Psyllid ID: psy3203


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
MVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFIKEESPQTK
cHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccHHHHHHHHHHHHccccccccHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccc
cHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHccHHHHHcccHHHHHHHccHHHHHHHHHHHHHHHHccccccccccc
mvklgllstpyfednatthflSSLTAGAIATTMTQPLDVLKTramnatpgqfnSMWALVTYTAklgpagffkgyfpafvrlapQTILTFVFLEQLRLNFgfikeespqtk
MVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFgfikeespqtk
MVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFIKEESPQTK
****GLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFI********
MVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNAT*GQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLN************
MVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFI********
MVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFIK*******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFIKEESPQTK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query110 2.2.26 [Sep-21-2011]
Q9QZD8287 Mitochondrial dicarboxyla yes N/A 0.863 0.331 0.572 1e-24
Q9UBX3287 Mitochondrial dicarboxyla yes N/A 0.863 0.331 0.562 1e-24
P56499308 Mitochondrial uncoupling no N/A 0.972 0.347 0.390 3e-16
P56501308 Mitochondrial uncoupling no N/A 0.972 0.347 0.381 6e-15
P04633307 Mitochondrial brown fat u no N/A 0.863 0.309 0.418 6e-15
P55916312 Mitochondrial uncoupling no N/A 0.972 0.342 0.381 1e-14
Q9W725310 Mitochondrial uncoupling N/A N/A 0.872 0.309 0.391 3e-14
O97649308 Mitochondrial uncoupling yes N/A 0.972 0.347 0.363 3e-14
Q8K404307 Mitochondrial brown fat u N/A N/A 0.872 0.312 0.402 4e-14
P25874307 Mitochondrial brown fat u no N/A 0.863 0.309 0.387 4e-14
>sp|Q9QZD8|DIC_MOUSE Mitochondrial dicarboxylate carrier OS=Mus musculus GN=Slc25a10 PE=2 SV=2 Back     alignment and function desciption
 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 1/96 (1%)

Query: 6   LLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKL 65
           +LST Y  DN  THF+SS  AG  AT + QPLDVLKTR MN + G++  ++     TAKL
Sbjct: 188 VLSTGYLSDNIFTHFVSSFIAGGCATFLCQPLDVLKTRLMN-SKGEYQGVFHCAMETAKL 246

Query: 66  GPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGF 101
           GP  FFKG FPA +RL P T+LTF+FLEQLR +FG 
Sbjct: 247 GPQAFFKGLFPAGIRLIPHTVLTFMFLEQLRKHFGI 282




Involved in translocation of malonate, malate and succinate in exchange for phosphate, sulfate, sulfite or thiosulfate across mitochondrial inner membrane.
Mus musculus (taxid: 10090)
>sp|Q9UBX3|DIC_HUMAN Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2 Back     alignment and function description
>sp|P56499|UCP3_RAT Mitochondrial uncoupling protein 3 OS=Rattus norvegicus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|P56501|UCP3_MOUSE Mitochondrial uncoupling protein 3 OS=Mus musculus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|P04633|UCP1_RAT Mitochondrial brown fat uncoupling protein 1 OS=Rattus norvegicus GN=Ucp1 PE=1 SV=2 Back     alignment and function description
>sp|P55916|UCP3_HUMAN Mitochondrial uncoupling protein 3 OS=Homo sapiens GN=UCP3 PE=1 SV=1 Back     alignment and function description
>sp|Q9W725|UCP2_CYPCA Mitochondrial uncoupling protein 2 OS=Cyprinus carpio GN=ucp2 PE=2 SV=1 Back     alignment and function description
>sp|O97649|UCP3_PIG Mitochondrial uncoupling protein 3 OS=Sus scrofa GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|Q8K404|UCP1_DICGR Mitochondrial brown fat uncoupling protein 1 OS=Dicrostonyx groenlandicus GN=UCP1 PE=2 SV=1 Back     alignment and function description
>sp|P25874|UCP1_HUMAN Mitochondrial brown fat uncoupling protein 1 OS=Homo sapiens GN=UCP1 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query110
242010640 285 mitochondrial dicarboxylate carrier, put 0.936 0.361 0.805 4e-41
270011578 286 hypothetical protein TcasGA2_TC005615 [T 0.945 0.363 0.778 7e-41
189240286 287 PREDICTED: similar to K11G12.5 [Triboliu 0.945 0.362 0.778 7e-41
170054034 288 mitochondrial dicarboxylate carrier [Cul 0.954 0.364 0.771 2e-40
403183288 288 AAEL017508-PA [Aedes aegypti] gi|4031832 0.954 0.364 0.771 2e-40
312376953 290 hypothetical protein AND_11892 [Anophele 0.972 0.368 0.736 2e-39
193592105 289 PREDICTED: mitochondrial dicarboxylate c 0.927 0.352 0.794 2e-39
195451774 282 GK13938 [Drosophila willistoni] gi|19416 0.936 0.365 0.728 4e-39
156554514 294 PREDICTED: mitochondrial dicarboxylate c 0.909 0.340 0.78 1e-38
195036856 288 GH19040 [Drosophila grimshawi] gi|193894 0.990 0.378 0.688 2e-38
>gi|242010640|ref|XP_002426070.1| mitochondrial dicarboxylate carrier, putative [Pediculus humanus corporis] gi|212510092|gb|EEB13332.1| mitochondrial dicarboxylate carrier, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  171 bits (434), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 83/103 (80%), Positives = 90/103 (87%)

Query: 2   VKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTY 61
           VK  LLST  F DN TTHFLSS TAGAIATT+TQPLDVLKTRAMNA PG+F+SMW L+ Y
Sbjct: 183 VKTFLLSTNMFSDNLTTHFLSSSTAGAIATTLTQPLDVLKTRAMNAKPGEFSSMWQLILY 242

Query: 62  TAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFGFIKE 104
           TAKLGP GFFKGY PAFVRL PQTILTFVFLEQLR+NFGF+K+
Sbjct: 243 TAKLGPLGFFKGYIPAFVRLGPQTILTFVFLEQLRINFGFVKQ 285




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270011578|gb|EFA08026.1| hypothetical protein TcasGA2_TC005615 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|189240286|ref|XP_973010.2| PREDICTED: similar to K11G12.5 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|170054034|ref|XP_001862945.1| mitochondrial dicarboxylate carrier [Culex quinquefasciatus] gi|167874415|gb|EDS37798.1| mitochondrial dicarboxylate carrier [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|403183288|gb|EJY57985.1| AAEL017508-PA [Aedes aegypti] gi|403183289|gb|EJY57986.1| AAEL017508-PB [Aedes aegypti] Back     alignment and taxonomy information
>gi|312376953|gb|EFR23900.1| hypothetical protein AND_11892 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|193592105|ref|XP_001949480.1| PREDICTED: mitochondrial dicarboxylate carrier-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|195451774|ref|XP_002073070.1| GK13938 [Drosophila willistoni] gi|194169155|gb|EDW84056.1| GK13938 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|156554514|ref|XP_001605171.1| PREDICTED: mitochondrial dicarboxylate carrier-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|195036856|ref|XP_001989884.1| GH19040 [Drosophila grimshawi] gi|193894080|gb|EDV92946.1| GH19040 [Drosophila grimshawi] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query110
FB|FBgn0027610280 Dic1 "Dicarboxylate carrier 1" 0.890 0.35 0.734 2.7e-36
WB|WBGene00019656290 K11G12.5 [Caenorhabditis elega 0.909 0.344 0.59 9.1e-29
MGI|MGI:1353497287 Slc25a10 "solute carrier famil 0.854 0.327 0.578 8.7e-24
RGD|621430286 Slc25a10 "solute carrier famil 0.854 0.328 0.589 1.1e-23
UNIPROTKB|B4E1E9244 SLC25A10 "cDNA FLJ61034, highl 0.9 0.405 0.564 1.8e-23
UNIPROTKB|Q9UBX3287 SLC25A10 "Mitochondrial dicarb 0.9 0.344 0.564 1.8e-23
UNIPROTKB|B4DLN1442 SLC25A10 "Uncharacterized prot 0.9 0.223 0.564 4.1e-23
UNIPROTKB|H9KUU7442 LOC100848134 "Uncharacterized 0.9 0.223 0.554 5.5e-22
UNIPROTKB|F1MBS4297 LOC100848134 "Uncharacterized 0.845 0.313 0.553 1.1e-21
UNIPROTKB|F6XRN5442 MRPL12 "Uncharacterized protei 0.854 0.212 0.547 1.2e-21
FB|FBgn0027610 Dic1 "Dicarboxylate carrier 1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 72/98 (73%), Positives = 83/98 (84%)

Query:     3 KLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYT 62
             K+ LL+TPYF+DN  THF +SL AG IATT+TQPLDVLKTR+MNA PG+FN +W +V +T
Sbjct:   180 KIYLLATPYFQDNLVTHFTASLVAGTIATTLTQPLDVLKTRSMNAKPGEFNGLWDIVKHT 239

Query:    63 AKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLRLNFG 100
             AKLGP GFFKGY PAFVRL P TI+TFVFLEQLRL FG
Sbjct:   240 AKLGPLGFFKGYVPAFVRLGPHTIITFVFLEQLRLKFG 277




GO:0005310 "dicarboxylic acid transmembrane transporter activity" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISS;IDA
GO:0022857 "transmembrane transporter activity" evidence=ISS
GO:0005740 "mitochondrial envelope" evidence=ISS
GO:0015709 "thiosulfate transport" evidence=IDA
GO:0071423 "malate transmembrane transport" evidence=IDA
GO:0015131 "oxaloacetate transmembrane transporter activity" evidence=IDA
GO:0015116 "sulfate transmembrane transporter activity" evidence=IDA
GO:0015117 "thiosulfate transmembrane transporter activity" evidence=IDA
GO:0035435 "phosphate ion transmembrane transport" evidence=IDA
GO:0071422 "succinate transmembrane transport" evidence=IDA
GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA
GO:0015729 "oxaloacetate transport" evidence=IDA
GO:0008272 "sulfate transport" evidence=IDA
GO:0015141 "succinate transmembrane transporter activity" evidence=IDA
GO:0015140 "malate transmembrane transporter activity" evidence=IDA
WB|WBGene00019656 K11G12.5 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
MGI|MGI:1353497 Slc25a10 "solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|621430 Slc25a10 "solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|B4E1E9 SLC25A10 "cDNA FLJ61034, highly similar to Mitochondrial dicarboxylate carrier" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9UBX3 SLC25A10 "Mitochondrial dicarboxylate carrier" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|B4DLN1 SLC25A10 "Uncharacterized protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H9KUU7 LOC100848134 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1MBS4 LOC100848134 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F6XRN5 MRPL12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9QZD8DIC_MOUSENo assigned EC number0.57290.86360.3310yesN/A
Q9UBX3DIC_HUMANNo assigned EC number0.56250.86360.3310yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query110
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-16
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 68.8 bits (169), Expect = 1e-16
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 19  HFLSSLTAGAIATTMTQPLDVLKTRAMNATPG---QFNSMWALVTYTAKL-GPAGFFKGY 74
             L+   AGAIA T+T PLDV+KTR  ++  G   ++  +        K  G  G +KG 
Sbjct: 8   SLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYKGL 67

Query: 75  FPAFVRLAPQTILTFVFLEQLRLNFGFIK 103
            P  +R+AP   + F   E L+       
Sbjct: 68  LPNLLRVAPAAAIYFGTYETLKKLLLKKL 96


Length = 96

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 110
KOG0753|consensus317 99.9
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.89
KOG0759|consensus286 99.89
KOG0752|consensus320 99.87
KOG0752|consensus320 99.84
KOG0764|consensus 299 99.83
KOG0768|consensus323 99.83
KOG0764|consensus299 99.83
KOG0760|consensus302 99.82
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.82
KOG0757|consensus319 99.81
PTZ00169 300 ADP/ATP transporter on adenylate translocase; Prov 99.81
PTZ00168259 mitochondrial carrier protein; Provisional 99.81
KOG0760|consensus302 99.81
KOG0758|consensus297 99.79
PTZ00168259 mitochondrial carrier protein; Provisional 99.78
KOG0768|consensus323 99.78
KOG0758|consensus 297 99.77
KOG0751|consensus 694 99.77
KOG0756|consensus299 99.77
KOG0751|consensus694 99.77
KOG0754|consensus 294 99.77
KOG0753|consensus317 99.76
KOG0757|consensus319 99.74
KOG0762|consensus311 99.73
KOG0770|consensus 353 99.71
KOG0762|consensus 311 99.69
KOG0767|consensus 333 99.68
KOG0761|consensus 361 99.67
KOG0754|consensus294 99.67
KOG0769|consensus 308 99.67
KOG0761|consensus361 99.66
KOG0750|consensus304 99.65
KOG0759|consensus286 99.65
KOG0765|consensus333 99.64
KOG0766|consensus297 99.63
KOG0755|consensus320 99.63
KOG0036|consensus463 99.61
KOG0036|consensus 463 99.6
KOG0770|consensus 353 99.58
KOG0763|consensus301 99.55
KOG0767|consensus 333 99.54
KOG0750|consensus304 99.52
KOG0766|consensus 297 99.51
KOG0763|consensus 301 99.5
KOG0749|consensus 298 99.48
KOG0749|consensus298 99.47
KOG0765|consensus333 99.46
KOG0755|consensus 320 99.41
KOG0756|consensus299 99.38
KOG0769|consensus308 99.37
KOG2954|consensus427 99.21
KOG1519|consensus297 99.15
KOG2745|consensus 321 98.45
KOG2745|consensus321 98.37
KOG1519|consensus 297 97.95
KOG2954|consensus 427 93.2
>KOG0753|consensus Back     alignment and domain information
Probab=99.90  E-value=1.1e-24  Score=146.46  Aligned_cols=100  Identities=39%  Similarity=0.627  Sum_probs=94.7

Q ss_pred             hhhccccCCCCCCcHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHhcCC---CCcCcHHHHHHHHHHh-Cchhcccchhhh
Q psy3203           2 VKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATP---GQFNSMWALVTYTAKL-GPAGFFKGYFPA   77 (110)
Q Consensus         2 ~k~~l~~~~~~~~~~~~~~~~g~~a~~~~~~~~~P~d~ik~r~q~~~~---~~~~~~~~~~~~i~~~-G~~gly~G~~~~   77 (110)
                      +|+.+.+....+++...+++++.+||+++++++.|.||||+||++|+.   ..|++..||+.+++++ |+.+||||+.|+
T Consensus       211 ~K~~li~~~~l~Dn~~~HfvSs~~AGl~aai~s~P~DVVKTRmMNqp~g~~~~Ykgs~DC~~k~v~~EG~~AlYKGF~Ps  290 (317)
T KOG0753|consen  211 VKHTLIDNLDLEDNIPTHFVSSFCAGLAAAILSSPVDVVKTRMMNQPPGRGGLYKGSLDCLIKTVKNEGFFALYKGFIPS  290 (317)
T ss_pred             HHHHHHhccccccchHHHHHHHHHHHHHHHHhcCcHHHHHhhhccCCCCcCccccchHHHHHHHHHhcChHHHHcccccc
Confidence            578888888889999999999999999999999999999999999987   5799999999999999 999999999999


Q ss_pred             HhhHhHHHHHHHHHHHHHHHHhcc
Q psy3203          78 FVRLAPQTILTFVFLEQLRLNFGF  101 (110)
Q Consensus        78 ~~~~~~~~~~~~~~ye~~~~~~~~  101 (110)
                      ++|..|++.++|..||.+|++...
T Consensus       291 w~RlGpWnvifwvtyEQlrr~~g~  314 (317)
T KOG0753|consen  291 WLRLGPWNVIFWVTYEQLRRLLGA  314 (317)
T ss_pred             ceecCCeeeeeeeeHHHHHHHhcc
Confidence            999999999999999999998754



>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query110
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 7e-14
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 72.4 bits (176), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 3/110 (2%) Query: 1 MVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSM-WALV 59 ++K LL D+ HF S+ AG T + P+DV+KTR MN+ GQ++S + Sbjct: 187 LIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCAL 246 Query: 60 TYTAKLGPAGFFKGYFPAFVRLAPQTILTFVFLEQLR--LNFGFIKEESP 107 T K GP F+KG+ P+F+RL ++ FV EQL+ L + E+P Sbjct: 247 TMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQSREAP 296

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query110
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-35
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 2e-09
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-05
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-10
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 6e-10
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-08
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  121 bits (306), Expect = 2e-35
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 3/111 (2%)

Query: 2   VKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTY 61
           +K  LL      D+   HF S+  AG   T +  P+DV+KTR MN+  GQ++S       
Sbjct: 188 IKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALT 247

Query: 62  TAK-LGPAGFFKGYFPAFVRLAPQTILTFVFLEQLR--LNFGFIKEESPQT 109
             +  GP  F+KG+ P+F+RL    ++ FV  EQL+  L   +   E+P  
Sbjct: 248 MLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQSREAPFH 298


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query110
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.89
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.86
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 99.84
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 99.84
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=99.89  E-value=9.9e-24  Score=144.36  Aligned_cols=99  Identities=35%  Similarity=0.569  Sum_probs=88.4

Q ss_pred             hhccccCCCCCCcHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHhcCCCCcCcHHHHHHHHHHh-CchhcccchhhhHhhH
Q psy3203           3 KLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKL-GPAGFFKGYFPAFVRL   81 (110)
Q Consensus         3 k~~l~~~~~~~~~~~~~~~~g~~a~~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~i~~~-G~~gly~G~~~~~~~~   81 (110)
                      |+.+.+.....++.+..+++|++||++++++++|+|+||+|+|.+....|+++++|+++++++ |++|||||+.|+++|.
T Consensus       189 k~~l~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~  268 (303)
T 2lck_A          189 KDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRL  268 (303)
T ss_dssp             HHTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHH
T ss_pred             HHHHHhccCCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccccccCCHHHHHHHHHHHcChHHhhccHHHHHHHH
Confidence            444544433356778899999999999999999999999999998766799999999999999 9999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhcc
Q psy3203          82 APQTILTFVFLEQLRLNFGF  101 (110)
Q Consensus        82 ~~~~~~~~~~ye~~~~~~~~  101 (110)
                      +|.++++|.+||.+|+.+..
T Consensus       269 ~p~~~i~f~~ye~~k~~l~~  288 (303)
T 2lck_A          269 GSWNVVMFVTYEQLKRALMA  288 (303)
T ss_dssp             HHHHHHHHHHHHHHHSCCCC
T ss_pred             HhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999988764



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 110
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 7e-06
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-05
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 40.9 bits (94), Expect = 7e-06
 Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 7/91 (7%)

Query: 11  YFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMN-----ATPGQFNSMWALVTYTAK- 64
               +    ++ + T  A+A  ++ P D ++ R M           +          AK 
Sbjct: 203 PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKD 262

Query: 65  LGPAGFFKGYFPAFVRLAPQTILTFVFLEQL 95
            GP  FFKG +   +R         V  +++
Sbjct: 263 EGPKAFFKGAWSNVLRGMGGAF-VLVLYDEI 292


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query110
d1okca_ 292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.8
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.8
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=99.80  E-value=1.4e-19  Score=120.87  Aligned_cols=91  Identities=22%  Similarity=0.288  Sum_probs=83.2

Q ss_pred             CcHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHhcCC-------CCcCcHHHHHHHHHHh-CchhcccchhhhHhhHhHHH
Q psy3203          14 DNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATP-------GQFNSMWALVTYTAKL-GPAGFFKGYFPAFVRLAPQT   85 (110)
Q Consensus        14 ~~~~~~~~~g~~a~~~~~~~~~P~d~ik~r~q~~~~-------~~~~~~~~~~~~i~~~-G~~gly~G~~~~~~~~~~~~   85 (110)
                      .+++..+++|++|++++.++++|+|+||+|+|++..       ..|+++++++++++++ |+++||+|+.+.+++.++..
T Consensus         4 ~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~   83 (292)
T d1okca_           4 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ   83 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhccc
Confidence            467889999999999999999999999999999753       3588999999999999 99999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccccc
Q psy3203          86 ILTFVFLEQLRLNFGFIKE  104 (110)
Q Consensus        86 ~~~~~~ye~~~~~~~~~~~  104 (110)
                      +++|.+||.+++.+.....
T Consensus        84 ~~~~~~~~~~~~~~~~~~~  102 (292)
T d1okca_          84 ALNFAFKDKYKQIFLGGVD  102 (292)
T ss_dssp             HHHHHHHHHHHHHHHTTCC
T ss_pred             chhHHHHHHHHHHHhcccc
Confidence            9999999999998876543



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure