     
T Consensus        18 ~~~vq~~~~f~-d~k~fvd~~~~~~~~~~~~~~~~~~~~----~~~~l~~fv~~~f~~~~~~-~~-----~~~~~-----   81 (535)
T 2jg0_A           18 FNDVQNAKLFP-DQKTFADAVPNSDPLMILADYRMQQNQ----SGFDLRHFVNVNFTLPKEG-EK-----YVPPE-----   81 (535)
T ss_dssp             HHHHHHTTCSS-SHHHHHTCEESSCHHHHHHHHHHHTTS----TTCCHHHHHHHHEECCC----------CCCCT-----
T ss_pred             HHHHHHccCCC-CCCcCCCCcCCCCHHHHHHHHHHhhcC----cHHHHHHHHHHhcCCCCcc-cc-----CCCCc-----
Confidence            79999999999 999999999999999999999998753    468999999999998 764 33     44433     


Q ss_pred             cCCHHHHHHHHHHhHHHhhhccccccccccCCCCCcccccCCCcccCCCCCCcchhhHHHHHHHHHHhcCCchhHHHHHH
Q psy3156          82 ISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIE  161 (557)
Q Consensus        82 i~d~~~~~~~~~i~~~W~~L~r~~~~~v~~~~~~~sli~lp~pfiVPggrF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~  161 (557)
                        +   +.|+++||++|+.|+|+++    .+|+++||||||+|||||||||+++|||||+|+++||+.+|++++|++||+
T Consensus        82 --~---~~~~~~i~~~W~~l~r~~~----~~~~~~sli~~p~~~vvPGg~F~~~~~WDs~f~~~gLl~~~~~~~A~~~l~  152 (535)
T 2jg0_A           82 --G---QSLREHIDGLWPVLTRSTE----NTEKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKVADMVA  152 (535)
T ss_dssp             --T---CCHHHHHHHHTTTTEECCS----SCCTTCSBCCCSSCEECCBTTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred             --h---HHHHHHHHHHHHHHcCCCC----CCCCccccccCCCCcccCCccccccchHHHHHHHHHHHHcCCHHHHHHHHH
Confidence              2   3467899999999999987    578999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhcCCCCCCccccccCCCCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHccccc----------ccc
Q psy3156         162 NIISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVT----------VEK  231 (557)
Q Consensus       162 nf~~~i~~~G~IPng~r~yy~~rSQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~R~~~----------~~~  231 (557)
                      ||+++|+++|+||||+|+||++|||||+|++||.+|++.+++ +||++++|.|+++|+||+++|+..          ...
T Consensus       153 ~~~~~~~~~G~IPng~r~yY~~~sqPPl~~~~v~~~~~~~~~-~fL~~~~p~L~~~~~ww~~~~~~~~~g~~~~~~~~~~  231 (535)
T 2jg0_A          153 NFAHEIDTYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQ  231 (535)
T ss_dssp             HHHHHHHHHSSCCSBSBGGGTTCCCSCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHTTTCTTCCTTEEETTEEECT
T ss_pred             HHHHhhccCCcccCCCCccCCCCCCccHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHhCCcccCccccccceeecC
Confidence            999999999999999999999999999999999999999875 999999999999999999988620          112


Q ss_pred             CCceeeeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCccccccccc
Q psy3156         232 NGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSII  311 (557)
Q Consensus       232 ~G~~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~  311 (557)
                      +|  ++|++|++....||||||++|+.++..+. +++++.+|+++++++|||||||+||+.  +   .++|.++++.+|+
T Consensus       232 ~G--~~l~~y~~~~~~prpesyr~d~~~~~~~~-~~~~~~~y~~~~~~~eSGwD~s~R~~~--~---~~~l~~~~t~~i~  303 (535)
T 2jg0_A          232 DG--TLLNRYWDDRDTPRPESWVEDIATAKSNP-NRPATEIYRDLRSAAASGWDFSSRWMD--N---PQQLNTLRTTSIV  303 (535)
T ss_dssp             TS--CEEECCCCSCCSCCGGGHHHHHHHHHTCT-TSCHHHHHHHHHHHHHTTCCSCGGGBS--S---TTCGGGBCGGGEE
T ss_pred             CC--CcceeeccCCCCCCCcceeehhhhhhccc-cchhHHHHHHHHHHHhCCCCCccccCC--C---CCcccccCCccch
Confidence            45  37999999999999999999999987553 556889999999999999999999985  2   3788889999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcccccccccchHHHhhcc
Q psy3156         312 PVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLS  391 (557)
Q Consensus       312 pVDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~~~~~~~s~~~PL~~g~  391 (557)
                      ||||||+||.+++.||+||+++|+.+.|++|+++|++++++|+++|||++.|+|+||++.++++++++++++++|||+|+
T Consensus       304 ~VDlnA~ly~a~~~la~lA~~lG~~~~a~~~~~~A~~lk~ai~~~fWdee~G~y~D~~~~~~~~~~~~~~s~~~PL~~gi  383 (535)
T 2jg0_A          304 PVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHKVRNQLTAAALFPLYVNA  383 (535)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEETTTTEECCCCBGGGGHHHHTTC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcCCCCCEEEEEeCCCCCEeeeehhhhHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHHhccccccccCccccCCccccccCCCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy3156         392 YKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKW  471 (557)
Q Consensus       392 ~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~  471 (557)
                      +++   +++++|+++|. .++++      ++||+|+..++++|||+||||||+|+++++||++||+.   ++|.+|+++|
T Consensus       384 ~~~---e~a~~v~~~l~-~~l~t------~~GlrT~s~~s~~yW~GpNvW~~~~~l~i~gL~~yG~~---~~A~~la~~~  450 (535)
T 2jg0_A          384 AAK---DRANKMATATK-THLLQ------PGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQK---EVAMDISWHF  450 (535)
T ss_dssp             SCH---HHHHHHHHHHH-HHTEE------TTEECSBSCCCSSSSSTTEECHHHHHHHHHHHHTTTCH---HHHHHHHHHH
T ss_pred             CCH---HHHHHHHHHHH-HHhcc------CCCCCCCcCCCccccCCCCcchhHHHHHHHHHHHcCCH---HHHHHHHHHH
Confidence            998   89999999998 46776      99999977889999999999999999999999999998   5999999999


Q ss_pred             HHHHHhhhhhcCcccccccccccCCCCCCccccCCCCCcchHHHHHHHHHHHccccCCCCchhhhhhhccCCCcc
Q psy3156         472 LFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTISFNNTQELIEQENASGESD  546 (557)
Q Consensus       472 l~~~~~~~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  546 (557)
                      +.++.++|.++|.|+|+||+.++++.|+||||++|.+|||||||+|+|+.+||+++++++....+....+.|+.+
T Consensus       451 l~~~~~~~~~~G~l~E~yd~~~~~~~G~ggeY~~~~~fgWT~av~l~ll~~y~~~~~~~~~~~~~~~~~~~~~~~  525 (535)
T 2jg0_A          451 LTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQPCDNVPATRPTVKSATTQ  525 (535)
T ss_dssp             HHHHHHHHHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHHHHHHHSCSSSCCSSCCSSCC--------
T ss_pred             HHHHHHHhccCCeeeeeECCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhccCCcccccccccccCccCC
Confidence            999999999999999999999888888889999999999999999999999999887655554444445555544

PyMOL of 2jg0

>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}	Back alignment and structure

>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}	Back alignment and structure

>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}	Back alignment and structure

>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*	Back alignment and structure

>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}	Back alignment and structure

>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*	Back alignment and structure

>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*	Back alignment and structure

>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*	Back alignment and structure

>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8	Back alignment and structure

>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A	Back alignment and structure

>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*	Back alignment and structure

>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A	Back alignment and structure

>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*	Back alignment and structure

>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*	Back alignment and structure

>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*	Back alignment and structure

>2ww2_A Mannosidase, alpha-1,2-mannosidase; hydrolase, glycoside hydrolase family 92, BT2199; HET: SWA; 1.90A {Bacteroides thetaiotaomicron} PDB: 2wvy_A*	Back alignment and structure

>2wvx_A Mannosidase, putative alpha-1,2-mannosidase; glycoside hydrolase family 92, GH92, hydrolase, BT3990; HET: MSE; 1.90A {Bacteroides thetaiotaomicron} PDB: 2wvz_A* 2ww0_A* 2ww1_A* 2ww3_A* 2wvx_B* 2wzs_A*	Back alignment and structure

>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}	Back alignment and structure

>2xsg_A Ccman5; hydrolase, mannosidase; HET: B3P; 2.00A {Cellulosimicrobium cellulans}	Back alignment and structure

>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3	Back alignment and structure

>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}	Back alignment and structure

>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}	Back alignment and structure

>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*	Back alignment and structure

>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		557
d2jg0a1		511	a.102.1.9 (A:37-547) Periplasmic trehalase TreA {E	1e-139

>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]} Length = 511	Back information, alignment and structure


class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Trehalase-like
domain: Periplasmic trehalase TreA
species: Escherichia coli [TaxId: 562]

 Score =  410 bits (1055), Expect = e-139
 Identities = 159/520 (30%), Positives = 236/520 (45%), Gaps = 53/520 (10%)

Query: 14  NDSKSFVDLKLKQPEDVILAKFRALLTNNADPDTTTLTNFVNEYFEAGNELQVWSPPDFT 73
            D K+F D        +ILA +R       +     L +FVN  F    E + + PP+  
Sbjct: 22  PDQKTFADAVPNSDPLMILADYRMQ----QNQSGFDLRHFVNVNFTLPKEGEKYVPPEG- 76

Query: 74  SNPSIENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFR 133
                         +     ++ +W  L R  +       +  SL+  P  + +PGGRFR
Sbjct: 77  --------------QSLREHIDGLWPVLTRSTENT----EKWDSLLPLPEPYVVPGGRFR 118

Query: 134 ELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYLERSQPPLLIPM 193
           E+YYWD+Y+ + G+      D    ++ N    +D +G +PNG R YYL RSQPP    M
Sbjct: 119 EVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALM 178

Query: 194 AASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVT--------VEKNGKYYTMARYYAPS 245
               A++ GD   ++ +L  +  E+ YWM              V K      + RY+   
Sbjct: 179 VELLAQHEGDA-ALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDR 237

Query: 246 RGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYI 305
             PRPES+ ED    A          +Y +L++ A +GWDFSSRW       N   L  +
Sbjct: 238 DTPRPESWVEDI-ATAKSNPNRPATEIYRDLRSAAASGWDFSSRWM-----DNPQQLNTL 291

Query: 306 RTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVW 365
           RTTSI+PVDLN+++      L+      G+  ++ +Y+ +A    + I + LWN+Q G +
Sbjct: 292 RTTSIVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWY 351

Query: 366 LDYDIKNKKPRNYFYVSNITPLWT-LSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGT 424
            DYD+K+ K RN    + + PL+   + K     +A     +L               G 
Sbjct: 352 ADYDLKSHKVRNQLTAAALFPLYVNAAAKDRANKMATATKTHLLQP-----------GGL 400

Query: 425 PTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKA 484
            T+   S QQWD PN WAPLQ    +GL        K+VA  ++  +L      Y+  K 
Sbjct: 401 NTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHTYDREKK 457

Query: 485 MFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYG 524
           + EKYDV   G  G GGEY  Q GFGWTNG   ++L+   
Sbjct: 458 LVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLIC 497

PyMOL of d2jg0a1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		557
d2jg0a1		511	Periplasmic trehalase TreA {Escherichia coli [TaxI	100.0
d1v7wa1		531	Chitobiose phosphorylase ChbP {Vibrio proteolyticu	99.68
d1lf6a1		397	Bacterial glucoamylase, C-terminal domain {Thermoa	99.44
d1ulva1		413	Glucodextranase, domain A {Arthrobacter globiformi	99.08
d1gaia_		472	Glucoamylase {Aspergillus awamori, variant x100 [T	97.96
d2fbaa1		492	Glucoamylase {Yeast (Saccharomycopsis fibuligera)	97.88
d2nvpa1		426	Hypothetical protein CPF0428 {Clostridium perfring	97.88
d2p0va1		443	Hypothetical protein BT3781 {Bacteroides thetaiota	97.69
d1h54a1		485	Lactobacillus maltose phosphorylase, central domai	92.23
d2afaa1		411	Putative NAG isomerase YihS {Salmonella typhimuriu	83.89

>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Trehalase-like
domain: Periplasmic trehalase TreA
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.4e-126  Score=1040.89  Aligned_cols=487  Identities=32%  Similarity=0.568  Sum_probs=449.1

Q ss_pred             hhhhHhhCCCCCCCCccCCCCCCCCHHHHHHHHHHhhhCCCCCChHHHHHHHHHhccCCcccccCCCCCCCCCCcccccc
Q psy3156           3 QKCKVIGNVFPNDSKSFVDLKLKQPEDVILAKFRALLTNNADPDTTTLTNFVNEYFEAGNELQVWSPPDFTSNPSIENKI   82 (557)
Q Consensus         3 ~~~vq~~~~f~~dsKtfvD~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~Fv~~~F~~~~~~~~~~~~d~~~~p~~~~~i   82 (557)
                      |++||+++||+ ||||||||+||.+|++||++|+++..    .++++|++||++||....+++.|+|+||          
T Consensus        12 l~~vq~~~~~~-dsk~fvd~~~~~~~~~~~~~~~~~~~----~~~~~l~~f~~~~f~~~~~~~~~~~~~~----------   76 (511)
T d2jg0a1          12 FNDVQNAKLFP-DQKTFADAVPNSDPLMILADYRMQQN----QSGFDLRHFVNVNFTLPKEGEKYVPPEG----------   76 (511)
T ss_dssp             HHHHHHTTCSS-SHHHHHTCEESSCHHHHHHHHHHHTT----STTCCHHHHHHHHEECCC----CCCCTT----------
T ss_pred             HHHHHHhCCCC-CCCcccCCCCCCCHHHHHHHHHhhcC----CCHHHHHHHHHHhCCCCcccccCCCchH----------
Confidence            79999999999 99999999999999999999998864    3468899999999998778888888776          


Q ss_pred             CCHHHHHHHHHHhHHHhhhccccccccccCCCCCcccccCCCcccCCCCCCcchhhHHHHHHHHHHhcCCchhHHHHHHH
Q psy3156          83 SDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIEN  162 (557)
Q Consensus        83 ~d~~~~~~~~~i~~~W~~L~r~~~~~v~~~~~~~sli~lp~pfiVPggrF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~n  162 (557)
                           |+|+++||++|+.|+|+++.    +|+++||||||||||||||||+|+||||||||++||+.++|.++|++||+|
T Consensus        77 -----~~~~~~~~~~w~~l~r~~~~----~~~~~sli~~p~p~iVPGgrF~e~yyWDSyfi~lGLl~~~~~~~a~~ml~n  147 (511)
T d2jg0a1          77 -----QSLREHIDGLWPVLTRSTEN----TEKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKVADMVAN  147 (511)
T ss_dssp             -----CCHHHHHHHHTTTTEECCSS----CCTTCSBCCCSSCEECCBTTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHhccCCCC----CCCCCceeeCCCCeeCCCCCcCcccchHHHHHHHHHHhCCcHHHHHHHHHH
Confidence                 46899999999999999864    468899999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhcCCCCCCccccccCCCCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHcccccc--------ccCCc
Q psy3156         163 IISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTV--------EKNGK  234 (557)
Q Consensus       163 f~~~i~~~G~IPng~r~yy~~rSQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~R~~~~--------~~~G~  234 (557)
                      |+++|+++||||||+|+||++|||||+|++||++|+++++| ++|++++|.|+++|.||+++++...        ...++
T Consensus       148 f~~~i~~~G~IPng~r~yy~~rSQPPlla~mv~~~~~~t~D-~~L~~~lp~L~~e~~~W~~~~~~~~~~~~~~~~~~~~~  226 (511)
T d2jg0a1         148 FAHEIDTYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQD  226 (511)
T ss_dssp             HHHHHHHHSSCCSBSBGGGTTCCCSCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHTTTCTTCCTTEEETTEEECTT
T ss_pred             HHHHHHhCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHhcCCcccCCCceeeeecCCC
Confidence            99999999999999999999999999999999999999998 7899999999999999999866321        11223


Q ss_pred             eeeeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchh
Q psy3156         235 YYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVD  314 (557)
Q Consensus       235 ~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVD  314 (557)
                      .+.++||++...+||||||++|+.++.... ..++.++|+++++++|||||+|+||+.     ++..+.+++++.|+|||
T Consensus       227 g~~l~ry~~~~~~prpEsyr~D~~~a~~~~-~~~~~~~y~~l~s~~ESGwD~S~Rw~~-----~~~~l~~~~t~~i~pVD  300 (511)
T d2jg0a1         227 GTLLNRYWDDRDTPRPESWVEDIATAKSNP-NRPATEIYRDLRSAAASGWDFSSRWMD-----NPQQLNTLRTTSIVPVD  300 (511)
T ss_dssp             SCEEECCCCSCCSCCGGGHHHHHHHHHTCT-TSCHHHHHHHHHHHHHTTCCSCGGGBS-----STTCGGGBCGGGEECHH
T ss_pred             CccccccccccCCCCchhhhhhhhhhhccc-chhHHHHHHHHHHHHhccCCccccccC-----Chhhhcccccccccccc
Confidence            358999999999999999999999987764 456778999999999999999999985     34788899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcccccccccchHHHhhccCCC
Q psy3156         315 LNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLSYKF  394 (557)
Q Consensus       315 LNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~~~~~~~s~~~PL~~g~~~~  394 (557)
                      |||+||.++++|+.+|+++|+.++|.+|+++|++++++|+++|||+++|+|+|||+.+++++..+++++++|||+|++++
T Consensus       301 LNsll~~~~~~La~la~~lg~~~~a~~~~~~a~~~~~ai~~~lWd~e~g~~~Dyd~~~~~~~~~~~~~~~~PL~~g~~~~  380 (511)
T d2jg0a1         301 LNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHKVRNQLTAAALFPLYVNAAAK  380 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEETTTTEECCCCBGGGGHHHHTTCSCH
T ss_pred             HHHHHHHHHHHHHHHHHHhcchHhHHHHHHHHHHHHHHHHHHhccCccCeeEEEecCCCCEEeeeccchhhHhhccCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ChHHHHHHHHHHHhccccccccCccccCCccccccCCCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Q psy3156         395 SKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFT  474 (557)
Q Consensus       395 ~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~  474 (557)
                         ++++++++++.+ .++      ++|||||++.++++|||+||||||+|||+++||++||+.   ++|.+||++||++
T Consensus       381 ---~~~~~~~~~l~~-~~~------~~gGipt~~~~~~~yWrgPnvW~p~n~lii~gL~~yG~~---e~A~~la~~~l~~  447 (511)
T d2jg0a1         381 ---DRANKMATATKT-HLL------QPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQK---EVAMDISWHFLTN  447 (511)
T ss_dssp             ---HHHHHHHHHHHH-HTE------ETTEECSBSCCCSSSSSTTEECHHHHHHHHHHHHTTTCH---HHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHH-hhc------cCCCcCCCCCCCCCCCCCCCcCHhHHHHHHHHHHHcCCH---HHHHHHHHHHHHH
Confidence               899999999874 455      499999999999999999999999999999999999998   5999999999999


Q ss_pred             HHhhhhhcCcccccccccccCCCCCCccccCCCCCcchHHHHHHHHHHHccccCCCCch
Q psy3156         475 NYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTISFNNTQ  533 (557)
Q Consensus       475 ~~~~~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L~ll~~~~~~~~~~~~~  533 (557)
                      +.++|.++|.|+||||+.+++.+|+||||++|+||||||||+|+||+.||.+++++++.
T Consensus       448 ~~~~~~~tg~~~EkYd~~~~g~~G~ggey~~q~gFGWTngv~L~ll~~~~~~~~~~~~~  506 (511)
T d2jg0a1         448 VQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQPCDNV  506 (511)
T ss_dssp             HHHHHHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHHHHHHHSCSSSCCSSC
T ss_pred             HHHHhhhCCceEEeeCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHhhCccccCCCCC
Confidence            99999999999999999999999999999999999999999999999999998887653

PyMOL of d2jg0a1

>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]}	Back information, alignment and structure

>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]}	Back information, alignment and structure

>d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]}	Back information, alignment and structure

>d1gaia_ a.102.1.1 (A:) Glucoamylase {Aspergillus awamori, variant x100 [TaxId: 105351]}	Back information, alignment and structure

>d2fbaa1 a.102.1.1 (A:1-492) Glucoamylase {Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]}	Back information, alignment and structure

>d2nvpa1 a.102.1.8 (A:2-427) Hypothetical protein CPF0428 {Clostridium perfringens [TaxId: 1502]}	Back information, alignment and structure

>d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781 {Bacteroides thetaiotaomicron [TaxId: 818]}	Back information, alignment and structure

>d1h54a1 a.102.1.4 (A:269-753) Lactobacillus maltose phosphorylase, central domain {Lactobacillus brevis [TaxId: 1580]}	Back information, alignment and structure

>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure