Psyllid ID: psy3210

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270--
Protein Sequence
MGLKSQNLRSISIVTLKSRGLRPLCSQACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLLSSLFIVPPVRLSWSTTC
Secondary Structure (PSIPRED)
ccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccEEEEEccccccccccccEEEEEEEccEEEEEEEEEEccccccEEEEEcccccccHHHHHcccccccHHHHccccccccccccEEcccccccccccccccccccccccEEEEEEcccccccEEEEEEccEEEEEEccccccccccccccccccEEEcccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHEEEEEEEEcccEccccccccHHHHHcccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccHHHHHHHHHcccccEEEEEEccccccccccccEEEEEEEcccEEEEEEEEcccccccEEEEEcccHHccHHHHHHHHHHcccHHccccccccccccccccEEEEEEEcccccccccccccccEEEEEEccccccccEEEEEccEEEEEccccEEccccccHccccccEEEEEcccc
Coil and Loop (DISEMBL)
mglksqnlrsiSIVTlksrglrplcsqACYLAchkqciphtgrcgtgvplpamsprpplmdiagaaqplggnewtakswadheNLSEYLWFVGEMGREKATSLLEreadgtyllrirpqgpthpnetIYALSLKTDEKVKHMKVYEKemdgvpqyflsqSRYFRSIVELICCYERNSLIENFIGlnvrlqlpfRQIIAVaefdfcpteanqlplkqgcQVIVLSkegeqkgwwkgkIDERVSYFFQLYWGNFrllsslfivppvrlswsttc
Flexible Loop (DISEMBL)
mglksqnlrsisivtlksrglrPLCSQACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYllrirpqgpthpnETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSkegeqkgwwkgKIDERVSYFFQLYWGNFRLLSslfivppvrlswsttc
Low Complexity Region (SEG)
MGLKSQNLRSISIVTLKSRGLRPLCSQACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSkegeqkgwwkgkIDERVSYFFQLYWGNFRLLSSLFIVPPVRLSWSTTC
Disordered region (IsUnstruct)
**********ISIVTLKSRGLRPLCSQACYLACHKQCIPHTGRCGTGVPLP*********DIAGAAQPLGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRP******NETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLLSSLFIVPPVRLSW****
Disordered Region (DISOPRED)
*******LRSISIVTLKSRGLRPLCSQACYLAC***************************************************LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQ****PNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLLSSLFIVPPVRLSW****
Disordered Region (DISEMBL)
MGLKSQNLRSISIVTLKSRGLRPLCSQACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLLSSLFIVPPVRLSWSTTC
Disordered Region (DISPRO)
****SQNLRSISIVTLKSRGLRPLCSQACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLLSSLFIVPPVRLSWSTTC
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLKSQNLRSISIVTLKSRGLRPLCSQACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLLSSLFIVPPVRLSWSTTC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	272	2.2.26 [Sep-21-2011]
Q9NHV9	793	Protein vav OS=Drosophila	no	N/A	0.794	0.272	0.436	5e-47
P15498	845	Proto-oncogene vav OS=Hom	yes	N/A	0.558	0.179	0.335	2e-21
Q08DN7	844	Proto-oncogene vav OS=Bos	yes	N/A	0.558	0.180	0.335	2e-21
P27870	845	Proto-oncogene vav OS=Mus	yes	N/A	0.558	0.179	0.324	7e-21
P54100	843	Proto-oncogene vav OS=Rat	yes	N/A	0.558	0.180	0.329	2e-20
Q45FX5	1007	Protein vav-1 OS=Caenorha	yes	N/A	0.551	0.148	0.373	2e-20
Q9R0C8	847	Guanine nucleotide exchan	no	N/A	0.720	0.231	0.273	7e-17
Q60992	868	Guanine nucleotide exchan	no	N/A	0.632	0.198	0.260	9e-17
Q9UKW4	847	Guanine nucleotide exchan	no	N/A	0.720	0.231	0.273	9e-17
P52735	878	Guanine nucleotide exchan	no	N/A	0.632	0.195	0.252	9e-16

>sp|Q9NHV9|VAV_DROME Protein vav OS=Drosophila melanogaster GN=vav PE=2 SV=2

 Score =  187 bits (476), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/243 (43%), Positives = 140/243 (57%), Gaps = 27/243 (11%)

Query: 16  LKSRGLRPLCSQACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWT 75
           LK R  +    + C ++ HK CI  TGRC      P   P PP+ D              
Sbjct: 573 LKGRIHQGYRCKVCQISVHKGCISSTGRCKQN---PVSVP-PPVCD-------------- 614

Query: 76  AKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKT 135
                    LSE+ WF G M RE A   LE    GTYLLR+RPQGP+  +ET+YALSLKT
Sbjct: 615 -------RQLSEFNWFAGNMDRETAAHRLENRRIGTYLLRVRPQGPSTAHETMYALSLKT 667

Query: 136 DEKV-KHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR 194
           D+ V KHMK+ ++       Y LS  R+F++IVEL+  YERN L ENF GLN  LQ P++
Sbjct: 668 DDNVIKHMKINQENSGDSMLYCLSSRRHFKTIVELVSYYERNDLGENFAGLNQSLQWPYK 727

Query: 195 QIIAVAEFDFCPTE-ANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR 253
           ++IA A +D+ P   +NQL L+  CQV+V+ K+G+ KGWW+GKI + V YF + Y    +
Sbjct: 728 EVIATALYDYEPKAGSNQLQLRTDCQVLVIGKDGDSKGWWRGKIGDTVGYFPKEYVQEQK 787

Query: 254 LLS 256
           L S
Sbjct: 788 LAS 790

Couples tyrosine kinase signals with the activation of the Rho/Rac GTPases. Probably plays a pivotal role as a signal transducer protein during fruit fly development.
Drosophila melanogaster (taxid: 7227)

>sp|P15498|VAV_HUMAN Proto-oncogene vav OS=Homo sapiens GN=VAV1 PE=1 SV=4

 Score =  103 bits (256), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 101/179 (56%), Gaps = 27/179 (15%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
           ++LS +LW+ G M R  A S+L   +DGT+L+R R +         +A+S+K + +VKH+
Sbjct: 664 QDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAE-----FAISIKYNVEVKHI 718

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI------ 196
           K+    M     Y +++ + FR + EL+  Y++NSL + F  L+  LQ PF++       
Sbjct: 719 KI----MTAEGLYRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKEPEKRTIS 774

Query: 197 -----------IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
                       A A +DFC  + ++L LK+G  + +L+K+G+Q GWW+G+I  RV +F
Sbjct: 775 RPAVGSTKYFGTAKARYDFCARDRSELSLKEGDIIKILNKKGQQ-GWWRGEIYGRVGWF 832

Couples tyrosine kinase signals with the activation of the Rho/Rac GTPases, thus leading to cell differentiation and/or proliferation.

Homo sapiens (taxid: 9606)

>sp|Q08DN7|VAV_BOVIN Proto-oncogene vav OS=Bos taurus GN=VAV1 PE=2 SV=1

 Score =  103 bits (256), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 101/179 (56%), Gaps = 27/179 (15%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
           ++LS +LW+ G M R  A S+L   +DGT+L+R R +         +A+S+K + +VKH+
Sbjct: 663 QDLSVHLWYAGPMERAGAESILTNRSDGTFLVRQRVKDAAE-----FAISIKYNVEVKHI 717

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI------ 196
           K+    M     Y +++ + FR + EL+  Y++NSL + F  L+  LQ PF++       
Sbjct: 718 KI----MTAEGLYRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKEPERRAIN 773

Query: 197 -----------IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
                       A A +DFC  + ++L LK+G  V +L+K+G+Q GWW+G+I  R+ +F
Sbjct: 774 KPSAGSIKIFGTAKARYDFCARDRSELSLKEGDIVKILNKKGQQ-GWWRGEIYGRIGWF 831

Couples tyrosine kinase signals with the activation of the Rho/Rac GTPases, thus leading to cell differentiation and/or proliferation.

Bos taurus (taxid: 9913)

>sp|P27870|VAV_MOUSE Proto-oncogene vav OS=Mus musculus GN=Vav1 PE=1 SV=1

 Score =  101 bits (251), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 101/179 (56%), Gaps = 27/179 (15%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
           ++LS +LW+ G M R  A  +L   +DGTYL+R R +         +A+S+K + +VKH+
Sbjct: 664 QDLSVHLWYAGPMERAGAEGILTNRSDGTYLVRQRVKDTAE-----FAISIKYNVEVKHI 718

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI------ 196
           K+    M     Y +++ + FR ++EL+  Y++NSL + F  L+  LQ P+++       
Sbjct: 719 KI----MTSEGLYRITEKKAFRGLLELVEFYQQNSLKDCFKSLDTTLQFPYKEPERRAIS 774

Query: 197 -----------IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
                       A A +DFC  + ++L LK+G  + +L+K+G+Q GWW+G+I  R+ +F
Sbjct: 775 KPPAGSTKYFGTAKARYDFCARDRSELSLKEGDIIKILNKKGQQ-GWWRGEIYGRIGWF 832

Couples tyrosine kinase signals with the activation of the Rho/Rac GTPases, thus leading to cell differentiation and/or proliferation.

Mus musculus (taxid: 10090)

>sp|P54100|VAV_RAT Proto-oncogene vav OS=Rattus norvegicus GN=Vav1 PE=2 SV=1

 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 102/179 (56%), Gaps = 27/179 (15%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
           ++LS +LW+ G M R  A  +L   +DGTYL+R R +         +A+S+K + +VKH+
Sbjct: 662 QDLSVHLWYAGPMERAGAEGILTNRSDGTYLVRQRVKDTAE-----FAISIKYNVEVKHI 716

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI------ 196
           K+   E  G+  Y +++ + FR + EL+  Y++NSL + F  L+  LQ P+++       
Sbjct: 717 KIMTSE--GL--YRITEKKAFRGLPELVEFYQQNSLKDCFKSLDTTLQFPYKEPERRAIN 772

Query: 197 -----------IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
                       A A +DFC  + ++L LK+G  + +L+K+G+Q GWW+G+I  R+ +F
Sbjct: 773 KPPVGSTKYFGTAKARYDFCARDRSELSLKEGDIIKILNKKGQQ-GWWRGEIYGRIGWF 830

Couples tyrosine kinase signals with the activation of the Rho/Rac GTPases, thus leading to cell differentiation and/or proliferation.

Rattus norvegicus (taxid: 10116)

>sp|Q45FX5|VAV_CAEEL Protein vav-1 OS=Caenorhabditis elegans GN=vav-1 PE=1 SV=1

 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 16/166 (9%)

Query: 85  LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
           +SE+LW++GEM R KA S L+   +GT+L+R       +  +T  +LS K D  VKHM +
Sbjct: 826 ISEFLWYMGEMERAKAESTLKGTPNGTFLVRYSK----NRKQTAISLSYKND--VKHM-I 878

Query: 145 YEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ---IIAVAE 201
            E+  DG  + +L +   F S VEL+  Y  N+LIE F  L+  L+ P+ Q     AV +
Sbjct: 879 IEQNSDG--KVYLDEDYIFNSTVELVQYYRSNNLIEIFAALDTCLKNPYSQCKVFKAVHD 936

Query: 202 FDFCPTEANQ---LPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           +D  P+  N+   L  K G  V++L   GE +GWWKG+++ +  +F
Sbjct: 937 YD-APSPNNEGKFLSFKTGDIVVLLDTVGEDRGWWKGQVNNKSGFF 981

Acts as guanine nucleotide exchange factor (GEF) for Rho GTPase. Has a critical roles in the generation of rhythmic behaviors: feeding, defecation and ovulation by dynamically regulating the concentration of intracellular calcium.

Caenorhabditis elegans (taxid: 6239)

>sp|Q9R0C8|VAV3_MOUSE Guanine nucleotide exchange factor VAV3 OS=Mus musculus GN=Vav3 PE=1 SV=2

 Score = 87.8 bits (216), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 56/252 (22%)

Query: 43  RCGTGVPLPAMSPRPPLMDIAG-AAQPLGGNE----WTAKSWADHE-------------- 83
           R  TG P P +   PPL   AG   + L G+     W  ++ A  E              
Sbjct: 601 RNYTGTPAPGLHEGPPLHIQAGDTVELLRGDAHSVFWQGRNLASGEVGFFPSDAVKPSPC 660

Query: 84  -----NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEK 138
                + S   W+ G M R +A + L    + TYL+R R +         YA+S+K + +
Sbjct: 661 VPKPVDYSCQPWYAGPMERLQAETELINRVNSTYLVRHRTKESGE-----YAISIKYNNE 715

Query: 139 VKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI-- 196
            KH+K+  +  DG   + ++++R F+S++EL+  Y+ +SL E F  L+  LQ P+++   
Sbjct: 716 AKHIKILTR--DGF--FHIAENRKFKSLMELVEYYKHHSLKEGFRTLDTTLQFPYKEPEQ 771

Query: 197 --------------------IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
                               IA+A +DFC  +  +L L +G  V + +K     GWW+G+
Sbjct: 772 PAGQRGNRTGNSLLSPKVLGIAIARYDFCARDMRELSLLKGDMVKIYTKMS-ANGWWRGE 830

Query: 237 IDERVSYFFQLY 248
           ++ RV +F   Y
Sbjct: 831 VNGRVGWFPSTY 842

Exchange factor for GTP-binding proteins RhoA, RhoG and, to a lesser extent, Rac1. Binds physically to the nucleotide-free states of those GTPases (By similarity). Plays an important role in angiogenesis. Its recruitement by phosphorylated EPHA2 is critical for EFNA1-induced RAC1 GTPase activation and vascular endothelial cell migration and assembly. May be important for integrin-mediated signaling, at least in some cell types. In osteoclasts, along with SYK tyrosine kinase, required for signaling through integrin alpha-v/beta-1 (ITAGV-ITGB1), a crucial event for osteoclast proper cytoskeleton organization and function. This signaling pathway involves RAC1, but not RHO, activation. Necessary for proper wound healing. In the course of wound healing, required for the phagocytotic cup formation preceding macrophage phagocytosis of apoptotic neutrophils. Responsible for integrin beta-2-mediated macrophage adhesion and, to a lesser extent, contributes to beta-3-mediated adhesion. Does not affect integrin beta-1-mediated adhesion.

Mus musculus (taxid: 10090)

>sp|Q60992|VAV2_MOUSE Guanine nucleotide exchange factor VAV2 OS=Mus musculus GN=Vav2 PE=1 SV=1

 Score = 87.4 bits (215), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 58/230 (25%)

Query: 68  PLGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNET 127
           P+ G   T +  +   + + Y WF G M R++  +LL+  A GTYL+R RP         
Sbjct: 641 PVDGRPPTGRPPSREIDYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAER---- 696

Query: 128 IYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNV 187
            +A+S+K +++VKH+KV EK+        +++++ F S++EL+  Y+ +SL E+F  L+ 
Sbjct: 697 -FAISIKFNDEVKHIKVVEKD----SWIHITEAKKFESLLELVEYYQCHSLKESFKQLDT 751

Query: 188 RLQLPFR-----------------------------------------------QII--A 198
            L+ P++                                               ++I  A
Sbjct: 752 TLKFPYKSRERTTSRASSRSPASCASYNFSFLSPQGLSFAPQAPSAPFWSVFTPRVIGTA 811

Query: 199 VAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
           VA ++F   +  +L L++G  V + S+ G  +GWWKG+ + R+ +F   Y
Sbjct: 812 VARYNFAARDMRELSLREGDVVKIYSRIGGDQGWWKGETNGRIGWFPSTY 861

Guanine nucleotide exchange factor for the Rho family of Ras-related GTPases. Plays an important role in angiogenesis. Its recruitment by phosphorylated EPHA2 is critical for EFNA1-induced RAC1 GTPase activation and vascular endothelial cell migration and assembly.

Mus musculus (taxid: 10090)

>sp|Q9UKW4|VAV3_HUMAN Guanine nucleotide exchange factor VAV3 OS=Homo sapiens GN=VAV3 PE=1 SV=1

 Score = 87.4 bits (215), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 56/252 (22%)

Query: 43  RCGTGVPLPAMSPRPPLMDIAG-AAQPLGGNE----WTAKSWADHE-------------- 83
           R  +G P PA+   PPL   AG   + L G+     W  ++ A  E              
Sbjct: 601 RNYSGTPPPALHEGPPLQLQAGDTVELLKGDAHSLFWQGRNLASGEVGFFPSDAVKPCPC 660

Query: 84  -----NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEK 138
                + S   W+ G M R +A + L    + TYL+R R +         YA+S+K + +
Sbjct: 661 VPKPVDYSCQPWYAGAMERLQAETELINRVNSTYLVRHRTKESGE-----YAISIKYNNE 715

Query: 139 VKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI-- 196
            KH+K+  +  DG   + ++++R F+S++EL+  Y+ +SL E F  L+  LQ P+++   
Sbjct: 716 AKHIKILTR--DGF--FHIAENRKFKSLMELVEYYKHHSLKEGFRTLDTTLQFPYKEPEH 771

Query: 197 --------------------IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
                               IA+A +DFC  +  +L L +G  V + +K     GWW+G+
Sbjct: 772 SAGQRGNRAGNSLLSPKVLGIAIARYDFCARDMRELSLLKGDVVKIYTKMS-ANGWWRGE 830

Query: 237 IDERVSYFFQLY 248
           ++ RV +F   Y
Sbjct: 831 VNGRVGWFPSTY 842

Exchange factor for GTP-binding proteins RhoA, RhoG and, to a lesser extent, Rac1. Binds physically to the nucleotide-free states of those GTPases. Plays an important role in angiogenesis. Its recruitement by phosphorylated EPHA2 is critical for EFNA1-induced RAC1 GTPase activation and vascular endothelial cell migration and assembly (By similarity). May be important for integrin-mediated signaling, at least in some cell types. In osteoclasts, along with SYK tyrosine kinase, required for signaling through integrin alpha-v/beta-1 (ITAGV-ITGB1), a crucial event for osteoclast proper cytoskeleton organization and function. This signaling pathway involves RAC1, but not RHO, activation. Necessary for proper wound healing. In the course of wound healing, required for the phagocytotic cup formation preceding macrophage phagocytosis of apoptotic neutrophils. Responsible for integrin beta-2 (ITGB2)-mediated macrophage adhesion and, to a lesser extent, contributes to beta-3 (ITGB3)-mediated adhesion. Does not affect integrin beta-1 (ITGB1)-mediated adhesion.

Homo sapiens (taxid: 9606)

>sp|P52735|VAV2_HUMAN Guanine nucleotide exchange factor VAV2 OS=Homo sapiens GN=VAV2 PE=1 SV=2

 Score = 84.3 bits (207), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 58/230 (25%)

Query: 68  PLGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNET 127
           P+ G    ++  +   + + Y WF G M R++  +LL+  A GTYL+R RP         
Sbjct: 651 PVDGRPPISRPPSREIDYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAER---- 706

Query: 128 IYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNV 187
            +A+S+K +++VKH+KV EK+        +++++ F S++EL+  Y+ +SL E+F  L+ 
Sbjct: 707 -FAISIKFNDEVKHIKVVEKD----NWIHITEAKKFDSLLELVEYYQCHSLKESFKQLDT 761

Query: 188 RLQLPFRQI-------------------------------------------------IA 198
            L+ P++                                                    A
Sbjct: 762 TLKYPYKSRERSASRASSRSPASCASYNFSFLSPQGLSFASQGPSAPFWSVFTPRVIGTA 821

Query: 199 VAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
           VA ++F   +  +L L++G  V + S+ G  +GWWKG+ + R+ +F   Y
Sbjct: 822 VARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTY 871

Guanine nucleotide exchange factor for the Rho family of Ras-related GTPases. Plays an important role in angiogenesis. Its recruitment by phosphorylated EPHA2 is critical for EFNA1-induced RAC1 GTPase activation and vascular endothelial cell migration and assembly.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
328701737	813	PREDICTED: protein vav-like isoform 1 [A	0.808	0.270	0.508	1e-65
157132652	771	vav1 [Aedes aegypti] gi|108871123|gb|EAT	0.702	0.247	0.502	4e-53
158299385	762	AGAP010292-PA [Anopheles gambiae str. PE	0.691	0.246	0.490	2e-49
357623523	888	hypothetical protein KGM_04810 [Danaus p	0.761	0.233	0.472	7e-49
332024094	835	Protein vav [Acromyrmex echinatior]	0.761	0.247	0.460	9e-49
380030241	795	PREDICTED: protein vav-like [Apis florea	0.775	0.265	0.465	1e-48
307183368	773	Protein vav [Camponotus floridanus]	0.775	0.272	0.457	1e-48
322791334	794	hypothetical protein SINV_04187 [Solenop	0.775	0.265	0.457	3e-47
307208145	211	Protein vav [Harpegnathos saltator]	0.735	0.947	0.475	4e-47
345492109	805	PREDICTED: protein vav-like isoform 1 [N	0.786	0.265	0.446	1e-46

>gi|328701737|ref|XP_001946064.2| PREDICTED: protein vav-like isoform 1 [Acyrthosiphon pisum] gi|328701739|ref|XP_003241697.1| PREDICTED: protein vav-like isoform 2 [Acyrthosiphon pisum]

 Score =  255 bits (652), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 116/228 (50%), Positives = 173/228 (75%), Gaps = 8/228 (3%)

Query: 27  QACYLACHKQCIPHTGRCG------TGVPLPAMSPRPPLMDIAGAAQPLGGNEWTAKSWA 80
           + C+++ HK CIP +GRCG      T +     S R P  D +   Q     +WT ++W+
Sbjct: 575 EECFISVHKSCIPESGRCGLISPQSTTIQNTMFSNRFP-ADHSNFNQRHRSPDWT-RNWS 632

Query: 81  DHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVK 140
           D++ L+E+LWFVGEM R++AT+LLE E+DGTYL+RIRPQGPT P ET+YALSLK++ +VK
Sbjct: 633 DNDTLTEHLWFVGEMDRDRATNLLESESDGTYLVRIRPQGPTRPVETVYALSLKSNNQVK 692

Query: 141 HMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVA 200
           HMK+ E+  DG+  ++LS+ R+F ++VEL+  YE+NSL ENF GL+++L+ PF +I+A+A
Sbjct: 693 HMKICERLEDGISSFYLSEKRFFPNLVELVNFYEKNSLSENFTGLDIKLKWPFCRILAIA 752

Query: 201 EFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
           +++F PTE+NQLPLK+GC + +LSKEG+QKGWWKG+I +++ +F ++Y
Sbjct: 753 KYNFSPTESNQLPLKEGCTLKILSKEGDQKGWWKGQIGDKIGFFPKVY 800

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157132652|ref|XP_001662594.1| vav1 [Aedes aegypti] gi|108871123|gb|EAT35348.1| AAEL012473-PB [Aedes aegypti]

 Score =  214 bits (544), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 142/219 (64%), Gaps = 28/219 (12%)

Query: 27  QACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWTAKSWADHENLS 86
           ++C +  HK CI  TGRC         SP PP+ D                       LS
Sbjct: 565 KSCEIVVHKGCISSTGRCKQN-----QSP-PPVCDRL---------------------LS 597

Query: 87  EYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV-KHMKVY 145
           E+ WFVG M R+ AT+ LE++  GTYLLR+RPQG ++  ETIYALSLKTD K+ KHMK+Y
Sbjct: 598 EFNWFVGAMDRDTATNKLEKKKVGTYLLRVRPQGASNSYETIYALSLKTDNKIIKHMKIY 657

Query: 146 EKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFC 205
           +K+ +    Y+LS  R+F++IVEL+  YERN L ENF GLN  LQ PF+++IA A +DF 
Sbjct: 658 QKQENFSVLYYLSTRRHFKTIVELVSFYERNDLGENFAGLNQSLQWPFKEVIATALYDFS 717

Query: 206 PTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           P E NQLPL+QGCQVIV+ KEG+ KGWW+GK  E+V +F
Sbjct: 718 PNEPNQLPLRQGCQVIVIGKEGDSKGWWRGKTLEKVGFF 756

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158299385|ref|XP_319489.4| AGAP010292-PA [Anopheles gambiae str. PEST] gi|157014339|gb|EAA14588.5| AGAP010292-PA [Anopheles gambiae str. PEST]

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/216 (49%), Positives = 135/216 (62%), Gaps = 28/216 (12%)

Query: 27  QACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWTAKSWADHENLS 86
           + C +  H+ CI  TGRC      P     PP+ D                       LS
Sbjct: 574 KVCEIVVHRGCISSTGRCKQLQQTP-----PPVCDRL---------------------LS 607

Query: 87  EYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV-KHMKVY 145
           E+ WFVG M R+ AT  LE +  GTYLLR+RPQG +H +ETIYALSLKTD+K+ KHMK+Y
Sbjct: 608 EFNWFVGTMNRDSATQRLENKKIGTYLLRVRPQGASHESETIYALSLKTDKKIIKHMKIY 667

Query: 146 EKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFC 205
           +K+      Y+LS  RYF++I+EL+  YERN L ENF GLN  LQ PF++ I VA +DF 
Sbjct: 668 QKKEHQNVFYYLSTRRYFKTIIELVSFYERNDLGENFAGLNQLLQWPFKEEIVVAIYDFA 727

Query: 206 PTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERV 241
           P E NQLP++ GCQVIV+ KEG+ KGWW+GK  E+V
Sbjct: 728 PNELNQLPMR-GCQVIVIGKEGDSKGWWRGKTLEKV 762

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357623523|gb|EHJ74634.1| hypothetical protein KGM_04810 [Danaus plexippus]

 Score =  200 bits (508), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 110/233 (47%), Positives = 138/233 (59%), Gaps = 26/233 (11%)

Query: 16  LKSRGLRPLCSQACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWT 75
           LK R  +      C    HK+CI  +GRCG G                 A QP       
Sbjct: 564 LKGRIFQGYLCSVCGACAHKECIALSGRCGGGSAPAPPL-------PPHALQP------- 609

Query: 76  AKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKT 135
                    L  Y+W+VGEM RE ATS LER  DGT+LLR+RP+   H  +T YALSLKT
Sbjct: 610 ------DTALHYYMWYVGEMSRETATSRLERRVDGTFLLRVRPRAALH--DTQYALSLKT 661

Query: 136 DEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
           D  VKHM+V  K +D VP Y+LS+SR+FRS+VELI  YE+ SL ENF+GLN  L+ PFR+
Sbjct: 662 DNTVKHMRVCLKPIDSVPHYYLSESRFFRSVVELISYYEKTSLSENFVGLNSNLRWPFRR 721

Query: 196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI----DERVSYF 244
           ++A    DF P EA+QL L+ G +V+VLSKEG+ +GWWKG+     D R  YF
Sbjct: 722 VVATVIHDFRPLEASQLALRPGAKVLVLSKEGDGRGWWKGRTLDKGDHRSGYF 774

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024094|gb|EGI64311.1| Protein vav [Acromyrmex echinatior]

 Score =  199 bits (507), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 106/230 (46%), Positives = 144/230 (62%), Gaps = 23/230 (10%)

Query: 16  LKSRGLRPLCSQACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWT 75
           LK R  +    + C LA HKQCI H+GRC      P   P  P                 
Sbjct: 620 LKGRIFQGYKCETCRLAVHKQCIAHSGRCMPTPTSPTPPPPLPC---------------- 663

Query: 76  AKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQG-PTHPNETIYALSLK 134
                    LS  LWFVGEMGR+ A++ LE   DGTY+LR+RP G P   +ET YALS+K
Sbjct: 664 ------ERALSAKLWFVGEMGRDAASNKLESRDDGTYMLRVRPTGQPRLKHETNYALSIK 717

Query: 135 TDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR 194
            +  VKH++V+++++DG   Y+LS+SR+F+S+VEL+  YER SL ENF  L+ RL  P+R
Sbjct: 718 AEGAVKHIRVFKRDVDGADLYYLSESRFFKSVVELVEYYERASLSENFEKLDQRLLWPYR 777

Query: 195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           +++A A FDF   E NQL L++GC+V+VLSKEG+ KGWWKGKI +++ +F
Sbjct: 778 RVLAKALFDFRGCERNQLSLRRGCRVVVLSKEGDAKGWWKGKIGDQIGFF 827

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030241|ref|XP_003698761.1| PREDICTED: protein vav-like [Apis florea]

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/234 (46%), Positives = 147/234 (62%), Gaps = 23/234 (9%)

Query: 16  LKSRGLRPLCSQACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWT 75
           LK R  +    +AC  A HKQCI H+GRC    P P                        
Sbjct: 580 LKGRIFQGYRCEACCYAVHKQCIAHSGRCMPVPPPPP----------------------P 617

Query: 76  AKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQG-PTHPNETIYALSLK 134
             S +    LS  LWFVGEMGR+ A++ LE   DGTY+LR+RP G P   +ET YALS+K
Sbjct: 618 PPSLSCERALSVKLWFVGEMGRDTASNKLEPREDGTYMLRVRPAGQPRLKHETNYALSIK 677

Query: 135 TDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR 194
            D  VKH++V+++++DG   Y+LS+SR+F+S+VEL+  YER SL ENF  L+ RL  P+R
Sbjct: 678 ADGTVKHIRVFKRDVDGADVYYLSESRFFKSVVELVEYYERASLSENFEKLDQRLLWPYR 737

Query: 195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
           +++A A FDF   E NQL L++GC+V+VLSKEG+ KGWWKGKI ++V +F + Y
Sbjct: 738 RVLAKALFDFRGGERNQLSLRRGCRVVVLSKEGDAKGWWKGKIGDQVGFFPKEY 791

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307183368|gb|EFN70226.1| Protein vav [Camponotus floridanus]

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/234 (45%), Positives = 149/234 (63%), Gaps = 23/234 (9%)

Query: 16  LKSRGLRPLCSQACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWT 75
           LK R  +    + C LA HKQCI H+GRC   VP   +    P +    A          
Sbjct: 558 LKGRIFQGYKCEICRLAVHKQCIAHSGRC---VPTAPLLTPSPPLPCERA---------- 604

Query: 76  AKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTH-PNETIYALSLK 134
                    L+  LWFVGEMGR+ A++ LE   DGTY+LR+RP G +   +ET YALS+K
Sbjct: 605 ---------LAVKLWFVGEMGRDAASNKLESREDGTYMLRVRPAGQSRLKHETNYALSIK 655

Query: 135 TDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR 194
            +  VKH++V+++++DG   Y+LS+SR+F+S+VEL+  YER SL ENF  L+ RL  P+R
Sbjct: 656 AEGTVKHIRVFKRDVDGADLYYLSESRFFKSVVELVEYYERASLSENFEKLDQRLLWPYR 715

Query: 195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
           +++A A FDF   E NQL L++GC+V+VLSKEG+ KGWWKGKI ++V +F + Y
Sbjct: 716 RVLAKALFDFRGCERNQLSLRRGCRVVVLSKEGDAKGWWKGKIGDQVGFFPKEY 769

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322791334|gb|EFZ15824.1| hypothetical protein SINV_04187 [Solenopsis invicta]

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/234 (45%), Positives = 146/234 (62%), Gaps = 23/234 (9%)

Query: 16  LKSRGLRPLCSQACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWT 75
           LK R  +    + C LA HKQCI H+GRC    P P   P  P                 
Sbjct: 579 LKGRIFQGYKCETCRLAVHKQCIAHSGRCMPMPPSPTPPPPLPC---------------- 622

Query: 76  AKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQG-PTHPNETIYALSLK 134
                    L+  LWFVGEMGR+ A++ LE   DGTY+LR+RP G P   +ET YALS+K
Sbjct: 623 ------ERALTVKLWFVGEMGRDAASNKLESREDGTYMLRVRPAGQPRLKHETNYALSIK 676

Query: 135 TDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR 194
            +  VKH++V+++++DG   Y+LS+SR+F+S+VEL+  YE  SL ENF  L+ RL  P+R
Sbjct: 677 AEGTVKHIRVFKRDVDGADLYYLSESRFFKSVVELVEYYEGASLSENFEKLDQRLLWPYR 736

Query: 195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
           +++A A FDF   E NQL L++GC+V+VLSKEG+ KGWWKGKI ++V +F + Y
Sbjct: 737 RVLARALFDFRGCEGNQLSLRRGCRVVVLSKEGDAKGWWKGKIGDKVGFFPKEY 790

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307208145|gb|EFN85636.1| Protein vav [Harpegnathos saltator]

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/223 (47%), Positives = 143/223 (64%), Gaps = 23/223 (10%)

Query: 27  QACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWTAKSWADHENLS 86
           + C LA HKQCI H+GRC    P P   P  P                          LS
Sbjct: 7   ETCRLAVHKQCIAHSGRCMPAPPSPTPPPPLPC----------------------ERALS 44

Query: 87  EYLWFVGEMGREKATSLLEREADGTYLLRIRPQG-PTHPNETIYALSLKTDEKVKHMKVY 145
             LWFVGEMGR+ A++ LE   DGTY+LR+RP G P   +ET YALS+K +  VKH++V+
Sbjct: 45  VKLWFVGEMGRDAASNKLESREDGTYMLRVRPAGQPRLQHETNYALSIKAEGAVKHIRVF 104

Query: 146 EKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFC 205
           +++++G   Y+LS+SR+F+S+VEL+  YER SL ENF  L+ RL  P+R+I+A A FDF 
Sbjct: 105 KRDVEGADFYYLSESRFFKSVVELVEYYERASLSENFEKLDQRLLWPYRRILAKALFDFH 164

Query: 206 PTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
             E NQL L++GC+V+VLSKEG+ KGWWKGKI ++V +F + Y
Sbjct: 165 GCERNQLSLRRGCRVVVLSKEGDAKGWWKGKIGDQVGFFPKEY 207

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345492109|ref|XP_001601794.2| PREDICTED: protein vav-like isoform 1 [Nasonia vitripennis] gi|345492111|ref|XP_003426779.1| PREDICTED: protein vav-like isoform 2 [Nasonia vitripennis]

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/235 (44%), Positives = 144/235 (61%), Gaps = 21/235 (8%)

Query: 16  LKSRGLRPLCSQACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWT 75
           LK R  +    + C LA HKQCI ++GRC    P P   P PP                 
Sbjct: 586 LKGRIFQGYKCEICRLAVHKQCITYSGRCVPVPPPPPPPPPPPPQPF------------- 632

Query: 76  AKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQG--PTHPNETIYALSL 133
                    LS  LW+VGEMGR+ A   L+   +GTY++R+RP    P   +ET YALS+
Sbjct: 633 ------ERELSAKLWYVGEMGRDAAAQKLDARENGTYMVRVRPAAGQPRLKHETNYALSI 686

Query: 134 KTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF 193
           K D  VKH++++++E+DG   Y+LS+SRYF+++VEL+  YER SL ENF  L+ RL  PF
Sbjct: 687 KADNAVKHIRIFKREVDGADLYYLSESRYFKNVVELVEYYERVSLAENFEKLDQRLLWPF 746

Query: 194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
           R+++A A FDF   E N+L L++GC+V+VLSKEG+ KGWWKGKI + V +F + Y
Sbjct: 747 RRVLAKALFDFRGGERNELSLRKGCRVVVLSKEGDAKGWWKGKIGDLVGFFPKEY 801

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
FB|FBgn0040068	793	Vav "Vav ortholog (H. sapiens)	0.632	0.216	0.465	2.4e-33
UNIPROTKB|F1SCN0	789	VAV1 "Uncharacterized protein"	0.382	0.131	0.353	1.6e-14
UNIPROTKB|Q08DN7	844	VAV1 "Proto-oncogene vav" [Bos	0.488	0.157	0.333	3.6e-14
UNIPROTKB|F5H5P4	748	VAV1 "Proto-oncogene vav" [Hom	0.488	0.177	0.314	2.1e-13
UNIPROTKB|Q96D37	790	VAV1 "Proto-oncogene vav" [Hom	0.488	0.168	0.314	2.5e-13
MGI|MGI:102718	868	Vav2 "vav 2 oncogene" [Mus mus	0.433	0.135	0.322	2.7e-13
UNIPROTKB|F1N6T8	719	VAV2 "Uncharacterized protein"	0.433	0.164	0.314	2.7e-13
UNIPROTKB|E2RGT8	845	VAV1 "Uncharacterized protein"	0.488	0.157	0.314	3e-13
MGI|MGI:98923	845	Vav1 "vav 1 oncogene" [Mus mus	0.488	0.157	0.320	3e-13
UNIPROTKB|P15498	845	VAV1 "Proto-oncogene vav" [Hom	0.488	0.157	0.314	3e-13

FB|FBgn0040068 Vav "Vav ortholog (H. sapiens)" [Drosophila melanogaster (taxid:7227)]

 Score = 372 (136.0 bits), Expect = 2.4e-33, P = 2.4e-33
 Identities = 81/174 (46%), Positives = 107/174 (61%)

Query:    85 LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV-KHMK 143
             LSE+ WF G M RE A   LE    GTYLLR+RPQGP+  +ET+YALSLKTD+ V KHMK
Sbjct:   617 LSEFNWFAGNMDRETAAHRLENRRIGTYLLRVRPQGPSTAHETMYALSLKTDDNVIKHMK 676

Query:   144 VYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFD 203
             + ++       Y LS  R+F++IVEL+  YERN L ENF GLN  LQ P++++IA A +D
Sbjct:   677 INQENSGDSMLYCLSSRRHFKTIVELVSYYERNDLGENFAGLNQSLQWPYKEVIATALYD 736

Query:   204 FCPTE-ANQLPLKQGCQVIVLSXXXXXXXXXXXXIDERVSYFFQLYWGNFRLLS 256
             + P   +NQL L+  CQV+V+             I + V YF + Y    +L S
Sbjct:   737 YEPKAGSNQLQLRTDCQVLVIGKDGDSKGWWRGKIGDTVGYFPKEYVQEQKLAS 790

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISS;IDA

GO:0019992 "diacylglycerol binding" evidence=ISS

GO:0007266 "Rho protein signal transduction" evidence=ISS

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0007155 "cell adhesion" evidence=IMP

GO:0007015 "actin filament organization" evidence=IMP

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0016477 "cell migration" evidence=IMP

GO:0007391 "dorsal closure" evidence=IMP

GO:0007424 "open tracheal system development" evidence=IMP

GO:0007411 "axon guidance" evidence=IMP

GO:0007520 "myoblast fusion" evidence=IMP

GO:0031532 "actin cytoskeleton reorganization" evidence=IDA

GO:0007417 "central nervous system development" evidence=IGI

GO:0007409 "axonogenesis" evidence=IMP

GO:0072499 "photoreceptor cell axon guidance" evidence=IMP

GO:0035011 "melanotic encapsulation of foreign target" evidence=IMP

UNIPROTKB|F1SCN0 VAV1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 178 (67.7 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
 Identities = 40/113 (35%), Positives = 68/113 (60%)

Query:    83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
             ++LS +LW+ G M R  A S+L   +DGT+L+R R +         +A+S+K + +VKH+
Sbjct:   608 QDLSVHLWYAGPMERAGAESILTNRSDGTFLVRQRVKDAAE-----FAISIKYNVEVKHI 662

Query:   143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
             K+    M G   Y +++ + FR + EL+  Y++NSL + F  L+  LQ PF++
Sbjct:   663 KI----MTGEGLYRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKE 711

GO:0045785 "positive regulation of cell adhesion" evidence=IEA

GO:0043087 "regulation of GTPase activity" evidence=IEA

GO:0042110 "T cell activation" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0030676 "Rac guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0007229 "integrin-mediated signaling pathway" evidence=IEA

GO:0006955 "immune response" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|Q08DN7 VAV1 "Proto-oncogene vav" [Bos taurus (taxid:9913)]

 Score = 188 (71.2 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
 Identities = 53/159 (33%), Positives = 88/159 (55%)

Query:    83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
             ++LS +LW+ G M R  A S+L   +DGT+L+R R +         +A+S+K + +VKH+
Sbjct:   663 QDLSVHLWYAGPMERAGAESILTNRSDGTFLVRQRVKDAAE-----FAISIKYNVEVKHI 717

Query:   143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF----RQII- 197
             K+   E  G+  Y +++ + FR + EL+  Y++NSL + F  L+  LQ PF    R+ I 
Sbjct:   718 KIMTAE--GL--YRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKEPERRAIN 773

Query:   198 ------------AVAEFDFCPTEANQLPLKQGCQVIVLS 224
                         A A +DFC  + ++L LK+G  V +L+
Sbjct:   774 KPSAGSIKIFGTAKARYDFCARDRSELSLKEGDIVKILN 812

GO:0046872 "metal ion binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|F5H5P4 VAV1 "Proto-oncogene vav" [Homo sapiens (taxid:9606)]

 Score = 185 (70.2 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
 Identities = 50/159 (31%), Positives = 87/159 (54%)

Query:    83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
             ++LS +LW+ G M R  A S+L   +DGT+L+R R +         +A+S+K + +VKH+
Sbjct:   567 QDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAE-----FAISIKYNVEVKHI 621

Query:   143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI------ 196
             K+   E  G+  Y +++ + FR + EL+  Y++NSL + F  L+  LQ PF++       
Sbjct:   622 KIMTAE--GL--YRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKEPEKRTIS 677

Query:   197 -----------IAVAEFDFCPTEANQLPLKQGCQVIVLS 224
                         A A +DFC  + ++L LK+G  + +L+
Sbjct:   678 RPAVGSTKYFGTAKARYDFCARDRSELSLKEGDIIKILN 716

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q96D37 VAV1 "Proto-oncogene vav" [Homo sapiens (taxid:9606)]

 Score = 185 (70.2 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
 Identities = 50/159 (31%), Positives = 87/159 (54%)

Query:    83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
             ++LS +LW+ G M R  A S+L   +DGT+L+R R +         +A+S+K + +VKH+
Sbjct:   609 QDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAE-----FAISIKYNVEVKHI 663

Query:   143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI------ 196
             K+   E  G+  Y +++ + FR + EL+  Y++NSL + F  L+  LQ PF++       
Sbjct:   664 KIMTAE--GL--YRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKEPEKRTIS 719

Query:   197 -----------IAVAEFDFCPTEANQLPLKQGCQVIVLS 224
                         A A +DFC  + ++L LK+G  + +L+
Sbjct:   720 RPAVGSTKYFGTAKARYDFCARDRSELSLKEGDIIKILN 758

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

MGI|MGI:102718 Vav2 "vav 2 oncogene" [Mus musculus (taxid:10090)]

 Score = 177 (67.4 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
 Identities = 41/127 (32%), Positives = 74/127 (58%)

Query:    68 PLGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNET 127
             P+ G   T +  +   + + Y WF G M R++  +LL+  A GTYL+R RP         
Sbjct:   641 PVDGRPPTGRPPSREIDYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAER---- 696

Query:   128 IYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNV 187
              +A+S+K +++VKH+KV EK+        +++++ F S++EL+  Y+ +SL E+F  L+ 
Sbjct:   697 -FAISIKFNDEVKHIKVVEKDS----WIHITEAKKFESLLELVEYYQCHSLKESFKQLDT 751

Query:   188 RLQLPFR 194
              L+ P++
Sbjct:   752 TLKFPYK 758

GO:0001525 "angiogenesis" evidence=IEA

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IMP

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005154 "epidermal growth factor receptor binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007264 "small GTPase mediated signal transduction" evidence=IMP

GO:0016477 "cell migration" evidence=IGI

GO:0030031 "cell projection assembly" evidence=IGI

GO:0030032 "lamellipodium assembly" evidence=IGI

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0043552 "positive regulation of phosphatidylinositol 3-kinase activity" evidence=IGI

GO:0046872 "metal ion binding" evidence=IEA

GO:0050790 "regulation of catalytic activity" evidence=IMP

UNIPROTKB|F1N6T8 VAV2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 174 (66.3 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
 Identities = 40/127 (31%), Positives = 74/127 (58%)

Query:    68 PLGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNET 127
             P+ G    ++  +   + + Y WF G M R++  +LL+  A GTYL+R RP         
Sbjct:   491 PVDGRPPISRPLSREMDYTAYPWFAGNMERQQTDNLLKPHASGTYLIRERPAEAER---- 546

Query:   128 IYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNV 187
              +A+S+K +++VKH+KV EK+        +++++ F S++EL+  Y+ +SL E+F  L+ 
Sbjct:   547 -FAISIKFNDEVKHIKVVEKDS----WVHITEAKKFESLLELVEYYQYHSLKESFKQLDT 601

Query:   188 RLQLPFR 194
              L+ P++
Sbjct:   602 TLKYPYK 608

GO:0043552 "positive regulation of phosphatidylinositol 3-kinase activity" evidence=IEA

GO:0030032 "lamellipodium assembly" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0007264 "small GTPase mediated signal transduction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005154 "epidermal growth factor receptor binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|E2RGT8 VAV1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 186 (70.5 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
 Identities = 50/159 (31%), Positives = 87/159 (54%)

Query:    83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
             ++LS +LW+ G M R  A S+L   +DGT+L+R R +         +A+S+K + +VKH+
Sbjct:   664 QDLSVHLWYAGPMERSGAESILTNRSDGTFLVRQRVKDTAE-----FAISIKYNVEVKHI 718

Query:   143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI------ 196
             K+   E  G+  Y +++ + FR + EL+  Y++NSL + F  L+  LQ PF++       
Sbjct:   719 KIMTAE--GL--YRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKEPEKRAIS 774

Query:   197 -----------IAVAEFDFCPTEANQLPLKQGCQVIVLS 224
                         A A +DFC  + ++L LK+G  + +L+
Sbjct:   775 KPPAGSTKYFGTAKARYDFCARDRSELSLKEGDIIKILN 813

GO:0045785 "positive regulation of cell adhesion" evidence=IEA

GO:0043087 "regulation of GTPase activity" evidence=IEA

GO:0042110 "T cell activation" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0030676 "Rac guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0007229 "integrin-mediated signaling pathway" evidence=IEA

GO:0006955 "immune response" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

MGI|MGI:98923 Vav1 "vav 1 oncogene" [Mus musculus (taxid:10090)]

 Score = 186 (70.5 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
 Identities = 51/159 (32%), Positives = 88/159 (55%)

Query:    83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
             ++LS +LW+ G M R  A  +L   +DGTYL+R R +         +A+S+K + +VKH+
Sbjct:   664 QDLSVHLWYAGPMERAGAEGILTNRSDGTYLVRQRVKDTAE-----FAISIKYNVEVKHI 718

Query:   143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF----RQII- 197
             K+   E  G+  Y +++ + FR ++EL+  Y++NSL + F  L+  LQ P+    R+ I 
Sbjct:   719 KIMTSE--GL--YRITEKKAFRGLLELVEFYQQNSLKDCFKSLDTTLQFPYKEPERRAIS 774

Query:   198 ------------AVAEFDFCPTEANQLPLKQGCQVIVLS 224
                         A A +DFC  + ++L LK+G  + +L+
Sbjct:   775 KPPAGSTKYFGTAKARYDFCARDRSELSLKEGDIIKILN 813

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006909 "phagocytosis" evidence=IGI

GO:0006955 "immune response" evidence=IMP

GO:0007229 "integrin-mediated signaling pathway" evidence=IGI

GO:0030217 "T cell differentiation" evidence=TAS

GO:0030676 "Rac guanyl-nucleotide exchange factor activity" evidence=IGI

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IMP

GO:0042110 "T cell activation" evidence=IMP

GO:0043087 "regulation of GTPase activity" evidence=IGI

GO:0045785 "positive regulation of cell adhesion" evidence=IGI

GO:0046872 "metal ion binding" evidence=IEA

GO:0050790 "regulation of catalytic activity" evidence=IEA

UNIPROTKB|P15498 VAV1 "Proto-oncogene vav" [Homo sapiens (taxid:9606)]

 Score = 185 (70.2 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
 Identities = 50/159 (31%), Positives = 87/159 (54%)

Query:    83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
             ++LS +LW+ G M R  A S+L   +DGT+L+R R +         +A+S+K + +VKH+
Sbjct:   664 QDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAE-----FAISIKYNVEVKHI 718

Query:   143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI------ 196
             K+   E  G+  Y +++ + FR + EL+  Y++NSL + F  L+  LQ PF++       
Sbjct:   719 KIMTAE--GL--YRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKEPEKRTIS 774

Query:   197 -----------IAVAEFDFCPTEANQLPLKQGCQVIVLS 224
                         A A +DFC  + ++L LK+G  + +L+
Sbjct:   775 RPAVGSTKYFGTAKARYDFCARDRSELSLKEGDIIKILN 813

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=TAS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0005886 "plasma membrane" evidence=TAS

GO:0006915 "apoptotic process" evidence=TAS

GO:0007264 "small GTPase mediated signal transduction" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

GO:0030168 "platelet activation" evidence=TAS

GO:0031295 "T cell costimulation" evidence=TAS

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=TAS

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	272
cd09940	102	cd09940, SH2_Vav_family, Src homology 2 (SH2) doma	9e-46
smart00252	84	smart00252, SH2, Src homology 2 domains	1e-19
cd10405	103	cd10405, SH2_Vav1, Src homology 2 (SH2) domain fou	8e-19
cd10406	103	cd10406, SH2_Vav2, Src homology 2 (SH2) domain fou	2e-16
cd10407	103	cd10407, SH2_Vav3, Src homology 2 (SH2) domain fou	2e-15
pfam00017	77	pfam00017, SH2, SH2 domain	1e-13
cd00173	79	cd00173, SH2, Src homology 2 (SH2) domain	3e-13
cd09942	110	cd09942, SH2_nSH2_p85_like, N-terminal Src homolog	6e-10
cd10341	99	cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src	3e-09
cd10354	77	cd10354, SH2_Cterm_RasGAP, C-terminal Src homology	2e-08
cd11830	54	cd11830, SH3_VAV_2, C-terminal (or second) Src hom	2e-08
cd09930	104	cd09930, SH2_cSH2_p85_like, C-terminal Src homolog	2e-08
cd10352	91	cd10352, SH2_a2chimerin_b2chimerin, Src homology 2	5e-08
cd11976	54	cd11976, SH3_VAV1_2, C-terminal (or second) Src ho	8e-08
cd09932	104	cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src	9e-08
cd11875	55	cd11875, SH3_CD2AP-like_3, Third Src Homology 3 do	1e-07
cd11842	55	cd11842, SH3_Ysc84p_like, Src homology 3 domain of	3e-07
cd11766	53	cd11766, SH3_Nck_2, Second Src Homology 3 domain o	4e-07
cd09934	104	cd09934, SH2_Tec_family, Src homology 2 (SH2) doma	4e-07
cd09935	94	cd09935, SH2_ABL, Src homology 2 (SH2) domain foun	5e-07
cd11985	53	cd11985, SH3_Stac2_C, C-terminal Src homology 3 do	5e-07
cd09945	98	cd09945, SH2_SHB_SHD_SHE_SHF_like, Src homology 2	7e-07
cd09933	101	cd09933, SH2_Src_family, Src homology 2 (SH2) doma	8e-07
cd09931	99	cd09931, SH2_C-SH2_SHP_like, C-terminal Src homolo	9e-07
cd00174	51	cd00174, SH3, Src Homology 3 domain superfamily	2e-06
cd11977	58	cd11977, SH3_VAV2_2, C-terminal (or second) Src ho	2e-06
cd11841	54	cd11841, SH3_SH3YL1_like, Src homology 3 domain of	2e-06
cd12059	58	cd12059, SH3_MLK1-3, Src Homology 3 domain of Mixe	2e-06
cd11978	56	cd11978, SH3_VAV3_2, C-terminal (or second) Src ho	3e-06
cd11833	53	cd11833, SH3_Stac_1, First C-terminal Src homology	8e-06
cd12142	55	cd12142, SH3_D21-like, Src Homology 3 domain of SH	8e-06
pfam00018	47	pfam00018, SH3_1, SH3 domain	8e-06
cd11883	55	cd11883, SH3_Sdc25, Src Homology 3 domain of Sdc25	8e-06
cd10399	106	cd10399, SH2_Tec_Bmx, Src homology 2 (SH2) domain	1e-05
smart00326	56	smart00326, SH3, Src homology 3 domains	2e-05
cd09937	98	cd09937, SH2_csk_like, Src homology 2 (SH2) domain	2e-05
cd10361	90	cd10361, SH2_Fps_family, Src homology 2 (SH2) doma	3e-05
cd10397	106	cd10397, SH2_Tec_Btk, Src homology 2 (SH2) domain	4e-05
cd10396	108	cd10396, SH2_Tec_Itk, Src homology 2 (SH2) domain	4e-05
cd10398	106	cd10398, SH2_Tec_Txk, Src homology 2 (SH2) domain	6e-05
cd10415	108	cd10415, SH2_Grb10, Src homology 2 (SH2) domain fo	1e-04
cd09943	93	cd09943, SH2_Nck_family, Src homology 2 (SH2) doma	1e-04
cd10357	87	cd10357, SH2_ShkD_ShkE, Src homology 2 (SH2) domai	2e-04
cd11805	53	cd11805, SH3_GRB2_like_C, C-terminal Src homology	2e-04
cd10388	101	cd10388, SH2_SOCS7, Src homology 2 (SH2) domain fo	3e-04
cd11876	58	cd11876, SH3_MLK, Src Homology 3 domain of Mixed L	3e-04
cd11951	53	cd11951, SH3_GRAP_C, C-terminal Src homology 3 dom	3e-04
cd11771	60	cd11771, SH3_Pex13p_fungal, Src Homology 3 domain	3e-04
cd10370	96	cd10370, SH2_Src_Src42, Src homology 2 (SH2) domai	3e-04
cd10369	96	cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain	3e-04
cd10408	97	cd10408, SH2_Nck1, Src homology 2 (SH2) domain fou	4e-04
cd11768	54	cd11768, SH3_Tec_like, Src Homology 3 domain of Te	4e-04
cd12009	54	cd12009, SH3_Blk, Src homology 3 domain of Blk Pro	0.001
cd11858	55	cd11858, SH3_Myosin-I_fungi, Src homology 3 domain	0.001
cd09944	108	cd09944, SH2_Grb7_family, Src homology 2 (SH2) dom	0.001
cd09926	106	cd09926, SH2_CRK_like, Src homology 2 domain found	0.002
cd10414	108	cd10414, SH2_Grb14, Src homology 2 (SH2) domain fo	0.002
cd11905	56	cd11905, SH3_Tec, Src Homology 3 domain of Tec (Ty	0.002
cd10355	92	cd10355, SH2_DAPP1_BAM32_like, Src homology 2 doma	0.002
cd11843	53	cd11843, SH3_PACSIN, Src homology 3 domain of Prot	0.003
cd11986	53	cd11986, SH3_Stac3_1, First C-terminal Src homolog	0.003
cd11948	54	cd11948, SH3_GRAP_N, N-terminal Src homology 3 dom	0.004
cd11865	55	cd11865, SH3_Nbp2-like, Src Homology 3 domain of S	0.004

>gnl|CDD|198193 cd09940, SH2_Vav_family, Src homology 2 (SH2) domain found in the Vav family

 Score =  148 bits (377), Expect = 9e-46
 Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 8/109 (7%)

Query: 85  LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
           LSE+LWFVGEM R+ A + LE   DGTYL+R+RPQG     ET YALS+K +  VKHMK+
Sbjct: 2   LSEFLWFVGEMERDTAENRLENRPDGTYLVRVRPQG-----ETQYALSIKYNGDVKHMKI 56

Query: 145 YEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF 193
            ++       Y+LS+SR+F+S+VEL+  YERNSL ENF GL+  L+ P+
Sbjct: 57  EQRSDGL---YYLSESRHFKSLVELVNYYERNSLGENFAGLDTTLKWPY 102

Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, Vav2 and Vav3 are more ubiquitously expressed. The members here include insect and amphibian Vavs. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 102

>gnl|CDD|214585 smart00252, SH2, Src homology 2 domains

 Score = 80.7 bits (200), Expect = 1e-19
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 90  WFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEM 149
           W+ G + RE+A  LL+ E DG +L+R     P       Y LS++   KVKH ++   E 
Sbjct: 3   WYHGFISREEAEKLLKNEGDGDFLVRDSESSPGD-----YVLSVRVKGKVKHYRIRRNED 57

Query: 150 DGVPQYFLSQSRYFRSIVELICCYERNSL 178
               +++L   R F S+VEL+  Y++NSL
Sbjct: 58  G---KFYLEGGRKFPSLVELVEHYQKNSL 83

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae. Length = 84

>gnl|CDD|198268 cd10405, SH2_Vav1, Src homology 2 (SH2) domain found in the Vav1 proteins

 Score = 79.3 bits (195), Expect = 8e-19
 Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 9/112 (8%)

Query: 84  NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMK 143
           +LS +LW+ G M R  A S+L   +DGTYL+R R +         +A+S+K + +VKH+K
Sbjct: 1   DLSVHLWYAGPMERAGAESILANRSDGTYLVRQRVKDAAE-----FAISIKYNVEVKHIK 55

Query: 144 VYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
           +   E  G+  Y +++ + FR + EL+  Y++NSL + F  L+  LQ PF++
Sbjct: 56  IMTAE--GL--YRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKE 103

Proto-oncogene vav is a member of the Dbl family of guanine nucleotide exchange factors (GEF) for the Rho family of GTP binding proteins. All vavs are activated by tyrosine phosphorylation leading to their activation. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, and Vav2 and Vav3 are more ubiquitously expressed. Vav1 plays a role in T-cell and B-cell development and activation. It has been identified as the specific binding partner of Nef proteins from HIV-1, resulting in morphological changes, cytoskeletal rearrangements, and the JNK/SAPK signaling cascade, leading to increased levels of viral transcription and replication. Vav1 has been shown to interact with Ku70, PLCG1, Lymphocyte cytosolic protein 2, Janus kinase 2, SIAH2, S100B, Abl gene, ARHGDIB, SHB, PIK3R1, PRKCQ, Grb2, MAPK1, Syk, Linker of activated T cells, Cbl gene and EZH2. Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198269 cd10406, SH2_Vav2, Src homology 2 (SH2) domain found in the Vav2 proteins

 Score = 72.4 bits (177), Expect = 2e-16
 Identities = 38/109 (34%), Positives = 67/109 (61%), Gaps = 9/109 (8%)

Query: 86  SEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVY 145
           + Y WF G M R++  +LL+  A GTYL+R RP          +A+S+K +++VKH+KV 
Sbjct: 3   TAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAER-----FAISIKFNDEVKHIKVV 57

Query: 146 EKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR 194
           EK+        +++++ F S++EL+  Y+ +SL E+F  L+  L+ P++
Sbjct: 58  EKD----NWIHITEAKKFESLLELVEYYQCHSLKESFKQLDTTLKYPYK 102

Proto-oncogene vav is a member of the Dbl family of guanine nucleotide exchange factors (GEF) for the Rho family of GTP binding proteins. All vavs are activated by tyrosine phosphorylation leading to their activation. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, and Vav2 and Vav3 are more ubiquitously expressed. Vav2 is a GEF for RhoA, RhoB and RhoG and may activate Rac1 and Cdc42. Vav2 has been shown to interact with CD19 and Grb2. Alternatively spliced transcript variants encoding different isoforms have been found for Vav2. Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|198270 cd10407, SH2_Vav3, Src homology 2 (SH2) domain found in the Vav3 proteins

 Score = 70.4 bits (172), Expect = 2e-15
 Identities = 36/110 (32%), Positives = 64/110 (58%), Gaps = 9/110 (8%)

Query: 86  SEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVY 145
           S   W+ G M R +A + L    + TYL+R R +         YA+S+K + +VKH+K+ 
Sbjct: 3   SCQPWYAGAMERLQAETELINRVNSTYLVRHRTKESGE-----YAISIKYNNEVKHIKIL 57

Query: 146 EKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
            +  DG   + ++++R F+S++EL+  Y+ +SL E F  L+  LQ P+++
Sbjct: 58  TR--DGF--FHIAENRKFKSLMELVEYYKHHSLKEGFRSLDTTLQFPYKE 103

Proto-oncogene vav is a member of the Dbl family of guanine nucleotide exchange factors (GEF) for the Rho family of GTP binding proteins. All vavs are activated by tyrosine phosphorylation leading to their activation. There are three Vav mammalian family members: Vav1 which is expressed in the hematopoietic system, and Vav2 and Vav3 are more ubiquitously expressed. Vav3 preferentially activates RhoA, RhoG and, to a lesser extent, Rac1. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. VAV3 has been shown to interact with Grb2. Vav proteins are involved in several processes that require cytoskeletal reorganization, such as the formation of the immunological synapse (IS), phagocytosis, platelet aggregation, spreading, and transformation. Vavs function as guanine nucleotide exchange factors (GEFs) for the Rho/Rac family of GTPases. Vav family members have several conserved motifs/domains including: a leucine-rich region, a leucine-zipper, a calponin homology (CH) domain, an acidic domain, a Dbl-homology (DH) domain, a pleckstrin homology (PH) domain, a cysteine-rich domain, 2 SH3 domains, a proline-rich region, and a SH2 domain. Vavs are the only known Rho GEFs that have both the DH/PH motifs and SH2/SH3 domains in the same protein. The leucine-rich helix-loop-helix (HLH) domain is thought to be involved in protein heterodimerization with other HLH proteins and it may function as a negative regulator by forming inactive heterodimers. The CH domain is usually involved in the association with filamentous actin, but in Vav it controls NFAT stimulation, Ca2+ mobilization, and its transforming activity. Acidic domains are involved in protein-protein interactions and contain regulatory tyrosines. The DH domain is a GDP-GTP exchange factor on Rho/Rac GTPases. The PH domain in involved in interactions with GTP-binding proteins, lipids and/or phosphorylated serine/threonine residues. The SH3 domain is involved in localization of proteins to specific sites within the cell interacting with protein with proline-rich sequences. The SH2 domain mediates a high affinity interaction with tyrosine phosphorylated proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 103

>gnl|CDD|215658 pfam00017, SH2, SH2 domain

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 9/82 (10%)

Query: 90  WFVGEMGREKATSLL-EREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           W+ G++ RE+A  LL   + DGT+L+R      + P +  Y LS++ D +VKH ++   +
Sbjct: 1   WYHGKISREEAERLLLNPKPDGTFLVRESE---SKPGD--YTLSVRDDGRVKHYRIQSLD 55

Query: 149 MDGVPQYFLSQSRYFRSIVELI 170
             G   Y++S    F S+ EL+
Sbjct: 56  NGG---YYISGGVTFNSLPELV 74

Length = 77

>gnl|CDD|198173 cd00173, SH2, Src homology 2 (SH2) domain

 Score = 63.2 bits (154), Expect = 3e-13
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 8/82 (9%)

Query: 90  WFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDE-KVKHMKVYEKE 148
           WF G + RE+A  LL  + DGT+L+R     P       Y LS+++ + KVKH  +   E
Sbjct: 2   WFHGSISREEAERLLRGKPDGTFLVRESSSEPGD-----YVLSVRSGDGKVKHYLIERNE 56

Query: 149 MDGVPQYFLSQSRYFRSIVELI 170
                       R F S+ EL+
Sbjct: 57  GGY--YLLGGSGRTFPSLPELV 76

In general, SH2 domains are involved in signal transduction; they bind pTyr-containing polypeptide ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. They are present in a wide array of proteins including: adaptor proteins (Nck1, Crk, Grb2), scaffolds (Slp76, Shc, Dapp1), kinases (Src, Syk, Fps, Tec), phosphatases (Shp-1, Shp-2), transcription factors (STAT1), Ras signaling molecules (Ras-Gap), ubiquitination factors (c-Cbl), cytoskeleton regulators (Tensin), signal regulators (SAP), and phospholipid second messengers (PLCgamma), amongst others. Length = 79

>gnl|CDD|198195 cd09942, SH2_nSH2_p85_like, N-terminal Src homology 2 (nSH2) domain found in p85

 Score = 55.0 bits (133), Expect = 6e-10
 Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 9/110 (8%)

Query: 85  LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
           L E  W+ G++ RE+    +    DGT+L+R      T   +  Y L+L+     K +K+
Sbjct: 4   LQEAEWYWGDISREEVNEKMRDTPDGTFLVR---DASTMKGD--YTLTLRKGGNNKLIKI 58

Query: 145 YEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR 194
           + +  DG  +Y  S    F S+VELI  Y  NSL E    L+V+L  P  
Sbjct: 59  FHR--DG--KYGFSDPLTFNSVVELINYYRNNSLAEYNRKLDVKLLYPVS 104

Phosphoinositide 3-kinases (PI3Ks) are essential for cell growth, migration, and survival. p110, the catalytic subunit, is composed of an adaptor-binding domain, a Ras-binding domain, a C2 domain, a helical domain, and a kinase domain. The regulatory unit is called p85 and is composed of an SH3 domain, a RhoGap domain, a N-terminal SH2 (nSH2) domain, an internal SH2 (iSH2) domain, and C-terminal (cSH2) domain. There are 2 inhibitory interactions between p110alpha and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110alpha and (2) p85 iSH2 domain with C2 domain of p110alpha. There are 3 inhibitory interactions between p110beta and p85 of P13K: (1) p85 nSH2 domain with the C2, helical, and kinase domains of p110beta, (2) p85 iSH2 domain with C2 domain of p110alpha, and (3) p85 cSH2 domain with the kinase domain of p110alpha. It is interesting to note that p110beta is oncogenic as a wild type protein while p110alpha lacks this ability. One explanation is the idea that the regulation of p110beta by p85 is unique because of the addition of inhibitory contacts from the cSH2 domain and the loss of contacts in the iSH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 110

>gnl|CDD|199829 cd10341, SH2_N-SH2_PLC_gamma_like, N-terminal Src homology 2 (N-SH2) domain in Phospholipase C gamma

 Score = 53.1 bits (128), Expect = 3e-09
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 10/94 (10%)

Query: 90  WFVGEM--GREKATSLLEREA---DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
           WF G++  GR++A  LL       DGT+L+R   +  T   +  Y LS   + KV+H ++
Sbjct: 6   WFHGKLGDGRDEAEKLLLEYCEGGDGTFLVR---ESETFVGD--YTLSFWRNGKVQHCRI 60

Query: 145 YEKEMDGVPQYFLSQSRYFRSIVELICCYERNSL 178
             ++ +G  +Y+L+ +  F S+ ELI  Y +N L
Sbjct: 61  RSRQENGEKKYYLTDNLVFDSLYELIDYYRQNPL 94

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|198217 cd10354, SH2_Cterm_RasGAP, C-terminal Src homology 2 (SH2) domain found in Ras GTPase-activating protein 1 (GAP)

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 10/85 (11%)

Query: 90  WFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           WF G++ RE+A ++L +    G++L+R   +    P +  Y+LS + +E +KH K+    
Sbjct: 2   WFHGKISREEAYNMLVKVGGPGSFLVR---ESDNTPGD--YSLSFRVNEGIKHFKI---I 53

Query: 149 MDGVPQYFLSQSRYFRSIVELICCY 173
             G  Q+ +   RYF S+ ++I  Y
Sbjct: 54  PTGNNQFMMG-GRYFSSLDDVIDRY 77

RasGAP is part of the GAP1 family of GTPase-activating proteins. The protein is located in the cytoplasm and stimulates the GTPase activity of normal RAS p21, but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in RAS inactivation, thereby allowing control of cellular proliferation and differentiation. Mutations leading to changes in the binding sites of either protein are associated with basal cell carcinomas. Alternative splicing results in two isoforms. The shorter isoform which lacks the N-terminal hydrophobic region, has the same activity, and is expressed in placental tissues. In general longer isoform contains 2 SH2 domains, a SH3 domain, a pleckstrin homology (PH) domain, and a calcium-dependent phospholipid-binding C2 domain. The C-terminus contains the catalytic domain of RasGap which catalyzes the activation of Ras by hydrolyzing GTP-bound active Ras into an inactive GDP-bound form of Ras. This model contains the C-terminal SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 77

>gnl|CDD|212764 cd11830, SH3_VAV_2, C-terminal (or second) Src homology 3 domain of VAV proteins

 Score = 49.6 bits (118), Expect = 2e-08
 Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
            A A +DFC  +  +L LK+G  V + +K+G+Q GWW+G+I+ R+ +F   Y
Sbjct: 1   TAKARYDFCARDMRELSLKEGDVVKIYNKKGQQ-GWWRGEINGRIGWFPSTY 51

VAV proteins function both as cytoplasmic guanine nucleotide exchange factors (GEFs) for Rho GTPases and scaffold proteins and they play important roles in cell signaling by coupling cell surface receptors to various effector functions. They play key roles in processes that require cytoskeletal reorganization including immune synapse formation, phagocytosis, cell spreading, and platelet aggregation, among others. Vertebrates have three VAV proteins (VAV1, VAV2, and VAV3). VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|198184 cd09930, SH2_cSH2_p85_like, C-terminal Src homology 2 (cSH2) domain found in p85

 Score = 50.9 bits (122), Expect = 2e-08
 Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 13/108 (12%)

Query: 87  EYLWFVGEMGREKATSLLEREADGTYLLRIRP-QGPTHPNETIYALSLKTDEKVKHMKVY 145
           E  W VG++ R +A  LL  + DGT+L+R    QG        YA S+  + +VKH  +Y
Sbjct: 5   ERTWLVGDINRTQAEELLRGKPDGTFLIRESSTQGC-------YACSVVCNGEVKHCVIY 57

Query: 146 EKEMDGVPQY-FLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           + E      Y F      + S+ EL+  Y  NSL ++   L V L  P
Sbjct: 58  KTETG----YGFAEPYNLYESLKELVLHYAHNSLEQHNDSLTVTLAYP 101

Phosphoinositide 3-kinases (PI3Ks) are essential for cell growth, migration, and survival. p110, the catalytic subunit, is composed of an adaptor-binding domain, a Ras-binding domain, a C2 domain, a helical domain, and a kinase domain. The regulatory unit is called p85 and is composed of an SH3 domain, a RhoGap domain, a N-terminal SH2 (nSH2) domain, a inter SH2 (iSH2) domain, and C-terminal (cSH2) domain. There are 2 inhibitory interactions between p110alpha and p85 of P13K: 1) p85 nSH2 domain with the C2, helical, and kinase domains of p110alpha and 2) p85 iSH2 domain with C2 domain of p110alpha. There are 3 inhibitory interactions between p110beta and p85 of P13K: 1) p85 nSH2 domain with the C2, helical, and kinase domains of p110beta, 2) p85 iSH2 domain with C2 domain of p110alpha, and 3) p85 cSH2 domain with the kinase domain of p110alpha. It is interesting to note that p110beta is oncogenic as a wild type protein while p110alpha lacks this ability. One explanation is the idea that the regulation of p110beta by p85 is unique because of the addition of inhibitory contacts from the cSH2 domain and the loss of contacts in the iSH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198215 cd10352, SH2_a2chimerin_b2chimerin, Src homology 2 (SH2) domain found in alpha2-chimerin and beta2-chimerin proteins

 Score = 49.3 bits (118), Expect = 5e-08
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 12/93 (12%)

Query: 91  FVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMD 150
           + G + RE+A  LL   +DG+YL+R   +   +     Y LSL+ + KVK+ K+Y    D
Sbjct: 9   YHGLISREEAEQLLSGASDGSYLIRESSRDDGY-----YTLSLRFNGKVKNYKLY---YD 60

Query: 151 GVPQYFLSQSRYFRSIVELICCYERNSLIENFI 183
           G   Y     + F +I +L+     + LI  ++
Sbjct: 61  GKNHYHYVGEKRFDTIHDLV----ADGLITLYM 89

Chimerins are a family of phorbol ester- and diacylglycerol-responsive GTPase-activating proteins. Alpha1-chimerin (formerly known as n-chimerin) and alpha2-chimerin are alternatively spliced products of a single gene, as are beta1- and beta2-chimerin. alpha1- and beta1-chimerin have a relatively short N-terminal region that does not encode any recognizable domains, whereas alpha2- and beta2-chimerin both include a functional SH2 domain that can bind to phosphotyrosine motifs within receptors. All of the isoforms contain a GAP domain with specificity in vitro for Rac1 and a diacylglycerol (DAG)-binding C1 domain which allows them to translocate to membranes in response to DAG signaling and anchors them in close proximity to activated Rac. Other C1 domain-containing diacylglycerol receptors including: PKC, Munc-13 proteins, phorbol ester binding scaffolding proteins involved in Ca2+-stimulated exocytosis, and RasGRPs, diacylglycerol-activated guanine-nucleotide exchange factors (GEFs) for Ras and Rap1. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 91

>gnl|CDD|212909 cd11976, SH3_VAV1_2, C-terminal (or second) Src homology 3 domain of VAV1 protein

 Score = 47.6 bits (113), Expect = 8e-08
 Identities = 21/48 (43%), Positives = 34/48 (70%), Gaps = 1/48 (2%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            A A +DFC  + ++L LK+G  + +L+K+G Q+GWW+G+I  RV +F
Sbjct: 1   TAKARYDFCARDRSELSLKEGDIIKILNKKG-QQGWWRGEIYGRVGWF 47

VAV1 is expressed predominantly in the hematopoietic system and it plays an important role in the development and activation of B and T cells. It is activated by tyrosine phosphorylation to function as a guanine nucleotide exchange factor (GEF) for Rho GTPases following cell surface receptor activation, triggering various effects such as cytoskeletal reorganization, transcription regulation, cell cycle progression, and calcium mobilization. It also serves as a scaffold protein and has been shown to interact with Ku70, Socs1, Janus kinase 2, SIAH2, S100B, Abl gene, ZAP-70, SLP76, and Syk, among others. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The C-terminal SH3 domain of Vav1 interacts with a wide variety of proteins including cytoskeletal regulators (zyxin), RNA-binding proteins (Sam68), transcriptional regulators, viral proteins, and dynamin 2. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|198186 cd09932, SH2_C-SH2_PLC_gamma_like, C-terminal Src homology 2 (C-SH2) domain in Phospholipase C gamma

 Score = 48.8 bits (117), Expect = 9e-08
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 14/98 (14%)

Query: 82  HENLSEYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVK 140
           HE+     WF   + RE+A  +L R   DG +L+R     P       +A+S + + K+K
Sbjct: 1   HESKE---WFHANLTREQAEEMLMRVPRDGAFLVRPSETDPN-----SFAISFRAEGKIK 52

Query: 141 HMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSL 178
           H ++   + +G  + F+  +  F S+VEL+  YE++ L
Sbjct: 53  HCRI---KQEG--RLFVIGTSQFESLVELVSYYEKHPL 85

Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|212808 cd11875, SH3_CD2AP-like_3, Third Src Homology 3 domain (SH3C) of CD2-associated protein and similar proteins

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 17/43 (39%), Positives = 28/43 (65%)

Query: 202 FDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           FD+     ++L L++G  V +LSK+ E KGWWKG+++ +   F
Sbjct: 6   FDYEAENEDELTLREGDIVTILSKDCEDKGWWKGELNGKRGVF 48

This subfamily is composed of the third SH3 domain (SH3C) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3C of both proteins have been shown to bind to ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212776 cd11842, SH3_Ysc84p_like, Src homology 3 domain of Ysc84p and similar fungal proteins

 Score = 45.9 bits (109), Expect = 3e-07
 Identities = 16/47 (34%), Positives = 23/47 (48%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           AVA +DF   +   L  ++G  + +L K   Q  WW G+I  R   F
Sbjct: 2   AVALYDFAGEQPGDLAFQKGDIITILKKSDSQNDWWTGRIGGREGIF 48

This family is composed of the Saccharomyces cerevisiae proteins, Ysc84p (also called LAS17-binding protein 4, Lsb4p) and Lsb3p, and similar fungal proteins. They contain an N-terminal SYLF domain (also called DUF500) and a C-terminal SH3 domain. Ysc84p localizes to actin patches and plays an important in actin polymerization during endocytosis. The N-terminal domain of both Ysc84p and Lsb3p can bind and bundle actin filaments. A study of the yeast SH3 domain interactome predicts that the SH3 domains of Lsb3p and Lsb4p may function as molecular hubs for the assembly of endocytic complexes. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212700 cd11766, SH3_Nck_2, Second Src Homology 3 domain of Nck adaptor proteins

 Score = 45.7 bits (109), Expect = 4e-07
 Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 2/48 (4%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            AV +F++     ++L L++G +V+VL K  +  GWW+G+ + +V +F
Sbjct: 1   PAVVKFNYEAQREDELSLRKGDRVLVLEKSSD--GWWRGECNGQVGWF 46

Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4), which show partly overlapping functions but also bind distinct targets. Their SH3 domains are involved in recruiting downstream effector molecules, such as the N-WASP/Arp2/3 complex, which when activated induces actin polymerization that results in the production of pedestals, or protrusions of the plasma membrane. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|198188 cd09934, SH2_Tec_family, Src homology 2 (SH2) domain found in Tec-like proteins

 Score = 47.0 bits (112), Expect = 4e-07
 Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 19/115 (16%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKT----DE 137
            NL +Y W+VG+M R++A SLL++E  +G +++R      +     +Y +SL T      
Sbjct: 1   LNLEKYEWYVGDMSRQRAESLLKQEDKEGCFVVR----NSSTKG--LYTVSLFTKVPGSP 54

Query: 138 KVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            VKH  + +       +++L++   F +I ELI  ++ NS      GL  RL+ P
Sbjct: 55  HVKHYHIKQNARS---EFYLAEKHCFETIPELINYHQHNS-----GGLATRLKYP 101

The Tec protein tyrosine kinase is the founding member of a family that includes Btk, Itk, Bmx, and Txk. The members have a PH domain, a zinc-binding motif, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. Btk is involved in B-cell receptor signaling with mutations in Btk responsible for X-linked agammaglobulinemia (XLA) in humans and X-linked immunodeficiency (xid) in mice. Itk is involved in T-cell receptor signaling. Tec is expressed in both T and B cells, and is thought to function in activated and effector T lymphocytes to induce the expression of genes regulated by NFAT transcription factors. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 104

>gnl|CDD|198189 cd09935, SH2_ABL, Src homology 2 (SH2) domain found in Abelson murine lymphosarcoma virus (ABL) proteins

 Score = 46.6 bits (111), Expect = 5e-07
 Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 88  YLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           + W+ G + R  A  LL    +G++L+R     P       Y++SL+ D +V H ++  +
Sbjct: 3   HSWYHGPISRNAAEYLLSSGINGSFLVRESESSPGQ-----YSISLRYDGRVYHYRI-SE 56

Query: 148 EMDGVPQYFLSQSRYFRSIVELICCYERNS 177
           + DG  + +++Q   F ++ EL+  + +N+
Sbjct: 57  DSDG--KVYVTQEHRFNTLAELVHHHSKNA 84

ABL-family proteins are highly conserved tyrosine kinases. Each ABL protein contains an SH3-SH2-TK (Src homology 3-Src homology 2-tyrosine kinase) domain cassette, which confers autoregulated kinase activity and is common among nonreceptor tyrosine kinases. Several types of posttranslational modifications control ABL catalytic activity, subcellular localization, and stability, with consequences for both cytoplasmic and nuclear ABL functions. Binding partners provide additional regulation of ABL catalytic activity, substrate specificity, and downstream signaling. By combining this cassette with actin-binding and -bundling domain, ABL proteins are capable of connecting phosphoregulation with actin-filament reorganization. Vertebrate paralogs, ABL1 and ABL2, have evolved to perform specialized functions. ABL1 includes nuclear localization signals and a DNA binding domain which is used to mediate DNA damage-repair functions, while ABL2 has additional binding capacity for actin and for microtubules to enhance its cytoskeletal remodeling functions. SH2 is involved in several autoinhibitory mechanism that constrain the enzymatic activity of the ABL-family kinases. In one mechanism SH2 and SH3 cradle the kinase domain while a cap sequence stabilizes the inactive conformation resulting in a locked inactive state. Another involves phosphatidylinositol 4,5-bisphosphate (PIP2) which binds the SH2 domain through residues normally required for phosphotyrosine binding in the linker segment between the SH2 and kinase domains. The SH2 domain contributes to ABL catalytic activity and target site specificity. It is thought that the ABL catalytic site and SH2 pocket have coevolved to recognize the same sequences. Recent work now supports a hierarchical processivity model in which the substrate target site most compatible with ABL kinase domain preferences is phosphorylated with greatest efficiency. If this site is compatible with the ABL SH2 domain specificity, it will then reposition and dock in the SH2 pocket. This mechanism also explains how ABL kinases phosphorylates poor targets on the same substrate if they are properly positioned and how relatively poor substrate proteins might be recruited to ABL through a complex with strong substrates that can also dock with the SH2 pocket. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 94

>gnl|CDD|212918 cd11985, SH3_Stac2_C, C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing protein 2 (Stac2)

 Score = 45.3 bits (107), Expect = 5e-07
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)

Query: 199 VAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           VA + F P E N LPL+ G +V+V+    E   WWKGK  +RV +F
Sbjct: 3   VALYKFLPQENNDLPLQPGDRVMVVDDSNED--WWKGKSGDRVGFF 46

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac2 contains a single SH3 domain at the C-terminus unlike Stac1 and Stac3, which contain two C-terminal SH3 domains. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|198198 cd09945, SH2_SHB_SHD_SHE_SHF_like, Src homology 2 domain found in SH2 domain-containing adapter proteins B, D, E, and F (SHB, SHD, SHE, SHF)

 Score = 46.3 bits (110), Expect = 7e-07
 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 9/90 (10%)

Query: 90  WFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEM 149
           W+ G + R +A SLL    +G+YL+R      +   +  Y+LSLK+ +   HM++   E 
Sbjct: 3   WYHGAITRIEAESLLRPCKEGSYLVR---NSESTKQD--YSLSLKSAKGFMHMRIQRNET 57

Query: 150 DGVPQYFLSQ-SRYFRSIVELICCYERNSL 178
               QY L Q SR F +I E+I  Y  N L
Sbjct: 58  G---QYILGQFSRPFETIPEMIRHYCLNKL 84

SHB, SHD, SHE, and SHF are SH2 domain-containing proteins that play various roles throughout the cell. SHB functions in generating signaling compounds in response to tyrosine kinase activation. SHB contains proline-rich motifs, a phosphotyrosine binding (PTB) domain, tyrosine phosphorylation sites, and a SH2 domain. SHB mediates certain aspects of platelet-derived growth factor (PDGF) receptor-, fibroblast growth factor (FGF) receptor-, neural growth factor (NGF) receptor TRKA-, T cell receptor-, interleukin-2 (IL-2) receptor- and focal adhesion kinase- (FAK) signaling. SRC-like FYN-Related Kinase FRK/RAK (also named BSK/IYK or GTK) and SHB regulate apoptosis, proliferation and differentiation. SHB promotes apoptosis and is also required for proper mitogenicity, spreading and tubular morphogenesis in endothelial cells. SHB also plays a role in preventing early cavitation of embryoid bodies and reduces differentiation to cells expressing albumin, amylase, insulin and glucagon. SHB is a multifunctional protein that has difference responses in different cells under various conditions. SHE is expressed in heart, lung, brain, and skeletal muscle, while expression of SHD is restricted to the brain. SHF is mainly expressed in skeletal muscle, brain, liver, prostate, testis, ovary, small intestine, and colon. SHD may be a physiological substrate of c-Abl and may function as an adapter protein in the central nervous system. It is also thought to be involved in apoptotic regulation. SHD contains five YXXP motifs, a substrate sequence preferred by Abl tyrosine kinases, in addition to a poly-proline rich region and a C-terminal SH2 domain. SHE contains two pTry protein binding domains, protein interaction domain (PID) and a SH2 domain, followed by a glycine-proline rich region, all of which are N-terminal to the phosphotyrosine binding (PTB) domain. SHF contains four putative tyrosine phosphorylation sites and an SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|199827 cd09933, SH2_Src_family, Src homology 2 (SH2) domain found in the Src family of non-receptor tyrosine kinases

 Score = 46.0 bits (110), Expect = 8e-07
 Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 20/110 (18%)

Query: 90  WFVGEMGREKATSLL--EREADGTYLLRIRPQGPTHPNETIYALSLKTDEK-----VKHM 142
           WF G++ R+ A  LL       GT+L+R   +  T P    Y+LS++  +      VKH 
Sbjct: 5   WFFGKIKRKDAEKLLLAPGNPRGTFLIR---ESETTPGA--YSLSVRDGDDARGDTVKHY 59

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           ++ + +  G   Y+++    F ++ EL+  Y +++      GL  RL +P
Sbjct: 60  RIRKLDNGG---YYITTRATFPTLQELVQHYSKDAD-----GLCCRLTVP 101

The Src family kinases are nonreceptor tyrosine kinases that have been implicated in pathways regulating proliferation, angiogenesis, invasion and metastasis, and bone metabolism. It is thought that transforming ability of Src is linked to its ability to activate key signaling molecules in these pathways, rather than through direct activity. As such blocking Src activation has been a target for drug companies. Src family members can be divided into 3 groups based on their expression pattern: 1) Src, Fyn, and Yes; 2) Blk, Fgr, Hck, Lck, and Lyn; and 3) Frk-related kinases Frk/Rak and Iyk/Bsk Of these, cellular c-Src is the best studied and most frequently implicated in oncogenesis. The c-Src contains five distinct regions: a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Src exists in both active and inactive conformations. Negative regulation occurs through phosphorylation of Tyr, resulting in an intramolecular association between phosphorylated Tyr and the SH2 domain of SRC, which locks the protein in a closed conformation. Further stabilization of the inactive state occurs through interactions between the SH3 domain and a proline-rich stretch of residues within the kinase domain. Conversely, dephosphorylation of Tyr allows SRC to assume an open conformation. Full activity requires additional autophosphorylation of a Tyr residue within the catalytic domain. Loss of the negative-regulatory C-terminal segment has been shown to result in increased activity and transforming potential. Phosphorylation of the C-terminal Tyr residue by C-terminal Src kinase (Csk) and Csk homology kinase results in increased intramolecular interactions and consequent Src inactivation. Specific phosphatases, protein tyrosine phosphatase a (PTPa) and the SH-containing phosphatases SHP1/SHP2, have also been shown to take a part in Src activation. Src is also activated by direct binding of focal adhesion kinase (Fak) and Crk-associated substrate (Cas) to the SH2 domain. SRC activity can also be regulated by numerous receptor tyrosine kinases (RTKs), such as Her2, epidermal growth factor receptor (EGFR), fibroblast growth factor receptor, platelet-derived growth factor receptor (PDGFR), and vascular endothelial growth factor receptor (VEGFR). In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|198185 cd09931, SH2_C-SH2_SHP_like, C-terminal Src homology 2 (C-SH2) domain found in SH2 domain Phosphatases (SHP) proteins

 Score = 46.1 bits (110), Expect = 9e-07
 Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 12/106 (11%)

Query: 90  WFVGEM-GREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDE-KVKHMKVYEK 147
           WF G + G+E    LLE+   G++L+R   +  + P +  + LS++TD+ KV H+ +  +
Sbjct: 2   WFHGHLSGKEAEKLLLEKGKPGSFLVR---ESQSKPGD--FVLSVRTDDDKVTHIMIRCQ 56

Query: 148 EMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF 193
                 +Y +     F S+ +L+  Y++N ++E   G  V L+ P 
Sbjct: 57  GG----KYDVGGGEEFDSLTDLVEHYKKNPMVE-TSGTVVHLKQPL 97

The SH2 domain phosphatases (SHP-1, SHP-2/Syp, Drosophila corkscrew (csw), and Caenorhabditis elegans Protein Tyrosine Phosphatase (Ptp-2)) are cytoplasmic signaling enzymes. They are both targeted and regulated by interactions of their SH2 domains with phosphotyrosine docking sites. These proteins contain two SH2 domains (N-SH2, C-SH2) followed by a tyrosine phosphatase (PTP) domain, and a C-terminal extension. Shp1 and Shp2 have two tyrosyl phosphorylation sites in their C-tails, which are phosphorylated differentially by receptor and nonreceptor PTKs. Csw retains the proximal tyrosine and Ptp-2 lacks both sites. Shp-binding proteins include receptors, scaffolding adapters, and inhibitory receptors. Some of these bind both Shp1 and Shp2 while others bind only one. Most proteins that bind a Shp SH2 domain contain one or more immuno-receptor tyrosine-based inhibitory motifs (ITIMs): [SIVL]xpYxx[IVL]. Shp1 N-SH2 domain blocks the catalytic domain and keeps the enzyme in the inactive conformation, and is thus believed to regulate the phosphatase activity of SHP-1. Its C-SH2 domain is thought to be involved in searching for phosphotyrosine activators. The SHP2 N-SH2 domain is a conformational switch; it either binds and inhibits the phosphatase, or it binds phosphoproteins and activates the enzyme. The C-SH2 domain contributes binding energy and specificity, but it does not have a direct role in activation. Csw SH2 domain function is essential, but either SH2 domain can fulfill this requirement. The role of the csw SH2 domains during Sevenless receptor tyrosine kinase (SEV) signaling is to bind Daughter of Sevenless rather than activated SEV. Ptp-2 acts in oocytes downstream of sheath/oocyte gap junctions to promote major sperm protein (MSP)-induced MAP Kinase (MPK-1) phosphorylation. Ptp-2 functions in the oocyte cytoplasm, not at the cell surface to inhibit multiple RasGAPs, resulting in sustained Ras activation. It is thought that MSP triggers PTP-2/Ras activation and ROS production to stimulate MPK-1 activity essential for oocyte maturation and that secreted MSP domains and Cu/Zn superoxide dismutases function antagonistically to control ROS and MAPK signaling. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 99

>gnl|CDD|212690 cd00174, SH3, Src Homology 3 domain superfamily

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYF 244
            A A +D+   + ++L  K+G  + VL K+ +  GWW+G++   R   F
Sbjct: 1   YARALYDYEAQDDDELSFKKGDIITVLEKDDD--GWWEGELNGGREGLF 47

Src Homology 3 (SH3) domains are protein interaction domains that bind proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. Thus, they are referred to as proline-recognition domains (PRDs). SH3 domains are less selective and show more diverse specificity compared to other PRDs. They have been shown to bind peptide sequences that lack the PxxP motif; examples include the PxxDY motif of Eps8 and the RKxxYxxY sequence in SKAP55. SH3 domain containing proteins play versatile and diverse roles in the cell, including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies, among others. Many members of this superfamily are adaptor proteins that associate with a number of protein partners, facilitating complex formation and signal transduction. Length = 51

>gnl|CDD|212910 cd11977, SH3_VAV2_2, C-terminal (or second) Src homology 3 domain of VAV2 protein

 Score = 44.2 bits (104), Expect = 2e-06
 Identities = 18/51 (35%), Positives = 31/51 (60%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
           AVA ++F   +  +L L++G  V + S+ G  +GWWKG+ + R+ +F   Y
Sbjct: 3   AVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTY 53

VAV2 is widely expressed and functions as a guanine nucleotide exchange factor (GEF) for RhoA, RhoB and RhoG and also activates Rac1 and Cdc42. It is implicated in many cellular and physiological functions including blood pressure control, eye development, neurite outgrowth and branching, EGFR endocytosis and degradation, and cell cluster morphology, among others. It has been reported to associate with Nek3. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212775 cd11841, SH3_SH3YL1_like, Src homology 3 domain of SH3 domain containing Ysc84-like 1 (SH3YL1) protein

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 13/48 (27%), Positives = 23/48 (47%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
              A + F   +   L  + G ++ VL++   Q  WW+G++  RV  F
Sbjct: 1   EVTALYSFEGQQPCDLSFQAGDRITVLTRTDSQFDWWEGRLRGRVGIF 48

SH3YL1 localizes to the plasma membrane and is required for dorsal ruffle formation. It binds phosphoinositides (PIs) with high affinity through its N-terminal SYLF domain (also called DUF500). In addition, SH3YL1 contains a C-terminal SH3 domain which has been reported to bind to N-WASP, dynamin 2, and SHIP2 (a PI 5-phosphatase). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212992 cd12059, SH3_MLK1-3, Src Homology 3 domain of Mixed Lineage Kinases 1, 2, and 3

 Score = 43.6 bits (103), Expect = 2e-06
 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 200 AEFDFCPTEANQLPLKQGCQVIVLSKEGE---QKGWWKGKIDERVSYF 244
           A FD+  +  ++L L++G +V VLSK+      +GWW GKI++RV  F
Sbjct: 4   AVFDYEASAEDELTLRRGDRVEVLSKDSAVSGDEGWWTGKINDRVGIF 51

MLKs 1, 2, and 3 are Serine/Threonine Kinases (STKs), catalyzing the transfer of the gamma-phosphoryl group from ATP to S/T residues on protein substrates. MLKs act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. Little is known about the specific function of MLK1, also called MAP3K9. It is capable of activating the c-Jun N-terminal kinase pathway. Mice lacking both MLK1 and MLK2 are viable, fertile, and have normal life spans. MLK2, also called MAP3K10, is abundant in brain, skeletal muscle, and testis. It functions upstream of the MAPK, c-Jun N-terminal kinase. It binds hippocalcin, a calcium-sensor protein that protects neurons against calcium-induced cell death. Both MLK2 and hippocalcin may be associated with the pathogenesis of Parkinson's disease. MLK3, also called MAP3K11, is highly expressed in breast cancer cells and its signaling through c-Jun N-terminal kinase has been implicated in the migration, invasion, and malignancy of cancer cells. It also functions as a negative regulator of Inhibitor of Nuclear Factor-KappaB Kinase (IKK) and thus, impacts inflammation and immunity. MLKs contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212911 cd11978, SH3_VAV3_2, C-terminal (or second) Src homology 3 domain of VAV3 protein

 Score = 43.5 bits (102), Expect = 3e-06
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
           IA+A +DFC  +  +L L +G  V + +K     GWW+G+++ RV +F   Y
Sbjct: 2   IAIARYDFCARDMRELSLLKGDVVKIYTKMSTN-GWWRGEVNGRVGWFPSTY 52

VAV3 is ubiquitously expressed and functions as a phosphorylation-dependent guanine nucleotide exchange factor (GEF) for RhoA, RhoG, and Rac1. It has been implicated to function in the hematopoietic, bone, cerebellar, and cardiovascular systems. VAV3 is essential in axon guidance in neurons that control blood pressure and respiration. It is overexpressed in prostate cancer cells and it plays a role in regulating androgen receptor transcriptional activity. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212767 cd11833, SH3_Stac_1, First C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing (Stac) proteins

 Score = 42.1 bits (99), Expect = 8e-06
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 199 VAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           VA + F P E   L ++ G ++ +L    E   WWKGKI++RV +F
Sbjct: 3   VALYKFKPQENEDLEMRPGDKITLLDDSNED--WWKGKIEDRVGFF 46

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac1 and Stac3 contain two SH3 domains while Stac2 contains a single SH3 domain at the C-terminus. This model represents the first C-terminal SH3 domain of Stac1 and Stac3, and the single C-terminal SH3 domain of Stac2. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|213018 cd12142, SH3_D21-like, Src Homology 3 domain of SH3 domain-containing protein 21 (SH3D21) and similar proteins

 Score = 42.1 bits (99), Expect = 8e-06
 Identities = 18/43 (41%), Positives = 30/43 (69%)

Query: 202 FDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           FD+ P   ++L LK+G  + V+SKE E +GWW+G+++ R  +F
Sbjct: 6   FDYNPVAPDELALKKGDVIEVISKETEDEGWWEGELNGRRGFF 48

N-terminal SH3 domain of the uncharacterized protein SH3 domain-containing protein 21, and similar uncharacterized domains, it belongs to the CD2AP-like_3 subfamily of proteins. The CD2AP-like_3 subfamily is composed of the third SH3 domain (SH3C) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3C of both proteins have been shown to bind to ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|215659 pfam00018, SH3_1, SH3 domain

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)

Query: 199 VAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           VA +D+   E ++L  K+G  +IVL K  +  GWWKG+
Sbjct: 1   VALYDYTAREPDELSFKKGDIIIVLEKSDD--GWWKGR 36

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 47

>gnl|CDD|212816 cd11883, SH3_Sdc25, Src Homology 3 domain of Sdc25/Cdc25 guanine nucleotide exchange factors

 Score = 41.9 bits (99), Expect = 8e-06
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVS 242
           + VA +DF P   NQL  K G  + VL+K  +  GWW G I     
Sbjct: 1   VVVALYDFTPKSKNQLSFKAGDIIYVLNK--DPSGWWDGVIISSSG 44

This subfamily is composed of the Saccharomyces cerevisiae guanine nucleotide exchange factors (GEFs) Sdc25 and Cdc25, and similar proteins. These GEFs regulate Ras by stimulating the GDP/GTP exchange on Ras. Cdc25 is involved in the Ras/PKA pathway that plays an important role in the regulation of metabolism, stress responses, and proliferation, depending on available nutrients and conditions. Proteins in this subfamily contain an N-terminal SH3 domain as well as REM (Ras exchanger motif) and RasGEF domains at the C-terminus. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 55

>gnl|CDD|198262 cd10399, SH2_Tec_Bmx, Src homology 2 (SH2) domain found in Tec protein, Bmx

 Score = 43.0 bits (101), Expect = 1e-05
 Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 4/96 (4%)

Query: 83  ENLSEYLWFVGEMGREKATSLL-EREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKH 141
           ENL  Y WF G + R ++  LL ++  +G +++R   Q   +   T+   S   ++K   
Sbjct: 1   ENLDAYDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMY---TVSLFSKAVNDKKGT 57

Query: 142 MKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNS 177
           +K Y    +   + +L+++  F SI +LI  ++ NS
Sbjct: 58  VKHYHVHTNAENKLYLAENYCFDSIPKLIHYHQHNS 93

A member of the Tec protein tyrosine kinase Bmx is expressed in the endothelium of large arteries, fetal endocardium, adult endocardium of the left ventricle, bone marrow, lung, testis, granulocytes, myeloid cell lines, and prostate cell lines. Bmx is involved in the regulation of Rho and serum response factor (SRF). Bmx has been shown to interact with PAK1, PTK2, PTPN21, and RUFY1. Most of the Tec family members have a PH domain (Txk and the short (type 1) splice variant of Drosophila Btk29A are exceptions), a Tec homology (TH) domain, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP. It is crucial for the function of Tec PH domains. It is not present in Txk and the type 1 splice form of the Drosophila homolog. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|214620 smart00326, SH3, Src homology 3 domains

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYF 244
             A +D+   + ++L  K+G  + VL K  +  GWWKG++   +   F
Sbjct: 5   VRALYDYTAQDPDELSFKKGDIITVLEKSDD--GWWKGRLGRGKEGLF 50

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations. Length = 56

>gnl|CDD|198190 cd09937, SH2_csk_like, Src homology 2 (SH2) domain found in Carboxyl-Terminal Src Kinase (Csk)

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 14/103 (13%)

Query: 90  WFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEM 149
           WF G++ RE+A  LL+   DG +L+R   +   +P +  Y L +  + KV+H +V  +  
Sbjct: 5   WFHGKISREEAERLLQPPEDGLFLVR---ESTNYPGD--YTLCVSFEGKVEHYRVIYRN- 58

Query: 150 DGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
               +  + +  YF ++++L+  Y +++      GL  RL  P
Sbjct: 59  ---GKLTIDEEEYFENLIQLVEHYTKDA-----DGLCTRLVKP 93

Both the C-terminal Src kinase (CSK) and CSK-homologous kinase (CHK) are members of the CSK-family of protein tyrosine kinases. These proteins suppress activity of Src-family kinases (SFK) by selectively phosphorylating the conserved C-terminal tail regulatory tyrosine by a similar mechanism. CHK is also capable of inhibiting SFKs by a non-catalytic mechanism that involves binding of CHK to SFKs to form stable protein complexes. The unphosphorylated form of SFKs is inhibited by CSK and CHK by a two-step mechanism. The first step involves the formation of a complex of SFKs with CSK/CHK with the SFKs in the complex are inactive. The second step, involves the phosphorylation of the C-terminal tail tyrosine of SFKs, which then dissociates and adopt an inactive conformation. The structural basis of how the phosphorylated SFKs dissociate from CSK/CHK to adopt the inactive conformation is not known. The inactive conformation of SFKs is stabilized by two intramolecular inhibitory interactions: (a) the pYT:SH2 interaction in which the phosphorylated C-terminal tail tyrosine (YT) binds to the SH2 domain, and (b) the linker:SH3 interaction of which the SH2-kinase domain linker binds to the SH3 domain. SFKs are activated by multiple mechanisms including binding of the ligands to the SH2 and SH3 domains to displace the two inhibitory intramolecular interactions, autophosphorylation, and dephosphorylation of YT. By selective phosphorylation and the non-catalytic inhibitory mechanism CSK and CHK are able to inhibit the active forms of SFKs. CSK and CHK are regulated by phosphorylation and inter-domain interactions. They both contain SH3, SH2, and kinase domains separated by the SH3-SH2 connector and SH2 kinase linker, intervening segments separating the three domains. They lack a conserved tyrosine phosphorylation site in the kinase domain and the C-terminal tail regulatory tyrosine phosphorylation site. The CSK SH2 domain is crucial for stabilizing the kinase domain in the active conformation. A disulfide bond here regulates CSK kinase activity. The subcellular localization and activity of CSK are regulated by its SH2 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 98

>gnl|CDD|198224 cd10361, SH2_Fps_family, Src homology 2 (SH2) domain found in feline sarcoma, Fujinami poultry sarcoma, and fes-related (Fes/Fps/Fer) proteins

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 8/96 (8%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
           ++L    ++ G + RE A  LL+   DG +L+R          +    LS++ D K++H 
Sbjct: 1   KDLENEPYYHGLLPREDAEELLKN--DGDFLVRKTEPKGGGKRK--LVLSVRWDGKIRHF 56

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSL 178
            +     DG  +Y++ + + F+SI ELI  Y++   
Sbjct: 57  VI--NRDDGG-KYYI-EGKSFKSISELINYYQKTKE 88

The Fps family consists of members Fps/Fes and Fer/Flk/Tyk3. They are cytoplasmic protein-tyrosine kinases implicated in signaling downstream from cytokines, growth factors and immune receptors. Fes/Fps/Fer contains three coiled-coil regions, an SH2 (Src-homology-2) and a TK (tyrosine kinase catalytic) domain signature. Members here include: Fps/Fes, Fer, Kin-31, and In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 90

>gnl|CDD|198260 cd10397, SH2_Tec_Btk, Src homology 2 (SH2) domain found in Tec protein, Bruton's tyrosine kinase (Btk)

 Score = 41.7 bits (98), Expect = 4e-05
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 11/110 (10%)

Query: 85  LSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDE-KVKHM 142
           L  Y W+   M R +A  LL++E  +G +++R   +       +++A S    +  ++H 
Sbjct: 3   LEMYEWYSKNMTRSQAEQLLKQEGKEGGFIVRDSSK-AGKYTVSVFAKSAGDPQGVIRHY 61

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            V         QY+L++   F +I ELI  ++ N+      GL  RL+ P
Sbjct: 62  VVCSTPQS---QYYLAEKHLFSTIPELINYHQHNA-----AGLISRLKYP 103

A member of the Tec protein tyrosine kinase Btk is expressed in bone marrow, spleen, all hematopoietic cells except T lymphocytes and plasma cells where it plays a crucial role in B cell maturation and mast cell activation. Btk has been shown to interact with GNAQ, PLCG2, protein kinase D1, B-cell linker, SH3BP5, caveolin 1, ARID3A, and GTF2I. Most of the Tec family members have a PH domain (Txk and the short (type 1) splice variant of Drosophila Btk29A are exceptions), a Tec homology (TH) domain, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. Btk is implicated in the primary immunodeficiency disease X-linked agammaglobulinemia (Bruton's agammaglobulinemia). The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP. It is crucial for the function of Tec PH domains and it's lack of presence in Txk is not surprising since it lacks a PH domain. The type 1 splice form of the Drosophila homolog also lacks both the PH domain and the Btk motif. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. Two tyrosine phosphorylation (pY) sites have been identified in Btk: one located in the activation loop of the catalytic domain which regulates the transition between open (active) and closed (inactive) states and the other in its SH3 domain. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|198259 cd10396, SH2_Tec_Itk, Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)

 Score = 41.3 bits (97), Expect = 4e-05
 Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 21/119 (17%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKT------ 135
            NL +Y W+   + R KA  LL  E  +G +++R   Q         Y +SL T      
Sbjct: 1   NNLDQYEWYNKNINRSKAEKLLRDEGKEGGFMVRDSSQPGL------YTVSLYTKAGGEG 54

Query: 136 DEKVKHMKVYEKEMDGVP-QYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF 193
           +  ++H  +  KE +  P +Y+L++   F SI ELI  ++ N+      GL  RL+ P 
Sbjct: 55  NPCIRHYHI--KETNDSPKKYYLAEKHVFNSIPELIEYHKHNA-----AGLVTRLRYPV 106

A member of the Tec protein tyrosine kinase Itk is expressed thymus, spleen, lymph node, T lymphocytes, NK and mast cells. It plays a role in T-cell proliferation and differentiation, analogous to Tec family kinases Txk. Itk has been shown to interact with Fyn, Wiskott-Aldrich syndrome protein, KHDRBS1, PLCG1, Lymphocyte cytosolic protein 2, Linker of activated T cells, Karyopherin alpha 2, Grb2, and Peptidylprolyl isomerase A. Most of the Tec family members have a PH domain (Txk and the short (type 1) splice variant of Drosophila Btk29A are exceptions), a Tec homology (TH) domain, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP. It is crucial for the function of Tec PH domains and it's lack of presence in Txk is not surprising since it lacks a PH domain. The type 1 splice form of the Drosophila homolog also lacks both the PH domain and the Btk motif. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|198261 cd10398, SH2_Tec_Txk, Src homology 2 (SH2) domain found in Tec protein, Txk

 Score = 41.1 bits (96), Expect = 6e-05
 Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 17/116 (14%)

Query: 84  NLSEYLWFVGEMGREKATSLLEREA-DGTYLLR-IRPQGPTHPNETIYALSLKTDEKVKH 141
           NL  Y W+   + R +A  LL +E+ +G +++R  R  G        Y +S+ T  +   
Sbjct: 2   NLEIYEWYHKNITRNQAERLLRQESKEGAFIVRDSRHLG-------SYTISVFTRARRST 54

Query: 142 ---MKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR 194
              +K Y+ + +   Q+++++   F+SI ELI  ++ N+      GL  RL+ P  
Sbjct: 55  EASIKHYQIKKNDSGQWYVAERHLFQSIPELIQYHQHNA-----AGLMSRLRYPVG 105

A member of the Tec protein tyrosine kinase Txk is expressed in thymus, spleen, lymph node, T lymphocytes, NK cells, mast cell lines, and myeloid cell line. Txk plays a role in TCR signal transduction, T cell development, and selection which is analogous to the function of Itk. Txk has been shown to interact with IFN-gamma. Unlike most of the Tec family members Txk lacks a PH domain. Instead Txk has a unique region containing a palmitoylated cysteine string which has a similar membrane tethering function as the PH domain. Txk also has a zinc-binding motif, a SH3 domain, a SH2 domain, and a protein kinase catalytic domain. The TH domain consists of a Zn2+-binding Btk motif and a proline-rich region. The Btk motif is found in Tec kinases, Ras GAP, and IGBP and crucial to the function of the PH domain. It is not present in Txk which is not surprising since it lacks a PH domain. The type 1 splice form of the Drosophila homolog also lacks both the PH domain and the Btk motif. The proline-rich regions are highly conserved for the most part with the exception of Bmx whose residues surrounding the PXXP motif are not conserved (TH-like) and Btk29A which is entirely unique with large numbers of glycine residues (TH-extended). Tec family members all lack a C-terminal tyrosine having an autoinhibitory function in its phosphorylated state. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|198278 cd10415, SH2_Grb10, Src homology 2 (SH2) domain found in the growth factor receptor bound, subclass 10 (Grb10) proteins

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 12/93 (12%)

Query: 89  LWFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYE 146
            WF G + RE++  +++++   DG +LLR      +  N   + L+L   +K+K+ ++  
Sbjct: 6   HWFHGRISREESHRIIKQQGLVDGLFLLR-----DSQSNPKAFVLTLCHHQKIKNFQILP 60

Query: 147 KEMDGVPQYFLS---QSRYFRSIVELICCYERN 176
            E DG  Q F S    +  F  +++L+  Y+ N
Sbjct: 61  CEDDG--QTFFSLDDGNTKFSDLIQLVDFYQLN 91

The Grb family binds to the epidermal growth factor receptor (EGFR, erbB1) via their SH2 domains. Grb10 is part of the Grb7 family of proteins which also includes Grb7, and Grb14. They are composed of an N-terminal Proline-rich domain, a Ras Associating-like (RA) domain, a Pleckstrin Homology (PH) domain, a phosphotyrosine interaction region (PIR, BPS) and a C-terminal SH2 domain. The SH2 domains of Grb7, Grb10 and Grb14 preferentially bind to a different RTK. Grb10 has been shown to interact with many different proteins, including the insulin and IGF1 receptors, platelet-derived growth factor (PDGF) receptor-beta, Ret, Kit, Raf1 and MEK1, and Nedd4. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|198196 cd09943, SH2_Nck_family, Src homology 2 (SH2) domain found in the Nck family

 Score = 39.8 bits (93), Expect = 1e-04
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 11/93 (11%)

Query: 90  WFVGEMGREKA-TSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           W+ G + R +A T L E   +G +L+R      ++P +  Y++SLK   + KH KV    
Sbjct: 3   WYYGRITRHQAETLLNEHGHEGDFLIR---DSESNPGD--YSVSLKAPGRNKHFKVQVV- 56

Query: 149 MDGVPQYFLSQSRYFRSIVELICCYERNSLIEN 181
            D V  Y + Q R F ++ EL+  Y++  +  +
Sbjct: 57  -DNV--YCIGQ-RKFHTMDELVEHYKKAPIFTS 85

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 93

>gnl|CDD|198220 cd10357, SH2_ShkD_ShkE, Src homology 2 (SH2) domain found in SH2 domain-bearing protein kinases D and E (ShkD and ShkE)

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 6/71 (8%)

Query: 85  LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
           L    WF G++ R++A   L    +GT+L+R+     T P +T + +S K   K  H ++
Sbjct: 7   LLAKSWFHGDISRDEAEKRLRGRPEGTFLIRL---SSTDPKKTPFTISKKKKSKPVHKRI 63

Query: 145 YEKEMDGVPQY 155
                  V  Y
Sbjct: 64  ---SRIDVNNY 71

SH2-bearing genes cloned from Dictyostelium include two transcription factors, STATa and STATc, and a signaling factor, SHK1 (shkA). A database search of the Dictyostelium discoideum genome revealed two additional putative STAT sequences, dd-STATb and dd-STATd, and four additional putative SHK genes, dd-SHK2 (shkB), dd-SHK3 (shkC), dd-SHK4 (shkD), and dd-SHK5 (shkE). This model contains members of shkD and shkE. All of the SHK members are most closely related to the protein kinases found in plants. However these kinases in plants are not conjugated to any SH2 or SH2-like sequences. Alignment data indicates that the SHK SH2 domains carry some features of the STAT SH2 domains in Dictyostelium. When STATc's linker domain was used for a BLAST search, the sequence between the protein kinase domain and the SH2 domain (the linker) of SHK was recovered, suggesting a close relationship among these molecules within this region. SHK's linker domain is predicted to contain an alpha-helix which is indeed homologous to that of STAT. Based on the phylogenetic alignment, SH2 domains can be grouped into two categories, STAT-type and Src-type. SHK family members are in between, but are closer to the STAT-type which indicates a close relationship between SHK and STAT families in their SH2 domains and further supports the notion that SHKs linker-SH2 domain evolved from STAT or STATL (STAT-like Linker-SH2) domain found in plants. In SHK, STAT, and SPT6, the linker-SH2 domains all reside exclusively in the C-terminal regions. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 87

>gnl|CDD|212739 cd11805, SH3_GRB2_like_C, C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2 (GRB2) and related proteins

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 200 AEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A +DF P E  +L  ++G  + VL        WWKG++  RV  F
Sbjct: 4   ALYDFNPQEPGELEFRRGDIITVLDSSDPD--WWKGELRGRVGIF 46

This family includes the adaptor protein GRB2 and related proteins including Drosophila melanogaster Downstream of receptor kinase (DRK), Caenorhabditis elegans Sex muscle abnormal protein 5 (Sem-5), GRB2-related adaptor protein (GRAP), GRAP2, and similar proteins. Family members contain an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. GRB2/Sem-5/DRK is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. GRAP2 plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. GRAP acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. The C-terminal SH3 domains (SH3c) of GRB2 and GRAP2 have been shown to bind to classical PxxP motif ligands, as well as to non-classical motifs. GRB2 SH3c binds Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, while the SH3c of GRAP2 binds to the phosphatase-like protein HD-PTP via a RxxxxK motif. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|198251 cd10388, SH2_SOCS7, Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins

 Score = 38.9 bits (91), Expect = 3e-04
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
             L +  W+ G M  E A  +L  + DG++L+R       +    I++LS ++   V H 
Sbjct: 5   RELKDCGWYWGPMSWEDAEKVLSNKPDGSFLVR-DSSDDRY----IFSLSFRSQGSVHHT 59

Query: 143 KVYEKEMD---GVPQYFLSQSRYFRSIVELI 170
           ++ + +     G    F+ +S   +S+VE I
Sbjct: 60  RIEQYQGTFSLGSRNKFVDRS---QSLVEFI 87

SH2 domain found in SOCS proteins. SOCS was first recognized as a group of cytokine-inducible SH2 (CIS) domain proteins comprising eight family members in human (CIS and SOCS1-SOCS7). In addition to the SH2 domain, SOCS proteins have a variable N-terminal domain and a conserved SOCS box in the C-terminal domain. SOCS proteins bind to a substrate via their SH2 domain. The prototypical members, CIS and SOCS1-SOCS3, have been shown to regulate growth hormone signaling in vitro and in a classic negative feedback response compete for binding at phosphotyrosine sites in JAK kinase and receptor pathways to displace effector proteins and target bound receptors for proteasomal degradation. Loss of SOCS activity results in excessive cytokine signaling associated with a variety of hematopoietic, autoimmune, and inflammatory diseases and certain cancers. Members (SOCS4-SOCS7) were identified by their conserved SOCS box, an adapter motif of 3 helices that associates substrate binding domains, such as the SOCS SH2 domain, ankryin, and WD40 with ubiquitin ligase components. These show limited cytokine induction. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 101

>gnl|CDD|212809 cd11876, SH3_MLK, Src Homology 3 domain of Mixed Lineage Kinases

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 199 VAEFDFCPTEANQLPLKQGCQVIVLSKEGE---QKGWWKGKIDERVSYF 244
            A FD+     ++L L++G  V VLSK+      +GWW GKI ++V  F
Sbjct: 3   TALFDYDARGEDELTLRRGQPVEVLSKDAAVSGDEGWWTGKIGDKVGIF 51

MLKs are Serine/Threonine Kinases (STKs), catalyzing the transfer of the gamma-phosphoryl group from ATP to S/T residues on protein substrates. MLKs act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. Mammals have four MLKs (MLK1-4), mostly conserved in vertebrates, which contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212884 cd11951, SH3_GRAP_C, C-terminal Src homology 3 domain of GRB2-related adaptor protein

 Score = 37.5 bits (87), Expect = 3e-04
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 200 AEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
           A++DF   + +QL  ++G  + VL  +     WW+G+I  RV +F + Y
Sbjct: 4   AQYDFSAEDPSQLSFRRGDIIEVL--DCPDPNWWRGRISGRVGFFPRNY 50

GRAP is a GRB-2 like adaptor protein that is highly expressed in lymphoid tissues. It acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. It has been identified as a regulator of TGFbeta signaling in diabetic kidney tubules and may have a role in the pathogenesis of the disease. GRAP contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domains (SH3c) of the related proteins, GRB2 and GRAP2, have been shown to bind to classical PxxP motif ligands, as well as to non-classical motifs. GRB2 SH3c binds Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, while the SH3c of GRAP2 binds to the phosphatase-like protein HD-PTP via a RxxxxK motif. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212705 cd11771, SH3_Pex13p_fungal, Src Homology 3 domain of fungal peroxisomal membrane protein Pex13p

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)

Query: 200 AEFDFCP-TEANQLPLKQGCQVIVLSK---EGEQKGWWKGKI-DERVSYF 244
           A +DF P     +L LK+G  V VLSK    G    WWKG+  D R+ +F
Sbjct: 4   ALYDFTPENPEMELSLKKGDIVAVLSKTDPLGRDSEWWKGRTRDGRIGWF 53

Pex13p, located in the peroxisomal membrane, contains two transmembrane regions and a C-terminal SH3 domain. It binds to the peroxisomal targeting type I (PTS1) receptor Pex5p and the docking factor Pex14p through its SH3 domain. It is essential for both PTS1 and PTS2 protein import pathways into the peroxisomal matrix. Pex13p binds Pex14p, which contains a PxxP motif, in a classical fashion to the proline-rich ligand binding site of its SH3 domain. It binds the WxxxF/Y motif of Pex5p in a novel site that does not compete with Pex14p binding. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 60

>gnl|CDD|198233 cd10370, SH2_Src_Src42, Src homology 2 (SH2) domain found in the Src oncogene at 42A (Src42)

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 15/105 (14%)

Query: 90  WFVGEMGREKATS--LLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           W+ G++ R +A    LL     G +L+R      +      Y+LS++  + VKH ++ + 
Sbjct: 5   WYFGKIKRIEAEKKLLLPENEHGAFLIR-----DSESRHNDYSLSVRDGDTVKHYRIRQL 59

Query: 148 EMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           +  G   +F+++   FR++ EL+  Y ++S      GL V L+ P
Sbjct: 60  DEGG---FFIARRTTFRTLQELVEHYSKDS-----DGLCVNLRKP 96

Src42 is a member of the Src non-receptor type tyrosine kinase family of proteins. The integration of receptor tyrosine kinase-induced RAS and Src42 signals by Connector eNhancer of KSR (CNK) as a two-component input is essential for RAF activation in Drosophila. Src42 is present in a wide variety of organisms including: California sea hare, pea aphid, yellow fever mosquito, honey bee, Panamanian leafcutter ant, and sea urchin. Src42 has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its C-terminal tail. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 96

>gnl|CDD|199831 cd10369, SH2_Src_Frk, Src homology 2 (SH2) domain found in the Fyn-related kinase (Frk)

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 15/105 (14%)

Query: 90  WFVGEMGREKATS--LLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           WF G + R  A    L      G +L+R      +   +  ++LS+     VKH ++   
Sbjct: 5   WFFGAIKRADAEKQLLYSENQTGAFLIR-----ESESQKGEFSLSVLDGGVVKHYRIRRL 59

Query: 148 EMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           +  G   +FL++ + F ++ E +  Y   S      GL V+L  P
Sbjct: 60  DEGG---FFLTRRKTFSTLNEFVNYYTTTS-----DGLCVKLGKP 96

Frk is a member of the Src non-receptor type tyrosine kinase family of proteins. The Frk subfamily is composed of Frk/Rak and Iyk/Bsk/Gst. It is expressed primarily epithelial cells. Frk is a nuclear protein and may function during G1 and S phase of the cell cycle and suppress growth. Unlike the other Src members it lacks a glycine at position 2 of SH4 which is important for addition of a myristic acid moiety that is involved in targeting Src PTKs to cellular membranes. FRK and SHB exert similar effects when overexpressed in rat phaeochromocytoma (PC12) and beta-cells, where both induce PC12 cell differentiation and beta-cell proliferation. Under conditions that cause beta-cell degeneration these proteins augment beta-cell apoptosis. The FRK-SHB responses involve FAK and insulin receptor substrates (IRS) -1 and -2. Frk has been demonstrated to interact with retinoblastoma protein. Frk regulates PTEN protein stability by phosphorylating PTEN, which in turn prevents PTEN degradation. Frk also plays a role in regulation of embryonal pancreatic beta cell formation. Frk has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Like the other members of the Src family the SH2 domain in addition to binding the target, also plays an autoinhibitory role by binding to its activation loop. The tryosine involved is at the same site as the tyrosine involved in the autophosphorylation of Src. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 96

>gnl|CDD|198271 cd10408, SH2_Nck1, Src homology 2 (SH2) domain found in Nck

 Score = 38.5 bits (89), Expect = 4e-04
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 11/87 (12%)

Query: 90  WFVGEMGREKA-TSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           W+ G++ R +A  +L ER  +G +L+R      + PN+  +++SLK   K KH KV  KE
Sbjct: 3   WYYGKVTRHQAEMALNERGNEGDFLIR---DSESSPND--FSVSLKAQGKNKHFKVQLKE 57

Query: 149 MDGVPQYFLSQSRYFRSIVELICCYER 175
                 Y + Q R F S+ EL+  Y++
Sbjct: 58  C----VYCIGQ-RKFSSMEELVEHYKK 79

Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 97

>gnl|CDD|212702 cd11768, SH3_Tec_like, Src Homology 3 domain of Tec-like Protein Tyrosine Kinases

 Score = 37.3 bits (87), Expect = 4e-04
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           I VA +DF P E   LPL++G + +VL    E   WW+ +
Sbjct: 1   IVVALYDFQPIEPGDLPLEKGEEYVVLDDSNEH--WWRAR 38

The Tec (Tyrosine kinase expressed in hepatocellular carcinoma) subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. They are cytoplasmic (or nonreceptor) tyr kinases containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212942 cd12009, SH3_Blk, Src homology 3 domain of Blk Protein Tyrosine Kinase

 Score = 35.9 bits (83), Expect = 0.001
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)

Query: 199 VAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           +A++DF P+    L LK+G ++ VL  +GE   WW  K
Sbjct: 3   IAQYDFVPSNERDLQLKKGEKLQVLKSDGE---WWLAK 37

Blk is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. It is expressed specifically in B-cells and is involved in pre-BCR (B-cell receptor) signaling. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212792 cd11858, SH3_Myosin-I_fungi, Src homology 3 domain of Type I fungal Myosins

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 200 AEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           A +DF  + AN+L LK+   V ++ KE    GWW  K
Sbjct: 4   ALYDFAGSVANELSLKKDDIVYIVQKEDN--GWWLAK 38

Type I myosins (myosin-I) are actin-dependent motors in endocytic actin structures and actin patches. They play roles in membrane traffic in endocytic and secretory pathways, cell motility, and mechanosensing. Saccharomyces cerevisiae has two myosins-I, Myo3 and Myo5, which are involved in endocytosis and the polarization of the actin cytoskeleton. Myosin-I contains an N-terminal actin-activated ATPase, a phospholipid-binding TH1 (tail homology 1) domain, and a C-terminal extension which includes an F-actin-binding TH2 domain, an SH3 domain, and an acidic peptide that participates in activating the Arp2/3complex. The SH3 domain of myosin-I is required for myosin-I-induced actin polymerization. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|198197 cd09944, SH2_Grb7_family, Src homology 2 (SH2) domain found in the growth factor receptor bound, subclass 7 (Grb7) proteins

 Score = 37.0 bits (86), Expect = 0.001
 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 7/65 (10%)

Query: 89  LWFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYE 146
            WF G + R++A  L+ ++   DG +L+R      +  N   + LSLK  +K+KH ++  
Sbjct: 6   PWFHGGISRDEAARLIRQQGLVDGVFLVR-----ESQSNPGAFVLSLKHGQKIKHYQIIP 60

Query: 147 KEMDG 151
            E +G
Sbjct: 61  IEDEG 65

The Grb family binds to the epidermal growth factor receptor (EGFR, erbB1) via their SH2 domains. There are 3 members of the Grb7 family of proteins: Grb7, Grb10, and Grb14. They are composed of an N-terminal Proline-rich domain, a Ras Associating-like (RA) domain, a Pleckstrin Homology (PH) domain, a phosphotyrosine interaction region (PIR, BPS) and a C-terminal SH2 domain. The SH2 domains of Grb7, Grb10 and Grb14 preferentially bind to a different RTK. Grb7 binds strongly to the erbB2 receptor, unlike Grb10 and Grb14 which bind weakly to it. Grb14 binds to Fibroblast Growth Factor Receptor (FGFR). Grb10 has been shown to interact with many different proteins, including the insulin and IGF1 receptors, platelet-derived growth factor (PDGF) receptor-beta, Ret, Kit, Raf1 and MEK1, and Nedd4. Grb7 family proteins are phosphorylated on serine/threonine as well as tyrosine residues. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|198180 cd09926, SH2_CRK_like, Src homology 2 domain found in cancer-related signaling adaptor protein CRK

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 10/74 (13%)

Query: 90  WFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEM 149
           W+ G M R++A  LL+ +  G +L+R      T P +  Y LS+  + +V H  +     
Sbjct: 9   WYFGPMSRQEAQELLQGQRHGVFLVR---DSSTIPGD--YVLSVSENSRVSHYII----- 58

Query: 150 DGVPQYFLSQSRYF 163
           + + Q   +QSRY 
Sbjct: 59  NSLGQPAPNQSRYR 72

SH2 domain in the CRK proteins. CRKI (SH2-SH3) and CRKII (SH2-SH3-SH3) are splicing isoforms of the oncoprotein CRK. CRKs regulate transcription and cytoskeletal reorganization for cell growth and motility by linking tyrosine kinases to small G proteins. The SH2 domain of CRK associates with tyrosine-phosphorylated receptors or components of focal adhesions, such as p130Cas and paxillin. CRK transmits signals to small G proteins through effectors that bind its SH3 domain, such as C3G, the guanine-nucleotide exchange factor (GEF) for Rap1 and R-Ras, and DOCK180, the GEF for Rac6. The binding of p130Cas to the CRK-C3G complex activates Rap1, leading to regulation of cell adhesion, and activates R-Ras, leading to JNK-mediated activation of cell proliferation, whereas the binding of CRK DOCK180 induces Rac1-mediated activation of cellular migration. The activity of the different splicing isoforms varies greatly with CRKI displaying substantial transforming activity, CRKII less so, and phosphorylated CRKII with no biological activity whatsoever. CRKII has a linker region with a phosphorylated Tyr and an additional C-terminal SH3 domain. The phosphorylated Tyr creates a binding site for its SH2 domain which disrupts the association between CRK and its SH2 target proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 106

>gnl|CDD|198277 cd10414, SH2_Grb14, Src homology 2 (SH2) domain found in the growth factor receptor bound, subclass 14 (Grb14) proteins

 Score = 37.2 bits (86), Expect = 0.002
 Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 8/90 (8%)

Query: 90  WFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           WF  ++ R++A  L+ ++   DG +L+R      +  N   + LS+   +K+KH ++   
Sbjct: 7   WFHHKISRDEAQRLIIQQGLVDGVFLVR-----DSQSNPRTFVLSMSHGQKIKHFQIIPV 61

Query: 148 EMDGVPQYFLSQSRY-FRSIVELICCYERN 176
           E DG   + L      F  +++L+  Y+ N
Sbjct: 62  EDDGELFHTLDDGHTRFTDLIQLVEFYQLN 91

The Grb family binds to the epidermal growth factor receptor (EGFR, erbB1) via their SH2 domains. Grb14 is part of the Grb7 family of proteins which also includes Grb7, and Grb14. They are composed of an N-terminal Proline-rich domain, a Ras Associating-like (RA) domain, a Pleckstrin Homology (PH) domain, a phosphotyrosine interaction region (PIR, BPS) and a C-terminal SH2 domain. The SH2 domains of Grb7, Grb10 and Grb14 preferentially bind to a different RTK. Grb14 binds to Fibroblast Growth Factor Receptor (FGFR) and weakly to the erbB2 receptor. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 108

>gnl|CDD|212838 cd11905, SH3_Tec, Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           I VA +DF PTE + L L+ G + ++L K      WWK +
Sbjct: 2   IVVAMYDFQPTEPHDLRLETGEEYVILEK--NDVHWWKAR 39

Tec is a cytoplasmic (or nonreceptor) tyr kinase containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. It also contains an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation, and the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. It is more widely-expressed than other Tec subfamily kinases. Tec is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Tec is a key component of T-cell receptor (TCR) signaling, and is important in TCR-stimulated proliferation, IL-2 production and phospholipase C-gamma1 activation. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|198218 cd10355, SH2_DAPP1_BAM32_like, Src homology 2 domain found in dual adaptor for phosphotyrosine and 3-phosphoinositides ( DAPP1)/B lymphocyte adaptor molecule of 32 kDa (Bam32)-like proteins

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 6/63 (9%)

Query: 83  ENLSEYLWFVGEMGREKA-TSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKH 141
           E L    W+ G + R  A   LL    DG+YLLR   +G       +++LS++  + VKH
Sbjct: 1   ELLQSLGWYHGNLTRHAAEALLLSNGVDGSYLLRNSNEGT-----GLFSLSVRAKDSVKH 55

Query: 142 MKV 144
             V
Sbjct: 56  FHV 58

DAPP1/Bam32 contains a putative myristoylation site at its N-terminus, followed by a SH2 domain, and a pleckstrin homology (PH) domain at its C-terminus. DAPP1 could potentially be recruited to the cell membrane by any of these domains. Its putative myristoylation site could facilitate the interaction of DAPP1 with the lipid bilayer. Its SH2 domain may also interact with phosphotyrosine residues on membrane-associated proteins such as activated tyrosine kinase receptors. And finally its PH domain exhibits a high-affinity interaction with the PtdIns(3,4,5)P(3) PtdIns(3,4)P(2) second messengers produced at the cell membrane following the activation of PI 3-kinases. DAPP1 is thought to interact with both tyrosine phosphorylated proteins and 3-phosphoinositides and therefore may play a role in regulating the location and/or activity of such proteins(s) in response to agonists that elevate PtdIns(3,4,5)P(3) and PtdIns(3,4)P(2). This protein is likely to play an important role in triggering signal transduction pathways that lie downstream from receptor tyrosine kinases and PI 3-kinase. It is likely that DAPP1 functions as an adaptor to recruit other proteins to the plasma membrane in response to extracellular signals. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. Length = 92

>gnl|CDD|212777 cd11843, SH3_PACSIN, Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons (PACSIN) proteins

 Score = 35.1 bits (81), Expect = 0.003
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 5/53 (9%)

Query: 200 AEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF 252
           A +D+   E+++L  K G  +  L +E EQ GW KG++D RV     LY  N+
Sbjct: 4   ALYDYEGQESDELSFKAGDILTKLEEEDEQ-GWCKGRLDGRVG----LYPANY 51

PACSINs, also called Synaptic dynamin-associated proteins (Syndapins), act as regulators of cytoskeletal and membrane dynamics. They bind both dynamin and Wiskott-Aldrich syndrome protein (WASP), and may provide direct links between the actin cytoskeletal machinery through WASP and dynamin-dependent endocytosis. Vetebrates harbor three isoforms with distinct expression patterns and specific functions. PACSINs contain an N-terminal F-BAR domain and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212919 cd11986, SH3_Stac3_1, First C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing protein 3 (Stac3)

 Score = 34.9 bits (80), Expect = 0.003
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 199 VAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           VA + F   E + L    G ++ V+    E+  WW+GKI E+  YF
Sbjct: 3   VALYRFKALEKDDLDFHPGERITVIDDSNEE--WWRGKIGEKTGYF 46

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac1 and Stac3 contain two SH3 domains while Stac2 contains a single SH3 domain at the C-terminus. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212881 cd11948, SH3_GRAP_N, N-terminal Src homology 3 domain of GRB2-related adaptor protein

 Score = 34.8 bits (80), Expect = 0.004
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
           AVA + F  TE+++LP ++G  + +L+ E +Q  W+K ++  R  Y  + Y
Sbjct: 2   AVALYSFQATESDELPFQKGDILKILNMEDDQ-NWYKAELQGREGYIPKNY 51

GRAP is a GRB-2 like adaptor protein that is highly expressed in lymphoid tissues. It acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. It has been identified as a regulator of TGFbeta signaling in diabetic kidney tubules and may have a role in the pathogenesis of the disease. GRAP contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The N-terminal SH3 domain of the related protein GRB2 binds to Sos and Sos-derived proline-rich peptides. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212799 cd11865, SH3_Nbp2-like, Src Homology 3 domain of Saccharomyces cerevisiae Nap1-binding protein 2 and similar fungal proteins

 Score = 34.4 bits (79), Expect = 0.004
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGW 232
           AVA +DF P   N+L   +G  + +L K G+  GW
Sbjct: 2   AVALYDFEPEHDNELGFAEGQILFILYKHGQ--GW 34

This subfamily includes Saccharomyces cerevisiae Nbp2 (Nucleosome assembly protein 1 (Nap1)-binding protein 2), Schizosaccharomyces pombe Skb5, and similar proteins. Nbp2 interacts with Nap1, which is essential for maintaining proper nucleosome structures in transcription and replication. It is also the binding partner of the yeast type II protein phosphatase Ptc1p and serves as a scaffolding protein that brings seven kinases in close contact to Ptc1p. Nbp2 plays a role many cell processes including organelle inheritance, mating hormone response, cell wall stress, mitotic cell growth at elevated temperatures, and high osmolarity. Skb5 interacts with the p21-activated kinase (PAK) homolog Shk1, which is critical for fission yeast cell viability. Skb5 activates Shk1 and plays a role in regulating cell morphology and growth under hypertonic conditions. Nbp2 and Skb5 contain an SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	272
KOG2996|consensus	865		100.0
KOG4278|consensus	1157		99.96
KOG1264|consensus	1267		99.95
KOG4792|consensus	293		99.94
KOG0197|consensus	468		99.94
KOG3601|consensus	222		99.92
smart00252	84	SH2 Src homology 2 domains. Src homology 2 domains	99.84
cd00173	94	SH2 Src homology 2 domains; Signal transduction, i	99.84
PF00017	77	SH2: SH2 domain; InterPro: IPR000980 The Src homol	99.82
KOG4637|consensus	464		99.8
KOG0194|consensus	474		99.75
KOG4226|consensus	379		99.69
KOG0790|consensus	600		99.61
KOG4637|consensus	464		99.56
KOG1264|consensus	1267		99.51
PF14604	49	SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3	99.49
PF07653	55	SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3	99.31
KOG2070|consensus	661		99.24
KOG2199|consensus	462		99.23
KOG1118|consensus	366		99.11
PF00018	48	SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Ho	99.1
KOG4348|consensus	627		99.02
smart00326	58	SH3 Src homology 3 domains. Src homology 3 (SH3) d	98.97
cd00174	54	SH3 Src homology 3 domains; SH3 domains bind to pr	98.96
KOG0790|consensus	600		98.96
KOG1930|consensus	483		98.96
KOG1029|consensus	1118		98.95
KOG2856|consensus	472		98.94
KOG4226|consensus	379		98.91
KOG0162|consensus	1106		98.83
KOG4225|consensus	489		98.8
KOG4348|consensus	627		98.77
KOG1029|consensus	1118		98.54
KOG3875|consensus	362		98.43
KOG4225|consensus	489		98.34
KOG1843|consensus	473		98.31
KOG3751|consensus	622		98.22
KOG3655|consensus	484		98.19
KOG2546|consensus	483		98.17
KOG3697|consensus	345		98.11
KOG0515|consensus	752		98.1
KOG1702|consensus	264		98.07
KOG2222|consensus	848		98.05
KOG3632|consensus	1335		97.84
PF14633	220	SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_	97.62
KOG3523|consensus	695		97.47
PF00130	53	C1_1: Phorbol esters/diacylglycerol binding domain	97.32
KOG4236|consensus	888		97.25
KOG4278|consensus	1157		97.16
KOG3632|consensus	1335		96.92
KOG4566|consensus	258		96.88
KOG0695|consensus	593		96.83
KOG4429|consensus	421		96.82
KOG4773|consensus	386		96.79
KOG4575|consensus	874		96.78
KOG3601|consensus	222		96.78
KOG3771|consensus	460		96.67
KOG4792|consensus	293		96.57
KOG2528|consensus	490		96.55
cd00029	50	C1 Protein kinase C conserved region 1 (C1) . Cyst	96.47
KOG1451|consensus	812		96.44
KOG3725|consensus	375		96.18
KOG3557|consensus	721		96.04
KOG0197|consensus	468		95.96
KOG0609|consensus	542		95.96
smart00109	49	C1 Protein kinase C conserved region 1 (C1) domain	95.82
KOG4236|consensus	888		95.57
KOG3775|consensus	482		94.7
KOG0696|consensus	683		92.92
KOG0192|consensus	362		92.84
KOG0196|consensus	996		91.66
KOG0199|consensus	1039		91.23
KOG1856|consensus	1299		91.18
KOG0615|consensus	475		90.96
PF08239	55	SH3_3: Bacterial SH3 domain; InterPro: IPR013247 S	90.69
KOG0040|consensus	2399		90.61
PF14633	220	SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_	89.11
KOG0585|consensus	576		86.78
KOG0199|consensus	1039		86.3
KOG0694|consensus	694		86.27
KOG1090|consensus	1732		85.77
PF03107	30	C1_2: C1 domain; InterPro: IPR004146 This short do	85.59
KOG0600|consensus	560		84.71
smart00287	63	SH3b Bacterial SH3 domain homologues.	84.43
KOG0663|consensus	419		83.78
KOG1856|consensus	1299		83.61
KOG0658|consensus	364		83.57
KOG1095|consensus	1025		82.34
PF13831	36	PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A.	81.98
KOG3565|consensus	640		80.8
KOG4257|consensus	974		80.35
KOG3705|consensus	580		80.1
KOG1011|consensus	1283		80.1

>KOG2996|consensus

Probab=100.00  E-value=1.7e-55  Score=408.93  Aligned_cols=234  Identities=31%  Similarity=0.581  Sum_probs=207.7

Q ss_pred             hheehhcccCCCceecCcCCcchhcccccCCCCCCCC--------------------------CCCCCCC--------CC
Q psy3210          11 ISIVTLKSRGLRPLCSQACYLACHKQCIPHTGRCGTG--------------------------VPLPAMS--------PR   56 (272)
Q Consensus        11 ~~~~~~~g~~~qg~~c~~c~~~~h~~c~~~~~~C~~~--------------------------~~~p~~~--------pp   56 (272)
                      .-.|||||+|||||.|.+||+.+||+|+++++.|++.                          +|+|+|.        ||
T Consensus       539 vC~mllrGtfYQGY~C~~c~~~ahkecl~~vp~cgr~~q~~~Gt~k~~~k~~~~~r~t~~rn~~GLpkm~~vq~ysg~p~  618 (865)
T KOG2996|consen  539 VCQMLLRGTFYQGYKCEKCGADAHKECLGRVPPCGRYLQFAKGTRKEVIKMTGHNRFTNKRNRPGLPKMDVVQNYSGIPP  618 (865)
T ss_pred             HHHHHhhhhhhcceeeeeccccHHHHhccCCCCcccccccCCcchhhhhhhcCccccccccCCCCCcchhhhhccCCCCC
Confidence            3579999999999999999999999999999999543                          4678885        55


Q ss_pred             CC-----cccccCCCCC------------------CCCcceeecCccC------------cCCcccccEeeeeCCHHHHH
Q psy3210          57 PP-----LMDIAGAAQP------------------LGGNEWTAKSWAD------------HENLSEYLWFVGEMGREKAT  101 (272)
Q Consensus        57 pp-----~~~~~~~~~~------------------~~~~g~~P~~~~~------------~~~l~~~~Wf~g~isR~~Ae  101 (272)
                      ||     ++.++.||.+                  .+..||+|++..+            +.+++.++||.|.|.|.+||
T Consensus       619 Pag~igP~l~~~~gdvlel~~~d~~s~~w~gr~~~sr~sg~fpss~vkp~~~vpr~~~~~~~d~s~~~WyaG~MERaqae  698 (865)
T KOG2996|consen  619 PAGSIGPRLVLQEGDVLELLKGDAESSWWEGRNHGSRESGNFPSSTVKPCPSVPRQQDYVPTDYSEFPWYAGEMERAQAE  698 (865)
T ss_pred             CCccCCCceEecCCceeehhcCCCCCcccccCCccCCccCCCCccccCcCCCCCCCCCCCccchhhhhhhcchHhhhhhh
Confidence            54     6778888833                  1337888888522            56788899999999999999


Q ss_pred             HhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccchhhhhhhhhhccccccc
Q psy3210         102 SLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIEN  181 (272)
Q Consensus       102 ~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~  181 (272)
                      ..|+++++|+||||.+...     ...|+||++++..|+|++|.+.+ |   +|+|.+.+.|.|+.|||+||+.|+|.+.
T Consensus       699 s~Lk~~~ngT~LVR~r~ke-----a~e~AISikynnevKHikI~~~d-g---~~~i~E~k~F~sl~ELVeyYq~~sLke~  769 (865)
T KOG2996|consen  699 STLKNRPNGTYLVRYRTKE-----AKEFAISIKYNNEVKHIKIETND-G---KVHITEDKKFNSLVELVEYYQSHSLKEI  769 (865)
T ss_pred             hHhhcCCCceEEEEecccc-----hhheeEEEEeccccceEEEEecC-C---eEEechhhhhhhHHHHHHHHHhccHHHH
Confidence            9999999999999999754     58999999999999999999985 4   9999999999999999999999999999


Q ss_pred             ccccccccccccee----------------------eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCC
Q psy3210         182 FIGLNVRLQLPFRQ----------------------IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDE  239 (272)
Q Consensus       182 ~~~l~~~L~~P~~~----------------------~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g  239 (272)
                      |..|+++|+.|++.                      ..|+|.|||.+.+..||||++||+|.++++.|++.|||+|+++|
T Consensus       770 Fk~LDTtLk~Pyke~e~sa~~~~~~~~~sv~s~~~~g~AvarYdf~ard~~eLSlk~GDvV~i~~k~g~d~GWWkGevng  849 (865)
T KOG2996|consen  770 FKALDTTLKFPYKEPEHSAGQRGNRAGNSVLSPKVVGTAVARYDFCARDMRELSLKEGDVVKIYDKVGEDQGWWKGEVNG  849 (865)
T ss_pred             HHHhhhhhcCCCcChhhhhhhccccccccccCcceeeeeeeccccCCCchhhcccccCCEEEEehhccccCceecceecC
Confidence            99999999999962                      25789999999999999999999999999999989999999999


Q ss_pred             eeeeeeccchhhhh
Q psy3210         240 RVSYFFQLYWGNFR  253 (272)
Q Consensus       240 ~~G~fP~~yVeE~~  253 (272)
                      ++||||++||+|-.
T Consensus       850 rvGwFPstYVee~~  863 (865)
T KOG2996|consen  850 RVGWFPSTYVEEDD  863 (865)
T ss_pred             cccccccccccccC
Confidence            99999999999854

>KOG4278|consensus

Probab=99.96  E-value=8e-30  Score=241.30  Aligned_cols=183  Identities=18%  Similarity=0.339  Sum_probs=146.9

Q ss_pred             CcceeecCcc-CcCCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecC
Q psy3210          71 GNEWTAKSWA-DHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEM  149 (272)
Q Consensus        71 ~~g~~P~~~~-~~~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~  149 (272)
                      ++||||+||+ ...+|+.+.||||.++|..||.+|...-.|+||||+|++.     ++.|+||++++++|+||+|....+
T Consensus       134 GqGWVPSNyItPvNSLeKhsWYHGpvSRsaaEy~LsSgInGSFLVRESEsS-----pgQ~sISlRyeGRVyHYRINt~~d  208 (1157)
T KOG4278|consen  134 GQGWVPSNYITPVNSLEKHSWYHGPVSRSAAEYILSSGINGSFLVRESESS-----PGQYSISLRYEGRVYHYRINTDND  208 (1157)
T ss_pred             CCccccccccccccchhhcccccCccccchhhhhhhcCcccceEEeeccCC-----CcceeEEEEecceEEEEEeeccCC
Confidence            4799999994 4679999999999999999999999888899999999855     599999999999999999999888


Q ss_pred             CCcceEEeecccccchhhhhhhhhhccccccccccccccccccceeeeeeeeccCCCCCCCCCccCCCcEEEE----eee
Q psy3210         150 DGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIV----LSK  225 (272)
Q Consensus       150 g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~~~~~alydf~~~~~~ELsl~~Gd~i~v----~~k  225 (272)
                      |   +.|+.....|.+|.|||.||++.+     ++|-+.|.+|..+.--..+|.-.+.. |++.+.+-||+.-    -++
T Consensus       209 g---K~yvt~EsrF~TLaELVHHHStvA-----DGLittLhYPApK~nKptvygvSPn~-DkWEmeRtdItMkhKLGGGQ  279 (1157)
T KOG4278|consen  209 G---KMYVTQESRFRTLAELVHHHSTVA-----DGLITTLHYPAPKKNKPTVYGVSPNA-DKWEMERTDITMKHKLGGGQ  279 (1157)
T ss_pred             c---cEEEeehhhhhHHHHHHhhccccc-----cceeEeeeccCccCCCCceeeecCCc-chhhccchheeeeeccCCCc
Confidence            7   777777778999999999999998     99999999999643222244333322 4444444444311    235


Q ss_pred             eCCc-CCeEEEEeC-------CeeeeeeccchhhhhhhccCCCCCcccce
Q psy3210         226 EGEQ-KGWWKGKID-------ERVSYFFQLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       226 ~ge~-~gwW~G~~~-------g~~G~fP~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .||+ .|.|+...-       +...|--.+|++||.+||.+.|||||||.
T Consensus       280 YGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLL  329 (1157)
T KOG4278|consen  280 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL  329 (1157)
T ss_pred             ccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHh
Confidence            5655 888986432       46677778999999999999999999996

>KOG1264|consensus

Probab=99.95  E-value=6.1e-28  Score=231.97  Aligned_cols=157  Identities=28%  Similarity=0.573  Sum_probs=131.2

Q ss_pred             cCcCCcccccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEee
Q psy3210          80 ADHENLSEYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLS  158 (272)
Q Consensus        80 ~~~~~l~~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~  158 (272)
                      +.+..+++++|||...+|++||++|.. ..||+||||.++      ..+.|+||++.+++|+|++|.++..    .|.++
T Consensus       640 Pqp~~He~k~W~~as~treqAE~mL~rvp~DGaFLiR~~~------~~nsy~iSfr~~gkikHcRi~rdGr----~fvl~  709 (1267)
T KOG1264|consen  640 PQPNPHESKPWYHASLTREQAEDMLMRVPRDGAFLIRKRE------GSNSYAISFRARGKIKHCRINRDGR----HFVLG  709 (1267)
T ss_pred             CCCCcccCCccccccccHHHHHHHHhhCccCcceEEEecc------CCceEEEEEEEcCcEeEEEEccCce----EEEec
Confidence            345788999999999999999999976 567999999653      3589999999999999999988643    56666


Q ss_pred             cccccchhhhhhhhhhccccccccccccccccccc----------------------------------eeeeeeeeccC
Q psy3210         159 QSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF----------------------------------RQIIAVAEFDF  204 (272)
Q Consensus       159 ~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~----------------------------------~~~~~~alydf  204 (272)
                      .. .|+||++||+||.+++|.+...     |.+|+                                  ++..++|+|||
T Consensus       710 t~-~FesLv~lv~yY~k~~lyR~mk-----Lr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Y  783 (1267)
T KOG1264|consen  710 TS-AFESLVELVSYYEKHPLYRKMK-----LRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMPQVTVKALYDY  783 (1267)
T ss_pred             cH-HHHHHHHHHHHHhcChhhhccc-----ccCcCCHHHHHHhhhhcccccccccccCCCCccccCccccchhhhhhhcc
Confidence            55 5999999999999999875432     22222                                  12468899999


Q ss_pred             CCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCe-eeeeeccchhhhhh
Q psy3210         205 CPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDER-VSYFFQLYWGNFRL  254 (272)
Q Consensus       205 ~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~-~G~fP~~yVeE~~~  254 (272)
                      .+...|||+|.+|.+|+++.+..  .|||+|++.|+ .+|||+|||+|+-.
T Consensus       784 ka~r~DELSFpk~aiItnv~kee--g~wWrGdYGg~iq~wfPsnyVeei~~  832 (1267)
T KOG1264|consen  784 KAKRSDELSFPKGAIITNVSKEE--GGWWRGDYGGRIQQWFPSNYVEEIST  832 (1267)
T ss_pred             ccCCcccccccccceeEeeeccC--CceeecccccceeeeccHHHhhhhcc
Confidence            99999999999999999998776  68999999975 58999999998754

>KOG4792|consensus

Probab=99.94  E-value=4e-27  Score=198.03  Aligned_cols=156  Identities=22%  Similarity=0.405  Sum_probs=129.3

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCC-c---ceEEee
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDG-V---PQYFLS  158 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~-~---~~~~i~  158 (272)
                      +..+...||+|.|+|+||..+|.+...|+||||+|...     +|.|+|||+++.+|.||.|.+..-.. +   ..|.|+
T Consensus         6 D~~er~swYfg~mSRqeA~~lL~~~r~G~FLvRDSst~-----pGdYvLsV~E~srVshYiIn~~~p~~~~~~~~~~rIg   80 (293)
T KOG4792|consen    6 DSSERSSWYFGPMSRQEAVALLQGQRHGVFLVRDSSTS-----PGDYVLSVSENSRVSHYIINSSPPSPAQPPPSRLRIG   80 (293)
T ss_pred             ChhhccceecCcccHHHHHHHhcCcceeeEEEecCCCC-----CCceEEEEecCcceeeeeecCCCCCccCCCcceeeec
Confidence            34455689999999999999999988999999999754     69999999999999999998732210 1   158998


Q ss_pred             cccccchhhhhhhhhhccccccccccccccccccce--------------eeeeeeeccCCCCCCCCCccCCCcEEEEee
Q psy3210         159 QSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR--------------QIIAVAEFDFCPTEANQLPLKQGCQVIVLS  224 (272)
Q Consensus       159 ~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~--------------~~~~~alydf~~~~~~ELsl~~Gd~i~v~~  224 (272)
                      +.. |++|+.|++||+.+-|.      .++|..|++              ...++|+|||.+.+.++|.|++||+++|+.
T Consensus        81 dQ~-Fd~lPaLL~fykihyLd------tttLi~p~~r~~~~~~~~~~~~~~~~vr~~fdF~G~deeDLPFkkGeiL~I~~  153 (293)
T KOG4792|consen   81 DQE-FDSLPALLEFYKIHYLD------TTTLIEPAKRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGEILRIRD  153 (293)
T ss_pred             ccc-ccchHHHHhheeEeeec------cccccccccccccccCcccchhhhhheeeeeccCCCccccCCcccCcEEEEec
Confidence            885 99999999999987652      344555543              235778999999999999999999999999


Q ss_pred             eeCCcCCeEEEEeC-Ceeeeeeccchhhh
Q psy3210         225 KEGEQKGWWKGKID-ERVSYFFQLYWGNF  252 (272)
Q Consensus       225 k~ge~~gwW~G~~~-g~~G~fP~~yVeE~  252 (272)
                      |..  +.||..+.. |++|++|.+||+..
T Consensus       154 K~e--eqWW~Arns~Gk~GmIPvpYVe~~  180 (293)
T KOG4792|consen  154 KPE--EQWWNARNSEGKRGMIPVPYVEKY  180 (293)
T ss_pred             CcH--HHhhhhhccCCcccceechHHHhh
Confidence            887  459999875 99999999999954

>KOG0197|consensus

Probab=99.94  E-value=2.5e-27  Score=221.45  Aligned_cols=183  Identities=23%  Similarity=0.381  Sum_probs=147.5

Q ss_pred             CCCcceeecCccCc-------CCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCC--
Q psy3210          69 LGGNEWTAKSWADH-------ENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDE--  137 (272)
Q Consensus        69 ~~~~g~~P~~~~~~-------~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~--  137 (272)
                      ++.+|++|+|+...       .+++.++||+|.|+|++||+.|..  ...|+||||+|++     .++.|+||++...  
T Consensus        55 ~~~~g~ip~N~v~~~~~~~~~~~l~~~~Wf~~~isR~~ae~~ll~p~~~~G~flvR~se~-----~~g~yslsv~~~~~~  129 (468)
T KOG0197|consen   55 LGQEGYIPSNYVARNRGSPAFIKLSDEPWFFGKISREEAERQLLAPENKEGAFLVRESES-----DKGDYSLSVREGDSG  129 (468)
T ss_pred             cCCCCcCcCceeeccccCCCccccccCCchhccccHHHHHHhhcCCCCCccceeeecccC-----CcCCeeEEEEecccc
Confidence            35689999999443       789999999999999999987755  4569999999974     4799999999965  


Q ss_pred             ----eeeEEEEEEecCCCcceEE--eecccccchhhhhhhhhhccccccccccccccccccceee----eeee-e-ccCC
Q psy3210         138 ----KVKHMKVYEKEMDGVPQYF--LSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI----IAVA-E-FDFC  205 (272)
Q Consensus       138 ----~v~H~~I~~~~~g~~~~~~--i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~~----~~~a-l-ydf~  205 (272)
                          .|+||+|...+++   .++  +.....|++|.+||+||+.++     +++++.|..|+...    ...+ + +|-+
T Consensus       130 ~~~~~v~hyri~~~~~~---~~~~~~~~~~~F~~l~~lv~~~~~~~-----~gl~~~l~~p~~~~~~~~p~~~~~~~d~w  201 (468)
T KOG0197|consen  130 GLGAKVKHYRIRQLDGG---GLYPYIDERELFSSLQQLVNYYSKNA-----DGLCTRLRDPCSKQGHTKPQTPDLARDPW  201 (468)
T ss_pred             CCccceeeeeeeEcCCC---CeecCCCHHHhhhhHHHHHhhhhccC-----cchhhcccCchhccCCCCCCCCccccCCe
Confidence                8999999998876   455  888889999999999999999     79999999998531    2222 1 4445


Q ss_pred             CCCCCCCccCCCcEEEEeeeeCCc-CCeEEEEeC------CeeeeeeccchhhhhhhccCCCCCcccce
Q psy3210         206 PTEANQLPLKQGCQVIVLSKEGEQ-KGWWKGKID------ERVSYFFQLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       206 ~~~~~ELsl~~Gd~i~v~~k~ge~-~gwW~G~~~------g~~G~fP~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      ..++++|.|.+ ++  +.+.||++ .|+|+|...      ....+.|..|++||++||+|+|+|||||.
T Consensus       202 ei~r~~l~l~~-~L--G~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~  267 (468)
T KOG0197|consen  202 EIPREELKLIR-EL--GSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLY  267 (468)
T ss_pred             eecHHHHHHHH-Hh--cCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEE
Confidence            55678888764 22  45678876 888988854      13357789999999999999999999985

>KOG3601|consensus

Probab=99.92  E-value=6.1e-26  Score=189.47  Aligned_cols=172  Identities=26%  Similarity=0.367  Sum_probs=148.5

Q ss_pred             CCCcceeecCccCcCCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEec
Q psy3210          69 LGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE  148 (272)
Q Consensus        69 ~~~~g~~P~~~~~~~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~  148 (272)
                      .+.+|++|+|+   .....+.||+|.++|..||++|....+|+||+|.++..     ++.|++|++....|.|+++.+..
T Consensus        42 ~g~~g~~P~Na---i~~~~~~wve~~i~r~~ae~~l~~~~~G~fl~r~s~sS-----Pg~fsgsvr~~d~vqhfkvvrpa  113 (222)
T KOG3601|consen   42 DGPEGFIPKNA---IRMKPHEWVEGLIPRPLAEDLLSKKRDGDFLIRLSESS-----PGDFSGSVRFPDGVQHFKVVRPA  113 (222)
T ss_pred             cCccccCcccc---cccccccceecccccchhhhhhhccCcchhhhhhhhcC-----cccccccccCCCCceeccccccC
Confidence            57799999999   66677899999999999999998899999999999865     59999999999999999999887


Q ss_pred             CCCcceEEeecccccchhhhhhhhhhcccccccccccc-------ccccccceeeeeeeeccCCCCCCCCCccCCCcEEE
Q psy3210         149 MDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLN-------VRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVI  221 (272)
Q Consensus       149 ~g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~-------~~L~~P~~~~~~~alydf~~~~~~ELsl~~Gd~i~  221 (272)
                      .+   +|+++..+ |.++.+|++||.+++...+.+...       .++..|.....+.|+|||.+.++.|+.|++||+|+
T Consensus       114 ~~---k~~lw~sk-fnslnplv~Y~rt~s~~r~~qi~l~d~~~~~~~~~~~~~~~yqQa~~df~~~pp~ql~f~~gq~~~  189 (222)
T KOG3601|consen  114 FG---KYFLWSSK-FNSLNPLVSYHRTASQSRNQQIFLRDMEPPPAPLPPAPTNYYQQALYDFQPQPPGQLAFRRGQQIQ  189 (222)
T ss_pred             cc---ccccchhh-ccCCCCCcccCcccccccceeeeecccccccccCCCCccchhhhhcCCCCCCCchhhccccCCcce
Confidence            76   89998765 999999999999988765433221       22344455677899999999999999999999999


Q ss_pred             EeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         222 VLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       222 v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      |+++.+  .-||.|...|+.|+||++||..+.+
T Consensus       190 v~~~ss--~~ww~Gs~lg~agiFpagyv~p~d~  220 (222)
T KOG3601|consen  190 VLDSSS--PFWWFGSKLGRAGIFPAGYVAPSDL  220 (222)
T ss_pred             eecCCC--cchhhccccCceeeecCcccccccc
Confidence            998877  6799999999999999999986543

>smart00252 SH2 Src homology 2 domains

Probab=99.84  E-value=8.3e-21  Score=140.20  Aligned_cols=83  Identities=37%  Similarity=0.650  Sum_probs=75.1

Q ss_pred             ccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccchhh
Q psy3210          88 YLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIV  167 (272)
Q Consensus        88 ~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~sL~  167 (272)
                      ++||||.|+|++||++|.+.++|+||||.|++.     ++.|+||++.++.++|++|...+++   .|++.....|+||.
T Consensus         1 ~~w~~g~i~r~~Ae~lL~~~~~G~FLvR~s~~~-----~~~~~Lsv~~~~~~~h~~I~~~~~~---~~~l~~~~~F~sl~   72 (84)
T smart00252        1 QPWYHGFISREEAEKLLKNEGDGDFLVRDSESE-----PGDYVLSVRVKGKVKHYRIRRNEDG---KFYLDGGRKFPSLV   72 (84)
T ss_pred             CCeecccCCHHHHHHHHhcCCCcEEEEEcCCCC-----CCCEEEEEEECCEEEEEEEEECCCC---cEEECCCCccCCHH
Confidence            489999999999999999888999999999743     5899999999999999999988755   79998877899999


Q ss_pred             hhhhhhhcccc
Q psy3210         168 ELICCYERNSL  178 (272)
Q Consensus       168 eLV~~y~~~~L  178 (272)
                      |||+||+.+++
T Consensus        73 eLI~~y~~~~~   83 (84)
T smart00252       73 ELVEHYQKNSL   83 (84)
T ss_pred             HHHHHHhhCCC
Confidence            99999998874

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.

>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr)

Probab=99.84  E-value=1.2e-20  Score=141.82  Aligned_cols=94  Identities=37%  Similarity=0.658  Sum_probs=79.9

Q ss_pred             cEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccchhhh
Q psy3210          89 LWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVE  168 (272)
Q Consensus        89 ~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~sL~e  168 (272)
                      +||||.|+|++||++|...++|+||||.|++     .++.|+||++.+++++|++|...+++   .+.......|+||.|
T Consensus         1 ~w~~g~i~r~~Ae~~L~~~~~G~FLiR~s~~-----~~~~~~Lsv~~~~~v~H~~I~~~~~~---~~~~~~~~~f~sl~e   72 (94)
T cd00173           1 PWYHGPISREEAEELLKKKPDGTFLVRDSES-----SPGDYVLSVRVKGKVKHYRIERTDDG---YYLLGEGRSFPSLPE   72 (94)
T ss_pred             CccccCCCHHHHHHHHhcCCCceEEEEecCC-----CCCCEEEEEEECCEEEEEEEEECCCC---eEEecCCCccCCHHH
Confidence            6999999999999999988999999999974     35899999999999999999998775   444443668999999


Q ss_pred             hhhhhhccccccccccccccccccc
Q psy3210         169 LICCYERNSLIENFIGLNVRLQLPF  193 (272)
Q Consensus       169 LV~~y~~~~L~~~~~~l~~~L~~P~  193 (272)
                      ||+||+.+++   ...+...|..|+
T Consensus        73 Lv~~y~~~~~---~~~~~~~L~~p~   94 (94)
T cd00173          73 LIEHYQKNPL---SDGLGVKLRYPV   94 (94)
T ss_pred             HHHHHhhCcc---CCCcccEeCCcC
Confidence            9999999986   245667777664

SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.

>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []

Probab=99.82  E-value=4.5e-20  Score=134.10  Aligned_cols=76  Identities=38%  Similarity=0.681  Sum_probs=70.6

Q ss_pred             EeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccchhhh
Q psy3210          90 WFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVE  168 (272)
Q Consensus        90 Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~sL~e  168 (272)
                      ||||.|+|++||++|.. .++|+||||.|.+.     ++.|+||++.+++|+|++|...+++   .|++.+...|+||.+
T Consensus         1 W~~g~isr~~Ae~~L~~~~~~G~FLvR~s~~~-----~~~~~Lsv~~~~~v~h~~I~~~~~~---~~~~~~~~~F~sl~~   72 (77)
T PF00017_consen    1 WFHGFISRQEAERLLMQGKPDGTFLVRPSSSK-----PGKYVLSVRFDGKVKHFRINRTENG---GYFLSDGKKFPSLSD   72 (77)
T ss_dssp             TBEESSHHHHHHHHHHTTSSTTEEEEEEESSS-----TTSEEEEEEETTEEEEEEEEEETTS---EEESSTSSEBSSHHH
T ss_pred             CcCCCCCHHHHHHHHHhcCCCCeEEEEecccc-----ccccccccccccccEEEEEEecCCc---eEEccCCCcCCCHHH
Confidence            99999999999999998 89999999999743     5889999999999999999999886   789988888999999


Q ss_pred             hhhhh
Q psy3210         169 LICCY  173 (272)
Q Consensus       169 LV~~y  173 (272)
                      ||+||
T Consensus        73 LV~~y   77 (77)
T PF00017_consen   73 LVEHY   77 (77)
T ss_dssp             HHHHH
T ss_pred             HHHhC
Confidence            99998

Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....

>KOG4637|consensus

Probab=99.80  E-value=9.8e-20  Score=162.94  Aligned_cols=103  Identities=30%  Similarity=0.519  Sum_probs=96.0

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      .+|...+||||.|+|+++.+.|.+.+||+||||+-.     +.+|.|+|+++.++.++-++|...++    +|-+.+.-+
T Consensus        18 ~~L~~a~WYWgdisReev~~~L~d~PDGsFlVRdAs-----tm~GdYTLtl~k~g~~KLikI~h~Dg----KyGF~d~lt   88 (464)
T KOG4637|consen   18 DELQDAEWYWGDISREEVNKKLRDQPDGSFLVRDAS-----TMQGDYTLTLRKGGNNKLIKIVHRDG----KYGFSDPLT   88 (464)
T ss_pred             hhhhhccccccccCHHHHHHHhcCCCCCcEEeeccc-----cCCCceEEEEecCCccceeeeEEecC----ccCCCCchh
Confidence            458999999999999999999999999999999885     45799999999999999999999876    788888889


Q ss_pred             cchhhhhhhhhhccccccccccccccccccce
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      |.|+++||+||+..+|+..++.|+.+|.+|+.
T Consensus        89 f~SVVelIn~yr~~SL~~yN~~LDvrLlyPVs  120 (464)
T KOG4637|consen   89 FNSVVELINHYRNESLAQYNPKLDVRLLYPVS  120 (464)
T ss_pred             hHHHHHHHHHHhhhHHHhhCcccceeeechHH
Confidence            99999999999999999999999999999995

>KOG0194|consensus

Probab=99.75  E-value=4e-18  Score=161.47  Aligned_cols=162  Identities=24%  Similarity=0.333  Sum_probs=113.4

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCce-EEEEeeC--CeeeEEEEEEecCCCcceEEeec
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIY-ALSLKTD--EKVKHMKVYEKEMDGVPQYFLSQ  159 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y-~LSv~~~--~~v~H~~I~~~~~g~~~~~~i~~  159 (272)
                      ..+..++||||.+.|++|+.+|.+  +|+||||.++..+  .....+ .||++..  ..++||.|.+.++    +++...
T Consensus        44 ~~~~~~~~yHG~l~red~~~lL~~--~GDfLvR~s~~~~--~~~~~~~vlSv~~~~~~~~~h~vi~~~~~----~~~~~~  115 (474)
T KOG0194|consen   44 KDLRELPYYHGLLPREDAEKLLKN--DGDFLVRASEPKE--GEKREFVVLSVKWSVFKKIKHYVIKRNGN----LFFFEG  115 (474)
T ss_pred             hHhhcCccccccccHhHHHHHhCC--CCceEEEeecccC--CcceeEEEEEEEeecCCceeEEEEEEcCC----eeEEec
Confidence            455668999999999999999987  6999999998652  223334 9999985  7899999998766    677777


Q ss_pred             ccccchhhhhhhhhhccccccccccccccccccceeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCC
Q psy3210         160 SRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDE  239 (272)
Q Consensus       160 ~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g  239 (272)
                      ...|+++.+||.||+.+.+....  ....|..|+.+..       |...++++.+.+   ...-+.||+   .|.|+..-
T Consensus       116 ~~~F~si~~li~~~~~~~~~~~~--~~~~L~~PI~r~~-------Wel~H~~v~l~k---kLGeGaFGe---V~~G~l~~  180 (474)
T KOG0194|consen  116 LRKFPTISELVNYYKFSKLEITG--KNFFLKRPIPRQK-------WELSHSDIELGK---KLGEGAFGE---VFKGKLKL  180 (474)
T ss_pred             cccCCcHHHHHHHHHhcccceec--cceeecccccccc-------cEEeccCccccc---eeecccccE---EEEEEEEe
Confidence            77899999999999988854332  2335777775421       222345544431   112234443   56665531


Q ss_pred             ee-------------e---e---eeccchhhhhhhccCCCCCcccce
Q psy3210         240 RV-------------S---Y---FFQLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       240 ~~-------------G---~---fP~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      +.             |   .   --.+|+.||++|++|+|+|||||-
T Consensus       181 ~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~y  227 (474)
T KOG0194|consen  181 KNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFY  227 (474)
T ss_pred             cCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            11             1   0   013689999999999999999983

>KOG4226|consensus

Probab=99.69  E-value=1e-16  Score=138.77  Aligned_cols=88  Identities=25%  Similarity=0.469  Sum_probs=77.2

Q ss_pred             cccccEeeeeCCHHHHHHhcc-cCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeeccccc
Q psy3210          85 LSEYLWFVGEMGREKATSLLE-READGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYF  163 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~-~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F  163 (272)
                      +...+||+|+|+|.+||.+|. ...+|+||||+|++     +++.|++|++..++-+||+|...++    .|.|+.. .|
T Consensus       278 ~ag~~WYyG~itR~qae~~Ln~hG~eGdFLiRDSEs-----npgD~SvSlka~grNKHFkVq~~d~----~ycIGqR-kF  347 (379)
T KOG4226|consen  278 FAGRPWYYGNITRHQAECALNEHGHEGDFLIRDSES-----NPGDFSVSLKASGRNKHFKVQLVDN----VYCIGQR-KF  347 (379)
T ss_pred             ccCCcceeccccHHHHHHHHhccCccCceEEecCCC-----CCcceeEEeeccCCCcceEEEEecc----eEEeccc-ee
Confidence            566799999999999999995 45789999999975     4699999999999999999988766    7999876 49


Q ss_pred             chhhhhhhhhhcccccccc
Q psy3210         164 RSIVELICCYERNSLIENF  182 (272)
Q Consensus       164 ~sL~eLV~~y~~~~L~~~~  182 (272)
                      .++.+||+||++.++..+-
T Consensus       348 ~tmd~Lv~HY~kaPIfts~  366 (379)
T KOG4226|consen  348 HTMDELVEHYKKAPIFTSE  366 (379)
T ss_pred             ccHHHHHHhhhcCCceecC
Confidence            9999999999999875443

>KOG0790|consensus

Probab=99.61  E-value=7.9e-16  Score=141.18  Aligned_cols=106  Identities=28%  Similarity=0.522  Sum_probs=88.6

Q ss_pred             ecCccCcCCcccccEeeeeCCHHHHHHhcc-cCCCceEEEEeCCCCCCCCCCCceEEEEeeCC---------eeeEEEEE
Q psy3210          76 AKSWADHENLSEYLWFVGEMGREKATSLLE-READGTYLLRIRPQGPTHPNETIYALSLKTDE---------KVKHMKVY  145 (272)
Q Consensus        76 P~~~~~~~~l~~~~Wf~g~isR~~Ae~lL~-~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~---------~v~H~~I~  145 (272)
                      |-++|+   ...+.||||+++-.+||.||. ...+|+||||+|.+.     +|.|+||++.+.         +|.|+.|.
T Consensus       101 pl~cAd---ptserWfHG~LsgkeAekLl~ekgk~gsfLvReSqs~-----PGdfVlSvrTdd~~~~~~~~~kVtHvmI~  172 (600)
T KOG0790|consen  101 PLNCAD---PTSERWFHGHLSGKEAEKLLQEKGKHGSFLVRESQSH-----PGDFVLSVRTDDKKESNDSKLKVTHVMIR  172 (600)
T ss_pred             CCccCC---chhhhhhccCCCchhHHHHHHhcCCCccEEEeccccC-----CCceEEEEEcCCcccCCCCccceEEEEEE
Confidence            667743   456779999999999999994 457899999999854     699999999975         89999999


Q ss_pred             EecCCCcceEEeecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         146 EKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       146 ~~~~g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      ..+.    +|-+++...|.||.+||+||+++++.|.. +--..|.+|+.
T Consensus       173 ~q~~----kydVGgge~F~sltdLidhykknpmvEt~-gtvv~LrqP~n  216 (600)
T KOG0790|consen  173 CQEG----KYDVGGGERFDSLTDLVEHYKKNPMVETL-GTVVYLRQPLN  216 (600)
T ss_pred             eccc----ccccCCccccchHHHHHHHhccCchhhhc-ceeEEeecccc
Confidence            9764    89999999999999999999999987652 33456677764

>KOG4637|consensus

Probab=99.56  E-value=2.9e-15  Score=134.44  Aligned_cols=97  Identities=31%  Similarity=0.497  Sum_probs=87.0

Q ss_pred             ccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccchhh
Q psy3210          88 YLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIV  167 (272)
Q Consensus        88 ~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~sL~  167 (272)
                      ..|+.+.+.|..||++|+..++|+||||.|.      +.|.|+|||..++.|+|+.|.+...|   +-|-.....+.||.
T Consensus       332 ~~w~~~~a~r~kAe~llrg~~dGtFLIR~ss------~~g~yalSV~~~~~V~HClIy~tatG---~GFa~pyn~y~tlk  402 (464)
T KOG4637|consen  332 KTWRVRDANRDKAEELLRGKPDGTFLIRESS------KGGCYALSVVHDGEVKHCLIYQTATG---FGFAEPYNLYSTLK  402 (464)
T ss_pred             hHhHHhhhhHHHHHHHhcCCCCCeEEEeecc------CCCceEEEEEECCceeeeEEeecccc---ccccchhHHHHHHH
Confidence            4799999999999999999999999999974      45999999999999999999999887   22333344789999


Q ss_pred             hhhhhhhccccccccccccccccccc
Q psy3210         168 ELICCYERNSLIENFIGLNVRLQLPF  193 (272)
Q Consensus       168 eLV~~y~~~~L~~~~~~l~~~L~~P~  193 (272)
                      +||.||++++|.+..+.+.++|.+|+
T Consensus       403 ~lV~hY~h~SLe~HnDal~ttLr~Pv  428 (464)
T KOG4637|consen  403 ELVLHYQHTSLEQHNDALTTTLRYPV  428 (464)
T ss_pred             HHHHHHhhhhHHhhccccccccccce
Confidence            99999999999999999999999998

>KOG1264|consensus

Probab=99.51  E-value=3.6e-14  Score=137.85  Aligned_cols=105  Identities=30%  Similarity=0.454  Sum_probs=87.8

Q ss_pred             CCcccccEeeeeCC-HHHHHHhccc------CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceE
Q psy3210          83 ENLSEYLWFVGEMG-REKATSLLER------EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQY  155 (272)
Q Consensus        83 ~~l~~~~Wf~g~is-R~~Ae~lL~~------~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~  155 (272)
                      .-+-.+.||||.+. |.+|+++|++      .+||+||||+|+     +..|.|+||+..+++|.|++|.....++..+|
T Consensus       529 ElH~~E~WFHgkle~R~eAekll~eycke~G~~dGtFlVReS~-----tFvgDytLSfwr~grv~HcRIrsk~e~gt~Ky  603 (1267)
T KOG1264|consen  529 ELHFGEKWFHGKLEGRTEAEKLLQEYCKETGGKDGTFLVRESE-----TFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKY  603 (1267)
T ss_pred             hhccchhhhhcccccchHHHHHHHHHHHHhCCCCccEEEeecc-----ccccceeeeeeECCceeeEEEEeeecCCceeE
Confidence            33456799999998 9999999963      359999999995     78899999999999999999998766555689


Q ss_pred             Eeecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         156 FLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       156 ~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      ++.++..|+||.+||.||+.+.|...  .....|+.|++
T Consensus       604 yl~dN~vfdslY~LI~~Y~~~~Lr~a--eF~m~LtePvP  640 (1267)
T KOG1264|consen  604 YLTDNLVFDSLYALIQHYRETHLRCA--EFEMRLTEPVP  640 (1267)
T ss_pred             EEecchhHHHHHHHHHHHHhcccccc--ceEEEecCCCC
Confidence            99999999999999999999987422  23456676764

>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A

Probab=99.49  E-value=4.6e-14  Score=93.68  Aligned_cols=49  Identities=31%  Similarity=0.639  Sum_probs=43.9

Q ss_pred             eeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchh
Q psy3210         200 AEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWG  250 (272)
Q Consensus       200 alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVe  250 (272)
                      |+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+
T Consensus         1 Al~~y~~~~~dELs~~~Gd~i~v~~~~~--~~W~~g~~~g~~G~~P~~yV~   49 (49)
T PF14604_consen    1 ALYDYEAQDPDELSFKKGDVITVLEKSD--DGWWYGRNTGRTGLFPANYVE   49 (49)
T ss_dssp             ESSCBCSSSTTB-EB-TTEEEEEEEESS--TSEEEEEETTEEEEEEGGGEE
T ss_pred             CCccCCCCCcCEeeEcCCCEEEEEEeCC--CCEEEEEECCEEEEECHHhCC
Confidence            6899999999999999999999998766  689999999999999999986

...

>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.31  E-value=3.4e-12  Score=86.68  Aligned_cols=53  Identities=30%  Similarity=0.636  Sum_probs=46.2

Q ss_pred             eeeeccCCCCCCCCCccCCCcEEEEe-eeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         198 AVAEFDFCPTEANQLPLKQGCQVIVL-SKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       198 ~~alydf~~~~~~ELsl~~Gd~i~v~-~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ++|++||.+..+++|+|.+||+|.|+ ++..  .+||.|+.+|+.|+||++||+++
T Consensus         2 ~~a~~d~~~~~~~~Ls~~~Gd~i~v~~~~~~--~~ww~~~~~g~~G~~P~~~v~~~   55 (55)
T PF07653_consen    2 YRAIFDYVAEDPDELSFKKGDVIEVLGEKDD--DGWWLGENNGRRGWFPSSYVEEI   55 (55)
T ss_dssp             EEESSSBESSSTTB-EB-TTEEEEEEEEECS--TSEEEEEETTEEEEEEGGGEEEH
T ss_pred             EEEeEEECCCCCCceEEecCCEEEEEEeecC--CCEEEEEECCcEEEEcHHHEEEC
Confidence            68999999999999999999999999 5554  58999999999999999999874

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....

>KOG2070|consensus

Probab=99.24  E-value=4.9e-12  Score=117.51  Aligned_cols=61  Identities=25%  Similarity=0.547  Sum_probs=55.0

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhhccCC
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLLSSLF  259 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~mk~l~  259 (272)
                      .|+|.|+|.+...|||+|.+||+|+|....+  .|||.|+.+|++||||+|||.|++.-+.|.
T Consensus        19 vvrAkf~F~gsNnDELsf~KgDvItVTq~ee--GGWWEGTlng~TGWFPsnYV~eik~e~pLs   79 (661)
T KOG2070|consen   19 VVRAKFNFQGSNNDELSFSKGDVITVTQVEE--GGWWEGTLNGRTGWFPSNYVREIKSEKPLS   79 (661)
T ss_pred             EEEEEeecccCCCceeccccCCEEEEEEecc--CcceeccccCccCccchHHHHHHhhcCCCC
Confidence            5889999999999999999999999997665  689999999999999999999998655553

>KOG2199|consensus

Probab=99.23  E-value=2.4e-12  Score=116.92  Aligned_cols=54  Identities=28%  Similarity=0.487  Sum_probs=50.2

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWG  250 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVe  250 (272)
                      ...|+|||||++.+.+||+|++||||+|+...+  .+||+|.+.+..|+||+|||.
T Consensus       215 ~rkVRALYDFeAaE~nELsFkaGdIItVLd~s~--~~WWKG~~~~~~GlFPsnfVT  268 (462)
T KOG2199|consen  215 VRKVRALYDFEAAEDNELSFKAGDIITVLDDSD--PNWWKGENHRGIGLFPSNFVT  268 (462)
T ss_pred             chhhhhhhcccccCCCccceecCcEEEEcccCC--cchhccccCCcccccchhhhh
Confidence            346899999999999999999999999998777  789999999999999999997

>KOG1118|consensus

Probab=99.11  E-value=2.3e-11  Score=107.32  Aligned_cols=60  Identities=22%  Similarity=0.360  Sum_probs=54.9

Q ss_pred             eeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhh
Q psy3210         194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       194 ~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~m  255 (272)
                      ....++|+|||+++...||.|++||+|++++++|  ++||.|+..|..||||.|||+.+-.+
T Consensus       305 ~~p~cralYdFepenEgEL~fkeGDlI~l~~QId--enWyeG~~~g~sG~FPvnYv~vlvpl  364 (366)
T KOG1118|consen  305 DQPCCRALYDFEPENEGELDFKEGDLITLTNQID--ENWYEGEKHGESGMFPVNYVEVLVPL  364 (366)
T ss_pred             cchhheeeeccCCCCCCccCcccCceeeehhhcC--cchhhheecCccCccccceeEEeccC
Confidence            4556899999999999999999999999999999  67999999999999999999976554

>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.10  E-value=1.6e-10  Score=76.13  Aligned_cols=46  Identities=28%  Similarity=0.590  Sum_probs=41.4

Q ss_pred             eeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeec
Q psy3210         199 VAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQ  246 (272)
Q Consensus       199 ~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~  246 (272)
                      +|+|||.+...+||+|++||+|.|+++.+  .+||.++..  ++.|+||+
T Consensus         1 ~Alydf~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~~~~~~~~~~G~vP~   48 (48)
T PF00018_consen    1 RALYDFDAEDPDELSFKKGDIIEVLEKSD--DGWWKVRNESTGKEGWVPS   48 (48)
T ss_dssp             EESSCBETSSTTBSEB-TTEEEEEEEESS--SSEEEEEETTTTEEEEEEG
T ss_pred             CCCeeeCCCCCCEEeEECCCEEEEEEecC--CCEEEEEECCCCcEEEeeC
Confidence            58999999999999999999999998887  589999987  69999996

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....

>KOG4348|consensus

Probab=99.02  E-value=4.4e-11  Score=109.81  Aligned_cols=59  Identities=29%  Similarity=0.597  Sum_probs=53.5

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~m  255 (272)
                      ++.+++.|.|.++..|||+|..||+|++++...  +|||+|..+|..||||+|||+|...-
T Consensus       100 ~r~c~v~f~Y~pqndDELelkVGDiIeli~eVE--eGWw~G~Lngk~GmFPsNFVkel~~~  158 (627)
T KOG4348|consen  100 ARICVVTFAYSPQNDDELELKVGDIIELISEVE--EGWWKGKLNGKVGMFPSNFVKELPTP  158 (627)
T ss_pred             ceeEEEEEeecCCCCceeeeeeccHHHhhhHhh--hhhhhceecCcccccchhhceecCCC
Confidence            457889999999999999999999999998776  68999999999999999999986543

>smart00326 SH3 Src homology 3 domains

Probab=98.97  E-value=9.3e-10  Score=74.07  Aligned_cols=53  Identities=28%  Similarity=0.633  Sum_probs=48.2

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWGN  251 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVeE  251 (272)
                      .++|+|||.+...++|+|.+||.|.++++.+  .|||.++.. ++.|+||.+||++
T Consensus         4 ~~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~--~~w~~~~~~~~~~G~vP~~~v~~   57 (58)
T smart00326        4 QVRALYDYTAQDPDELSFKKGDIITVLEKSD--DGWWKGRLGRGKEGLFPSNYVEE   57 (58)
T ss_pred             EEEEeeeeCCCCCCCCCCCCCCEEEEEEcCC--CCeEEEEeCCCCEEEEchHHEEE
Confidence            5789999999999999999999999998765  689999988 9999999999875

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.

>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies

Probab=98.96  E-value=1.4e-09  Score=72.31  Aligned_cols=52  Identities=27%  Similarity=0.586  Sum_probs=46.7

Q ss_pred             eeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCC-eeeeeeccchhh
Q psy3210         198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDE-RVSYFFQLYWGN  251 (272)
Q Consensus       198 ~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g-~~G~fP~~yVeE  251 (272)
                      ++|+|||.+...+||+|.+||.|.+++..+  .|||.++..+ +.|+||.+||++
T Consensus         2 ~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~--~~w~~~~~~~~~~G~vP~~~v~~   54 (54)
T cd00174           2 VRALYDYDARDPDELSFKKGDIIEVLEKSD--DGWWEGRLLGGKRGLFPSNYVEE   54 (54)
T ss_pred             EEEEEeeCCCCCCCCCCCCCCEEEEEEcCC--CCeEEEEECCCCEEEEccccCcC
Confidence            578999999999999999999999998754  6899999876 999999999873

>KOG0790|consensus

Probab=98.96  E-value=7.2e-10  Score=102.40  Aligned_cols=97  Identities=28%  Similarity=0.471  Sum_probs=80.6

Q ss_pred             cccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccch
Q psy3210          87 EYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRS  165 (272)
Q Consensus        87 ~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~s  165 (272)
                      ...|||..++-.+||.+|+. ..+|+||.|.|+     ++++.|+||++.+++|.|++|....+    .|.+.+...|.+
T Consensus         3 s~~wfh~~~~g~~ae~Ll~~~g~dgsfl~r~s~-----sNp~~fsl~~r~~~~v~hikiq~~~~----~~~l~~gekfat   73 (600)
T KOG0790|consen    3 SRRWFHPDLSGVEAETLLKERGVDGSFLARPSE-----SNPGDFSLSVRRGDKVTHIKIQNSGD----FYDLYGGEKFAT   73 (600)
T ss_pred             chhhcCCCccchhHHHHHHHhccccchhhcccc-----CCCcceeEEEEeCCceEEEEEeecCc----cccccCCccccc
Confidence            35799999999999999986 578999999997     45799999999999999999988765    688888888999


Q ss_pred             hhhhhhhhhccc--cccccccccccccccc
Q psy3210         166 IVELICCYERNS--LIENFIGLNVRLQLPF  193 (272)
Q Consensus       166 L~eLV~~y~~~~--L~~~~~~l~~~L~~P~  193 (272)
                      +.|||+||+.+.  |.+. .+.-..|.+|.
T Consensus        74 ~~ELvqyyme~~~~lkek-ng~~ielK~pl  102 (600)
T KOG0790|consen   74 LAELVQYYMEHHGQLKEK-NGDVIELKYPL  102 (600)
T ss_pred             hHHHHHHHHhhhHHHHhc-CCCEEEecCCC
Confidence            999999998766  3332 34445666665

>KOG1930|consensus

Probab=98.96  E-value=6.4e-10  Score=101.81  Aligned_cols=94  Identities=26%  Similarity=0.403  Sum_probs=77.3

Q ss_pred             ccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeC---------------CeeeEEEEEEecCC
Q psy3210          86 SEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTD---------------EKVKHMKVYEKEMD  150 (272)
Q Consensus        86 ~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~---------------~~v~H~~I~~~~~g  150 (272)
                      ...-||..+|+|++|-.||++++.|+|+||+|.     +.+|.|-|.++..               ..|+||.|+....|
T Consensus       210 TSKyWYKP~isREQAIalLrdkePGtFvvRDS~-----SfrGayGLAlKVstPPPs~~~~~g~~~neLVRHFLIE~spkG  284 (483)
T KOG1930|consen  210 TSKYWYKPNISREQAIALLRDKEPGTFVVRDSH-----SFRGAYGLALKVSTPPPSVQPGDGSDSNELVRHFLIEPSPKG  284 (483)
T ss_pred             ccccccCCCCCHHHHHHHhhcCCCCeEEEecCC-----cCCCccceEEEeccCCCcccCCCCCchhhhhhhheeccCCCc
Confidence            345799999999999999999999999999995     7789999998872               35999999987764


Q ss_pred             CcceEEeec---ccccchhhhhhhhhhccccccccccccccccccc
Q psy3210         151 GVPQYFLSQ---SRYFRSIVELICCYERNSLIENFIGLNVRLQLPF  193 (272)
Q Consensus       151 ~~~~~~i~~---~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~  193 (272)
                          ..|.+   ...|.||..||--|.-.+|     .|++.|..|-
T Consensus       285 ----VkLKGC~nEP~FGSLSALV~QHSIt~L-----ALPckL~iP~  321 (483)
T KOG1930|consen  285 ----VKLKGCDNEPVFGSLSALVYQHSITAL-----ALPCKLVIPD  321 (483)
T ss_pred             ----eeccCCCCCCccchhHHHHhhccchhh-----hcceeEeccC
Confidence                55533   4489999999999988886     4666666554

>KOG1029|consensus

Probab=98.95  E-value=2.5e-10  Score=110.99  Aligned_cols=52  Identities=25%  Similarity=0.547  Sum_probs=49.3

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWG  250 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVe  250 (272)
                      .++|+|||.++..|||+|.+||+|.|+++.+  ..||.|+.+|..|+||+|||.
T Consensus      1055 qviamYdY~AqndDELsF~kgdiI~Vlnkde--peWW~Ge~ng~sGLFPSNYV~ 1106 (1118)
T KOG1029|consen 1055 QVIAMYDYEAQNDDELSFKKGDIINVLNKDE--PEWWSGERNGKSGLFPSNYVQ 1106 (1118)
T ss_pred             eeEEeeccccCCcccccccCCCEEEecCCCC--hhhhcccccCccccCcccccc
Confidence            4789999999999999999999999999988  679999999999999999995

>KOG2856|consensus

Probab=98.94  E-value=1.9e-10  Score=103.67  Aligned_cols=56  Identities=30%  Similarity=0.569  Sum_probs=51.6

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVeE~  252 (272)
                      ..|+|||||.+++.|||+|++||.++++...++ .||.+|+.. |++|++|+|||+-+
T Consensus       415 v~vraLYDY~gqE~DElsfkaGd~l~kl~eeDe-qGWC~Grl~~G~vGLyPAnYVe~~  471 (472)
T KOG2856|consen  415 VRVRALYDYAGQEGDELSFKAGDELEKLEEEDE-QGWCKGRLDSGRVGLYPANYVECI  471 (472)
T ss_pred             eeEEeeeccCcccccchhhccccHhhhcCCccc-cccccccccCCcccccchhhhhcc
Confidence            468999999999999999999999999987777 799999998 99999999999854

>KOG4226|consensus

Probab=98.91  E-value=9.5e-10  Score=95.83  Aligned_cols=57  Identities=28%  Similarity=0.599  Sum_probs=51.2

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~m  255 (272)
                      .+..-|.|.++..|||+|.+|+.|.|..|-.  .|||+|..+|.+||||+|||.|.---
T Consensus       109 ~AvVKf~Y~a~~eDELsLtKGtrv~vmEKss--DGWWrG~~ng~VGWFPSNYv~E~~ds  165 (379)
T KOG4226|consen  109 PAVVKFNYVAEREDELSLTKGTRVTVMEKSS--DGWWRGSYNGQVGWFPSNYVTEEVDS  165 (379)
T ss_pred             ceEEEEeeccccccccccccCcEEEEEEecc--CcceecccCCeeccccccceehhccc
Confidence            3667899999999999999999999999887  68999999999999999999876444

>KOG0162|consensus

Probab=98.83  E-value=1.8e-09  Score=104.77  Aligned_cols=56  Identities=21%  Similarity=0.565  Sum_probs=51.2

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ...+.|+|||.+++.+||+|++||+|+++.+..  .|||.|..+|+.||||.+||+|.
T Consensus      1051 ~p~~~A~Y~y~gq~~dEls~~~~diIei~~edp--SGWw~gk~~~keG~~P~~Yv~~~ 1106 (1106)
T KOG0162|consen 1051 NPVCEALYDYPGQDVDELSFKKGDIIEIMREDP--SGWWLGKLNGKEGLFPGNYVTEY 1106 (1106)
T ss_pred             CcceeeeccCCCCCcccccccCCCEEEEeccCC--CcchhhccCCccccccccccccC
Confidence            356889999999999999999999999997766  79999999999999999999873

>KOG4225|consensus

Probab=98.80  E-value=3.3e-09  Score=97.75  Aligned_cols=57  Identities=30%  Similarity=0.470  Sum_probs=52.3

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|+|.++...||+|.+||+|.|+.+.+  ..|+.|+.+|+.|+||.+|||.+..
T Consensus       231 ~~aralf~F~~qt~kEL~~~kGDIVyI~rkvD--~nWyeGEhhGr~GifP~sYvE~~~~  287 (489)
T KOG4225|consen  231 RAARALFDFEAQTPKELPFNKGDIVYILRKVD--QNWYEGEHHGRVGIFPASYVEILTP  287 (489)
T ss_pred             chhhheeccccCCccccccCCCCEEEEEeecc--CceeeeeecceecceechheeecCc
Confidence            34889999999999999999999999999888  6799999999999999999996544

>KOG4348|consensus

Probab=98.77  E-value=4.1e-09  Score=97.05  Aligned_cols=59  Identities=22%  Similarity=0.534  Sum_probs=52.2

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      +.+++.+|-|+++..|||.|++||+|+++.+.-.+-|||+|+.+|+.|.||.|||+-++
T Consensus       261 Keycrv~F~Ye~qndDELt~KEgdil~lItK~cgdaGWweGELnGk~GvFPDNFv~lv~  319 (627)
T KOG4348|consen  261 KEYCRVKFVYEPQNDDELTLKEGDILILITKNCGDAGWWEGELNGKKGVFPDNFVELVQ  319 (627)
T ss_pred             hhheeeeeeecCCCccceeeccccEEEEecccccccceeeeeecCccccCCchhhhhcC
Confidence            34688999999999999999999999999863333799999999999999999999766

>KOG1029|consensus

Probab=98.54  E-value=2.6e-08  Score=97.21  Aligned_cols=58  Identities=22%  Similarity=0.535  Sum_probs=52.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhhc
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLLS  256 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~mk  256 (272)
                      ..+.|+|.|.+...++|+|.+||+|+|+.+-+   .||.|++.|++||||.+||+|+.+..
T Consensus       814 lq~iA~y~wrakke~dLsFskgd~I~Vlekqe---mwW~G~v~g~~GwFPksYVk~~~~~t  871 (1118)
T KOG1029|consen  814 LQAIALYPWRAKKENDLSFSKGDTITVLEKQE---MWWFGEVAGEIGWFPKSYVKEVGAIT  871 (1118)
T ss_pred             hhHHhhccccccccccccccCCCeeeeehhcc---ceecccccCccCcCcHHhhhhccccc
Confidence            35789999999999999999999999998776   49999999999999999999887654

>KOG3875|consensus

Probab=98.43  E-value=4.7e-08  Score=86.73  Aligned_cols=58  Identities=24%  Similarity=0.232  Sum_probs=50.2

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCc---CCeEEEEeC--Ceeeeeeccchhhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQ---KGWWKGKID--ERVSYFFQLYWGNFRL  254 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~---~gwW~G~~~--g~~G~fP~~yVeE~~~  254 (272)
                      +++|+|||.+.++.||+|++||++.|..|.+..   ..||.....  +++|++|.|||+.+.-
T Consensus       270 ~arA~YdF~a~np~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvkIi~r  332 (362)
T KOG3875|consen  270 FARALYDFVARNPVELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVKIIGR  332 (362)
T ss_pred             HHHHHhhhhcCCHHHhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhhhhhc
Confidence            588999999999999999999999999877653   458887764  6899999999998766

>KOG4225|consensus

Probab=98.34  E-value=2.8e-07  Score=85.21  Aligned_cols=52  Identities=23%  Similarity=0.449  Sum_probs=48.3

Q ss_pred             eeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEE--EeCCeeeeeeccchhh
Q psy3210         198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKG--KIDERVSYFFQLYWGN  251 (272)
Q Consensus       198 ~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G--~~~g~~G~fP~~yVeE  251 (272)
                      ++|+|.|.++..|||.|.+||+|.|+.|-+  .||+.|  +..|..|.||-|||+.
T Consensus       435 yrAly~Y~pqnedeLEl~egDii~VmeKcd--dgWfvGts~rtg~fGtFPgnyV~~  488 (489)
T KOG4225|consen  435 YRALYSYRPQNEDELELREGDIIDVMEKCD--DGWFVGTSRRTGKFGTFPGNYVKR  488 (489)
T ss_pred             ceeccccCCCCchhheeccCCEEeeeeccc--CcceeccceecccccccCcccccc
Confidence            689999999999999999999999999998  689999  5569999999999984

>KOG1843|consensus

Probab=98.31  E-value=2.2e-07  Score=85.24  Aligned_cols=57  Identities=23%  Similarity=0.445  Sum_probs=52.5

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGN  251 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE  251 (272)
                      ...++|+|+|..+...+|+|.+||+|.++++-+....||.|..+++.|+||+|||+-
T Consensus       416 ~n~a~a~ysfage~~GDl~f~kgDii~il~ks~s~~dwwtgr~~~~egifPanyv~~  472 (473)
T KOG1843|consen  416 PNIATALYSFAGEQPGDLSFQKGDIITILKKSDSANDWWTGRGNGYEGIFPANYVSL  472 (473)
T ss_pred             cceeeeeehhccCCCCCcccccCceEEEecCCcchhhHHHhhccccccccccceecc
Confidence            457899999999999999999999999999877768899999999999999999973

>KOG3751|consensus

Probab=98.22  E-value=5.3e-07  Score=85.11  Aligned_cols=98  Identities=28%  Similarity=0.501  Sum_probs=76.0

Q ss_pred             CCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEe-ec
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFL-SQ  159 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i-~~  159 (272)
                      ..+..+.||||.|+|+++.++++.  -.+|.||+|+|.+.     +..|++++....+|+||+|.-.++.+. .|+- ..
T Consensus       514 ~~h~sq~~~~~kis~~es~~~ikq~glv~~~~l~r~sqsn-----P~~~~~~~~~~~~v~~~~~~P~~~~~~-~~~t~~~  587 (622)
T KOG3751|consen  514 AIHRSQTWFHGKISRDESQRLIKQQGLVDGLFLVRDSQSN-----PKIFVLSLCHPQKVKHFQILPVEDDGC-TFFTLDD  587 (622)
T ss_pred             hhcccccCcccccCchhhhhHHHhcccceeeeeecccccC-----cchhhhhccCCccccceEEecCCCCCc-eeeccCC
Confidence            345678999999999999998876  35799999999865     577999999999999999987555433 3333 22


Q ss_pred             -ccccchhhhhhhhhhccccccccccccccccc
Q psy3210         160 -SRYFRSIVELICCYERNSLIENFIGLNVRLQL  191 (272)
Q Consensus       160 -~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~  191 (272)
                       ...|.++..|+++|+-+.     ..+++.|..
T Consensus       588 g~t~~sd~~ql~~~~ql~k-----~~l~~al~~  615 (622)
T KOG3751|consen  588 GPTKFSDLIQLVEFYQLNK-----GVLPCALKH  615 (622)
T ss_pred             CCccccccccccchhhcCC-----CcchHHHHH
Confidence             347999999999999885     455555543

>KOG3655|consensus

Probab=98.19  E-value=5.2e-07  Score=84.33  Aligned_cols=56  Identities=18%  Similarity=0.407  Sum_probs=50.7

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||++-+..|++|-.+|.|+++...+  .|||.|... |+.|+||+|||+-+
T Consensus       427 ~q~A~A~~dyqAAddtEisf~p~d~it~Id~vd--egww~g~~pdG~~glfPaNyV~li  483 (484)
T KOG3655|consen  427 PQTARALYDYQAADDTEISFDPPDAITLIDQVD--EGWWTGQGPDGEVGLFPANYVELI  483 (484)
T ss_pred             CCCccccccccccCCcccccCCccccccccccC--CccccccCCCCCcCcccccccccC
Confidence            456899999999999999999999999999888  789999975 89999999999854

>KOG2546|consensus

Probab=98.17  E-value=9.8e-07  Score=81.40  Aligned_cols=54  Identities=26%  Similarity=0.513  Sum_probs=49.9

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .++++|||.+...|||+|.+|.+|.|++|.+  .|||+|..+|-.|+||-|||+.+
T Consensus       425 kVv~iydy~~~KddeLsf~E~ailyv~kknd--dgw~EgV~~~VTglFpgnyve~~  478 (483)
T KOG2546|consen  425 KVVAIYDYTADKDDELSFAEGAILYVLKKND--DGWYEGVQDGVTGLFPGNYVEPL  478 (483)
T ss_pred             HHHhhcccccccccccccccccEEEEEEecC--CcchhheecCcceeccCcccccc
Confidence            4789999999999999999999999998866  68999999999999999999954

>KOG3697|consensus

Probab=98.11  E-value=3.5e-06  Score=74.26  Aligned_cols=106  Identities=21%  Similarity=0.123  Sum_probs=80.4

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCC-----------------------------------------
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGP-----------------------------------------  121 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~-----------------------------------------  121 (272)
                      +.....+||+|++++++++..|.  ++|.|++|.+...|                                         
T Consensus       196 d~p~k~pp~~g~l~~~~~q~~l~--~~a~~~a~~~~~~p~~~~ls~l~~~n~ppp~~p~~kl~~~~~~~n~~~~~~rd~~  273 (345)
T KOG3697|consen  196 DIPSKMPPPGGFLDTRLKQRPLA--PDAAQFAGKEQTYPQGRHLSDLRQGNSPPPSTPEGKLHVAPTYVNTQQIPRRDLF  273 (345)
T ss_pred             cccccCCCCCCccchhhhhccCC--cccchhhhhccCCcccccccchhhcCCCCCCCCCccCCCCcccccccccchhhhc
Confidence            34456799999999999999997  45788877654321                                         


Q ss_pred             -CCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         122 -THPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       122 -~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                       ..+.+|.|+|+=..++..||..+.-.++    -.... .+.|+|+..||+|+..+.|+.-..+....|++|+++
T Consensus       274 ~~~~~~gqyvltgl~~~~~khlllvdpeg----vvrtk-d~~fdsishli~yh~~~~lpiis~~sel~l~~pv~r  343 (345)
T KOG3697|consen  274 DETTTPGQYVLTGLQSGQPKHLLLVDPEG----VVRTK-DRRFDSISHLINYHMDNHLPIISAGSELCLQQPVER  343 (345)
T ss_pred             cccCCCccEEEecccCCCcceEEEECCcc----ceecc-cchhhHHHHHHHHhhhccCceecCcchhhhhCcccc
Confidence             0245789999999999999998875543    34433 457999999999999999876666666678888754

>KOG0515|consensus

Probab=98.10  E-value=1.1e-06  Score=83.15  Aligned_cols=56  Identities=20%  Similarity=0.478  Sum_probs=50.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCc-CCeEEEEeCCeeeeeeccchhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQ-KGWWKGKIDERVSYFFQLYWGN  251 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~-~gwW~G~~~g~~G~fP~~yVeE  251 (272)
                      ..+-|+|||+++..|||+|.+||-++|+.+.|++ ..||-.+.+|+.|++|.||+--
T Consensus       684 G~vYAlwdYeaqf~DELsf~eGd~lTvirr~d~~eteWWwa~lng~eGyVPRnylgL  740 (752)
T KOG0515|consen  684 GVVYALWDYEAQFEDELSFDEGDELTVIRRDDEVETEWWWARLNGEEGYVPRNYLGL  740 (752)
T ss_pred             ceeEEeecccccccccccccCCceeEEEecCCcchhhhhhHhhcCcccccchhhhhc
Confidence            3467999999999999999999999999987776 7799999999999999999863

>KOG1702|consensus

Probab=98.07  E-value=2.1e-06  Score=72.12  Aligned_cols=56  Identities=13%  Similarity=0.245  Sum_probs=49.5

Q ss_pred             eeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhh
Q psy3210         194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGN  251 (272)
Q Consensus       194 ~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE  251 (272)
                      ...+.+|.|||.+++.||++|..||.|.....++  .||..|.+.  |..|+.|+||||-
T Consensus       206 ~gktyra~ydysaqdedevsF~dgd~ivnvq~id--dGWmygtv~rtg~tGmlpaNyie~  263 (264)
T KOG1702|consen  206 TGKTYRAFYDYSAQDEDEVSFVDGDYIVNVQSID--DGWMYGTVVRTGWTGMLPANYIEF  263 (264)
T ss_pred             CCccchhhccCcccCcceeEEecCCeEEEEEecc--CCceeeEEEeccccCCCchhheee
Confidence            3457899999999999999999999998888888  679888874  8999999999984

>KOG2222|consensus

Probab=98.05  E-value=1.6e-06  Score=81.29  Aligned_cols=56  Identities=16%  Similarity=0.329  Sum_probs=51.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+.||...+.+||.|+++|+|+++++.+  +..|.|+.+|-.||||+.||+-+.
T Consensus       549 krakal~df~r~dddelgfrkndiitiisekd--ehcwvgelnglrgwfpakfvelld  604 (848)
T KOG2222|consen  549 KRAKALHDFAREDDDELGFRKNDIITIISEKD--EHCWVGELNGLRGWFPAKFVELLD  604 (848)
T ss_pred             HHHHHHhhhhhccccccccccccEEEEeecCC--cceeeeccccccccchHHHHHHHH
Confidence            35789999999999999999999999999888  579999999999999999998554

>KOG3632|consensus

Probab=97.84  E-value=1.2e-05  Score=80.75  Aligned_cols=58  Identities=24%  Similarity=0.430  Sum_probs=50.8

Q ss_pred             eeeeeeccCCCCC--------CCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTE--------ANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~--------~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ...+|+|||++..        ..||.|++|+||+|++..++ .|+|.|+.+|+.|++|.|||.|+.+
T Consensus      1139 rifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~GDkDa-dgFY~GE~ngr~GlIPcNmvae~~v 1204 (1335)
T KOG3632|consen 1139 RIFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVLGDKDA-DGFYMGELNGRRGLIPCNMVAEQPV 1204 (1335)
T ss_pred             eeeEeeeccCccccCCCCChhhhccccccCcEEEEeccccc-cceeecccccccccccccccccccC
Confidence            3568999997753        57999999999999998777 6999999999999999999998754

>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A

Probab=97.62  E-value=0.00036  Score=60.46  Aligned_cols=82  Identities=16%  Similarity=0.248  Sum_probs=59.8

Q ss_pred             cccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEee-CCeeeEEEEEEecCCC----cceEEeeccc
Q psy3210          87 EYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKT-DEKVKHMKVYEKEMDG----VPQYFLSQSR  161 (272)
Q Consensus        87 ~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~-~~~v~H~~I~~~~~g~----~~~~~i~~~~  161 (272)
                      .+|-|+ +++-.+|++.|.+...|.++||.|+..     ....+++++. ++...|+-|.+.+...    |..+.|++ .
T Consensus        37 ~HP~F~-n~~~~qAe~~L~~~~~Ge~iIRPSSkG-----~dhL~vTwKv~d~vyqHidV~E~~K~n~~slG~~L~i~~-~  109 (220)
T PF14633_consen   37 KHPLFK-NFNYKQAEEYLADQDVGEVIIRPSSKG-----PDHLTVTWKVADGVYQHIDVKEEDKENEFSLGKTLKIGG-E  109 (220)
T ss_dssp             CSTTEE-SS-HHHHHHHHCCS-TT-EEEEE-TTT-----TTEEEEEEEEETTEEEEEEEEEECSSSTTS-SSEEEETT-E
T ss_pred             cCCCcc-CCCHHHHHHHHhcCCCCCEEEeeCCCC-----CCeEEEEEEEcCCcEEEEEEEECCCcCccccCcEEEECC-e
Confidence            456677 899999999999988899999999754     3568889888 5677799998765321    23566664 4


Q ss_pred             ccchhhhhhhhhhc
Q psy3210         162 YFRSIVELICCYER  175 (272)
Q Consensus       162 ~F~sL~eLV~~y~~  175 (272)
                      .|.+|.|||.-|-.
T Consensus       110 ~yeDLDEii~r~V~  123 (220)
T PF14633_consen  110 EYEDLDEIIARHVE  123 (220)
T ss_dssp             EESSHHHHHHHCHH
T ss_pred             EECCHHHHHHHHHH
Confidence            69999999998843

>KOG3523|consensus

Probab=97.47  E-value=2.5e-05  Score=75.16  Aligned_cols=55  Identities=20%  Similarity=0.306  Sum_probs=48.6

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGNFR  253 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE~~  253 (272)
                      .+.+...|.+..+|||+|+.+|++.|+.+..  .||.+|+-.  |..||||..||+|+.
T Consensus       610 Qv~~~~sy~a~q~Del~Le~~Dvv~v~~k~~--DGWl~GeRl~Dge~GWFP~~~veeI~  666 (695)
T KOG3523|consen  610 QVQCVHSYKAKQPDELTLELADVVNVLQKTP--DGWLEGERLRDGERGWFPSSYVEEIT  666 (695)
T ss_pred             hhheeeccccCCCceeeeehhhhhhhhhcCC--CccccccccccCccCcchHHHHHHhc
Confidence            3567778999999999999999999999988  689999854  899999999999873

>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger

Probab=97.32  E-value=0.00012  Score=48.88  Aligned_cols=32  Identities=28%  Similarity=0.605  Sum_probs=24.9

Q ss_pred             ehhcccCCCceecCcCCcchhcccccC-CCCCC
Q psy3210          14 VTLKSRGLRPLCSQACYLACHKQCIPH-TGRCG   45 (272)
Q Consensus        14 ~~~~g~~~qg~~c~~c~~~~h~~c~~~-~~~C~   45 (272)
                      .++-|++.|||.|..|+..+|++|+.. +..|+
T Consensus        19 ~~i~g~~~~g~~C~~C~~~~H~~C~~~~~~~C~   51 (53)
T PF00130_consen   19 KFIWGLGKQGYRCSWCGLVCHKKCLSKVPPSCG   51 (53)
T ss_dssp             SBECSSSSCEEEETTTT-EEETTGGCTSSSBSS
T ss_pred             cccCCCCCCeEEECCCCChHhhhhhhhcCCCCC
Confidence            455789999999999999999999554 44553

Phorbol esters (PE) are analogues of DAG and potent tumour promoters that cause a variety of physiological changes when administered to both cells and tissues. DAG activates a family of serine/threonine protein kinases, collectively known as protein kinase C (PKC) []. Phorbol esters can directly stimulate PKC. The N-terminal region of PKC, known as C1, has been shown [] to bind PE and DAG in a phospholipid and zinc-dependent fashion. The C1 region contains one or two copies (depending on the isozyme of PKC) of a cysteine-rich domain, which is about 50 amino-acid residues long, and which is essential for DAG/PE-binding. The DAG/PE-binding domain binds two zinc ions; the ligands of these metal ions are probably the six cysteines and two histidines that are conserved in this domain.; GO: 0035556 intracellular signal transduction; PDB: 1RFH_A 2FNF_X 3PFQ_A 1PTQ_A 1PTR_A 2VRW_B 1XA6_A 2ENN_A 1TBN_A 1TBO_A ....

>KOG4236|consensus

Probab=97.25  E-value=6.2e-05  Score=72.17  Aligned_cols=36  Identities=25%  Similarity=0.426  Sum_probs=33.0

Q ss_pred             heehhcccCCCceecCcCCcchhccc-ccCCCCCCCC
Q psy3210          12 SIVTLKSRGLRPLCSQACYLACHKQC-IPHTGRCGTG   47 (272)
Q Consensus        12 ~~~~~~g~~~qg~~c~~c~~~~h~~c-~~~~~~C~~~   47 (272)
                      -+.||||||.||..|+-|+..|||.| .+++.+|-+.
T Consensus       284 CkkLLkGL~rQGlqCkDCk~NcHkrCa~~v~~dClge  320 (888)
T KOG4236|consen  284 CKKLLKGLFRQGLQCKDCKFNCHKRCAMKVPNDCLGE  320 (888)
T ss_pred             HHHHHHHHHhcCcccccCCcchhhhhhhhcccccccc
Confidence            47899999999999999999999999 8889999754

>KOG4278|consensus

Probab=97.16  E-value=0.00029  Score=68.90  Aligned_cols=62  Identities=19%  Similarity=0.315  Sum_probs=51.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhhccC
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLLSSL  258 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~mk~l  258 (272)
                      +..+|+|||-+...+.|++.+||.++|++.--. ..|.+.+.+.-.||+|+||+...+.+.|.
T Consensus        91 NLFVALYDFvasGdntLSitKGeklRvLGYN~N-gEWcEartKNGqGWVPSNyItPvNSLeKh  152 (1157)
T KOG4278|consen   91 NLFVALYDFVASGDNTLSITKGEKLRVLGYNKN-GEWCEARTKNGQGWVPSNYITPVNSLEKH  152 (1157)
T ss_pred             ceeEeeeeeeccccceeeeecCceEEEeeecCC-CcceeecccCCCccccccccccccchhhc
Confidence            357899999999999999999999999974332 34888887544499999999999988874

>KOG3632|consensus

Probab=96.92  E-value=0.00043  Score=70.04  Aligned_cols=59  Identities=19%  Similarity=0.321  Sum_probs=51.7

Q ss_pred             eeeeeccCCCCC-------CCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhhc
Q psy3210         197 IAVAEFDFCPTE-------ANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLLS  256 (272)
Q Consensus       197 ~~~alydf~~~~-------~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~mk  256 (272)
                      ..+|.|||.+++       ..||.|+.||+|.|.+++++ .|.+.|+.+|..|++|++|+++.++-+
T Consensus      1246 ~mvaa~dydpqeSSpg~dgeAelafraGdIitVfg~mdd-dgfyyGelngqkglvpsnfle~p~~e~ 1311 (1335)
T KOG3632|consen 1246 QMVAASDYDPQESSPGLDGEAELAFRAGDIITVFGKMDD-DGFYYGELNGQKGLVPSNFLEAPNAEK 1311 (1335)
T ss_pred             hhhhhhcCCcccCCCCcccceeeccccCCeEEeeccccC-CcccccccCCccCccccccccCCCccc
Confidence            467899998876       46999999999999999987 699999999999999999999875543

>KOG4566|consensus

Probab=96.88  E-value=0.0013  Score=58.15  Aligned_cols=87  Identities=21%  Similarity=0.305  Sum_probs=67.8

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec---
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ---  159 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~---  159 (272)
                      +.+...+||+|.+.+.+|+..|...+.|+||||+|...     +..+.|+++....-+..+|...++    .|....   
T Consensus        47 ~~~~~~g~~w~~~~~~~~~~~l~~~p~~~~l~Rdss~~-----~~~~~I~vk~~~g~~~~r~~~~~~----sfr~ds~~~  117 (258)
T KOG4566|consen   47 SLLDSSGHYWGLETANEAELCLGQEPRGTFLVRDSSHR-----PYLFTISVKTHSGPKNLRIQYQDS----SFRLDSSHR  117 (258)
T ss_pred             eccccCCcccccccchhHHHhhcCCCccceeeecCcCc-----cccceeEeeeccCCCCcccccccc----ceecccccc
Confidence            45566789999999999999998888999999999744     477899999987777777876653    343321   


Q ss_pred             ---c-cccchhhhhhhhhhcccc
Q psy3210         160 ---S-RYFRSIVELICCYERNSL  178 (272)
Q Consensus       160 ---~-~~F~sL~eLV~~y~~~~L  178 (272)
                         . ..|+.+..++.+|....+
T Consensus       118 ~~~pl~~~e~~~~~~~~y~~~~~  140 (258)
T KOG4566|consen  118 HTPPLISFEDVEVLIHHYRQSRK  140 (258)
T ss_pred             cCCCcccChhHHHHHHhhhhhhh
Confidence               1 379999999999965544

>KOG0695|consensus

Probab=96.83  E-value=0.00054  Score=62.62  Aligned_cols=36  Identities=22%  Similarity=0.299  Sum_probs=30.4

Q ss_pred             eehhcccCCCceecCcCCcchhccc-ccCCCCCCCCC
Q psy3210          13 IVTLKSRGLRPLCSQACYLACHKQC-IPHTGRCGTGV   48 (272)
Q Consensus        13 ~~~~~g~~~qg~~c~~c~~~~h~~c-~~~~~~C~~~~   48 (272)
                      --.+=|+..|||+|-.|..-|||+| -.++-.|+.+.
T Consensus       148 ~d~iwglgrqgyrcinckl~vhkkch~~v~~~cg~~~  184 (593)
T KOG0695|consen  148 SDRIWGLGRQGYRCINCKLLVHKKCHGLVPLTCGKHM  184 (593)
T ss_pred             hhhhhhcccccceeecceeehhhhhcccccchhhhhc
Confidence            3356699999999999999999999 66677898764

>KOG4429|consensus

Probab=96.82  E-value=0.00066  Score=60.32  Aligned_cols=55  Identities=16%  Similarity=0.078  Sum_probs=48.7

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ..+.|+|+|.+...+||....||++++-.+..  .|||.+.+.|..+-||+.||+|+
T Consensus       364 ~lcdafYSfqarqddel~~e~gditif~Ekke--eg~~f~rl~gd~~hf~Aa~iEea  418 (421)
T KOG4429|consen  364 ILCDAFYSFQARQDDELGGEIGDITIFDEKKE--EGPTFCRLLGDFEHFHAAEIEEA  418 (421)
T ss_pred             HHhhhhhccccccccccCCcccceeeecCccc--CCCceeeeccccCCCcHHHHHHh
Confidence            45779999999999999999999986666555  68999999999999999999986

>KOG4773|consensus

Probab=96.79  E-value=0.00021  Score=64.75  Aligned_cols=54  Identities=28%  Similarity=0.403  Sum_probs=48.9

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .+.|++||.+....||.|.+||++.+..+.+  ++||.|+..+..||+|..|++.+
T Consensus       177 ~~~a~~df~gns~~EL~l~agdV~~~~~r~e--k~W~~gk~R~~~g~yp~sF~~~l  230 (386)
T KOG4773|consen  177 RAEASFDFPGNSKLELNLVAGDVEFLLSRDE--KYWLLGKVRGLTGYYPDSFVKQL  230 (386)
T ss_pred             HHHhhccCCCCccceeeeehhhHHHHHhhcc--cceeeeeeccccccccHHhhhhh
Confidence            4678999999999999999999988887776  78999999999999999999865

>KOG4575|consensus

Probab=96.78  E-value=0.0013  Score=63.90  Aligned_cols=55  Identities=16%  Similarity=0.175  Sum_probs=42.9

Q ss_pred             ccccceeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE-eC--Ceeeeeeccch
Q psy3210         189 LQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK-ID--ERVSYFFQLYW  249 (272)
Q Consensus       189 L~~P~~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~-~~--g~~G~fP~~yV  249 (272)
                      ++.|+   .++|+|.+.++...+|.|.+||+|+++. .+  .|||-+. ..  ...|+||+|||
T Consensus         5 ~q~p~---~vrA~y~w~ge~eGdl~f~egDlie~tr-I~--dgkwwi~lhrNk~~~g~fpsNFv   62 (874)
T KOG4575|consen    5 KQLPC---MVRALYAWPGEREGDLKFTEGDLIEQTR-IE--DGKWWILLHRNKDEDGLFPSNFV   62 (874)
T ss_pred             cCCCc---eEEeeccCCCCcccccceecccceeEEe-ec--cceeeeeeeecccccccCcccce
Confidence            44455   5899999999999999999999999984 44  3555543 32  57899999999

>KOG3601|consensus

Probab=96.78  E-value=0.00019  Score=60.91  Aligned_cols=52  Identities=23%  Similarity=0.389  Sum_probs=46.8

Q ss_pred             eeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchh
Q psy3210         198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWG  250 (272)
Q Consensus       198 ~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVe  250 (272)
                      +.+++||.+...+||+|.+||.+++++.+++ ..|.+.+..|..|++|.||.+
T Consensus         3 a~a~n~f~a~i~dELsFlkg~~lk~l~~~d~-~nw~~ael~g~~g~~P~Nai~   54 (222)
T KOG3601|consen    3 AVAKNDFLAGIRDELSFLKGDNLKILNMEDD-INWYKAELDGPEGFIPKNAIR   54 (222)
T ss_pred             hhhhhhhhhcCcccceeecCCceEecchHHh-hhhhhHhhcCccccCcccccc
Confidence            5788999999999999999999999987765 689999999999999999984

>KOG3771|consensus

Probab=96.67  E-value=0.00069  Score=63.82  Aligned_cols=54  Identities=11%  Similarity=0.147  Sum_probs=41.9

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWG  250 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVe  250 (272)
                      ..++|+|||.+.+.+||+|..||+|.|+. .++...||.|...|..+-++.+|+.
T Consensus       401 ~~v~a~~dy~a~~~deLsf~~gd~i~vi~-s~~~~e~~eg~~mg~ke~~~~~~~~  454 (460)
T KOG3771|consen  401 YKVKALHDYAAQDTDELSFEAGDVILVIP-SDNPEEQDEGWLMGVKESDWNGLFP  454 (460)
T ss_pred             cceeccccccccccccccccCCCEEEEec-CCCccchhhHHHhhhccccccccee
Confidence            35889999999999999999999999997 3333668888887655555555544

>KOG4792|consensus

Probab=96.57  E-value=0.0019  Score=55.53  Aligned_cols=54  Identities=20%  Similarity=0.174  Sum_probs=43.6

Q ss_pred             eeeeeccC--CCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDF--CPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf--~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .++++++-  .+.+...|.|+.||+|.|..+.-  .|-|+|+++|+.|.||-.||+-.
T Consensus       229 ~Arv~q~RVPnAYDkTaL~levGdiVkVTk~ni--nGqwegElnGk~G~fPfThvrf~  284 (293)
T KOG4792|consen  229 YARVIQKRVPNAYDKTALALEVGDIVKVTKKNI--NGQWEGELNGKIGHFPFTHVRFT  284 (293)
T ss_pred             heeeehhcCCCccChhhhhhhcCcEEEEEeecc--CceeeeeecCccccccceeEEee
Confidence            34444444  45567889999999999998776  68999999999999999998743

>KOG2528|consensus

Probab=96.55  E-value=0.00085  Score=62.74  Aligned_cols=56  Identities=23%  Similarity=0.325  Sum_probs=47.7

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWGNFR  253 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVeE~~  253 (272)
                      .++|+|||.....+|++...||++.+.....- .|||.|... |..|.||+.||+-+.
T Consensus         4 k~RamyDf~~E~~sElsi~~~evl~i~~e~~~-~GwLeg~Nsrge~GlfPa~yVeV~~   60 (490)
T KOG2528|consen    4 KARAMYDFQSEGHSELSIWEGEVLSITSEDVI-EGWLEGSNSRGERGLFPASYVEVTR   60 (490)
T ss_pred             chhhhcchhhcccccccccccceeeecCcccc-cccccCCCccCccCCCcccceeeec
Confidence            47899999998999999999999988865432 799999864 899999999998543

>cd00029 C1 Protein kinase C conserved region 1 (C1)

Probab=96.47  E-value=0.0016  Score=42.50  Aligned_cols=29  Identities=21%  Similarity=0.351  Sum_probs=23.9

Q ss_pred             ehhcccCCCceecCcCCcchhcccccCCC
Q psy3210          14 VTLKSRGLRPLCSQACYLACHKQCIPHTG   42 (272)
Q Consensus        14 ~~~~g~~~qg~~c~~c~~~~h~~c~~~~~   42 (272)
                      .++.|+..|||.|..|+..+|++|...++
T Consensus        19 ~~i~~~~~~~~~C~~C~~~~H~~C~~~v~   47 (50)
T cd00029          19 KSIWGLFKQGLRCSWCKVKCHKKCADKVP   47 (50)
T ss_pred             hhhhccccceeEcCCCCCchhhhhhccCC
Confidence            34567778999999999999999966544

Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second messenger, released by activation of Phospholipase D. Phorbol Esters (PE) can act as analogues of DAG and mimic its downstream effects in, for example, tumor promotion. Protein Kinases C are activated by DAG/PE, this activation is mediated by their N-terminal conserved region (C1). DAG/PE binding may be phospholipid dependent. C1 domains may also mediate DAG/PE signals in chimaerins (a family of Rac GTPase activating proteins), RasGRPs (exchange factors for Ras/Rap1), and Munc13 isoforms (scaffolding proteins involved in exocytosis).

>KOG1451|consensus

Probab=96.44  E-value=0.0027  Score=61.35  Aligned_cols=56  Identities=13%  Similarity=0.255  Sum_probs=47.1

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGN  251 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE  251 (272)
                      ...++++|.-.+..+.|++|..|.++.-.-...+ .||..|+.+|..|++|+|||+.
T Consensus       756 ~rk~k~lyAc~a~h~selsf~~gt~f~nv~~S~e-~Gwl~GtLnGktglip~nyve~  811 (812)
T KOG1451|consen  756 SRRVKTLYACTADHHSELSFEPGTIFTNVYESNE-DGWLVGTLNGKTGLIPSNYVEP  811 (812)
T ss_pred             cccccceeccCCCCcccccccCcceeeeecccCC-CCceeeecCCCcccCcccccCc
Confidence            3457889999999999999999988766543333 6899999999999999999985

>KOG3725|consensus

Probab=96.18  E-value=0.0016  Score=57.02  Aligned_cols=56  Identities=18%  Similarity=0.199  Sum_probs=50.6

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGN  251 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE  251 (272)
                      ..++.+|||++-...||++...|+|+|..-.|-+.+|..|+..++.|-+|..|++-
T Consensus       318 rkArVlyDYdAa~s~ElslladeiitVyslpGMD~dwlmgErGnkkGKvPvtYlEL  373 (375)
T KOG3725|consen  318 RKARVLYDYDAALSQELSLLADEIITVYSLPGMDADWLMGERGNKKGKVPVTYLEL  373 (375)
T ss_pred             cceeeeecccccchhhhhhhhcceEEEEecCCCChHHhhhhhcCCCCCcchhHHHh
Confidence            45889999999999999999999999998777667899999999999999999984

>KOG3557|consensus

Probab=96.04  E-value=0.0017  Score=63.22  Aligned_cols=58  Identities=22%  Similarity=0.395  Sum_probs=48.8

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchhhhhhhc
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWGNFRLLS  256 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVeE~~~mk  256 (272)
                      ..+..+|||.+....||+..+||+++|+. .  ..+||+.... |+.|++|.|-+..++...
T Consensus       501 k~~~~~Ydf~arNs~ELsV~k~E~LEvl~-d--~R~WW~~kn~~G~~GyvP~nIL~~~~~~~  559 (721)
T KOG3557|consen  501 KWVLVLYDFQARNSSELSVKKGEVLEVLD-D--GRKWWKVKNGHGRAGYVPSNILAPLQPEH  559 (721)
T ss_pred             eeeeeehhhhcccchhhhhhhhhhhhhhh-c--cccceeccCccCCCCCcchhhhccCCCcc
Confidence            36788999999999999999999998883 2  2789998875 899999999988766543

>KOG0197|consensus

Probab=95.96  E-value=0.0023  Score=61.03  Aligned_cols=56  Identities=21%  Similarity=0.491  Sum_probs=46.5

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcE-EEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQ-VIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~-i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~  252 (272)
                      ...+.|+|||.+....+|+|.+||. ..+++...  ..||+...  .+..|++|.|||.+.
T Consensus        11 ~~~~valyd~~s~~~~dLsf~~Gd~~~~~~~~~~--~~Ww~ar~~~~~~~g~ip~N~v~~~   69 (468)
T KOG0197|consen   11 ETIVVALYDYASRTPEDLSFRKGDVVLILLETTN--GDWWRARSLQLGQEGYIPSNYVARN   69 (468)
T ss_pred             cceEEEeccccCCCccccccccCceEEEeeccCC--hhHHHHHHhhcCCCCcCcCceeecc
Confidence            4568999999999999999999999 66665544  57998765  478899999999975

>KOG0609|consensus

Probab=95.96  E-value=0.0061  Score=58.52  Aligned_cols=58  Identities=21%  Similarity=0.422  Sum_probs=47.5

Q ss_pred             eeeeeeeccCCCCCC-------CCCccCCCcEEEEeeeeCCcCCeEEEEeC-----Ceeeeeeccchhhhhh
Q psy3210         195 QIIAVAEFDFCPTEA-------NQLPLKQGCQVIVLSKEGEQKGWWKGKID-----ERVSYFFQLYWGNFRL  254 (272)
Q Consensus       195 ~~~~~alydf~~~~~-------~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-----g~~G~fP~~yVeE~~~  254 (272)
                      ..+++|+|||++++.       .-|+|.+||++.|+++.+  ..||.+...     +..|++|+...+|-+.
T Consensus       214 ~~~vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD--~nWWQA~~~~~~~~~~AGLiPS~~~qerr~  283 (542)
T KOG0609|consen  214 VVFVRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDD--PNWWQARRVGDPFGGLAGLIPSKELQERRV  283 (542)
T ss_pred             eeeehhhcCcCcccCCcccchhcCCcccccceeeeccCCC--cchhhhhcccCccccccccccCHHHHHHHH
Confidence            367899999999873       468999999999999988  789998765     3568999988876543

>smart00109 C1 Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)

Probab=95.82  E-value=0.004  Score=40.20  Aligned_cols=27  Identities=22%  Similarity=0.450  Sum_probs=21.7

Q ss_pred             hhcccCCCceecCcCCcchhcccccCCC
Q psy3210          15 TLKSRGLRPLCSQACYLACHKQCIPHTG   42 (272)
Q Consensus        15 ~~~g~~~qg~~c~~c~~~~h~~c~~~~~   42 (272)
                      ++.|.+ |||.|..|++.+|++|...++
T Consensus        20 ~i~~~~-~~~~C~~C~~~~H~~C~~~v~   46 (49)
T smart00109       20 SIWGSF-QGLRCSWCKVKCHKKCAEKVP   46 (49)
T ss_pred             ccCcCC-CCcCCCCCCchHHHHHHhhcC
Confidence            345555 899999999999999966544

Some bind phorbol esters and diacylglycerol. Some bind RasGTP. Zinc-binding domains.

>KOG4236|consensus

Probab=95.57  E-value=0.023  Score=55.03  Aligned_cols=32  Identities=25%  Similarity=0.406  Sum_probs=29.3

Q ss_pred             hhcccCCCceecCcCCcchhccc-ccCCCCCCC
Q psy3210          15 TLKSRGLRPLCSQACYLACHKQC-IPHTGRCGT   46 (272)
Q Consensus        15 ~~~g~~~qg~~c~~c~~~~h~~c-~~~~~~C~~   46 (272)
                      +|=||..||..|..||..-||.| .+.+.+|.+
T Consensus       165 mL~GLvrQGlKC~gCglNyHKRCa~kipNNCsG  197 (888)
T KOG4236|consen  165 MLFGLVRQGLKCEGCGLNYHKRCAFKIPNNCSG  197 (888)
T ss_pred             HHHHHHHccccccCCCCcHhhhhhhcCCCCCCc
Confidence            46799999999999999999999 888999965

>KOG3775|consensus

Probab=94.70  E-value=0.014  Score=53.70  Aligned_cols=57  Identities=23%  Similarity=0.307  Sum_probs=46.1

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE~~~  254 (272)
                      .+-++++.|-+.-+|||.|..||-|.|-.+.+  .-|++|..-  |+.|+||+.|+-|+..
T Consensus       263 ~THR~~~rFvPRHpDELeLEIgDav~Ve~ead--D~W~~G~NlRTG~~GIFPA~ya~evd~  321 (482)
T KOG3775|consen  263 QTHRAVFRFVPRHPDELELEIGDAVLVEAEAD--DFWFEGFNLRTGERGIFPAFYAHEVDG  321 (482)
T ss_pred             hhhhhhhhccCCCcceeeeecCCeeEeeeccc--chhhccccccccccccccceeEEecCC
Confidence            45678999999999999999999987775554  457788763  8999999999876543

>KOG0696|consensus

Probab=92.92  E-value=0.033  Score=52.54  Aligned_cols=33  Identities=21%  Similarity=0.375  Sum_probs=30.0

Q ss_pred             ehhcccCCCceecCcCCcchhccc-ccCCCCCCC
Q psy3210          14 VTLKSRGLRPLCSQACYLACHKQC-IPHTGRCGT   46 (272)
Q Consensus        14 ~~~~g~~~qg~~c~~c~~~~h~~c-~~~~~~C~~   46 (272)
                      -||-|+..||..|..|...||+.| ..+++-|+.
T Consensus       129 sLLyGl~HQGmKC~~C~mNVH~rCv~nVPslCG~  162 (683)
T KOG0696|consen  129 SLLYGLIHQGMKCDTCDMNVHHRCVENVPSLCGT  162 (683)
T ss_pred             HHHHHHHhcccccccccchHHHHHhhcCCcccCC
Confidence            378999999999999999999999 777888985

>KOG0192|consensus

Probab=92.84  E-value=0.035  Score=51.87  Aligned_cols=21  Identities=24%  Similarity=0.129  Sum_probs=19.7

Q ss_pred             cchhhhhhhccCCCCCcccce
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .|.+|+.+|.+++|||||+|.
T Consensus        85 ~f~~E~~il~~l~HpNIV~f~  105 (362)
T KOG0192|consen   85 AFRREASLLSRLRHPNIVQFY  105 (362)
T ss_pred             HHHHHHHHHHhCCCCCeeeEE
Confidence            799999999999999999974

>KOG0196|consensus

Probab=91.66  E-value=0.079  Score=53.54  Aligned_cols=46  Identities=17%  Similarity=0.256  Sum_probs=32.5

Q ss_pred             EEEEeeeeCCcCCeEEEEeC--C-----------eeeee---eccchhhhhhhccCCCCCcccce
Q psy3210         219 QVIVLSKEGEQKGWWKGKID--E-----------RVSYF---FQLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       219 ~i~v~~k~ge~~gwW~G~~~--g-----------~~G~f---P~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .|+..++|||   .+.|+.+  |           +.|+.   -.+|+.||.||-++.||||+||-
T Consensus       635 ~VIGaGEFGE---Vc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLE  696 (996)
T KOG0196|consen  635 KVIGAGEFGE---VCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLE  696 (996)
T ss_pred             EEEecccccc---eecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEE
Confidence            3445567886   4566554  2           22332   35899999999999999999984

>KOG0199|consensus

Probab=91.23  E-value=0.18  Score=50.64  Aligned_cols=52  Identities=25%  Similarity=0.341  Sum_probs=41.2

Q ss_pred             eeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchh
Q psy3210         198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWG  250 (272)
Q Consensus       198 ~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVe  250 (272)
                      +.|.-+++..+.+.|.|.+||.|.|++..++ .-||+|+..  ++.|.||.+-|.
T Consensus       377 ~~a~~~~d~~ep~aLh~~kgD~IvVIegs~a-~y~WfgQn~Rn~kvG~Fprsvvt  430 (1039)
T KOG0199|consen  377 AVARETYDSIEPGALHLTKGDEIVVIEGSGA-GYDWFGQNKRNQKVGTFPRSVVT  430 (1039)
T ss_pred             ceeeeeccccCCCceeeccCCeEEEEecCCc-cceeeccccccceecccCcceee
Confidence            4455566667899999999999999976664 359999754  789999998776

>KOG1856|consensus

Probab=91.18  E-value=0.2  Score=52.26  Aligned_cols=82  Identities=20%  Similarity=0.317  Sum_probs=59.8

Q ss_pred             cccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeC-CeeeEEEEEEecCC----CcceEEeeccc
Q psy3210          87 EYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTD-EKVKHMKVYEKEMD----GVPQYFLSQSR  161 (272)
Q Consensus        87 ~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~-~~v~H~~I~~~~~g----~~~~~~i~~~~  161 (272)
                      .+|.|+ +++-++||..|.....|.++||.|+++     ....+++++.. +.-.|+.|...+..    -|..+.+.+. 
T Consensus      1107 ~HP~F~-n~n~eQAe~yL~~~d~ge~iiRpSSrg-----ddhLvvtwKVsD~iYqhidV~E~eKEn~fslg~~l~i~~e- 1179 (1299)
T KOG1856|consen 1107 AHPLFK-NLNAEQAEAYLSDMDQGELIIRPSSRG-----DDHLVVTWKVSDGIYQHIDVQELEKENYFSLGKTLWIGGE- 1179 (1299)
T ss_pred             cCcccc-CCCHHHHHHHHHhcccccEEeccccCC-----CCceEEEEEecCchhhhhhhhhhhccccccccceEEECCc-
Confidence            457777 899999999999988899999999754     46677788775 55668888764321    0113334443 


Q ss_pred             ccchhhhhhhhhhc
Q psy3210         162 YFRSIVELICCYER  175 (272)
Q Consensus       162 ~F~sL~eLV~~y~~  175 (272)
                      .|..|.|+|.-|-.
T Consensus      1180 ~feDLDEiI~r~vq 1193 (1299)
T KOG1856|consen 1180 EFEDLDEIIARYVQ 1193 (1299)
T ss_pred             ccccHHHHHHHHHH
Confidence            69999999998854

>KOG0615|consensus

Probab=90.96  E-value=0.088  Score=49.54  Aligned_cols=23  Identities=17%  Similarity=0.052  Sum_probs=19.2

Q ss_pred             eccc-hhhhhhhccCCCCCcccce
Q psy3210         245 FQLY-WGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       245 P~~y-VeE~~~mk~l~h~~~v~~~  267 (272)
                      +... ..|++|||+|+||||||++
T Consensus       219 ~~~~v~~EieILkkL~HP~IV~~~  242 (475)
T KOG0615|consen  219 KTRDVQNEIEILKKLSHPNIVRIK  242 (475)
T ss_pred             chhhhHHHHHHHHhcCCCCEEEEe
Confidence            3344 4699999999999999997

>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=90.69  E-value=0.49  Score=31.14  Aligned_cols=36  Identities=28%  Similarity=0.577  Sum_probs=28.6

Q ss_pred             cCCCcEEEEeeeeCCcCCeEEE-EeCCeeeeeeccchh
Q psy3210         214 LKQGCQVIVLSKEGEQKGWWKG-KIDERVSYFFQLYWG  250 (272)
Q Consensus       214 l~~Gd~i~v~~k~ge~~gwW~G-~~~g~~G~fP~~yVe  250 (272)
                      +..|+.|+++++.++ .+|++- ..+|..||+.++||+
T Consensus        19 l~~g~~v~v~~~~~~-~~W~~V~~~~g~~GwV~~~~l~   55 (55)
T PF08239_consen   19 LPKGEKVTVLGESGD-GNWYKVRTYDGKTGWVSSSYLS   55 (55)
T ss_dssp             EETTSEEEEEEEETT---EEEEEEETTEEEEEEGGCEE
T ss_pred             EeCCCEEEEEEEcCC-cEEEEEECcCCcEEEEEccccC
Confidence            567999999988763 239888 667899999999984

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.

>KOG0040|consensus

Probab=90.61  E-value=0.0092  Score=63.15  Aligned_cols=67  Identities=19%  Similarity=0.335  Sum_probs=53.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhhccCCCCCccc
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLLSSLFIVPPVR  265 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~mk~l~h~~~v~  265 (272)
                      ..+.|+|||....+.|.+.++||+.+.+....  ..||+.+++.+.|++|+.||+-+..- .-.-+|+++
T Consensus       969 ~~v~alyd~q~kSprev~mKkgDvltll~s~n--kdwwkve~~d~qg~vpa~yvk~~~~~-~~~~~~l~~ 1035 (2399)
T KOG0040|consen  969 ECVLALYDYQEKSPREVTMKKGDVLTLLNSIN--KDWWKVEVNDRQGFVPAAYVKRLDPG-SASQPNLRR 1035 (2399)
T ss_pred             HHHHHHHHHHhcCHHHHHHhhhhHHHHHhhcc--cccccchhhhhcCcchHHHHHHhccC-CcchHHHHH
Confidence            34679999999999999999999987776555  78999999999999999999855433 444444444

>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A

Probab=89.11  E-value=0.44  Score=41.39  Aligned_cols=82  Identities=17%  Similarity=0.248  Sum_probs=52.0

Q ss_pred             CcccccEeeeeCCHHHHHHhccc----CCC-ceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEE--EEEEecCCCcceEE
Q psy3210          84 NLSEYLWFVGEMGREKATSLLER----EAD-GTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM--KVYEKEMDGVPQYF  156 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~----~~~-G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~--~I~~~~~g~~~~~~  156 (272)
                      ++..+..|.. -+++++|+.|..    ++. -.|.+-.+.     ..+|.|.|++..+...+|.  .|.-..+|    |.
T Consensus       131 ~~~~h~kf~~-g~~~e~e~~L~~~k~~nP~~i~Y~f~~~~-----~~PG~F~L~y~~~~~~~~~~~~v~V~p~G----f~  200 (220)
T PF14633_consen  131 EMMNHRKFKD-GTKEEVEEWLKEEKKANPKRIPYAFCISK-----EHPGYFILSYKPNKNPRHEYWPVKVTPDG----FR  200 (220)
T ss_dssp             HHHCSTTEES-S-CCCCHHHHHCHHHHSTTS-EEEEEE-T-----TSTTEEEEEEESSTTS-EEEEEEEE-SSS----EE
T ss_pred             HHHhCccccC-CCHHHHHHHHHHHHHhCCCCceEEEEECC-----CCCCEEEEEEEcCCCCceEEeeEEEecCc----EE
Confidence            3444455543 356677887853    233 356666664     3579999999886544443  37666665    77


Q ss_pred             eecccccchhhhhhhhhhcc
Q psy3210         157 LSQSRYFRSIVELICCYERN  176 (272)
Q Consensus       157 i~~~~~F~sL~eLV~~y~~~  176 (272)
                      +... .|++|.+|+.+++.+
T Consensus       201 ~r~~-~f~~~~~L~~~FK~~  219 (220)
T PF14633_consen  201 FRKQ-VFPSLDRLINWFKKH  219 (220)
T ss_dssp             ETTE-EESSHHHHHHHHHHH
T ss_pred             Eecc-cCCCHHHHHHHHhhc
Confidence            7654 699999999999864

>KOG0585|consensus

Probab=86.78  E-value=0.26  Score=47.36  Aligned_cols=20  Identities=20%  Similarity=0.170  Sum_probs=17.7

Q ss_pred             chhhhhhhccCCCCCcccce
Q psy3210         248 YWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       248 yVeE~~~mk~l~h~~~v~~~  267 (272)
                      -.+|+.|||+|+|||||+|-
T Consensus       155 v~~EIailKkl~H~nVV~Li  174 (576)
T KOG0585|consen  155 VRREIAILKKLHHPNVVKLI  174 (576)
T ss_pred             HHHHHHHHHhcCCcCeeEEE
Confidence            45799999999999999983

>KOG0199|consensus

Probab=86.30  E-value=0.18  Score=50.67  Aligned_cols=22  Identities=14%  Similarity=0.025  Sum_probs=20.7

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .+|+.|+.+|.+|.|+|||||+
T Consensus       156 ddflrEas~M~~L~H~hliRLy  177 (1039)
T KOG0199|consen  156 DDFLREASHMLKLQHPHLIRLY  177 (1039)
T ss_pred             HHHHHHHHHHHhccCcceeEEe
Confidence            5799999999999999999996

>KOG0694|consensus

Probab=86.27  E-value=0.15  Score=50.69  Aligned_cols=38  Identities=18%  Similarity=0.261  Sum_probs=33.1

Q ss_pred             cchheehhcccCCCceecCcCCcchhccc-ccCCCCCCC
Q psy3210           9 RSISIVTLKSRGLRPLCSQACYLACHKQC-IPHTGRCGT   46 (272)
Q Consensus         9 ~~~~~~~~~g~~~qg~~c~~c~~~~h~~c-~~~~~~C~~   46 (272)
                      .|.-..++-||.+|||.|..|-..+||.| .+++..|-.
T Consensus       172 Cs~C~kFi~gL~kqGyQCqvC~~vvHKkCh~kvv~~C~~  210 (694)
T KOG0694|consen  172 CSWCQKFIWGLRKQGYQCQVCWRVVHKKCHVKVVTLCDF  210 (694)
T ss_pred             hhhhhhheeccCCCceEEeeeeehHhhhhHHHHHHhccC
Confidence            34556789999999999999999999999 888888865

>KOG1090|consensus

Probab=85.77  E-value=0.32  Score=50.32  Aligned_cols=26  Identities=15%  Similarity=0.409  Sum_probs=23.2

Q ss_pred             CCceecCcCCcchhcccccCCCCCCC
Q psy3210          21 LRPLCSQACYLACHKQCIPHTGRCGT   46 (272)
Q Consensus        21 ~qg~~c~~c~~~~h~~c~~~~~~C~~   46 (272)
                      .|||+|++||+++|.+|-++.-.|+.
T Consensus      1559 pv~~~c~~c~~~~he~c~~~~~~~~~ 1584 (1732)
T KOG1090|consen 1559 PVSVHCKKCRIHVHEGCVNRNITIGN 1584 (1732)
T ss_pred             cceecccccccccchhhccccccccc
Confidence            89999999999999999887777764

>PF03107 C1_2: C1 domain; InterPro: IPR004146 This short domain is rich in cysteines and histidines

Probab=85.59  E-value=0.39  Score=27.98  Aligned_cols=16  Identities=19%  Similarity=0.496  Sum_probs=15.0

Q ss_pred             ceecCcCCcchhcccc
Q psy3210          23 PLCSQACYLACHKQCI   38 (272)
Q Consensus        23 g~~c~~c~~~~h~~c~   38 (272)
                      +|.|+.|...+|.+|+
T Consensus        15 ~Y~C~~c~f~lh~~Ca   30 (30)
T PF03107_consen   15 FYHCSECCFTLHVRCA   30 (30)
T ss_pred             eEEeCCCCCeEcCccC
Confidence            9999999999999984

The pattern of conservation is similar to that found in DAG_PE-bind (IPR002219 from INTERPRO), therefore we have termed this domain DC1 for divergent C1 domain. This domain probably also binds to two zinc ions. The function of proteins with this domain is uncertain, however this domain may bind to molecules such as diacylglycerol. This family are found in plant proteins.

>KOG0600|consensus

Probab=84.71  E-value=0.35  Score=46.71  Aligned_cols=25  Identities=16%  Similarity=0.056  Sum_probs=22.4

Q ss_pred             eeeccchhhhhhhccCCCCCcccce
Q psy3210         243 YFFQLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       243 ~fP~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      -||..-++|++||++|.|||||+|.
T Consensus       158 ~~~~t~~REI~ILr~l~HpNIikL~  182 (560)
T KOG0600|consen  158 GFPITAIREIKILRRLDHPNIIKLE  182 (560)
T ss_pred             cchHHHHHHHHHHHhcCCCccccee
Confidence            3677888999999999999999985

>smart00287 SH3b Bacterial SH3 domain homologues

Probab=84.43  E-value=1.6  Score=29.31  Aligned_cols=36  Identities=28%  Similarity=0.369  Sum_probs=28.8

Q ss_pred             ccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchh
Q psy3210         213 PLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWG  250 (272)
Q Consensus       213 sl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVe  250 (272)
                      .+..|+.+.++++.+  .+|.+-+.. |..||++..++.
T Consensus        26 ~l~~g~~v~i~~~~~--~~W~~v~~~~g~~Gwi~~~~~~   62 (63)
T smart00287       26 TLKKGDKVKVLGVDG--QDWAKITYGSGQRGYVPGYVVN   62 (63)
T ss_pred             EecCCCEEEEEEccC--CceEEEEcCCCCEEEEEeeeec
Confidence            366899999997665  379998886 899999887764

>KOG0663|consensus

Probab=83.78  E-value=0.43  Score=44.06  Aligned_cols=23  Identities=13%  Similarity=-0.039  Sum_probs=21.9

Q ss_pred             eeccchhhhhhhccCCCCCcccc
Q psy3210         244 FFQLYWGNFRLLSSLFIVPPVRL  266 (272)
Q Consensus       244 fP~~yVeE~~~mk~l~h~~~v~~  266 (272)
                      ||-.+++|++++.+++|+|||.+
T Consensus       118 FPItsLREIniLl~~~H~NIV~v  140 (419)
T KOG0663|consen  118 FPITSLREINILLKARHPNIVEV  140 (419)
T ss_pred             CcchhHHHHHHHHhcCCCCeeee
Confidence            79999999999999999999986

>KOG1856|consensus

Probab=83.61  E-value=2.4  Score=44.73  Aligned_cols=81  Identities=16%  Similarity=0.208  Sum_probs=59.4

Q ss_pred             ccccEeeeeCCHHHHHHhccc--CCCceEE---EEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc
Q psy3210          86 SEYLWFVGEMGREKATSLLER--EADGTYL---LRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS  160 (272)
Q Consensus        86 ~~~~Wf~g~isR~~Ae~lL~~--~~~G~FL---VR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~  160 (272)
                      ..+.+|. .=++++.|++|..  ..++.+.   +-.|.     .+||.|.||++.+.+++|--|.-...|    |++.+.
T Consensus      1203 ~nhkyf~-~Gt~~~~ek~L~~~k~~np~~~~Y~F~~s~-----~~PG~F~L~y~~~~k~~heyv~v~p~g----~~~rg~ 1272 (1299)
T KOG1856|consen 1203 TNHKYFF-TGTKKEVEKLLRDYKKVNPKKSVYFFCASH-----EHPGKFCLSYKPSSKPRHEYVKVVPEG----FRFRGQ 1272 (1299)
T ss_pred             HhhhHhh-cCCHHHHHHHHHHHhccCCCeeeEEEEecc-----cCCceEEEEeccCCCccceeEEEcccc----eEEecc
Confidence            3444555 2348889999963  3344444   44553     568999999999999999888877775    666655


Q ss_pred             cccchhhhhhhhhhccc
Q psy3210         161 RYFRSIVELICCYERNS  177 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~  177 (272)
                       .|+||.+|+.|++.+-
T Consensus      1273 -~f~tld~L~~~FK~h~ 1288 (1299)
T KOG1856|consen 1273 -NFGTLDELCRWFKRHY 1288 (1299)
T ss_pred             -cchhHHHHHHHHHHHh
Confidence             5999999999998865

>KOG0658|consensus

Probab=83.57  E-value=0.49  Score=43.78  Aligned_cols=20  Identities=20%  Similarity=0.205  Sum_probs=18.1

Q ss_pred             hhhhhhccCCCCCcccceec
Q psy3210         250 GNFRLLSSLFIVPPVRLSWS  269 (272)
Q Consensus       250 eE~~~mk~l~h~~~v~~~~~  269 (272)
                      .|+++|+++.|||||+|-+.
T Consensus        66 rEl~im~~l~HpNIV~L~~~   85 (364)
T KOG0658|consen   66 RELQIMRKLDHPNIVRLLYF   85 (364)
T ss_pred             HHHHHHHhcCCcCeeeEEEE
Confidence            59999999999999999764

>KOG1095|consensus

Probab=82.34  E-value=0.49  Score=49.62  Aligned_cols=22  Identities=18%  Similarity=0.009  Sum_probs=20.2

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      ..|++|+.+|++++|||||+|-
T Consensus       740 ~~Fl~Ea~~m~~f~HpNiv~li  761 (1025)
T KOG1095|consen  740 SDFLKEALLMSKFDHPNIVSLI  761 (1025)
T ss_pred             HHHHHHHHHHhcCCCcceeeEE
Confidence            4799999999999999999973

>PF13831 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A

Probab=81.98  E-value=0.44  Score=29.13  Aligned_cols=18  Identities=28%  Similarity=0.571  Sum_probs=11.8

Q ss_pred             ceecCcCCcchhcccccC
Q psy3210          23 PLCSQACYLACHKQCIPH   40 (272)
Q Consensus        23 g~~c~~c~~~~h~~c~~~   40 (272)
                      =..|..|++.||+.|-++
T Consensus         4 ll~C~~C~v~VH~~CYGv   21 (36)
T PF13831_consen    4 LLFCDNCNVAVHQSCYGV   21 (36)
T ss_dssp             EEE-SSS--EEEHHHHT-
T ss_pred             eEEeCCCCCcCChhhCCc
Confidence            468999999999999544

>KOG3565|consensus

Probab=80.80  E-value=0.43  Score=47.84  Aligned_cols=56  Identities=16%  Similarity=0.313  Sum_probs=46.7

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE--eCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK--IDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~--~~g~~G~fP~~yVeE~  252 (272)
                      ..+.|+|.|++...+++++..|+++.++...- +.||=+++  .++..|.+|..|++-.
T Consensus       579 ~~~~a~~~~~~~s~~~~si~~~~il~~ie~~~-g~gwt~~r~~~~~~~g~~Ptsyl~~~  636 (640)
T KOG3565|consen  579 RTSKALYAFEGQSEGTISIDPGEILQVIEEDK-GDGWTRGRLEPNGEKGYVPTSYLDVT  636 (640)
T ss_pred             cceecccCcCCCCCCccccCcchhHHHHhhcc-cCCCCCCCCCCCCcCCCCCccccccc
Confidence            45789999999999999999999988885432 27898888  6689999999999843

>KOG4257|consensus

Probab=80.35  E-value=0.6  Score=46.51  Aligned_cols=22  Identities=5%  Similarity=0.086  Sum_probs=20.2

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .+|++|+-+|+++.|||||||-
T Consensus       436 ekflqEa~iMrnfdHphIikLI  457 (974)
T KOG4257|consen  436 EKFLQEASIMRNFDHPHIIKLI  457 (974)
T ss_pred             HHHHHHHHHHHhCCCcchhhee
Confidence            4799999999999999999983

>KOG3705|consensus

Probab=80.10  E-value=1.1  Score=42.03  Aligned_cols=88  Identities=17%  Similarity=0.087  Sum_probs=52.8

Q ss_pred             ccchhhhhhhhhhcccc----cccccccccccccc-ceeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE
Q psy3210         162 YFRSIVELICCYERNSL----IENFIGLNVRLQLP-FRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK  236 (272)
Q Consensus       162 ~F~sL~eLV~~y~~~~L----~~~~~~l~~~L~~P-~~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~  236 (272)
                      +|.|-+.-|.|--...+    ...|..|+..--+- .....++++++-.++..+|+.++.||+|-|.+.-  +.|.-+|.
T Consensus       471 TFSSQVCRvaYEimQt~~pDa~~~FhSLDDIYYfGGQnAHn~ivi~aH~prt~~ei~l~vGD~vgvAGNH--WdGySKG~  548 (580)
T KOG3705|consen  471 TFSSQVCRVAYEIMQTSGPDAGSKFHSLDDIYYFGGQNAHNVIVIEAHIPRTNKEIDLKVGDKVGVAGNH--WDGYSKGT  548 (580)
T ss_pred             echHHHHHHHHHHHhccCCCcccccccccceeeecCccccceEEEEecCCCcccccCcccCCeeeecccc--cccccccc
Confidence            58887777766432221    12233333211111 1223467889999999999999999998776432  13444555


Q ss_pred             eC--Ceeeeeeccchhh
Q psy3210         237 ID--ERVSYFFQLYWGN  251 (272)
Q Consensus       237 ~~--g~~G~fP~~yVeE  251 (272)
                      ..  ++.|+||+-=|+|
T Consensus       549 Nr~t~~~GlfPSyKvre  565 (580)
T KOG3705|consen  549 NRQTYKEGLFPSYKVRE  565 (580)
T ss_pred             cccccccCCCccceeee
Confidence            43  6899999855554

>KOG1011|consensus

Probab=80.10  E-value=0.31  Score=48.26  Aligned_cols=30  Identities=20%  Similarity=0.382  Sum_probs=25.3

Q ss_pred             hhcccCCCceecCcCCcchhccc-ccCCCCC
Q psy3210          15 TLKSRGLRPLCSQACYLACHKQC-IPHTGRC   44 (272)
Q Consensus        15 ~~~g~~~qg~~c~~c~~~~h~~c-~~~~~~C   44 (272)
                      ||=|+..||.+|.-|+..||.+| -...+.|
T Consensus       192 llwglarqglrctqc~vk~hdkc~ell~adc  222 (1283)
T KOG1011|consen  192 LLWGLARQGLRCTQCQVKVHDKCRELLSADC  222 (1283)
T ss_pred             HHHHHhhcccchhhccccHHHHHHHHhhhHH
Confidence            68899999999999999999999 3334555

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	272
2crh_A	138	Solution Structure Of The Sh2 Domain Of Human Proto		7e-14
2lct_A	107	Solution Structure Of The Vav1 Sh2 Domain Complexed		1e-13
2lnw_A	122	Identification And Structural Basis For A Novel Int		1e-12
2dlz_A	118	Solution Structure Of The Sh2 Domain Of Human Prote		2e-12
1gri_A	217	Grb2 Length = 217		3e-08
1oo3_A	111	P395s Mutant Of The P85 Regulatory Subunit Of The N		9e-07
1h9o_A	112	Phosphatidylinositol 3-Kinase, P85-Alpha Subunit: C		1e-06
1qad_A	111	Crystal Structure Of The C-Terminal Sh2 Domain Of T		2e-06
1bfi_A	112	Solution Structure Of The C-Terminal Sh2 Domain Of		3e-06
1fu5_A	111	Nmr Structure Of The N-Sh2 Domain Of The P85 Subuni		5e-06
2pna_A	104	Structure Of An Sh2 Domain Of The P85 Alpha Subunit		1e-05
2iug_A	120	Crystal Structure Of The Pi3-Kinase P85 N-Terminal		2e-05
2eob_A	124	Solution Structure Of The Second Sh2 Domain From Ra		4e-05
3hhm_B	373	Crystal Structure Of P110alpha H1047r Mutant In Com		9e-05
2y3a_B	302	Crystal Structure Of P110beta In Complex With Icsh2		1e-04
2rd0_B	279	Structure Of A Human P110alpha/p85alpha Complex Len		1e-04
4ey0_A	246	Structure Of Tandem Sh2 Domains From Plcgamma1 Leng		6e-04

>pdb|2CRH|A Chain A, Solution Structure Of The Sh2 Domain Of Human Proto- Oncogene Protein Vav1 Length = 138

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
           ++LS +LW+ G M R  A S+L   +DGT+L+R R +         +A+S+K + +VKH+
Sbjct: 21  QDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAE-----FAISIKYNVEVKHI 75
Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
           K+    M     Y +++ + FR + EL+  Y++NSL + F  L+  LQ PF++
Sbjct: 76  KI----MTAEGLYRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKE 124

>pdb|2LCT|A Chain A, Solution Structure Of The Vav1 Sh2 Domain Complexed With A Syk-Derived Doubly Phosphorylated Peptide Length = 107

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
           ++LS +LW+ G M R  A S+L   +DGT+L+R R +         +A+S+K + +VKH+
Sbjct: 4   QDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAE-----FAISIKYNVEVKHI 58
Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
           K+    M     Y +++ + FR + EL+  Y++NSL + F  L+  LQ PF++
Sbjct: 59  KI----MTAEGLYRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKE 107

>pdb|2LNW|A Chain A, Identification And Structural Basis For A Novel Interaction Between Vav2 And Arap3 Length = 122

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 68/111 (61%), Gaps = 9/111 (8%)
Query: 84  NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMK 143
           + + Y WF G M R++  +LL+  A GTYL+R RP          +A+S+K +++VKH+K
Sbjct: 18  DYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAER-----FAISIKFNDEVKHIK 72
Query: 144 VYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR 194
           V EK+        +++++ F S++EL+  Y+ +SL E+F  L+  L+ P++
Sbjct: 73  VVEKD----NWIHITEAKKFDSLLELVEYYQCHSLKESFKQLDTTLKYPYK 119

>pdb|2DLZ|A Chain A, Solution Structure Of The Sh2 Domain Of Human Protein Vav-2 Length = 118

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 84  NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMK 143
           + + Y WF G M R++  +LL+  A GTYL+R RP          +A+S+K +++VKH+K
Sbjct: 12  DYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAER-----FAISIKFNDEVKHIK 66
Query: 144 VYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF 193
           V EK+        +++++ F S++EL+  Y+ +SL E+F  L+  L+ P+
Sbjct: 67  VVEKD----NWIHITEAKKFDSLLELVEYYQCHSLKESFKQLDTTLKYPY 112

>pdb|1GRI|A Chain A, Grb2 Length = 217

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 90  WFVGEMGREKATSLLERE-ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           WF G++ R KA  +L ++  DG +L+R     P       ++LS+K    V+H KV    
Sbjct: 60  WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGD-----FSLSVKFGNDVQHFKVLR-- 112
Query: 149 MDGVPQYFLSQSRYFRSIVELICCYERNSLIENF-IGLNVRLQLPFRQIIAVAEFDFCPT 207
            DG  +YFL   + F S+ EL+  +   S+  N  I L    Q+P +     A FDF P 
Sbjct: 113 -DGAGKYFLWVVK-FNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQ 170
Query: 208 EANQLPLKQGCQVIVLS 224
           E  +L  ++G  + V+ 
Sbjct: 171 EDGELGFRRGDFIHVMD 187

>pdb|1OO3|A Chain A, P395s Mutant Of The P85 Regulatory Subunit Of The N- Terminal Src Homology 2 Domain Of Pi3-Kinase Length = 111

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 85  LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
           L +  W+ G++ RE+    L   ADGT+L+R       H +   Y L+L+     K +K+
Sbjct: 8   LQDAEWYWGDISREEVNEKLRDTADGTFLVR-DASTKMHGD---YTLTLRKGGNNKSIKI 63
Query: 145 YEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           + ++     +Y  S S  F S+VELI  Y   SL +    L+V+L  P
Sbjct: 64  FHRD----GKYGFSDSLTFNSVVELINHYRNESLAQYNPKLDVKLLYP 107

>pdb|1H9O|A Chain A, Phosphatidylinositol 3-Kinase, P85-Alpha Subunit: C-Terminal Sh2 Domain Complexed With A Tyr751 Phosphopeptide From The Pdgf Receptor, Crystal Structure At 1.79 A Length = 112

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 86  SEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVY 145
            E  W VG   R KA +LL  + DGT+L+R   +      +  YA S+  D +VKH  V 
Sbjct: 8   DEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSK------QGCYACSVVVDGEVKHC-VI 60
Query: 146 EKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            K   G    F      + S+ EL+  Y+  SL+++   LNV L  P
Sbjct: 61  NKTATGYG--FAEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYP 105

>pdb|1QAD|A Chain A, Crystal Structure Of The C-Terminal Sh2 Domain Of The P85 Alpha Regulatory Subunit Of Phosphoinositide 3-Kinase: An Sh2 Domain Mimicking Its Own Substrate Length = 111

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 86  SEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVY 145
            E  W VG   R KA +LL  + DGT+L+R   +      +  YA S+  D +VKH  V 
Sbjct: 7   DEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSK------QGCYACSVVVDGEVKHC-VI 59
Query: 146 EKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            K   G    F      + S+ EL+  Y+  SL+++   LNV L  P
Sbjct: 60  NKTATGYG--FAEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYP 104

>pdb|1BFI|A Chain A, Solution Structure Of The C-Terminal Sh2 Domain Of The P85alpha Regulatory Subunit Of Phosphoinositide 3-Kinase, Nmr, 30 Structures Length = 112

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 86  SEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVY 145
            E  W VG   R KA +LL  + DGT+L+R   +      +  YA S+  D +VKH  V 
Sbjct: 8   DEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSK------QGCYACSVVVDGEVKHC-VI 60
Query: 146 EKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            K   G    F      + S+ EL+  Y+  SL+++   LNV L  P
Sbjct: 61  NKTATGYG--FAEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYP 105

>pdb|1FU5|A Chain A, Nmr Structure Of The N-Sh2 Domain Of The P85 Subunit Of Pi3- Kinase Complexed To A Doubly Phosphorylated Peptide Derived From Polyomavirus Middle T Antigen Length = 111

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 85  LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
           L +  W+ G++ RE+    L   ADGT+L+R       H +   Y L+L+     K +K+
Sbjct: 8   LQDAEWYWGDISREEVNEKLRDTADGTFLVR-DASTKMHGD---YTLTLRKGGNNKSIKI 63
Query: 145 YEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           + +  DG  +Y  S    F S+VELI  Y   SL +    L+V+L  P
Sbjct: 64  FHR--DG--KYGFSDPLTFNSVVELINHYRNESLAQYNPKLDVKLLYP 107

>pdb|2PNA|A Chain A, Structure Of An Sh2 Domain Of The P85 Alpha Subunit Of Phosphatidylinositol-3-Oh Kinase Length = 104

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 85  LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
           L +  W+ G++ RE+    L   ADGT+L+R       H +   Y L+L+     K +K+
Sbjct: 1   LQDAEWYWGDISREEVNEKLRDTADGTFLVR-DASTKMHGD---YTLTLRKGGNNKLIKI 56
Query: 145 YEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           + +  DG  +Y  S    F S+VELI  Y   SL +    L+V+L  P
Sbjct: 57  FHR--DG--KYGFSDPLTFNSVVELINHYRNESLAQYNPKLDVKLLYP 100

>pdb|2IUG|A Chain A, Crystal Structure Of The Pi3-Kinase P85 N-Terminal Sh2 Domain Length = 120

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 90  WFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEM 149
           W+ G++ RE+    L   ADGT+L+R       H +   Y L+L+     K +K++ +  
Sbjct: 13  WYWGDISREEVNEKLRDTADGTFLVR-DASTKMHGD---YTLTLRKGGNNKLIKIFHR-- 66
Query: 150 DGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP---FRQIIAVAE 201
           DG  +Y  S    F S+VELI  Y   SL +    L+V+L  P   ++Q   V E
Sbjct: 67  DG--KYGFSDPLTFSSVVELINHYRNESLAQYNPKLDVKLLYPVSKYQQDQVVKE 119

>pdb|2EOB|A Chain A, Solution Structure Of The Second Sh2 Domain From Rat Plc Gamma-2 Length = 124

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 90  WFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           W+   + R +A  +L R   DG +L+R R           YA++ +   KVKH ++    
Sbjct: 21  WYYDRLSRGEAEDMLMRIPRDGAFLIRKRE------GTDSYAITFRARGKVKHCRI---N 71
Query: 149 MDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            DG   + L  S YF S+VEL+  YE+++L        +RL+ P
Sbjct: 72  RDGR-HFVLGTSAYFESLVELVSYYEKHALYR-----KMRLRYP 109

>pdb|3HHM|B Chain B, Crystal Structure Of P110alpha H1047r Mutant In Complex With Nish2 Of P85alpha And The Drug Wortmannin Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 90  WFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEM 149
           W+ G++ RE+    L   ADGT+L+R       H +   Y L+L+     K +K++ +  
Sbjct: 12  WYWGDISREEVNEKLRDTADGTFLVR-DASTKMHGD---YTLTLRKGGNNKLIKIFHR-- 65
Query: 150 DGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP---FRQIIAVAE 201
           DG  +Y  S    F S+VELI  Y   SL +    L+V+L  P   ++Q   V E
Sbjct: 66  DG--KYGFSDPLTFSSVVELINHYRNESLAQYNPKLDVKLLYPVSKYQQDQVVKE 118

>pdb|2Y3A|B Chain B, Crystal Structure Of P110beta In Complex With Icsh2 Of P85beta And The Drug Gdc-0941 Length = 302

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 87  EYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYE 146
           E  W+VG++ R +A  +L  + DGT+L+R   Q         YA S+  D   KH  +Y 
Sbjct: 193 ERTWYVGKINRTQAEEMLSGKRDGTFLIRESSQ------RGCYACSVVVDGDTKHCVIY- 245
Query: 147 KEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR 194
           +   G    F      + S+ EL+  Y+  SL+++   L V L  P R
Sbjct: 246 RTATGFG--FAEPYNLYGSLKELVLHYQHASLVQHNDALTVTLAHPVR 291

>pdb|2RD0|B Chain B, Structure Of A Human P110alpha/p85alpha Complex Length = 279

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 85  LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
           L +  W+ G++ RE+    L   ADGT+L+R       H +   Y L+L+     K +K+
Sbjct: 7   LQDAEWYWGDISREEVNEKLRDTADGTFLVR-DASTKMHGD---YTLTLRKGGNNKLIKI 62
Query: 145 YEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           + +  DG  +Y  S    F S+VELI  Y   SL +    L+V+L  P
Sbjct: 63  FHR--DG--KYGFSDPLTFSSVVELINHYRNESLAQYNPKLDVKLLYP 106

>pdb|4EY0|A Chain A, Structure Of Tandem Sh2 Domains From Plcgamma1 Length = 246

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 21/120 (17%)
Query: 90  WFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           W+   + R +A  +L R   DG +L+R R +    PN   YA+S + + K+KH +V ++ 
Sbjct: 124 WYHASLTRAQAEHMLMRVPRDGAFLVRKRNE----PNS--YAISFRAEGKIKHCRVQQE- 176
Query: 149 MDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR----QIIAVAEFDF 204
                Q  +  +  F S+V+LI  YE++ L        ++L+ P      + I  AE DF
Sbjct: 177 ----GQTVMLGNSEFDSLVDLISYYEKHPLYR-----KMKLRYPINEEALEKIGTAEPDF 227

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	272
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	6e-29
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	6e-29
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	7e-29
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	4e-27
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	6e-25
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	2e-23
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	1e-14
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	3e-20
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	5e-20
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	9e-19
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	1e-18
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	2e-18
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	2e-18
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	2e-18
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	4e-18
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	4e-18
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	4e-08
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	6e-18
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	4e-04
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	7e-18
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	1e-17
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	1e-17
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	3e-17
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	3e-17
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	3e-17
3gqi_B	226	Phospholipase C-gamma-1; phosphorylated kinase, PY	3e-11
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	4e-17
2dly_A	121	FYN-related kinase; BRK family kinase, structural	5e-17
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	5e-17
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	6e-17
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	5e-14
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	1e-16
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	4e-04
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	2e-16
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	2e-16
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	2e-16
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	5e-16
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	2e-05
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	6e-16
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	8e-16
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	1e-15
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	2e-15
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	4e-15
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	4e-15
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	5e-15
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	6e-15
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	7e-15
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	8e-15
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	1e-14
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	2e-14
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	3e-13
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	4e-14
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	7e-14
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	8e-14
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	1e-13
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	1e-13
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	1e-13
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	2e-13
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-13
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	4e-13
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	4e-13
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	4e-13
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	4e-13
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	7e-13
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-12
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-12
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	3e-12
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	4e-12
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	5e-12
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	8e-10
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	5e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-08
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	1e-08
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	2e-08
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	5e-08
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	6e-08
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	1e-07
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	1e-07
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	1e-07
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	1e-07
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	1e-07
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	1e-07
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	2e-07
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	2e-07
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	2e-07
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	2e-07
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	3e-07
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	4e-07
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-07
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	4e-07
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	5e-07
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	5e-07
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	6e-07
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	6e-07
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	7e-07
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	8e-07
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	8e-07
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	9e-07
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	1e-06
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	1e-06
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	1e-06
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	1e-06
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	1e-06
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	1e-06
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	1e-06
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	1e-06
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	1e-06
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	2e-06
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	2e-06
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	2e-06
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	2e-06
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	2e-06
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	2e-06
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	2e-06
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	2e-06
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	2e-06
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	2e-06
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	2e-06
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	3e-06
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	3e-06
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	3e-06
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	3e-06
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	3e-06
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	3e-06
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	3e-06
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	3e-06
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	3e-06
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	4e-06
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	4e-06
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	4e-06
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	4e-06
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens} Length	4e-06
3u23_A	65	CD2-associated protein; structural genomics, struc	4e-06
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	5e-06
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	5e-06
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	5e-06
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	5e-06
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	5e-06
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	6e-06
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	7e-06
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	7e-06
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	7e-06
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	7e-06
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	7e-06
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	8e-06
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	9e-06
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	9e-06
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	1e-05
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	1e-05
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	1e-05
1awj_A	77	ITK; transferase, regulatory intramolecular comple	1e-05
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	1e-05
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	1e-05
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	1e-05
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	1e-05
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	2e-05
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	3e-04
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	2e-05
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	2e-05
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	2e-05
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	2e-05
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	2e-05
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	2e-05
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	2e-05
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	2e-05
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	2e-05
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	2e-05
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	2e-05
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	3e-05
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	3e-05
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	3e-05
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	3e-05
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	3e-05
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	3e-05
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	3e-05
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	3e-05
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	3e-05
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	3e-05
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	3e-05
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	3e-05
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	3e-05
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	3e-05
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	4e-05
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	4e-05
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	4e-05
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	4e-05
1i07_A	60	Epidermal growth factor receptor kinase substrate	4e-05
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	4e-05
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	5e-05
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	5e-05
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	5e-05
1wxb_A	68	Epidermal growth factor receptor pathway substrate	5e-05
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	5e-05
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	6e-05
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	6e-05
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	6e-05
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	6e-05
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	7e-05
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	7e-05
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	7e-05
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	9e-05
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	9e-05
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	1e-04
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	1e-04
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	1e-04
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	1e-04
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	1e-04
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	1e-04
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	1e-04
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	2e-04
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	2e-04
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	2e-04
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	2e-04
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	2e-04
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	2e-04
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	2e-04
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	2e-04
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	2e-04
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	2e-04
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	3e-04
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	3e-04
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	3e-04
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	4e-04
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	4e-04
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	4e-04
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	4e-04
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	4e-04
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	5e-04
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	5e-04

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score =  105 bits (264), Expect = 6e-29
 Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 9/116 (7%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV 139
           +   + + Y WF G M R++  +LL+  A GTYL+R RP          +A+S+K +++V
Sbjct: 8   SREIDYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERP---AEAER--FAISIKFNDEV 62

Query: 140 KHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
           KH+KV EK  D      +++++ F S++EL+  Y+ +SL E+F  L+  L+ P+  
Sbjct: 63  KHIKVVEK--DN--WIHITEAKKFDSLLELVEYYQCHSLKESFKQLDTTLKYPYSG 114

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A Length = 120

 Score =  105 bits (264), Expect = 6e-29
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 8/116 (6%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV 139
            ++ +L    W+ G++ RE+    L   ADGT+L+R      +      Y L+L+     
Sbjct: 3   NNNMSLQNAEWYWGDISREEVNEKLRDTADGTFLVRDA----STKMHGDYTLTLRKGGNN 58

Query: 140 KHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
           K +K++ +  DG  +Y  S    F S+VELI  Y   SL +    L+V+L  P  +
Sbjct: 59  KLIKIFHR--DG--KYGFSDPLTFSSVVELINHYRNESLAQYNPKLDVKLLYPVSK 110

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A* Length = 138

 Score =  105 bits (265), Expect = 7e-29
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 10/133 (7%)

Query: 64  GAAQPLGGNEWTAKSW-ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPT 122
           G++   G  E     W    ++LS +LW+ G M R  A S+L   +DGT+L+R R     
Sbjct: 1   GSSGSSGKAEAEQNWWEGPPQDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRV---K 57

Query: 123 HPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENF 182
              E  +A+S+K + +VKH+K+   E      Y +++ + FR + EL+  Y++NSL + F
Sbjct: 58  DAAE--FAISIKYNVEVKHIKIMTAE----GLYRITEKKAFRGLTELVEFYQQNSLKDCF 111

Query: 183 IGLNVRLQLPFRQ 195
             L+  LQ PF++
Sbjct: 112 KSLDTTLQFPFKE 124

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A Length = 112

 Score =  100 bits (252), Expect = 4e-27
 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 9/113 (7%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
            +  E  W VG   R KA +LL  + DGT+L+R      +      YA S+  D +VKH 
Sbjct: 5   PHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRES----SKQGC--YACSVVVDGEVKHC 58

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
            + +    G    F      + S+ EL+  Y+  SL+++   LNV L  P   
Sbjct: 59  VINKTA-TG--YGFAEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYPVYA 108

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 302

 Score =  100 bits (249), Expect = 6e-25
 Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 9/135 (6%)

Query: 61  DIAGAAQPLGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQG 120
           +  G            +      +  E  W+VG++ R +A  +L  + DGT+L+R     
Sbjct: 167 EWLGIKNETEDQYSLMEDEDALPHHEERTWYVGKINRTQAEEMLSGKRDGTFLIRES--- 223

Query: 121 PTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIE 180
            +      YA S+  D   KH  +Y     G    F      + S+ EL+  Y+  SL++
Sbjct: 224 -SQRGC--YACSVVVDGDTKHCVIYRTA-TG--FGFAEPYNLYGSLKELVLHYQHASLVQ 277

Query: 181 NFIGLNVRLQLPFRQ 195
           +   L V L  P R 
Sbjct: 278 HNDALTVTLAHPVRA 292

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 97.2 bits (241), Expect = 2e-23
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 8/116 (6%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV 139
            ++ +L    W+ G++ RE+    L   ADGT+L+R      +      Y L+L+     
Sbjct: 2   NNNMSLQNAEWYWGDISREEVNEKLRDTADGTFLVRDA----STKMHGDYTLTLRKGGNN 57

Query: 140 KHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
           K +K++ +  DG  +Y  S    F S+VELI  Y   SL +    L+V+L  P  +
Sbjct: 58  KLIKIFHR--DG--KYGFSDPLTFSSVVELINHYRNESLAQYNPKLDVKLLYPVSK 109

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A Length = 373

 Score = 71.8 bits (175), Expect = 1e-14
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 9/85 (10%)

Query: 85  LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
             E  W VG   R KA +LL  + DGT+L+R          +  YA S+  D +VKH  +
Sbjct: 298 HDEKTWNVGSSNRNKAENLLRGKRDGTFLVRES------SKQGCYACSVVVDGEVKHCVI 351

Query: 145 YEKEMDGVPQYFLSQSRYFRSIVEL 169
            +    G    F      + S+ EL
Sbjct: 352 NKTA-TG--YGFAEPYNLYSSLKEL 373

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus} Length = 124

 Score = 83.1 bits (206), Expect = 3e-20
 Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 16/111 (14%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKH 141
                  W+   + R +A  +L R   DG +L+R R    +      YA++ +   KVKH
Sbjct: 14  NPHESKPWYYDRLSRGEAEDMLMRIPRDGAFLIRKREGTDS------YAITFRARGKVKH 67

Query: 142 MKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            ++          + L  S YF S+VEL+  YE+++L        +RL+ P
Sbjct: 68  CRINRDGR----HFVLGTSAYFESLVELVSYYEKHAL-----YRKMRLRYP 109

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 81.9 bits (203), Expect = 5e-20
 Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 13/110 (11%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
            +L ++ W+ G + R  A  LL    +G++L+R      + P +   ++SL+ + +V H 
Sbjct: 11  NSLEKHSWYHGPVSRSAAEYLLSSLINGSFLVRES---ESSPGQ--LSISLRYEGRVYHY 65

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           ++     DG  + +++    F ++ EL+  +   +      GL   L  P
Sbjct: 66  RIN-TTADG--KVYVTAESRFSTLAELVHHHSTVAD-----GLVTTLHYP 107

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 81.9 bits (201), Expect = 9e-19
 Identities = 34/187 (18%), Positives = 63/187 (33%), Gaps = 29/187 (15%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV 139
            + ++     W+ G + R++A +LL+ +  G +L+R     P       Y LS+  + +V
Sbjct: 5   GNFDSEERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGD-----YVLSVSENSRV 59

Query: 140 KHMKVYEKE-------------MDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLN 186
            H  +                     P       + F S+  L+  Y+ + L    +   
Sbjct: 60  SHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEP 119

Query: 187 VRLQLPFR--------QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI- 237
           V                    A FDF   +   LP K+G  + +  K  E   WW  +  
Sbjct: 120 VSRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEE--QWWNAEDS 177

Query: 238 DERVSYF 244
           + +    
Sbjct: 178 EGKRGMI 184

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus} Length = 141

 Score = 79.1 bits (195), Expect = 1e-18
 Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 14/121 (11%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKH 141
             L    W+ G   R+ A   L R   DG++L+R       H ++  Y L    +++V +
Sbjct: 18  AELLGKPWYAGACDRKSAEEALHRSNKDGSFLIRKSS---GHDSKQPYTLVAFFNKRVYN 74

Query: 142 MKVYEKEMDGVPQYFLSQ----SRYFRSIVELICCYERNSLI----ENFIGLNVRLQLPF 193
           + V   E     QY L +      YF S+VE++  ++ N L+    +N    + RL+   
Sbjct: 75  IPVRFIEATK--QYALGKKKNGEEYFGSVVEIVNSHQHNPLVLIDSQNNTKDSTRLKYAV 132

Query: 194 R 194
           +
Sbjct: 133 K 133

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A Length = 109

 Score = 77.7 bits (192), Expect = 2e-18
 Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 11/114 (9%)

Query: 84  NLSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
           +++   WF   +   +A +LL     DG++L R      ++P +  + LS++ +  V H+
Sbjct: 3   HMTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSK---SNPGD--FTLSVRRNGAVTHI 57

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENF-IGLNVRLQLPFRQ 195
           K+          Y L     F ++ EL+  Y  +        G  + L+ P   
Sbjct: 58  KIQNTG----DYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNC 107

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens} Length = 125

 Score = 78.1 bits (193), Expect = 2e-18
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 21/120 (17%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDE---- 137
           +++  Y W+   M R +A  LL++E  +G +++R      +   +  Y +S+        
Sbjct: 6   DSIEMYEWYSKHMTRSQAEQLLKQEGKEGGFIVRDS----SKAGK--YTVSVFAKSTGDP 59

Query: 138 --KVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
              ++H  V         QY+L++   F +I ELI  ++ NS      GL  RL+ P  Q
Sbjct: 60  QGVIRHYVVCSTP-QS--QYYLAEKHLFSTIPELINYHQHNSA-----GLISRLKYPVSQ 111

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} PDB: 1jwo_A Length = 98

 Score = 76.8 bits (190), Expect = 2e-18
 Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 14/108 (12%)

Query: 85  LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
           LS   WF G++  ++A   L+   DG +L+R       HP +  Y L +     V H +V
Sbjct: 2   LSLMPWFHGKISGQEAVQQLQPPEDGLFLVRES---ARHPGD--YVLCVSFGRDVIHYRV 56

Query: 145 YEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
             +  DG     + ++ +F ++++++  Y ++        +  +L  P
Sbjct: 57  LHR--DG--HLTIDEAVFFCNLMDMVEHYSKDKG-----AICTKLVRP 95

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 110

 Score = 76.9 bits (190), Expect = 4e-18
 Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 21/118 (17%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDE---- 137
             L +Y WF G + R ++  LL ++  +G +++R      +      Y +SL +      
Sbjct: 6   SGLDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNS----SQVGM--YTVSLFSKAVNDK 59

Query: 138 --KVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF 193
              VKH  V+    +   + +L+++  F SI +LI  ++ NS      G+  RL+ P 
Sbjct: 60  KGTVKHYHVHTNA-EN--KLYLAENYCFDSIPKLIHYHQHNSA-----GMITRLRHPV 109

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 79.7 bits (196), Expect = 4e-18
 Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 13/172 (7%)

Query: 79  WADHENLSEYLWFVGEMGREKATSLLERE-ADGTYLLRIRPQGPTHPNETIYALSLKTDE 137
             ++  +  + WF G++ R KA  +L ++  DG +L+R     P       ++LS+K   
Sbjct: 49  PKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGD-----FSLSVKFGN 103

Query: 138 KVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQII 197
            V+H KV           +      F S+ EL+  +   S+  N       ++   +Q  
Sbjct: 104 DVQHFKVLRDG----AGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPT 159

Query: 198 -AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
              A FDF P E  +L  ++G  + V+        WWKG    +   F + Y
Sbjct: 160 YVQALFDFDPQEDGELGFRRGDFIHVMDNSDP--NWWKGACHGQTGMFPRNY 209

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 51.6 bits (123), Expect = 4e-08
 Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLY 248
           A+A++DF  T  ++L  K+G  + VL++E +Q  W+K +++ +  +  + Y
Sbjct: 3   AIAKYDFKATADDELSFKRGDILKVLNEECDQ-NWYKAELNGKDGFIPKNY 52

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 80.8 bits (198), Expect = 6e-18
 Identities = 30/181 (16%), Positives = 60/181 (33%), Gaps = 26/181 (14%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV 139
           A  ++     W++G + R++A + L+ +  G +L+R     P       Y LS+  + +V
Sbjct: 4   ARFDSSDRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGD-----YVLSVSENSRV 58

Query: 140 KHMKVYEKEMDGVPQYFLSQSRYFRSIVELI---------------CCYERNSLIENFIG 184
            H  +         + F    + F  +  L+                     S     + 
Sbjct: 59  SHYIINSLP----NRRFKIGDQEFDHLPALLEFYKIHYLDTTTLIEPAPRYPSPPMGSVS 114

Query: 185 LNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
                            +DF   +A  LP K+G  ++++ K  E   WW  +  +     
Sbjct: 115 APNLPTAEDNLEYVRTLYDFPGNDAEDLPFKKGEILVIIEKPEE--QWWSARNKDGRVGM 172

Query: 245 F 245
            
Sbjct: 173 I 173

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 40.0 bits (92), Expect = 4e-04
 Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 188 RLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             Q       A+ +   C  +   L L+ G  V V        G W+G+++ R   F
Sbjct: 232 STQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNIN--GQWEGEVNGRKGLF 286

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 77.9 bits (191), Expect = 7e-18
 Identities = 35/165 (21%), Positives = 65/165 (39%), Gaps = 19/165 (11%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLL--EREADGTYLLRIRPQGPTHPNETIYALSLKTDE 137
              +      ++   M RE+A  LL   + + GT+L+R      + P E  Y+L+++  +
Sbjct: 4   NGFDPFEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDS----SRPGE--YSLTVREAD 57

Query: 138 K---VKHMKVY---EKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQL 191
           +   V H  +     KE           ++ F  I  L+  ++   L E      +    
Sbjct: 58  EGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPDIPALLNHFKMRVLTEAS---LLAAYK 114

Query: 192 PFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
                + V  F F       LP +QG ++ +LSK  +   WW+ +
Sbjct: 115 KPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQ--DWWEAR 157

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A Length = 112

 Score = 75.7 bits (187), Expect = 1e-17
 Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 13/109 (11%)

Query: 84  NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMK 143
           +L ++ W+ G + R  A  LL    +G++L+R      + P +   ++SL+ + +V H +
Sbjct: 1   SLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRES---ESSPGQ--RSISLRYEGRVYHYR 55

Query: 144 VYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           +     DG  + ++S    F ++ EL+  +   +      GL   L  P
Sbjct: 56  INTAS-DG--KLYVSSESRFNTLAELVHHHSTVAD-----GLITTLHYP 96

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A Length = 106

 Score = 75.7 bits (187), Expect = 1e-17
 Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 14/109 (12%)

Query: 84  NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMK 143
            LS   WF G++ RE+A  LL     G +L+R       +P +  Y L + +D KV+H +
Sbjct: 4   KLSLMPWFHGKITREQAERLLYPPETGLFLVRES---TNYPGD--YTLCVSSDGKVEHYR 58

Query: 144 VYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           +         +  + +  YF ++++L+  Y  ++      GL  RL  P
Sbjct: 59  IMYH--AS--KLSIDEEVYFENLMQLVEHYTSDAD-----GLCTRLIKP 98

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 125

 Score = 75.0 bits (185), Expect = 3e-17
 Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 33/138 (23%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDE---- 137
            NL  Y W+   + R +A  LL +E+ +G +++R       H     Y +S+        
Sbjct: 11  TNLEIYEWYHRNITRNQAEHLLRQESKEGAFIVRDS----RHLGS--YTISVFMGARRST 64

Query: 138 --KVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
              +KH ++ + +  G  Q+++++   F+SI ELI  ++ N+      GL  RL+ P   
Sbjct: 65  EAAIKHYQIKKND-SG--QWYVAERHAFQSIPELIWYHQHNAA-----GLMTRLRYP--- 113

Query: 196 IIAVAEFDFCPTEANQLP 213
                         +  P
Sbjct: 114 ---------VGLMGSSGP 122

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 100

 Score = 74.1 bits (183), Expect = 3e-17
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 15/105 (14%)

Query: 90  WFVGEMGREKATSLLERE--ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           WF G + R +A   L+ E  A G +L+R+         +  Y LS++  + V+H K++ +
Sbjct: 4   WFFGCISRSEAVRRLQAEGNATGAFLIRVSE---KPSAD--YVLSVRDTQAVRHYKIWRR 58

Query: 148 EMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
              G  +  L+++  F S+ EL+  +   SL        +RL  P
Sbjct: 59  A-GG--RLHLNEAVSFLSLPELVNYHRAQSL-----SHGLRLAAP 95

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 77.3 bits (190), Expect = 3e-17
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 17/115 (14%)

Query: 82  HENLSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVK 140
                   W+   + R +A  +L R   DG +L+R R      PN   YA+S + + K+K
Sbjct: 116 TNAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKR----NEPNS--YAISFRAEGKIK 169

Query: 141 HMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
           H +V +   +G  Q  +  +  F S+V+LI  YE++ L        ++L+ P  +
Sbjct: 170 HCRVQQ---EG--QTVMLGNSEFDSLVDLISYYEKHPL-----YRKMKLRYPINE 214

>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition, tandem SH2 domains, A analog, ATP-binding, craniosynostosis, disease mutation; HET: PTR DVT ACP; 2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A* Length = 226

 Score = 61.1 bits (148), Expect = 3e-11
 Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 16/98 (16%)

Query: 90  WFVGEM-----GREKATSLLEREA------DGTYLLRIRPQGPTHPNETIYALSLKTDEK 138
           WF G++     GR  A  LL          DG++L+R   +  T   +  Y LS   + K
Sbjct: 6   WFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVR---ESETFVGD--YTLSFWRNGK 60

Query: 139 VKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERN 176
           V+H +++ ++  G P++FL+ +  F S+ +LI  Y++ 
Sbjct: 61  VQHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQQV 98

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens} Length = 141

 Score = 75.2 bits (185), Expect = 4e-17
 Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 12/116 (10%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV 139
            + + L++  W+ G + R +A   L    DG++L+R            + +LS ++  K 
Sbjct: 16  EELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDR-----YLLSLSFRSHGKT 70

Query: 140 KHMKVYEKEMDGVPQYFLSQS---RYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            H ++     +G  ++   +        SIV+LI     +S    F     RL   
Sbjct: 71  LHTRIEHS--NG--RFSFYEQPDVEGHTSIVDLIEHSIGDSENGAFCYSRSRLPGS 122

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 121

 Score = 74.2 bits (183), Expect = 5e-17
 Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 15/115 (13%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDE 137
           A+  +L    WF G + R  A   L       G +L+R   +  +   +  ++LS+  + 
Sbjct: 8   AEDRSLQAEPWFFGAIKRADAEKQLLYSENQTGAFLIR---ESESQKGD--FSLSVLDEG 62

Query: 138 KVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            VKH ++   +  G   +FL++ + F ++ E +  Y   S      GL V+L+ P
Sbjct: 63  VVKHYRIRRLDEGG---FFLTRRKVFSTLNEFVNYYTTTSD-----GLCVKLEKP 109

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A* Length = 100

 Score = 73.8 bits (182), Expect = 5e-17
 Identities = 20/102 (19%), Positives = 46/102 (45%), Gaps = 9/102 (8%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV 139
               ++    WF   + R +A +LL  +  G +++R      + P +  +++S++ ++ V
Sbjct: 1   GSFIDIEFPEWFHEGLSRHQAENLLMGKDIGFFIIRAS---QSSPGD--FSISVRHEDDV 55

Query: 140 KHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIEN 181
           +H KV      G    +   +  F S+ +L+  Y   S+ + 
Sbjct: 56  QHFKVMRDT-KG---NYFLWTEKFPSLNKLVDYYRTTSISKQ 93

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 77.2 bits (190), Expect = 6e-17
 Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 16/166 (9%)

Query: 29  CYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWTAKSWADHENLSEY 88
           C      +  P    C     +     +   ++     Q +       +           
Sbjct: 100 CNRPSGLEPQPGVFDCLRDAMVRDYVRQTWKLEGEALEQAIISQAPQVEKLIATTAHERM 159

Query: 89  LWFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYE 146
            W+   + RE+A   L   A  DG +LLR R           YALSL   + V H  +  
Sbjct: 160 PWYHSSLTREEAERKLYSGAQTDGKFLLRPR----KEQGT--YALSLIYGKTVYHYLIS- 212

Query: 147 KEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           ++  G  +Y + +   F ++ +L+   +  +      GL   L+  
Sbjct: 213 QDKAG--KYCIPEGTKFDTLWQLVEYLKLKA-----DGLIYCLKEA 251

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A Length = 254

 Score = 69.2 bits (169), Expect = 5e-14
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 85  LSEYLWFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
            +   +F G + R +A   L+     DG +LLR   Q         Y LSL  D +  H 
Sbjct: 3   AAHLPFFYGSISRAEAEEHLKLAGMADGLFLLR---QCLRSLGG--YVLSLVHDVRFHHF 57

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNS 177
            + E++++G   Y ++  +      EL   Y R+ 
Sbjct: 58  PI-ERQLNG--TYAIAGGKAHCGPAELCEFYSRDP 89

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 77.2 bits (189), Expect = 1e-16
 Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 20/172 (11%)

Query: 82  HENLSEYLWFVGEMGREKATSLL--EREADGTYLLRIRPQGPTHPNETIYALSLKTDEK- 138
            +      ++   M RE+A  LL   + + GT+L+R      + P E  Y+L+++  ++ 
Sbjct: 35  FDPFEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDS----SRPGE--YSLTVREADEG 88

Query: 139 --VKHMKVY--EKEMDGVPQ-YFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF 193
             V H  +   E + DG         ++ F  I  L+  ++   L E  +    +     
Sbjct: 89  NAVCHYLIERGEPKEDGTAAAGVKIANQSFPDIPALLNHFKMRVLTEASLLAAYK---KP 145

Query: 194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDE-RVSYF 244
              + V  F F       LP +QG ++ +LSK  +   WW+ +         
Sbjct: 146 IIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQ--DWWEARNALGTTGLV 195

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 40.2 bits (93), Expect = 4e-04
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 192 PFRQIIAVAEFDFCPT--EANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           P     A   FD  P   +  QL +K+G  V+V  K     G +K ++D ++   
Sbjct: 244 PRLPAKAKVTFDRVPNAYDPTQLRVKKGQTVLVTQKMSN--GMYKAELDGQIGSV 296

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A* Length = 102

 Score = 72.3 bits (178), Expect = 2e-16
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 11/106 (10%)

Query: 90  WFVGEMGREKATSLL-EREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           W+ G + R +A   L ER  +G +L+R      + P++  +++SLK   K KH KV  + 
Sbjct: 7   WYYGNVTRHQAECALNERGVEGDFLIR---DSESSPSD--FSVSLKASGKNKHFKV--QL 59

Query: 149 MDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR 194
           +D    Y + Q R F ++ EL+  Y++  +  +  G  + L    +
Sbjct: 60  VDN--VYCIGQ-RRFHTMDELVEHYKKAPIFTSEHGEKLYLVRALQ 102

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 72.7 bits (179), Expect = 2e-16
 Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 15/109 (13%)

Query: 85  LSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMK 143
               +WF G++ +++A +LL       ++L+R        P +  Y+L  +T+E ++  K
Sbjct: 13  HEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSD---NTPGD--YSLYFRTNENIQRFK 67

Query: 144 VYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           +     +     F+   RY+ SI ++I  Y +       I     L+ P
Sbjct: 68  ICPTP-NN---QFMMGGRYYNSIGDIIDHYRKEQ-----IVEGYYLKEP 107

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus} Length = 138

 Score = 73.0 bits (179), Expect = 2e-16
 Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 14/117 (11%)

Query: 83  ENLSEYLWFVGEM-GREKATSLLEREA------DGTYLLRIRPQGPTHPNETIYALSLKT 135
           E      WF  ++  R  A  LL+         DGT+L+R      T PN+  Y LS   
Sbjct: 17  ELHFGEKWFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESE---TFPND--YTLSFWR 71

Query: 136 DEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
             +V+H ++     +GV +Y+L+ +  F SI  LI  Y    L        +RL  P
Sbjct: 72  SGRVQHCRIRSTMENGVMKYYLTDNLTFNSIYALIQHYREAHLRCA--EFELRLTDP 126

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 75.4 bits (184), Expect = 5e-16
 Identities = 34/187 (18%), Positives = 63/187 (33%), Gaps = 29/187 (15%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV 139
            + ++     W+ G + R++A +LL+ +  G +L+R     P       Y LS+  + +V
Sbjct: 3   GNFDSEERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGD-----YVLSVSENSRV 57

Query: 140 KHMKVYEKEM-------------DGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLN 186
            H  +                     P       + F S+  L+  Y+ + L    +   
Sbjct: 58  SHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEP 117

Query: 187 VRLQLPFR--------QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI- 237
           V                    A FDF   +   LP K+G  + +  K  E   WW  +  
Sbjct: 118 VSRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEE--QWWNAEDS 175

Query: 238 DERVSYF 244
           + +    
Sbjct: 176 EGKRGMI 182

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 44.2 bits (103), Expect = 2e-05
 Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 2/65 (3%)

Query: 180 ENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDE 239
            +       LQ        + +      +   L L+ G  V V        G W+G+ + 
Sbjct: 224 PSVNTPLPNLQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVS--GQWEGECNG 281

Query: 240 RVSYF 244
           +  +F
Sbjct: 282 KRGHF 286

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ... Length = 117

 Score = 71.2 bits (175), Expect = 6e-16
 Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 15/109 (13%)

Query: 85  LSEYLWFVGEMGREKATSLL-EREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMK 143
           +  + WF G++ R KA  +L ++  DG +L+R      + P +  ++LS+K    V+H K
Sbjct: 3   MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESE---SAPGD--FSLSVKFGNDVQHFK 57

Query: 144 VYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           V      G    +      F S+ EL+  +   S     +  N ++ L 
Sbjct: 58  VLRDG-AG---KYFLWVVKFNSLNELVDYHRSTS-----VSRNQQIFLR 97

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A* Length = 104

 Score = 70.4 bits (173), Expect = 8e-16
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 12/110 (10%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
             L    WF G++ R +A +LL+   +G +L+R   +  T P +  Y L+     + KH+
Sbjct: 2   SQLRGEPWFHGKLSRREAEALLQL--NGDFLVR---ESTTTPGQ--YVLTGLQSGQPKHL 54

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            + + E         ++   F S+  LI  +  N L     G  + LQ P
Sbjct: 55  LLVDPE-----GVVRTKDHRFESVSHLISYHMDNHLPIISAGSELCLQQP 99

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 119

 Score = 70.4 bits (173), Expect = 1e-15
 Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 12/118 (10%)

Query: 75  TAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLK 134
           +  S           WF G + RE A +LLE +  G++L+R+            Y LS K
Sbjct: 3   SGSSGGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRVSHSHVG------YTLSYK 56

Query: 135 TDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
                 H  V   + DG       +     S+  L+  +++  +          L  P
Sbjct: 57  AQSSCCHFMVKLLD-DGT-FMIPGEKVAHTSLDALVTFHQQKPI----EPRRELLTQP 108

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 187

 Score = 71.8 bits (176), Expect = 2e-15
 Identities = 19/103 (18%), Positives = 41/103 (39%), Gaps = 13/103 (12%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV 139
            D   ++    + G M +  A +LLE + +GT+LLR   Q        ++++S +   + 
Sbjct: 26  PDLLQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQED-----YLFSVSFRRYSRS 80

Query: 140 KHMKVYEKEMDGVPQYFLSQSR----YFRSIVELICCYERNSL 178
            H ++ +   +    +          +   I  L+  Y+  S 
Sbjct: 81  LHARIEQW--NH--NFSFDAHDPCVFHSPDITGLLEHYKDPSA 119

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B Length = 118

 Score = 68.9 bits (169), Expect = 4e-15
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 19/120 (15%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEK 138
               NL  Y W+   + R+KA  LL     +G +++R        P    Y +S+ T   
Sbjct: 1   GSPNNLETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDS----RTPGT--YTVSVFTKAI 54

Query: 139 ------VKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
                 +KH  + E   D   +Y++++   F SI  LI  ++ N       GL  RL+ P
Sbjct: 55  ISENPCIKHYHIKETN-DSPKRYYVAEKYVFDSIPLLIQYHQYNGG-----GLVTRLRYP 108

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1 Length = 169

 Score = 70.2 bits (172), Expect = 4e-15
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 15/123 (12%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
             L +  W+ G M   +A   L+   +GT+L+R            +  +S+KT     ++
Sbjct: 12  RELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSD-----YLLTISVKTSAGPTNL 66

Query: 143 KVYEKE---MDGVPQYFLSQSRYFRSIVELICCYERNSLIENFI-------GLNVRLQLP 192
           ++  ++            S+ + F S+V LI  Y +    +           +++ L  P
Sbjct: 67  RIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCKDKRTGPEAPRNGTVHLYLTKP 126

Query: 193 FRQ 195
              
Sbjct: 127 LYT 129

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A* Length = 96

 Score = 68.0 bits (167), Expect = 5e-15
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 15/103 (14%)

Query: 90  WFVGEMGREKATSLLERE-ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           WF G++ R KA  +L ++  DG +L+R      + P +  ++LS+K    V+H KV    
Sbjct: 5   WFFGKIPRAKAEEMLSKQRHDGAFLIRESE---SAPGD--FSLSVKFGNDVQHFKVLRDG 59

Query: 149 MDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQL 191
             G    +      F S+ EL+  +   S     +  N ++ L
Sbjct: 60  -AG---KYFLWVVKFNSLNELVDYHRSTS-----VSRNQQIFL 93

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C* Length = 111

 Score = 68.5 bits (168), Expect = 6e-15
 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 13/117 (11%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLL---EREADGTYLLRIRPQGPTHPNETIYALSLKTD 136
              + LS Y WF G + R KA  L+      + G +L+R   Q  T   E    L+    
Sbjct: 1   GSDQPLSGYPWFHGMLSRLKAAQLVLEGGTGSHGVFLVR---QSETRRGE--CVLTFNFQ 55

Query: 137 EKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIG-LNVRLQLP 192
            K KH+++      G       Q  +F+SI +++  +  + +     G  +V L   
Sbjct: 56  GKAKHLRLSLNA-AG---QCRVQHLHFQSIFDMLEHFRVHPIPLESGGSSDVVLVSY 108

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 68.1 bits (167), Expect = 7e-15
 Identities = 19/94 (20%), Positives = 43/94 (45%), Gaps = 9/94 (9%)

Query: 85  LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
                W++G + R++A + L+ +  G +L+R      T P +  Y LS+  + +V H  +
Sbjct: 16  SDRSAWYMGPVSRQEAQTRLQGQRHGMFLVR---DSSTCPGD--YVLSVSENSRVSHYII 70

Query: 145 YEKEMDGVPQYFLSQSRYFRSIVELICCYERNSL 178
                +   ++ +   + F  +  L+  Y+ + L
Sbjct: 71  NSLP-NR--RFKIGD-QEFDHLPALLEFYKIHYL 100

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A Length = 131

 Score = 68.4 bits (167), Expect = 8e-15
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 26/126 (20%)

Query: 84  NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKT-------- 135
           + +   W+   + R++A +LL+ +  G +L+R      +      Y L+LK         
Sbjct: 16  SDTSKFWYKPHLSRDQAIALLKDKDPGAFLIR---DSHSFQGA--YGLALKVATPPPSAQ 70

Query: 136 -------DEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVR 188
                  ++ V+H  + E    GV         YF S+  L+  +  + +      L   
Sbjct: 71  PWKGDPVEQLVRHFLI-ETGPKGVKIKGCPSEPYFGSLSALVSQHSISPI-----SLPCC 124

Query: 189 LQLPFR 194
           L++P +
Sbjct: 125 LRIPSK 130

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus} Length = 152

 Score = 68.8 bits (168), Expect = 1e-14
 Identities = 20/124 (16%), Positives = 41/124 (33%), Gaps = 10/124 (8%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV 139
                L E  ++   +   +A  LL  E  GT+L+R             + LS+KT    
Sbjct: 26  NAVRKLQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQR-----HFFTLSVKTQSGT 80

Query: 140 KHMKVYEKE----MDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
           K++++  +     +   P         F  +++L+  Y     +               +
Sbjct: 81  KNLRIQXEGGSFSLQSDP-RSTQPVPRFDXVLKLVHHYMPPQALPGSTPKRAYYIYSGGE 139

Query: 196 IIAV 199
            I +
Sbjct: 140 KIPL 143

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 70.3 bits (172), Expect = 2e-14
 Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 16/109 (14%)

Query: 90  WFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           WF G++ RE++  ++   +  +G +L+R R     +     YAL L  + KV H ++ + 
Sbjct: 160 WFHGKISREESEQIVLIGSKTNGKFLIRAR----DNNGS--YALCLLHEGKVLHYRIDKD 213

Query: 148 EMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI 196
           +  G  +  + + + F ++ +L+  Y   +      GL   L +P ++I
Sbjct: 214 K-TG--KLSIPEGKKFDTLWQLVEHYSYKAD-----GLLRVLTVPCQKI 254

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A* Length = 254

 Score = 66.9 bits (163), Expect = 3e-13
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 10/90 (11%)

Query: 90  WFVGEMGREKATSLLERE--ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           +F G + RE+A   L +   +DG YLLR   Q   +     +ALS+    K  H  + E+
Sbjct: 7   FFFGNITREEAEDYLVQGGMSDGLYLLR---QSRNYLGG--FALSVAHGRKAHHYTI-ER 60

Query: 148 EMDGVPQYFLSQSRYFRSIVELICCYERNS 177
           E++G   Y ++  R   S  +L   + + S
Sbjct: 61  ELNG--TYAIAGGRTHASPADLCHYHSQES 88

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A Length = 105

 Score = 65.7 bits (161), Expect = 4e-14
 Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 13/106 (12%)

Query: 90  WFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           WF G + RE++  +++++   DG +LLR      ++P    + L+L   +K+K+ ++   
Sbjct: 7   WFHGRISREESHRIIKQQGLVDGLFLLRDSQ---SNPKA--FVLTLCHHQKIKNFQILPC 61

Query: 148 EMDGVPQYFLSQSR-YFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           E DG   + L      F  +++L+  Y+ N        L  +L+  
Sbjct: 62  EDDGQTFFSLDDGNTKFSDLIQLVDFYQLNKG-----VLPCKLKHH 102

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A Length = 117

 Score = 65.8 bits (161), Expect = 7e-14
 Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 13/110 (11%)

Query: 90  WFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           WF G + RE++  L+ ++   DG +L+R   +   +P    + LSL   +KVKH  +   
Sbjct: 16  WFHGRISREESQRLIGQQGLVDGLFLVR---ESQRNPQG--FVLSLCHLQKVKHYLILPS 70

Query: 148 EMDGVPQYFLSQSR-YFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI 196
           E +G   + +   +  F  +++L+  ++ N        L   L+    ++
Sbjct: 71  EEEGRLYFSMDDGQTRFTDLLQLVEFHQLNRG-----ILPCLLRHCCTRV 115

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 Length = 109

 Score = 65.2 bits (159), Expect = 8e-14
 Identities = 24/119 (20%), Positives = 45/119 (37%), Gaps = 24/119 (20%)

Query: 90  WFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVY---- 145
           W+ G + R++A +LL+ +  G +L+R      T P +  Y LS+  + +V H  +     
Sbjct: 2   WYWGRLSRQEAVALLQGQRHGVFLVRDS---STSPGD--YVLSVSENSRVSHYIINSSGP 56

Query: 146 ---------EKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
                    +      P       + F S+  L+  Y+ + L          L  P  +
Sbjct: 57  RPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDT------TTLIEPVSR 109

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A* Length = 104

 Score = 64.6 bits (158), Expect = 1e-13
 Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 13/111 (11%)

Query: 85  LSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMK 143
           +     + G++ RE    LL     DG+YLLR      + P    Y L +     +   +
Sbjct: 1   MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSE---SVPGV--YCLCVLYHGYIYTYR 55

Query: 144 VYEKEMDG--VPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           V + E              RYFR I  LI  +++        G+ + LQ P
Sbjct: 56  VSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKPDQ-----GIVIPLQYP 101

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus} Length = 164

 Score = 66.2 bits (161), Expect = 1e-13
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 10/117 (8%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
             L E  ++   +   +A  LL  E  GT+L+R             + LS+KT    K++
Sbjct: 18  RKLQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQR-----HFFTLSVKTQSGTKNL 72

Query: 143 KVYEKE----MDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
           ++  +     +   P         F  +++L+  Y       +F            +
Sbjct: 73  RIQCEGGSFSLQSDP-RSTQPVPRFDCVLKLVHHYMPPPGTPSFSLPPTEPSSEVPE 128

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens} Length = 119

 Score = 64.6 bits (158), Expect = 1e-13
 Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 13/106 (12%)

Query: 90  WFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           W  G + R KA  LL R   DG++L+R      +      YAL +     V   ++   E
Sbjct: 12  WNHGNITRSKAEELLSRTGKDGSFLVRASE---SISRA--YALCVLYRNCVYTYRILPNE 66

Query: 149 MDG--VPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            D   V        R+F  + +LI  Y++ ++     GL   LQ P
Sbjct: 67  DDKFTVQASEGVSMRFFTKLDQLIEFYKKENM-----GLVTHLQYP 107

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A Length = 128

 Score = 64.7 bits (158), Expect = 2e-13
 Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 13/111 (11%)

Query: 85  LSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMK 143
           +     + G++ RE    LL     DG+YLLR      + P    Y L +     +   +
Sbjct: 1   MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSE---SVPGV--YCLCVLYHGYIYTYR 55

Query: 144 VYEKEMDG--VPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           V + E              RYFR I  LI  +++        G+ + LQ P
Sbjct: 56  VSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKPDQ-----GIVIPLQYP 101

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A Length = 114

 Score = 64.3 bits (157), Expect = 2e-13
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 13/96 (13%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
           + L E LW+ G + R +   LL     G +L+R             Y LS+  D   +H 
Sbjct: 11  KPLHEQLWYHGAIPRAEVAELLVH--SGDFLVRESQGKQE------YVLSVLWDGLPRHF 62

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSL 178
            +  + +D    Y L +   F SI  LI        
Sbjct: 63  II--QSLDN--LYRL-EGEGFPSIPLLIDHLLSTQQ 93

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1 Length = 103

 Score = 63.1 bits (154), Expect = 4e-13
 Identities = 19/110 (17%), Positives = 43/110 (39%), Gaps = 13/110 (11%)

Query: 87  EYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVY 145
           +  ++ G + + +  +LL +   DG +L+R      + P      L +   + V   +++
Sbjct: 2   DLPYYHGCLTKRECEALLLKGGVDGNFLIRDSE---SVPGA--LCLCVSFKKLVYSYRIF 56

Query: 146 EKEMDG--VPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF 193
            ++     +     +    F ++ EL+  Y +        GL V L  P 
Sbjct: 57  REKHGYYRIETDAHTPRTIFPNLQELVSKYGKPGQ-----GLVVHLSNPI 101

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F* Length = 106

 Score = 63.4 bits (155), Expect = 4e-13
 Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 20/116 (17%)

Query: 84  NLSEYLWFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKT-----D 136
           ++    W+ G++GR+ A   L       GT+L+R      T      Y+LS++       
Sbjct: 1   SIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESE---TTKGA--YSLSIRDWDDMKG 55

Query: 137 EKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           + VKH K+ + +  G   Y+++    F ++ +L+  Y   +      GL+ RL +P
Sbjct: 56  DHVKHYKIRKLDNGG---YYITTRAQFETLQQLVQHYSERAA-----GLSSRLVVP 103

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens} Length = 116

 Score = 63.5 bits (155), Expect = 4e-13
 Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 12/100 (12%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV 139
           +  + L+E  W+ G + R +A  LL++   G +L+R   +    P E  Y LS+ +D + 
Sbjct: 9   SHMKPLAEQDWYHGAIPRIEAQELLKK--QGDFLVR---ESHGKPGE--YVLSVYSDGQR 61

Query: 140 KHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLI 179
           +H  +   +      Y       F +I +LI  +     +
Sbjct: 62  RHFIIQYVDN----MYRFEG-TGFSNIPQLIDHHYTTKQV 96

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens} Length = 126

 Score = 63.9 bits (156), Expect = 4e-13
 Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 13/106 (12%)

Query: 90  WFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           WF  ++ R++A  L+ ++   DG +L+R      ++P    + LS+   +K+KH ++   
Sbjct: 28  WFHHKISRDEAQRLIIQQGLVDGVFLVRDSQ---SNPKT--FVLSMSHGQKIKHFQIIPV 82

Query: 148 EMDGVPQYFLSQSR-YFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           E DG   + L      F  +++L+  Y+ N        L  +L+  
Sbjct: 83  EDDGEMFHTLDDGHTRFTDLIQLVEFYQLNKG-----VLPCKLKHY 123

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 67.0 bits (164), Expect = 7e-13
 Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 25/161 (15%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
             LS   WF G++ RE+A  LL     G +L+R   +   +P +  Y L +  + KV+H 
Sbjct: 75  TKLSLMPWFHGKITREQAERLLYPPETGLFLVR---ESTNYPGD--YTLCVSCEGKVEHY 129

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEF 202
           ++         +  + +  YF ++++L+  Y  ++      GL  RL  P      VA  
Sbjct: 130 RI--MYHAS--KLSIDEEVYFENLMQLVEHYTTDAD-----GLCTRLIKPKVMEGTVAAQ 180

Query: 203 DFCPTEANQLPLKQGCQVIVLSK---EGE----QKGWWKGK 236
           D        L +K+    + L +   +GE      G ++G 
Sbjct: 181 DEFYRSGWALNMKE----LKLLQTIGKGEFGDVMLGDYRGN 217

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 65.7 bits (161), Expect = 2e-12
 Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 18/110 (16%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
           + L E LW+ G + R +   LL     G +L+R          E  Y LS+  D   +H 
Sbjct: 8   KPLHEQLWYHGAIPRAEVAELLVH--SGDFLVRES----QGKQE--YVLSVLWDGLPRHF 59

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            +   +       +  +   F SI  LI              L  +  + 
Sbjct: 60  IIQSLD-----NLYRLEGEGFPSIPLLIDHLLSTQQ-----PLTKKSGVV 99

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 65.9 bits (161), Expect = 2e-12
 Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 13/110 (11%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
            +L ++ W+ G + R  A  LL    +G++L+R      + P +   ++SL+ + +V H 
Sbjct: 100 NSLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRES---ESSPGQ--RSISLRYEGRVYHY 154

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           ++           ++S    F ++ EL+  +   +      GL   L  P
Sbjct: 155 RINTASDGK---LYVSSESRFNTLAELVHHHSTVAD-----GLITTLHYP 196

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A Length = 114

 Score = 61.2 bits (149), Expect = 3e-12
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 19/116 (16%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTD---- 136
           E L    WF   + R+ A   L       G++L+R             ++LS+K      
Sbjct: 7   ETLEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGA-----FSLSVKDITTQG 61

Query: 137 EKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           E VKH K+   + +G   Y++S    F ++  L+  Y +        GL  +L LP
Sbjct: 62  EVVKHYKIRSLD-NG--GYYISPRITFPTLQALVQHYSKKGD-----GLCQKLTLP 109

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens} Length = 125

 Score = 61.0 bits (148), Expect = 4e-12
 Identities = 14/92 (15%), Positives = 39/92 (42%), Gaps = 12/92 (13%)

Query: 90  WFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTD---EKVKHMKVY 145
                + R++AT +L++    G  +  +RP   +      Y+++++ +    ++KH KV 
Sbjct: 17  ACFYTVSRKEATEMLQKNPSLGNMI--LRPG--SDSRN--YSITIRQEIDIPRIKHYKV- 69

Query: 146 EKEMDGVPQYFLSQSRYFRSIVELICCYERNS 177
              +       L +     ++  +I  + + +
Sbjct: 70  -MSVGQNYTIELEKPVTLPNLFSVIDYFVKET 100

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 65.0 bits (158), Expect = 5e-12
 Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 15/115 (13%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVK 140
           +  +   +F G + R +A   L+     DG +LLR   Q         Y LSL  D +  
Sbjct: 3   DPAAHLPFFYGSISRAEAEEHLKLAGMADGLFLLR---QCLRSLGG--YVLSLVHDVRFH 57

Query: 141 HMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
           H  + E++++G   Y ++  +      EL   Y R+       GL   L+ P  +
Sbjct: 58  HFPI-ERQLNG--TYAIAGGKAHCGPAELCEFYSRDPD-----GLPCNLRKPCNR 104

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 58.0 bits (140), Expect = 8e-10
 Identities = 27/155 (17%), Positives = 49/155 (31%), Gaps = 11/155 (7%)

Query: 18  SRGLRPLCSQACYLACHKQCIPHTGRCGTGVPLPAMSPRPPLMDIAGAAQPLGGNEWTAK 77
             GL     + C      +  P    C     +     +   ++     Q +       +
Sbjct: 91  PDGLPCNLRKPCNRPSGLEPQPGVFDCLRDAMVRDYVRQTWKLEGEALEQAIISQAPQVE 150

Query: 78  SWADHENLSEYLWFVGEMGREKATSLLERE--ADGTYLLRIRPQGPTHPNETIYALSLKT 135
                       W+   + RE+A   L      DG +LLR R           YALSL  
Sbjct: 151 KLIATTAHERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPR----KEQGT--YALSLIY 204

Query: 136 DEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELI 170
            + V H  + + +      Y + +   F ++ +L+
Sbjct: 205 GKTVYHYLISQDKAGK---YCIPEGTKFDTLWQLV 236

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A* Length = 105

 Score = 60.0 bits (146), Expect = 5e-12
 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 20/115 (17%)

Query: 85  LSEYLWFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEK---- 138
           L    WF   + R+ A   L       G++L+R      +      ++LS++  ++    
Sbjct: 1   LEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRES---ESTAGS--FSLSVRDFDQNQGE 55

Query: 139 -VKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            VKH K+   + +G   +++S    F  + EL+  Y   S      GL  RL  P
Sbjct: 56  VVKHYKIRNLD-NG--GFYISPRITFPGLHELVRHYTNASD-----GLCTRLSRP 102

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 16/116 (13%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKT-----DE 137
           ++L    WF   + R+ A   L    +      IR    T      Y+LS++       +
Sbjct: 65  DSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRD-SETTKGS--YSLSVRDYDPRQGD 121

Query: 138 KVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF 193
            VKH K+   +  G   +++S    F ++ EL+  Y++ +      GL  +L +P 
Sbjct: 122 TVKHYKIRTLDNGG---FYISPRSTFSTLQELVDHYKKGND-----GLCQKLSVPC 169

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 126

 Score = 51.3 bits (122), Expect = 1e-08
 Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 17/110 (15%)

Query: 90  WFVGEMGREKATSLLEREA------DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMK 143
            FV      +   L +  +      DG Y +R            +  +  +T  KV++ +
Sbjct: 19  VFVNTTESCEVERLFKATSPRGEPQDGLYCIRNSSTKSGK----VLVVWDETSNKVRNYR 74

Query: 144 VYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF 193
           ++EK+     +++L     F S+  ++  Y  + L  +    ++ L+ P+
Sbjct: 75  IFEKD----SKFYLEGEVLFVSVGSMVEHYHTHVLPSHQ---SLLLRHPY 117

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 73

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 17/47 (36%), Positives = 30/47 (63%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           AVA ++F   +  +L L++G  V + S+ G  +GWWKG+ + R+ +F
Sbjct: 10  AVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWF 56

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus} Length = 142

 Score = 50.1 bits (119), Expect = 5e-08
 Identities = 20/47 (42%), Positives = 34/47 (72%), Gaps = 1/47 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A A +DFC  + ++L LK+G  + +L+K+G+Q GWW+G+I  R+ +F
Sbjct: 8   AKARYDFCARDRSELSLKEGDIIKILNKKGQQ-GWWRGEIYGRIGWF 53

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A Length = 60

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           AVA + F   E+  LP ++G  + +L K   Q  WW G+++ R   F
Sbjct: 6   AVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIF 52

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 85

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            +A   +     + L   +G  + +L     + GW  G    R   F
Sbjct: 11  VIALRSYITDNCSLLSFHRGDLIKLLPVATLEPGWQFGSAGGRSGLF 57

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 80

 Score = 47.4 bits (113), Expect = 1e-07
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A + F   +   L  + G ++ V+SK      WW+GK+  +   F
Sbjct: 20  VTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGIF 66

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 70

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
               F +     ++L +K+G  V +++K+    GWW+G+++ R   F
Sbjct: 10  CKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVF 56

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A Length = 64

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 13/47 (27%), Positives = 26/47 (55%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
               F +  T  ++L  ++G  + ++SKE  + GWWKG+++ +   F
Sbjct: 9   CRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGELNGKEGVF 55

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 46.9 bits (112), Expect = 1e-07
 Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            V   ++   E ++L L+ G  V V+ K     GWW     E   + 
Sbjct: 11  YVVVSNYKKQENSELSLQAGEVVDVIEKNES--GWWFVSTSEEQGWV 55

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A* Length = 175

 Score = 49.3 bits (117), Expect = 1e-07
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 10/111 (9%)

Query: 84  NLSEYLWFVGEMGREKATSLL--EREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKH 141
           +L    WF   + R+ A   L       G++L+R         + ++        E VKH
Sbjct: 70  SLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKH 129

Query: 142 MKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            K+   +      +++S    F  + EL+  Y   S      GL  RL  P
Sbjct: 130 YKIRNLDNG---GFYISPRITFPGLHELVRHYTNASD-----GLCTRLSRP 172

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A Length = 69

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
               F +     ++L +K+G  V +++K+    GWW+G+++ R   F
Sbjct: 5   CKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVF 51

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A Length = 74

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 1/47 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A+A++DF  T  ++L  K+G  + VL++E +Q  W+K +++ +  + 
Sbjct: 12  AIAKYDFKATADDELSFKRGDILKVLNEECDQ-NWYKAELNGKDGFI 57

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 80

 Score = 46.7 bits (111), Expect = 2e-07
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDER 240
           IA     +  + + QL L  G  +++L K     GWW+G++  R
Sbjct: 9   IAQVTSAYVASGSEQLSLAPGQLILILKKNTS--GWWQGELQAR 50

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens} Length = 73

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 12/51 (23%), Positives = 26/51 (50%)

Query: 194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            +      F +     ++L +K+G  V +++K+    GWW+G+++ R   F
Sbjct: 8   SKDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVF 58

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 46.1 bits (110), Expect = 3e-07
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            VA + F P E   L ++ G  + +L    E   WWKGKI +R+ +F
Sbjct: 10  YVALYKFVPQENEDLEMRPGDIITLLEDSNE--DWWKGKIQDRIGFF 54

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens} Length = 58

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           + A+ EFD+     ++L +  G  +  + KE    GWW+G+I+ R   F
Sbjct: 2   VEAIVEFDYQAQHDDELTISVGEIITNIRKEDG--GWWEGQINGRRGLF 48

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 49.9 bits (119), Expect = 4e-07
 Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 20/117 (17%)

Query: 83  ENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEK-- 138
           +++    W+ G++ R ++  LL       GT+L+R      T      Y LS+   +   
Sbjct: 143 DSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESE---TTKGA--YCLSVSDFDNAK 197

Query: 139 ---VKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
              VKH K+ + +  G   ++++    F S+ +L+  Y +++      GL  RL   
Sbjct: 198 GLNVKHYKIRKLDSGG---FYITSRTQFNSLQQLVAYYSKHAD-----GLCHRLTTV 246

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 72

 Score = 45.4 bits (108), Expect = 4e-07
 Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             I A+A+FD+    A +L  K+G  +++  +  +   WW+G+ +      
Sbjct: 8   EPIEAIAKFDYVGRTARELSFKKGASLLLYQRASD--DWWEGRHNGIDGLI 56

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A Length = 63

 Score = 45.3 bits (108), Expect = 5e-07
 Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           + VA +DF  +  N L + +G ++ VL        W + +      + 
Sbjct: 7   LFVALYDFVASGDNTLSITKGEKLRVLGYNHNG-EWCEAQTKNGQGWV 53

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 91

 Score = 45.9 bits (109), Expect = 5e-07
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           +    + F      +L  ++G  + V+ K      WWK K
Sbjct: 19  VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCK 58

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens} Length = 69

 Score = 45.0 bits (107), Expect = 6e-07
 Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 193 FRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGE-QKGWWKGKIDERVSYF 244
              ++A A +D      ++L  ++G  + VL ++ +   GWW   +  R    
Sbjct: 1   HLNVLAKALYDNVAESPDELSFRKGDIMTVLEQDTQGLDGWWLCSLHGRQGIV 53

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 49.0 bits (117), Expect = 6e-07
 Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 20/120 (16%)

Query: 80  ADHENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKT-- 135
           A  +++    W+ G++ R ++  LL       GT+L+R      T      Y LS+    
Sbjct: 57  APSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRES---ETTKGA--YCLSVSDFD 111

Query: 136 ---DEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
                 VKH K+ + +  G   ++++    F S+ +L+  Y +++      GL  RL   
Sbjct: 112 NAKGLNVKHYKIRKLDSGG---FYITSRTQFNSLQQLVAYYSKHAD-----GLCHRLTTV 163

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus} Length = 120

 Score = 46.5 bits (110), Expect = 7e-07
 Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 2/48 (4%)

Query: 193 FRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDER 240
              + AV  ++F     ++L +  G  + + +       W+  K   R
Sbjct: 1   MAPLFAVTLYEFKAERDDELDVSPGENLSICAHYDY--EWFIAKPINR 46

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 71

 Score = 44.6 bits (106), Expect = 8e-07
 Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            V    +     +++  ++G  V V+ K  E  GWW  +   +  + 
Sbjct: 11  YVTVQPYTSQSKDEIGFEKGVTVEVIRKNLE--GWWYIRYLGKEGWA 55

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 69

 Score = 44.6 bits (106), Expect = 8e-07
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            +A + +   E   L   +G +++V  K+G    WW G I +R   F
Sbjct: 11  YIALYPYSSVEPGDLTFTEGEEILVTQKDG---EWWTGSIGDRSGIF 54

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A Length = 62

 Score = 44.5 bits (106), Expect = 9e-07
 Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            + E+D+     ++L ++ G  +  + K  E+ GW +G+++ R   F
Sbjct: 4   YIVEYDYDAVHDDELTIRVGEIIRNVKKLQEE-GWLEGELNGRRGMF 49

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 79

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 8/50 (16%), Positives = 20/50 (40%), Gaps = 2/50 (4%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQ--KGWWKGKIDERVSYF 244
           +  A + F     N+L +    ++ +L  +       WW  +++ +  Y 
Sbjct: 15  VYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYV 64

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens} Length = 72

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A +DF   E N+L  K G  + VL        WWKG+  + +  F
Sbjct: 20  VRAIYDFEAAEDNELTFKAGEIITVLDDSDP--NWWKGETHQGIGLF 64

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A Length = 108

 Score = 45.4 bits (107), Expect = 1e-06
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSK-EGEQKGWWKGKIDERVSYFFQLYWGNF 252
           +AVA  D+   +   L + +G  V V SK +G  + +W G +            G F
Sbjct: 24  MAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYF 80

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A Length = 68

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A A+FDF      +LPL++G  V +  +  +   W++G+   RV  F
Sbjct: 10  ARAKFDFKAQTLKELPLQKGDIVYIYKQIDQ--NWYEGEHHGRVGIF 54

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A Length = 71

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           +    + F      +L  ++G  + V+ K      WWK K
Sbjct: 8   VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCK 47

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 88

 Score = 44.8 bits (106), Expect = 1e-06
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A+ +   C  +   L L+ G  V V        G W+G+++ R   F
Sbjct: 21  AIQKRVPCAYDKTALALEVGDIVKVTRMNIN--GQWEGEVNGRKGLF 65

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1 Length = 62

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A +DF   E N+L  K G  + VL        WW+G+       F
Sbjct: 8   VRALYDFEAVEDNELTFKHGELITVLDDSDA--NWWQGENHRGTGLF 52

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A Length = 62

 Score = 43.8 bits (104), Expect = 1e-06
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 192 PFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           P +  + +A   + P+    L  ++G Q+ +L + GE   WWK +
Sbjct: 3   PLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGE---WWKAQ 44

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 44.4 bits (105), Expect = 1e-06
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A  +F++     ++L L +G +VIV+ K  +  GWW+G  + +V +F
Sbjct: 20  AYVKFNYMAEREDELSLIKGTKVIVMEKCSD--GWWRGSYNGQVGWF 64

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae} Length = 73

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           AVA +DF P   N+L L +G  V +  K G+  GW   +
Sbjct: 8   AVALYDFEPENDNELRLAEGDIVFISYKHGQ--GWLVAE 44

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            VA  D+  T+  QL   +G ++++L +      WW G+      Y 
Sbjct: 10  FVAIADYAATDETQLSFLRGEKILILRQTTA--DWWWGERAGCCGYI 54

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ... Length = 62

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 10/47 (21%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            +  +D+      +L +K+G  + +L+     K WWK +++ R  + 
Sbjct: 9   VLVLYDYQEKSPRELTVKKGDILTLLNS--TNKDWWKIEVNGRQGFV 53

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 76

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            Q+I  A F+F  T  ++L + +G  + V   E    GWW+G ++ R  +F
Sbjct: 9   HQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEG--GWWEGTLNGRTGWF 57

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 93

 Score = 44.4 bits (105), Expect = 2e-06
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A + F     +++    G  + V  K   + GW  G       +F
Sbjct: 8   YRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWF 54

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae} Length = 59

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           AVA +DF P   N+L L +G  V +  K G+  GW   +
Sbjct: 4   AVALYDFEPENDNELRLAEGDIVFISYKHGQ--GWLVAE 40

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 81

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A   +D+    + +L L     + V S  G    W  G+   +    
Sbjct: 20  ARVLYDYDAANSTELSLLADEVITVFSVVGMDSDWLMGERGNQKGKV 66

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A Length = 58

 Score = 43.3 bits (102), Expect = 2e-06
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           I A   F +     ++L L  G +V V+  E    GWW+G  + ++ +F
Sbjct: 2   IPAFVXFAYVAEREDELSLVXGSRVTVM--EXCSDGWWRGSYNGQIGWF 48

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum} Length = 80

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A A  D+  ++ + LP K+   + +  K+ E   W+ G+++ +   F
Sbjct: 13  ARALKDYNVSDTSLLPFKRNDIITITFKDQEN-KWFMGQLNGKEGSF 58

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A Length = 58

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A + F P +   L LK G +V +L K      W+KG  + R   F
Sbjct: 5   VEALYQFDPQQDGDLGLKPGDKVQLLEKLSP--EWYKGSCNGRTGIF 49

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1 Length = 67

 Score = 43.4 bits (103), Expect = 2e-06
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           I VA +DF  TEA+ L L++G + I+L K      WW+ +
Sbjct: 4   IVVAMYDFQATEAHDLRLERGQEYIILEKNDLH--WWRAR 41

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 62

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A F +  T+   L  ++G  ++VLSK  E   W +G+   +V  F
Sbjct: 8   VEALFSYEATQPEDLEFQEGDIILVLSKVNE--EWLEGESKGKVGIF 52

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} Length = 73

 Score = 43.4 bits (103), Expect = 3e-06
 Identities = 10/47 (21%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            +A +D+      ++ +K+G  + +L+     K WWK ++++R  + 
Sbjct: 8   VLALYDYQEKSPREVTMKKGDILTLLNS--TNKDWWKVEVNDRQGFV 52

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens} Length = 68

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
            +A  DF   +   L  K+G  ++V+ K+ +  GWW  K
Sbjct: 13  YIAVGDFTAQQVGDLTFKKGEILLVIEKKPD--GWWIAK 49

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A Length = 67

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A+ +   C  +   L L+ G  V V        G W+G+++ R   F
Sbjct: 6   AIQKRVPCAYDKTALALEVGDIVKVTRM--NINGQWEGEVNGRKGLF 50

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1 Length = 83

 Score = 43.5 bits (103), Expect = 3e-06
 Identities = 10/48 (20%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           + +A +D+      ++ +K+G  + +L+     K WWK ++++R  + 
Sbjct: 19  LVLALYDYQEKSPREVTMKKGDILTLLNS--TNKDWWKVEVNDRQGFV 64

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           AVA F +    A +L  ++G  + +  +      WW+G+ +      
Sbjct: 13  AVACFAYTGRTAQELSFRRGDVLRLHER--ASSDWWRGEHNGMRGLI 57

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A Length = 58

 Score = 42.6 bits (101), Expect = 3e-06
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A FDF P E  +L  ++G  + V+        WWKG    +   F
Sbjct: 5   VQALFDFDPQEDGELGFRRGDFIHVMDNSDP--NWWKGACHGQTGMF 49

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A Length = 58

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A A +DF   E ++L  + G  V VL        WW G++  ++  F
Sbjct: 4   ARALYDFEALEEDELGFRSGEVVEVLDSSNP--SWWTGRLHNKLGLF 48

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus} Length = 60

 Score = 42.6 bits (101), Expect = 4e-06
 Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A+A+FD+    A +L  K+G  +++  +    + WW+G+ +      
Sbjct: 9   AIAKFDYVGRSARELSFKKGASLLLYHR--ASEDWWEGRHNGIDGLV 53

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A Length = 58

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A FDF P E+ +L  K+G  + +++K+     WW+G+++ R   F
Sbjct: 5   VQALFDFNPQESGELAFKRGDVITLINKDDP--NWWEGQLNNRRGIF 49

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 43.2 bits (102), Expect = 4e-06
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A +DF   E N+L  K G  +IVL        WWKG+    +  F
Sbjct: 20  VRALYDFEAVEDNELTFKHGEIIIVLDDSDA--NWWKGENHRGIGLF 64

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.7 bits (101), Expect = 4e-06
 Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQ-KGWWKGKIDERVSYF 244
             A +D+     ++L   +G  + +L+KE +   G+W+G+ + R+  F
Sbjct: 11  VKALYDYEGQTDDELSFPEGAIIRILNKENQDDDGFWEGEFNGRIGVF 58

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens} Length = 65

 Score = 42.6 bits (101), Expect = 4e-06
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A  +FDF      +L L++G  V +  +  +   W +G+   R+  F
Sbjct: 4   ARLKFDFQAQSPKELTLQKGDIVYIHKEVDK--NWLEGEHHGRLGIF 48

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A Length = 65

 Score = 42.6 bits (101), Expect = 4e-06
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 191 LPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           L  ++      F++ P   ++L LK G  + +  +  E  GWW G ++ ++  F
Sbjct: 3   LGSKKRQCKVLFEYIPQNEDELELKVGDIIDINEEVEE--GWWSGTLNNKLGLF 54

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A Length = 67

 Score = 42.2 bits (100), Expect = 5e-06
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
             VA +D+ P  AN L L++G +  +L +      WW+ +
Sbjct: 10  KVVALYDYMPMNANDLQLRKGDEYFILEESNL--PWWRAR 47

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 80

 Score = 42.9 bits (101), Expect = 5e-06
 Identities = 9/46 (19%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 199 VAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           +    +   + +++    G +V VL K+    GWW  +  E   + 
Sbjct: 12  MTCSAYQKVQDSEISFPAGVEVQVLEKQES--GWWYVRFGELEGWA 55

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A Length = 73

 Score = 42.4 bits (100), Expect = 5e-06
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
              +F   P + + L LK+G  + ++SK     G W G ++ +V  F
Sbjct: 14  VHTDFTPSPYDTDSLKLKKGDIIDIISKPPM--GTWMGLLNNKVGTF 58

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A Length = 64

 Score = 42.2 bits (100), Expect = 5e-06
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            Q++  A+F+F  T  ++L   +G  + V   E    GWW+G  + R  +F
Sbjct: 5   SQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEG--GWWEGTHNGRTGWF 53

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 68

 Score = 42.2 bits (100), Expect = 5e-06
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
               F + P   ++L LK G  + V+ +  E  GWW+G ++ +   F
Sbjct: 10  CQVAFSYLPQNDDELELKVGDIIEVVGEVEE--GWWEGVLNGKTGMF 54

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A Length = 86

 Score = 42.8 bits (101), Expect = 6e-06
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
             II VA +D+       L  ++G Q++VL + GE   WWK +
Sbjct: 24  EDIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGE---WWKAR 63

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 98

 Score = 42.8 bits (101), Expect = 7e-06
 Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            +A +D+     ++L   +G  + V++K+     WW+G+I+     F
Sbjct: 37  VIAMYDYAANNEDELSFSKGQLINVMNKDDP--DWWQGEINGVTGLF 81

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus} Length = 93

 Score = 42.9 bits (101), Expect = 7e-06
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQ--KGWWKGKID 238
           ++A AE+DF      ++  + G  + +  KE +   +GW    +D
Sbjct: 18  VVARAEYDFVAVSDEEISFRAGDMLNLALKEQQPKVRGWLLASLD 62

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A Length = 59

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A+F+F  T  ++L   +G  + V   E    GWW+G  + R  +F
Sbjct: 7   VRAKFNFQQTNEDELSFSKGDVIHVTRVEEG--GWWEGTHNGRTGWF 51

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens} Length = 65

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
               F++ P   ++L LK G  + +  +  E  GWW G ++ ++  F
Sbjct: 4   CKVLFEYIPQNEDELELKVGDIIDINEEVEE--GWWSGTLNNKLGLF 48

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A + F P   ++L  ++G  + +         WWKG    R    
Sbjct: 10  FRALYTFEPRTPDELYFEEGDIIYITDMSDT--NWWKGTSKGRTGLI 54

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 42.0 bits (99), Expect = 8e-06
 Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           AVA +D+     +++       +  +    +  GWW+G    R   F
Sbjct: 20  AVALYDYQAAGDDEISFDPDDIITNIEMIDD--GWWRGVCKGRYGLF 64

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A Length = 67

 Score = 41.8 bits (99), Expect = 9e-06
 Identities = 8/43 (18%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
            ++I +A++D+   +  +L +K+  ++ +L        WW+ +
Sbjct: 3   EEVIVIAKWDYTAQQDQELDIKKNERLWLLDDSKT---WWRVR 42

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 41.8 bits (99), Expect = 9e-06
 Identities = 10/47 (21%), Positives = 15/47 (31%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
               F F P    +L +  G  V VL K  +   W     + +    
Sbjct: 10  HRVLFGFVPETKEELQVMPGNIVFVLKKGND--NWATVMFNGQKGLV 54

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A A +D       +L  K G  + VL      K WW G+ID+   +F
Sbjct: 13  AEAVWDHVTMANRELAFKAGDVIKVLDA--SNKDWWWGQIDDEEGWF 57

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 85

 Score = 42.0 bits (99), Expect = 1e-05
 Identities = 7/43 (16%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
            + + +A +D+   +  +L L++  +  +L        WW+ +
Sbjct: 18  EETVVIALYDYQTNDPQELALRRNEEYCLLDSSEIH--WWRVQ 58

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A Length = 77

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 7/43 (16%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
            + + +A +D+   +  +L L+   +  +L     +  WW+ +
Sbjct: 19  EETLVIALYDYQTNDPQELALRCDEEYYLLDS--SEIHWWRVQ 59

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens} Length = 72

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 9/42 (21%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           +++ VA+FD+   +  +L +K+  ++ +L        WW+ +
Sbjct: 7   EVVVVAKFDYVAQQEQELDIKKNERLWLLDDSKS---WWRVR 45

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic} Length = 73

 Score = 41.2 bits (97), Expect = 1e-05
 Identities = 8/47 (17%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A     +      ++ +K+G  + +L+   +   WWK ++++R  + 
Sbjct: 3   APPLPPY-SAGGREVTMKKGDILTLLNSTNK--DWWKVEVNDRQGFV 46

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A 1qwf_A 1prl_C ... Length = 84

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           + VA +D+  T    L   +G +  +L        WW+ +
Sbjct: 8   LFVALYDYNATRWTDLSFHKGEKFQILEFGPG--DWWEAR 45

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus} Length = 60

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 7/47 (14%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A + +   + ++L       + ++ ++    GWW G++  +   F
Sbjct: 8   CKALYAYDAQDTDELSFNANDIIDIIKEDPS--GWWTGRLRGKQGLF 52

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score = 43.8 bits (103), Expect = 2e-05
 Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 2/48 (4%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
              A  D+  T  +++ L  G  V V+ K     GWW  ++  +  + 
Sbjct: 13  TYRAIADYEKTSGSEMALSTGDVVEVVEKSES--GWWFCQMKAKRGWI 58

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            VA   +   E +++ L +G  V V+ K  +  GWW  + D+   YF
Sbjct: 84  YVAIKAYTAVEGDEVSLLEGEAVEVIHKLLD--GWWVIRKDDVTGYF 128

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 7/43 (16%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDER 240
            + + +    +  +L  ++G  V +L      K W++ K    
Sbjct: 20  CITKCEHTRPKPGELAFRKGDVVTILEACEN-KSWYRVKHHTS 61

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} PDB: 2d1x_A Length = 65

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A+A +D+     +++       +  +    +  GWW+G    R   F
Sbjct: 12  AIALYDYQAAGDDEISFDPDDIITNIEMIDD--GWWRGVCKGRYGLF 56

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus} Length = 73

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 192 PFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           P  Q    A +DF P    +L  ++G  + + ++  E   W++G +  +  +F
Sbjct: 10  PLDQPSCKALYDFEPENDGELGFREGDLITLTNQIDE--NWYEGMLHGQSGFF 60

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens} Length = 92

 Score = 41.7 bits (98), Expect = 2e-05
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
               F + P   ++L LK G  + V+ +  E  GWW+G ++ +   F
Sbjct: 21  CQVAFSYLPQNDDELELKVGDIIEVVGEVEE--GWWEGVLNGKTGMF 65

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A Length = 108

 Score = 42.1 bits (99), Expect = 2e-05
 Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 192 PFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERV 241
           P   + A+  +DF   +A++L    G  + + +       W+  K   R+
Sbjct: 2   PLGSLYAIVLYDFKAEKADELTTYVGENLFICAHHNC--EWFIAKPIGRL 49

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 41.3 bits (97), Expect = 2e-05
 Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
                 D+   + +    ++G ++ V+S EG    WWK  
Sbjct: 19  FLAVLSDYPSPDISPPIFRRGEKLRVISDEGG---WWKAI 55

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1 Length = 71

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 9/41 (21%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID 238
            +A+++F  T    LP  +G  + +++   +   W+K K  
Sbjct: 14  CIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDP-NWYKAKNK 53

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D Length = 466

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            + A A +D    +  +L  K G  + V+      + WW G++ +   +F
Sbjct: 30  VVCAEALWDHVTMDDQELGFKAGDVIEVMDA--TNREWWWGRVADGEGWF 77

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A Length = 71

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 192 PFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFF 245
           P  +    A FD+     ++L   +   +  + K+    GWW+G    +   +F
Sbjct: 3   PTFKCAVKALFDYKAQREDELTFIKSAIIQNVEKQEG--GWWRGDYGGKKQLWF 54

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             +  A + F   + ++L L++G  VI+  K+ E  GWW G ++ +  +F
Sbjct: 7   GRLCKALYSFQARQDDELNLEKGDIVIIHEKKEE--GWWFGSLNGKKGHF 54

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens} Length = 58

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 2/51 (3%)

Query: 194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           +  +  A + F P   ++L  ++G  + +         WWKG    R    
Sbjct: 2   QVKVFRALYTFEPRTPDELYFEEGDIIYITDMSDT--NWWKGTSKGRTGLI 50

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus} Length = 68

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 9/47 (19%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A A  ++       L   +G  +++  +  E   W++G+I+     F
Sbjct: 10  AKALCNYRGKNPGDLKFNKGDVILLRRQLDE--NWYQGEINGVSGIF 54

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens} Length = 90

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
            II VA +D+     + L  ++G Q++VL + GE   WWK +
Sbjct: 3   DIIVVALYDYVSWSPDDLSFQKGDQMVVLEESGE---WWKAR 41

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 69

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFF 245
                A +D+    +++L   +G  +  +SKE    GWWKG    R+  +F
Sbjct: 7   GRTVKALYDYKAKRSDELTFCRGALIHNVSKEPG--GWWKGDYGTRIQQYF 55

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens} Length = 70

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 10/41 (24%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID 238
           A+A+F+F      ++  ++G ++ +L +  E   W++G+I 
Sbjct: 10  AIAKFNFNGDTQVEMSFRKGERITLLRQVDE--NWYEGRIP 48

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A Length = 92

 Score = 41.0 bits (96), Expect = 3e-05
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 192 PFRQIIAVAEFDFCPTEANQ-LPLKQGCQVIVLSK---EGEQKGWWKGKI-DERVSYF 244
           P +   A A +DF P      + LK+G  + +LSK    G    WWK +  +  + Y 
Sbjct: 11  PSKLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYI 68

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 74

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 3/53 (5%)

Query: 192 PFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
               + A A   +   + N L   +   + VL +   Q+ WW G++     +F
Sbjct: 7   GVENLKAQALCSWTAKKDNHLNFSKHDIITVLEQ---QENWWFGEVHGGRGWF 56

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens} Length = 89

 Score = 41.0 bits (96), Expect = 3e-05
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQK---GWWKGKI-DERVSYF 244
             A FD+      +L L++G +V VLS++       GWW G++   RV  F
Sbjct: 32  WTAVFDYEAAGDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVF 82

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A Length = 58

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            I   A +D+     ++L  K+G  +IV  K+    GWW+G+++ +  + 
Sbjct: 3   GIQVKALYDYDAQTGDELTFKEGDTIIVHQKDPA--GWWEGELNGKRGWV 50

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A Length = 73

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
                A +DF P    +L  K+G  + + ++  E   W++G +     +F
Sbjct: 7   GPCCRALYDFEPENEGELGFKEGDIITLTNQIDE--NWYEGMLHGHSGFF 54

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens} Length = 69

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A +D+     ++L L  G  + V+ +  +  GWW  + + +  + 
Sbjct: 11  YRALYDYTAQNPDELDLSAGDILEVILEGED--GWWTVERNGQRGFV 55

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A Length = 68

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 3/40 (7%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
             +  +DF    +++L +KQ   + VL    +   WWK +
Sbjct: 10  WVLCNYDFQARNSSELSVKQRDVLEVLDDSRK---WWKVR 46

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A Length = 62

 Score = 40.1 bits (94), Expect = 3e-05
 Identities = 9/42 (21%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID 238
           + +A +D+      ++ +K+G  + +L+     K WWK +++
Sbjct: 23  LVLALYDYQEKSPREVTMKKGDILTLLNS--TNKDWWKVEVN 62

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A Length = 79

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 7/46 (15%), Positives = 18/46 (39%), Gaps = 2/46 (4%)

Query: 191 LPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           +     +  A +D+     + L   +G +  +L+       WW+ +
Sbjct: 1   MVQISTLFEALYDYEARTEDDLSFHKGEKFQILNSSEG--DWWEAR 44

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A Length = 57

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDE-RVSYF 244
             A FDF   +   LP K+G  + +  K  E   WW  +  E +    
Sbjct: 4   VRALFDFNGNDEEDLPFKKGDILRIRDKPEE--QWWNAEDSEGKRGMI 49

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A Length = 69

 Score = 40.0 bits (94), Expect = 4e-05
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 194 RQIIAVAEFDFCPT-EANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           +     A +DF  +  +++LPLK+G  V +   E    GW   K
Sbjct: 1   KDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPS--GWSLAK 42

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 40.1 bits (94), Expect = 4e-05
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
             VA FD+    A  L  + G ++ VL    E  GWW  +
Sbjct: 9   YFVALFDYQARTAEDLSFRAGDKLQVLDTSHE--GWWLAR 46

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 40.0 bits (94), Expect = 4e-05
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQ-KGWWKGKIDERVSYF 244
           A A +D CP  +++L   +G  + +L +   + +GWWK  +  R    
Sbjct: 10  ARALYDNCPDCSDELAFSRGDILTILEQHVPESEGWWKCLLHGRQGLA 57

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae} Length = 54

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 8/45 (17%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 200 AEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A + +     +++ +  G  + V+  +    GW  G+ D     F
Sbjct: 5   AIYAYEAQGDDEISIDPGDIITVIRGDDGS-GWTYGECDGLKGLF 48

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A Length = 60

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 8/40 (20%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
            A +++DF    +++L + +   + +L    +   WWK +
Sbjct: 3   YAKSKYDFVARNSSELSVMKDDVLEILDDRRQ---WWKVR 39

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A Length = 60

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 10/43 (23%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDER 240
            + ++DF     ++L +K G +V +L  + + K WW  ++ + 
Sbjct: 5   GIVQYDFMAESQDELTIKSGDKVYILDDK-KSKDWWMCQLVDS 46

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 40.1 bits (94), Expect = 5e-05
 Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDER 240
           AVA++ F      +L  ++G  + ++ K  E   W++G+I   
Sbjct: 20  AVAQYTFKGDLEVELSFRKGEHICLIRKVNE--NWYEGRITGT 60

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A Length = 60

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 193 FRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            + + A A FDF      +L  K G  VI L      K W +G +      F
Sbjct: 2   IKHMRAEALFDFTGNSKLELNFKAG-DVIFLLSRIN-KDWLEGTVRGATGIF 51

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 40.0 bits (94), Expect = 5e-05
 Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            VA +D+   + ++L  ++G  + V+ K  +  GW++G ++     F
Sbjct: 20  VVAIYDYTKDKEDELSFQEGAIIYVIKKNDD--GWYEGVMNGVTGLF 64

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 2/48 (4%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
                +DF    AN+L + +   + VL    +   W       +  Y 
Sbjct: 9   YVKILYDFTARNANELSVLKDEVLEVLEDGRQ--WWKLRSRSGQAGYV 54

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens} Length = 68

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           Q      +DF P    +L  K+G  + + ++  E   W++G I     +F
Sbjct: 3   QPCCRGLYDFEPENQGELGFKEGDIITLTNQIDE--NWYEGMIHGESGFF 50

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens} Length = 67

 Score = 39.2 bits (92), Expect = 6e-05
 Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 4/51 (7%)

Query: 196 IIAVAEFDFCPT--EANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           I A       P   +   L L+ G  V V        G W+G+ + +  +F
Sbjct: 7   IYARVIQKRVPNAYDKTALALEVGELVKVTKINVS--GQWEGECNGKRGHF 55

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens} Length = 86

 Score = 39.8 bits (93), Expect = 6e-05
 Identities = 8/40 (20%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           I +A++D+   +  +L +K+  ++ +L        WW+ +
Sbjct: 33  IVIAKWDYTAQQDQELDIKKNERLWLLDDSKT---WWRVR 69

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A Length = 463

 Score = 43.0 bits (101), Expect = 6e-05
 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 12/80 (15%)

Query: 91  FVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMD 150
           F G + RE A  LL   A+G+YL+R   + P       Y L+L+   + ++ ++Y     
Sbjct: 54  FHGMISREAADQLLI-VAEGSYLIRESQRQPG-----TYTLALRFGSQTRNFRLYYD--- 104

Query: 151 GVPQYFLSQSRYFRSIVELI 170
              ++F+ + R F SI +L+
Sbjct: 105 --GKHFVGEKR-FESIHDLV 121

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae} Length = 71

 Score = 39.6 bits (93), Expect = 6e-05
 Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
             + ++DF     ++L +K G +V +L  + + K WW  +
Sbjct: 8   RGIVQYDFMAESQDELTIKSGDKVYILDDK-KSKDWWMCQ 46

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 39.3 bits (92), Expect = 7e-05
 Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 8/53 (15%)

Query: 199 VAEFDFCPTEANQ-------LPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           +A  D+ P +          L L+ G  V+V     +Q G++ G++       
Sbjct: 11  IAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQ-GFYYGELGGHRGLV 62

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1 Length = 65

 Score = 39.1 bits (92), Expect = 7e-05
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDE-RVSYF 244
             A FDF   +   LP K+G  + +  K  E   WW  +  E +    
Sbjct: 6   VRALFDFNGNDEEDLPFKKGDILRIRDKPEE--QWWNAEDSEGKRGMI 51

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A 3h0f_A* Length = 73

 Score = 39.2 bits (92), Expect = 7e-05
 Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           + VA +D+     + L   +G +  +L+    +  WW+ +
Sbjct: 17  LFVALYDYEAITEDDLSFHKGEKFQILNS--SEGDWWEAR 54

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus} Length = 109

 Score = 40.1 bits (94), Expect = 9e-05
 Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           I VA +D+       L  K+G +  +++    +  WW+ +
Sbjct: 29  IFVALYDYEARTTEDLSFKKGERFQIINN--TEGDWWEAR 66

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 72

 Score = 39.2 bits (92), Expect = 9e-05
 Identities = 8/47 (17%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A A +       ++L    G  V       ++ GW +G ++ +    
Sbjct: 13  AKALYACKAEHDSELSFTAG-TVFDNVHPSQEPGWLEGTLNGKTGLI 58

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A Length = 61

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 2/48 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFF 245
             A FD+     ++L   +   +  + K+    GWW+G    +   +F
Sbjct: 6   VKALFDYKAQREDELTFTKSAIIQNVEKQDG--GWWRGDYGGKKQLWF 51

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A Length = 67

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 10/41 (24%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID 238
           A+A+F+F      ++  ++G ++ +L +  E   W++G+I 
Sbjct: 9   AIAKFNFNGDTQVEMSFRKGERITLLRQVDE--NWYEGRIP 47

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens} Length = 79

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A A FDF      +L  K G  + +LS+  +   W +G +      F
Sbjct: 21  AEALFDFTGNSKLELNFKAGDVIFLLSRINK--DWLEGTVRGATGIF 65

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 8/54 (14%)

Query: 198 AVAEFDFCPTEANQ-------LPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            VA +D+ P E++        L    G  + V  +  E  G++ G+++ +    
Sbjct: 10  MVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDED-GFYYGELNGQKGLV 62

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens} Length = 119

 Score = 39.7 bits (92), Expect = 1e-04
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 3/47 (6%)

Query: 194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDER 240
           ++   VA ++F  + A QL L+ G  V +    G+   W++G + + 
Sbjct: 58  KERHGVAIYNFQGSGAPQLSLQIGDVVRIQETCGD---WYRGYLIKH 101

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A Length = 58

 Score = 38.0 bits (89), Expect = 1e-04
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 198 AVAEFDFCPT-EANQLPLKQGCQVIVLSKEGEQKGWWKGKI 237
             A +DF  +   ++LPLK+G  + +  +E    GW  GK+
Sbjct: 3   FEAAYDFPGSGSPSELPLKKGDVIYITREEPS--GWSLGKL 41

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D Length = 60

 Score = 38.0 bits (89), Expect = 1e-04
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID 238
             A +D+   E ++L  K G ++  L +E EQ GW +G++D
Sbjct: 6   VRALYDYDGQEQDELSFKAGDELTKLGEEDEQ-GWCRGRLD 45

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens} Length = 118

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 16/95 (16%)

Query: 90  WFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTD----EKVKHMKV 144
               ++ R +A  LLER    G  LLR     P+       +++ +        V+H KV
Sbjct: 23  SCFLKVSRLEAQLLLERYPECGNLLLR-----PSGDGADGVSVTTRQMHNGTHVVRHYKV 77

Query: 145 YEKEMDGVPQYFLSQSR--YFRSIVELICCYERNS 177
             +     P+Y +   +     S+  ++  +  ++
Sbjct: 78  KREG----PKYVIDVEQPFSCTSLDAVVNYFVSHT 108

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 69

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 198 AVAEFDFCPTEANQ-LPLKQGCQVIVLSKE---GEQKGWWKGKI-DERVSYF 244
           A A +DF P      + LK+G  + +LSK+   G    WWK +  +  + Y 
Sbjct: 10  ARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYI 61

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A Length = 64

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 6/40 (15%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI 237
             A +D+   + +++  + G  ++ +    +  GW  G +
Sbjct: 9   YRAMYDYSAQDEDEVSFRDGDYIVNVQPIDD--GWMYGTV 46

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens} Length = 341

 Score = 41.1 bits (95), Expect = 2e-04
 Identities = 17/108 (15%), Positives = 34/108 (31%), Gaps = 2/108 (1%)

Query: 137 EKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI 196
           + +  + V+    + V  +F         + + +      +     +             
Sbjct: 116 KSLLSLPVWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVKSVSPQGNSVDRMAAP 175

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            A A FDF      +L  K G  + +LS+    K W +G +      F
Sbjct: 176 RAEALFDFTGNSKLELNFKAGDVIFLLSRI--NKDWLEGTVRGATGIF 221

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A Length = 68

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 190 QLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI 237
           ++PF+    VA+F +     + L  ++  ++IV S E     W+ G+ 
Sbjct: 5   EVPFK---VVAQFPYKSDYEDDLNFEKDQEIIVTSVEDA--EWYFGEY 47

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 78

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 10/47 (21%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A A  DF   + ++L  ++   + ++S++ E    W G+++    +F
Sbjct: 10  AKALLDFERHDDDELGFRKNDIITIISQKDE--HCWVGELNGLRGWF 54

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 80

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 192 PFRQIIAVAEFDFCPTEANQ-LPLKQGCQVIVLSK---EGEQKGWWKGKI-DERVSYF 244
           P +   A A +DF P      + LK+G  + +LSK    G    WWK +  +  + Y 
Sbjct: 11  PSKLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYI 68

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens} Length = 68

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 3/40 (7%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
                ++F      +L + QG ++ VL        WW  K
Sbjct: 9   KMQVLYEFEARNPRELTVVQGEKLEVLDHSKR---WWLVK 45

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 5/39 (12%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
               + +  ++ ++L +++   + V+   G+ + W K +
Sbjct: 16  CKVVYSYKASQPDELTIEEHEVLEVIED-GDMEDWVKAR 53

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 6/39 (15%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
            VA + F  +    + + +G  + ++ ++ +  GW + +
Sbjct: 10  CVAIYHFEGSSEGTISMAEGEDLSLMEED-KGDGWTRVR 47

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus} Length = 70

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK 236
           + VA   +      +L L++G  + VL K  +  GW KG 
Sbjct: 9   MFVALHTYSAHRPEELDLQKGEGIRVLGKYQD--GWLKGL 46

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens} Length = 69

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFF 245
            VA +D+    +++L + +G  + V  K+ E   WW G I +    +F
Sbjct: 9   VVALYDYTANRSDELTIHRGDIIRVFFKDNE--DWWYGSIGKGQEGYF 54

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens} Length = 595

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 11/106 (10%)

Query: 90  WFVGEMGREKATSLL-EREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           WF  ++    A +LL  R   G++L R     P+  N+  ++LS++  ++V H+++    
Sbjct: 4   WFHRDLSGLDAETLLKGRGVHGSFLAR-----PSRKNQGDFSLSVRVGDQVTHIRI---- 54

Query: 149 MDGVPQYFLSQSRYFRSIVELICCY-ERNSLIENFIGLNVRLQLPF 193
            +    Y L     F ++ EL+  Y ++  ++++  G  + L+ P 
Sbjct: 55  QNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPL 100

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A* Length = 532

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 11/106 (10%)

Query: 90  WFVGEMGREKATSLL-EREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           WF  ++    A +LL  R   G++L R     P+  N+  ++LS++  ++V H+++    
Sbjct: 4   WFHRDLSGLDAETLLKGRGVHGSFLAR-----PSRKNQGDFSLSVRVGDQVTHIRI---- 54

Query: 149 MDGVPQYFLSQSRYFRSIVELICCY-ERNSLIENFIGLNVRLQLPF 193
            +    Y L     F ++ EL+  Y ++  ++++  G  + L+ P 
Sbjct: 55  QNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPL 100

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A Length = 58

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID 238
           A AE+D+   E N+L   +  ++I +    +   WW G+++
Sbjct: 3   ATAEYDYDAAEDNELTFVENDKIINIEFVDD--DWWLGELE 41

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 97

 Score = 37.9 bits (88), Expect = 4e-04
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 9/56 (16%)

Query: 197 IAVAEFDFCPTEANQ--------LPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           I VA FD+ P   +         LP K+G  + V   +    G+++G+   R+   
Sbjct: 19  IFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDAD-GFYRGETCARLGLI 73

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A Length = 65

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI 237
           + +A +D+      ++ +K+G  + +L+     K WWK ++
Sbjct: 3   LVLALYDYQEKSPREVTMKKGDILTLLNS--TNKDWWKVEV 41

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 70

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI 237
             A + + P   ++L L++G +V V+ +  +  GW+ G  
Sbjct: 10  YRAMYQYRPQNEDELELREGDRVDVMQQCDD--GWFVGVS 47

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens} Length = 72

 Score = 37.0 bits (86), Expect = 5e-04
 Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 2/46 (4%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVS 242
             V  +DF      +L  + G    V  KE +   WW   +DE   
Sbjct: 12  KYVGLWDFKSRTDEELSFRAGDVFHVARKEEQ--WWWATLLDEAGG 55

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A Length = 76

 Score = 36.9 bits (86), Expect = 5e-04
 Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID 238
               +D      ++L   +G  +IV  +E +   WW G I+
Sbjct: 13  VKTIYDCQADNDDELTFIEGEVIIVTGEEDQ--EWWIGHIE 51

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	272
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	100.0
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	100.0
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	100.0
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	100.0
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	100.0
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	99.96
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	99.94
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	99.93
2lnw_A	122	VAV-2, guanine nucleotide exchange factor VAV2; si	99.93
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	99.92
2dly_A	121	FYN-related kinase; BRK family kinase, structural	99.92
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	99.92
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	99.92
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	99.92
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.91
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	99.91
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	99.91
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	99.91
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	99.91
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	99.91
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	99.91
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.91
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	99.91
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	99.9
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	99.9
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	99.9
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.9
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	99.9
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	99.9
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.9
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	99.89
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	99.89
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	99.89
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	99.89
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	99.89
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	99.89
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	99.89
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	99.89
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	99.89
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	99.89
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.89
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.89
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.89
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	99.89
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	99.89
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.89
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	99.89
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	99.89
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	99.88
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.88
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	99.87
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	99.87
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	99.87
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.87
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	99.87
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.87
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	99.87
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	99.87
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	99.87
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	99.86
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	99.85
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	99.85
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	99.85
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.83
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.83
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	99.83
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.83
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.83
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	99.83
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	99.82
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	99.82
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.8
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	99.79
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.78
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.78
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	99.76
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.69
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.69
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.68
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	99.68
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	99.65
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	99.59
2lx7_A	60	GAS-7, growth arrest-specific protein 7; structura	99.58
2lj0_A	65	Sorbin and SH3 domain-containing protein 1; R85FL,	99.58
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	99.53
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	99.52
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	99.52
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	99.52
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	99.52
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	99.51
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	99.51
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	99.51
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	99.51
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	99.5
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	99.5
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	99.5
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens}	99.5
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	99.5
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.5
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	99.5
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	99.5
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	99.5
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	99.49
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	99.49
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	99.49
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	99.49
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	99.49
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	99.49
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	99.48
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	99.48
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	99.48
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	99.47
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	99.47
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	99.47
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	99.47
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	99.47
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	99.47
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	99.47
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	99.47
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	99.46
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	99.46
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	99.46
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	99.46
3u23_A	65	CD2-associated protein; structural genomics, struc	99.46
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	99.46
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	99.46
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.46
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	99.46
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	99.46
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	99.46
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	99.46
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	99.46
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	99.45
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	99.45
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	99.45
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	99.45
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	99.45
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.44
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	99.44
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	99.44
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	99.44
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	99.44
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	99.44
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	99.44
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	99.44
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	99.44
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	99.44
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	99.44
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	99.44
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	99.44
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	99.44
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.44
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	99.43
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	99.43
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	99.43
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	99.43
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	99.43
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	99.43
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	99.43
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	99.43
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	99.43
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	99.43
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	99.43
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.43
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	99.43
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.43
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	99.43
4glm_A	72	Dynamin-binding protein; SH3 domain, DNMBP, struct	99.43
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	99.43
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	99.42
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	99.42
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	99.42
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	99.42
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	99.42
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	99.42
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	99.42
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	99.42
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	99.42
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	99.42
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	99.41
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	99.41
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	99.41
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	99.41
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	99.41
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	99.41
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.41
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	99.41
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	99.41
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	99.41
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	99.41
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	99.41
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	99.41
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	99.41
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	99.4
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	99.4
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	99.4
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	99.4
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	99.4
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	99.4
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	99.39
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	99.39
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	99.39
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	99.39
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	99.39
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	99.39
1i07_A	60	Epidermal growth factor receptor kinase substrate	99.39
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	99.39
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	99.39
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	99.39
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.39
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	99.39
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	99.38
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	99.38
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	99.38
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.38
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	99.37
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	99.37
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	99.37
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	99.37
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	99.37
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	99.37
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	99.37
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	99.37
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	99.37
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	99.37
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	99.36
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	99.36
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	99.36
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	99.36
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	99.35
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	99.35
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	99.34
1wxb_A	68	Epidermal growth factor receptor pathway substrate	99.34
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	99.33
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	99.32
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	99.32
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	99.32
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	99.31
2m0y_A	74	Dedicator of cytokinesis protein 1; apoptosis; NMR	99.31
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	99.3
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	99.3
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	99.3
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	99.3
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	99.29
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	99.29
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	99.28
1awj_A	77	ITK; transferase, regulatory intramolecular comple	99.27
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	99.26
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	99.24
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	99.22
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	99.21
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	99.2
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.13
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	99.13
3jv3_A	283	Intersectin-1; SH3 domain, DH domain, guanine nucl	99.12
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	99.09
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	99.06
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.06
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	99.04
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	99.02
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	99.0
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	98.96
1u3o_A	82	Huntingtin-associated protein-interacting protein;	98.96
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	98.94
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	98.94
1v1c_A	71	Obscurin; muscle, sarcomere, adapter, myogenesis,	98.94
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	98.94
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	98.94
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	98.92
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.91
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	98.41
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	98.87
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	98.82
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	98.81
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	98.78
1kjw_A	295	Postsynaptic density protein 95; protein-protein i	98.78
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	98.78
3pvl_A	655	Myosin VIIA isoform 1; protein complex, novel fold	98.65
1ri9_A	102	FYN-binding protein; SH3-like, helically extended,	98.47
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	98.44
4dey_A	337	Voltage-dependent L-type calcium channel subunit;	98.34
2gtj_A	96	FYN-binding protein; SH3, redox, signaling protein	98.24
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	98.22
3tsz_A	391	Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffol	98.08
1ug1_A	92	KIAA1010 protein; structural genomics, SH3 domain,	98.06
3kfv_A	308	Tight junction protein ZO-3; structural genomics c	98.06
2xkx_A	721	Disks large homolog 4; structural protein, scaffol	98.05
1uur_A	473	Stata protein, STAT protein; transcription activat	97.99
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	97.98
2enz_A	65	NPKC-theta, protein kinase C theta type; zinc bind	97.98
2yuu_A	83	NPKC-delta, protein kinase C delta type; metal bin	97.91
3shw_A	468	Tight junction protein ZO-1; PDZ-SH3-GUK supramodu	97.9
1ptq_A	50	Protein kinase C delta type; phosphotransferase; 1	97.89
2db6_A	74	SH3 and cysteine rich domain 3; STAC3, C1 domain,	97.84
2enn_A	77	NPKC-theta, protein kinase C theta type; zinc bind	97.82
3uej_A	65	NPKC-delta, protein kinase C delta type; proteine	97.79
1y8f_A	66	UNC-13 homolog A, MUNC13-1; cysteine-rich domain,	97.73
2eli_A	85	Protein kinase C alpha type; PKC-alpha, PKC-A, str	97.69
2xp1_A	178	SPT6; transcription, IWS1, histone chaperone, mRNA	97.67
3tvt_A	292	Disks large 1 tumor suppressor protein; DLG, SRC-h	97.64
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	97.49
2row_A	84	RHO-associated protein kinase 2; ATP-binding, coil	97.34
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	97.32
3ky9_A	587	Proto-oncogene VAV; calponin homology domain, DBL	97.31
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	97.08
1faq_A	52	RAF-1; transferase, serine/threonine-protein kinas	97.01
2fnf_X	72	Putative RAS effector NORE1; zinc, signal transduc	96.94
1y1u_A	585	Signal transducer and activator of transcription;	96.86
1kbe_A	49	Kinase suppressor of RAS; KSR, cysteine-rich domai	96.8
1rfh_A	59	RAS association (ralgds/AF-6) domain family 5; zin	96.63
1yvl_A	683	Signal transducer and activator of transcription 1	96.59
4b6d_A	61	RAC GTPase-activating protein 1; signaling protein	96.45
3or8_A	197	Transcription elongation factor SPT6; SH2, CTD bin	96.34
1bg1_A	596	Protein (transcription factor STAT3B); protein-DNA	96.07
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	95.93
1bf5_A	575	Signal transducer and activator of transcription 1	95.87
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	95.63
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	95.59
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	95.35
3psi_A	1219	Transcription elongation factor SPT6; nucleus; 3.3	95.22
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	95.15
3bux_B	329	E3 ubiquitin-protein ligase CBL; TKB, signal trans	95.1
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	94.72
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	94.31
3op0_A	323	Signal transduction protein CBL-C; structural geno	94.27
2kt8_A	76	Probable surface protein; SH3 family, structural g	94.15
2krs_A	74	Probable enterotoxin; all beta, SH3, ENTD, CPF_058	93.18
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	93.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	92.03
2kq8_A	70	Cell WALL hydrolase; GFT protein structure, NESG,	92.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	91.45
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	91.33
4aoj_A	329	High affinity nerve growth factor receptor; transf	90.82
2ct0_A	74	Non-SMC element 1 homolog; ring domain, structural	90.58
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	90.35
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	88.46
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	86.75
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	85.9
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	84.9
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	82.08
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	82.06
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	80.91
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	80.88
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	80.52
3h8z_A	128	FragIle X mental retardation syndrome-related Pro;	80.27

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=100.00  E-value=3.2e-38  Score=274.59  Aligned_cols=166  Identities=21%  Similarity=0.375  Sum_probs=140.3

Q ss_pred             ceeecCccCcCCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCc
Q psy3210          73 EWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGV  152 (272)
Q Consensus        73 g~~P~~~~~~~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~  152 (272)
                      |++|+|+   .+++.++||||.|+|++||++|...++|+||||+|++.     ++.|+|||+.+++|+||+|...+++++
T Consensus         1 g~i~~~~---~~l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~~~~   72 (230)
T 2dvj_A            1 GAMAGNF---DSEERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTS-----PGDYVLSVSENSRVSHYIINSSGPRPP   72 (230)
T ss_dssp             --CCSCC---CSSSSSSSCCSSCCTTHHHHHHTTSSSSCBEEECCSSC-----TTSCEEECCCSSSCCCEECBCCCSCCS
T ss_pred             CCcCccc---ccccCCCcccCCCCHHHHHHHhcCCCCceEEEEeCCCC-----CCCEEEEEEECCEEEEEEEEeCCCCcc
Confidence            6889998   78999999999999999999998888999999999744     589999999999999999987653210


Q ss_pred             --------------ceEEeecccccchhhhhhhhhhcccccccccccccccccccee--------------eeeeeeccC
Q psy3210         153 --------------PQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ--------------IIAVAEFDF  204 (272)
Q Consensus       153 --------------~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~--------------~~~~alydf  204 (272)
                                    ..|.+. ...|+||.+||+||+.+++.      .+.|..|+.+              ..++|+|||
T Consensus        73 ~~~~~~~~~~g~~~~~~~~~-~~~F~sl~~LV~~y~~~~l~------~~~L~~Pv~~~~~~s~~~L~~~~~~~~~al~dy  145 (230)
T 2dvj_A           73 VPPSPAQPPPGVSPSRLRIG-DQEFDSLPALLEFYKIHYLD------TTTLIEPVSRSRQGSGVILRQEEAEYVRALFDF  145 (230)
T ss_dssp             SSSSSSSTTTSCCCCCEESS-SCEESSHHHHHTTSTTTCSS------SSCCCCBCCSCCCCCCCCCSCCCCCCCBCCSCC
T ss_pred             cccccccccccccceEEEeC-CceeCCHHHHHHHHhhCccc------cccccccccccccccccccCcccceeEEEeeee
Confidence                          167775 45799999999999998863      3566666632              348899999


Q ss_pred             CCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE-eCCeeeeeeccchhhhhhh
Q psy3210         205 CPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       205 ~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~-~~g~~G~fP~~yVeE~~~m  255 (272)
                      .+.+.+||+|++||+|.|+.+.+  .|||+|+ .+|+.|+||++||+++...
T Consensus       146 ~~~~~~eLsf~~Gd~i~v~~~~~--~~Ww~g~~~~g~~G~~P~~yv~~~~~~  195 (230)
T 2dvj_A          146 NGNDEEDLPFKKGDILRIRDKPE--EQWWNAEDSEGKRGMIPVPYVEKYRPA  195 (230)
T ss_dssp             CCSSSSSCCCCSSCBCCCCBCSC--SSEEEEECTTSCEEEEEGGGSCCCCSS
T ss_pred             cCCCCCCccCcCCCEEEEEEccC--CCcEEEEeCCCCEEEEehHHeEEcCCC
Confidence            99999999999999999998866  6899999 6799999999999987544

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=100.00  E-value=2.8e-35  Score=245.50  Aligned_cols=154  Identities=22%  Similarity=0.380  Sum_probs=131.4

Q ss_pred             CCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCe---eeEEEEEE---ecCCC-cc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEK---VKHMKVYE---KEMDG-VP  153 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~---v~H~~I~~---~~~g~-~~  153 (272)
                      ..++.++||||.|+|++||++|..  .++|+||||+| +.     ++.|+||++.++.   |+||+|..   .++|. ..
T Consensus         7 ~~l~~~~Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S-~~-----~g~y~LSv~~~~~~~~v~H~~I~~~~~~~~g~~~~   80 (174)
T 3qwx_X            7 DPFEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDS-SR-----PGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAA   80 (174)
T ss_dssp             CGGGGGGGEETTCCHHHHHHHHHSTTCCTTEEEEEEC-SS-----TTCEEEEEECCSSSSCEEEEEEEECCCCTTSSSCC
T ss_pred             CccccCCCccCCCCHHHHHHHHhccCCCCCeEEEEec-CC-----CCCEEEEEEECCCCCceEEEEEEeccCCCCCcccc
Confidence            678899999999999999999976  56899999999 44     5999999999988   99999987   32210 01


Q ss_pred             eEEeecccccchhhhhhhhhhcccccccccccccccccccee---eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcC
Q psy3210         154 QYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ---IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQK  230 (272)
Q Consensus       154 ~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~---~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~  230 (272)
                      .|+++ ...|+||.+||+||+.+++      +.+.|..|+.+   ..++|+|||.+.+.+||+|.+||+|.|+++.+  .
T Consensus        81 ~~~~~-~~~F~sl~eLv~~y~~~~~------~~~~L~~P~~~p~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~--~  151 (174)
T 3qwx_X           81 GVKIA-NQSFPDIPALLNHFKMRVL------TEASLLAAYKKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTN--Q  151 (174)
T ss_dssp             CEEET-TEEESSHHHHHHHTTSSCS------SSCCCCEECCCCCSEEEEESSCBCCSSTTBCCBCTTCEEEEEECCS--S
T ss_pred             eEEEC-CeecCcHHHHhhhhhcCcc------cccccccccccccccEEEEecCcccCCCCccccccCCEEEEEEccC--C
Confidence            68886 6689999999999999884      45667777743   46899999999999999999999999998876  6


Q ss_pred             CeEEEE-eCCeeeeeeccchhh
Q psy3210         231 GWWKGK-IDERVSYFFQLYWGN  251 (272)
Q Consensus       231 gwW~G~-~~g~~G~fP~~yVeE  251 (272)
                      |||+|+ .+|+.|+||+|||+.
T Consensus       152 ~Ww~g~~~~g~~G~~P~nyv~~  173 (174)
T 3qwx_X          152 DWWEARNALGTTGLVPANYVQI  173 (174)
T ss_dssp             SEEEEECTTCCEEEEEGGGEEE
T ss_pred             CeEEEEECCCCEEEEChHHEEe
Confidence            899999 589999999999973

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=100.00  E-value=3.4e-34  Score=259.33  Aligned_cols=166  Identities=21%  Similarity=0.384  Sum_probs=134.8

Q ss_pred             CCCCCcceeecCccCcCCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCe---eeE
Q psy3210          67 QPLGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEK---VKH  141 (272)
Q Consensus        67 ~~~~~~g~~P~~~~~~~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~---v~H  141 (272)
                      +..|+++++|+++   ..++.++||||.|+|++||++|..  ..+|+||||+| +.     ++.|+||++.+++   |+|
T Consensus        23 ~~~g~~~~~~~~~---~~l~~~~Wyhg~i~R~~Ae~lL~~~~~~~G~FLVR~S-~~-----~g~y~LSv~~~~~~~~v~H   93 (308)
T 3qwy_A           23 SMTGGQQMTTNGF---DPFEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDS-SR-----PGEYSLTVREADEGNAVCH   93 (308)
T ss_dssp             -----------CC---CGGGGGGGEETTCCHHHHHHHHHSTTCCTTEEEEEEC-SS-----TTCEEEEEECCSSSSCEEE
T ss_pred             hccCCcccccccc---CcccccccccCCCCHHHHHHHHhccCCCCceEEEEcc-CC-----CCCEEEEEEeCCCCCceEE
Confidence            5567889999988   889999999999999999999976  67899999999 54     5999999999998   999


Q ss_pred             EEEEE-ecCCCc---ceEEeecccccchhhhhhhhhhcccccccccccccccccccee---eeeeeeccCCCCCCCCCcc
Q psy3210         142 MKVYE-KEMDGV---PQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ---IIAVAEFDFCPTEANQLPL  214 (272)
Q Consensus       142 ~~I~~-~~~g~~---~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~---~~~~alydf~~~~~~ELsl  214 (272)
                      |+|.. .++..|   ..|++++ ..|+||.+||+||+.+++      ..+.|..|+.+   ..++|+|||.+.+.+||+|
T Consensus        94 ~~I~~~~~~~~g~~~g~~~~~~-~~F~Sl~eLv~~y~~~~~------~~~~L~~P~~~p~~~~~~al~dy~~~~~~eLsf  166 (308)
T 3qwy_A           94 YLIERGEPKEDGTAAAGVKIAN-QSFPDIPALLNHFKMRVL------TEASLLAAYKKPIIEVVVGTFKFTGERETDLPF  166 (308)
T ss_dssp             EEEEECCCCTTTTCCCCEEETT-EEESSHHHHHHHHHHSCS------SSCCCCEECCCCCCEEEEESSCBCCSSTTBCCB
T ss_pred             EEEeeccCCCcCcccceEEEeC-eeeCCHHHHHHHHhhccc------ccchhccccccccceeEEEeceEcCCCCCcCcC
Confidence            99987 543110   1799986 679999999999999884      35567777754   4689999999999999999


Q ss_pred             CCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchh
Q psy3210         215 KQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWG  250 (272)
Q Consensus       215 ~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVe  250 (272)
                      .+||+|.|+.+.+  .+||+|+. +|+.|+||++||+
T Consensus       167 ~~Gd~i~v~~~~~--~~Ww~g~~~~g~~G~~P~~yv~  201 (308)
T 3qwy_A          167 EQGERLEILSKTN--QDWWEARNALGTTGLVPANYVQ  201 (308)
T ss_dssp             CTTCEEEEEECCS--SSEEEEECTTSCEEEEEGGGEE
T ss_pred             CCCCEEEEEEcCC--CCeEEEEeCCCCeeEecccccc
Confidence            9999999998776  68999996 8999999999999

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=100.00  E-value=1.9e-33  Score=241.73  Aligned_cols=170  Identities=27%  Similarity=0.473  Sum_probs=141.4

Q ss_pred             CCcceeecCccCcCCcccccEeeeeCCHHHHHHhc-ccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEec
Q psy3210          70 GGNEWTAKSWADHENLSEYLWFVGEMGREKATSLL-EREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE  148 (272)
Q Consensus        70 ~~~g~~P~~~~~~~~l~~~~Wf~g~isR~~Ae~lL-~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~  148 (272)
                      +..||+|+|+   ..+...+||||.|+|++||++| ...++|+||||+|++.     ++.|+||++.++.|+||+|....
T Consensus        43 g~~G~~P~~y---v~~~~~~w~~g~isr~~ae~lL~~~~~~G~fLvR~S~~~-----~g~~~LSv~~~~~v~h~~I~~~~  114 (217)
T 1gri_A           43 GKDGFIPKNY---IEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESA-----PGDFSLSVKFGNDVQHFKVLRDG  114 (217)
T ss_dssp             SCEEEEEGGG---EECCCCSSBCTTCCHHHHHHHHHTCSSTTCEEEEECSSS-----TTCEEEEEEETTEEEEEEEEECS
T ss_pred             CccceECCcc---cccccchhhcccCCHHHHHHHHhccCCCceEEEEccCCC-----CCCEEEEEEECCEEEEEEEEEcC
Confidence            4578999999   4466789999999999999999 5578999999999754     59999999999999999999887


Q ss_pred             CCCcceEEeecccccchhhhhhhhhhccccccccccccccc-cccceeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeC
Q psy3210         149 MDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRL-QLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEG  227 (272)
Q Consensus       149 ~g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L-~~P~~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~g  227 (272)
                      +|   .|++.. ..|+|+.+||+||+.+++........... ..|.....++|+|||.+.+.+||+|.+||+|.|+.+.+
T Consensus       115 ~g---~~~~~~-~~f~sl~eLv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~al~~y~~~~~~eL~~~~Gd~i~v~~~~~  190 (217)
T 1gri_A          115 AG---KYFLWV-VKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSD  190 (217)
T ss_dssp             SS---CEESSS-CEESSHHHHHHHHHHSCSSSSTTCCCCBCCCCCCCCCEEEESSCCCCSSTTBCCCCTTCEEEEEECCS
T ss_pred             CC---CEEEee-eEcCCHHHHHHhhhccccccccceeecccccCCCCceEEEecCCccCCCCCcCCCCCCCEEEEEEeCC
Confidence            76   788884 56999999999999988754332111110 11223457899999999999999999999999998876


Q ss_pred             CcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         228 EQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       228 e~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                        .|||.|+.+|+.|+||++||+++.
T Consensus       191 --~~W~~g~~~g~~G~~P~~yv~~~~  214 (217)
T 1gri_A          191 --PNWWKGACHGQTGMFPRNYVTPVN  214 (217)
T ss_dssp             --SSEEEEECSSCEEEEEGGGEEEEC
T ss_pred             --CCeEEEEECCeEEEEeHHHeEECC
Confidence              689999999999999999999753

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=100.00  E-value=7.6e-34  Score=256.60  Aligned_cols=155  Identities=22%  Similarity=0.409  Sum_probs=133.1

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEe---------------
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK---------------  147 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~---------------  147 (272)
                      .+++.++||||.|+|++||++|+..++|+||||+|++.     ++.|+||++.++.|+||+|...               
T Consensus         6 ~~~~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~   80 (304)
T 2eyz_A            6 DSEERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTS-----PGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPP   80 (304)
T ss_dssp             CCSSSSSSCCCCCCSSHHHHTTTTCCSSCEECCSCCSS-----SSCCEEEECSSSSCEEEECCCCSSCCSSCCCCCCCSS
T ss_pred             ccccCCCCccCCCCHHHHHHHhcCCCCCEEEEEeCCCC-----CCCEEEEEEECCEEEEEEEeecccccccccccccccc
Confidence            67889999999999999999999889999999999744     5899999999999999999873               


Q ss_pred             --cCCCcceEEeecccccchhhhhhhhhhccccccccccccccccccce--------------eeeeeeeccCCCCCCCC
Q psy3210         148 --EMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR--------------QIIAVAEFDFCPTEANQ  211 (272)
Q Consensus       148 --~~g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~--------------~~~~~alydf~~~~~~E  211 (272)
                        .++   .|.+. ...|+||.+||+||+.+++.      .+.|..|+.              ...++|+|||.+.+.+|
T Consensus        81 ~~~~~---~~~~~-~~~F~sl~~LV~~y~~~~l~------~~~L~~P~~~~~~~~g~~~~~~~~~~~~alydy~~~~~~e  150 (304)
T 2eyz_A           81 GVSPS---RLRIG-DQEFDSLPALLEFYKIHYLD------TTTLIEPVSRSRQGSGVILRQEEAEYVRALFDFNGNDEED  150 (304)
T ss_dssp             SSSCC---CCCBT-TBCCSCHHHHHTTTTTSCCS------SSSSCCBCCSCSCCSCCCCCCCCCCEEEECSCCCCSCSSS
T ss_pred             ccCCC---eEEeC-CcEECCHHHHHHHhhhCccc------cceeccccccccccccccCCcccceeEEEEeeecCCCCCc
Confidence              233   67775 55799999999999999862      455666653              23588999999999999


Q ss_pred             CccCCCcEEEEeeeeCCcCCeEEEE-eCCeeeeeeccchhhhhh
Q psy3210         212 LPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       212 Lsl~~Gd~i~v~~k~ge~~gwW~G~-~~g~~G~fP~~yVeE~~~  254 (272)
                      |+|++||+|.|+.+.+  .|||.|+ .+|+.|+||++||+++..
T Consensus       151 Lsf~~Gd~i~v~~~~~--~~Ww~g~~~~g~~G~~P~~yv~~~~~  192 (304)
T 2eyz_A          151 LPFKKGDILRIRDKPE--EQWWNAEDSEGKRGMIPVPYVEKYRP  192 (304)
T ss_dssp             CCCCTTCEEEEEECCS--SSEEEEECTTSCEEEEESTTEEECCC
T ss_pred             CcccCCCEEEEEEecC--CCcEEEEeCCCceeccchhccccccC
Confidence            9999999999998866  6899999 679999999999997643

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=99.96  E-value=1e-34  Score=262.11  Aligned_cols=156  Identities=21%  Similarity=0.403  Sum_probs=136.3

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      ..++.++||||.|+|++||++|...++|+||||+|++.     ++.|+||++.++.|+||+|.+.+++   .|.+.+ ..
T Consensus         7 d~~~~~~Wyhg~isR~~Ae~lL~~~~~G~FLvR~S~~~-----~g~~~LSv~~~~~v~H~~I~~~~~g---~~~~~~-~~   77 (303)
T 2lqn_A            7 DSSDRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTC-----PGDYVLSVSENSRVSHYIINSLPNR---RFKIGD-QE   77 (303)
Confidence            67888999999999999999998888999999999744     5899999999999999999986665   688876 57


Q ss_pred             cchhhhhhhhhhcccccccccccccccccccee---------------------eeeeeeccCCCCCCCCCccCCCcEEE
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFRQ---------------------IIAVAEFDFCPTEANQLPLKQGCQVI  221 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~---------------------~~~~alydf~~~~~~ELsl~~Gd~i~  221 (272)
                      |+||.+||+||+++++      +.+.|..|+.+                     ..++|+|||.+.+.+||+|++||+|.
T Consensus        78 F~sl~~Lv~~y~~~~~------~~~~L~~P~~r~~~~~~~~~~~p~~~~~~~~~~~~~alydy~~~~~~eLsf~~Gd~i~  151 (303)
T 2lqn_A           78 FDHLPALLEFYKIHYL------DTTTLIEPAPRYPSPPMGSVSAPNLPTAEDNLEYVRTLYDFPGNDAEDLPFKKGEILV  151 (303)
Confidence            9999999999999986      35666666643                     34889999999999999999999999


Q ss_pred             EeeeeCCcCCeEEEEe-CCeeeeeeccchhhhhhh
Q psy3210         222 VLSKEGEQKGWWKGKI-DERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       222 v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE~~~m  255 (272)
                      |+.+.+  .|||.|+. +|+.||||++||+++..-
T Consensus       152 v~~~~~--~~Ww~~~~~~g~~G~~P~~yv~~~~~~  184 (303)
T 2lqn_A          152 IIEKPE--EQWWSARNKDGRVGMIPVPYVEKLVRS  184 (303)
Confidence            998876  68999995 799999999999987654

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.94  E-value=8.3e-27  Score=180.50  Aligned_cols=108  Identities=19%  Similarity=0.359  Sum_probs=96.1

Q ss_pred             CCCcceeecCccCcCCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEec
Q psy3210          69 LGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE  148 (272)
Q Consensus        69 ~~~~g~~P~~~~~~~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~  148 (272)
                      +|.+|++|+|+   ..++.++||||.|+|++||++|...++|+||||+|++.     ++.|+||++.++.|+||+|....
T Consensus         3 ~g~~G~ip~n~---v~~~~~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~   74 (111)
T 2eo3_A            3 SGSSGMSSARF---DSSDRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTC-----PGDYVLSVSENSRVSHYIINSLP   74 (111)
T ss_dssp             CCCCCSCSCCC---CTTCHHHHEEESCCHHHHHHHHSSCCTTCEEEEECSSS-----SSCEEEEEEETTEEEEEEEEEET
T ss_pred             CCccccccccc---cccCCCCcccCCCCHHHHHHHhcCCCCceEEEEeecCC-----CCCEEEEEEeCCeEEEEEEEEcC
Confidence            47789999999   77889999999999999999999889999999999744     58999999999999999999866


Q ss_pred             CCCcceEEeecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         149 MDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       149 ~g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      +|   .|++.+ ..|+||.|||+||+.+++.      .+.|..|++
T Consensus        75 ~g---~~~l~~-~~F~sl~~LV~~y~~~~l~------~~~L~~Pv~  110 (111)
T 2eo3_A           75 NR---RFKIGD-QEFDHLPALLEFYKIHYLD------TTTLIEPAP  110 (111)
T ss_dssp             TT---EEEETT-CCBSSHHHHHHHHTTSCSS------SSCCCCBCC
T ss_pred             CC---CEEECC-cccCCHHHHHHHHhhCCCC------CccCCCcCc
Confidence            66   799865 5799999999999999863      578888875

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A

Probab=99.93  E-value=8e-26  Score=175.13  Aligned_cols=109  Identities=20%  Similarity=0.362  Sum_probs=90.8

Q ss_pred             CcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeeccccc
Q psy3210          84 NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYF  163 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F  163 (272)
                      +|+.++||||.|+|++||++|+..++|+||||+|++.     ++.|+||++.++.|+||+|...++|   .|++.+...|
T Consensus         1 sL~~~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~g---~~~~~~~~~F   72 (112)
T 3k2m_A            1 SLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESS-----PGQRSISLRYEGRVYHYRINTASDG---KLYVSSESRF   72 (112)
T ss_dssp             CGGGSTTEEESCCHHHHHHHTTTCCTTEEEEEECSSS-----TTCEEEEEEETTEEEEEEEEECTTS---CEESSTTCCB
T ss_pred             CCccCcceeeCCCHHHHHHHhccCCCceEEEEeCCCC-----CCCEEEEEEeCCcEEEEEEEECCCC---cEEECCCCeE
Confidence            4678999999999999999999888999999999744     5999999999999999999987666   7888877899


Q ss_pred             chhhhhhhhhhccccccccccccccccccceeeeeeeeccCC
Q psy3210         164 RSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFC  205 (272)
Q Consensus       164 ~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~~~~~alydf~  205 (272)
                      +||.|||+||+.++     +++.+.|..|+.+......+++.
T Consensus        73 ~sl~~LV~~y~~~~-----~~l~~~L~~P~~~~~~p~~~~ls  109 (112)
T 3k2m_A           73 NTLAELVHHHSTVA-----DGLITTLHYPAPKRNKPTVYGVS  109 (112)
T ss_dssp             SSHHHHHHHHHHCC-----TTSSSCCCEECCCC---------
T ss_pred             CCHHHHHHHHhhCC-----CCCccCCCCCCCCCCCCCCCCcC
Confidence            99999999999987     78999999999765555555543

>2lnw_A VAV-2, guanine nucleotide exchange factor VAV2; signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2lnx_A

Probab=99.93  E-value=9.5e-26  Score=177.39  Aligned_cols=107  Identities=36%  Similarity=0.684  Sum_probs=96.2

Q ss_pred             cCcCCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec
Q psy3210          80 ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ  159 (272)
Q Consensus        80 ~~~~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~  159 (272)
                      +...+++.++||||.|+|++||++|...++|+||||+|++.     ++.|+||++.++.|+||+|...++    .|++.+
T Consensus        14 ~~~~~l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~----~~~l~~   84 (122)
T 2lnw_A           14 SREIDYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAE-----AERFAISIKFNDEVKHIKVVEKDN----WIHITE   84 (122)
T ss_dssp             CSCCCSTTSTTBCCSCCHHHHHHHHHHSCTTBEEEEECCCS-----SEEEEEEEECSSCEEEEEEEEETT----EEESSS
T ss_pred             CccCCcccCcCCCcCCCHHHHHHHhcCCCCCeEEEEeCCCC-----CCcEEEEEEeCCcEEEEEEEEcCC----EEEECC
Confidence            33478899999999999999999998888999999999743     599999999999999999997654    788888


Q ss_pred             ccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         160 SRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       160 ~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      ...|+||.+||+||+.++|.+..+++.+.|..|+++
T Consensus        85 ~~~F~sl~eLV~~y~~~~l~~~~~~l~~~L~~P~~~  120 (122)
T 2lnw_A           85 AKKFDSLLELVEYYQCHSLKESFKQLDTTLKYPYKS  120 (122)
T ss_dssp             SCCBSSHHHHHHHHHHSCGGGTCTTCCCCCCBCSSS
T ss_pred             CCeECCHHHHHHHHhhCcCcccCCCcCeeeCCcCCC
Confidence            889999999999999999998889999999999854

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jwo_A

Probab=99.92  E-value=2.2e-25  Score=168.57  Aligned_cols=97  Identities=22%  Similarity=0.456  Sum_probs=87.5

Q ss_pred             CcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeeccccc
Q psy3210          84 NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYF  163 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F  163 (272)
                      +|+.++||||.|+|++||++|...++|+||||+|++.     ++.|+||++.++.|+||+|...+ +   .|++.+...|
T Consensus         1 ~L~~~~Wyhg~isr~~Ae~lL~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~-~---~~~~~~~~~F   71 (98)
T 3us4_A            1 GLSLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARH-----PGDYVLCVSFGRDVIHYRVLHRD-G---HLTIDEAVFF   71 (98)
T ss_dssp             -CTTCTTBCCSCCHHHHHHHTCSCCTTCEEEEECSSS-----TTCEEEEEEETTEEEEEEEEEET-T---EEESSSSSEE
T ss_pred             CCccCcccCCCCCHHHHHHHccCCCCcEEEEEeCCCC-----CCcEEEEEEECCceEEEEEEEeC-C---EEEECCCCcc
Confidence            3678899999999999999999888999999999744     58999999999999999999864 4   7999887889


Q ss_pred             chhhhhhhhhhccccccccccccccccccce
Q psy3210         164 RSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       164 ~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      +||.+||+||+.++     +++.++|..|+.
T Consensus        72 ~sl~~Lv~~y~~~~-----~~l~~~L~~P~p   97 (98)
T 3us4_A           72 CNLMDMVEHYSKDK-----GAICTKLVRPKR   97 (98)
T ss_dssp             SSHHHHHHHHHHCC-----TTSSSCCCSBCC
T ss_pred             CCHHHHHHHhhhCC-----CCCeEcCCccCC
Confidence            99999999999998     789999999985

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.92  E-value=1.9e-25  Score=175.47  Aligned_cols=108  Identities=25%  Similarity=0.462  Sum_probs=94.1

Q ss_pred             eecCcc-CcCCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCC
Q psy3210          75 TAKSWA-DHENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDG  151 (272)
Q Consensus        75 ~P~~~~-~~~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~  151 (272)
                      +|+|+. +..+++.++||||.|+|++||++|..  .++|+||||+|++.     ++.|+||++.++.|+||+|...++| 
T Consensus         2 ~psnyv~~~~~l~~~~WyhG~isR~eAe~lL~~~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~g-   75 (121)
T 2dly_A            2 SSGSSGAEDRSLQAEPWFFGAIKRADAEKQLLYSENQTGAFLIRESESQ-----KGDFSLSVLDEGVVKHYRIRRLDEG-   75 (121)
T ss_dssp             CSCCCCCSSGGGGGCSSBCSSCCHHHHHHHHTSSSCCTTCEEEEECSSS-----SSCEEEEEESSSCEEEEEEEECSSS-
T ss_pred             CCccccccccccCcCCccccCCCHHHHHHHHhcCCCCCCEEEEEcCCCC-----CCceEEEEEECCeEEEEEEEEcCCC-
Confidence            477773 34678899999999999999999975  47899999999744     5899999999999999999986665 


Q ss_pred             cceEEeecccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         152 VPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       152 ~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                        .|++.+...|+||.|||+||+.++     .++.+.|..|+.+
T Consensus        76 --~~~l~~~~~F~sl~eLV~~y~~~~-----~~l~~~L~~P~~~  112 (121)
T 2dly_A           76 --GFFLTRRKVFSTLNEFVNYYTTTS-----DGLCVKLEKPCLK  112 (121)
T ss_dssp             --CEEEETTEEESSHHHHHHHHTTCC-----SSSSSCCCSBCCC
T ss_pred             --CEEECCCCccCCHHHHHHHHhhCC-----CCCceeCCeecCC
Confidence              799988889999999999999998     5788999999864

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.92  E-value=3.3e-25  Score=173.32  Aligned_cols=106  Identities=36%  Similarity=0.688  Sum_probs=95.2

Q ss_pred             CcCCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc
Q psy3210          81 DHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS  160 (272)
Q Consensus        81 ~~~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~  160 (272)
                      ...+++.++||||.|+|++||++|.+.++|+||||+|++.     ++.|+||++.++.|+||+|...+ +   .|++.+.
T Consensus         9 ~~~~l~~~~WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~-g---~~~l~~~   79 (118)
T 2dlz_A            9 REIDYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAE-----AERFAISIKFNDEVKHIKVVEKD-N---WIHITEA   79 (118)
T ss_dssp             CCCCGGGSTTEEESCCHHHHHHHHHHSCTTBEEEECCSCS-----SCCEEEEEECSSSEEEEEEEEET-T---EEESTTS
T ss_pred             CccccccCCceecCCCHHHHHHHhcCCCCCEEEEEeCCCC-----CCCEEEEEEECCcEEEEEEEEcC-C---EEEEeCC
Confidence            3478899999999999999999998889999999999743     58999999999999999999864 4   7999877


Q ss_pred             cccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         161 RYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      ..|+||.+||+||+.+++.+.+.++++.|..|+.+
T Consensus        80 ~~F~sl~~LV~~y~~~~l~~~~~gl~~~L~~Pv~~  114 (118)
T 2dlz_A           80 KKFDSLLELVEYYQCHSLKESFKQLDTTLKYPYSG  114 (118)
T ss_dssp             CCBSSHHHHHHHHTTSCTTTTCTTCCCCCCBCCSC
T ss_pred             cccCCHHHHHHHHhhCcccccCCCcccEeCCcCCC
Confidence            88999999999999999887777888999999864

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A

Probab=99.92  E-value=3.2e-25  Score=170.08  Aligned_cols=100  Identities=28%  Similarity=0.463  Sum_probs=90.4

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      .+++.++||||.|+|++||++|...++|+||||+|++.     ++.|+||++.++.|+||+|...+ |   .|++.+...
T Consensus         3 ~~L~~~~Wyhg~isr~~Ae~lL~~~~~G~FLVR~S~~~-----~g~~~LSv~~~~~v~H~~I~~~~-g---~~~l~~~~~   73 (106)
T 3eaz_A            3 TKLSLMPWFHGKITREQAERLLYPPETGLFLVRESTNY-----PGDYTLCVSSDGKVEHYRIMYHA-S---KLSIDEEVY   73 (106)
T ss_dssp             CTGGGCTTBCCSCCHHHHHHHTCSCCTTEEEEEECTTS-----TTCEEEEEEETTEEEEEECEEET-T---EEESSSSSC
T ss_pred             cccccCCCcCCCCCHHHHHHHhCCCCCCEEEEEECCCC-----CCcEEEEEEeCCceEEEEEEecC-C---EEEECCCCc
Confidence            57889999999999999999999888999999999744     58999999999999999999764 4   799988778


Q ss_pred             cchhhhhhhhhhccccccccccccccccccceee
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFRQI  196 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~~  196 (272)
                      |+||.+||+||+.++     +++.+.|..|+.+.
T Consensus        74 F~sl~~Lv~~y~~~~-----~gl~~~L~~P~~~~  102 (106)
T 3eaz_A           74 FENLMQLVEHYTSDA-----DGLCTRLIKPKVME  102 (106)
T ss_dssp             BSSHHHHHHHHHHCC-----TTSSSCCCEECCCC
T ss_pred             cCCHHHHHHHHhhCC-----CCCCeecCCcCCCC
Confidence            999999999999998     78999999999654

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A

Probab=99.92  E-value=5e-25  Score=171.12  Aligned_cols=103  Identities=28%  Similarity=0.468  Sum_probs=91.3

Q ss_pred             cCcCCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEee----CCeeeEEEEEEecCCCcc
Q psy3210          80 ADHENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKT----DEKVKHMKVYEKEMDGVP  153 (272)
Q Consensus        80 ~~~~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~----~~~v~H~~I~~~~~g~~~  153 (272)
                      |+...++.++||||.|+|++||++|..  .++|+||||+|++.     ++.|+||++.    ++.|+||+|...++|   
T Consensus         4 a~~~~l~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~-----~g~y~LSv~~~~~~~~~v~H~~I~~~~~g---   75 (114)
T 1blj_A            4 APVETLEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESESN-----KGAFSLSVKDITTQGEVVKHYKIRSLDNG---   75 (114)
T ss_dssp             CSSCCSCCSSSBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTC-----SSCEEEEECBCCTTTCBCCCEEEEEETTT---
T ss_pred             CccCccccCCccCCCCCHHHHHHHHhhCCCCCceEEEEeCCCC-----CCCEEEEEEEecCCCCcEEEEEEEEcCCC---
Confidence            445788999999999999999999975  58999999999744     5899999998    689999999987666   


Q ss_pred             eEEeecccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         154 QYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       154 ~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      .|++.+...|+||.|||+||+.++     +++.+.|..|+.+
T Consensus        76 ~~~l~~~~~F~sl~~LV~~y~~~~-----~~l~~~L~~p~~~  112 (114)
T 1blj_A           76 GYYISPRITFPTLQALVQHYSKKG-----DGLCQKLTLPCVN  112 (114)
T ss_dssp             EEEEETTEEESSHHHHHHHHHHCC-----SSSSSCCCCCSCC
T ss_pred             CEEECCCcccCCHHHHHHHhhhCC-----CCCceecCccCCC
Confidence            799988889999999999999998     6899999999864

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.91  E-value=3e-24  Score=205.21  Aligned_cols=183  Identities=16%  Similarity=0.286  Sum_probs=135.9

Q ss_pred             CCcceeecCccC-cCCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEec
Q psy3210          70 GGNEWTAKSWAD-HENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE  148 (272)
Q Consensus        70 ~~~g~~P~~~~~-~~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~  148 (272)
                      ++.||+|+||.. ..+++.++||||.|+|++||.+|....+|+||||+|+..     ++.|+||++.++.|+||+|...+
T Consensus        86 ~~~G~~P~~yv~~~~~le~~~wyhg~i~r~~ae~ll~~~~~G~fLvR~s~~~-----~~~~~lsv~~~~~v~h~~I~~~~  160 (495)
T 1opk_A           86 NGQGWVPSNYITPVNSLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESS-----PGQRSISLRYEGRVYHYRINTAS  160 (495)
T ss_dssp             SCEEEEEGGGEEESSSGGGSTTEEEECCHHHHHHHGGGCCTTEEEEEECSSS-----TTCEEEEEEETTEEEEEECEECT
T ss_pred             CCcceeccccccccccccchhhhccCCCHHHHHHHhhCCCCceEEEEeCCCC-----CCceEEEEeeCCeEEEEEEEecC
Confidence            457899999954 567889999999999999999998888999999999754     58999999999999999999877


Q ss_pred             CCCcceEEeecccccchhhhhhhhhhccccccccccccccccccceeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCC
Q psy3210         149 MDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGE  228 (272)
Q Consensus       149 ~g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge  228 (272)
                      +|   .|++.....|.++.+||+||...+     +++.+.|..|........++.... ..+++.+...++ .+..+.|.
T Consensus       161 ~g---~~~~~~~~~F~sl~eLv~~~~~~~-----~g~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~lG~  230 (495)
T 1opk_A          161 DG---KLYVSSESRFNTLAELVHHHSTVA-----DGLITTLHYPAPKRNKPTIYGVSP-NYDKWEMERTDI-TMKHKLGG  230 (495)
T ss_dssp             TS---CEESSTTSCBSSHHHHHHHHTTCC-----TTSSSCCCEECCCCSCCCCSSSCS-SSSCCBCCGGGE-EEEEESGG
T ss_pred             CC---ceEeccCccchhHHHHhhhhcccc-----cccchhccccccccccccccccCc-cccccccCHHHc-eeeeEecC
Confidence            66   788888888999999999998877     778888877774332222222211 122233333332 34444444


Q ss_pred             c--CCeEEEEeCC--e---------eeeeeccchhhhhhhccCCCCCcccce
Q psy3210         229 Q--KGWWKGKIDE--R---------VSYFFQLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       229 ~--~gwW~G~~~g--~---------~G~fP~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      +  ...|++...+  .         .......|++|+++|+++.|+|||++.
T Consensus       231 G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~  282 (495)
T 1opk_A          231 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL  282 (495)
T ss_dssp             GTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEE
Confidence            3  3467776542  1         111235688999999999999999985

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.91  E-value=6.1e-25  Score=172.03  Aligned_cols=103  Identities=20%  Similarity=0.381  Sum_probs=91.8

Q ss_pred             cCcCCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec
Q psy3210          80 ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ  159 (272)
Q Consensus        80 ~~~~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~  159 (272)
                      ++...++.++||||.|+|++||++|...++|+||||+|++.     ++.|+||++.++.|+||+|...++|   .|++.+
T Consensus         8 ap~~~l~~~~WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~g---~~~l~~   79 (119)
T 2ecd_A            8 TPVNSLEKHSWYHGPVSRSAAEYLLSSLINGSFLVRESESS-----PGQLSISLRYEGRVYHYRINTTADG---KVYVTA   79 (119)
T ss_dssp             CSSCCCCCSSSEEEECCHHHHHHHHHTSCTTBEEEEEESSS-----TTEEEEEEECSSCEEEECCCCCSSS---CCCCCS
T ss_pred             ccccccccCccccCCCCHHHHHHHhcCCCCCeEEEEeCCCC-----CCCEEEEEEECCeEEEEEEEEcCCC---CEEEcC
Confidence            44578889999999999999999998888999999999744     5899999999999999999986665   788877


Q ss_pred             ccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         160 SRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       160 ~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      ...|+||.|||+||+.++     +++.+.|..|+.+
T Consensus        80 ~~~F~sl~~LV~~y~~~~-----~gl~~~L~~P~~~  110 (119)
T 2ecd_A           80 ESRFSTLAELVHHHSTVA-----DGLVTTLHYPAPK  110 (119)
T ss_dssp             SCCCSSHHHHHHHHHHCC-----TTSSSCCCBCCSS
T ss_pred             CCcCCCHHHHHHHHhhCC-----CCCceECCCccCC
Confidence            778999999999999987     7899999999965

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*

Probab=99.91  E-value=1.2e-24  Score=166.25  Aligned_cols=97  Identities=27%  Similarity=0.469  Sum_probs=85.4

Q ss_pred             cccccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec----
Q psy3210          85 LSEYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ----  159 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~----  159 (272)
                      ++.++||||.|+|++||++|.. .++|+||||+|++.     ++.|+||++.++.|+||+|...++|   .|++.+    
T Consensus         1 l~~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~-----~g~~~LSv~~~~~v~H~~I~~~~~g---~~~l~~~~g~   72 (104)
T 1d4t_A            1 MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESV-----PGVYCLCVLYHGYIYTYRVSQTETG---SWSAETAPGV   72 (104)
T ss_dssp             CTTCTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSS-----TTCEEEEEEETTEEEEEEEEECTTS---CEEECBCTTS
T ss_pred             CCCCceEccCCCHHHHHHHHHhcCCCCEEEEeeCCCC-----CCCEEEEEEECCeEEEEEEEECCCC---eEEEeccCCC
Confidence            4678999999999999999974 48899999999744     5899999999999999999986666   799984    


Q ss_pred             -ccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         160 -SRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       160 -~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                       ...|+||.|||+||+.++     +++.+.|..|+.
T Consensus        73 ~~~~F~sl~~LV~~y~~~~-----~~l~~~L~~P~~  103 (104)
T 1d4t_A           73 HKRYFRKIKNLISAFQKPD-----QGIVIPLQYPVE  103 (104)
T ss_dssp             CCCCBSSHHHHHHHHTSSS-----SSSSSCCCEECC
T ss_pred             CCcccCCHHHHHHHHhhCC-----CCCeEECCCcCC
Confidence             568999999999999998     688899999885

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A

Probab=99.91  E-value=1.3e-24  Score=168.46  Aligned_cols=104  Identities=32%  Similarity=0.465  Sum_probs=90.7

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      ..++.++||||.|+|++||++|...++|+||||+| +.     ++.|+|||+.++.|+||+|...+++   .|++.....
T Consensus         5 ~~~~~~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S-~~-----~g~y~LSv~~~~~v~H~~I~~~~~g---~~~~~~~~~   75 (112)
T 1h9o_A            5 PHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRES-SK-----QGCYACSVVVDGEVKHCVINKTATG---YGFAEPYNL   75 (112)
T ss_dssp             GGGSGGGTBCCSCCHHHHHHHHTTCCTTEEEEEEC-SS-----TTCEEEEEEETTEEEEEEEEEETTE---EESSTTCCC
T ss_pred             ccccCCCcccCCCCHHHHHHHhcCCCCceEEEeec-CC-----CCCEEEEEEECCEEEEEEEEEcCCc---eEEeCCCCC
Confidence            45678899999999999999998889999999999 44     4899999999999999999988764   444444568


Q ss_pred             cchhhhhhhhhhcccccccccccccccccccee
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      |+||.+||+||+.++|....+++.+.|..|+.+
T Consensus        76 F~sl~~LV~~y~~~~l~~~~~gl~~~L~~P~~~  108 (112)
T 1h9o_A           76 YSSLKELVLHYQHTSLVQHNDSLNVTLAYPVYA  108 (112)
T ss_dssp             BSSHHHHHHHHHHSCGGGTCTTCCCCCCEETTC
T ss_pred             cCCHHHHHHHHhhCcccccCCCcCeeCCCCcCC
Confidence            999999999999999988778899999999864

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.91  E-value=1.4e-24  Score=164.79  Aligned_cols=95  Identities=27%  Similarity=0.521  Sum_probs=85.7

Q ss_pred             ccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccch
Q psy3210          88 YLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRS  165 (272)
Q Consensus        88 ~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~s  165 (272)
                      ++||||.|+|++||++|..  .++|+||||+|++.     ++.|+||++.++.|+||+|...++|   .|++.+...|+|
T Consensus         2 ~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~-----~g~~~LSv~~~~~v~H~~I~~~~~g---~~~l~~~~~F~s   73 (100)
T 1rja_A            2 EPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKP-----SADYVLSVRDTQAVRHYKIWRRAGG---RLHLNEAVSFLS   73 (100)
T ss_dssp             CCCBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSS-----SSCEEEEECTTSSCEEEEEEECSSS---CEEEETTEEESS
T ss_pred             CCcccCCCCHHHHHHHHhccCCCCCEEEEEeCCCC-----CCCEEEEEEECCEEEEEEEEEcCCC---cEEECCCCccCC
Confidence            6899999999999999987  67999999999744     5899999999999999999986666   799988889999


Q ss_pred             hhhhhhhhhcccccccccccccccccccee
Q psy3210         166 IVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       166 L~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      |.|||+||+.++     .++.+.|..|+.+
T Consensus        74 l~~LV~~y~~~~-----~~l~~~L~~p~~~   98 (100)
T 1rja_A           74 LPELVNYHRAQS-----LSHGLRLAAPCRK   98 (100)
T ss_dssp             HHHHHHHHHHCC-----TTSSSCCCSBCCC
T ss_pred             HHHHHHHHhhCC-----CCCCCCCCccCCC
Confidence            999999999999     4788999999864

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A*

Probab=99.91  E-value=1.6e-24  Score=165.83  Aligned_cols=97  Identities=28%  Similarity=0.479  Sum_probs=85.9

Q ss_pred             cccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEee-----CCeeeEEEEEEecCCCcceEEe
Q psy3210          85 LSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKT-----DEKVKHMKVYEKEMDGVPQYFL  157 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~-----~~~v~H~~I~~~~~g~~~~~~i  157 (272)
                      ++.++||||.|+|++||++|..  .++|+||||+|++.     ++.|+||++.     ++.|+||+|...++|   .|++
T Consensus         1 l~~~~Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~-----~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g---~~~l   72 (105)
T 1lkk_A            1 LEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESEST-----AGSFSLSVRDFDQNQGEVVKHYKIRNLDNG---GFYI   72 (105)
T ss_dssp             CCCCTTBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSS-----TTCEEEEEEEEETTTEEEEEEEEEEECTTS---CEES
T ss_pred             CCcCceecCCCCHHHHHHHHHhcCCCCceEEEEECCCC-----CCcEEEEEEEcccCCCCcEEEEEEEECCCC---CEEE
Confidence            4678999999999999999974  58999999999744     5899999998     689999999987665   7999


Q ss_pred             ecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         158 SQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       158 ~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      .+...|+||.+||+||+.++     +++.+.|..|+.
T Consensus        73 ~~~~~F~sl~~LI~~y~~~~-----~~l~~~L~~P~~  104 (105)
T 1lkk_A           73 SPRITFPGLHELVRHYTNAS-----DGLCTRLSRPCQ  104 (105)
T ss_dssp             STTSCBSSHHHHHHHHHHCC-----TTSSSCCCSBCC
T ss_pred             CCCceeCCHHHHHHHHhhCC-----CCCccCCcCcCC
Confidence            87788999999999999998     789999999985

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*

Probab=99.91  E-value=2.3e-24  Score=173.02  Aligned_cols=105  Identities=36%  Similarity=0.674  Sum_probs=94.2

Q ss_pred             cCCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeeccc
Q psy3210          82 HENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSR  161 (272)
Q Consensus        82 ~~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~  161 (272)
                      +..++.++||||.|+|++||++|...++|+||||+|++.     ++.|+|||+.++.|+||+|. ..+|   .|+|.+..
T Consensus        20 p~~~~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~-~~~g---~~~l~~~~   90 (138)
T 2crh_A           20 PQDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKD-----AAEFAISIKYNVEVKHIKIM-TAEG---LYRITEKK   90 (138)
T ss_dssp             SSCGGGSSSBCCSCCHHHHHHHTTTSCTTEEEEECCSST-----TCCCEEEEEETTEEEEEECE-EETT---EEESSTTC
T ss_pred             CCCCCcCCcccCCCCHHHHHHHhcCCCCCEEEEEECCCC-----CCCEEEEEEECCeEEEEEEE-eCCC---EEEECCCC
Confidence            467789999999999999999999888999999999744     58999999999999999996 4455   89998878


Q ss_pred             ccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         162 YFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       162 ~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      .|+||.+||+||+.+++.+.++++++.|..|+.+
T Consensus        91 ~F~sl~eLV~~y~~~~l~~~~~~l~~~L~~Pv~~  124 (138)
T 2crh_A           91 AFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKE  124 (138)
T ss_dssp             CBSSHHHHHHHHTTSCGGGTCTTCCCCCCEESSC
T ss_pred             ccCCHHHHHHHHHhCccccccCCcCcccCCccCC
Confidence            8999999999999999988778899999999964

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.91  E-value=2.1e-24  Score=179.70  Aligned_cols=113  Identities=25%  Similarity=0.440  Sum_probs=99.4

Q ss_pred             CCCcceeecCccC-cCCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEee-----CCeee
Q psy3210          69 LGGNEWTAKSWAD-HENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKT-----DEKVK  140 (272)
Q Consensus        69 ~~~~g~~P~~~~~-~~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~-----~~~v~  140 (272)
                      .+..||+|+|+.. ...++.++||||.|+|++||++|..  .++|+||||+|++.     ++.|+||++.     ++.|+
T Consensus        54 ~g~~G~vP~~yv~~~~~l~~~~w~~g~isr~~ae~lL~~~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~~~~~~v~  128 (175)
T 4d8k_A           54 TGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESEST-----AGSFSLSVRDFDQNQGEVVK  128 (175)
T ss_dssp             TCCEEEEEGGGEEETTCSTTCTTBCSSCCHHHHHHHHHSTTCCTTCEEEEECSSS-----TTCEEEEEEEECTTSCEEEE
T ss_pred             CCceeeeccccccccccccccceecCcccHHHHHHHHhcCCCCCCEEEEEECCCC-----CCeEEEEEEeCcccCCCceE
Confidence            3568999999954 4568889999999999999999965  57999999999744     5999999998     77999


Q ss_pred             EEEEEEecCCCcceEEeecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         141 HMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       141 H~~I~~~~~g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      ||+|...++|   .|++.+...|+||.+||+||+.++     +++.++|..||.
T Consensus       129 H~~I~~~~~g---~~~~~~~~~F~sl~~LV~~y~~~~-----~gl~~~L~~Pc~  174 (175)
T 4d8k_A          129 HYKIRNLDNG---GFYISPRITFPGLHELVRHYTNAS-----DGLCTRLSRPCQ  174 (175)
T ss_dssp             EEEEEECSSS---CEESSTTSEESSHHHHHHHHHHCC-----TTSSSCCCSBCC
T ss_pred             EEEEEECCCC---CEEECCCCccCCHHHHHHHHhhCC-----CCCcccCCCcCC
Confidence            9999987666   799988789999999999999998     789999999985

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A

Probab=99.91  E-value=1.5e-24  Score=170.01  Aligned_cols=105  Identities=30%  Similarity=0.495  Sum_probs=92.7

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      .+++.++||||.|+|++||++|.+.++|+||||+|++.    .++.|+||++.++.|+||+|... +|   .|++.+...
T Consensus         6 ~~l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~----~~g~y~LSv~~~~~v~H~~I~~~-~g---~~~l~~~~~   77 (120)
T 2iug_A            6 MSLQNAEWYWGDISREEVNEKLRDTADGTFLVRDASTK----MHGDYTLTLRKGGNNKLIKIFHR-DG---KYGFSDPLT   77 (120)
T ss_dssp             HHHHTCTTBCCSCCHHHHHHHHTTCCTTEEEEEECSSG----GGCSEEEEEEETTEEEEEEEEEE-TT---EEESSSSCC
T ss_pred             cccccCCccccCCCHHHHHHHhcCCCCcEEEEECCCCC----CCCcEEEEEEECCEEEEEEEEEc-CC---EEEECCCCc
Confidence            56788999999999999999999888999999999642    15899999999999999999987 44   799987788


Q ss_pred             cchhhhhhhhhhcccccccccccccccccccee
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      |+||.+||+||+.+++....+++.+.|..|+.+
T Consensus        78 F~sl~~LI~~y~~~~~~~~~~~l~~~L~~Pv~r  110 (120)
T 2iug_A           78 FSSVVELINHYRNESLAQYNPKLDVKLLYPVSK  110 (120)
T ss_dssp             BSSHHHHHHHHHHSCGGGTCGGGCCCCCEECCT
T ss_pred             cCCHHHHHHHHHhCccccccCCcceeeCCcCCc
Confidence            999999999999999876666788999999864

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*

Probab=99.90  E-value=1.4e-24  Score=166.46  Aligned_cols=98  Identities=27%  Similarity=0.571  Sum_probs=87.2

Q ss_pred             CcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEee-----CCeeeEEEEEEecCCCcceEE
Q psy3210          84 NLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKT-----DEKVKHMKVYEKEMDGVPQYF  156 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~-----~~~v~H~~I~~~~~g~~~~~~  156 (272)
                      +++.++||||.|+|++||++|..  .++|+||||+|++.     ++.|+||++.     ++.|+||+|...++|   .|+
T Consensus         1 sl~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~-----~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g---~~~   72 (106)
T 1aot_F            1 SIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETT-----KGAYSLSIRDWDDMKGDHVKHYKIRKLDNG---GYY   72 (106)
T ss_dssp             CCCSSSSCCBSCCHHHHHHHHHTTTCCTTEECCBCBSSS-----SSBBCCEEECCBTTTBCCEEECCBEEETTT---EEE
T ss_pred             CCccCccCCCCCCHHHHHHHHhhCCCCCcEEEEEeCCCC-----CCCEEEEEEecccCCCCcEEEEEEEEeCCC---CEE
Confidence            46788999999999999999975  47999999999743     5899999996     789999999987666   799


Q ss_pred             eecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         157 LSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       157 i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      +.+...|+||.+||+||+.++     +++++.|..|+.
T Consensus        73 l~~~~~F~sl~~LV~~y~~~~-----~~l~~~L~~p~~  105 (106)
T 1aot_F           73 ITTRAQFETLQQLVQHYSERA-----AGLSSRLVVPSH  105 (106)
T ss_dssp             EETTEEESSHHHHHHHHTTCC-----TTSSSCSCSSCC
T ss_pred             ECCCCccCCHHHHHHHhccCC-----CCCcEeecccCC
Confidence            988889999999999999998     789999999985

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1

Probab=99.90  E-value=5.3e-24  Score=162.40  Aligned_cols=95  Identities=20%  Similarity=0.389  Sum_probs=84.0

Q ss_pred             cccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec-----c
Q psy3210          87 EYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ-----S  160 (272)
Q Consensus        87 ~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~-----~  160 (272)
                      +++||||.|+|++||++|.+ .++|+||||+|++.     ++.|+||++.++.|+||+|...++|   .|++..     .
T Consensus         2 ~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~-----~g~~~LSv~~~~~v~H~~I~~~~~g---~~~l~~~~g~~~   73 (103)
T 1i3z_A            2 DLPYYHGCLTKRECEALLLKGGVDGNFLIRDSESV-----PGALCLCVSFKKLVYSYRIFREKHG---YYRIETDAHTPR   73 (103)
T ss_dssp             CCTTEESSCCHHHHHHHHHTTCSTTEEEEEECSSS-----TTCEEEEEECSSSEEEEEEEECTTS---CEEECBCTTSCC
T ss_pred             CCccccCCCCHHHHHHHHhhcCCCceEEEEeCCCC-----CCCEEEEEEECCEEEEEEEEECCCC---eEEEeccCCCCC
Confidence            47899999999999999975 57899999999744     5899999999999999999986666   799873     5


Q ss_pred             cccchhhhhhhhhhccccccccccccccccccce
Q psy3210         161 RYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      ..|+||.+||+||+.++     +++.+.|..|+.
T Consensus        74 ~~F~sl~~LV~~y~~~~-----~~l~~~L~~P~~  102 (103)
T 1i3z_A           74 TIFPNLQELVSKYGKPG-----QGLVVHLSNPIM  102 (103)
T ss_dssp             CEESSSHHHHHHTTSSS-----SSSSSCCCEECC
T ss_pred             cccCCHHHHHHHHhhCC-----CCCeEEcCCccC
Confidence            68999999999999987     788899999885

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.90  E-value=7.4e-24  Score=165.83  Aligned_cols=100  Identities=28%  Similarity=0.458  Sum_probs=88.7

Q ss_pred             CCcccccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec--
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ--  159 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~--  159 (272)
                      .+++.++||||.|+|++||++|.. .++|+||||+|++.     ++.|+|||+.++.|+||+|....+|   .|+|..  
T Consensus         5 ~~~~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~g---~~~l~~~~   76 (119)
T 2ysx_A            5 SSGMVPCWNHGNITRSKAEELLSRTGKDGSFLVRASESI-----SRAYALCVLYRNCVYTYRILPNEDD---KFTVQASE   76 (119)
T ss_dssp             CSSCCCSSEEESCCHHHHHHHHHHHCCTTEEEEEECSSC-----TTSEEEEEECSSCEEEEEEEECTTS---CEEECCSC
T ss_pred             cCCCCCccccCCCCHHHHHHHHhhcCCCCEEEEEeCCCC-----CCCEEEEEEECCEEEEEEEEEcCCC---CEEEeccC
Confidence            577889999999999999999986 78999999999744     5899999999999999999987666   799985  


Q ss_pred             ---ccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         160 ---SRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       160 ---~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                         ...|+||.+||+||+.++     .++.+.|..|+.+
T Consensus        77 g~~~~~F~sl~eLV~~y~~~~-----~~l~~~L~~P~~~  110 (119)
T 2ysx_A           77 GVSMRFFTKLDQLIEFYKKEN-----MGLVTHLQYPVPL  110 (119)
T ss_dssp             SSSCCCBSSHHHHHHHTTSSS-----SSSSSCCCEECCC
T ss_pred             CcCCcccCCHHHHHHHHhhCC-----CCCCeECCCcCCC
Confidence               368999999999999998     5788999999965

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.90  E-value=1.4e-23  Score=198.22  Aligned_cols=180  Identities=18%  Similarity=0.335  Sum_probs=131.0

Q ss_pred             CCcceeecCccC-cCCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEee-----CCeeeE
Q psy3210          70 GGNEWTAKSWAD-HENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKT-----DEKVKH  141 (272)
Q Consensus        70 ~~~g~~P~~~~~-~~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~-----~~~v~H  141 (272)
                      |..||+|+|+.. ..+++.++||||.|+|++||++|..  +.+|+||||.|+..     ++.|+|||+.     ++.|+|
T Consensus        46 g~~G~~P~~yv~~~~~le~~~w~~g~~~r~~ae~~L~~~~~~~G~FLvR~s~~~-----~g~y~lsv~~~~~~~~~~v~h  120 (452)
T 1fmk_A           46 GQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETT-----KGAYCLSVSDFDNAKGLNVKH  120 (452)
T ss_dssp             CCEEEEEGGGEEETTSGGGSTTEEETCCHHHHHHHHTCTTSCTTEEEEEECSSS-----TTCEEEEEEEEETTTEEEEEE
T ss_pred             CcccccCcccccccccccccccccCCccHHHHHHHhccCCCCCceEEEEeCCCC-----CCceEEEEEeeccCCCCcEEE
Confidence            567999999954 4678889999999999999999975  46799999999744     5899999997     568999


Q ss_pred             EEEEEecCCCcceEEeecccccchhhhhhhhhhccccccccccccccccccceeeeeeeeccCCCCCCCCCccCCCcEEE
Q psy3210         142 MKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVI  221 (272)
Q Consensus       142 ~~I~~~~~g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~~~~~alydf~~~~~~ELsl~~Gd~i~  221 (272)
                      |+|.+.++|   .|++.+...|.||.+||+||+.++     ++++..|..|+....... .   ....+.+.+...+ ++
T Consensus       121 ~~I~~~~~g---~~~~~~~~~F~Sl~~Li~~y~~~~-----~~l~~~l~~~~~~~~~~~-~---~~~~~~~~i~~~~-~~  187 (452)
T 1fmk_A          121 YKIRKLDSG---GFYITSRTQFNSLQQLVAYYSKHA-----DGLCHRLTTVCPTSKPQT-Q---GLAKDAWEIPRES-LR  187 (452)
T ss_dssp             EEEEECTTS---CEESSTTSEESSHHHHHHHHTTCC-----TTSSSCCCEECCCCCCCC-S---SSSTTCSBCCGGG-EE
T ss_pred             EEEEEcCCC---CEEEecCcccCCHHHHHHHhhhcc-----ccchhhcccccccccccc-C---CCCccccccChhH-ce
Confidence            999987766   799998889999999999999877     677777777764321110 0   0112222232222 23


Q ss_pred             EeeeeCCc--CCeEEEEeCCe--e--------eeeeccchhhhhhhccCCCCCcccce
Q psy3210         222 VLSKEGEQ--KGWWKGKIDER--V--------SYFFQLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       222 v~~k~ge~--~gwW~G~~~g~--~--------G~fP~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      +..+.|.+  ...|++...+.  .        ...+..|.+|+++|+++.|+|||++.
T Consensus       188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~  245 (452)
T 1fmk_A          188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY  245 (452)
T ss_dssp             EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             eeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEE
Confidence            33333332  23677776531  1        11234688999999999999999985

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=99.90  E-value=4.2e-24  Score=164.95  Aligned_cols=97  Identities=30%  Similarity=0.584  Sum_probs=86.7

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccC-CCceEEEEeCCCCCCCCCCCceEEEEee------CCeeeEEEEEEecCCCcceE
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLERE-ADGTYLLRIRPQGPTHPNETIYALSLKT------DEKVKHMKVYEKEMDGVPQY  155 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~-~~G~FLVR~s~~~~~~~~~~~y~LSv~~------~~~v~H~~I~~~~~g~~~~~  155 (272)
                      .+++.++||||.|+|++||++|... ++|+||||+|+ .     ++.|+|||+.      ++.|+||+|...++|   .|
T Consensus         6 ~~l~~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~-~-----~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g---~~   76 (110)
T 2ekx_A            6 SGLDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNSS-Q-----VGMYTVSLFSKAVNDKKGTVKHYHVHTNAEN---KL   76 (110)
T ss_dssp             SCTTTSSSBCCSCCHHHHHHHHHHTCCTTEEEEEECS-S-----TTCEEEEECCCCSSCSSCCCEEEECEECTTC---CE
T ss_pred             CcccCCCeecCCCCHHHHHHHHhccCCCceEEEEecC-C-----CCCEEEEEEeccccCCCCcEEEEEEEECCCC---CE
Confidence            6788999999999999999999875 89999999993 2     5899999997      468999999987666   79


Q ss_pred             Eeecccccchhhhhhhhhhccccccccccccccccccc
Q psy3210         156 FLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF  193 (272)
Q Consensus       156 ~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~  193 (272)
                      ++.+...|+||.+||+||+.++     +++.++|..|+
T Consensus        77 ~l~~~~~F~sl~~LV~~y~~~~-----~~l~~~L~~Pv  109 (110)
T 2ekx_A           77 YLAENYCFDSIPKLIHYHQHNS-----AGMITRLRHPV  109 (110)
T ss_dssp             ESSTTCCCSCHHHHHHHHHHSC-----CSSSCCCCEEC
T ss_pred             EECCCCccCCHHHHHHHHeeCC-----CCCceecCccC
Confidence            9987778999999999999998     68899999887

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A

Probab=99.90  E-value=7.2e-24  Score=165.27  Aligned_cols=100  Identities=24%  Similarity=0.357  Sum_probs=84.4

Q ss_pred             CCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEe-cCCCcceEE--e
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK-EMDGVPQYF--L  157 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~-~~g~~~~~~--i  157 (272)
                      ..++.++||||.|+|++||++|..  .++|+||||+|++.     ++.|+||++.++.|+||+|... ++|   .|+  +
T Consensus         9 ~~~~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~~g---~~~~~~   80 (117)
T 3pqz_A            9 AIHRTQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRN-----PQGFVLSLCHLQKVKHYLILPSEEEG---RLYFSM   80 (117)
T ss_dssp             CGGGGCTTBCCSCCHHHHHHHHHHTTCCTTEEEEEECCC------CCCEEEEEEETTEEEEEEEEEECCTT---CCEEES
T ss_pred             hhcccCccccCCCCHHHHHHHHhcCCCCCCEEEEEecCCC-----CCcEEEEEEeCCeeEEEEEEEecCCC---CEEEEE
Confidence            667889999999999999999975  56999999999743     5899999999999999999986 344   433  3


Q ss_pred             e-cccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         158 S-QSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       158 ~-~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      . ....|+||.|||+||+.++     +++++.|..||.+
T Consensus        81 ~~~~~~F~sl~~LV~~y~~~~-----~~l~~~L~~P~~~  114 (117)
T 3pqz_A           81 DDGQTRFTDLLQLVEFHQLNR-----GILPCLLRHCCTR  114 (117)
T ss_dssp             STTSSCBSSHHHHHHHHHHCC-----TTSSSCCCEECC-
T ss_pred             CCCCcccCCHHHHHHHHhhCC-----CCCcEECCCcCcc
Confidence            3 2468999999999999998     6899999999965

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A

Probab=99.90  E-value=9.6e-24  Score=164.00  Aligned_cols=109  Identities=24%  Similarity=0.288  Sum_probs=91.0

Q ss_pred             CCcceeecCccCcCCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecC
Q psy3210          70 GGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEM  149 (272)
Q Consensus        70 ~~~g~~P~~~~~~~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~  149 (272)
                      |.+|++|...   ..++.++||||.|+|++||++|.  ++|+||||+|++.     + .|+||++.++.|+||+|...+ 
T Consensus         1 ~~~g~vp~~~---~~l~~~~WyhG~isR~eAe~lL~--~~G~FLVR~S~~~-----~-~y~LSv~~~~~v~H~~I~~~~-   68 (114)
T 1wqu_A            1 GSSGSSGEVQ---KPLHEQLWYHGAIPRAEVAELLV--HSGDFLVRESQGK-----Q-EYVLSVLWDGLPRHFIIQSLD-   68 (114)
T ss_dssp             CCCCCCCGGG---SCGGGCTTEEESCCHHHHHTTCC--STTEEEEEECSSS-----C-CEEEEEEETTEEEEEECEECS-
T ss_pred             CCccccCCcc---cccccCCcEeeCCCHHHHHHHhc--cCCeEEEEEcCCC-----C-CEEEEEEECCEEEEEEEEecC-
Confidence            4678998877   78999999999999999999998  4899999999643     4 999999999999999998764 


Q ss_pred             CCcceEEeecccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         150 DGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       150 g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      +   .|.+.+ ..|+||.+||+||+.+.+... ..+.+.|..|+.+
T Consensus        69 g---~~~~~~-~~F~sl~~LV~~y~~~~~~~~-~~~~~~L~~Pv~r  109 (114)
T 1wqu_A           69 N---LYRLEG-EGFPSIPLLIDHLLSTQQPLT-KKSGVVLHRAVPS  109 (114)
T ss_dssp             S---SEESSS-CCBSSHHHHHHHHHHHCCCSC-TTTCCCCCEECCS
T ss_pred             C---EEEECC-CCCCCHHHHHHHHHHCCCCcC-CCCCcEECcccCC
Confidence            3   688865 579999999999998864321 3457788888854

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*

Probab=99.89  E-value=1.9e-23  Score=161.62  Aligned_cols=102  Identities=24%  Similarity=0.342  Sum_probs=82.9

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccC---CCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLERE---ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ  159 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~---~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~  159 (272)
                      .+++.++||||.|+|++||++|...   ++|+||||+|++.     ++.|+||++.++.|+||+|...++|   .|++. 
T Consensus         4 ~~l~~~~WyhG~isR~~Ae~lL~~~g~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~g---~~~l~-   74 (111)
T 2hdv_A            4 QPLSGYPWFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETR-----RGECVLTFNFQGKAKHLRLSLNAAG---QCRVQ-   74 (111)
T ss_dssp             CCGGGSTTEEEECCHHHHHHHHHTTGGGGTTEEEEEECSSC-----TTEEEEEEEETTEEEEEEEEECTTC---CEEET-
T ss_pred             cccccCCCcCCCCCHHHHHHHHHHcCCCCCCeEEEEecCCC-----CCCEEEEEEeCCeEEEEEEEEcCCC---CEEeC-
Confidence            6788999999999999999999864   8999999999754     5899999999999999999987666   78887 


Q ss_pred             ccccchhhhhhhhhhcccccccccc-ccccccccc
Q psy3210         160 SRYFRSIVELICCYERNSLIENFIG-LNVRLQLPF  193 (272)
Q Consensus       160 ~~~F~sL~eLV~~y~~~~L~~~~~~-l~~~L~~P~  193 (272)
                      ...|+||.+||+||+.+++.....+ ....|..++
T Consensus        75 ~~~F~sl~~LV~~y~~~~l~~~~~~~~~v~L~~~v  109 (111)
T 2hdv_A           75 HLHFQSIFDMLEHFRVHPIPLESGGSSDVVLVSYV  109 (111)
T ss_dssp             TEEESSHHHHHHHHTTSCCC-------CCCCCEEC
T ss_pred             CceeCCHHHHHHHHhhCCcccccCCccceEccccc
Confidence            5689999999999999998655443 344555443

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus}

Probab=99.89  E-value=1.5e-23  Score=168.23  Aligned_cols=106  Identities=29%  Similarity=0.432  Sum_probs=89.9

Q ss_pred             CCcccccEeeeeC-CHHHHHHhccc------CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceE
Q psy3210          83 ENLSEYLWFVGEM-GREKATSLLER------EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQY  155 (272)
Q Consensus        83 ~~l~~~~Wf~g~i-sR~~Ae~lL~~------~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~  155 (272)
                      ..++.++||||.| +|++||++|..      .++|+||||+|++.     ++.|+|||+.++.|+||+|...++++...|
T Consensus        17 ~~~~~~~WyhG~i~sR~eAe~lL~~~c~~~g~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~gg~~~~   91 (138)
T 2dx0_A           17 ELHFGEKWFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETF-----PNDYTLSFWRSGRVQHCRIRSTMENGVMKY   91 (138)
T ss_dssp             GTTSCCTTBCTTCCCHHHHHHHHHHHHTTTTCCTTCEEEEECSSS-----TTCEEEEEEETTEEEEEEEEEEEETTEEEE
T ss_pred             ccccCCCcccCCCCCHHHHHHHHHhhccccCCCCCEEEEEeCCCC-----CCCeEEEEEECCeEEEEEEEEecCCCceEE
Confidence            5678899999999 89999999984      68999999999743     589999999999999999998754322258


Q ss_pred             Eeecccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         156 FLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       156 ~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      ++.+...|+||.+||+||+.+++..  +++.+.|..|+.+
T Consensus        92 ~l~~~~~F~sl~eLI~~y~~~~l~~--~gl~~~L~~Pv~~  129 (138)
T 2dx0_A           92 YLTDNLTFNSIYALIQHYREAHLRC--AEFELRLTDPVPN  129 (138)
T ss_dssp             ESSTTSCBSSHHHHHHHTTTSCCCC--GGGSSCCCCBCC-
T ss_pred             EeCCCCcCCCHHHHHHHHhhCCCCC--CCcccccCccCCC
Confidence            8888889999999999999998753  4678899999864

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A

Probab=99.89  E-value=1.1e-23  Score=161.18  Aligned_cols=99  Identities=22%  Similarity=0.416  Sum_probs=81.5

Q ss_pred             cccccEeeeeCCHHHHHHhcccC--CCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEec-CCCcceEEeec-c
Q psy3210          85 LSEYLWFVGEMGREKATSLLERE--ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE-MDGVPQYFLSQ-S  160 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~~~--~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~-~g~~~~~~i~~-~  160 (272)
                      ++.++||||.|+|++||++|...  ++|+||||+|++.     ++.|+||++.++.|+||+|...+ +| ...|.+.+ .
T Consensus         2 h~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~-----~g~~~LSv~~~~~v~H~~I~~~~~~g-~~~~~~~~~~   75 (105)
T 1nrv_A            2 HRTQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSN-----PKAFVLTLCHHQKIKNFQILPCEDDG-QTFFSLDDGN   75 (105)
T ss_dssp             CTTSTTBCTTCCHHHHHHHHHHTTCCTTEEEEEECSSC-----TTCEEEEEEETTEEEEEEEEEC------CCEESSTTS
T ss_pred             CccCcccCCCCCHHHHHHHHHhcCCCCceEEEEeCCCC-----CCCEEEEEEeCCEEEEEEEEEEcCCC-CEEEEEcCCC
Confidence            35689999999999999999763  7999999999744     58999999999999999998854 33 11355653 4


Q ss_pred             cccchhhhhhhhhhccccccccccccccccccce
Q psy3210         161 RYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      ..|+||.+||+||+.++     +++.+.|..|+.
T Consensus        76 ~~F~sl~~LV~~y~~~~-----~~l~~~L~~p~~  104 (105)
T 1nrv_A           76 TKFSDLIQLVDFYQLNK-----GVLPCKLKHHCI  104 (105)
T ss_dssp             SCBSSHHHHHHHHTTCC-----TTSSSCCCEECC
T ss_pred             cccCCHHHHHHHhhhCC-----CCCcEeCCCcCC
Confidence            68999999999999988     688999999885

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens}

Probab=99.89  E-value=2.3e-23  Score=164.66  Aligned_cols=100  Identities=23%  Similarity=0.397  Sum_probs=84.7

Q ss_pred             cCCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEec-CCCcceEEe-
Q psy3210          82 HENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE-MDGVPQYFL-  157 (272)
Q Consensus        82 ~~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~-~g~~~~~~i-  157 (272)
                      ...++.++||||.|+|++||++|..  .++|+||||+|++.     ++.|+||++.++.|+||+|...+ +|   .|++ 
T Consensus        20 ~~~l~~~~WyhG~isR~eAe~lL~~~g~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~~G---~~~~~   91 (126)
T 2aug_A           20 HMIHRSQPWFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSN-----PKTFVLSMSHGQKIKHFQIIPVEDDG---EMFHT   91 (126)
T ss_dssp             --CGGGSTTEETTCCHHHHHHHHHTTTCCTTEEEEEECSSS-----SCCEEEEEEETTEEEEEEEEEEEETT---EEEEE
T ss_pred             ccccccCCcccCCCCHHHHHHHHhccCCCCCEEEEeecCCC-----CCCEEEEEEcCCeEEEEEEEEECCCC---eEEEE
Confidence            3678889999999999999999976  37999999999743     58999999999999999999853 44   6655 


Q ss_pred             -e-cccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         158 -S-QSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       158 -~-~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                       . ....|+||.|||+||+.++     .++.+.|..|+.
T Consensus        92 l~~~~~~F~SL~eLV~~y~~~~-----~~l~~~L~~P~~  125 (126)
T 2aug_A           92 LDDGHTRFTDLIQLVEFYQLNK-----GVLPCKLKHYCA  125 (126)
T ss_dssp             SSTTSSCBSSHHHHHHHHTTCC-----TTSSSCCCEECC
T ss_pred             eCCCCCccCCHHHHHHHHhhCC-----CCCceecCCCcC
Confidence             3 2468999999999999988     678999999985

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A*

Probab=99.89  E-value=1.2e-23  Score=160.85  Aligned_cols=101  Identities=25%  Similarity=0.341  Sum_probs=86.2

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      .+++.++||||.|+|++||++|.  ++|+||||+|++.     ++.|+||++.++.|+||+|. ..+|   .|.+.+ ..
T Consensus         2 ~~l~~~~Wyhg~isR~~Ae~lL~--~~G~FLVR~S~~~-----~g~~~LSv~~~~~v~H~~I~-~~~g---~~~~~~-~~   69 (104)
T 1mil_A            2 SQLRGEPWFHGKLSRREAEALLQ--LNGDFLVRESTTT-----PGQYVLTGLQSGQPKHLLLV-DPEG---VVRTKD-HR   69 (104)
T ss_dssp             CSTTTCTTBCSSCCHHHHHTTCC--STTEEEEEECCSS-----CSSEEEEEEETTEEEEEEEB-CTTS---SEECSS-CE
T ss_pred             CccccCCcCCCCCCHHHHHHHhc--cCCcEEEEeCCCC-----CCCEEEEEEECCEEEEEEEE-eCCC---EEEECC-ce
Confidence            46788999999999999999998  6899999999744     58999999999999999996 3344   688764 57


Q ss_pred             cchhhhhhhhhhcccccccccccccccccccee
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      |+||.+||+||+.+++....+++.+.|..|+.+
T Consensus        70 F~sl~~LI~~y~~~~~p~~~~g~~~~L~~Pv~r  102 (104)
T 1mil_A           70 FESVSHLISYHMDNHLPIISAGSELCLQQPVER  102 (104)
T ss_dssp             ESSHHHHHHHHHHHTCCEEETTEEECCCEECCC
T ss_pred             eCCHHHHHHHHhhCCCccccCCceEEeCccCCC
Confidence            999999999999998765556778889988864

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*

Probab=99.89  E-value=1.2e-23  Score=160.34  Aligned_cols=98  Identities=27%  Similarity=0.445  Sum_probs=82.0

Q ss_pred             ccccEeeeeCCHHHHHHhcc-cCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccc
Q psy3210          86 SEYLWFVGEMGREKATSLLE-READGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFR  164 (272)
Q Consensus        86 ~~~~Wf~g~isR~~Ae~lL~-~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~  164 (272)
                      +.++||||.|+|++||++|. ..++|+||||+|++.     ++.|+||++.++.|+||+|... +|   .|++.+ ..|+
T Consensus         3 ~~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~-----~g~~~LSv~~~~~v~H~~I~~~-~g---~~~l~~-~~F~   72 (102)
T 2cia_A            3 LGSEWYYGNVTRHQAECALNERGVEGDFLIRDSESS-----PSDFSVSLKASGKNKHFKVQLV-DN---VYCIGQ-RRFH   72 (102)
T ss_dssp             --CTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSS-----TTCEEEEECCSSSCEEEEEEEE-TT---EEEETT-EEES
T ss_pred             cCCccccCCCCHHHHHHHHhhCCCCcEEEEEECCCC-----CCCEEEEEEeCCeeEEEEEEec-CC---EEEECC-cCcC
Confidence            56799999999999999994 568999999999744     5899999999999999999954 44   799987 5799


Q ss_pred             hhhhhhhhhhccccccccccccccccccc
Q psy3210         165 SIVELICCYERNSLIENFIGLNVRLQLPF  193 (272)
Q Consensus       165 sL~eLV~~y~~~~L~~~~~~l~~~L~~P~  193 (272)
                      ||.+||+||+.++|.....+....|..|+
T Consensus        73 sl~~LV~~y~~~~l~~~~~~~~~~L~~Pi  101 (102)
T 2cia_A           73 TMDELVEHYKKAPIFTSEHGEKLYLVRAL  101 (102)
T ss_dssp             SHHHHHHHHHHSCSEECTTSCEECCCEEC
T ss_pred             CHHHHHHHHhhCccccCCCCceEEeCCCC
Confidence            99999999999998765445566677765

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens}

Probab=99.89  E-value=1.9e-23  Score=164.97  Aligned_cols=100  Identities=30%  Similarity=0.553  Sum_probs=88.7

Q ss_pred             cCCcccccEeeeeCCHHHHHHhcccC-CCceEEEEeCCCCCCCCCCCceEEEEee------CCeeeEEEEEEecCCCcce
Q psy3210          82 HENLSEYLWFVGEMGREKATSLLERE-ADGTYLLRIRPQGPTHPNETIYALSLKT------DEKVKHMKVYEKEMDGVPQ  154 (272)
Q Consensus        82 ~~~l~~~~Wf~g~isR~~Ae~lL~~~-~~G~FLVR~s~~~~~~~~~~~y~LSv~~------~~~v~H~~I~~~~~g~~~~  154 (272)
                      +.+++.++||||.|+|++||++|... ++|+||||+|+ .     ++.|+|||+.      ++.|+||+|...++|   .
T Consensus         5 ~~~l~~~~WyhG~isR~eAe~lL~~~g~~G~FLVR~Ss-~-----~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g---~   75 (125)
T 2ge9_A            5 EDSIEMYEWYSKHMTRSQAEQLLKQEGKEGGFIVRDSS-K-----AGKYTVSVFAKSTGDPQGVIRHYVVCSTPQS---Q   75 (125)
T ss_dssp             CCSSCCSSSEETTCCHHHHHHHHHHHTCTTEEEEEECS-S-----SCCEEEEEEESSSSSTTCEEEEEECEEETTT---E
T ss_pred             ccccccCCccccCCCHHHHHHHHhhcCCCceEEEEecC-C-----CCCEEEEEEeccccCCCCeEEEEEEEEcCCC---C
Confidence            36788999999999999999999865 88999999993 3     5899999997      479999999988766   8


Q ss_pred             EEeecccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         155 YFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       155 ~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      |++.+...|+||.+||+||+.++     +++.+.|..|+.+
T Consensus        76 ~~l~~~~~F~sl~eLV~~y~~~~-----~~l~~~L~~P~~~  111 (125)
T 2ge9_A           76 YYLAEKHLFSTIPELINYHQHNS-----AGLISRLKYPVSQ  111 (125)
T ss_dssp             EESSTTSCBSSHHHHHHHHHCCC-----TTCSCCSSEECCS
T ss_pred             EEECCCCcCCCHHHHHHHhhhCC-----CCCceeCCCccCC
Confidence            99988788999999999999998     6788999999864

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A

Probab=99.89  E-value=1.6e-23  Score=165.94  Aligned_cols=98  Identities=27%  Similarity=0.470  Sum_probs=86.2

Q ss_pred             cccccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec----
Q psy3210          85 LSEYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ----  159 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~----  159 (272)
                      ++.++||||.|+|++||++|.. .++|+||||+|++.     ++.|+||++.++.|+||+|...++|   .|++..    
T Consensus         1 l~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~g---~~~l~~~~g~   72 (128)
T 1ka6_A            1 MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESV-----PGVYCLCVLYHGYIYTYRVSQTETG---SWSAETAPGV   72 (128)
T ss_dssp             CCCCSSBCCSCCHHHHHHHHHHHCCTTCEEEEECSSS-----TTCEEEEEESSSCEEEEEEEECTTS---CEEEECSTTS
T ss_pred             CCCCcccCCCCCHHHHHHHHhcCCCCCEEEEeecCCC-----CCCEEEEEEeCCEEEEEEEEECCCC---eEEEeecCCC
Confidence            4678999999999999999964 48899999999743     5899999999999999999986666   799984    


Q ss_pred             -ccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         160 -SRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       160 -~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                       ...|+||.+||+||+.++     .++.+.|..|+.+
T Consensus        73 ~~~~F~sl~~LV~~y~~~~-----~gl~~~L~~P~~~  104 (128)
T 1ka6_A           73 HKRYFRKIKNLISAFQKPD-----QGIVIPLQYPVEK  104 (128)
T ss_dssp             CCCEESSHHHHHHHTTSSC-----SSSSSCCCSBCCS
T ss_pred             CCCccCCHHHHHHHHhhCC-----CCCcEEcCCcCCC
Confidence             568999999999999987     6789999999964

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.89  E-value=2.7e-23  Score=162.68  Aligned_cols=100  Identities=24%  Similarity=0.363  Sum_probs=86.6

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEee-ccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLS-QSR  161 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~-~~~  161 (272)
                      .+++.++||||.|+|++||++|+..++|+||||+|++.     ++ |+||++.++.|+||+|...++|   .|++. +..
T Consensus        11 ~~~~~~~WyhG~isR~~Ae~lL~~~~~G~FLVR~S~~~-----~~-y~LSv~~~~~v~H~~I~~~~~g---~~~l~~~~~   81 (119)
T 2cs0_A           11 AQDGVPEWFHGAISREDAENLLESQPLGSFLIRVSHSH-----VG-YTLSYKAQSSCCHFMVKLLDDG---TFMIPGEKV   81 (119)
T ss_dssp             CSSSCCSSBCSSCCHHHHHHHHHTSCTTCEEEEECSSS-----SS-EEEEECCSSSCEEEEEEECTTS---CEECTTCSC
T ss_pred             ccccCCCccccCCCHHHHHHHhcCCCCCEEEEEecCCC-----CC-EEEEEEECCEEEEEEEEEcCCC---cEEEecCCC
Confidence            67788999999999999999998888999999999754     46 9999999999999999987665   68886 466


Q ss_pred             ccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         162 YFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       162 ~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      .|+||.|||+||+.+++..    ..+.|..|+.+
T Consensus        82 ~F~sl~eLV~~y~~~~l~~----~~~~L~~P~~~  111 (119)
T 2cs0_A           82 AHTSLDALVTFHQQKPIEP----RRELLTQPCRQ  111 (119)
T ss_dssp             CBSSHHHHHHHHTTSCCSS----CCCCCCSBCCC
T ss_pred             cCCCHHHHHHHHhhCcCCC----CCCEeCccCCC
Confidence            8999999999999998742    34778899865

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens}

Probab=99.89  E-value=2e-23  Score=162.97  Aligned_cols=98  Identities=16%  Similarity=0.255  Sum_probs=81.9

Q ss_pred             CCcccccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEee---CCeeeEEEEEEecCCCcceEEee
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKT---DEKVKHMKVYEKEMDGVPQYFLS  158 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~---~~~v~H~~I~~~~~g~~~~~~i~  158 (272)
                      ..+..++||+|+|+|.+||.+|.. +.+|+||||+|+..      ..|+|||+.   ++.|+||+|.+. +|   .|+|+
T Consensus        10 ~~l~~epWff~~isR~eAE~lL~~~~~~GaFLVR~Se~~------~~ySLSVR~~~~~~~VKHYkI~~~-~G---~y~I~   79 (125)
T 3maz_A           10 DVLNPMPACFYTVSRKEATEMLQKNPSLGNMILRPGSDS------RNYSITIRQEIDIPRIKHYKVMSV-GQ---NYTIE   79 (125)
T ss_dssp             -CCCCCCTTBCCCCHHHHHHHHHHCGGGCSEEEEECTTS------SSEEEEEEECSSSCEEEEEEEEEE-TT---EEEEC
T ss_pred             ccccCCCCCcCCCCHHHHHHHHhccCCCCcEEEEeCCCC------CCEEEEEEecCCCCCEeeeEEEEe-CC---EEEEe
Confidence            667789999999999999998854 45899999999632      389999998   579999999998 45   79998


Q ss_pred             c--ccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         159 Q--SRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       159 ~--~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      .  ...|+||.|||+||++++     ++++++|..|+.+
T Consensus        80 ~~~~~~F~SL~eLV~yY~~~a-----dGl~~~L~~~c~~  113 (125)
T 3maz_A           80 LEKPVTLPNLFSVIDYFVKET-----RGNLRPFIASTDE  113 (125)
T ss_dssp             SSSCEEESSHHHHHHHHHHHT-----TTCCCBCCC----
T ss_pred             cCCCcCcCCHHHHHHHHHhCC-----CcCcccccccccc
Confidence            4  457999999999999999     8999999999954

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.89  E-value=3.6e-23  Score=199.58  Aligned_cols=180  Identities=18%  Similarity=0.337  Sum_probs=129.3

Q ss_pred             CCcceeecCccC-cCCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEee-----CCeeeE
Q psy3210          70 GGNEWTAKSWAD-HENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKT-----DEKVKH  141 (272)
Q Consensus        70 ~~~g~~P~~~~~-~~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~-----~~~v~H  141 (272)
                      |..||+|+||.+ ...++.++||||.|+|++||++|+.  +.+|+||||.|+..     ++.|+|||+.     ++.|+|
T Consensus       129 g~~G~~P~~yv~~~~~l~~~~wy~g~i~r~~ae~~L~~~~~~~G~FLvR~S~~~-----~g~y~lsv~~~~~~~~~~v~h  203 (535)
T 2h8h_A          129 GQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETT-----KGAYCLSVSDFDNAKGLNVKH  203 (535)
T ss_dssp             CCEEEEEGGGEEETTSGGGSTTBCCSCCHHHHHHHHTCTTCCTTEEEEEECSSS-----TTCEEEEEEEEETTTEEEEEE
T ss_pred             CcceEecchhhcccccccccceeccccCHHHHHHHhccCCCCCCeEEEEecCCC-----CCcEEEEEEeeccCCCCceEE
Confidence            557999999955 4567889999999999999999975  46799999999743     6899999996     568999


Q ss_pred             EEEEEecCCCcceEEeecccccchhhhhhhhhhccccccccccccccccccceeeeeeeeccCCCCCCCCCccCCCcEEE
Q psy3210         142 MKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVI  221 (272)
Q Consensus       142 ~~I~~~~~g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~~~~~alydf~~~~~~ELsl~~Gd~i~  221 (272)
                      |+|...++|   .|++.....|.||.+||+||+.+.     ++++..|..++...... ...   ...+++.+...+ ++
T Consensus       204 ~~I~~~~~g---~~~i~~~~~F~SL~eLv~~y~~~~-----~~~~~~l~~~~~~~~~~-~~~---~~~~~~~i~~~~-~~  270 (535)
T 2h8h_A          204 YKIRKLDSG---GFYITSRTQFNSLQQLVAYYSKHA-----DGLCHRLTTVCPTSKPQ-TQG---LAKDAWEIPRES-LR  270 (535)
T ss_dssp             EEEBC-CCS---CEEEETTEEESSHHHHHHHHHHCC-----TTSSSCCCEECCCCCCC-CSS---SSTTCSBCCGGG-EE
T ss_pred             EEEEEcCCC---cEEeeccccccChHHhheeecccc-----Ccccccccccccccccc-ccc---cCccceecchhh-hh
Confidence            999987666   799988889999999999999877     67777777776432111 000   112222232222 23


Q ss_pred             EeeeeCCc--CCeEEEEeCCe--e--------eeeeccchhhhhhhccCCCCCcccce
Q psy3210         222 VLSKEGEQ--KGWWKGKIDER--V--------SYFFQLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       222 v~~k~ge~--~gwW~G~~~g~--~--------G~fP~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      +..++|.+  ...|++...+.  .        ......|++|+++|+++.|+|||++.
T Consensus       271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~  328 (535)
T 2h8h_A          271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY  328 (535)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             hheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEE
Confidence            33333332  23677776531  1        11234689999999999999999985

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus}

Probab=99.89  E-value=3.5e-23  Score=163.13  Aligned_cols=100  Identities=31%  Similarity=0.591  Sum_probs=87.3

Q ss_pred             cCCcccccEeeeeCCHHHHHHhcccC-CCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc
Q psy3210          82 HENLSEYLWFVGEMGREKATSLLERE-ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS  160 (272)
Q Consensus        82 ~~~l~~~~Wf~g~isR~~Ae~lL~~~-~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~  160 (272)
                      +..++.++||||.|+|++||++|... .+|+||||+|+ .     ++.|+||++.++.|+||+|... ++   .|.+.+.
T Consensus        13 ~~~l~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~-~-----~g~y~LSv~~~~~v~H~~I~~~-~~---~~~~~~~   82 (124)
T 2eob_A           13 PNPHESKPWYYDRLSRGEAEDMLMRIPRDGAFLIRKRE-G-----TDSYAITFRARGKVKHCRINRD-GR---HFVLGTS   82 (124)
T ss_dssp             SCSTTTSTTEESSCCHHHHHHHHHHCCSSSEEEEECCT-T-----SSCEEEEEEETTEEEEEEEEES-SS---CEESSSS
T ss_pred             ccccCcCCCeecCCCHHHHHHHHhcCCCCCEEEEEecC-C-----CCCEEEEEEeCCeEEEEEEEEC-CC---EEEECCC
Confidence            46788899999999999999999876 58999999996 4     5999999999999999999874 33   7888877


Q ss_pred             cccchhhhhhhhhhccccccccccccccccccceee
Q psy3210         161 RYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI  196 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~~  196 (272)
                      ..|+||.|||+||+.+++     .+.+.|..|+.+.
T Consensus        83 ~~F~sl~~LV~~y~~~~~-----~~~~~L~~P~~~~  113 (124)
T 2eob_A           83 AYFESLVELVSYYEKHAL-----YRKMRLRYPVTPE  113 (124)
T ss_dssp             CCBSSHHHHHHHHTTSCS-----SSSCCSCEECCHH
T ss_pred             CcCCCHHHHHHHHhhCCC-----CCCcCCCCcCCcH
Confidence            679999999999999985     5688899998654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.89  E-value=4e-23  Score=195.07  Aligned_cols=193  Identities=17%  Similarity=0.309  Sum_probs=139.0

Q ss_pred             CCcccccCCCC----------------CCCCcceeecCccC-cCCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeC
Q psy3210          57 PPLMDIAGAAQ----------------PLGGNEWTAKSWAD-HENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIR  117 (272)
Q Consensus        57 pp~~~~~~~~~----------------~~~~~g~~P~~~~~-~~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s  117 (272)
                      +.-++|..||.                ..|..|++|+|+.. ..+++.++||||.|+|++||++|..  ..+|+||||.|
T Consensus        22 ~~el~~~~gd~~~v~~~~~~W~~~~~~~~g~~G~~P~~yv~~~~~le~~~W~~g~i~r~~ae~~L~~~~~~~G~FLvR~s  101 (454)
T 1qcf_A           22 HEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDS  101 (454)
T ss_dssp             TTBCCBCTTCEEEEEECCTTEEEEEETTTCCEEEEEGGGEEETTCGGGSTTEETTCCHHHHHHHHHSTTCCTTCEEEEEC
T ss_pred             CCcCcccCCCEEEEEecCCCCeEEEECCCCceEEecchhcccccccccccccccccchhhhhhhhhcCCCCCceEEEEEC
Confidence            34677777773                24568999999954 4578889999999999999999954  67899999999


Q ss_pred             CCCCCCCCCCceEEEEee-----CCeeeEEEEEEecCCCcceEEeecccccchhhhhhhhhhcccccccccccccccccc
Q psy3210         118 PQGPTHPNETIYALSLKT-----DEKVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP  192 (272)
Q Consensus       118 ~~~~~~~~~~~y~LSv~~-----~~~v~H~~I~~~~~g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P  192 (272)
                      +..     ++.|+||++.     ++.|+||+|...+++   .|++.....|.++.+||+||+...     +++...+..|
T Consensus       102 ~~~-----~g~y~lsv~~~~~~~~~~v~H~~I~~~~~g---~~~i~~~~~F~sl~eLv~~y~~~~-----~~l~~~~~~~  168 (454)
T 1qcf_A          102 ETT-----KGSYSLSVRDYDPRQGDTVKHYKIRTLDNG---GFYISPRSTFSTLQELVDHYKKGN-----DGLCQKLSVP  168 (454)
T ss_dssp             SSS-----TTSEEEEEEEEETTTEEEEEEEEEEECTTS---CEESSSSSCBSSHHHHHHHHTSSC-----TTSSSCCCSB
T ss_pred             cCC-----CCeEEEEEEecccCCCCceEEEEEEEcCCC---cEEEeCccccCCHHHHHHHHHhcc-----CCcccccccc
Confidence            744     5899999998     678999999987766   788988888999999999999876     6777777777


Q ss_pred             ceeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCc--CCeEEEEeCCe--e--------eeeeccchhhhhhhccCCC
Q psy3210         193 FRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQ--KGWWKGKIDER--V--------SYFFQLYWGNFRLLSSLFI  260 (272)
Q Consensus       193 ~~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~--~gwW~G~~~g~--~--------G~fP~~yVeE~~~mk~l~h  260 (272)
                      +........+.     .+++.+...+ +.+....|.+  ...|++..++.  .        ......|++|+++|+++.|
T Consensus       169 ~~~~~~~~~~~-----~~~~~i~~~~-~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h  242 (454)
T 1qcf_A          169 CMSSKPQKPWE-----KDAWEIPRES-LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH  242 (454)
T ss_dssp             CCCCCCCCCCC-----TTCSBCCGGG-EEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCC
T ss_pred             ccccCcccccc-----ccceeechHH-eEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCC
Confidence            64322111121     2222332222 2333344432  23677776421  1        1123468899999999999


Q ss_pred             CCccccee
Q psy3210         261 VPPVRLSW  268 (272)
Q Consensus       261 ~~~v~~~~  268 (272)
                      +|||++.-
T Consensus       243 ~~iv~l~~  250 (454)
T 1qcf_A          243 DKLVKLHA  250 (454)
T ss_dssp             TTBCCEEE
T ss_pred             CCEeeEEE
Confidence            99999863

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B

Probab=99.89  E-value=1.6e-23  Score=163.41  Aligned_cols=99  Identities=28%  Similarity=0.480  Sum_probs=86.5

Q ss_pred             CCcccccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeC------CeeeEEEEE--EecCCCcc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTD------EKVKHMKVY--EKEMDGVP  153 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~------~~v~H~~I~--~~~~g~~~  153 (272)
                      .+++.++||||.|+|++||++|.. .++|+||||+| +.     ++.|+|||+..      +.|+||+|.  ...+|   
T Consensus         4 ~~l~~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S-~~-----~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~~~g---   74 (118)
T 3s9k_A            4 NNLETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDS-RT-----PGTYTVSVFTKAIISENPCIKHYHIKETNDSPK---   74 (118)
T ss_dssp             -CGGGSTTBCTTCCHHHHHHHHHHHCCTTCEEEEEC-SS-----TTCEEEEEEECCSCSSSCEEEEEEEEECSCSSC---
T ss_pred             cccccCceecCCCCHHHHHHHHHhcCCCCeEEEEee-CC-----CCCEEEEEEecccccCCCceEEEEEeEEECCCC---
Confidence            678999999999999999999976 46999999999 44     58999999996      899999995  34455   


Q ss_pred             eEEeecccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         154 QYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       154 ~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      .|++.+...|+||.+||+||+.++     +++.+.|..|+.+
T Consensus        75 ~~~~~~~~~F~sl~~LV~~y~~~~-----~~l~~~L~~Pv~~  111 (118)
T 3s9k_A           75 RYYVAEKYVFDSIPLLIQYHQYNG-----GGLVTRLRYPVCG  111 (118)
T ss_dssp             CEEEECSCCCSCHHHHHHHHHHCC-----TTSSSCCCCCCCC
T ss_pred             CEEECCCcccCCHHHHHHHheeCC-----CCCccCCCCcCCC
Confidence            789988888999999999999998     6889999999965

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*

Probab=99.89  E-value=1.8e-23  Score=158.68  Aligned_cols=88  Identities=24%  Similarity=0.450  Sum_probs=78.3

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      .+++.++||||.|+|++||++|...++|+||||+|++.     ++.|+||++.++.|+||+|...++|   .|++.+ ..
T Consensus         4 i~l~~~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~-----~g~~~LSv~~~~~v~H~~I~~~~~g---~~~l~~-~~   74 (100)
T 1r1p_A            4 IDIEFPEWFHEGLSRHQAENLLMGKDIGFFIIRASQSS-----PGDFSISVRHEDDVQHFKVMRDTKG---NYFLWT-EK   74 (100)
T ss_dssp             --CTTTTTSCTTCCHHHHHHHHHTSCTTBEEEEECSSS-----TTCEEEEEECSSSEEEEECEECTTC---CEESSS-CE
T ss_pred             cEeccCCccccCCCHHHHHHHhcCCCCCEEEEEecCCC-----CCCEEEEEEECCEEEEEEEEEcCCC---CEEEeC-CE
Confidence            57899999999999999999998888999999999754     5899999999999999999987665   788886 57


Q ss_pred             cchhhhhhhhhhccccc
Q psy3210         163 FRSIVELICCYERNSLI  179 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~  179 (272)
                      |+||.|||+||+.+++.
T Consensus        75 F~sl~~LV~~y~~~~l~   91 (100)
T 1r1p_A           75 FPSLNKLVDYYRTTSIS   91 (100)
T ss_dssp             ESSHHHHHHHHTTSCSS
T ss_pred             eCCHHHHHHHHHhCCCC
Confidence            99999999999999875

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.89  E-value=3e-23  Score=162.41  Aligned_cols=100  Identities=22%  Similarity=0.443  Sum_probs=87.6

Q ss_pred             cCCcccccEeeeeCCHHHHHHhcccC-CCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc
Q psy3210          82 HENLSEYLWFVGEMGREKATSLLERE-ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS  160 (272)
Q Consensus        82 ~~~l~~~~Wf~g~isR~~Ae~lL~~~-~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~  160 (272)
                      ...++.++||||.|+|++||++|+.. .+|+||||+|++.     ++.|+||++.++.|+||+|...++|   .|++.+ 
T Consensus        10 ~~~l~~~~WyhG~isR~~Ae~lL~~~g~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~g---~~~l~~-   80 (119)
T 2gsb_A           10 EDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNT-----PGDYSLYFRTNENIQRFKICPTPNN---QFMMGG-   80 (119)
T ss_dssp             CCSGGGCSSBCCSSCHHHHHHHHHHTCCSSEEEEEECSSS-----TTCEEEEEECSSCBCCCCEEEETTT---EEEESS-
T ss_pred             CcccccCCcccCCCCHHHHHHHHhhcCCCCeEEEEeCCCC-----CCceEEEEEECCEEEEEEEEEcCCC---CEEECC-
Confidence            36788999999999999999999864 7899999999744     5899999999999999999987776   788875 


Q ss_pred             cccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         161 RYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      ..|+||.|||+||+.+++     .+.+.|..|+.+
T Consensus        81 ~~F~sl~~LI~~y~~~~l-----~~~~~L~~Pv~~  110 (119)
T 2gsb_A           81 RYYNSIGDIIDHYRKEQI-----VEGYYLKEPVPM  110 (119)
T ss_dssp             CCBSCHHHHHHHHTTSCS-----BTTBCCCCCCCC
T ss_pred             cccCCHHHHHHHHhhCcc-----CCCCEeCCccCC
Confidence            579999999999999985     466788999864

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A

Probab=99.89  E-value=2.3e-23  Score=160.50  Aligned_cols=103  Identities=23%  Similarity=0.371  Sum_probs=83.6

Q ss_pred             CcccccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          84 NLSEYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      .++.++||||.|+|++||++|.. .++|+||||+|++.     ++.|+||++.++.|+||+|... ++   .|.+.+...
T Consensus         3 ~l~~~~Wyhg~isr~~Ae~lL~~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~-~~---~~~~~~~~~   73 (109)
T 3tkz_A            3 HMTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSN-----PGDFTLSVRRNGAVTHIKIQNT-GD---YYDLYGGEK   73 (109)
T ss_dssp             ----CCSBCTTCCHHHHHHHHHHHCCTTEEEEEECSSS-----TTCEEEEEEETTEEEEEEEEEC-SS---CEESSSSCC
T ss_pred             ccccCCceecCCCHHHHHHHHhcCCCCCEEEEEecCCC-----CCCEEEEEEECCEEEEEEEEeC-CC---EEEecCCcc
Confidence            46789999999999999999976 47999999999744     5999999999999999999875 33   687877778


Q ss_pred             cchhhhhhhhhhccccc-ccccccccccccccee
Q psy3210         163 FRSIVELICCYERNSLI-ENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~-~~~~~l~~~L~~P~~~  195 (272)
                      |+||.+||+||+.+++. ....++.+.|..|+.+
T Consensus        74 F~sl~~LV~~y~~~~~~l~~~~gl~~~L~~Pv~~  107 (109)
T 3tkz_A           74 FATLAELVQYYMEHHGQLKEKNGDVIELKYPLNC  107 (109)
T ss_dssp             BSSHHHHHHHHHHSTTSEEETTSCBCCCCEECC-
T ss_pred             cCCHHHHHHHHHhCcCccccCCCceEECCCcccC
Confidence            99999999999998743 2235677889988854

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.89  E-value=1.6e-23  Score=165.27  Aligned_cols=100  Identities=28%  Similarity=0.529  Sum_probs=88.3

Q ss_pred             cCCcccccEeeeeCCHHHHHHhcccC-CCceEEEEeCCCCCCCCCCCceEEEEee------CCeeeEEEEEEecCCCcce
Q psy3210          82 HENLSEYLWFVGEMGREKATSLLERE-ADGTYLLRIRPQGPTHPNETIYALSLKT------DEKVKHMKVYEKEMDGVPQ  154 (272)
Q Consensus        82 ~~~l~~~~Wf~g~isR~~Ae~lL~~~-~~G~FLVR~s~~~~~~~~~~~y~LSv~~------~~~v~H~~I~~~~~g~~~~  154 (272)
                      +.+++.++||||.|+|++||++|... ++|+||||+|+ .     ++.|+|||+.      ++.|+||+|...++|   .
T Consensus        10 ~~~l~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~-~-----~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g---~   80 (125)
T 2dm0_A           10 ITNLEIYEWYHRNITRNQAEHLLRQESKEGAFIVRDSR-H-----LGSYTISVFMGARRSTEAAIKHYQIKKNDSG---Q   80 (125)
T ss_dssp             SCCCTTSSSBCCSCCHHHHHHHHHHHCSTTCBCEEEET-T-----EEEEEEEEECCCSSSSSCCEEEEEEEECTTC---C
T ss_pred             ccccccCCcccCCCCHHHHHHHHhhcCCCCEEEEEecC-C-----CCCEEEEEEeccccCCCCcEEEEEEEEcCCC---C
Confidence            46889999999999999999999754 88999999993 3     5899999998      468999999987666   7


Q ss_pred             EEeecccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         155 YFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       155 ~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      |++.+...|+||.+||+||+.++     +++.+.|..|+.+
T Consensus        81 ~~l~~~~~F~sl~eLV~~y~~~~-----~~l~~~L~~P~~~  116 (125)
T 2dm0_A           81 WYVAERHAFQSIPELIWYHQHNA-----AGLMTRLRYPVGL  116 (125)
T ss_dssp             EESSSSCCCSSHHHHHHHHTTCC-----CSSSCCCCSBCCS
T ss_pred             EEECCCCccCCHHHHHHHhhhCC-----CCCccCCCCccCC
Confidence            99987778999999999999998     6789999999864

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*

Probab=99.88  E-value=6.8e-23  Score=154.41  Aligned_cols=84  Identities=31%  Similarity=0.536  Sum_probs=75.2

Q ss_pred             cccEeeeeCCHHHHHHhcccCC-CceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccch
Q psy3210          87 EYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRS  165 (272)
Q Consensus        87 ~~~Wf~g~isR~~Ae~lL~~~~-~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~s  165 (272)
                      .++||||.|+|++||++|...+ +|+||||+|++.     ++.|+||++.++.|+||+|...++|   .|++.+ ..|+|
T Consensus         2 ~~~Wyhg~isR~~Ae~lL~~~~~~G~FLVR~S~~~-----~g~~~LSv~~~~~v~H~~I~~~~~g---~~~l~~-~~F~s   72 (96)
T 1jyr_A            2 SMAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESA-----PGDFSLSVKFGNDVQHFKVLRDGAG---KYFLWV-VKFNS   72 (96)
T ss_dssp             CCTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSS-----TTCEEEEEEETTEEEEEECEECTTS---CEESSS-CEESS
T ss_pred             CcceeccCCCHHHHHHHHhcCCCCcEEEEEecCCC-----CCCEEEEEEeCCeEEEEEEEEcCCC---CEEECC-cccCC
Confidence            3689999999999999998865 999999999754     5899999999999999999987665   799986 57999


Q ss_pred             hhhhhhhhhccccc
Q psy3210         166 IVELICCYERNSLI  179 (272)
Q Consensus       166 L~eLV~~y~~~~L~  179 (272)
                      |.|||+||+.+++.
T Consensus        73 l~~LV~~y~~~~l~   86 (96)
T 1jyr_A           73 LNELVDYHRSTSVS   86 (96)
T ss_dssp             HHHHHHHTTSSCSC
T ss_pred             HHHHHHHHhhCCCC
Confidence            99999999999975

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.88  E-value=5.6e-23  Score=193.95  Aligned_cols=181  Identities=21%  Similarity=0.291  Sum_probs=128.5

Q ss_pred             CCcceeecCccCc-------CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEE
Q psy3210          70 GGNEWTAKSWADH-------ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM  142 (272)
Q Consensus        70 ~~~g~~P~~~~~~-------~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~  142 (272)
                      |..|++|+||..+       .+++.++||||.|+|++||++|....+|+||||.|++     .++.|+||++.++.|+||
T Consensus        55 g~~G~~P~~yv~~~~~~~~~~~~~~~~wyhg~i~r~~ae~~L~~~~~G~FlvR~S~~-----~~g~~~Lsv~~~~~v~H~  129 (450)
T 1k9a_A           55 GREGIIPANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLYPPETGLFLVRESTN-----YPGDYTLCVSCEGKVEHY  129 (450)
T ss_dssp             CCEEEEEGGGEEECCCCCCCTTEESCTTBCTTCCHHHHHHHTCSCCTTEEEEEECSS-----STTSEEEEEECSSSEEEE
T ss_pred             CceeeechhccccccccccccccccccccccCcCHHHhhhhhccCCCceEEEEecCC-----CCCceEEEEEeCCeeeEE
Confidence            5679999999443       3468889999999999999999877889999999974     468999999999999999


Q ss_pred             EEEEecCCCcceEEeecccccchhhhhhhhhhccccccccccccccccccceeee-eeeeccCCCCCCCCCccCCCcEEE
Q psy3210         143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQII-AVAEFDFCPTEANQLPLKQGCQVI  221 (272)
Q Consensus       143 ~I~~~~~g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~~~-~~alydf~~~~~~ELsl~~Gd~i~  221 (272)
                      +|...++    .|++.+...|.++.+||+||+.+.     +++.+.|..|..... ..+...+.   .+++.+...+ ++
T Consensus       130 ~I~~~~~----~~~i~~~~~F~sl~eLv~~y~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~i~~~~-~~  196 (450)
T 1k9a_A          130 RIMYHAS----KLSIDEEVYFENLMQLVEHYTTDA-----DGLCTRLIKPKVMEGTVAAQDEFY---RSGWALNMKE-LK  196 (450)
T ss_dssp             EEEEETT----EEESSSSSCBSSHHHHHHHHHHCC-----TTSSSCCCEECCCTTCEEHHHHHH---HTTCBCCGGG-EE
T ss_pred             EEEecCC----ceEeccccccccHHHHHhhhcccc-----cchhhhccccccccCcccchhhhc---ccccccChHH-eE
Confidence            9966544    789988889999999999999877     677777776663211 11111110   1111122111 12


Q ss_pred             EeeeeCCc--CCeEEEEeCCee--------eeeeccchhhhhhhccCCCCCccccee
Q psy3210         222 VLSKEGEQ--KGWWKGKIDERV--------SYFFQLYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       222 v~~k~ge~--~gwW~G~~~g~~--------G~fP~~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      +....|.+  ...|++...|+.        .-....|++|+++|+++.|+|||++.-
T Consensus       197 ~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~  253 (450)
T 1k9a_A          197 LLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLG  253 (450)
T ss_dssp             EEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             EEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEE
Confidence            23333322  236777766521        112346889999999999999999863

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}

Probab=99.87  E-value=2.5e-22  Score=156.38  Aligned_cols=100  Identities=24%  Similarity=0.315  Sum_probs=84.4

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      ..++.++||||.|+|++||++|.  ++|+||||+|++.     ++.|+|||+.++.|+||+|... +|   .|.+.+ ..
T Consensus        12 ~~~~~~~WyhG~isR~eAe~lL~--~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~-~g---~y~~~~-~~   79 (116)
T 2kk6_A           12 KPLAEQDWYHGAIPRIEAQELLK--KQGDFLVRESHGK-----PGEYVLSVYSDGQRRHFIIQYV-DN---MYRFEG-TG   79 (116)
T ss_dssp             CCTTTCTTEEESCCHHHHHHTCC--STTCEEEEECTTC-----TTCEEEEEEETTEEEEEEEEEE-TT---EEESSS-CE
T ss_pred             cccccCCCccCCCCHHHHHHHhc--cCCcEEEEECCCC-----CCcEEEEEEECCeEEEEEEEec-CC---EEEECC-CE
Confidence            56778899999999999999998  5899999999754     5899999999999999999964 44   788864 57


Q ss_pred             cchhhhhhhhhhcccccccccccccccccccee
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      |+||.|||+||+.+++... .++.+.|..|+.+
T Consensus        80 F~sl~eLV~~y~~~~~~i~-~~~~~~L~~Pv~r  111 (116)
T 2kk6_A           80 FSNIPQLIDHHYTTKQVIT-KKSGVVLLNPIPK  111 (116)
T ss_dssp             ESCHHHHHHHHHHTTCCSC-TTTTCCCCSCCCC
T ss_pred             eCCHHHHHHHHhhCCCCcc-CCCCCeECcccCC
Confidence            9999999999999875432 3466788999854

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} SCOP: d.93.1.1 PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ...

Probab=99.87  E-value=1.3e-22  Score=158.25  Aligned_cols=88  Identities=30%  Similarity=0.512  Sum_probs=77.9

Q ss_pred             CcccccEeeeeCCHHHHHHhcccC-CCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          84 NLSEYLWFVGEMGREKATSLLERE-ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~~-~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      +++.++||||.|+|++||++|... ++|+||||+|++.     ++.|+||++.++.|+||+|...++|   .|++.+ ..
T Consensus         2 ~L~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~g---~~~l~~-~~   72 (117)
T 3ov1_A            2 EMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESA-----PGDFSLSVKFGNDVQHFKVLRDGAG---KYFLWV-VK   72 (117)
T ss_dssp             -CCCCTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSS-----TTCEEEEEEETTEEEEEECEECTTS---CEESSS-CE
T ss_pred             CcccCCcccCCCCHHHHHHHHhCCCCCCcEEEEeCCCC-----CCCEEEEEecCCceEEEEEEECCCC---eEEECC-CC
Confidence            577899999999999999999874 6899999999744     5899999999999999999887666   799987 57


Q ss_pred             cchhhhhhhhhhcccccc
Q psy3210         163 FRSIVELICCYERNSLIE  180 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~  180 (272)
                      |+||.+||+||+.++|..
T Consensus        73 F~sl~eLV~~y~~~~l~~   90 (117)
T 3ov1_A           73 FNSLNELVDYHRSTSVSR   90 (117)
T ss_dssp             ESSHHHHHHHTTTSCSCS
T ss_pred             cCCHHHHHHHHhhCCCCC
Confidence            999999999999999853

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A

Probab=99.87  E-value=1e-22  Score=161.92  Aligned_cols=98  Identities=22%  Similarity=0.408  Sum_probs=85.6

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeC---------------CeeeEEEEEEe
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTD---------------EKVKHMKVYEK  147 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~---------------~~v~H~~I~~~  147 (272)
                      ..++.++||||.|+|++||++|...++|+||||+|++.     ++.|+|||+..               +.|+||+|...
T Consensus        15 ~~~~~~~Wyhg~isR~eAe~lL~~~~~G~FLVR~S~s~-----~g~y~LSv~~~~~~~~~~~~~g~~~~~~v~H~~I~~~   89 (131)
T 2kno_A           15 GSDTSKFWYKPHLSRDQAIALLKDKDPGAFLIRDSHSF-----QGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLIETG   89 (131)
T ss_dssp             CCCCHHHHBCTTCCHHHHHHHHTTSCTTBEEEEECSSS-----TTEEEEEEECSCCSSSSSSCCSCHHHHHEEEEEEECC
T ss_pred             cccccCCceecCCCHHHHHHHhcCCCCCeEEEecCCCC-----CCCEEEEEEeCCCCcccccccccccCCceEEEEEEEC
Confidence            56788899999999999999998888999999999744     59999999996               38999999886


Q ss_pred             cCCCcceEEe---ecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         148 EMDGVPQYFL---SQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       148 ~~g~~~~~~i---~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      ++|    |+|   .....|+||.+||+||+.++     .+++++|..|++
T Consensus        90 ~~g----~~l~g~~~~~~F~SL~eLV~~y~~~~-----~~L~~~L~~P~~  130 (131)
T 2kno_A           90 PKG----VKIKGCPSEPYFGSLSALVSQHSISP-----ISLPCCLRIPSK  130 (131)
T ss_dssp             SSC----CCEETCSSCCCCCSHHHHHHTTTTCC-----SSCSSCCBCSSC
T ss_pred             CCC----CEEecCCCCCccCCHHHHHHHHhhCC-----CCCCeECCCcCC
Confidence            653    777   45668999999999999999     589999999974

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.87  E-value=5.1e-22  Score=194.63  Aligned_cols=99  Identities=24%  Similarity=0.387  Sum_probs=87.3

Q ss_pred             cCCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec
Q psy3210          82 HENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ  159 (272)
Q Consensus        82 ~~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~  159 (272)
                      ...++.++||||.|+|++||++|..  .++|+||||+|+      .++.|+|||+.++.|+||+|.+..+|   .|++.+
T Consensus       155 ~~~~~~~~wyhg~i~r~~ae~~L~~~~~~~G~FLvR~s~------~~~~~~lsv~~~~~v~h~~I~~~~~g---~~~~~~  225 (613)
T 2ozo_A          155 TTAHERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRK------EQGTYALSLIYGKTVYHYLISQDKAG---KYCIPE  225 (613)
T ss_dssp             TSCTTTSTTBCTTCCHHHHHHHHSSSCCCTTCEEEEECS------STTEEEEEEEETTEEEEEEEEECTTC---CEECTT
T ss_pred             ccccccCCccccCCCHHHHHHHHhhcCCCCceEEEEecC------CCCCEEEEEEECCeEEEEEEEECCCC---CEEECC
Confidence            3678889999999999999999974  579999999993      25899999999999999999987666   799987


Q ss_pred             ccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         160 SRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       160 ~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      ...|+||.+||+||+.++     +++.+.|..||.
T Consensus       226 ~~~F~sl~~Lv~~y~~~~-----~~l~~~L~~pC~  255 (613)
T 2ozo_A          226 GTKFDTLWQLVEYLKLKA-----DGLIYCLKEACP  255 (613)
T ss_dssp             SCEESSHHHHHHHHHHCC-----TTCSSCCCSBCC
T ss_pred             CCCcCCHHHHHHHHhhCC-----CCceeccccccc
Confidence            788999999999999988     678888887774

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=99.87  E-value=2.2e-22  Score=155.04  Aligned_cols=94  Identities=22%  Similarity=0.392  Sum_probs=78.9

Q ss_pred             cEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCc--------------ce
Q psy3210          89 LWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGV--------------PQ  154 (272)
Q Consensus        89 ~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~--------------~~  154 (272)
                      +||||.|+|++||++|.+.++|+||||+|++.     ++.|+||++.++.|+||+|...+++++              ..
T Consensus         1 ~Wyhg~isr~~Ae~lL~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~g~~~~~   75 (109)
T 1ju5_A            1 SWYWGRLSRQEAVALLQGQRHGVFLVRDSSTS-----PGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSR   75 (109)
T ss_dssp             CCEETTCCHHHHHHHHTTCCTTEEEEEECSSS-----TTEEEEEEECSSCEEEEEEECCSSSSCCCCCCSSCCTTCCCCC
T ss_pred             CccccCCCHHHHHHHhcCCCCCEEEEEecCCC-----CCCEEEEEEECCeEEEEEEEECCCCcccccccccccccccccE
Confidence            59999999999999999888999999999744     589999999999999999987653110              16


Q ss_pred             EEeecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         155 YFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       155 ~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      |.++ ...|+||.+||+||+.++|.      .+.|..|++
T Consensus        76 ~~l~-~~~F~sl~~LV~~y~~~~l~------~~~L~~Pv~  108 (109)
T 1ju5_A           76 LRIG-DQEFDSLPALLEFYKIHYLD------TTTLIEPVS  108 (109)
T ss_dssp             EEET-TEEESSHHHHHHHHHHSCSS------SSCCCEESC
T ss_pred             EEeC-CcccCCHHHHHHHHhhCCCC------CeecCccCC
Confidence            7775 56799999999999999863      257888874

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.87  E-value=6.9e-22  Score=194.49  Aligned_cols=100  Identities=24%  Similarity=0.478  Sum_probs=89.3

Q ss_pred             cCCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec
Q psy3210          82 HENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ  159 (272)
Q Consensus        82 ~~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~  159 (272)
                      ...++.++||||.|+|++||++|..  +++|+||||+|+      .++.|+||++.++.|+||+|...++|   .|++.+
T Consensus       160 ~~~~~~~~Wy~g~isr~~ae~~L~~~~~~~G~FLvR~s~------~~g~y~lsv~~~~~v~h~~i~~~~~g---~~~~~~  230 (635)
T 4fl3_A          160 TTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARD------NNGSYALCLLHEGKVLHYRIDKDKTG---KLSIPE  230 (635)
T ss_dssp             TSCGGGSTTBCCSCCHHHHHHHHHSSSCCTTCEEEEESS------SSSCEEEEEEETTEEEEEEEEECTTS---CEESTT
T ss_pred             ccccccCCceeccCCHHHHHHHHHcCCCCCceEEEEecC------CCCCEEEEEEECCEEEEEEEEECCCC---CEEeCC
Confidence            3577889999999999999999976  469999999993      35999999999999999999887776   899998


Q ss_pred             ccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         160 SRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       160 ~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      ...|+||.+||+||+.++     +++.+.|..||.+
T Consensus       231 ~~~F~sl~~Lv~~y~~~~-----~~l~~~L~~p~~~  261 (635)
T 4fl3_A          231 GKKFDTLWQLVEHYSYKA-----DGLLRVLTVPCQK  261 (635)
T ss_dssp             CCCBSSHHHHHHHHTTCC-----TTSSSCCCSBCCC
T ss_pred             CCccCCHHHHHHHhhhCC-----CCCccccCccCcC
Confidence            789999999999999998     7899999999854

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens}

Probab=99.87  E-value=6.4e-23  Score=160.31  Aligned_cols=95  Identities=23%  Similarity=0.255  Sum_probs=82.8

Q ss_pred             CCcccccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEee----CCeeeEEEEEEecCCCcceEEe
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKT----DEKVKHMKVYEKEMDGVPQYFL  157 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~----~~~v~H~~I~~~~~g~~~~~~i  157 (272)
                      +.++.++||||.|+|++||++|.. .++|+||||+|++.     ++.|+|||+.    ++.|+||+|.. ++|   .|++
T Consensus        16 r~~~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~~~~~v~H~~I~~-~~g---~~~i   86 (118)
T 2el8_A           16 RRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPSGDG-----ADGVSVTTRQMHNGTHVVRHYKVKR-EGP---KYVI   86 (118)
T ss_dssp             CCCSSSCTTCCCCCHHHHHHHHHHSSTTCSBEEEECCSS-----SSSEEEEECCCBTTBCCCEEECBCC-BTT---BCCB
T ss_pred             ccccCCCceecCCCHHHHHHHHhhCCCCcEEEEeeCCCC-----CCceEEEEEEecCCCCcEEEEEEEE-cCC---EEEE
Confidence            677889999999999999999964 58999999999744     5899999999    88999999988 444   7999


Q ss_pred             eccccc--chhhhhhhhhhccccccccccccccccc
Q psy3210         158 SQSRYF--RSIVELICCYERNSLIENFIGLNVRLQL  191 (272)
Q Consensus       158 ~~~~~F--~sL~eLV~~y~~~~L~~~~~~l~~~L~~  191 (272)
                      .+...|  +||.+||+||+.++     .+++++|.+
T Consensus        87 ~~~~~F~~~sL~eLV~~y~~~~-----~gl~~~L~~  117 (118)
T 2el8_A           87 DVEQPFSCTSLDAVVNYFVSHT-----KKALVPFLL  117 (118)
T ss_dssp             SSSSCCCCSSHHHHHHHHHHHS-----SSCCCBCCC
T ss_pred             eCCCeECCCCHHHHHHHHhhCC-----CCCeEeeec
Confidence            887789  99999999999998     577777653

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens}

Probab=99.87  E-value=9.8e-23  Score=164.05  Aligned_cols=94  Identities=22%  Similarity=0.334  Sum_probs=80.4

Q ss_pred             ecCc-cCcCCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcce
Q psy3210          76 AKSW-ADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQ  154 (272)
Q Consensus        76 P~~~-~~~~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~  154 (272)
                      |.++ +....++.++||||.|+|++||++|.+.++|+||||+|++.     ++.|+||++.++.|+||+|... +|   .
T Consensus        11 ~~~~v~~~~~l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~-----~~~~~LSv~~~~~v~H~~I~~~-~g---~   81 (141)
T 2vif_A           11 VTSLTEELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDD-----RYLLSLSFRSHGKTLHTRIEHS-NG---R   81 (141)
T ss_dssp             ---HHHHHHHHHHHTCBCCSCCHHHHHHHTTTSCTTCEEEEECSST-----TCSEEEEEEETTEEEEEEEEEE-TT---E
T ss_pred             hhhhhcchhhhccCCCcccCCCHHHHHHHhcCCCCceEEEEecCCC-----CCCEEEEEEECCEEEEEEEEEE-CC---E
Confidence            3444 33467888999999999999999998888999999999744     5899999999999999999987 44   7


Q ss_pred             EEee---cccccchhhhhhhhhhcccc
Q psy3210         155 YFLS---QSRYFRSIVELICCYERNSL  178 (272)
Q Consensus       155 ~~i~---~~~~F~sL~eLV~~y~~~~L  178 (272)
                      |++.   ....|+||.|||+||+.+++
T Consensus        82 ~~l~~~~~~~~F~sl~eLI~~y~~~~~  108 (141)
T 2vif_A           82 FSFYEQPDVEGHTSIVDLIEHSIGDSE  108 (141)
T ss_dssp             EEETTCCSCCCBSSHHHHHHHHHHHHH
T ss_pred             EEEeecCCCCccCCHHHHHHHHhhCCC
Confidence            9998   57789999999999999885

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus}

Probab=99.87  E-value=1.8e-22  Score=162.48  Aligned_cols=109  Identities=26%  Similarity=0.400  Sum_probs=86.6

Q ss_pred             cCCcccccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec-
Q psy3210          82 HENLSEYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ-  159 (272)
Q Consensus        82 ~~~l~~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~-  159 (272)
                      +..++.++||||.|+|++||++|.. ..+|+||||+|++.   +.++.|+|||+.++.|+||+|...++|  ..|.+.+ 
T Consensus        17 ~~~l~~~~WyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~---~~~g~y~LSv~~~~~v~H~~I~~~~~g--~~~~l~~~   91 (141)
T 2eo6_A           17 EAELLGKPWYAGACDRKSAEEALHRSNKDGSFLIRKSSGH---DSKQPYTLVAFFNKRVYNIPVRFIEAT--KQYALGKK   91 (141)
T ss_dssp             HHTTTTCSSEEESCCHHHHHHHHHHHCCTTCBCEEECSTT---CSSCSEEEEEEETTEEEEEEECEETTT--TEECSSSC
T ss_pred             ccccCCCCeEecCCCHHHHHHHhhccCCCceEEEEECCCC---CCCCCEEEEEEECCEEEEEEEEEeCCC--CEEEEccc
Confidence            4678899999999999999999964 67999999999741   146999999999999999999876554  1477763 


Q ss_pred             ---ccccchhhhhhhhhhcccccccc----cccccccccccee
Q psy3210         160 ---SRYFRSIVELICCYERNSLIENF----IGLNVRLQLPFRQ  195 (272)
Q Consensus       160 ---~~~F~sL~eLV~~y~~~~L~~~~----~~l~~~L~~P~~~  195 (272)
                         ...|+||.|||+||+.+++....    ....+.|.+|+..
T Consensus        92 ~~~~~~F~sl~eLV~~y~~~~~~l~~~~~~~~~~~~L~~Pv~~  134 (141)
T 2eo6_A           92 KNGEEYFGSVVEIVNSHQHNPLVLIDSQNNTKDSTRLKYAVKV  134 (141)
T ss_dssp             CTTCCCBSSHHHHHHHHHHSCCCCCCSSSCCCCCCCCCCBCCC
T ss_pred             cCCCCccCCHHHHHHHHhhCCccceecccCCCCceEeCcCccc
Confidence               46899999999999999864311    1125778888853

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus}

Probab=99.86  E-value=2.5e-22  Score=165.35  Aligned_cols=100  Identities=20%  Similarity=0.309  Sum_probs=88.3

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc--
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS--  160 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~--  160 (272)
                      ..++.++||||.|+|++||++|...++|+||||+|++.     ++.|+|||+.++.|+||+|... +|   .|++.+.  
T Consensus        18 ~~L~~~~WyhG~IsR~eAe~lL~~~~~GtFLVR~S~s~-----~g~y~LSvr~~~~v~H~rI~~~-~g---~f~l~~~~~   88 (164)
T 2bbu_A           18 RKLQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQ-----RHFFTLSVKTQSGTKNLRIQCE-GG---SFSLQSDPR   88 (164)
T ss_dssp             HHHHHTSCCCTTSCHHHHHHHHHHSSTTCCEEEECSTT-----SCCEEEEECCTTCCEEEECEEE-TT---EEESSSCCC
T ss_pred             hhhccCCccCCCCCHHHHHHHhcCCCCCCEEEEECCCC-----CCCEEEEEEECCceEEEEEEeC-CC---eEEEecCcc
Confidence            56788999999999999999998888999999999743     5899999999999999999974 44   7999875  


Q ss_pred             -----cccchhhhhhhhhhccccccccccccccccccce
Q psy3210         161 -----RYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       161 -----~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                           ..|+||.+||+||+.+++.   .++++.|+.|.+
T Consensus        89 ~~~~~~~F~SL~eLV~~Y~~~~~~---~~~~~~l~ep~~  124 (164)
T 2bbu_A           89 STQPVPRFDCVLKLVHHYMPPPGT---PSFSLPPTEPSS  124 (164)
T ss_dssp             CCSSCTTCCHHHHHHHHHSCCCSC---SCCSSSCSSCCS
T ss_pred             cccCCCccCCHHHHHHHHhhCCCC---CCccccccCCCc
Confidence                 6899999999999999975   567888888875

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.85  E-value=9.7e-22  Score=162.88  Aligned_cols=104  Identities=21%  Similarity=0.355  Sum_probs=85.9

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc--
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS--  160 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~--  160 (272)
                      ..++.++||||.|+|++||++|.+.++|+||||+|++.     ++.|+||++.++.|+||+|... +|   .|++.+.  
T Consensus        12 ~~l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~-----~~~~~LSv~~~~~v~H~rI~~~-~g---~~~l~~~~~   82 (169)
T 2c9w_A           12 RELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHS-----DYLLTISVKTSAGPTNLRIEYQ-DG---KFRLDSIIC   82 (169)
T ss_dssp             HHHHHTSCBCTTCCHHHHHHHHTTSCTTCEEEEECCST-----TCSEEEEEEETTEEEEEEEEEE-TT---EEEECTTTT
T ss_pred             HhcccCCccccCCCHHHHHHHcCCCCCcEEEEecCCCC-----CCeEEEEEEECCeeEEEEEEEe-CC---EEEEccccC
Confidence            46788999999999999999999888999999999743     6899999999999999999986 44   7999884  


Q ss_pred             -----cccchhhhhhhhhhccccccc-------ccccccccccccee
Q psy3210         161 -----RYFRSIVELICCYERNSLIEN-------FIGLNVRLQLPFRQ  195 (272)
Q Consensus       161 -----~~F~sL~eLV~~y~~~~L~~~-------~~~l~~~L~~P~~~  195 (272)
                           ..|+||.+||+||+.+++...       ..++...|..|+.+
T Consensus        83 ~~~~~~~F~sl~eLI~~y~~~~~~~~~~~~~~~~~~~~~~L~~P~~~  129 (169)
T 2c9w_A           83 VKSKLKQFDSVVHLIDYYVQMCKDKRTGPEAPRNGTVHLYLTKPLYT  129 (169)
T ss_dssp             TGGGCCCBSCHHHHHHHHHHHTC--------------CCCCCCBCCS
T ss_pred             ccccCCCCCCHHHHHHHHHhCcCCCcccccCCCCcCccceecCcccc
Confidence                 689999999999999886521       13466788888853

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus}

Probab=99.85  E-value=6.6e-22  Score=161.12  Aligned_cols=87  Identities=23%  Similarity=0.389  Sum_probs=77.8

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc--
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS--  160 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~--  160 (272)
                      ..++.++||||.|+|++||++|...++|+||||+|++.     ++.|+||++.++.|+||+|.. ++|   .|+|.+.  
T Consensus        29 ~~l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~rI~~-~~g---~f~l~~~~~   99 (152)
T 2hmh_A           29 RKLQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQ-----RHFFTLSVKTQSGTKNLRIQX-EGG---SFSLQSDPR   99 (152)
T ss_dssp             HHHHHTSSEETTCCHHHHHHHHHTSCTTEEEEEECCST-----TCSEEEEEEETTEEEEEEEEC-GGG---CBEECBCTT
T ss_pred             hhhccCCCcCCCCCHHHHHHHhcCCCCCcEEEEeCCCC-----CCcEEEEEEcCCceEEEEEEe-cCC---EEEEecccc
Confidence            56788999999999999999998888999999999744     589999999999999999998 444   7888875  


Q ss_pred             -----cccchhhhhhhhhhcccc
Q psy3210         161 -----RYFRSIVELICCYERNSL  178 (272)
Q Consensus       161 -----~~F~sL~eLV~~y~~~~L  178 (272)
                           ..|+||.+||+||+.++.
T Consensus       100 ~~~~~~~F~SL~eLV~~Y~~~~~  122 (152)
T 2hmh_A          100 STQPVPRFDXVLKLVHHYMPPQA  122 (152)
T ss_dssp             CSSCCCCBSSHHHHHHHTCCCCC
T ss_pred             cccccCccCCHHHHHHHHhhCcc
Confidence                 789999999999999874

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=99.85  E-value=1.1e-21  Score=164.63  Aligned_cols=111  Identities=19%  Similarity=0.265  Sum_probs=90.0

Q ss_pred             ceeecCccCcCCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCc
Q psy3210          73 EWTAKSWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGV  152 (272)
Q Consensus        73 g~~P~~~~~~~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~  152 (272)
                      ++++...++..+++.++||||.|+|++||++|.+.++|+||||+|++.     .+.|+||++.++.|+||+|...+ |  
T Consensus        19 ~~~~~~v~~~~~l~~~~WYhG~isR~eAE~lL~~~~dGtFLVR~S~~~-----~~~lsLSvr~~~~v~H~rI~~~~-g--   90 (187)
T 2izv_A           19 YFQSMLVPDLLQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQE-----DYLFSVSFRRYSRSLHARIEQWN-H--   90 (187)
T ss_dssp             SCEEEECTTHHHHHHCTTEEEECCHHHHHHHHTTCCTTEEEEEECSST-----TCSEEEEEEETTEEEEEECEEET-T--
T ss_pred             ccccccccchhhcccCCccccCCCHHHHHHHhcCCCCCcEEEEECCCC-----CceEEEEEeeCCeEEEEEEEECC-C--
Confidence            344444455567889999999999999999998888999999999743     57899999999999999999874 4  


Q ss_pred             ceEEeecc----cccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         153 PQYFLSQS----RYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       153 ~~~~i~~~----~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                       .|++.+.    ..|+||.+||+||+.++...   .....|..|+.+
T Consensus        91 -~f~l~~~~~~~~~F~SL~eLV~hY~~~~~~~---~~~~~L~~Pv~r  133 (187)
T 2izv_A           91 -NFSFDAHDPCVFHSPDITGLLEHYKDPSACM---FFEPLLSTPLIR  133 (187)
T ss_dssp             -EEESCTTCTTSCCBSSHHHHHHHTCCGGGCC---TTSCCCCEECCC
T ss_pred             -EEEEeccCCCccccCCHHHHHHHHHhccccc---cccccccccccc
Confidence             7888864    27999999999999998532   124678888754

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.83  E-value=1e-20  Score=166.51  Aligned_cols=99  Identities=23%  Similarity=0.471  Sum_probs=88.9

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccC--CCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLERE--ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS  160 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~--~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~  160 (272)
                      ..++.++||||.|+|++||++|...  ++|+||||+| +.     ++.|+||++.++.|+||+|....+|   .|++.+.
T Consensus       153 ~~~~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S-~~-----~g~~~LSv~~~~~v~H~~I~~~~~g---~~~l~~~  223 (254)
T 1a81_A          153 TAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRAR-DN-----NGSYALCLLHEGKVLHYRIDKDKTG---KLSIPEG  223 (254)
T ss_dssp             TSGGGSTTEEEECCHHHHHHHHHSSCCCTTCEEEEEC-SS-----SSCEEEEEEETTEEEEEEEEECTTS---CEECTTS
T ss_pred             cccccCCccccCCCHHHHHHHHHhcCCCCceEEEEec-CC-----CCCEEEEEEECCEEEEEEEEEcCCC---CEEecCC
Confidence            5778899999999999999999753  8999999999 44     5999999999999999999987666   7999877


Q ss_pred             cccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         161 RYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      ..|+||.+||+||+.++     +++.+.|..|+.+
T Consensus       224 ~~F~sl~~LV~~y~~~~-----~~l~~~L~~p~~r  253 (254)
T 1a81_A          224 KKFDTLWQLVEHYSYKA-----DGLLRVLTVPCQK  253 (254)
T ss_dssp             CCBSCHHHHHHHHTTCC-----TTSSSCCCCBCCC
T ss_pred             cccCCHHHHHHHHHHCC-----CCCCeecCCcCCC
Confidence            88999999999999998     6889999999864

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.83  E-value=1e-20  Score=166.41  Aligned_cols=98  Identities=27%  Similarity=0.379  Sum_probs=86.7

Q ss_pred             cccccEeeeeCCHHHHHHhcc--cCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          85 LSEYLWFVGEMGREKATSLLE--READGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~--~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      .+.++||||.|+|++||++|.  ..++|+||||+|++.     ++.|+||++.++.|+||+|...++|   .|++.+...
T Consensus         3 ~~~~~Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~g---~~~l~~~~~   74 (254)
T 2oq1_A            3 AAHLPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRS-----LGGYVLSLVHDVRFHHFPIERQLNG---TYAIAGGKA   74 (254)
T ss_dssp             TTTCTTBCBSCCHHHHHHHHHHTTCCTTCEEEEECSSS-----TTCEEEEEEETTEEEEEEEEECTTS---CEEETTSCC
T ss_pred             cccCCccCCCCCHHHHHHHHhccCCCCcEEEEEeCCCC-----CCCEEEEEEECCeEEEEEEEEeCCC---CEEeCCCCc
Confidence            466899999999999999994  468999999999744     5899999999999999999986665   799987788


Q ss_pred             cchhhhhhhhhhcccccccccccccccccccee
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      |+||.+||+||+.++     +++.+.|..|+.+
T Consensus        75 F~sl~~LV~~y~~~~-----~~l~~~L~~p~~~  102 (254)
T 2oq1_A           75 HCGPAELCEFYSRDP-----DGLPCNLRKPCNR  102 (254)
T ss_dssp             BSSHHHHHHHHHHCC-----TTSSSCCCSBCCC
T ss_pred             cCCHHHHHHHHHhCC-----CCcccccccccCC
Confidence            999999999999988     6888999999853

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=99.83  E-value=7.1e-21  Score=167.46  Aligned_cols=98  Identities=24%  Similarity=0.385  Sum_probs=88.1

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccC--CCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLERE--ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS  160 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~--~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~  160 (272)
                      ..++.++||||.|+|++||++|...  ++|+||||+| +.     ++.|+||++.++.|+||+|....+|   .|++.+.
T Consensus       154 ~~l~~~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S-~~-----~g~~~LSv~~~~~v~H~~I~~~~~g---~~~~~~~  224 (254)
T 2oq1_A          154 TAHERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPR-KE-----QGTYALSLIYGKTVYHYLISQDKAG---KYCIPEG  224 (254)
T ss_dssp             HGGGGSTTBCSSCCHHHHHHHHHSSCCCTTEEEEEEC-SS-----TTEEEEEEEETTEEEEEEEEECTTS---CEESTTS
T ss_pred             cccCCCcccccCCCHHHHHHHHHhcCCCCceEEEEec-CC-----CCCEEEEEEECCeEEEEEEEEcCCC---CEEECCC
Confidence            4677889999999999999999864  8999999999 44     5999999999999999999987666   7999877


Q ss_pred             cccchhhhhhhhhhccccccccccccccccccce
Q psy3210         161 RYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      ..|+||.+||+||+.++     +++.+.|..||.
T Consensus       225 ~~F~sl~~LV~~y~~~~-----~~l~~~L~~p~~  253 (254)
T 2oq1_A          225 TKFDTLWQLVEYLKLKA-----DGLIYCLKEACP  253 (254)
T ss_dssp             CCBSSHHHHHHHHHHCC-----TTSSSCCCSBCC
T ss_pred             ceECCHHHHHHHHHhCC-----CCCCeeCCccCc
Confidence            88999999999999998     689999999985

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.83  E-value=5.4e-21  Score=176.00  Aligned_cols=105  Identities=30%  Similarity=0.513  Sum_probs=93.8

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      .+++.++||||.|+|++||.+|...++|+||||+|++.    .++.|+|||+.++.|+||+|...+ |   .|++.+...
T Consensus         5 ~sL~~~~WYhG~IsR~eAE~lL~~~~dG~FLVR~S~s~----~~g~y~LSvr~~~~v~H~rI~~~~-g---~y~l~~~~~   76 (373)
T 3hhm_B            5 MSLQNAEWYWGDISREEVNEKLRDTADGTFLVRDASTK----MHGDYTLTLRKGGNNKLIKIFHRD-G---KYGFSDPLT   76 (373)
T ss_dssp             CGGGGCTTEEESCCHHHHHHHTTTCCTTEEEEEECSCC------CCEEEEEEETTEEEEEEECCSS-S---CBCSSSSCC
T ss_pred             CCcccCCccCCCCCHHHHHHHhcCCCCCCEEEeccCCC----CCCCEEEEEEECCeeEEEEEEecC-C---eEEeCCCCC
Confidence            67889999999999999999999889999999999642    159999999999999999999754 3   699988788


Q ss_pred             cchhhhhhhhhhcccccccccccccccccccee
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      |+||.+||+||+.+++....+++++.|..|+.+
T Consensus        77 F~SL~eLV~~Y~~~~l~~~~~gl~~~L~~Pv~r  109 (373)
T 3hhm_B           77 FSSVVELINHYRNESLAQYNPKLDVKLLYPVSK  109 (373)
T ss_dssp             BSSSHHHHHHHHHSCGGGSCTTCCCCCCEECCS
T ss_pred             cCCHHHHHHHHhhCCccccCCCCCcccCCCCCC
Confidence            999999999999999988888999999999964

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.83  E-value=8.7e-21  Score=166.12  Aligned_cols=101  Identities=32%  Similarity=0.549  Sum_probs=82.9

Q ss_pred             ccccEeeeeC-----CHHHHHHhcc------cCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcce
Q psy3210          86 SEYLWFVGEM-----GREKATSLLE------READGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQ  154 (272)
Q Consensus        86 ~~~~Wf~g~i-----sR~~Ae~lL~------~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~  154 (272)
                      .+++||||.|     +|++||++|+      ..++|+||||+|++.     +|.|+|||+.+++|+||+|...++++...
T Consensus         2 ~~e~WfhG~i~~~~~sR~~AE~lL~~~~~~~~~~dG~FLVR~S~s~-----~G~y~LSv~~~~~v~H~~I~~~~~~g~~~   76 (246)
T 4fbn_A            2 SNEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETF-----VGDYTLSFWRNGKVQHCRIHSRQDAGTPK   76 (246)
T ss_dssp             -CCTTBCCCCSCC-CHHHHHHHHHHHHHHHHTCCTTCEEEEECSSS-----TTCEEEEEEETTEEEEEEEEEECGGGCCE
T ss_pred             CCCCCcCCccccccCCHHHHHHHHHHhhhccCCCCCEEEEEcCCCC-----CCCEEEEEEECCEEEEEEEEEECCCCcee
Confidence            5689999999     7999999996      468999999999754     69999999999999999998876543336


Q ss_pred             EEeecccccchhhhhhhhhhccccccccccccccccccc
Q psy3210         155 YFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF  193 (272)
Q Consensus       155 ~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~  193 (272)
                      |++.+...|+||.+||+||++++|..  +.+...+..|+
T Consensus        77 ~~~~~~~~F~sl~~LV~~y~~~~l~~--~~~~~~l~~p~  113 (246)
T 4fbn_A           77 FFLTDNLVFDSLYDLITHYQQVPLRC--NEFEMRLSEPV  113 (246)
T ss_dssp             EEEETTEEESSHHHHHHHHHHSCEEC--SSCEECCCCBC
T ss_pred             EEecCCcccCCHHHHHHhHhhccccc--ccccccccccc
Confidence            89998889999999999999998742  23445555555

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=99.83  E-value=5.4e-21  Score=171.19  Aligned_cols=103  Identities=29%  Similarity=0.518  Sum_probs=90.7

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEee-ccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLS-QSR  161 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~-~~~  161 (272)
                      ..+..++||||.|+|++||.+|...++|+||||+| +.     ++.|+|||+.++.|+||+|...++|    |++. ...
T Consensus       189 ~~l~~~~WyhG~IsR~eAE~lL~~~~~GtFLVR~S-s~-----~g~y~LSv~~~~~V~H~rI~~~~~g----~~~~~~~~  258 (302)
T 2y3a_B          189 PHHEERTWYVGKINRTQAEEMLSGKRDGTFLIRES-SQ-----RGCYACSVVVDGDTKHCVIYRTATG----FGFAEPYN  258 (302)
T ss_dssp             GGGSSTTTBCCSCCHHHHHHHHTTSCTTBEEBCCC-SS-----TTCEEEEEECSSSEEEEEEEEETTE----EESBTTBC
T ss_pred             ccccCCCccCCCCCHHHHHHHhcCCCCCcEEEEec-cC-----CCceEEEEEeCCeeEEEEEEECCCc----eEEeCCCC
Confidence            46778899999999999999998889999999999 44     5899999999999999999987764    5554 446


Q ss_pred             ccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         162 YFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       162 ~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      .|+||.+||+||+.++|....+++++.|..|+.+
T Consensus       259 ~F~SL~eLV~~Y~~~~L~~~~~gl~~~L~~Pv~~  292 (302)
T 2y3a_B          259 LYGSLKELVLHYQHASLVQHNDALTVTLAHPVRA  292 (302)
T ss_dssp             CCSSHHHHHHTTSSSCSTTTCSSCCCCCSBCSCC
T ss_pred             CCCCHHHHHHHHHhCCccccCCCCceeeCCccCC
Confidence            8999999999999999988778899999999965

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=99.82  E-value=1.4e-20  Score=165.55  Aligned_cols=98  Identities=28%  Similarity=0.374  Sum_probs=86.7

Q ss_pred             cccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          85 LSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      .+.++||||.|+|++||++|..  .++|+||||+|++.     ++.|+||++.++.|+||+|...++|   .|++.+...
T Consensus         2 ~~~~~Wy~g~isR~~Ae~lL~~~g~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~g---~~~l~~~~~   73 (254)
T 1a81_A            2 ANHLPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNY-----LGGFALSVAHGRKAHHYTIERELNG---TYAIAGGRT   73 (254)
T ss_dssp             TTSSTTBCSSCCHHHHHHHHHHTTCCTTEEEEEECSSS-----TTCEEEEEEETTEEEEEEEEECTTS---CEEETTSCC
T ss_pred             CccCccccCCCCHHHHHHHHhcCCCCCcEEEEEecCCC-----CCCEEEEEEECCeeEEEEEEEcCCC---CEEeCCCCC
Confidence            3567999999999999999953  58999999999744     5999999999999999999986665   799987788


Q ss_pred             cchhhhhhhhhhcccccccccccccccccccee
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      |+||.|||+||+.++     +++.+.|..|+.+
T Consensus        74 F~sl~eLv~~y~~~~-----~~l~~~L~~p~~~  101 (254)
T 1a81_A           74 HASPADLCHYHSQES-----DGLVCLLKKPFNR  101 (254)
T ss_dssp             BSSHHHHHHHHTTCC-----TTSSSCCCEECCC
T ss_pred             cCCHHHHHHHHHhCC-----CCceECCccccCC
Confidence            999999999999988     6888999999854

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=99.82  E-value=7.1e-21  Score=180.84  Aligned_cols=95  Identities=22%  Similarity=0.375  Sum_probs=83.6

Q ss_pred             CcceeecCccCcCCcccccEe-----eeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEE
Q psy3210          71 GNEWTAKSWADHENLSEYLWF-----VGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVY  145 (272)
Q Consensus        71 ~~g~~P~~~~~~~~l~~~~Wf-----~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~  145 (272)
                      .+|++|+|+..+.+++.++||     ||.|+|++||++|.. ++|+||||+|++.     +|.|+||++.++.|+||+|.
T Consensus        29 ~~g~~P~~~v~~~~~~~~~wy~~~w~hg~i~r~~ae~lL~~-~~G~FLvR~S~~~-----~g~~~Lsv~~~~~v~H~~I~  102 (463)
T 3cxl_A           29 QEAPHPRRITCTCEVENRPKYYGREFHGMISREAADQLLIV-AEGSYLIRESQRQ-----PGTYTLALRFGSQTRNFRLY  102 (463)
T ss_dssp             HHSCCCEECCCCCCCTTCCTTCCTTBCCSCCHHHHHHHHTT-STTEEEEEECSSS-----TTCEEEEEECSSSEEEEECE
T ss_pred             ccCCCCcCccCCccccCCCCccccccccCCCHHHHHHHHcC-CCCeEEEeccCCC-----CCCEEEEEEECCEEEEEEEe
Confidence            479999999877889999999     999999999999975 6899999999754     58999999999999999998


Q ss_pred             EecCCCcceEEeecccccchhhhhhh-----hhhccc
Q psy3210         146 EKEMDGVPQYFLSQSRYFRSIVELIC-----CYERNS  177 (272)
Q Consensus       146 ~~~~g~~~~~~i~~~~~F~sL~eLV~-----~y~~~~  177 (272)
                      .  +|   .|++++ ..|+||.|||+     ||....
T Consensus       103 ~--~g---~~~~~~-~~F~sl~~Lv~dGl~~~~~~~~  133 (463)
T 3cxl_A          103 Y--DG---KHFVGE-KRFESIHDLVTDGLITLYIETK  133 (463)
T ss_dssp             E--SS---SEESSS-CCBSCHHHHHHHHHHHHHHHHH
T ss_pred             c--CC---eEEECC-CccCCHHHHHHHHHHhhhccCC
Confidence            7  34   688876 57999999999     988764

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.80  E-value=5.5e-20  Score=169.34  Aligned_cols=157  Identities=21%  Similarity=0.258  Sum_probs=94.5

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      .+++.++||||.|+|++||++|.  .+|+||||+|++.     + .|+|||+.++.|+||+|...++    .|.+.. ..
T Consensus         8 ~~l~~~~wyhg~i~r~~a~~lL~--~~G~flvR~s~~~-----~-~~~lsv~~~~~~~h~~i~~~~~----~~~~~~-~~   74 (377)
T 3cbl_A            8 KPLHEQLWYHGAIPRAEVAELLV--HSGDFLVRESQGK-----Q-EYVLSVLWDGLPRHFIIQSLDN----LYRLEG-EG   74 (377)
T ss_dssp             SCGGGCTTBCTTCCHHHHHHHCC--STTEEEEEECC-------C-CEEEEC-----CCEEEC----C----CCCC-----
T ss_pred             cccccCCccCCCCCHHHHHHHHh--cCCCEEEEEeCCC-----C-cEEEEEEECCCccchhhccccc----eEEecc-ee
Confidence            67899999999999999999998  5799999999643     3 8999999999999999987644    566654 56


Q ss_pred             cchhhhhhhhhhccccccccccccccccccceeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCc--CCeEEEEeC--
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQ--KGWWKGKID--  238 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~--~gwW~G~~~--  238 (272)
                      |+|+.+||+||+.++-     .+..........          +...+...+...+. ++.+..|.+  ...|++...  
T Consensus        75 F~sl~~LI~~y~~~~~-----~l~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~lG~G~~g~V~~~~~~~~  138 (377)
T 3cbl_A           75 FPSIPLLIDHLLSTQQ-----PLTKKSGVVLHR----------AVPKDKWVLNHEDL-VLGEQIGRGNFGEVFSGRLRAD  138 (377)
T ss_dssp             CCSHHHHHHHHHHHTC-----CC-----CCCCE----------ECCCCTTBCCGGGE-EEEEEEEEETTEEEEEEEETTT
T ss_pred             ccchHHHHHHHhhccC-----CcccccCccccc----------CccccccEEchHHe-EEeeEeccCCCCeEEEEEEecC
Confidence            9999999999987652     221110000100          01112222222222 233333332  236888764  


Q ss_pred             Ce-ee--ee--------eccchhhhhhhccCCCCCccccee
Q psy3210         239 ER-VS--YF--------FQLYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       239 g~-~G--~f--------P~~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      ++ ..  .+        ...|.+|+++|+++.|||||++.-
T Consensus       139 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  179 (377)
T 3cbl_A          139 NTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG  179 (377)
T ss_dssp             CCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEE
T ss_pred             CeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            21 11  11        136889999999999999999853

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=99.79  E-value=2.1e-19  Score=157.34  Aligned_cols=97  Identities=29%  Similarity=0.561  Sum_probs=82.9

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccC-CCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeeccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLERE-ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSR  161 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~-~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~  161 (272)
                      ..++.++||||.|+|++||++|.+. .+|+||||+|+      .++.|+||++.++.|+||+|...+.    .|.+. ..
T Consensus       117 ~~~~~~~Wyhg~isr~~Ae~lL~~~~~~G~FLVR~s~------~~g~y~Lsv~~~~~v~H~~I~~~~~----~~~~~-~~  185 (246)
T 4fbn_A          117 NAHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRN------EPNSYAISFRAEGKIKHCRVQQEGQ----TVMLG-NS  185 (246)
T ss_dssp             CGGGGSTTEESSCCHHHHHHHHHTSCCTTEEEEEECS------STTEEEEEEEETTEEEEEEEEEETT----EEEET-TE
T ss_pred             CCcccCCeeecCccHHHHHHHHhhCCCCCeEEEEecC------CCCCEEEEEEeCCCeEEEEEEeCCC----EEEeC-CC
Confidence            5678899999999999999999764 58999999984      3589999999999999999987532    45554 55


Q ss_pred             ccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         162 YFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       162 ~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      .|+||.+||+||+++++     .+.+.|..|+.+
T Consensus       186 ~F~sL~~Lv~~y~~~p~-----~~~~~L~~Pv~~  214 (246)
T 4fbn_A          186 EFDSLVDLISYYEKHPL-----YRKMKLRYPINE  214 (246)
T ss_dssp             EESCHHHHHHHHHHSCS-----BTTBCCCEECSH
T ss_pred             ccCCHHHHHHHhCcCCC-----CCCcCCCCcCCC
Confidence            79999999999999995     677889999964

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.78  E-value=2.3e-19  Score=176.51  Aligned_cols=99  Identities=27%  Similarity=0.386  Sum_probs=88.8

Q ss_pred             CCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS  160 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~  160 (272)
                      .+++.++||||.|+|++||++|..  .++|+||||+|++     .++.|+||++.++.|+||+|...++|   .|++.+.
T Consensus         8 ~~l~~~~Wy~g~isr~~Ae~~L~~~~~~~G~FLvR~S~~-----~~g~y~lsv~~~~~v~h~~i~~~~~g---~~~~~~~   79 (635)
T 4fl3_A            8 DSANHLPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRN-----YLGGFALSVAHGRKAHHYTIERELNG---TYAIAGG   79 (635)
T ss_dssp             -CCTTCTTBCBSCCHHHHHHHHHHTTCCTTEEEEEECTT-----SSSCEEEEEEETTEEEEEEEEECTTS---CEESTTC
T ss_pred             chhhcCCccCCCCCHHHHHHHHhcCCCCCceEEEeeccc-----CCCCEEEEEEeCCEEEeEEEEEcCCC---CEEeCCC
Confidence            678889999999999999999966  5699999999974     46999999999999999999988666   7999888


Q ss_pred             cccchhhhhhhhhhccccccccccccccccccce
Q psy3210         161 RYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      ..|+||.+||+||++++     +++.+.|..|+.
T Consensus        80 ~~f~sl~~Lv~~y~~~~-----~~l~~~L~~p~~  108 (635)
T 4fl3_A           80 RTHASPADLCHYHSQES-----DGLVCLLKKPFN  108 (635)
T ss_dssp             CCBSSHHHHHHHHTTCC-----TTSSSCCCEECC
T ss_pred             CccCCHHHHHHHHhhCC-----CCCeeccCCcCC
Confidence            89999999999999998     788999998885

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.78  E-value=3.7e-19  Score=174.29  Aligned_cols=100  Identities=26%  Similarity=0.379  Sum_probs=87.9

Q ss_pred             CCcccccEeeeeCCHHHHHHhcc--cCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLE--READGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS  160 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~--~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~  160 (272)
                      +..+.++||||.|+|++||++|.  ..++|+||||+|++     .++.|+||++.++.|+||+|.+.++|   .|++.+.
T Consensus         3 d~~~~~~W~~g~i~r~~ae~~L~~~~~~~G~fLvR~s~~-----~~g~~~ls~~~~~~~~h~~i~~~~~g---~~~~~~~   74 (613)
T 2ozo_A            3 DPAAHLPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLR-----SLGGYVLSLVHDVRFHHFPIERQLNG---TYAIAGG   74 (613)
T ss_dssp             CTTSSCTTBCBSCCHHHHHHHHHTTTCCTTEEEEEECTT-----BTTCEEEEEEETTEEEEEEEEECTTS---CEEETTS
T ss_pred             CCCCCCCCcCccCCHHHHHHHHhccCCCCCeEEEEecCC-----CCCCEEEEEEECCeEEEEEEEECCCC---cEEECCC
Confidence            34566789999999999999994  46789999999974     46999999999999999999987666   7999888


Q ss_pred             cccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         161 RYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      ..|.||.+||+||+.++     +++++.|+.|+.+
T Consensus        75 ~~f~sl~~Lv~~y~~~~-----~~l~~~L~~p~~~  104 (613)
T 2ozo_A           75 KAHCGPAELCEFYSRDP-----DGLPCNLRKPCNR  104 (613)
T ss_dssp             CCBSSHHHHHHHHTSCC-----TTSSSCCCSBCCC
T ss_pred             CCcCCHHHHHHHHhhCC-----CCCCccCCccCCC
Confidence            88999999999999998     7889999988843

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.76  E-value=3.7e-19  Score=140.34  Aligned_cols=101  Identities=19%  Similarity=0.329  Sum_probs=81.3

Q ss_pred             cceeecCccC-cCCcccccEeeeeCCHHHHHHhcc-cC-CCceEEEEeCCCCCCCCCCCceEEEEeeC--CeeeEEEEEE
Q psy3210          72 NEWTAKSWAD-HENLSEYLWFVGEMGREKATSLLE-RE-ADGTYLLRIRPQGPTHPNETIYALSLKTD--EKVKHMKVYE  146 (272)
Q Consensus        72 ~g~~P~~~~~-~~~l~~~~Wf~g~isR~~Ae~lL~-~~-~~G~FLVR~s~~~~~~~~~~~y~LSv~~~--~~v~H~~I~~  146 (272)
                      .+++|+|+.. ..+++.++|||         .+|. .. .+|+||||+|+ .     ++.|+|||+.+  ++|+||+|..
T Consensus        13 ~~~iPsnyv~~~~~l~~~~Wyh---------~Ll~~g~~~dG~FLVR~S~-~-----~g~y~LSv~~~~~~~vkH~rI~~   77 (126)
T 2cr4_A           13 VPLPNSVFVNTTESCEVERLFK---------ATSPRGEPQDGLYCIRNSS-T-----KSGKVLVVWDETSNKVRNYRIFE   77 (126)
T ss_dssp             CSSCTTTBCSCCCHHHHHHHHH---------HHSTTSCCCTTCEEEEECS-S-----TTCEEEEEEETTTTEECCEECEE
T ss_pred             cCCCCHhhcCcccccccCCCHH---------HHhhCCCCCCCeEEEEecC-C-----CCCEEEEEEeCCCCCEEEEEEEE
Confidence            4678999844 55688899999         2332 23 35999999996 4     59999999999  9999999998


Q ss_pred             ecCCCcceEEeecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         147 KEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       147 ~~~g~~~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      .++    .|++.+...|+||.|||+||+++++...   ....|+.|+.
T Consensus        78 ~~~----~~~i~~~~~F~sL~eLV~hY~~~~l~~~---~~~~L~~P~~  118 (126)
T 2cr4_A           78 KDS----KFYLEGEVLFVSVGSMVEHYHTHVLPSH---QSLLLRHPYG  118 (126)
T ss_dssp             ETT----EEESSSSCEESSHHHHHHHHTTSCCSSS---SSCCCCSBSS
T ss_pred             CCC----eEEEcCCccCCCHHHHHHHHhhCCcCCC---CCEEeCCcCC
Confidence            765    6899888889999999999999998643   3456778874

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.69  E-value=2.5e-17  Score=158.64  Aligned_cols=102  Identities=24%  Similarity=0.346  Sum_probs=83.2

Q ss_pred             cccccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeeccccc
Q psy3210          85 LSEYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYF  163 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F  163 (272)
                      ++.++||||.|+|++||++|.. .++|+||||+|++.     ++.|+||++.++.|+||+|...+ +   .|.+.+...|
T Consensus         1 l~~~~Wyhg~i~r~~Ae~lL~~~~~~G~FLvR~S~~~-----~g~~~Lsv~~~~~v~H~~I~~~~-~---~~~l~~~~~F   71 (525)
T 2shp_A            1 MKSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSN-----PGDLTLSVRRNGAVTHIKIQNTG-D---YYDLYGGEKF   71 (525)
T ss_dssp             -CCSTTBCSSCCHHHHHHHHHHHCCTTEEEEEECSSS-----TTCEEEEEEETTEEEEEEEECSS-S---CEEETTSCEE
T ss_pred             CCCCCcccCCCCHHHHHHHHHhCCCCCcEEeeccCCC-----CCcEEEEEEECCEEEEEEEEecC-C---eEEECCCCeE
Confidence            3568999999999999999965 47899999999754     58999999999999999997643 3   6888877889


Q ss_pred             chhhhhhhhhhcccccc-cccccccccccccee
Q psy3210         164 RSIVELICCYERNSLIE-NFIGLNVRLQLPFRQ  195 (272)
Q Consensus       164 ~sL~eLV~~y~~~~L~~-~~~~l~~~L~~P~~~  195 (272)
                      +||.|||+||+.+++.- ...++...|..|+..
T Consensus        72 ~sl~eLv~~y~~~~~~l~~~~g~~i~L~~Pv~~  104 (525)
T 2shp_A           72 ATLAELVQYYMEHHGQLKEKNGDVIELKYPLNC  104 (525)
T ss_dssp             SSHHHHHHHHHTCTTCSBSSSSCBCCCCEECCC
T ss_pred             CCHHHHHHHHHhCCccccccccccccccccccc
Confidence            99999999999887432 223556777777743

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.69  E-value=3.4e-17  Score=159.95  Aligned_cols=98  Identities=21%  Similarity=0.406  Sum_probs=82.6

Q ss_pred             ccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccchh
Q psy3210          88 YLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSI  166 (272)
Q Consensus        88 ~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~sL  166 (272)
                      ++||||.|+|++||++|.. ..+|+||||+|++.     +|.|+||++.++.|+||+|...++    .|++.+...|+||
T Consensus         2 ~~Wy~g~isr~~Ae~lL~~~~~~G~FLvR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~----~~~~~~~~~F~sl   72 (595)
T 3ps5_A            2 VRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKN-----QGDFSLSVRVGDQVTHIRIQNSGD----FYDLYGGEKFATL   72 (595)
T ss_dssp             CSCCCSSCCHHHHHHHHHHHCCTTCEEEEECSSS-----TTSEEEEEEETTEEEEEEEEECSS----CEESSSSCCBSSH
T ss_pred             CCccCCCCCHHHHHHHHhhCCCCCEEEEeecCCC-----CCceEEEEEECCEEEEEEEEeCCC----cEEEecCccccch
Confidence            6899999999999999975 37899999999744     699999999999999999986543    6888888889999


Q ss_pred             hhhhhhhhccccccc-cccccccccccce
Q psy3210         167 VELICCYERNSLIEN-FIGLNVRLQLPFR  194 (272)
Q Consensus       167 ~eLV~~y~~~~L~~~-~~~l~~~L~~P~~  194 (272)
                      .|||+||+.+++... .+++...|..|+.
T Consensus        73 ~eLv~~y~~~~~~l~~~~g~~i~L~~P~~  101 (595)
T 3ps5_A           73 TELVEYYTQQQGVLQDRDGTIIHLKYPLN  101 (595)
T ss_dssp             HHHHHHHHTTSSCCBCSSCCBCCCCCBCC
T ss_pred             hhhhhhhccCccccccccccccccccccc
Confidence            999999999875422 3466777877774

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.68  E-value=2.7e-17  Score=158.68  Aligned_cols=99  Identities=22%  Similarity=0.435  Sum_probs=82.7

Q ss_pred             ccEeeeeCCHHHHHHhcccC-CCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccchh
Q psy3210          88 YLWFVGEMGREKATSLLERE-ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRSI  166 (272)
Q Consensus        88 ~~Wf~g~isR~~Ae~lL~~~-~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~sL  166 (272)
                      ++||||.|+|++||++|... ++|+||||+|++.     ++.|+||++.++.|+||+|... ++   .|.+.+...|+||
T Consensus         2 ~~Wyhg~i~r~~Ae~lL~~~~~~G~FLvR~S~~~-----~g~~~Lsv~~~~~v~H~~I~~~-~~---~~~~~~~~~F~sl   72 (532)
T 2b3o_A            2 VRWFHRDLSGLDAETLLKGRGVHGSFLARPSRKN-----QGDFSLSVRVGDQVTHIRIQNS-GD---FYDLYGGEKFATL   72 (532)
T ss_dssp             CTTBCSSCCHHHHHHHHHHHCCTTEEEEEECSSS-----SSEEEEEEEETTEEEEEEEECS-SS---CEEETTSCEESCH
T ss_pred             CCceeCCCCHHHHHHHHHhcCCCCCEEEecCCCC-----CCceEEEEEECCEEEEEEEEec-CC---EEEECCCcccCCH
Confidence            58999999999999999764 7899999999744     6999999999999999999863 33   7888777789999


Q ss_pred             hhhhhhhhccccc-ccccccccccccccee
Q psy3210         167 VELICCYERNSLI-ENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       167 ~eLV~~y~~~~L~-~~~~~l~~~L~~P~~~  195 (272)
                      .+||+||+.+++. ...+++.+.|..|+..
T Consensus        73 ~~Lv~~y~~~~~~l~~~~g~~~~L~~P~~~  102 (532)
T 2b3o_A           73 TELVEYYTQQQGVLQDRDGTIIHLKYPLNC  102 (532)
T ss_dssp             HHHHHHHHTTCSCBCCSSSCCBCCCEECCC
T ss_pred             HHHHHHHHhcccccccccCchhhccccccc
Confidence            9999999988732 1225677888888753

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=99.68  E-value=3.3e-17  Score=160.02  Aligned_cols=102  Identities=25%  Similarity=0.424  Sum_probs=86.6

Q ss_pred             CCcccccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCC---------eeeEEEEEEecCCCc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDE---------KVKHMKVYEKEMDGV  152 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~---------~v~H~~I~~~~~g~~  152 (272)
                      .+...++||||.|+|++||++|.. ..+|+||||+|++.     +|.|+||++.++         .|+||+|...+ +  
T Consensus       103 ~~p~~~~Wy~g~~~r~eAe~lL~~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~~~~~~~~~~v~H~~I~~~~-~--  174 (595)
T 3ps5_A          103 SDPTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQ-----PGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEG-G--  174 (595)
T ss_dssp             CCSCCSTTEEESCCHHHHHHHHHHHCCTTEEEEEECSSS-----TTCEEEEEEEEEESSSTTSCEEEEEEEEBCGG-G--
T ss_pred             ccccccccccccCCHHHHHHHHhccCCCceEEEEecCCC-----CCcEEEEEEECCccccccCCCceEEEEEEEeC-C--
Confidence            456678999999999999999954 56799999999744     699999999987         89999998743 3  


Q ss_pred             ceEEeecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         153 PQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       153 ~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                       .|++.+...|+||.+||+||+++++... .++.+.|..|+.
T Consensus       175 -~~~~~~~~~F~sl~~LV~~y~~~~l~~~-~g~~~~L~~p~~  214 (595)
T 3ps5_A          175 -RYTVGGLETFDSLTDLVEHFKKTGIEEA-SGAFVYLRQPYY  214 (595)
T ss_dssp             -CBBSSSSCCBSSHHHHHHHHHHSCBCCT-TSCCBCCCEECC
T ss_pred             -EEEEcCCcCCCCHHHHHHHHhcCCcccc-CCcEEEeecccc
Confidence             6999887889999999999999988765 467778888873

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=99.65  E-value=2.5e-16  Score=151.64  Aligned_cols=101  Identities=26%  Similarity=0.522  Sum_probs=86.5

Q ss_pred             CcccccEeeeeCCHHHHHHhcccC-CCceEEEEeCCCCCCCCCCCceEEEEeeCC----------eeeEEEEEEecCCCc
Q psy3210          84 NLSEYLWFVGEMGREKATSLLERE-ADGTYLLRIRPQGPTHPNETIYALSLKTDE----------KVKHMKVYEKEMDGV  152 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~~-~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~----------~v~H~~I~~~~~g~~  152 (272)
                      +.+.++||||.|+|++||++|... ++|+||||+|++.     +|.|+||++.++          .|+||+|...+ |  
T Consensus       106 dp~~~~w~~g~~~r~~Ae~lL~~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~~~~~~~~~~~v~H~~I~~~~-g--  177 (525)
T 2shp_A          106 DPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSH-----PGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQE-L--  177 (525)
T ss_dssp             CCTTCTTBCCSCCHHHHHHHHHHTCCTTEEEEEECSSS-----TTCEEEEEEECC-----CCCCCEEEEEEEEEET-T--
T ss_pred             ccccceeecccCCHHHHHHHHhccCCCceEEEEecCCC-----CCCEEEEEEECCccccccccccceEEEEEEecC-C--
Confidence            456689999999999999999765 7899999999754     599999999987          89999998874 4  


Q ss_pred             ceEEeecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         153 PQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       153 ~~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                       .|++.+...|.||.+||+||+.+++.+. .++...|..|+.
T Consensus       178 -~~~l~~~~~F~sL~eLV~~y~~~~l~~~-~g~~~~L~~P~~  217 (525)
T 2shp_A          178 -KYDVGGGERFDSLTDLVEHYKKNPMVET-LGTVLQLKQPLN  217 (525)
T ss_dssp             -EEESSSSCCBSSHHHHHHHHHHSCCBCT-TSCBCCCCEECC
T ss_pred             -eEEECCCceeCcHHHHHHhhhccCcccc-CCeEEEeecccc
Confidence             7999877789999999999999997653 466778888874

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=99.59  E-value=7.6e-16  Score=148.54  Aligned_cols=102  Identities=25%  Similarity=0.423  Sum_probs=85.1

Q ss_pred             CcccccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCC---------eeeEEEEEEecCCCcc
Q psy3210          84 NLSEYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDE---------KVKHMKVYEKEMDGVP  153 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~---------~v~H~~I~~~~~g~~~  153 (272)
                      +.+.++||||.|+|++||++|.. ..+|+||||+|++.     ++.|+||++.++         .|+||+|...+ |   
T Consensus       104 ~p~~~~w~~g~i~r~~Ae~lL~~~~~~G~FLVR~S~~~-----~g~y~Lsv~~~~~~~~~~~~~~v~h~~I~~~~-g---  174 (532)
T 2b3o_A          104 DPTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQ-----PGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEG-G---  174 (532)
T ss_dssp             CGGGCTTBCTTCCHHHHHHHHHHHCCTTEEEEEECSSS-----TTCEEEEEEEEEEC----CCEEEEEEEEBCCT-T---
T ss_pred             ccccccccccccchHHHHHHHhcCCCCceEEEecCCCC-----CCceEEEEEecCccccccCCCceEEEEEEEcC-C---
Confidence            45678999999999999999964 57899999999754     589999999877         89999998863 3   


Q ss_pred             eEEeecccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         154 QYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       154 ~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      .|+++....|.||.+||+||+.+++... .++...|..|+.+
T Consensus       175 ~~~l~~~~~F~sl~eLV~~y~~~~l~~~-~g~~~~L~~P~~~  215 (532)
T 2b3o_A          175 RYTVGGLETFDSLTDLVEHFKKTGIEEA-SGAFVYLRQPYYA  215 (532)
T ss_dssp             SBBSSSSCCBSSHHHHHHHHHHHCEECS-SSCEECCCEECCC
T ss_pred             ceeeCCCcccCcHHHHHhhccccCcccc-CCeeEeccccccc
Confidence            6888877789999999999999886433 4677788888753

>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}

Probab=99.58  E-value=1.1e-15  Score=104.70  Aligned_cols=55  Identities=22%  Similarity=0.411  Sum_probs=48.9

Q ss_pred             eeeeeeccCCCCCCCC-CccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQ-LPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~E-Lsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.++..+| |+|++||+|.|+.+.+  .|||.|+. +|+.|+||+|||+.+
T Consensus         4 ~~~rAlydy~~~~~~e~Ls~~~Gd~i~v~~~~~--~~Ww~g~~~~G~~G~fP~nyVe~i   60 (60)
T 2lx7_A            4 ARCRTLYPFSGERHGQGLRFAAGELITLLQVPD--GGWWEGEKEDGLRGWFPASYVQLL   60 (60)
T ss_dssp             CEEEESCCCCSCCCSSCCCCCTTCEEEBSCCCT--TSCEEEECTTSCEEEECGGGEEEC
T ss_pred             CEEEECcccCCCCCCCCccCCCCCEEEEeEecC--CCeEEEEeCCCCEEEEcHHHEEEC
Confidence            4689999999998877 9999999999998776  68999997 589999999999863

>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A

Probab=99.58  E-value=1.8e-15  Score=105.44  Aligned_cols=55  Identities=24%  Similarity=0.405  Sum_probs=50.3

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNFR  253 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~~  253 (272)
                      .++|+|||.+.+.+||+|++||+|.|+++.+  .|||.|+.  +|+.|+||+|||+++.
T Consensus         8 ~~~Alydy~a~~~~ELs~~~Gd~i~v~~~~~--~gWw~g~~~~~g~~G~~P~nyVe~l~   64 (65)
T 2lj0_A            8 SYQALYSYIPQNDDELELRDGDIVDVMEKCD--DGWFVGTSRRTKQFGTFPGNYVKPLY   64 (65)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEECT--TSEEEEEETTTCCEEEEETTSEEECC
T ss_pred             EEEEceeECCCCcCCcCCCCCCEEEEeEeCC--CCEEEEEECCCCCEEEEehhHeEEEe
Confidence            5789999999999999999999999998877  68999987  4899999999999864

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}

Probab=99.53  E-value=1.4e-14  Score=99.11  Aligned_cols=58  Identities=14%  Similarity=0.425  Sum_probs=51.9

Q ss_pred             ceeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         193 FRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       193 ~~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .....++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+.+|+.|+||++||+++
T Consensus         3 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~l   60 (60)
T 2xmf_A            3 LGSPQCKALYAYDAQDTDELSFNANDIIDIIKEDP--SGWWTGRLRGKQGLFPNNYVTKI   60 (60)
T ss_dssp             SCSCEEEESSCBCCSSTTBCCBCTTCEEEEEEECT--TSEEEEEETTEEEEEEGGGEEEC
T ss_pred             CCCcEEEECccCCcCCcCCcCCCCCCEEEEEEecC--CCEEEEEECCEEEEEcHHHEEEC
Confidence            33456899999999999999999999999998876  68999999999999999999853

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}

Probab=99.52  E-value=7e-15  Score=102.45  Aligned_cols=56  Identities=21%  Similarity=0.548  Sum_probs=51.1

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      .++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+.+|+.|+||++||+++..
T Consensus         3 ~~~Alydy~~~~~~eLs~~~Gd~i~v~~~~~--~gWw~g~~~g~~G~fP~~yv~~~~~   58 (65)
T 2fei_A            3 QCKVLFEYIPQNEDELELKVGDIIDINEEVE--EGWWSGTLNNKLGLFPSNFVKELEL   58 (65)
T ss_dssp             EEECSSCCCCCSTTBCCCCTTCEEECCCCSS--SSEEEEESSSCEEEEETTTSCBCCC
T ss_pred             EEEECccCCcCCcCccCCCCCCEEEEEEecC--CCEEEEEECCcEEEecHHHEEEcCC
Confidence            5889999999999999999999999998765  6899999999999999999997643

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A

Probab=99.52  E-value=1.4e-14  Score=99.15  Aligned_cols=55  Identities=25%  Similarity=0.390  Sum_probs=50.9

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+++
T Consensus         5 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~W~~g~~~g~~G~~P~~yv~~l   59 (60)
T 1w70_A            5 MRAEALFDFTGNSKLELNFKAGDVIFLLSRIN--KDWLEGTVRGATGIFPLSFVKIL   59 (60)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEEECS--SSEEEEEETTEEEEEEGGGEEEC
T ss_pred             cEEEECccCCcCCCCCccCCCCCEEEEEEeCC--CCeEEEEECCCEEEechHHEEEC
Confidence            46899999999999999999999999998876  68999999999999999999865

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=99.52  E-value=8e-16  Score=141.58  Aligned_cols=78  Identities=32%  Similarity=0.462  Sum_probs=0.0

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      ..++.++||||.|+|.+||++|...++|+||||+| +.     ++.|+||++.++.|+||+|...++|   .|+++....
T Consensus       296 ~~~~~~~WyhG~isR~~AE~LL~~~~~G~FLVR~S-s~-----~g~y~LSv~~~~~v~H~~I~~~~~g---~~~~~~~~~  366 (373)
T 3hhm_B          296 PHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRES-SK-----QGCYACSVVVDGEVKHCVINKTATG---YGFAEPYNL  366 (373)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccCCCCcCCCCCHHHHHHHhccCCCCcEEEEec-CC-----CCCEEEEEEECCeEEEEEEEEcCCC---cEEeCCCCC
Confidence            46678899999999999999998888999999999 43     5999999999999999999987776   778887678


Q ss_pred             cchhhhh
Q psy3210         163 FRSIVEL  169 (272)
Q Consensus       163 F~sL~eL  169 (272)
                      |+||.+|
T Consensus       367 F~SL~eL  373 (373)
T 3hhm_B          367 YSSLKEL  373 (373)
T ss_dssp             -------
T ss_pred             CCChhhC
Confidence            9999986

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}

Probab=99.52  E-value=1.5e-14  Score=101.60  Aligned_cols=60  Identities=20%  Similarity=0.369  Sum_probs=52.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhhcc
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLLSS  257 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~mk~  257 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+.+|+.|+||++||+++....+
T Consensus         4 ~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~~~~~   63 (68)
T 2ew3_A            4 PCCRGLYDFEPENQGELGFKEGDIITLTNQID--ENWYEGMIHGESGFFPINYVEVIVPLEH   63 (68)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEEESS--SSEEEEEETTEEEEEEGGGEEESCC---
T ss_pred             CEEEEeeeECCCCCCccCCCCCCEEEEEEecC--CCEEEEEECCcEEEeeHHHEEEcCccCC
Confidence            35899999999999999999999999998876  6899999999999999999997654443

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A

Probab=99.51  E-value=2e-14  Score=99.55  Aligned_cols=58  Identities=22%  Similarity=0.509  Sum_probs=51.2

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+.+...+.|||.|+.+|+.|+||++||+++
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~l   63 (64)
T 2jte_A            6 KEYCRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGELNGKEGVFPDNFAVQI   63 (64)
T ss_dssp             SEEEEESSCBCCSSSSBCCBCTTCEEEEEESCSSSTTEEEEEETTEEEEEEGGGEEEC
T ss_pred             CEEEEECccCCccCCCccCCCCCCEEEEEECCCCCCCEEEEEECCeEEEEeHHHEEEC
Confidence            3468999999999999999999999999987521268999999999999999999865

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}

Probab=99.51  E-value=1.9e-14  Score=97.68  Aligned_cols=54  Identities=28%  Similarity=0.608  Sum_probs=50.2

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+++
T Consensus         3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~   56 (58)
T 2bz8_A            3 EAIVEFDYQAQHDDELTISVGEIITNIRKED--GGWWEGQINGRRGLFPDNFVREI   56 (58)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEECCT--TTEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEECcccCCCCcCEeeECCCCEEEEEEeCC--CCEEEEEECCeEEEEehHHeEEc
Confidence            4789999999999999999999999998765  68999999999999999999875

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A

Probab=99.51  E-value=2.3e-14  Score=97.22  Aligned_cols=54  Identities=28%  Similarity=0.557  Sum_probs=50.1

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+.+|+.|+||++||+++
T Consensus         3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~   56 (58)
T 1uti_A            3 WARALYDFEALEEDELGFRSGEVVEVLDSSN--PSWWTGRLHNKLGLFPANYVAPM   56 (58)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEECccCCCCCcCCCCCCCCCEEEEEEECC--CCEEEEEECCeEEEeeHHHeEEc
Confidence            5789999999999999999999999998765  68999999999999999999865

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.51  E-value=2.4e-14  Score=98.54  Aligned_cols=56  Identities=23%  Similarity=0.423  Sum_probs=51.3

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+++
T Consensus         5 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~   60 (62)
T 1k4u_S            5 GSQVEALFSYEATQPEDLEFQEGDIILVLSKVN--EEWLEGESKGKVGIFPKVFVEDS   60 (62)
T ss_dssp             CEEEECCSCBCCCSSSBCCBCSSCEEEEEEESS--SSCEEEECSSCEEEECGGGCCCS
T ss_pred             CeEEEECCCCCcCCCCCccCCCCCEEEEEEeCC--CCEEEEEECCcEEEEeHHHEEEC
Confidence            346899999999999999999999999998866  68999999999999999999875

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A

Probab=99.50  E-value=2.8e-14  Score=100.54  Aligned_cols=60  Identities=22%  Similarity=0.442  Sum_probs=52.1

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~m  255 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+...+.|||.|+.+|+.|+||++||+++...
T Consensus         3 ~~~~Alydy~a~~~~eLs~~~Gd~i~vl~~~~~~~gWw~g~~~g~~G~~P~~yV~~~~~~   62 (69)
T 2ydl_A            3 DYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLPPL   62 (69)
T ss_dssp             EEEEESSCBCCCSTTBCCBCTTCEEEEEESCCSSTTEEEEEETTEEEEEEGGGEEECCSC
T ss_pred             cEEEEcccCCCCCCCccccCCCCEEEEEEcCCCCCCEEEEEECCcEEEecHHHEEECCCC
Confidence            358999999999999999999999999987511268999999999999999999976533

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A

Probab=99.50  E-value=2.9e-14  Score=96.82  Aligned_cols=55  Identities=29%  Similarity=0.422  Sum_probs=50.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+.+|+.|+||++||+++
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~   57 (58)
T 1zx6_A            3 EYVEALYQFDPQQDGDLGLKPGDKVQLLEKLS--PEWYKGSCNGRTGIFPANYVKPA   57 (58)
T ss_dssp             CEEEECSCBCCCSTTBCCBCTTCEEEEEEECS--SSEEEEEETTEEEEEEGGGEEEC
T ss_pred             eEEEECceECCCCCCCccCCCCCEEEEEEecC--CCEEEEEECCcEEEeeHHHEEEc
Confidence            35889999999999999999999999998866  68999999999999999999864

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A

Probab=99.50  E-value=2.3e-14  Score=97.31  Aligned_cols=54  Identities=24%  Similarity=0.441  Sum_probs=49.7

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+..  |+.|+||++||+.+
T Consensus         2 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~~~g~~G~~P~~yv~~~   57 (58)
T 1jo8_A            2 WATAEYDYDAAEDNELTFVENDKIINIEFVD--DDWWLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEECCS--SSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             EEEECceECCCCCCCcccCCCCEEEEEEecC--CCcEEEEECCCCCEEEechHHeEEC
Confidence            4789999999999999999999999998766  689999998  99999999999864

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}

Probab=99.50  E-value=2.1e-14  Score=99.96  Aligned_cols=55  Identities=25%  Similarity=0.414  Sum_probs=50.6

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      .++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+.+|+.|+||++||+++.
T Consensus         3 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~fP~~yv~~~~   57 (65)
T 2nwm_A            3 AARLKFDFQAQSPKELTLQKGDIVYIHKEVD--KNWLEGEHHGRLGIFPANYVEVLP   57 (65)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEECCT--TTCEEEEETTEEEEECGGGEEECC
T ss_pred             EEEEeeeECCCCcCccCCcCCCEEEEEEecC--CCEEEEEECCcEEEEehhhEEEcC
Confidence            5889999999999999999999999998766  689999999999999999998654

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A

Probab=99.50  E-value=3e-14  Score=97.05  Aligned_cols=55  Identities=27%  Similarity=0.573  Sum_probs=50.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+.+|+.|+||++||+++
T Consensus         5 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~l   59 (59)
T 2g6f_X            5 SVVRAKFNFQQTNEDELSFSKGDVIHVTRVEE--GGWWEGTHNGRTGWFPSNYVREI   59 (59)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEEECT--TSEEEEEETTEEEEEEGGGEEEC
T ss_pred             cEEEECceeCCCCcCCcCCCCCCEEEEEEecC--CCEEEEEECCcEEEEeHHHEEEC
Confidence            36899999999999999999999999998766  68999999999999999999863

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}

Probab=99.50  E-value=2.9e-14  Score=99.76  Aligned_cols=54  Identities=20%  Similarity=0.190  Sum_probs=50.0

Q ss_pred             eeeeeccCCCC--CCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPT--EANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~--~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.+.  +.+||+|++||+|.|+.+.+  .|||.|+.+|+.|+||++||+++
T Consensus         8 ~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~--~gWw~g~~~g~~G~fP~~yv~~~   63 (67)
T 2eyx_A            8 YARVIQKRVPNAYDKTALALEVGELVKVTKINV--SGQWEGECNGKRGHFPFTHVRLL   63 (67)
T ss_dssp             BEEECCCBCCCTTCSSBCCBCSSEEEEEEEECT--TSEEEEEETTEEEEEEGGGBCCB
T ss_pred             EEEEeEEECCCCCCCCccccCCCCEEEEEEecC--CCEEEEEECCCEEEEehHhEEEc
Confidence            58999999998  88999999999999998865  68999999999999999999975

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A

Probab=99.50  E-value=2.9e-14  Score=96.71  Aligned_cols=55  Identities=29%  Similarity=0.660  Sum_probs=50.5

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+++
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~   57 (58)
T 1sem_A            3 KFVQALFDFNPQESGELAFKRGDVITLINKDD--PNWWEGQLNNRRGIFPSNYVCPY   57 (58)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEECSS--SSEEEEEETTEEEEEEGGGEEEC
T ss_pred             eEEEECcCCCCCCCCCcCCCCCCEEEEEEecC--CCEEEEEECCcEEEechHHeEEC
Confidence            35899999999999999999999999998865  68999999999999999999864

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A

Probab=99.50  E-value=3.5e-14  Score=96.17  Aligned_cols=54  Identities=24%  Similarity=0.559  Sum_probs=50.3

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||+|..+|+.|+||++||+++
T Consensus         3 ~a~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~W~~g~~~g~~G~~P~~yv~~~   56 (58)
T 4e6r_A            3 PAFVXFAYVAEREDELSLVXGSRVTVMEXCS--DGWWRGSYNGQIGWFPSNYVLEE   56 (58)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEEECT--TSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEECccCCCCCCCEeeEeCCCEEEEeEcCC--CCEEEEEECCcEEEEehHHEEEC
Confidence            5889999999999999999999999998876  68999999999999999999974

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A

Probab=99.50  E-value=3.3e-14  Score=97.14  Aligned_cols=56  Identities=30%  Similarity=0.602  Sum_probs=50.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGN  251 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE  251 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+...|||.|+.+|+.|+||++||++
T Consensus         4 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~   59 (60)
T 1oot_A            4 PKAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVEL   59 (60)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEECCSCTTSEEEEEETTEEEEEEGGGEEE
T ss_pred             cEEEECccCCcCCcCEeeEcCCCEEEEEEeCCCCCCeEEEEECCEEEEEeHHHEEE
Confidence            35899999999999999999999999998763226899999999999999999985

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A

Probab=99.49  E-value=3.5e-14  Score=98.49  Aligned_cols=56  Identities=20%  Similarity=0.402  Sum_probs=51.3

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||+|+.+|+.|+||++||+++
T Consensus         9 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~   64 (65)
T 3ulr_B            9 GITAIALYDYQAAGDDEISFDPDDIITNIEMID--DGWWRGVCKGRYGLFPANYVELR   64 (65)
T ss_dssp             CSCEEECSCBCCCSTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEEEC
T ss_pred             ceEEEEEeeECCCCcCEeeEecCCEEEEEEecC--CCEEEEEECCcEEEEehHHeEEC
Confidence            346899999999999999999999999998876  68999999999999999999875

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A

Probab=99.49  E-value=3.2e-14  Score=97.98  Aligned_cols=55  Identities=18%  Similarity=0.459  Sum_probs=50.3

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeee-eCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSK-EGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k-~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      .++|+|||.+.+.+||+|.+||+|.|+.+ .+  .|||.|+.+|+.|+||++||+++.
T Consensus         3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~   58 (62)
T 2j6f_A            3 DYIVEYDYDAVHDDELTIRVGEIIRNVKKLQE--EGWLEGELNGRRGMFPDNFVKEIK   58 (62)
T ss_dssp             CEEECSCBCCSSTTBCCBCTTCEEEEEEECSS--TTEEEEEETTEEEEEEGGGEEECC
T ss_pred             EEEECccCCcCCcCCcCCcCCCEEEEEEecCC--CCEEEEEECCcEEEechHHEEECC
Confidence            47899999999999999999999999987 44  689999999999999999998754

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A

Probab=99.49  E-value=3.6e-14  Score=99.51  Aligned_cols=56  Identities=20%  Similarity=0.341  Sum_probs=50.3

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCC-----eeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDE-----RVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g-----~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+..+     +.|+||++||+++
T Consensus         7 ~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~--~~Ww~g~~~~~g~~~~~G~fP~~yv~~~   67 (68)
T 1tg0_A            7 PFKVVAQFPYKSDYEDDLNFEKDQEIIVTSVED--AEWYFGEYQDSNGDVIEGIFPKSFVAVQ   67 (68)
T ss_dssp             SEEEEESSCBCCSCTTBCCBCTTCEEEEEEECS--SSEEEEEEECTTSCEEEEEEEGGGEEEC
T ss_pred             CEEEEECeeECcCCcCCCCCCCCCEEEEEEecC--CCeEEEEECCCCCCCEEEEEchHHEEEC
Confidence            346899999999999999999999999998766  6899999876     9999999999864

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A

Probab=99.49  E-value=4.2e-14  Score=95.91  Aligned_cols=54  Identities=28%  Similarity=0.541  Sum_probs=50.1

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.+...+||+|.+||+|.|+.+.+  .+||.|+.+|+.|+||++||+++
T Consensus         4 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~   57 (58)
T 2vwf_A            4 YVQALFDFDPQEDGELGFRRGDFIHVMDNSD--PNWWKGACHGQTGMFPRNYVTAV   57 (58)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEECceECCCCcCCcCCCCCCEEEEEEcCC--CCEEEEEECCcEEEEchHHeEEC
Confidence            5789999999999999999999999998765  68999999999999999999875

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A

Probab=99.49  E-value=3.6e-14  Score=99.25  Aligned_cols=55  Identities=25%  Similarity=0.284  Sum_probs=50.5

Q ss_pred             eeeeeccCCCC--CCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         197 IAVAEFDFCPT--EANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       197 ~~~alydf~~~--~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      .++|+|||.+.  +.+||+|++||+|.|+.+.+  .|||+|+.+|+.|+||++||+++.
T Consensus         3 ~~~al~dy~~~~~~~~eLsf~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~fP~~yv~~~~   59 (67)
T 2bzy_A            3 FAKAIQKRVPCAYDKTALALEVGDIVKVTRMNI--NGQWEGEVNGRKGLFPFTHVKIFD   59 (67)
T ss_dssp             EEEECSCBCSEEECTTBCCBCTTCEEEEEEECS--SSEEEEEETTEEEEEEGGGEEECC
T ss_pred             EEEEeeeECCCCCCCCccccCCCCEEEEEEecC--CCeEEEEeCCcEEEEehHHeEECC
Confidence            58999999998  89999999999999998866  689999999999999999999764

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=4.3e-14  Score=99.15  Aligned_cols=57  Identities=19%  Similarity=0.242  Sum_probs=52.0

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+...+||+|++||+|.|+.+.+  .|||+|+.+|+.|+||++||+++.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~   63 (68)
T 2dmo_A            7 GEAHRVLFGFVPETKEELQVMPGNIVFVLKKGN--DNWATVMFNGQKGLVPCNYLEPVS   63 (68)
T ss_dssp             SEEEEECSSCCCCSSSSCCCCTTCEEEECEECS--SSCEEEEETTEEEEECSTTEEECC
T ss_pred             CCEEEECcCCCcCCcCCCCCCCCCEEEEEEeCC--CCEEEEEeCCCEEEeehHHeEECC
Confidence            346899999999999999999999999998866  689999999999999999999764

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A

Probab=99.48  E-value=2.7e-14  Score=101.71  Aligned_cols=57  Identities=28%  Similarity=0.446  Sum_probs=51.1

Q ss_pred             eeeeeeccCCCC--CCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPT--EANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~--~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|||.+.  +.+||+|++||+|.|+.+.+  .|||+|+.+|+.|+||++||+++..
T Consensus        10 ~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~--~gWw~g~~~g~~G~fP~~yv~~~~~   68 (73)
T 2ebp_A           10 GRARVHTDFTPSPYDTDSLKLKKGDIIDIISKPP--MGTWMGLLNNKVGTFKFIYVDVLSS   68 (73)
T ss_dssp             EEEEECSCBCCCTTCCSBCCBCSSCEEEEEECCS--SSCEEEECSSCEEEECSTTEEECCC
T ss_pred             eEEEEeeccCCCCCCCCccCCCCCCEEEEEEeCC--CCeEEEEECCCEEEEeHHHEEECCC
Confidence            358999999975  89999999999999998865  6899999999999999999997643

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}

Probab=99.48  E-value=5.4e-14  Score=101.89  Aligned_cols=60  Identities=18%  Similarity=0.219  Sum_probs=52.9

Q ss_pred             eeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       194 ~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ....++|+|||.+.+.+||+|++||+|.|+.+.++ .|||+|+.+|+.|+||++||+++..
T Consensus         9 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~-~gWw~g~~~g~~G~fP~~yv~~~~~   68 (80)
T 2i0n_A            9 FAKYARALKDYNVSDTSLLPFKRNDIITITFKDQE-NKWFMGQLNGKEGSFPVDHVEILLS   68 (80)
T ss_dssp             CCCEEEESSCBCCCSSSSCCBCSSEEEEEEEESSS-SSEEEEEETTEEEEEEGGGEEEESS
T ss_pred             CCeEEEECCCCCcCCCCCcCCCCCCEEEEEEecCC-CCEEEEEECCcEEEechHHEEECCC
Confidence            44578999999999999999999999999988763 3499999999999999999997643

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}

Probab=99.48  E-value=6.3e-14  Score=95.11  Aligned_cols=53  Identities=21%  Similarity=0.458  Sum_probs=49.4

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGN  251 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE  251 (272)
                      .++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||++
T Consensus         5 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~   57 (58)
T 1zlm_A            5 VFRALYTFEPRTPDELYFEEGDIIYITDMSD--TNWWKGTSKGRTGLIPSNYVAE   57 (58)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEEE
T ss_pred             EEEECccCCCCCCCCccCCCCCEEEEEEeCC--CCEEEEEECCCEEEEehHHEEe
Confidence            5899999999999999999999999998855  6899999999999999999985

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*

Probab=99.47  E-value=4.4e-14  Score=97.19  Aligned_cols=55  Identities=18%  Similarity=0.239  Sum_probs=49.6

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE--eCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK--IDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~--~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .|||.|+  .+|+.|+||++||+++
T Consensus         4 ~~~~al~~y~~~~~~eLs~~~Gd~i~v~~~~~--~~W~~g~~~~~g~~G~fP~~yv~~~   60 (62)
T 2fpe_A            4 QTHRAIFRFVPRHEDELELEVDDPLLVELQAE--DYWYEAYNMRTGARGVFPAYYAIEV   60 (62)
T ss_dssp             CCEEECSCBCCSSTTBCCBCTTCEEEEEEECT--TSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CEEEECccCCccCcCcCcCCCCCEEEEEEecC--CCEEEEEECCCCCEEEechHHEEEC
Confidence            35899999999999999999999999997766  6899999  4699999999999875

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}

Probab=99.47  E-value=7.8e-14  Score=93.25  Aligned_cols=53  Identities=17%  Similarity=0.333  Sum_probs=48.3

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWG  250 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVe  250 (272)
                      .++|+|||.+...+||+|++||+|.|+.+.++ .|||.|+.+|+.|+||++||+
T Consensus         2 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~-~~W~~g~~~g~~G~~P~~yv~   54 (54)
T 2a28_A            2 AMEAIYAYEAQGDDEISIDPGDIITVIRGDDG-SGWTYGECDGLKGLFPTSYCK   54 (54)
T ss_dssp             EEEBCSCBCCCSTTBCCBCTTCEEEEEECCCS-SSEEEEEETTEEEEEEGGGBC
T ss_pred             EEEECccCCcCCCCCccCCCCCEEEEEEecCC-CCEEEEEECCeEEEeeHHHcC
Confidence            47899999999999999999999999987632 589999999999999999985

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}

Probab=99.47  E-value=4.4e-14  Score=99.30  Aligned_cols=60  Identities=18%  Similarity=0.349  Sum_probs=52.3

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCC-cCCeEEEEeCCeeeeeeccchhhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGE-QKGWWKGKIDERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge-~~gwW~G~~~g~~G~fP~~yVeE~~~m  255 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+..+ +.|||.|+.+|+.|+||++||+.+..+
T Consensus         4 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   64 (69)
T 1wyx_A            4 VLAKALYDNVAESPDELSFRKGDIMTVLEQDTQGLDGWWLCSLHGRQGIVPGNRLKILVGM   64 (69)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEETTGGGCTTEEEEEETTEEEEEEGGGEEEEEEE
T ss_pred             EEEEECccCCcCCCCccCCcCCCEEEEeECCCCCCCCcEEEEECCcEEEechhhEEECCCC
Confidence            358999999999999999999999999987621 168999999999999999999977544

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A

Probab=99.47  E-value=7e-14  Score=94.79  Aligned_cols=54  Identities=26%  Similarity=0.596  Sum_probs=49.9

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGN  251 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE  251 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||++
T Consensus         4 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~W~~g~~~g~~G~~P~~yv~~   57 (58)
T 2drm_A            4 IQVKALYDYDAQTGDELTFKEGDTIIVHQKDP--AGWWEGELNGKRGWVPANYVQD   57 (58)
T ss_dssp             EEEEESSCBCCCSTTBCCBCTTCEEEEEECCT--TSEEEEEETTEEEEEEGGGEEE
T ss_pred             cEEEECccCCCCCcCCcCCCCCCEEEEEEecC--CCEEEEEECCcEEEEeHHHEEE
Confidence            35899999999999999999999999998865  6899999999999999999985

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}

Probab=99.47  E-value=8e-14  Score=97.70  Aligned_cols=57  Identities=14%  Similarity=0.209  Sum_probs=51.8

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .+||.|+.+|+.|+||++||+++..
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (68)
T 2djq_A            8 PRAKALCNYRGKNPGDLKFNKGDVILLRRQLD--ENWYQGEINGVSGIFPASSVEVISG   64 (68)
T ss_dssp             CEEEECSCCCSCCTTCCCCCTTCEEEEEECCC--SSEEEEEETTEEEEEESSSEETTCS
T ss_pred             eEEEECCCCCCCCcCCccCCCCCEEEEEEecC--CCEEEEEECCcEEEeehHHEEEcCC
Confidence            46899999999999999999999999998765  6899999999999999999997653

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=5.4e-14  Score=100.63  Aligned_cols=56  Identities=20%  Similarity=0.404  Sum_probs=50.1

Q ss_pred             eeeeeeccCCCCC-------CCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTE-------ANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~-------~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+..       .+||+|++||+|.|+++..+ .|||.|+.+|+.|+||++||+++
T Consensus         8 ~~~~Alydy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~-~gWw~g~~~g~~G~fP~~yv~~~   70 (75)
T 2ege_A            8 KIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDD-QGFYYGELGGHRGLVPAHLLDHM   70 (75)
T ss_dssp             EEEEESSCBCTTTTCCCSSSCCBCCBCTTCEEEEESCCCT-TCEEEEESSSCEEEEETTTEEEC
T ss_pred             cEEEECCCCCCCccccCCCCCCcceECCCCEEEEeEccCC-CCEEEEEECCcEEEEChHHeEEc
Confidence            4689999999999       99999999999999974332 68999999999999999999975

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A

Probab=99.47  E-value=6.3e-14  Score=96.97  Aligned_cols=56  Identities=27%  Similarity=0.606  Sum_probs=51.3

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+++.
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~   62 (64)
T 2ak5_A            7 LVVRAKFNFQQTNEDELSFSKGDVIHVTRVEE--GGWWEGTHNGRTGWFPSNYVREIK   62 (64)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEECCT--TSEEEEEETTEEEEEEGGGEEECC
T ss_pred             EEEEEccccCCcCcCcccCCCCCEEEEeEecC--CCEEEEEECCCEEEEehHHeEEcC
Confidence            46899999999999999999999999998765  689999999999999999999764

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}

Probab=99.47  E-value=7.4e-14  Score=95.47  Aligned_cols=53  Identities=23%  Similarity=0.553  Sum_probs=49.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWG  250 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVe  250 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .|||+|+.+|+.|+||++||+
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~   59 (60)
T 2gnc_A            7 EFAIAKFDYVGRSARELSFKKGASLLLYHRAS--EDWWEGRHNGIDGLVPHQYIV   59 (60)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEEEEE--TTEEEEEETTEEEEEEGGGEE
T ss_pred             EEEEECCCCCcCCcCCcCCCCCCEEEEEEecC--CCEEEEEECCeEEEEeHhhEE
Confidence            46899999999999999999999999998866  589999999999999999996

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.46  E-value=6e-14  Score=98.41  Aligned_cols=56  Identities=29%  Similarity=0.654  Sum_probs=51.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .+||+|+.+|+.|+||++||+++.
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~   63 (68)
T 2dl4_A            8 NTYVALYKFVPQENEDLEMRPGDIITLLEDSN--EDWWKGKIQDRIGFFPANFVQRLS   63 (68)
T ss_dssp             CEEEESSCCCCSSTTBCCCCTTCEEEEEECCC--SSEEEEECSSCEEEEETTTEEECC
T ss_pred             CEEEEeeeECCCCcCCcCCCCCCEEEEEEeCC--CCEEEEEECCcEEEEehHHeEECC
Confidence            46899999999999999999999999998766  689999999999999999999764

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A

Probab=99.46  E-value=7e-14  Score=94.50  Aligned_cols=54  Identities=22%  Similarity=0.468  Sum_probs=48.7

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE-eCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~-~~g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+ .+|+.|+||++||+++
T Consensus         3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~~g~~G~~P~~yv~~~   57 (57)
T 1cka_A            3 YVRALFDFNGNDEEDLPFKKGDILRIRDKPE--EQWWNAEDSEGKRGMIPVPYVEKY   57 (57)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEECSS--SSEEEEECTTSCEEEEEGGGEEC-
T ss_pred             EEEECCcCCCCCCCCCCCCCCCEEEEEEecC--CCcEEEEeCCCCEEEEeHHHEEEC
Confidence            5789999999999999999999999998765  6899999 6799999999999863

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.46  E-value=4.3e-14  Score=100.54  Aligned_cols=59  Identities=31%  Similarity=0.656  Sum_probs=52.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+..++.|||.|+.+|+.|+||++||+++..
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   66 (73)
T 2dm1_A            8 GTAVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTYVEEEGI   66 (73)
T ss_dssp             SEEEESSCBCCCSTTBCCBCTTCEEECCBSSSSSSSCEEEEETTEEEEECSSSEEECCC
T ss_pred             CEEEECccCCcCCCCcCCCCCCCEEEEEEecCCCCCeEEEEECCeEEEeehHHEEEcCC
Confidence            46899999999999999999999999998764225899999999999999999997643

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}

Probab=99.46  E-value=1e-13  Score=97.43  Aligned_cols=59  Identities=24%  Similarity=0.470  Sum_probs=53.1

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhhhhhhc
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGNFRLLS  256 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE~~~mk  256 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+. +|+.|+||++||++++...
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~~g~~G~~P~~yv~~~~~~~   66 (69)
T 4esr_A            7 PTVVALYDYTANRSDELTIHRGDIIRVFFKDN--EDWWYGSIGKGQEGYFPANHVASETLYQ   66 (69)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEEECS--SSEEEEEEETTEEEEEEGGGEEEHHHHH
T ss_pred             CEEEECccCCCCCcCcCCCCCCCEEEEEEecC--CCeEEEEeCCCCEEEEchHHeEECcccC
Confidence            35899999999999999999999999998776  68999998 8999999999999876553

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A

Probab=99.46  E-value=7.4e-14  Score=96.72  Aligned_cols=57  Identities=19%  Similarity=0.510  Sum_probs=51.5

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+++.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~W~~g~~~g~~G~~P~~yv~~~~   63 (65)
T 3u23_A            7 KRQCKVLFEYIPQNEDELELKVGDIIDINEEVE--EGWWSGTLNNKLGLFPSNFVKELE   63 (65)
T ss_dssp             -CEEEECSCBCCSSTTBCCBCTTCEEEEEEEEE--TTEEEEEETTEEEEEEGGGEEECC
T ss_pred             CeEEEEeeeeCCCCcCCcCCCCCCEEEEEEecC--CCEEEEEECCCEEEeehHHEEECc
Confidence            346899999999999999999999999998866  689999999999999999999764

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}

Probab=99.46  E-value=2.8e-14  Score=103.25  Aligned_cols=58  Identities=24%  Similarity=0.332  Sum_probs=52.4

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+++..
T Consensus        18 ~~~~~Alydy~a~~~~eLsf~~Gd~I~Vl~~~~--~gWw~g~~~g~~G~fP~nyV~~~~~   75 (79)
T 1z9q_A           18 APRAEALFDFTGNSKLELNFKAGDVIFLLSRIN--KDWLEGTVRGATGIFPLSFVKILKD   75 (79)
T ss_dssp             CCCEEESSCCCCSSTTBCCCCTTCCBCCCEESS--SSEEEEEETTEEEEEEGGGEEESSC
T ss_pred             ceEEEEcCccCCCCCCcccccCCCEEEEeEecC--CCEEEEEECCeEEEecHHHEEECCC
Confidence            346899999999999999999999999998866  6899999999999999999997643

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...

Probab=99.46  E-value=9.3e-14  Score=95.35  Aligned_cols=56  Identities=20%  Similarity=0.503  Sum_probs=51.2

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+.+.+  .+||+|+.+|+.|+||++||+++
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~~~~~g~~G~~P~~yv~~~   61 (62)
T 3ngp_A            6 KELVLVLYDYQEKSPRELTVKKGDILTLLNSTN--KDWWKIEVNGRQGFVPAAYLKKL   61 (62)
T ss_dssp             CCEEEECSCBCCCSTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEEEC
T ss_pred             CEEEEECcCCCCCCCCCccCCCCCEEEEeEecC--CCeEEEEECCEEEEEEHHHEEEC
Confidence            346899999999999999999999999998776  68999999999999999999874

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=9.1e-14  Score=99.67  Aligned_cols=57  Identities=19%  Similarity=0.350  Sum_probs=51.2

Q ss_pred             eeeeeeccCCCCC-------CCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTE-------ANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~-------~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+..       .+||+|++||+|+|+.+.++ .|||.|+.+|+.|+||++||+++.
T Consensus         8 ~~~~Al~dy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~-~gWw~g~~~g~~G~~P~~yv~~~~   71 (76)
T 2csi_A            8 RRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDE-DGFYYGELNGQKGLVPSNFLEEVS   71 (76)
T ss_dssp             EEEECSSCCCTTTTSCSSSTTTSCCCCTTCEEEEESSCCS-SSEEEEEETTEEEEEEGGGCCBCC
T ss_pred             cEEEEcccCCCCCcccCCCCCCcccCCCCCEEEEeEecCC-CCeEEEEECCcEEEEehHHEEECC
Confidence            4689999999998       89999999999999988663 479999999999999999999753

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}

Probab=99.46  E-value=7.9e-14  Score=99.16  Aligned_cols=58  Identities=19%  Similarity=0.392  Sum_probs=52.7

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ...++|+|||.+.+.+||+|++||+|.|+++.+  .|||.|+.+|+.|+||++||+++..
T Consensus        13 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~W~~g~~~g~~G~~P~~yv~~~~~   70 (73)
T 3c0c_A           13 QPSCKALYDFEPENDGELGFREGDLITLTNQID--ENWYEGMLHGQSGFFPLSYVQVLVP   70 (73)
T ss_dssp             SCEEEESSCBCCSSTTBCCBCTTCEEEEEEECS--SSEEEEEETTEEEEEEGGGEEEEEC
T ss_pred             CeEEEECccCCCCCCCCccCcCCCEEEEEEecC--CCEEEEEECCCEEEeChHHEEECCC
Confidence            456899999999999999999999999998876  6899999999999999999997653

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D

Probab=99.46  E-value=7.9e-14  Score=95.19  Aligned_cols=56  Identities=25%  Similarity=0.534  Sum_probs=49.5

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+.++ .|||.|+.. |+.|+||++||+++
T Consensus         4 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~-~~W~~g~~~~g~~G~~P~~yv~~l   60 (60)
T 2x3w_D            4 VRVRALYDYDGQEQDELSFKAGDELTKLGEEDE-QGWCRGRLDSGQLGLYPANYVEAI   60 (60)
T ss_dssp             CEEEECSCBCCSSSSBCCBCTTCEEEECSCCCS-SSEEEEECSSCCEEEEEGGGEEC-
T ss_pred             CEEEECcccCccCCCcccCCCCCEEEEEEccCC-CCceEEEeCCCCEEEecHHHEEEC
Confidence            358999999999999999999999999987543 589999998 99999999999863

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1

Probab=99.46  E-value=1.1e-13  Score=95.26  Aligned_cols=54  Identities=26%  Similarity=0.476  Sum_probs=49.8

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGN  251 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE  251 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+..|+.|+||++||++
T Consensus         6 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~   59 (62)
T 1uj0_A            6 RRVRALYDFEAVEDNELTFKHGELITVLDDSD--ANWWQGENHRGTGLFPSNFVTT   59 (62)
T ss_dssp             EEEEESSCBCCCSTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEES
T ss_pred             eEEEECccCCCCCcCCcCCCCCCEEEEEEeCC--CCEEEEEECCCEEEechhHEEE
Confidence            35899999999999999999999999998765  6899999999999999999985

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.46  E-value=7.2e-14  Score=98.42  Aligned_cols=55  Identities=29%  Similarity=0.578  Sum_probs=49.1

Q ss_pred             eeeeeccCCCCCCC-CCccCCCcEEEEeeeeCC---cCCeEEEEe-CCeeeeeeccchhh
Q psy3210         197 IAVAEFDFCPTEAN-QLPLKQGCQVIVLSKEGE---QKGWWKGKI-DERVSYFFQLYWGN  251 (272)
Q Consensus       197 ~~~alydf~~~~~~-ELsl~~Gd~i~v~~k~ge---~~gwW~G~~-~g~~G~fP~~yVeE  251 (272)
                      .++|+|+|.+++.+ ||+|++||+|.|+.+.+.   ..|||+|+. +|+.|+||+|||+.
T Consensus         9 ~~~aly~y~a~~~~dELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~~~G~~G~~PsnyV~~   68 (69)
T 1nm7_A            9 FARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEI   68 (69)
T ss_dssp             CEEECSCCCCSSTTSCCCCCTTCEEEECCSSSSSCCSSSCEEEEETTTEEEEECGGGEEE
T ss_pred             EEEEEecccCCCCCCccCCCCCCEEEEEecCCCCCCCCCeeEEEeCCCCEEEecHHHEEE
Confidence            57899999999988 999999999999987652   258999999 79999999999985

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A

Probab=99.46  E-value=5.2e-14  Score=107.79  Aligned_cols=61  Identities=26%  Similarity=0.391  Sum_probs=52.5

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCC-cCCeEEEEeC--------Ceeeeeeccchhhhhhhc
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGE-QKGWWKGKID--------ERVSYFFQLYWGNFRLLS  256 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge-~~gwW~G~~~--------g~~G~fP~~yVeE~~~mk  256 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.++ +.+||.|+..        |+.|+||+|||++++.+.
T Consensus        23 ~~~~Alydy~a~~~~ELsf~~GDiI~Vl~k~~~~g~dWW~G~~~~~~~~~~~g~~G~fPsnYV~~~~~~~   92 (108)
T 1i1j_A           23 SMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLK   92 (108)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEEECS
T ss_pred             eEEEECCccCCCCCCccccCCCCEEEEEEecCCCCCCEEEEEECCccccCCCCCEEEEchhHEEEccccC
Confidence            358999999999999999999999999988422 1349999988        899999999999877554

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A

Probab=99.45  E-value=7.2e-14  Score=99.34  Aligned_cols=60  Identities=20%  Similarity=0.377  Sum_probs=53.5

Q ss_pred             eeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhh
Q psy3210         194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       194 ~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~m  255 (272)
                      ....++|+|||.+...+||+|++||+|.|+.+.+  .+||.|+.+|+.|+||++||+++..+
T Consensus         6 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~~~   65 (73)
T 2dbm_A            6 SGPCCRALYDFEPENEGELGFKEGDIITLTNQID--ENWYEGMLHGHSGFFPINYVEILVAL   65 (73)
T ss_dssp             CCCEEEESSCBCCCSTTCCCBCTTCEEECCBCSS--SSEEEEEETTEEEEEESSSEEESSCC
T ss_pred             CCCEEEEccccCCCCCCCccCCCCCEEEEEEecC--CCEEEEEECCCEEEechHHEEEccCC
Confidence            3456899999999999999999999999998766  68999999999999999999976543

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.45  E-value=4.6e-14  Score=100.17  Aligned_cols=57  Identities=16%  Similarity=0.250  Sum_probs=50.5

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+..+ .+||+|+.+|+.|+||++||+++.
T Consensus        11 ~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~-~~Ww~g~~~g~~G~~P~~yv~~~~   67 (72)
T 1ugv_A           11 RKAKALYACKAEHDSELSFTAGTVFDNVHPSQE-PGWLEGTLNGKTGLIPENYVEFLS   67 (72)
T ss_dssp             CCEEESSCBCCCSSSBCCBCTTCEEBSCCBCSS-TTEEEEESSSCEEEEEGGGEEECC
T ss_pred             cEEEEccccCCcCCCEeCCcCCCEEEEEEecCC-CCeEEEEECCcEEEecHHHEEECC
Confidence            468999999999999999999999999875332 689999999999999999999754

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1

Probab=99.45  E-value=8.5e-14  Score=96.86  Aligned_cols=55  Identities=22%  Similarity=0.443  Sum_probs=49.8

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE-eCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~-~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+++.+  .|||+|+ .+|+.|+||++||+++
T Consensus         4 ~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~--~~Ww~g~~~~g~~G~~P~~yv~~~   59 (65)
T 1b07_A            4 EYVRALFDFNGNDEEDLPFKKGDILRIRDKPE--EQWWNAEDSEGKRGMIPVPYVEKY   59 (65)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEECSS--SSEEEEECTTSCEEEEEGGGEEEC
T ss_pred             eEEEECCcCCCCCCCccCCcCCCEEEEEEecC--CCeEEEEECCCCEEEEChHHEeec
Confidence            35889999999999999999999999998766  6899999 6799999999999864

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A

Probab=99.45  E-value=8.3e-14  Score=96.76  Aligned_cols=55  Identities=11%  Similarity=0.161  Sum_probs=49.6

Q ss_pred             eeeeeeccCCC-CCCCCCccCCCcEEEEeeeeCCcCCeEEEE--eCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCP-TEANQLPLKQGCQVIVLSKEGEQKGWWKGK--IDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~-~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~--~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+ .+.+||+|++||+|.|+.+.+  .|||.|+  .+|+.|+||++||+++
T Consensus         6 ~~~~alydy~~~~~~~eLs~~~Gd~i~v~~~~~--~gW~~g~~~~~g~~G~~P~~yv~~~   63 (65)
T 2j05_A            6 RRVRAILPYTKVPDTDEISFLKGDMFIVHNELE--DGWMWVTNLRTDEQGLIVEDLVEEV   63 (65)
T ss_dssp             CEEEESSCBCCCTTSSBCCBCTTCEEEEEEECT--TSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             cEEEEccccCCCCCCCcCcCCCCCEEEEeEecC--CCEEEEEECCCCCEEEEEhHHeEEC
Confidence            35899999999 999999999999999998766  6899999  5699999999999865

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.45  E-value=9.2e-14  Score=98.55  Aligned_cols=57  Identities=23%  Similarity=0.503  Sum_probs=51.9

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+.+.+||+|++||+|.|+.+.+  .+||+|+.+|+.|+||++||+++.
T Consensus         9 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~   65 (72)
T 2dl8_A            9 PIEAIAKFDYVGRTARELSFKKGASLLLYQRAS--DDWWEGRHNGIDGLIPHQYIVVQD   65 (72)
T ss_dssp             CEEEEESSCBCCSSSSBCCBCTTCEEEEEEEEE--TTEEEEEETTEEEEECSSSEEECC
T ss_pred             CEEEEECccCCcCCCCEeccCCCCEEEEEeecC--CCEEEEEECCEEEEEchHHeEEcC
Confidence            346899999999999999999999999998876  689999999999999999999754

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A

Probab=99.44  E-value=1.2e-13  Score=94.61  Aligned_cols=55  Identities=20%  Similarity=0.495  Sum_probs=49.8

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeee-eeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVS-YFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G-~fP~~yVeE~  252 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+.+++.| +||++||+++
T Consensus         4 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~W~~g~~~g~~gG~~P~~yv~~~   59 (61)
T 1y0m_A            4 SAVKALFDYKAQREDELTFTKSAIIQNVEKQD--GGWWRGDYGGKKQLWFPSNYVEEM   59 (61)
T ss_dssp             CCEEESSCBCCCSTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEEGGGEEEC
T ss_pred             CEEEECcCCCcCCCCCcCCcCCCEEEEEEecC--CCEEEEEECCeEEEEEChHHcEEC
Confidence            35899999999999999999999999998865  6899999998876 9999999875

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.44  E-value=1.3e-13  Score=99.98  Aligned_cols=60  Identities=17%  Similarity=0.225  Sum_probs=52.1

Q ss_pred             eeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       194 ~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ....++|+|||.+.+.+||+|++||+|.|+.+...+.|||.|+.+|+.|+||++||+.+.
T Consensus        16 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   75 (81)
T 1x43_A           16 NNRKARVLYDYDAANSTELSLLADEVITVFSVVGMDSDWLMGERGNQKGKVPITYLELLN   75 (81)
T ss_dssp             CCEEEEESSCCCCSSTTBCCCCTTCEEEEECCTTCCTTEEEEEETTEEEEEEGGGEEECC
T ss_pred             CCeEEEEcccCCCCCCCcCCCCCCCEEEEEEcCCCCCCcEEEEECCCEEEEehHHEEECC
Confidence            345789999999999999999999999999873211689999999999999999999754

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.44  E-value=1.2e-13  Score=96.45  Aligned_cols=54  Identities=33%  Similarity=0.557  Sum_probs=49.8

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE-eCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~-~~g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.+...+||+|.+||+|.|+.+.+  .|||.|+ .+|+.|+||++||+++
T Consensus         4 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~~g~~G~~P~~yv~~~   58 (67)
T 1gl5_A            4 IVVAMYDFQATEAHDLRLERGQEYIILEKND--LHWWRARDKYGSEGYIPSNYVTGK   58 (67)
T ss_dssp             CEEECSCBCCSSSSBCCBCTTCEEEEEECSS--SSEEEEECSSSCEEEEETTSEESS
T ss_pred             EEEECccCCCCCCCeecCCcCCEEEEEEccC--CCcEEEEECCCCEEEEEhHhEEEc
Confidence            5889999999999999999999999998865  6899999 5799999999999986

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A

Probab=99.44  E-value=9.3e-14  Score=96.27  Aligned_cols=55  Identities=22%  Similarity=0.521  Sum_probs=49.9

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--------Ceeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--------ERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--------g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .|||.|+..        |+.|+||++||+++
T Consensus         2 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~~~~~g~~~g~~G~~P~~yv~~l   64 (65)
T 2oaw_A            2 ELVLALYDYQEKSPREVTMKKGDILTLLNSTN--KDWWKVEVKITVNGKTYERQGFVPAAYVKKL   64 (65)
T ss_dssp             EEEEECSCBCCSSTTBCCBCTTCEEEEEECCS--SSEEEEEEEEEETTEEEEEEEEEEGGGEEEC
T ss_pred             cEEEEcccCCccCCCCCCCCCCCEEEEEEcCC--CCEEEEEEccccCCCcCCcEEEEchHHeEEc
Confidence            36899999999999999999999999998766  689999987        89999999999864

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A

Probab=99.44  E-value=1.4e-13  Score=95.04  Aligned_cols=55  Identities=15%  Similarity=0.345  Sum_probs=50.1

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+.+.+||+|.+||+|.++.+.+  .|||.|+.  +|+.|+||++||+++
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~W~~g~~~~~g~~G~~P~~yv~~~   63 (64)
T 4f14_A            7 RTYRAMYDYSAQDEDEVSFRDGDYIVNVQPID--DGWMYGTVQRTGRTGMLPANYIEFV   63 (64)
T ss_dssp             -CEEESSCBCCCSTTBCCBCTTCEEEEEEECS--SSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             EEEEECeeeCCcCCCcCCCCCCCEEEEEEeCC--CCeEEEEECCCCCEEEEeHHHeEEC
Confidence            45899999999999999999999999998876  68999999  799999999999875

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1

Probab=99.44  E-value=1.2e-13  Score=97.99  Aligned_cols=58  Identities=19%  Similarity=0.477  Sum_probs=52.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~m  255 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+.+.+  .+||.|+.+|+.|+||++||+++...
T Consensus         6 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~~~   63 (73)
T 3thk_A            6 ELVLALYDYQEKSPREVTMKKGDILTLLNSTN--KDWWKVEVNDRQGFVPAAYVKKLDPA   63 (73)
T ss_dssp             CEEEECSCBCCCSTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEEECCC-
T ss_pred             EEEEECcCCCcCCCCccCCCCCCEEEEEECCC--CCeEEEEECCcEEEEehHHeEECCCC
Confidence            46899999999999999999999999998766  68999999999999999999986543

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A

Probab=99.44  E-value=1.5e-13  Score=94.54  Aligned_cols=57  Identities=19%  Similarity=0.343  Sum_probs=50.9

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+..+ .+||.|+.+|+.|+||++||++++
T Consensus         6 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~-~~W~~~~~~g~~G~~P~~yv~~~~   62 (63)
T 3eg3_A            6 NLFVALYDFVASGDNTLSITKGEKLRVLGYNHN-GEWCEAQTKNGQGWVPSAYITPVN   62 (63)
T ss_dssp             TEEEESSCBCCCSSSBCCBCTTCEEEEEEECTT-SSEEEEEETTEEEEEEGGGEEESC
T ss_pred             EEEEEcceECCCCCCccCCCCCCEEEEEEeCCC-CCeEEEEECCCeEEEehHHeEECC
Confidence            468999999999999999999999999986543 579999999999999999999753

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=99.44  E-value=8.6e-14  Score=98.86  Aligned_cols=55  Identities=27%  Similarity=0.506  Sum_probs=50.3

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGN  251 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE  251 (272)
                      ...++|+|||.+.+.+||+|++||+|.|+.+.+  .|||+|+..|+.|+||++||++
T Consensus        17 ~~~~~Alydy~a~~~~eLsf~~Gd~i~Vl~~~~--~gWw~g~~~g~~G~fP~~yV~~   71 (72)
T 2l0a_A           17 ARKVRAIYDFEAAEDNELTFKAGEIITVLDDSD--PNWWKGETHQGIGLFPSNFVTA   71 (72)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEEEEEE--TTEEEEECSSCEEECTTCCEEE
T ss_pred             CeEEEECCccCCCCCCccCCCCCCEEEEEEecC--CCEEEEEECCCEEEechhhCcc
Confidence            346899999999999999999999999998766  6899999999999999999974

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A

Probab=99.44  E-value=1.1e-13  Score=99.28  Aligned_cols=57  Identities=21%  Similarity=0.386  Sum_probs=51.1

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCC---eeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDE---RVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g---~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+...+||+|.+||+|.|+.+.+  .|||+|+..+   +.|+||++||+++.
T Consensus        10 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~--~~Ww~g~~~~~~g~~G~~P~~yv~~~~   69 (76)
T 2ed1_A           10 VRRVKTIYDCQADNDDELTFIEGEVIIVTGEED--QEWWIGHIEGQPERKGVFPVSFVHILS   69 (76)
T ss_dssp             CEEEEESSCCCCSSSSBCCCCSSCEEEESSCCS--SSEEEEEETTCTTCEEEEEGGGEEECC
T ss_pred             CeEEEECccCCCCCcCCcCcCCCCEEEEEEecC--CCEEEEEECCCCCCEEEEehHHeEECC
Confidence            346899999999999999999999999998766  6899999876   99999999999764

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.44  E-value=1.1e-13  Score=97.83  Aligned_cols=57  Identities=19%  Similarity=0.347  Sum_probs=49.4

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEee-eeCCcCCeEEEE-eCCeeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLS-KEGEQKGWWKGK-IDERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~-k~ge~~gwW~G~-~~g~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+. +.+  .|||.|+ .+|+.|+||++||++.+
T Consensus        11 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~--~~Ww~g~~~~g~~G~~P~~yv~~~~   69 (71)
T 1csk_A           11 GTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKD--PNWYKAKNKVGREGIIPANYVQKRE   69 (71)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEEEECSS--TTEEEEECTTSCEEEEETTSEEC--
T ss_pred             CCEEEEceeECcCCCCcCCCCCCCEEEEeECCCC--CCCEEEEeCCCCEEEEehHHeEEcc
Confidence            346899999999999999999999999998 444  6899999 67999999999999764

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A

Probab=99.44  E-value=1.1e-13  Score=95.22  Aligned_cols=57  Identities=16%  Similarity=0.406  Sum_probs=49.9

Q ss_pred             ceeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhh
Q psy3210         193 FRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNF  252 (272)
Q Consensus       193 ~~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~  252 (272)
                      .....++|+|||.+.+.+||+|++||+|.|+.+.   .|||.|+.  +|+.|+||++||+++
T Consensus         4 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~---~~Ww~g~~~~~g~~G~~P~~yv~~~   62 (62)
T 2iim_A            4 LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQS---GEWWKAQSLTTGQEGFIPFNFVAKA   62 (62)
T ss_dssp             TTTCEEEESSCBCCCSTTBCCBCTTCEEEEEECC---SSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCCcEEEEcccCCCCCCCCcCCCCCCEEEEEEcC---CCEEEEEECCCCCEEEEEHHHEEEC
Confidence            3445789999999999999999999999999873   47999994  799999999999863

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=1.3e-13  Score=96.61  Aligned_cols=55  Identities=24%  Similarity=0.410  Sum_probs=50.8

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .+||.|+.+|+.|+||++||+++
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~   62 (68)
T 1x2p_A            8 EEFVAIADYAATDETQLSFLRGEKILILRQTT--ADWWWGERAGCCGYIPANHVGKH   62 (68)
T ss_dssp             CEEEESSCCCCSSTTBCCCCTTCEEEEEECCS--SSEEEEECTTCCEEEESSSEECC
T ss_pred             CEEEECceECCCCcCCcCCCCCCEEEEEEcCC--CCEEEEEECCeEEEEehHHeEEC
Confidence            46899999999999999999999999998765  68999999999999999999875

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.44  E-value=1.1e-13  Score=103.22  Aligned_cols=58  Identities=17%  Similarity=0.256  Sum_probs=51.3

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      .++|+|||.+.+.+||+|++||+|.|+.+...+.|||+|+.+|+.|+||++||+++..
T Consensus         7 ~~~Alydy~a~~~~eLsf~~Gd~i~v~~~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~   64 (93)
T 1uff_A            7 GYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPS   64 (93)
T ss_dssp             CEEESSCBCCCSSSCCCBCTTCEEEECSSCCCSSSEEEEEETTEEEEEETTTEEECCS
T ss_pred             EEEECccCCCCCCCCcCCCCCCEEEEeEccCCCCCEEEEEECCCEEEechHHeEEcCC
Confidence            5899999999999999999999999998752126899999999999999999997643

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=1.2e-13  Score=98.28  Aligned_cols=58  Identities=21%  Similarity=0.528  Sum_probs=51.0

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeC-CcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEG-EQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~g-e~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+.. ...|||+|+.+|+.|+||++||+++.
T Consensus         9 ~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   67 (73)
T 2dl7_A            9 CFVKALYDYEGQTDDELSFPEGAIIRILNKENQDDDGFWEGEFNGRIGVFPSVLVEELS   67 (73)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEECCCSSSSSCEEEEETTEEEEECSSSEEECC
T ss_pred             EEEEECccCCcCCCCcCCCCCCCEEEEEECCCCCCCCcEEEEECCCEEEEChHHEEECC
Confidence            46899999999999999999999999998741 12689999999999999999999754

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=1.3e-13  Score=96.65  Aligned_cols=55  Identities=20%  Similarity=0.413  Sum_probs=50.7

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .+||.|+.+|+.|+||++||+++
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~   62 (68)
T 1x2k_A            8 KVFRALYTFEPRTPDELYFEEGDIIYITDMSD--TNWWKGTSKGRTGLIPSNYVAEQ   62 (68)
T ss_dssp             EEEEESSCCCCCSTTBCCCCSSCEEEEEECSC--SSEEEEESSSCEEEEETTTEEEC
T ss_pred             EEEEECceECCCCCCcccCCCCCEEEEEEcCC--CCEEEEEECCcEEEEehHHeEEc
Confidence            46899999999999999999999999998755  68999999999999999999975

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}

Probab=99.43  E-value=1.9e-13  Score=96.07  Aligned_cols=56  Identities=18%  Similarity=0.369  Sum_probs=51.1

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .+||.|+.+|+.|+||++||+++.
T Consensus         9 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~   64 (69)
T 2dil_A            9 QEYRALYDYTAQNPDELDLSAGDILEVILEGE--DGWWTVERNGQRGFVPGSYLEKLS   64 (69)
T ss_dssp             CEEECCSCBCCSSSSSCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGCCBCC
T ss_pred             cEEEECccCCccCcCccCCCCCCEEEEEECCC--CCEEEEEECCCEEEEehHHeEEcC
Confidence            46899999999999999999999999998855  689999999999999999998753

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=9.1e-14  Score=101.83  Aligned_cols=57  Identities=16%  Similarity=0.149  Sum_probs=51.5

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeee--eCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSK--EGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k--~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+.+  .+  .|||.|+.+|+.|+||++||+++..
T Consensus         9 ~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~--~~Ww~g~~~g~~G~fP~~yv~~~~~   67 (85)
T 2dlp_A            9 GYVIALRSYITDNCSLLSFHRGDLIKLLPVATLE--PGWQFGSAGGRSGLFPADIVQPAAA   67 (85)
T ss_dssp             CEEEESSCBCCSSSSBCCBCTTCEEEECCCSCCC--TTEEEEESSSCEEEEETTSEEECCC
T ss_pred             EEEEECCCCCccCcCCccCcCCCEEEEEEccCCC--CCeEEEEECCEEEEechHHeEECCC
Confidence            468999999999999999999999999986  44  7899999999999999999997653

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=1.5e-13  Score=98.96  Aligned_cols=56  Identities=21%  Similarity=0.501  Sum_probs=51.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+.+|+.|+||++||+++.
T Consensus        18 ~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~--~gWw~g~~~g~~G~~P~~yv~~~~   73 (78)
T 2ed0_A           18 EKVVAIYDYTKDKEDELSFQEGAIIYVIKKND--DGWYEGVMNGVTGLFPGNYVESIS   73 (78)
T ss_dssp             EEEEECSCBCCSSTTBCCBCSSCEEEEEEECS--SSEEEEEETTEEEEEETTSEEECS
T ss_pred             EEEEECccCCccCcCcccccCCCEEEEEEeCC--CCEEEEEECCcEEEeChHHEEEcC
Confidence            35899999999999999999999999998866  689999999999999999998753

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A

Probab=99.43  E-value=8e-14  Score=97.63  Aligned_cols=57  Identities=21%  Similarity=0.464  Sum_probs=49.1

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE~~~m  255 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+++ +  .|||.|+. +|+.|+||++||+++...
T Consensus         5 ~~~~Alydy~a~~~~ELsf~~Gd~i~vl~~-~--~~Ww~~~~~~g~~G~~Psnyv~~~~~~   62 (67)
T 2b86_A            5 VIVIAKWDYTAQQDQELDIKKNERLWLLDD-S--KTWWRVRNAANRTGYVPSNYVERKLEH   62 (67)
T ss_dssp             EEEEESSCBCCSSTTSCCBCTTCEEEEEEC-S--SSSCEEECTTSCEEECCCCSEEEC---
T ss_pred             eEEEEeeeECCCCCCccccCCCCEEEEEec-C--CCeEEEEeCCCCEEEeChHHEeEcCCC
Confidence            468999999999999999999999999987 3  58999994 799999999999976544

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*

Probab=99.43  E-value=1.4e-13  Score=97.64  Aligned_cols=55  Identities=18%  Similarity=0.449  Sum_probs=50.5

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .+||+|+.  +|+.|+||++||+++
T Consensus        16 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~~~g~~G~~P~~yv~~~   72 (73)
T 3h0h_A           16 TLFVALYDYEAITEDDLSFHKGEKFQILNSSE--GDWWEARSLTTGETGYIPSNYVAPV   72 (73)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEECSS--SSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             EEEEECccCCCCCCCcceEeCCCEEEEEEecC--CCeEEEEECCCCCEEEEEHHHeEEC
Confidence            46889999999999999999999999998776  68999998  799999999999975

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}

Probab=99.43  E-value=1.5e-13  Score=93.37  Aligned_cols=54  Identities=28%  Similarity=0.473  Sum_probs=49.5

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.+...+||+|++||+|.|+.+.+  .|||.|+..  |+.|+||++||+.+
T Consensus         3 ~~~al~d~~~~~~~eLs~~~Gd~i~v~~~~~--~gW~~g~~~~~g~~G~~P~~yv~~~   58 (59)
T 1yn8_A            3 RAVALYDFEPENDNELRLAEGDIVFISYKHG--QGWLVAENESGSKTGLVPEEFVSYI   58 (59)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEEEEE--TTEEEEECTTSSCEEEEEGGGEEEC
T ss_pred             EEEECccCCCCCCCCcCCCCCCEEEEEEcCC--CCeEEEEECCCCCEEEEehHHeEEC
Confidence            5899999999999999999999999998876  689999986  79999999999865

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A

Probab=99.43  E-value=1.7e-13  Score=93.44  Aligned_cols=55  Identities=18%  Similarity=0.468  Sum_probs=49.1

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGN  251 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE  251 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+..+ .|||.|+.  +|+.|+||++||+.
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~   59 (60)
T 2v1q_A            3 ERGIVQYDFMAESQDELTIKSGDKVYILDDKKS-KDWWMCQLVDSGKSGLVPAQFIEP   59 (60)
T ss_dssp             CEEEECSCBCCCSTTBCCBCTTCEEEEEESSSC-SSEEEEEETTTCCEEEEEGGGEEE
T ss_pred             cEEEEeeeECCCCCCCccCCCCCEEEEEeCCCC-CCCEEEEECCCCCEEEEEHHHEEE
Confidence            368999999999999999999999999987322 68999999  79999999999985

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}

Probab=99.43  E-value=1.4e-13  Score=97.28  Aligned_cols=56  Identities=18%  Similarity=0.233  Sum_probs=50.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE--eCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK--IDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~--~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .|||.|+  .+|+.|+||++||+++.
T Consensus         7 ~~~~al~~y~~~~~~eLs~~~Gd~i~v~~~~~--~gW~~g~~~~~g~~G~fP~~yv~~~~   64 (71)
T 2fpf_A            7 QTHRAIFRFVPRHEDELELEVDDPLLVELQAE--DYWYEAYNMRTGARGVFPAYYAIEVT   64 (71)
T ss_dssp             CCEEECSCBCCSSTTBCCBCTTCEEEEEEECT--TSEEEEEETTTTEEEEEEGGGEEECC
T ss_pred             eEEEECeeECccCCCcccCcCCcEEEEeEecC--CCEEEEEECCCCCEEEeehHHEEECC
Confidence            35899999999999999999999999997766  6899999  57999999999998764

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=1.4e-13  Score=99.55  Aligned_cols=58  Identities=24%  Similarity=0.442  Sum_probs=51.7

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+...+||+|++||+|.|+.+.+.+.|||.|+.+|+.|+||++||++.
T Consensus        17 ~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~   74 (80)
T 2d8h_A           17 PIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGIFPANYVTMN   74 (80)
T ss_dssp             CEEEECSSCEECSSTTBCEECTTCEEEEEECCSCSSSEEEEEETTEEEEEEGGGCCBC
T ss_pred             CEEEEECccCCcCCCCeeeEcCCCEEEEeECcCCCCCeEEEEECCEEEEEchhHeEEc
Confidence            4568999999999999999999999999987642368999999999999999999864

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=1.2e-13  Score=101.89  Aligned_cols=57  Identities=23%  Similarity=0.240  Sum_probs=50.9

Q ss_pred             eeeeeeeccCC--CCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFC--PTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~--~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.  +++.+||+|++||+|.|+.+.+  .|||+|+.+|+.|+||++||+++.
T Consensus        16 ~~~~~alydy~~~a~~~~eLsf~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~fP~~yv~~~~   74 (88)
T 2dbk_A           16 PVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNI--NGQWEGEVNGRKGLFPFTHVKIFD   74 (88)
T ss_dssp             CEEEEECSCBCCCTTCSSBCCBCTTCEEEEEEECT--TSCEEEECSSCEEEECTTTEEECC
T ss_pred             CEEEEEcccccCCCCCCCcccCCCCCEEEEEEecC--CCEEEEEeCCCEEEEehHHeEECC
Confidence            34689999999  4499999999999999998866  689999999999999999999764

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.43  E-value=1.2e-13  Score=96.53  Aligned_cols=56  Identities=21%  Similarity=0.362  Sum_probs=47.9

Q ss_pred             eeeeeeccCCCCCCCC-CccCCCcEEEEeeeeCCcCCeEEEE--eCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQ-LPLKQGCQVIVLSKEGEQKGWWKGK--IDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~E-Lsl~~Gd~i~v~~k~ge~~gwW~G~--~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+.+.+| |+|.+||+|.|+.+..+ .|||.|+  .+|+.|+||++||+++
T Consensus         8 ~~~~al~dy~~~~~~e~Lsf~~Gd~i~v~~~~~~-~gW~~g~~~~~g~~G~fP~~yv~~l   66 (67)
T 3rnj_A            8 MRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEAR-DGWHYGESEKTKMRGWFPFSYTRVL   66 (67)
T ss_dssp             CEEEESSCBCCCSCTTBCCBCTTCEEEECSSSCB-TTEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             eEEEEccccCCCCCCCCccCCCCCEEEEeeccCC-CCCEEEEECCCCCEEEEEHHHeEEC
Confidence            4689999999988776 99999999999965322 6899999  6799999999999864

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1

Probab=99.43  E-value=1.6e-13  Score=100.20  Aligned_cols=56  Identities=20%  Similarity=0.513  Sum_probs=51.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+++.
T Consensus        18 ~~~~Alydy~a~~~~eLsf~~Gd~i~Vl~~~~--~gWw~g~~~g~~G~~P~~yv~~~~   73 (83)
T 1neg_A           18 ELVLALYDYQEKSPREVTMKKGDILTLLNSTN--KDWWKVEVNDRQGFVPAAYVKKLA   73 (83)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEEECC
T ss_pred             eEEEEccccCCCCCCccccCCCCEEEEEEecC--CCEEEEEECCeEEEEEHHHEEECC
Confidence            45899999999999999999999999998766  689999999999999999999753

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=1.4e-13  Score=103.42  Aligned_cols=59  Identities=24%  Similarity=0.408  Sum_probs=52.2

Q ss_pred             eeeeeeeccCCCC--------CCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         195 QIIAVAEFDFCPT--------EANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       195 ~~~~~alydf~~~--------~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ...++|+|||.+.        ..+||+|++||+|.|+++.++ .|||+|+.+|+.|+||++||++++.
T Consensus        17 ~~~~~Alydy~~~~~~~~~~~~~~eLsf~~Gd~i~vl~~~~~-~gWw~g~~~g~~G~~P~~yv~~~~~   83 (97)
T 2csq_A           17 ARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDA-DGFYRGETCARLGLIPCNMVSEIQA   83 (97)
T ss_dssp             CEEEECSSCBCTTTTSSCHHHHTTBCCBCTTCEEEEEEEECT-TCEEEEEETTEEEEEETTTSEECCC
T ss_pred             ceEEEEccccCCCcccccCCCCCCccCCCCCCEEEEEEecCC-CCeEEEEECCcEEEEehHHeEECCC
Confidence            3468999999998        789999999999999977654 5899999999999999999997753

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A

Probab=99.43  E-value=2.1e-13  Score=92.30  Aligned_cols=53  Identities=26%  Similarity=0.484  Sum_probs=48.9

Q ss_pred             eeeeeccC-CCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhh
Q psy3210         197 IAVAEFDF-CPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGN  251 (272)
Q Consensus       197 ~~~alydf-~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE  251 (272)
                      .++|+||| .+...+||+|++||+|.|+.+.+  .|||.|+..  |+.|+||++||++
T Consensus         2 ~~~al~d~~~~~~~~eLs~~~Gd~i~v~~~~~--~gW~~g~~~~~g~~G~~P~~yv~~   57 (58)
T 1zuy_A            2 MFEAAYDFPGSGSPSELPLKKGDVIYITREEP--SGWSLGKLLDGSKEGWVPTAYMKP   57 (58)
T ss_dssp             EEEESSCBCCCSCTTBCCBCTTCEEEEEEECT--TSEEEEEESSCSCEEEEEGGGEEC
T ss_pred             EEEEecccCCCCCCCcCCCCCCCEEEEEEecC--CCeEEEEECCCCCEEEecHHHEEE
Confidence            47899999 89999999999999999998876  689999998  9999999999985

>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}

Probab=99.43  E-value=1.9e-13  Score=96.63  Aligned_cols=55  Identities=24%  Similarity=0.411  Sum_probs=50.9

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||+|+.+|+.|+||++||+++
T Consensus        14 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~W~~g~~~g~~G~~P~~yv~~~   68 (72)
T 4glm_A           14 TYGVALYRFQALEPNELDFEVGDKIRILATLE--DGWLEGSLKGRTGIFPYRFVKLC   68 (72)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEEECS--TTEEEEEETTEEEEEEGGGEEEE
T ss_pred             eEEEECccCCCCCCCcCCCCCCCEEEEEEccC--CCEEEEEECCcEEEEChHHeEEC
Confidence            45899999999999999999999999998776  68999999999999999999975

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.43  E-value=1.8e-13  Score=96.38  Aligned_cols=58  Identities=21%  Similarity=0.447  Sum_probs=51.0

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+...+||+|++||+|.|+.+...+.|||.|+.+|+.|+||++||+++
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~~   64 (70)
T 2da9_A            7 GDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLL   64 (70)
T ss_dssp             SEEEEECSCCCCSSTTBCCCCTTEEEEEEECCCSSTTEEEEECSSCEEEEEGGGEEEC
T ss_pred             CcEEEECcCCCCCCcCEeeEcCCCEEEEEECCCCCCCeEEEEECCcEEEechHHeEEC
Confidence            3468999999999999999999999999987411268999999999999999999865

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A

Probab=99.42  E-value=1.6e-13  Score=96.10  Aligned_cols=56  Identities=29%  Similarity=0.491  Sum_probs=51.1

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+...+||+|.+||+|.|+.+.+  .+||.|+.+|+.|+||++||+++
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~W~~g~~~g~~G~~P~~yv~~~   62 (68)
T 2dl3_A            7 GRPARAKFDFKAQTLKELPLQKGDIVYIYKQID--QNWYEGEHHGRVGIFPRTYIELL   62 (68)
T ss_dssp             SEEEEESSCBCCSSTTBCCBCTTCEEEEEECCS--TTEEEEECSSCEEEEETTTEEEC
T ss_pred             CcEEEECccCCCCCcCCccCCCCCEEEEeEecC--CCEEEEEECCCEEEEchHHEEEC
Confidence            346899999999999999999999999998766  68999999999999999999875

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.42  E-value=2.2e-13  Score=100.45  Aligned_cols=58  Identities=28%  Similarity=0.448  Sum_probs=52.3

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ...++|+|||.+.+.+||+|++||+|.|+.+.+  .|||+|+..|+.|+||++||+++..
T Consensus        17 ~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~~   74 (88)
T 1x2q_A           17 ARKVRALYDFEAVEDNELTFKHGEIIIVLDDSD--ANWWKGENHRGIGLFPSNFVTTNLN   74 (88)
T ss_dssp             CEEEEESSCCCCCSSSCCCCCSSCEEEEEECSC--SSSEEEEETTEEEEECGGGEESCSS
T ss_pred             CeEEEEcccCCCCCcCccCCCCCCEEEEEEeCC--CCEEEEEECCcEEEEehHHEEEcCC
Confidence            456899999999999999999999999998765  6899999999999999999997543

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.42  E-value=1.9e-13  Score=98.42  Aligned_cols=57  Identities=16%  Similarity=0.303  Sum_probs=51.8

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .+||.|+.+|+.|+||++||+++..
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (78)
T 2yuo_A            8 RRAKALLDFERHDDDELGFRKNDIITIISQKD--EHCWVGELNGLRGWFPAKFVEVLDE   64 (78)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEEEECC
T ss_pred             eEEEECccCCCCCCCCccCCCCCEEEEEEecC--CCEEEEEECCCEEEEehHHEEECCC
Confidence            46899999999999999999999999998766  6899999999999999999997643

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=2.1e-13  Score=98.74  Aligned_cols=56  Identities=18%  Similarity=0.299  Sum_probs=51.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .|||.|+.+|+.||||++||+++.
T Consensus         9 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~--~gWw~g~~~g~~G~~P~~yv~~~~   64 (80)
T 2ekh_A            9 TSYMTCSAYQKVQDSEISFPAGVEVQVLEKQE--SGWWYVRFGELEGWAPSHYLVLDE   64 (80)
T ss_dssp             EEEEECSCBCCSSTTSCCBCTTCEEEEEEECT--TSEEEEEETTEEEEEETTTEECCC
T ss_pred             CEEEECCCCCCCCCCccCcCCCCEEEEEEeCC--CCeEEEEECCCEEEEEhHHeEECC
Confidence            46899999999999999999999999998776  689999999999999999999754

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}

Probab=99.42  E-value=1.9e-13  Score=97.35  Aligned_cols=56  Identities=27%  Similarity=0.454  Sum_probs=50.8

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+..  |+.|+||++||+++.
T Consensus         6 ~~~~Alydy~a~~~~eLs~~~Gd~i~v~~~~~--~gWw~g~~~~~g~~G~~P~~yv~~~~   63 (73)
T 2lcs_A            6 QRAVALYDFEPENDNELRLAEGDIVFISYKHG--QGWLVAENESGSKTGLVPEEFVSYIQ   63 (73)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEEEET--TTEEEEECTTSSCEEEEESTTEEECC
T ss_pred             CEEEECccCCCCCCCccCCcCCCEEEEEEEcC--CCEEEEEECCCCCEEEeeHHHEEECC
Confidence            45899999999999999999999999998876  689999986  899999999999653

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.42  E-value=1e-13  Score=97.49  Aligned_cols=56  Identities=23%  Similarity=0.456  Sum_probs=50.7

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+ +  .|||+|+.+|+.|+||++||+++..
T Consensus         9 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~--~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (69)
T 1uhf_A            9 EEYIALYPYSSVEPGDLTFTEGEEILVTQK-D--GEWWTGSIGDRSGIFPSNYVKPKDS   64 (69)
T ss_dssp             EEEECSSCBCCSSSSBCCBCTTCEEEECEE-E--TTEEEECSTTCCEEECGGGCEECCC
T ss_pred             CEEEEeeeECCCCcCccCCCCCCEEEEEEe-C--CCEEEEEeCCcEEEEchHHeEECCC
Confidence            468999999999999999999999999987 4  6899999999999999999997643

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.2e-13  Score=98.98  Aligned_cols=58  Identities=19%  Similarity=0.335  Sum_probs=52.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~m  255 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+.+  .+||+|+.+|+.|+||++||+++...
T Consensus        11 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~~~   68 (76)
T 2epd_A           11 VEAVACFAYTGRTAQELSFRRGDVLRLHERAS--SDWWRGEHNGMRGLIPHKYITLPAGT   68 (76)
T ss_dssp             EEEEESSCEECSSTTBCEECTTCEEEEEEEEE--TTEEEEEETTEEEEEESSSEECCSSC
T ss_pred             EEEEECcCCCCCCCCccCCCCCCEEEEEEeCC--CCEEEEEECCcEEEEehHHEEEcCCC
Confidence            45899999999999999999999999998866  68999999999999999999976543

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}

Probab=99.42  E-value=2.5e-13  Score=95.84  Aligned_cols=59  Identities=19%  Similarity=0.453  Sum_probs=52.1

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNFRL  254 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~~~  254 (272)
                      ...++|+|||.+...+||+|.+||+|.|+.+..+ .|||.|+.  +|+.|+||++||+++..
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~~   66 (71)
T 2jt4_A            6 KKRGIVQYDFMAESQDELTIKSGDKVYILDDKKS-KDWWMCQLVDSGKSGLVPAQFIEPVRD   66 (71)
T ss_dssp             CEEEEECSCBCCSSTTBCCBCTTCEEEEEESSSC-SSEEEEEETTTCCEEEEEGGGEEETTT
T ss_pred             CCEEEEcccCCCCCCCcccCCCCCEEEEEECCCC-CCCEEEEECCCCCeEEechHHeEECCC
Confidence            3568999999999999999999999999987522 68999999  89999999999997654

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.42  E-value=2.6e-13  Score=97.07  Aligned_cols=58  Identities=17%  Similarity=0.288  Sum_probs=51.1

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe----CCeeeeeeccchhhhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI----DERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~----~g~~G~fP~~yVeE~~~m  255 (272)
                      ...++|+|||.+. .+||+|++||+|.|+.+.+  .|||.|+.    +|+.|+||++||+++..+
T Consensus        10 ~~~~~alydy~~~-~~eLs~~~Gd~i~vl~~~~--~gWw~g~~~~~~~g~~G~~P~~yv~~~~~~   71 (75)
T 2egc_A           10 KDVYVSIADYEGD-EETAGFQEGVSMEVLERNP--NGWWYCQILDGVKPFKGWVPSNYLEKKNSG   71 (75)
T ss_dssp             CEEEEECSCBCCC-SSSCCBCTTCEEEECEECT--TSEEEEEECCSSSCEEEEEEGGGEEECCSC
T ss_pred             CeEEEECCCcCCC-CCcCCCCCCCEEEEEEcCC--CCeEEEEeCCCCCCcEEEEehHHCEECCCC
Confidence            4468999999998 9999999999999998876  68999998    468999999999987643

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.42  E-value=6.7e-14  Score=98.08  Aligned_cols=56  Identities=21%  Similarity=0.521  Sum_probs=51.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+.+  .|||.|+.+|+.|+||++||+++.
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~   63 (68)
T 1wi7_A            8 RRCQVAFSYLPQNDDELELKVGDIIEVVGEVE--EGWWEGVLNGKTGMFPSNFIKELS   63 (68)
T ss_dssp             CCEEESSCBCCSSTTBCCBCTTCEECCCEEEE--TTEEEECSTTCCEEEETTSEEECC
T ss_pred             CEEEECccCCcCCCCCccCcCCCEEEEEEcCC--CCeEEEEECCcEEEEchHHEEECC
Confidence            46899999999999999999999999998866  689999999999999999999754

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A

Probab=99.41  E-value=1.6e-13  Score=96.89  Aligned_cols=57  Identities=19%  Similarity=0.384  Sum_probs=50.0

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE-eCCeeeeeeccchhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYFFQLYWGNFR  253 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~-~~g~~G~fP~~yVeE~~  253 (272)
                      .++|+|||.+.+.+||+|.+||+|.|+.+.+.+.|||.|+ .+|+.|+||++||+++.
T Consensus         8 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   65 (71)
T 1u5s_A            8 VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS   65 (71)
T ss_dssp             EEEESSCCCCCSSSBCCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECC
T ss_pred             EEEEcccCCCCCCCcccCCCCCEEEEEECCCCCCCCEEEEeCCCCEEEEeHHHEEECC
Confidence            5899999999999999999999999998732227899997 77999999999999753

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}

Probab=99.41  E-value=2.6e-13  Score=96.37  Aligned_cols=58  Identities=21%  Similarity=0.461  Sum_probs=51.1

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+...+||+|.+||+|.|+.+.....|||.|+.+|+.|+||++||+++
T Consensus         9 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~~   66 (73)
T 2k9g_A            9 KDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLL   66 (73)
T ss_dssp             CEEEEECSCBCCSSTTBCCBCTTCEEEEEECCSSSTTEEEEEETTEEEEEEGGGEEEC
T ss_pred             ccEEEECccCCCCCCCeeeECCCCEEEEEECCCCCCCEEEEEECCeEEEEchHHEEEC
Confidence            3468999999999999999999999999987511268999999999999999999865

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A

Probab=99.41  E-value=2.1e-13  Score=98.60  Aligned_cols=58  Identities=17%  Similarity=0.457  Sum_probs=50.3

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhhhhhc
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNFRLLS  256 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~~~mk  256 (272)
                      .++|+|||.+...+||+|.+||+|.|+++.+  .|||.|+.  +|+.|+||++||+++..+.
T Consensus         7 ~~~Alydy~~~~~~eLs~~~Gd~i~vl~~~~--~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~   66 (79)
T 3cqt_A            7 LFEALYDYEARTEDDLSFHKGEKFQILNSSE--GDWWEARSLTTGETGYIPSIYLAPVDRLD   66 (79)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEECTT--SSEEEEEETTTCCEEEEEGGGEEEC----
T ss_pred             EEEECccCCCCCcCcCCCCCCCEEEEEEecC--CCeEEEEECCCCCEEEeehHHeEECCccc
Confidence            5899999999999999999999999998765  68999999  7999999999999876544

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.41  E-value=2.4e-13  Score=92.11  Aligned_cols=53  Identities=9%  Similarity=0.271  Sum_probs=48.2

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWG  250 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVe  250 (272)
                      .++|+|||.+...+||+|++||+|.|+.+.++ .|||.|+.  +|+.|+||++||+
T Consensus         3 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~-~~W~~g~~~~~g~~G~~P~~yv~   57 (58)
T 1zuu_A            3 ENKVLYAYVQKDDDEITITPGDKISLVARDTG-SGWTKINNDTTGETGLVPTTYIR   57 (58)
T ss_dssp             CCEECSCBCCCSTTBCCBCTTCCEEEEECCSS-SSEEEEEETTTTEEEEEEGGGEE
T ss_pred             EEEEeeeECCcCCCcccCCCCCEEEEeEcCCC-CCCEEEEECCCCCEEEEEHHHEE
Confidence            47899999999999999999999999987642 58999999  8999999999996

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.41  E-value=1.7e-13  Score=96.52  Aligned_cols=56  Identities=23%  Similarity=0.340  Sum_probs=51.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+.+  .|||.|+.+|+.|+||++||+++.
T Consensus         9 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~   64 (70)
T 2ega_A            9 EQYVVVSNYKKQENSELSLQAGEVVDVIEKNE--SGWWFVSTSEEQGWVPATYLEAQN   64 (70)
T ss_dssp             BCEECCSCCCCCSSSSCCCCTTCBCEEEEECT--TSEEEEECSSCEEEEEGGGCEESC
T ss_pred             cEEEECceECCCCCCcccCCCCCEEEEEEccC--CCeEEEEECCCEEEEehHHcEECC
Confidence            35899999999999999999999999998766  689999999999999999999754

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A

Probab=99.41  E-value=2.5e-13  Score=95.38  Aligned_cols=56  Identities=25%  Similarity=0.424  Sum_probs=50.5

Q ss_pred             eeeeeeccCC-CCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFC-PTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~-~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||. +...+||+|++||+|.|+.+.+  .|||.|+..  |+.|+||++||+++.
T Consensus         3 ~~~~alydy~~~~~~~eLs~~~Gd~i~v~~~~~--~~W~~g~~~~~g~~G~~P~~yv~~~~   61 (69)
T 1ruw_A            3 PKFEAAYDFPGSGSSSELPLKKGDIVFISRDEP--SGWSLAKLLDGSKEGWVPTAYMTPYK   61 (69)
T ss_dssp             SEEEESSCBCCCSCTTBCCBCTTCEEEEEEECT--TSEEEEEETTSSCEEEEEGGGEEECC
T ss_pred             cEEEEccccCCCCCCCcccCCCCCEEEEEEecC--CCeEEEEECCCCCEEEEehHHeEEcC
Confidence            4589999995 9999999999999999998876  689999998  999999999998754

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}

Probab=99.41  E-value=2e-13  Score=95.35  Aligned_cols=55  Identities=22%  Similarity=0.326  Sum_probs=49.3

Q ss_pred             eeeeeeccCCC-CCCCCCccCCCcEEEEeee-eCCcCCeEEEEeC--Ceeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCP-TEANQLPLKQGCQVIVLSK-EGEQKGWWKGKID--ERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~-~~~~ELsl~~Gd~i~v~~k-~ge~~gwW~G~~~--g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+ .+.+||+|.+||+|.|+.+ .+  .|||.|+..  |+.|+||++||+++
T Consensus         7 ~~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~~~~--~~Ww~g~~~~~g~~G~~P~~yv~~~   65 (67)
T 2kxc_A            7 QKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEK--DGWLYGEHDVSKARGWFPSSYTKLL   65 (67)
T ss_dssp             CEEEESSCBCCSSCSSBCCBCTTCEEEESSSSCB--TTEEEEEESSSCCEEEEEGGGEEES
T ss_pred             EEEEEeecCCCCCCCCCCcCCCCCEEEEeECCCC--CCcEEEEECCCCCEEEEehHHeEEC
Confidence            46899999996 8999999999999999986 44  689999998  89999999999864

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A

Probab=99.41  E-value=2.6e-13  Score=94.79  Aligned_cols=55  Identities=22%  Similarity=0.506  Sum_probs=49.9

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCC--eeeeeeccchhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDE--RVSYFFQLYWGNFR  253 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g--~~G~fP~~yVeE~~  253 (272)
                      .++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+..+  +.|+||++||+++.
T Consensus         8 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~~~g~~G~~P~~yv~~~~   64 (67)
T 2o9s_A            8 EAIAKFNFNGDTQVEMSFRKGERITLLRQVD--ENWYEGRIPGTSRQGIFPITYVDVIK   64 (67)
T ss_dssp             EEEECSCBCCSSTTBCCBCTTCEEEEEEECS--SSEEEEECTTSSCEEEEEGGGEEEEE
T ss_pred             EEEECccCCcCCcCccCCCCCCEEEEEEecC--CCEEEEEECCCCCEEEEChHHeEECC
Confidence            5899999999999999999999999998766  6899999986  99999999998653

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.41  E-value=2.4e-13  Score=96.35  Aligned_cols=57  Identities=21%  Similarity=0.295  Sum_probs=50.3

Q ss_pred             eeeeeeeccCCC-CCCCCCccCCCcEEEEeee-eCCcCCeEEEEeC--Ceeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCP-TEANQLPLKQGCQVIVLSK-EGEQKGWWKGKID--ERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~-~~~~ELsl~~Gd~i~v~~k-~ge~~gwW~G~~~--g~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+ .+.+||+|.+||+|.|+.+ .+  .|||+|+..  |+.|+||++||+++.
T Consensus         7 ~~~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~~~~--~gWw~g~~~~~g~~G~fP~~yv~~~~   67 (72)
T 1spk_A            7 GQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEK--DGWLYGEHDTTKARGWFPSSYTKLLS   67 (72)
T ss_dssp             SCEEECSSCBCCSSCSSBCCBCTTCEEEECCSSCB--TTEEEEEETTTCCEEEEEGGGCEECS
T ss_pred             ceEEEEeeeeCCCCCCCCCcCCCCCEEEEeEccCC--CCcEEEEECCCCCEEEEehHHeEECC
Confidence            346899999996 8999999999999999976 44  689999998  999999999999753

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.41  E-value=1.9e-13  Score=96.48  Aligned_cols=58  Identities=24%  Similarity=0.477  Sum_probs=51.1

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeee-CCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKE-GEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~-ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+. ..+.|||.|+.+|+.|+||++||+++.
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   66 (71)
T 2cre_A            8 LLARALYDNCPDCSDELAFSRGDILTILEQHVPESEGWWKCLLHGRQGLAPANRLQILS   66 (71)
T ss_dssp             EEEEESSCCCCSSSSBCCCCSSCCEEEEESCCTTSTTEEEEESSSCCEEEETTTEEECC
T ss_pred             EEEEECcccCcCCCCCCCCCCCCEEEEeEcCCCCCCCcEEEEECCCEEEEehHHEEECC
Confidence            4689999999999999999999999999875 112789999999999999999999754

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.41  E-value=2.8e-13  Score=98.27  Aligned_cols=58  Identities=26%  Similarity=0.456  Sum_probs=52.5

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~m  255 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .+||+|+.+|+.|+||++||+++...
T Consensus        11 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~~~   68 (81)
T 2ysq_A           11 VSAEAVWDHVTMANRELAFKAGDVIKVLDASN--KDWWWGQIDDEEGWFPASFVRLWVNQ   68 (81)
T ss_dssp             EEEEESSCCCCSSSSSCCCCTTCEEEEEECCS--SSEEEEECSSCEEEEEGGGEEESSCC
T ss_pred             eEEEEeeeECCCCCCcCCCCCCCEEEEEEEcC--cCEEEEEECCCEEEechHHEEEcCCc
Confidence            46899999999999999999999999998765  68999999999999999999976543

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.41  E-value=2.2e-13  Score=98.32  Aligned_cols=57  Identities=16%  Similarity=0.371  Sum_probs=50.8

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCC--cCCeEEEEeCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGE--QKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge--~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+.+.  ..+||.|+.+|+.|+||++||+++
T Consensus        14 ~~~~Alydy~~~~~~eLs~~~Gd~i~vl~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~   72 (79)
T 1uhc_A           14 QVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKT   72 (79)
T ss_dssp             CCEEESSCBCCCSSSBCCBCTTCEEEEEESCCTTSCTTEEEEESSSCEEEEEGGGEEEC
T ss_pred             eEEEECccCCCCCCCccCCCCCCEEEEEECCCCCCCCCeEEEEeCCCEEEEchHHeEEC
Confidence            468999999999999999999999999987641  158999999999999999999974

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=2.8e-13  Score=95.61  Aligned_cols=56  Identities=16%  Similarity=0.301  Sum_probs=51.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .|||.|+..|+.|+||++||+++.
T Consensus         9 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~   64 (71)
T 2dnu_A            9 EKYVTVQPYTSQSKDEIGFEKGVTVEVIRKNL--EGWWYIRYLGKEGWAPASYLKKAK   64 (71)
T ss_dssp             EEEECSSCBCCSSTTBCCBCTTCEEEECCCCS--SSEEEEEETTEEEEEEGGGCEECC
T ss_pred             CEEEECCccCCCCCCCCcCCCCCEEEEeECCC--CCeEEEEECCcEEEEEHHHeEEcc
Confidence            46899999999999999999999999998765  689999999999999999999754

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=2.8e-13  Score=97.81  Aligned_cols=56  Identities=21%  Similarity=0.419  Sum_probs=51.3

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+.+  .+||+|+.+|+.|+||++||+++.
T Consensus        18 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~   73 (79)
T 1x69_A           18 ITAVALYDYQAAGDDEISFDPDDIITNIEMID--DGWWRGVCKGRYGLFPANYVELRQ   73 (79)
T ss_dssp             CCEEESSCCCCSSSSBCCCCTTCEEEEEEECS--SSEEEEEETTEEEEEETTSEEECC
T ss_pred             eEEEECccCCCCCCCCcCcCCCCEEEEeEecC--CCeEEEEECCcEEEechHHEEECC
Confidence            45899999999999999999999999998766  689999999999999999999754

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}

Probab=99.40  E-value=2.1e-13  Score=99.50  Aligned_cols=55  Identities=27%  Similarity=0.431  Sum_probs=49.5

Q ss_pred             eeeeeeccC-CCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC------Ceeeeeeccchhhh
Q psy3210         196 IIAVAEFDF-CPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID------ERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf-~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~------g~~G~fP~~yVeE~  252 (272)
                      ..++|+||| .+.+.+||+|++||+|.|+.+.+  .|||+|+..      |+.|+||++||+++
T Consensus        19 ~~~~Alydy~~a~~~~eLsf~~GDiI~V~~~~~--~gWw~G~~~~~~~~tg~~G~fPsnyV~~~   80 (83)
T 2ke9_A           19 LKVRALKDFWNLHDPTALNVRAGDVITVLEQHP--DGRWKGHIHESQRGTDRIGYFPPGIVEVV   80 (83)
T ss_dssp             EEEEESSCBCCCSCTTBCCBCTTCEEEESCSSC--SSCEEEEECCSSTTSCCCEEECGGGEESS
T ss_pred             eEEEEccccCCCCCCCcccccCCCEEEEEEecC--CCeEEEEECCCCCCCCCEEEechHHEEEC
Confidence            468999999 89999999999999999998766  679999986      69999999999865

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.40  E-value=1.9e-13  Score=97.92  Aligned_cols=59  Identities=29%  Similarity=0.584  Sum_probs=52.8

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~m  255 (272)
                      ...++|+|||.+...+||+|++||+|.|+.+.+  .|||.|+.+|+.|+||++||+++...
T Consensus        10 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~~~   68 (76)
T 1ujy_A           10 QLIVKARFNFKQTNEDELSVCKGDIIYVTRVEE--GGWWEGTLNGRTGWFPSNYVREIKSS   68 (76)
T ss_dssp             CEEEECCSCBCCSSTTSCCBCSSCCEEESSCCS--SSCEEEEETTEEEEECTTTSEECCHH
T ss_pred             CEEEEECccCCcCCCCcccCCCCCEEEEEEecC--CCEEEEEECCCEEEechHHEEECCcc
Confidence            346899999999999999999999999998765  68999999999999999999976543

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.40  E-value=3.3e-13  Score=99.51  Aligned_cols=56  Identities=29%  Similarity=0.630  Sum_probs=51.7

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+.+  .+||+|+.+|+.|+||++||+++.
T Consensus        18 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~gWw~g~~~g~~G~~P~~yv~~~~   73 (88)
T 2cub_A           18 MPAYVKFNYMAEREDELSLIKGTKVIVMEKCS--DGWWRGSYNGQVGWFPSNYVTEEG   73 (88)
T ss_dssp             EEEEESSCCCCCSTTBCCCCTTEEEEEEEECT--TSEEEEEETTEEEEEEGGGEEECC
T ss_pred             CEEEEccccCCCCCCCcCCCCCCEEEEEEccC--CCeEEEEECCcEEEEehHHEEECC
Confidence            46899999999999999999999999998876  689999999999999999999754

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.40  E-value=3.2e-13  Score=96.24  Aligned_cols=57  Identities=19%  Similarity=0.381  Sum_probs=51.2

Q ss_pred             eeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       194 ~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ....++|+|||.+...+||+|.+||+|.|+.+ +  .|||+|+.+|+.|+||++||+++.
T Consensus         9 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~--~~Ww~g~~~g~~G~~P~~yv~~~~   65 (74)
T 1j3t_A            9 ENLKAQALCSWTAKKDNHLNFSKHDIITVLEQ-Q--ENWWFGEVHGGRGWFPKSYVKIIP   65 (74)
T ss_dssp             CCCEEEESSCBCCCSTTBCCBCTTCEEEEEEE-C--SSEEEEESTTCCCEEEGGGEEECC
T ss_pred             CCeEEEECCCCCCCCCCccCCCCCCEEEEEec-C--CCEEEEEECCcEEEEchHHeEECC
Confidence            34568999999999999999999999999987 3  579999999999999999999753

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}

Probab=99.40  E-value=3.2e-13  Score=96.01  Aligned_cols=56  Identities=18%  Similarity=0.358  Sum_probs=50.5

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~m  255 (272)
                      .++|+|||.+ +.+||+|++||+|.|+.+.+  .|||.|+.+|+.|+||++||+++...
T Consensus         2 ~a~alydy~~-~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~~~   57 (73)
T 2kxd_A            2 GAPPLPPYSA-GGREVTMKKGDILTLLNSTN--KDWWKVEVNDRQGFVPAAYVKKLDSG   57 (73)
T ss_dssp             CCCCCCSSCC-CSCCCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEEECCSS
T ss_pred             eEEEeeeeCC-CCCEeeEcCCCEEEEEEecC--CCEEEEEECCCEEEEehHHeEEcCCC
Confidence            3789999998 89999999999999998876  68999999999999999999977543

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.40  E-value=2.6e-13  Score=100.41  Aligned_cols=57  Identities=25%  Similarity=0.412  Sum_probs=51.5

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||+|+..  |+.|+||++||+++.
T Consensus        17 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~--~~Ww~g~~~~~g~~G~fP~~yv~~~~   75 (90)
T 2yup_A           17 YGEAVAQYTFKGDLEVELSFRKGEHICLIRKVN--ENWYEGRITGTGRQGIFPASYVQVSR   75 (90)
T ss_dssp             SEEEEECSCCCCCSSSBCCCCTTCEEEESSCCC--SSEEEEECTTTCCEEEEEGGGEEEEE
T ss_pred             ceEEEEeecCCcCCcCcCCCCCCCEEEEEEEcC--CCeEEEEECCCCCEEEEehHHeEEcC
Confidence            346899999999999999999999999998765  689999997  899999999999764

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}

Probab=99.39  E-value=3.5e-13  Score=99.65  Aligned_cols=56  Identities=34%  Similarity=0.680  Sum_probs=50.0

Q ss_pred             eeeeeeeeccCCCCCCCCCccCCCcEEEEeeee----CCcCCeEEEEe-CCeeeeeeccchh
Q psy3210         194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKE----GEQKGWWKGKI-DERVSYFFQLYWG  250 (272)
Q Consensus       194 ~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~----ge~~gwW~G~~-~g~~G~fP~~yVe  250 (272)
                      ....++|+|||.+...+||+|++||+|.|+++.    ++ .|||.|+. +|+.|+||++||+
T Consensus        28 ~~~~~~Alydy~a~~~~ELsf~~GD~I~Vl~~~~~~~~~-~gWw~g~~~~g~~G~fP~nyV~   88 (89)
T 2rf0_A           28 AGPVWTAVFDYEAAGDEELTLRRGDRVQVLSQDCAVSGD-EGWWTGQLPSGRVGVFPSNYVA   88 (89)
T ss_dssp             CCCEEEECSCBCCSSTTBCCBCTTCEEEEEECCHHHHSS-TTEEEEECTTCCEEEEEGGGEE
T ss_pred             CCcEEEECCccCCCCCCccccCCCCEEEEEeccCCcccC-CCEEEEEECCCCEEEEcHHHCc
Confidence            345789999999999999999999999999875    12 68999999 8999999999997

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.39  E-value=2.5e-13  Score=95.43  Aligned_cols=56  Identities=29%  Similarity=0.585  Sum_probs=50.3

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCee-eeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERV-SYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~-G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+.+  .|||.|+..+.. |+||++||+++.
T Consensus         8 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~~~~~G~~P~~yv~~~~   64 (69)
T 2eqi_A            8 RTVKALYDYKAKRSDELTFCRGALIHNVSKEP--GGWWKGDYGTRIQQYFPSNYVEDIS   64 (69)
T ss_dssp             CEEEESSCBCCCSSSCCCBCTTCEEESCCCCS--SSCEEEEETTEEEEEECGGGEEECC
T ss_pred             cEEEECeeECCCCcCccCCCCCCEEEEEEcCC--CCeEEEEECCCCEEEEchHHcEECc
Confidence            46899999999999999999999999998765  689999998766 999999999754

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.39  E-value=3.2e-13  Score=97.50  Aligned_cols=56  Identities=21%  Similarity=0.325  Sum_probs=50.8

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+...+||+|++||+|.|+.+ +  .|||.|+.  +|+.|+||++||+++.
T Consensus        17 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~--~gW~~g~~~~~g~~G~fP~~yv~~~~   74 (79)
T 1x6b_A           17 LPQVEITKAFFAKQADEVTLQQADVVLVLQQ-E--DGWLYGERLRDGETGWFPEDFARFIS   74 (79)
T ss_dssp             CCEEEESSCCCCCSSSBCCCCTTEEEEEEEE-E--TTEEEEEETTTCCEEEECGGGCEEEE
T ss_pred             CCEEEECeeECCCCcCCcCCCCCCEEEEEEe-C--CCEEEEEECCCCCEEEEchHHEEECC
Confidence            3468999999999999999999999999988 4  68999999  8999999999998753

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=2.8e-13  Score=97.72  Aligned_cols=57  Identities=25%  Similarity=0.511  Sum_probs=51.7

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+.+|+.|+||++||+++..
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (79)
T 2yun_A            8 RLCKALYSFQARQDDELNLEKGDIVIIHEKKE--EGWWFGSLNGKKGHFPAAYVEELPS   64 (79)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEECCS--SSCEEEESSSCEEEECSTTEEEESS
T ss_pred             CEEEECccCCcCCCCCcCCCCCCEEEEEEcCC--CCEEEEEECCCEEEEEhHHeEECCC
Confidence            46899999999999999999999999998766  6899999999999999999997643

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.39  E-value=2.9e-13  Score=97.03  Aligned_cols=58  Identities=24%  Similarity=0.357  Sum_probs=52.3

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC---Cee------eeeeccchhhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID---ERV------SYFFQLYWGNFRLL  255 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~---g~~------G~fP~~yVeE~~~m  255 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+.+  .|||.|+..   |+.      |+||++||++++.+
T Consensus         8 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~~~~g~~~~~~~~G~~P~~yv~~~~~~   74 (77)
T 2d8j_A            8 QYFVALFDYQARTAEDLSFRAGDKLQVLDTSH--EGWWLARHLEKKGTGLGQQLQGYIPSNYVAEDSGP   74 (77)
T ss_dssp             EEEEESSCBCCSSSSBCCBCTTCCEEEEECCS--SSEEEEEECSSCCSSCCCCSEEEEETTTEEECCCC
T ss_pred             CEEEEccCCCCCCCCccCCCCCCEEEEEECCC--CCeEEEEECCCCCcCcccCCceEECHHHeeEcCCc
Confidence            46899999999999999999999999998865  689999998   888      99999999987654

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A

Probab=99.39  E-value=2.8e-13  Score=92.54  Aligned_cols=55  Identities=16%  Similarity=0.375  Sum_probs=49.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE-eCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~-~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+ +  .|||.|+ .+|+.|+||++||+++.
T Consensus         2 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~--~~Ww~~~~~~g~~G~~P~~yv~~~~   57 (60)
T 1i07_A            2 KYAKSKYDFVARNSSELSVMKDDVLEILDD-R--RQWWKVRNASGDSGFVPNNILDIMR   57 (60)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEECGG-G--CCEEEEECTTSCEEEEEGGGEEEEC
T ss_pred             eEEEECccCCCCCCCcccCCCCCEEEEEEc-C--CCeEEEEECCCCEEEEEHHHeEEcc
Confidence            358999999999999999999999999988 4  6899998 47999999999998754

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}

Probab=99.39  E-value=3.4e-13  Score=94.42  Aligned_cols=55  Identities=24%  Similarity=0.446  Sum_probs=50.0

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE-eCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~-~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .|||.|+ .+|+.|+||++||+++
T Consensus        11 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~~g~~G~~P~~yv~~~   66 (68)
T 1s1n_A           11 EEYIAVGDFTAQQVGDLTFKKGEILLVIEKKP--DGWWIAKDAKGNEGLVPRTYLEPY   66 (68)
T ss_dssp             EEEEECSCBCCSSSSCCCBCSSEEEEECSCCS--SSEEEEECSSSCEEEEESTTEEEC
T ss_pred             CEEEEcccCCCCCCCcCCCCCCCEEEEEEcCC--CCeEEEEECCCCEEEEehHHeEEC
Confidence            46889999999999999999999999998865  6899999 6799999999999865

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}

Probab=99.39  E-value=4.2e-13  Score=94.02  Aligned_cols=55  Identities=22%  Similarity=0.368  Sum_probs=49.9

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE-eCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~-~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+ +  .+||.|+ .+|+.|+||++||+++.
T Consensus         8 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~--~~Ww~~~~~~g~~G~~P~~yv~~~~   63 (68)
T 1wxt_A            8 LKMQVLYEFEARNPRELTVVQGEKLEVLDH-S--KRWWLVKNEAGRSGYIPSNILEPLS   63 (68)
T ss_dssp             EEEEESSCBCCCSSSBCCBCTTCEEEEEEC-S--SSEEEEECTTSCEEEEEGGGEECCC
T ss_pred             eEEEECceECCCCcCcCCCCCCCEEEEEEc-C--CCEEEEEECCCCEEEEEhHHcEECC
Confidence            358999999999999999999999999987 3  5899999 78999999999999764

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...

Probab=99.39  E-value=4.5e-13  Score=97.97  Aligned_cols=59  Identities=19%  Similarity=0.386  Sum_probs=52.9

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhhhhhc
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNFRLLS  256 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~~~mk  256 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.  +|+.|+||++||+++..+.
T Consensus         7 ~~~~Alydy~a~~~~eLsf~~Gd~i~vl~~~~--~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~   67 (84)
T 4ag1_C            7 TLFVALYDYNATRWTDLSFHKGEKFQILEFGP--GDWWEARSLTTGETGYIPSNYVAPVDSIQ   67 (84)
T ss_dssp             CEEEESSCBCCSBTTBCCBCTTCEEEEEECCS--SSEEEEEETTTCCEEEEEGGGEEETTTCC
T ss_pred             EEEEEcccCCCCCCCcccccCCCEEEEEEecC--CCeEEEEECCCCCEEEEehHHeEECCCcc
Confidence            36899999999999999999999999998776  68999999  7999999999999876554

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.39  E-value=1.1e-13  Score=97.87  Aligned_cols=56  Identities=11%  Similarity=0.157  Sum_probs=50.5

Q ss_pred             eeeeeeccCCC-CCCCCCccCCCcEEEEeeeeCCcCCeEEEE--eCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCP-TEANQLPLKQGCQVIVLSKEGEQKGWWKGK--IDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~-~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~--~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+ .+.+||+|++||+|.|+.+.+  .|||.|+  .+|+.|+||++||+++.
T Consensus         8 ~~~~Alydy~~~~~~~eLsf~~Gd~i~v~~~~~--~~W~~g~~~~~g~~G~~P~~yv~~~~   66 (71)
T 2gqi_A            8 RRVRAILPYTKVPDTDEISFLKGDMFIVHNELE--DGWMWVTNLRTDEQGLIVEDLVEEVS   66 (71)
T ss_dssp             CCEEESSCCCCCTTSSCCCCCTTCBCCCCEECS--SSCEEEECTTTCCEEEECTTSEEECC
T ss_pred             CEEEECcccCCCCCCCCCCCCCCCEEEEEEecC--CCEEEEEECCCCCEEEeeHHHEEECC
Confidence            46899999999 999999999999999998876  6899999  56999999999999764

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.39  E-value=4.3e-13  Score=96.89  Aligned_cols=59  Identities=27%  Similarity=0.535  Sum_probs=51.5

Q ss_pred             eeeeeeeccCCCCCCC-CCccCCCcEEEEeeeeCC---cCCeEEEEe-CCeeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEAN-QLPLKQGCQVIVLSKEGE---QKGWWKGKI-DERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~-ELsl~~Gd~i~v~~k~ge---~~gwW~G~~-~g~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+.+.+ ||+|++||+|.|+.+.++   ..|||.|+. +|+.|+||++||+++.
T Consensus        14 ~~~~~alydy~~~~~~~eLs~~~Gd~i~v~~~~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   77 (80)
T 2v1r_A           14 LEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIK   77 (80)
T ss_dssp             CEEEEESSCBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEEC-
T ss_pred             CEEEEECccCCCCCCCCEecCCCCCEEEEEECCCCCCCCCCcEEEEeCCCCeEEEEHHHeEEcC
Confidence            3568999999999999 999999999999988763   138999999 7999999999999754

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}

Probab=99.38  E-value=3.6e-13  Score=94.79  Aligned_cols=55  Identities=27%  Similarity=0.387  Sum_probs=50.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE--eCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK--IDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~--~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+.+  .|||.|+  .+|+.|+||++||+++
T Consensus         8 ~~~~al~~y~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~~~g~~G~~P~~yv~~~   64 (70)
T 2cuc_A            8 NMFVALHTYSAHRPEELDLQKGEGIRVLGKYQ--DGWLKGLSLLTGRTGIFPSDYVIPV   64 (70)
T ss_dssp             CCEECCSCBCCCSTTBCCBCTTCEEEEEEEEE--TTEEEEEETTTCCEEEEEGGGCEEC
T ss_pred             cEEEECeeECcCCCCcCCCCCCCEEEEEEecC--CCeEEEEECCCCCEEEEchHHeEEC
Confidence            46899999999999999999999999998876  6899999  6799999999999975

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}

Probab=99.38  E-value=3.8e-13  Score=95.37  Aligned_cols=59  Identities=19%  Similarity=0.465  Sum_probs=51.7

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhhhhhhc
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGNFRLLS  256 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE~~~mk  256 (272)
                      ...++|+|||.+...+||+|.+||+|.|+.+ +  .|||.|+. +|+.|+||++||+++..+.
T Consensus         7 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~--~~Ww~g~~~~g~~G~~P~~yv~~~~~~~   66 (72)
T 2jw4_A            7 EVVVVAKFDYVAQQEQELDIKKNERLWLLDD-S--KSWWRVRNSMNKTGFVPSNYVERKNSAR   66 (72)
T ss_dssp             CEEEECSSCCCCSSTTSCCCCTTCEEEEEEC-S--SSSEEEECTTSCEEEECTTSCEECCCCC
T ss_pred             CeEEEECcCCCcCCCCcccCCCCCEEEEEEC-C--CCEEEEEECCCCEEEEEhhHEEEcCCCc
Confidence            3468999999999999999999999999986 3  58999996 7999999999999865443

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=4.9e-13  Score=94.05  Aligned_cols=57  Identities=21%  Similarity=0.397  Sum_probs=51.2

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+...+||+|.+||+|.|+.+.+  .|||.|+..  ++.|+||++||+++.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~gW~~g~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2ct3_A            7 GTPYRAMYQYRPQNEDELELREGDRVDVMQQCD--DGWFVGVSRRTQKFGTFPGNYVAPVS   65 (70)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTEEEEEEEECS--SSCEEEEESSSCCEEEECTTTEEETT
T ss_pred             CcEEEECccCCcCCcCCccCCCCCEEEEEEECC--CCEEEEEECCCCCEEEechHHeEECC
Confidence            346899999999999999999999999998876  689999986  899999999999754

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=5.5e-13  Score=96.03  Aligned_cols=57  Identities=12%  Similarity=0.272  Sum_probs=50.9

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+.++ .+||+|+.. |+.|+||++||+++.
T Consensus        14 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~-~~Ww~g~~~~g~~G~~P~~yv~~~~   71 (78)
T 2dl5_A           14 LTCKVVYSYKASQPDELTIEEHEVLEVIEDGDM-EDWVKARNKVGQVGYVPEKYLQFPT   71 (78)
T ss_dssp             EEEEECSCBCCCSTTBCCBCSSEEEEEEECCSS-SSEEEEECTTCCEEEEETTTSCCSC
T ss_pred             cEEEEceeECCCCCCCCCCCCCCEEEEEeccCC-CCcEEEEeCCCCEEEEEhHHEEECC
Confidence            358999999999999999999999999987642 589999997 999999999999754

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}

Probab=99.37  E-value=5.1e-13  Score=98.96  Aligned_cols=58  Identities=19%  Similarity=0.365  Sum_probs=50.7

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE-eCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~-~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+.+.|||.|+ .+|+.|+||++||+++.
T Consensus        18 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   76 (91)
T 1wx6_A           18 HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS   76 (91)
T ss_dssp             EEEEESSCCCCSSSSBCCCCTTCEEEEEECCSSCTTEEEEECTTCCEEEEEGGGEEEEE
T ss_pred             EEEEEeecCCcCCCCcccCCCCCEEEEEECCCCCCCcEEEEeCCCCEEEEchHHEEECC
Confidence            35899999999999999999999999998732227899998 67999999999999764

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}

Probab=99.37  E-value=3.7e-13  Score=94.77  Aligned_cols=56  Identities=21%  Similarity=0.453  Sum_probs=50.6

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCC--eeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDE--RVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g--~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .+||+|+..+  +.|+||++||+++.
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2ecz_A            8 GEAIAKFNFNGDTQVEMSFRKGERITLLRQVD--ENWYEGRIPGTSRQGIFPITYVDVIS   65 (70)
T ss_dssp             BCEEESSCCCCCSTTBCCCCTTCBCEEEEEEE--TTEEEEEETTTTEEEEECTTTEEESS
T ss_pred             CEEEECccCCCCCcCCcCCCCCCEEEEEEecC--CCeEEEEECCCCCEEEEchHHEEECC
Confidence            46899999999999999999999999998766  6899999976  99999999999754

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}

Probab=99.37  E-value=4.8e-13  Score=94.70  Aligned_cols=56  Identities=18%  Similarity=0.354  Sum_probs=50.0

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe---CCee---eeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI---DERV---SYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~---~g~~---G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+...+||+|.+||+|.| .+.+  .|||.|+.   +|+.   |+||++||++++
T Consensus        10 ~~~~~alydy~~~~~~eLs~~~Gd~i~v-~~~~--~~Ww~g~~~~~~g~~~~~G~~P~~yv~~~~   71 (72)
T 2kgt_A           10 GPKYVGLWDFKSRTDEELSFRAGDVFHV-ARKE--EQWWWATLLDEAGGAVAQGYVPHNYLAERE   71 (72)
T ss_dssp             CCEEECCTTCBCSSTTSCBCCTTCCEEE-EEEC--SSCEEEEEECTTSCEEEEEEECTTTSEEEC
T ss_pred             CcEEEEcccCCCCCcCCcCCCCCCEEEE-eeCC--CCEEEEEEcCCCCCEeCCcEEcHhHEEEcc
Confidence            3468999999999999999999999999 7765  68999999   7999   999999998753

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.37  E-value=2.9e-13  Score=101.43  Aligned_cols=59  Identities=19%  Similarity=0.402  Sum_probs=51.4

Q ss_pred             eeeeeeeeccCCCCC------CCCCccCCCcEEEEe-eeeCCcCCeEEEEe-CCeeeeeeccchhhhhh
Q psy3210         194 RQIIAVAEFDFCPTE------ANQLPLKQGCQVIVL-SKEGEQKGWWKGKI-DERVSYFFQLYWGNFRL  254 (272)
Q Consensus       194 ~~~~~~alydf~~~~------~~ELsl~~Gd~i~v~-~k~ge~~gwW~G~~-~g~~G~fP~~yVeE~~~  254 (272)
                      ....++|+|||.+.+      .+||+|.+||+|.|+ .+.+  .|||+|+. +|+.|+||++||+++..
T Consensus        16 ~~~~~~Alydy~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~--~gWw~g~~~~g~~G~~Psnyv~~~~~   82 (96)
T 1wie_A           16 KVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDE--DGFYEGELLDGQRGLVPSNFVDFVQD   82 (96)
T ss_dssp             CEEEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESSCCS--SSCCEEEETTCCBCBCCTTSEECCCS
T ss_pred             CCcEEEECCccCCCcccCCCCCCeeeECCCCEEEEeEecCC--CCEEEEEECCCCEEEEchHHEEEcCC
Confidence            345689999999988      999999999999999 4444  68999999 89999999999997643

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=99.37  E-value=4.5e-13  Score=95.49  Aligned_cols=57  Identities=25%  Similarity=0.501  Sum_probs=50.4

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+.+.+||+|++||+|.|+.+..+ .+||.|+.+|+.|+||++||+.+
T Consensus         9 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~-~~Ww~g~~~g~~G~~P~~yv~~~   65 (74)
T 1gbq_A            9 SMEAIAKYDFKATADDELSFKRGDILKVLNEECD-QNWYKAELNGKDGFIPKNYIEMK   65 (74)
T ss_dssp             -CEEEESSCBCCSSTTBCCBCTTCEEECCBCSSC-SSEEEEEETTEEEEEEGGGEEEE
T ss_pred             CeEEEECccCCCCCCCeeeEcCCCEEEEeEecCC-CCEEEEEECCCEEEEehHhEEEc
Confidence            3468999999999999999999999999987632 68999999999999999999853

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.37  E-value=7.7e-13  Score=95.60  Aligned_cols=56  Identities=23%  Similarity=0.490  Sum_probs=50.5

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-----Ceeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-----ERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-----g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+..     ++.|+||++||+++.
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~gWw~g~~~~~g~~~~~G~fP~~yv~~~~   68 (80)
T 1ue9_A            8 EIAQVTSAYVASGSEQLSLAPGQLILILKKNT--SGWWQGELQARGKKRQKGWFPASHVKLLG   68 (80)
T ss_dssp             EEEEECSCCCCCSTTBCCCCTTCEEEEEEECS--SSEEEEEECSCCSSCCEEEEETTSEEECC
T ss_pred             eEEEECcccCCCCCCCCCCCCCCEEEEEEecC--CCcEEEEECCCCCCCcEEEEchHHeEECC
Confidence            46899999999999999999999999998866  689999987     489999999999764

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}

Probab=99.37  E-value=1.6e-13  Score=102.14  Aligned_cols=56  Identities=21%  Similarity=0.521  Sum_probs=51.5

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+++.
T Consensus        19 ~~~~Alydy~a~~~~eLsf~~Gd~i~V~~~~~--~gWw~g~~~g~~G~fPsnyV~~~~   74 (92)
T 2o2o_A           19 RRCQVAFSYLPQNDDELELKVGDIIEVVGEVE--EGWWEGVLNGKTGMFPSNFIKELS   74 (92)
T ss_dssp             CEEEECSCBCCCSSSCCCBCSSCEEECCCGGG--SSCBCCEETTEECCBCSSSEECCS
T ss_pred             eEEEEccccCCCCCccccccCCCEEEEeEecC--CCEEEEEECCeEEEeehHHEEECC
Confidence            46899999999999999999999999998765  689999999999999999999764

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A

Probab=99.37  E-value=2.4e-13  Score=104.06  Aligned_cols=57  Identities=16%  Similarity=0.258  Sum_probs=50.9

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCee---eeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERV---SYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~---G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+.+|+.   |+||++||+...
T Consensus         5 ~~~~~Alydy~a~~~~ELsf~~Gd~i~vl~~~~--~~Ww~g~~~g~~g~~G~fPsnYV~~~~   64 (108)
T 2rqv_A            5 SLYAIVLYDFKAEKADELTTYVGENLFICAHHN--CEWFIAKPIGRLGGPGLVPVGFVSIID   64 (108)
T ss_dssp             CCCEEESSCCCCCSSSBCCCCSSEEECCCCEET--TTEEEECCSSSSCCCEEEESTTCBCCC
T ss_pred             CeEEEECCCcCCCCCCcCCcCCCCEEEEeEecC--CCEEEEEECCccCCeeEeecceEEEec
Confidence            346899999999999999999999999998876  689999998766   999999999654

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A

Probab=99.37  E-value=2.2e-13  Score=95.10  Aligned_cols=55  Identities=25%  Similarity=0.539  Sum_probs=50.0

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE-eCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~-~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .+||.|+ .+|+.|+||++||+++
T Consensus         9 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~~g~~G~~P~~yv~~~   64 (67)
T 1aww_A            9 KKVVALYDYMPMNANDLQLRKGDEYFILEESN--LPWWRARDKNGQEGYIPSNYVTEA   64 (67)
T ss_dssp             CEEEBSSCCCCSSSSSCCCCSSCEEECCCCCS--SSEECCBCTTSCBCCEETTTBCCS
T ss_pred             eEEEECccCCCCCCCCccCCCCCEEEEEEccC--CCcEEEEECCCCEEEEchHhEEEc
Confidence            46899999999999999999999999998765  6899998 6799999999999975

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.37  E-value=7.4e-13  Score=93.23  Aligned_cols=56  Identities=14%  Similarity=0.289  Sum_probs=50.1

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWGNFR  253 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVeE~~  253 (272)
                      .++|+|||.+...+||+|++||+|.|+.+.++ .|||.++.. |+.|+||++||+++.
T Consensus         9 ~~~alydy~~~~~~eLs~~~Gd~i~vl~~~~~-~gW~~~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2ct4_A            9 HCVAIYHFEGSSEGTISMAEGEDLSLMEEDKG-DGWTRVRRKEGGEGYVPTSYLRVTS   65 (70)
T ss_dssp             EEEESSCBCCCSTTCCCBCTTCEEEEEECCSS-SCEEEEECSSSCEEEEEGGGEEECC
T ss_pred             EEEEcccCCCCCCCcCCCCCCCEEEEEeccCC-CCeEEEEeCCCCEEEEEhHHeEEcC
Confidence            58999999999999999999999999987543 579999988 999999999998653

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A

Probab=99.36  E-value=3.6e-13  Score=99.76  Aligned_cols=61  Identities=18%  Similarity=0.178  Sum_probs=50.4

Q ss_pred             eeeeeeeeccCCCCCCCCCccCCCcEEEEeee-------------eCCcCCeEEEEe--CCeeeeeeccchhhhhh
Q psy3210         194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSK-------------EGEQKGWWKGKI--DERVSYFFQLYWGNFRL  254 (272)
Q Consensus       194 ~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k-------------~ge~~gwW~G~~--~g~~G~fP~~yVeE~~~  254 (272)
                      ....++|+|||.+...+||+|.+||+|.|+.+             .+++.|||.|+.  +|+.|+||++||+++..
T Consensus        10 ~~~~~~Alydy~a~~~~ELsf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW~~G~~~~~g~~G~fP~nyVe~i~~   85 (90)
T 3o5z_A           10 EGFQYRALYPFRRERPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNERTRQRGDFPGTYVEFLGP   85 (90)
T ss_dssp             SEEEEEECSCBCCCSTTBCCBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCEEEEEETTTCCEEEEEGGGEEEEEE
T ss_pred             CCcEEEEeeeECCCCCCccCCcCCCEEEEEeccccccccccccccCCCCCCceEEEeCCCCCEEEeehHHEEEecc
Confidence            34568999999999999999999999999843             121148999987  58999999999997643

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A

Probab=99.36  E-value=8.3e-13  Score=98.02  Aligned_cols=60  Identities=27%  Similarity=0.541  Sum_probs=52.4

Q ss_pred             eeeeeeeeccCCCCCCC-CCccCCCcEEEEeeeeCC---cCCeEEEEe-CCeeeeeeccchhhhh
Q psy3210         194 RQIIAVAEFDFCPTEAN-QLPLKQGCQVIVLSKEGE---QKGWWKGKI-DERVSYFFQLYWGNFR  253 (272)
Q Consensus       194 ~~~~~~alydf~~~~~~-ELsl~~Gd~i~v~~k~ge---~~gwW~G~~-~g~~G~fP~~yVeE~~  253 (272)
                      ....++|+|||.+.+.+ ||+|++||+|.|+.+.++   +.|||.|+. +|+.|+||++||+++.
T Consensus        13 ~~~~~~alydy~~~~~~~eLsf~~Gd~i~v~~~~~~~~~~~gWw~g~~~~g~~G~~P~~yv~~~~   77 (92)
T 1jqq_A           13 KLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIK   77 (92)
T ss_dssp             TCEEEEESSBBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEEETTSCEEEEEGGGEEECC
T ss_pred             cCEEEEECccCCCCCCCCCcCCCCCCEEEEEECCCCCCCCCCCeEEEeCCCCEEEEehHHeEECC
Confidence            34568999999999999 999999999999988763   138999998 7999999999999764

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A

Probab=99.36  E-value=1.2e-12  Score=95.90  Aligned_cols=58  Identities=29%  Similarity=0.601  Sum_probs=51.8

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~~~m  255 (272)
                      ...++|+|||.+.+.+||+|++||+|.|+.+.+   |||.|+.  +|+.|+||++||++++.+
T Consensus        25 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~---~Ww~g~~~~~g~~G~~P~~yv~~~~~~   84 (86)
T 2oi3_A           25 DIIVVALYDYEAIHHEDLSFQKGDQMVVLEESG---EWWKARSLATRKEGYIPSNYVARVDSL   84 (86)
T ss_dssp             SEEEEESSCCCCSSSSCCCCCTTCEEEEEEESS---SEEEEEETTTCCEEEEEGGGEEEGGGC
T ss_pred             CcEEEECccCCCCCCCcCcCCCCCEEEEEEcCC---CeEEEEECCCCCEEEEehHHcEEcccC
Confidence            357899999999999999999999999998763   7999999  899999999999987543

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.36  E-value=8.7e-13  Score=95.71  Aligned_cols=57  Identities=12%  Similarity=0.218  Sum_probs=50.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+.++ .+||+|+.  +|+.|+||++||++..
T Consensus        18 ~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~   76 (81)
T 1x6g_A           18 TQCITKCEHTRPKPGELAFRKGDVVTILEACEN-KSWYRVKHHTSGQEGLLAAGALRERS   76 (81)
T ss_dssp             CEEEESSCBSSCCTTCCCBCTTCEEEEEECCCS-SSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CEEEECCCCCcCCCCCCCCCCCCEEEEEeccCC-CCeEEEEeCCCCCEEEEehHHEEEcc
Confidence            458999999999999999999999999987653 48999986  5899999999999754

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.35  E-value=7.5e-13  Score=94.95  Aligned_cols=57  Identities=21%  Similarity=0.294  Sum_probs=50.4

Q ss_pred             eeeeeeccCCCC-CCCCCccCCCcEEEEeeeeCCcCCeEEEE-eCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPT-EANQLPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~-~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~-~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+. +.+||+|.+||+|.|+.+..+ .|||.|+ .+|+.|+||++||+++.
T Consensus        10 ~~~~al~dy~~~~~~~eLs~~~Gd~i~v~~~~~~-~gW~~g~~~~g~~G~~P~~yv~~~~   68 (77)
T 2enm_A           10 TKARVMYDFAAEPGNNELTVTEGEIITVTNPNVG-GGWLEGKNNKGEQGLVPTDYVEILP   68 (77)
T ss_dssp             EEEEESSCCCCCTTSSBCCCCTTCEEEEEESCCS-SSEEEEECTTCCEEEEETTTEEEEC
T ss_pred             cEEEECccCCCCCCCCeecCCCCCEEEEeEccCC-CCeEEEEECCCCEEEeehHHeEECC
Confidence            468999999999 999999999999999987422 6899999 78999999999999764

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=1.1e-12  Score=97.76  Aligned_cols=60  Identities=15%  Similarity=0.259  Sum_probs=51.6

Q ss_pred             eeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCc--CCeEEEE--eCCeeeeeeccchhhhh
Q psy3210         194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQ--KGWWKGK--IDERVSYFFQLYWGNFR  253 (272)
Q Consensus       194 ~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~--~gwW~G~--~~g~~G~fP~~yVeE~~  253 (272)
                      ....++|+|||.+...+||+|++||+|.|+.+....  .|||+|+  .+|+.|+||++||+++.
T Consensus        15 ~~~~~~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~   78 (94)
T 2e5k_A           15 NHETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKAD   78 (94)
T ss_dssp             CCEEEEECSCBCCSSSSBCCBCTTCEEEECGGGCCSTTTTEEEEEESSSCCEEEEEGGGEEECC
T ss_pred             CCeEEEECCcCCCCCCCCcCCCCCCEEEEEECcCCCCCCCcEEEEECCCCCEEEechHHeEEcc
Confidence            345789999999999999999999999999874211  5899999  67999999999999764

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A

Probab=99.34  E-value=1.8e-13  Score=96.72  Aligned_cols=58  Identities=19%  Similarity=0.436  Sum_probs=51.4

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeee-eeeccchhhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVS-YFFQLYWGNFRL  254 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G-~fP~~yVeE~~~  254 (272)
                      ...++|+|||.+...+||+|.+||+|.|+.+.+  .|||.|+.+++.| +||++||+++..
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~gG~~P~~yv~~~~~   64 (71)
T 1hsq_A            6 KCAVKALFDYKAQREDELTFIKSAIIQNVEKQE--GGWWRGDYGGKKQLWFPSNYVEEMVN   64 (71)
T ss_dssp             SSCCCCSSCCCCSSSSSCCCCTTCCCBSCCCBT--TTEECCBCSSSCSCCEETTTCCSCSC
T ss_pred             CeEEEECCCCCcCCCCccCCCCCCEEEEEEecC--CCEEEEEECCeEEeEEChHHcEECCC
Confidence            346899999999999999999999999998865  6899999998876 999999997654

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=1e-12  Score=92.01  Aligned_cols=55  Identities=24%  Similarity=0.401  Sum_probs=49.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+ +  .+||.++. +|+.|+||++||+++.
T Consensus         8 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~--~~Ww~~~~~~g~~G~~P~~yv~~~~   63 (68)
T 1wxb_A            8 KYVKILYDFTARNANELSVLKDEVLEVLED-G--RQWWKLRSRSGQAGYVPCNILGEAS   63 (68)
T ss_dssp             CCEECSSCBCCSSSSBCCBCTTCEEEEEEC-S--SSEEEEECTTSCEEEEETTTCCBCC
T ss_pred             EEEEECccCCCCCCCccCCCCCCEEEEEEc-C--CCEEEEEECCCCEEEEEHHHeEECC
Confidence            468999999999999999999999999976 3  58999995 7999999999999764

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}

Probab=99.33  E-value=1.4e-12  Score=95.65  Aligned_cols=53  Identities=23%  Similarity=0.562  Sum_probs=48.3

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGN  251 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE  251 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+.+ +  .|||.|+. +|+.|+||++||++
T Consensus        32 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~--~~Ww~g~~~~g~~G~~P~~yv~~   85 (86)
T 2jxb_A           32 VIVIAKWDYTAQQDQELDIKKNERLWLLDD-S--KTWWRVRNAANRTGYVPSNYVER   85 (86)
T ss_dssp             EEEEESSCCCCCSSSBCCCCTTEEEEEEEC-C--SSEEEEECTTSCEEEEEGGGBCC
T ss_pred             eEEEECccCCCCCCCEeccCCCCEEEEEec-C--CCeEEEEECCCCEEEeehHHEEe
Confidence            568999999999999999999999999987 3  58999994 79999999999985

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A

Probab=99.32  E-value=1.5e-12  Score=91.17  Aligned_cols=56  Identities=20%  Similarity=0.352  Sum_probs=49.5

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+.+.   .+||.++. +|+.|+||++||+++.
T Consensus         8 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~---~~Ww~~~~~~g~~G~~P~~yv~~~~   64 (68)
T 2k2m_A            8 LKWVLCNYDFQARNSSELSVKQRDVLEVLDDS---RKWWKVRDPAGQEGYVPYNILTPYP   64 (68)
T ss_dssp             CCEEEESSCBCCCSSSBCCBCTTCEEEEEECS---SSEEEEECTTSCCEEEEGGGEEECC
T ss_pred             CEEEEECccCCCCCCCcccCCCCCEEEEEEcC---CCeEEEEeCCCCEEEEEhhhEEEcC
Confidence            34689999999999999999999999999873   57999975 5899999999999764

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}

Probab=99.32  E-value=1.9e-12  Score=100.77  Aligned_cols=55  Identities=22%  Similarity=0.271  Sum_probs=49.9

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe---CCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI---DERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~---~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.   .|||+|+.   +|+.|+||++||+..+
T Consensus        60 ~~~~Alydy~a~~~~eLsf~~Gd~i~vl~~~---~gWw~g~~~~~~g~~G~fP~nyV~~~~  117 (119)
T 2rqr_A           60 RHGVAIYNFQGSGAPQLSLQIGDVVRIQETC---GDWYRGYLIKHKMLQGIFPKSFIHIKE  117 (119)
T ss_dssp             EEEEBCSCBCCCSTTBCCBCTTCEEEEEEEE---TTEEEEEESSCTTCEEEEEGGGBCCCC
T ss_pred             eEEEEccccCCCCCCcccCcCCCEEEEEEcC---CCEEEEEECCCCCCEEEeChhHEEEec
Confidence            4689999999999999999999999999874   47999999   8999999999998654

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.32  E-value=2.4e-12  Score=92.94  Aligned_cols=55  Identities=20%  Similarity=0.323  Sum_probs=48.8

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+.+.+||+|++||+|.|+++ +  .+||.++..  |+.|+||++||+++
T Consensus        17 ~~~~~Alydy~a~~~~eLs~~~Gd~i~v~~~-~--~~Ww~~~~~~~g~~G~~P~~yv~~~   73 (79)
T 2cud_A           17 SDFLAVLSDYPSPDISPPIFRRGEKLRVISD-E--GGWWKAISLSTGRESYIPGICVARV   73 (79)
T ss_dssp             CCEEEESSCSSCTTTSCCSSCTTCEEEEEEE-E--TTEEEEEETTTCCEEEEEGGGEEEE
T ss_pred             CeEEEEccCCCCCCCCcCCCCCCCEEEEEec-C--CCeEEEEECCCCCEEEeeHHHeEEc
Confidence            4568999999999999999999999999974 3  579999974  89999999999865

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}

Probab=99.31  E-value=2e-12  Score=103.70  Aligned_cols=57  Identities=35%  Similarity=0.743  Sum_probs=51.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+.+.++ .|||.|+.+|+.|+||++||+++.
T Consensus         6 ~~~~Alydy~a~~~~ELsf~~Gd~i~Vl~~~~~-~gWw~g~~~g~~G~fP~~yv~~~~   62 (142)
T 2kbt_A            6 GTAKARYDFCARDRSELSLKEGDIIKILNKKGQ-QGWWRGEIYGRIGWFPSNYVEEDY   62 (142)
T ss_dssp             CEEEESSCCCCSSSSBCCCCTTCEEEEEECCCS-SSEEEEEETTEEEEEETTSEEESS
T ss_pred             eEEEECCccCCCCCCcCCCCCCCEEEEEEecCC-CCeEEEEECCeeEEechHHEEEcc
Confidence            468999999999999999999999999987532 689999999999999999999753

>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}

Probab=99.31  E-value=1.4e-12  Score=92.64  Aligned_cols=55  Identities=24%  Similarity=0.405  Sum_probs=49.4

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe---CCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI---DERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~---~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+.+.   .|||+|+.   +|+.|+||++||+..
T Consensus        11 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~---~~W~~g~~~~~~g~~G~~P~~yv~~~   68 (74)
T 2m0y_A           11 EKYGVAFYNYDARGADELSLQIGDTVHILETY---EGWYRGYTLRKKSKKGIFPASYIHLK   68 (74)
T ss_dssp             CSCEEECSEECCCSSSBCCEETTEEEEEEEBS---SSCEEEEESSCSSCCEEECGGGEEEC
T ss_pred             CeEEEEceeeCCCCcCcccCCCCCEEEEEEcC---CCeEEEEECCCCCCEEEEehHHEEEe
Confidence            45789999999999999999999999999873   57999998   699999999999854

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.30  E-value=2.2e-12  Score=94.41  Aligned_cols=56  Identities=16%  Similarity=0.407  Sum_probs=50.5

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE-eCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~-~~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+...+||+|++||+|.|+.+.+  .+||.|+ .+|+.|+||++||+++
T Consensus        19 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~~~~~~g~~G~~P~~yv~~~   75 (85)
T 2yuq_A           19 ETVVIALYDYQTNDPQELALRRNEEYCLLDSSE--IHWWRVQDRNGHEGYVPSSYLVEK   75 (85)
T ss_dssp             SCEEEESSCCCCSCSSBCCCCBTEEEEEEECCS--SSEEEEECSSSCEEEEETTTCEEC
T ss_pred             CeEEEECcCCCCCCCCcCCCCCCCEEEEEEecC--CCeEEEEECCCCEEEEehHHeEEc
Confidence            346899999999999999999999999998776  6899997 5799999999999975

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=99.30  E-value=2.4e-12  Score=95.07  Aligned_cols=58  Identities=26%  Similarity=0.521  Sum_probs=50.5

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhhhhhc
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNFRLLS  256 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~~~mk  256 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+.+ +  .|||.|+.  +|+.|+||++||+++....
T Consensus         4 ~~~~Alydy~~~~~~eLs~~~Gd~i~v~~~-~--~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~   63 (90)
T 3reb_B            4 IIVVALYDYVSWSPDDLSFQKGDQMVVLEE-S--GEWWKARSLATRKEGYIPSNYVARVDSGG   63 (90)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEEC-S--SSEEEEEETTTCCEEEEEGGGEEEECC--
T ss_pred             EEEEECCccCcCCcCcCCCCCCCEEEEEEe-C--CCEEEEEECCCCCEEEEehhheEECCCCC
Confidence            468999999999999999999999999987 3  47999998  7999999999999875543

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}

Probab=99.30  E-value=2.4e-12  Score=90.66  Aligned_cols=54  Identities=15%  Similarity=0.274  Sum_probs=47.0

Q ss_pred             eeeeeccCCCCCCC--CCccCCCcEEEEeeeeCCcCCeEEEE-eCCeeeeeeccchhhhh
Q psy3210         197 IAVAEFDFCPTEAN--QLPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYFFQLYWGNFR  253 (272)
Q Consensus       197 ~~~alydf~~~~~~--ELsl~~Gd~i~v~~k~ge~~gwW~G~-~~g~~G~fP~~yVeE~~  253 (272)
                      .++|+|||.+...+  ||+|++||+|.|+.+ +  .|||.|+ .+|+.|+||++||+.+.
T Consensus         7 ~~~alydy~~~~~~~~eLsf~~Gd~i~v~~~-~--~~Ww~g~~~~g~~G~~P~~yv~~~~   63 (70)
T 2vkn_A            7 KAKALYPYDADDDDAYEISFEQNEILQVSDI-E--GRWWKARRANGETGIIPSNYVQLID   63 (70)
T ss_dssp             EEEESSCBCCCSSSTTBCCBCTTCEEEEECT-T--SSEEEEECTTSCEEEEEGGGEEEEE
T ss_pred             EEEECccCCCCCCCCCcccCCCCCEEEEEEc-C--CCeEEEEECCCCEEEEehHHEEECC
Confidence            58999999998655  999999999999975 3  6899997 57999999999998654

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B

Probab=99.30  E-value=1.2e-12  Score=101.40  Aligned_cols=56  Identities=23%  Similarity=0.451  Sum_probs=49.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEee-----eeCCcCCeEEEEeC----------Ceeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLS-----KEGEQKGWWKGKID----------ERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~-----k~ge~~gwW~G~~~----------g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.     +.+  .|||+|+..          |+.|+||++||++++
T Consensus        45 ~~~~Alydy~a~~~dELsf~~GDiI~Vl~~~~~~~~~--~gWw~G~~~~t~~~~~~~~g~~G~fPsnyV~~l~  115 (115)
T 1bb9_A           45 FKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQD--EGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ  115 (115)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEECCSCGGGCC--TTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEEC
T ss_pred             eEEEECCccCCCCCCccCcCCCCEEEEeeccCCcccC--CCeEEEEeCCCcccccccCCCEEEechHHEEECc
Confidence            46899999999999999999999999998     444  789999763          789999999999753

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.29  E-value=1.4e-12  Score=97.97  Aligned_cols=56  Identities=21%  Similarity=0.508  Sum_probs=50.9

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+++
T Consensus        34 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~   89 (98)
T 1udl_A           34 VCQVIAMYDYAANNEDELSFSKGQLINVMNKDD--PDWWQGEINGVTGLFPSNYVKMT   89 (98)
T ss_dssp             SEEEEESSCCCCSSTTSCCCCTTCEEEECBCCS--SSEEBCBSSSCBCCEETTSEEEC
T ss_pred             ceEEEECCCCCCCCCCccCCcCCCEEEEEEecC--CCEEEEEECCcEEEEehHHeEEc
Confidence            346899999999999999999999999998765  68999999999999999999865

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}

Probab=99.29  E-value=1.3e-12  Score=97.16  Aligned_cols=60  Identities=20%  Similarity=0.396  Sum_probs=51.7

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCC--cCCeEEEEeCCe-eeeeeccchhhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGE--QKGWWKGKIDER-VSYFFQLYWGNFRL  254 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge--~~gwW~G~~~g~-~G~fP~~yVeE~~~  254 (272)
                      ...++|+|||.+...+||+|++||+|.|+.+.++  +.|||.|+..++ .|+||++||+++..
T Consensus        17 ~~~~~alydy~a~~~~eLsf~~Gd~i~v~~~~~~~~~~gWw~g~~~~~~~G~~P~~yv~~~~~   79 (93)
T 1wxu_A           17 HVVARAEYDFVAVSDEEISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKILGK   79 (93)
T ss_dssp             BBCEEESSCBCCSSSSBCCBCSSCBCEECCTTTSCSCSSCEEEESSSSSCEEECSTTEEECCC
T ss_pred             CEEEEECccCCCCCCCccCcCCCCEEEEEECCCCCCCCCcEEEEeCCcCEEEEehHHEEEcCC
Confidence            3468999999999999999999999999987652  148999998887 99999999997643

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A

Probab=99.28  E-value=1.5e-12  Score=94.84  Aligned_cols=59  Identities=19%  Similarity=0.206  Sum_probs=49.0

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeee-------------CCcCCeEEEEe--CCeeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKE-------------GEQKGWWKGKI--DERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~-------------ge~~gwW~G~~--~g~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+++.             .++.|||+|+.  +|+.|+||++||+++.
T Consensus         5 ~~~~~Alydy~~~~~~eLs~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~~~~~g~~G~fP~~yV~~~~   78 (83)
T 3i5r_A            5 GYQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIG   78 (83)
T ss_dssp             EEEEEECSCBCCCSTTBCCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEE
T ss_pred             CcEEEEccccCCCCCCccccCCCCEEEEeeccccccccccccccCCCCCccEEEEeCCCCCEEEEehHHEEECC
Confidence            34689999999999999999999999999641             11148999965  5899999999999764

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A

Probab=99.27  E-value=3.8e-13  Score=96.59  Aligned_cols=55  Identities=16%  Similarity=0.357  Sum_probs=49.7

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+++.+  .|||.|+. +|+.|+||++||++.
T Consensus        21 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~~~~~~g~~G~~P~~yv~~~   76 (77)
T 1awj_A           21 TLVIALYDYQTNDPQELALRCDEEYYLLDSSE--IHWWRVQDKNGHEGYAPSSYLVEK   76 (77)
T ss_dssp             SCCCCCCCBCCCCTTSCCBCSSSCCSCCCTTS--SSBCCCCCSSSCCCCCBSTTCCCC
T ss_pred             eEEEECccCCCCCcCCcCCCCCCEEEEEEecC--CCCEEEEECCCCEEEEehHHEEEc
Confidence            46899999999999999999999999998765  68999996 799999999999863

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}

Probab=99.26  E-value=4.8e-12  Score=96.73  Aligned_cols=58  Identities=19%  Similarity=0.391  Sum_probs=51.7

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNFRL  254 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~~~  254 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.  +|+.|+||++||+++..
T Consensus        27 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~~~g~~G~~P~~yv~~~~~   86 (109)
T 2yt6_A           27 VTIFVALYDYEARTTEDLSFKKGERFQIINNTE--GDWWEARSIATGKSGYIPSNYVVPADS   86 (109)
T ss_dssp             CCEEEESSCCCCSSTTSCCCCTTCEEEEEECSC--TTCEEEEESSSCCEEEECTTTEEESSS
T ss_pred             CEEEEECccCCCCCCCccCCCCCCEEEEEEccC--CCcEEEEECCCCCEEEechHHcEECCc
Confidence            356899999999999999999999999998775  68999996  79999999999997643

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}

Probab=99.24  E-value=6.3e-12  Score=97.97  Aligned_cols=55  Identities=15%  Similarity=0.198  Sum_probs=49.7

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe---CCeeeeeeccchhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI---DERVSYFFQLYWGNFR  253 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~---~g~~G~fP~~yVeE~~  253 (272)
                      .++|+|||.+.+.+||+|++||+|.|+.+.+  .|||.|+.   .|+.|+||++||+.+.
T Consensus         5 ~~~Alydy~a~~~~ELsf~~Gd~i~vl~~~~--~~Ww~g~~~~~~g~~G~~P~nyv~~~~   62 (120)
T 2kym_A            5 FAVTLYEFKAERDDELDVSPGENLSICAHYD--YEWFIAKPINRLGGPGLVPVSYVRIID   62 (120)
T ss_dssp             EEEECSCBCCCSTTCCCBCTTCEEEEEEEET--TTEEEEEESSSCSCCCCEEGGGEEEEC
T ss_pred             EEEEcccCCCCCCCccCCCCCCEEEEEEecC--CCEEEEEECCCCCCEEEEchHHEEEcc
Confidence            5889999999999999999999999999876  68999986   4788999999998764

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.22  E-value=1.2e-11  Score=88.87  Aligned_cols=55  Identities=22%  Similarity=0.398  Sum_probs=45.1

Q ss_pred             eeeeeccCCCCC---CCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTE---ANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~---~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~  252 (272)
                      .+.++|+|.+.+   .+||+|++||+|+|+.+..+ .|||+|+.  +|+.|+||++||+++
T Consensus        17 ~~~a~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~-~gWw~g~~~~~g~~G~fP~nyV~~~   76 (78)
T 1k1z_A           17 VFQEYYGIPPPPGAFGGFLRLNPGDIVELTKAEAE-HNWWEGRNTATNEVGWFPCNRVHPY   76 (78)
T ss_dssp             ECSCBSSCSCCSSSSCCCCCBCTTCEEEEEECCSS-CSCEEEEETTTTEEEEECSTTEEES
T ss_pred             EEEECCCCCCCCCCCCCccCCCCCCEEEEEEcCCC-CCeEEEEECCCCCEEEEehHHeEEC
Confidence            356777777643   69999999999999988422 68999994  699999999999864

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A

Probab=99.21  E-value=6.2e-12  Score=88.40  Aligned_cols=52  Identities=21%  Similarity=0.263  Sum_probs=41.6

Q ss_pred             eeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE--eCCeeeeeeccchhhh
Q psy3210         200 AEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK--IDERVSYFFQLYWGNF  252 (272)
Q Consensus       200 alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~--~~g~~G~fP~~yVeE~  252 (272)
                      ++++|.+.+.+||+|++||+|+|+.+..+ .|||+|+  .+|+.|+||++||+++
T Consensus        15 ~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~-~~Ww~g~~~~~g~~G~fP~~yv~~~   68 (70)
T 1gcq_C           15 GIPPPPGAFGPFLRLNPGDIVELTKAEAE-HNWWEGRNTATNEVGWFPCNRVHPY   68 (70)
T ss_dssp             SSSCCGGGCSCBCCBCTTCEEEEEECCTT-CSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             ecCCCCCCCCCcCCcCCCCEEEEEeCCCC-CCCeEEEeCCCCCEeEeehHHeEEC
Confidence            44455555667999999999999987432 6899995  5699999999999864

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.20  E-value=8.7e-12  Score=106.17  Aligned_cols=55  Identities=24%  Similarity=0.450  Sum_probs=49.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEee-----eeCCcCCeEEEEe----------CCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLS-----KEGEQKGWWKGKI----------DERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~-----k~ge~~gwW~G~~----------~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.     +.+  .|||.|+.          +|+.||||++||+.+
T Consensus       143 ~~~rALYdY~a~~~dELSf~~GDiI~Vl~~~~~~~~d--dgWw~G~~~~t~~~~~d~~G~~G~FPsnYVe~l  212 (213)
T 1mv3_A          143 FKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQD--EGWLMGVKESDWNQHKKLEKCRGVFPENFTERV  212 (213)
T ss_dssp             EEEEESSCBCCCSTTCCCBCSSCEEEECCCSCGGGSC--TTEEEEEEHHHHHTGGGGGGTCEEEESTTEEEE
T ss_pred             eEEEECCCcCCCCCCcCCcCCCCEEEEeecCCCCccC--CCeeEEEeCCcccccccCCCCEEEecHHHeEEC
Confidence            46899999999999999999999999998     444  78999996          489999999999865

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.13  E-value=5.1e-11  Score=98.57  Aligned_cols=60  Identities=17%  Similarity=0.400  Sum_probs=51.2

Q ss_pred             ceeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhhhhh
Q psy3210         193 FRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       193 ~~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~~~m  255 (272)
                      .....++|+|||.+.+.+||+|.+||+|.|+++ +  .+||+|+.  +|+.|+||++||+++..+
T Consensus        10 ~~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~--~~Ww~~~~~~~g~~G~vP~~yv~~~~~l   71 (175)
T 4d8k_A           10 LQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQ-S--GEWWKAQSLTTGQEGFIPFNFVAKANSL   71 (175)
T ss_dssp             ---CEEEESSCBCCCSSSBCCBCTTCEEEEEEC-C--SSEEEEEETTTCCEEEEEGGGEEETTCS
T ss_pred             CCCcEEEEccCcCCcCCcccccccCCEEEEEcc-C--CCEEEEEECCCCceeeeccccccccccc
Confidence            344579999999999999999999999999988 3  58999998  799999999999976443

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=99.13  E-value=5.7e-11  Score=99.90  Aligned_cols=57  Identities=26%  Similarity=0.402  Sum_probs=51.6

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+...+||+|.+||+|.|+.+.+  .|||.|+.+|+.||||++||+++.
T Consensus        81 ~~~~~al~dy~a~~~~eLs~~~Gd~i~vl~~~~--~gWw~g~~~g~~G~~P~~yv~~~~  137 (193)
T 1ng2_A           81 GEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLL--DGWWVIRKDDVTGYFPSMYLQKSG  137 (193)
T ss_dssp             CEEEEESSCBCCCSTTBCCBCTTCEEEEEECCT--TSEEEEEETTEEEEEEGGGEEETT
T ss_pred             ceeeeeccccCCCCCCcccccCCCEEEEEEecC--CCeEEEEECCCEEEEehHHeEECC
Confidence            346889999999999999999999999998865  689999999999999999998653

>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A

Probab=99.12  E-value=6.3e-11  Score=104.67  Aligned_cols=56  Identities=25%  Similarity=0.535  Sum_probs=51.5

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+++.+  .|||.|+.+|+.|+||++||+++.
T Consensus         3 ~~~~a~~~~~~~~~~el~~~~gd~i~v~~~~~--~~w~~~~~~g~~G~~P~~~v~~~~   58 (283)
T 3jv3_A            3 CQVIGMYDYTAQNDDELAFSKGQIINVLNKED--PDWWKGEVSGQVGLFPSNYVKLTT   58 (283)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEECCS--TTEEEEEETTEEEEEEGGGEEEGG
T ss_pred             eEEEEccccCCCCCCcCCCCCCCEEEEEecCC--CCEEEEEECCCCCcCCCccccccC
Confidence            36899999999999999999999999998876  689999999999999999998654

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=99.09  E-value=5.9e-11  Score=99.82  Aligned_cols=59  Identities=19%  Similarity=0.302  Sum_probs=52.7

Q ss_pred             eeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       194 ~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ....++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.+|+.||||++||+++..
T Consensus        10 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~--~gWw~g~~~g~~G~~P~~yv~~~~~   68 (193)
T 1ng2_A           10 ILQTYRAIADYEKTSGSEMALSTGDVVEVVEKSE--SGWWFCQMKAKRGWIPASFLEPLDS   68 (193)
T ss_dssp             CCEEEECSSCBCCSSTTCCCBCTTCEEEEEECCT--TSCCEEEECCCCCCCCGGGCCCSSC
T ss_pred             cCcEEEEcCCcCCCCCCcCCCCCCCEEEEEEecC--CCeEEEEECCeeeEechheEEeecc
Confidence            3456899999999999999999999999998766  6899999999999999999997543

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=99.06  E-value=3.2e-10  Score=93.99  Aligned_cols=82  Identities=22%  Similarity=0.359  Sum_probs=68.3

Q ss_pred             CcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEee-CCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          84 NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKT-DEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~-~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      ..-.+|||+ +++..|||++|... +|+||||.|++      ++.++||++. ++.++|+.|.+.+.    .|.+++. .
T Consensus        10 R~I~HP~F~-n~s~~qAe~~L~~~-~G~~liRPSsk------~~~ltit~Kv~d~~~~Hi~I~E~~k----~l~ig~~-~   76 (178)
T 2xp1_A           10 RFYKHPLFK-NFNVTESENYLRSS-TDDFLIRKGSR------HGYCVLVIKFASDVFVHMKIEEHSE----HYTCSNK-H   76 (178)
T ss_dssp             GGGGSTTEE-CCCHHHHHHHHHHS-SCCEEEEECSS------TTEEEEEEEEETTEEEEEEEEECSS----CEEETTE-E
T ss_pred             eeccCCCcC-CCCHHHHHHHHhcC-CCCEEEeecCC------CCcEEEEEEECCCcEEEEEEEECCC----EEEECCc-E
Confidence            345679999 79999999999885 59999999963      3679999996 78999999987654    5777766 6


Q ss_pred             cchhhhhhhhhhccccc
Q psy3210         163 FRSIVELICCYERNSLI  179 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~  179 (272)
                      |.+|.|||.+|.. ++.
T Consensus        77 fedLDElI~~yv~-pm~   92 (178)
T 2xp1_A           77 FEDIDEVISVYVR-PIL   92 (178)
T ss_dssp             ESSHHHHHHHTHH-HHH
T ss_pred             ECCHHHHHHHHHH-HHH
Confidence            9999999999977 543

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.06  E-value=7.4e-11  Score=105.98  Aligned_cols=56  Identities=20%  Similarity=0.147  Sum_probs=50.8

Q ss_pred             eeeeeeccCC--CCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFC--PTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~--~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.  +.+.+||+|.+||+|.|+.+.+  .|||.|+.+|+.||||++||+++.
T Consensus       238 ~~~~al~d~~~~a~~~~eL~~~~Gd~i~v~~~~~--~gWw~g~~~g~~G~fP~~yv~~~~  295 (304)
T 2eyz_A          238 IYARVIQKRVPNAYDKTALALEVGELVKVTKINV--SGQWEGECNGKRGHFPFTHVRLLD  295 (304)
T ss_dssp             CCSCCSSCBCCCTTCSSCCCBCTTSCCEEEEECT--TSCEEEEETTEEEECCCTTSCCCS
T ss_pred             EEEEEeeeecCCCCCCCeecccCCCEEEEEEecC--CCeEEEEECCceEEechHHEEECC
Confidence            3588999999  6789999999999999998766  689999999999999999999764

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=99.04  E-value=1.9e-10  Score=104.87  Aligned_cols=57  Identities=25%  Similarity=0.339  Sum_probs=52.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+.+.+  .|||+|+.+|+.|+||++||+++..
T Consensus       175 ~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~~  231 (341)
T 2dyb_A          175 PRAEALFDFTGNSKLELNFKAGDVIFLLSRIN--KDWLEGTVRGATGIFPLSFVKILKD  231 (341)
T ss_dssp             CEEEESSCBCCSSSSBCCBCTTCEEEEEEECS--SSEEEEEETTEEEEEEGGGEEEEEC
T ss_pred             cEEEEEEeeCCCCCCcCCccCCCEEEEEEecC--CCEEEEEECCcEEEechHHeEEcCC
Confidence            45899999999999999999999999998866  6899999999999999999997654

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1

Probab=99.02  E-value=3.2e-10  Score=78.03  Aligned_cols=45  Identities=20%  Similarity=0.516  Sum_probs=40.3

Q ss_pred             CCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         208 EANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       208 ~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      +.+||+|.+||+|.|+.+.+  .+||.|+.+|+.|+||++||+++..
T Consensus         2 ~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~~   46 (63)
T 1tuc_A            2 GPREVTMKKGDILTLLNSTN--KDWWKVEVNDRQGFVPAAYVKKLDS   46 (63)
T ss_dssp             CCCCCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEEECSC
T ss_pred             CccccCCCCCCEEEEEEecC--CCEEEEEECCcEEEEeHHHEEEcCC
Confidence            46899999999999998776  6899999999999999999997643

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}

Probab=99.00  E-value=2.7e-10  Score=95.14  Aligned_cols=56  Identities=23%  Similarity=0.322  Sum_probs=50.0

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe---CCeeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI---DERVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~---~g~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||.+...+||+|.+||+|.|+.+.+   |||+|+.   +|+.|+||++||+...
T Consensus        17 ~~~~~Alydf~~~~~~eLs~~~Gd~i~v~~~~~---~W~~g~~~~~~g~~G~fP~nyV~~~~   75 (184)
T 3a98_A           17 ERHGVAIYNFQGSGAPQLSLQIGDVVRIQETCG---DWYRGYLIKHKMLQGIFPKSFIHIKE   75 (184)
T ss_dssp             CCEEEESSCBCCSSTTBCCBCTTCEEEEEEEET---TEEEEEETTEEEEEEEEEGGGEEEEC
T ss_pred             ceEEEEeeeeCCCCCCCCCcCCCCEEEEEecCC---CEEEEEEecCCCceEEECcceEEEec
Confidence            346899999999999999999999999998764   5999998   6899999999998654

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=98.96  E-value=5.8e-10  Score=105.52  Aligned_cols=56  Identities=20%  Similarity=0.411  Sum_probs=51.5

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.+|+.||||++||+.+
T Consensus        30 ~~~~~al~~~~~~~~~eL~~~~gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~   85 (466)
T 2pz1_A           30 VVCAEALWDHVTMDDQELGFKAGDVIEVMDATN--REWWWGRVADGEGWFPASFVRLR   85 (466)
T ss_dssp             CEEEEESSCBCCCCTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEEEC
T ss_pred             ccEEEEccccCCCCCCcCCCCCCCEEEEEEecC--CCEEEEEECCcEEEEehhHeeec
Confidence            356899999999999999999999999998876  68999999999999999999864

>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}

Probab=98.96  E-value=1.3e-09  Score=78.28  Aligned_cols=53  Identities=19%  Similarity=0.324  Sum_probs=46.3

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC----Ceeeeeeccch
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID----ERVSYFFQLYW  249 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~----g~~G~fP~~yV  249 (272)
                      ..+|+|||.+...+||+|++||+++|+++..++.+||..+..    ++.|++|+|||
T Consensus        19 ~~valydF~Ar~~~ELS~~kGd~vevle~~~~~peW~lvr~~~~~~~qeGlVPsnyl   75 (82)
T 1u3o_A           19 LTVVLQDFSAAHSSELSIQVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTL   75 (82)
T ss_dssp             EEECSSCBCCCSTTCCCBCTTCEEEESSCTTSSTTEEEEEESSSSSCEEEEEEGGGS
T ss_pred             EEEEEeeecCCCCCeeeEcCCCEEEEEecCCCCCCEEEEEECCCCCCcEeeccccEE
Confidence            378999999999999999999999999876434689999963    37899999999

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=98.94  E-value=5.4e-10  Score=95.17  Aligned_cols=54  Identities=26%  Similarity=0.533  Sum_probs=45.2

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGN  251 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE  251 (272)
                      .++|+|||.+...+||+|++||+|.|+.+.++ .|||+|+.+|+.|+||++||+.
T Consensus         2 ~~~al~~~~~~~~~eLs~~~Gd~i~v~~~~~~-~~W~~~~~~g~~G~~P~~yv~~   55 (217)
T 1gri_A            2 EAIAKYDFKATADDELSFKRGDILKVLNEECD-QNWYKAELNGKDGFIPKNYIEM   55 (217)
T ss_dssp             EEEECSCBCCCSSSCCCBCTTCEEEC-------CCEEEEESSSCEEEEEGGGEEC
T ss_pred             EEEEeeccCCcCCCcCCCCCCCEEEEEeccCC-CCeEeeccCCccceECCccccc
Confidence            47899999999999999999999999987633 6899999999999999999974

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=98.94  E-value=8.1e-10  Score=106.15  Aligned_cols=58  Identities=17%  Similarity=0.375  Sum_probs=52.0

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~~~m  255 (272)
                      ..++|+|||++.+.+||+|++||+|.|+++.+  .|||.|+.  +|+.|+||+|||++.+.+
T Consensus        86 ~~~~alyd~~~~~~~el~~~~gd~i~v~~~~~--~~ww~~~~~~~g~~G~~P~~yv~~~~~l  145 (535)
T 2h8h_A           86 TTFVALYDYESRTETDLSFKKGERLQIVNNTE--GDWWLAHSLSTGQTGYIPSNYVAPSDSI  145 (535)
T ss_dssp             -CEEESSCBCCCSSSBCCBCTTCEEEEEECSS--SSEEEEEETTTCCEEEEEGGGEEETTSG
T ss_pred             cEEEEccccCCcCCCcCCcCCCCEEEEEEecC--CCceEEEECCCCcceEecchhhcccccc
Confidence            35899999999999999999999999998876  68999999  799999999999986544

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=98.94  E-value=3.1e-10  Score=81.26  Aligned_cols=46  Identities=20%  Similarity=0.518  Sum_probs=41.5

Q ss_pred             CCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         206 PTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       206 ~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      +.+.+||+|++||+|.|+.+.+  .|||+|+.+|+.|+||++||+++.
T Consensus         2 a~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~~~   47 (77)
T 2jmc_A            2 AMGPREVTMKKGDILTLLNSTN--KDWWKVEVNDRQGFVPAAYVKKLD   47 (77)
T ss_dssp             CSSSCCCCCCTTCEEECCCCCC--SSCCCEEETTEEECCCGGGEEECC
T ss_pred             CcCCCccCCCCCCEEEEEEecC--CCEEEEEECCcEEEEEeeEEEEcC
Confidence            4678999999999999998876  689999999999999999999764

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=98.94  E-value=6.7e-10  Score=106.52  Aligned_cols=57  Identities=18%  Similarity=0.177  Sum_probs=51.1

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE--eCCeeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK--IDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~--~~g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|||.+++.+||+|++||+|.|+++.+  .|||+|+  .+|+.|+||+|||+++..
T Consensus       443 ~~~~aly~y~a~~~dELs~~~GD~i~v~~~~~--~gW~~G~~~~~g~~G~fPsnyV~~~~~  501 (526)
T 2de0_X          443 HNQIAIYAHQPRTADEIPMEPGDIIGVAGNHW--DGYSKGVNRKLGRTGLYPSYKVREKIE  501 (526)
T ss_dssp             CEEEECSCBCCSSTTBCCBCTTCEEEEEEECS--SSEEEEEETTTTEEEEEEGGGEEECCC
T ss_pred             cceEEeecCCCCCCCcCCcCCCCEEEEccccC--CCeeEEEeCCCCCEEEECchheeEccc
Confidence            45889999999999999999999999998876  6899999  579999999999997543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=98.92  E-value=9.7e-10  Score=103.29  Aligned_cols=56  Identities=18%  Similarity=0.375  Sum_probs=50.9

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNFRL  254 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~~~  254 (272)
                      .++|+|||.+.+.+||+|++||+|.|+++.+  .|||+|+.  +|+.|+||+|||++.+.
T Consensus         4 ~~~al~~~~~~~~~el~~~~gd~~~v~~~~~--~~ww~~~~~~~g~~G~~P~~yv~~~~~   61 (452)
T 1fmk_A            4 TFVALYDYESRTETDLSFKKGERLQIVNNTE--GDWWLAHSLSTGQTGYIPSNYVAPSDS   61 (452)
T ss_dssp             EEEESSCBCCCSSSBCCBCTTCEEEESCCCS--SSEEEEEETTTCCEEEEEGGGEEETTS
T ss_pred             EEEECCccCCCCCCCCCccCCCEEEEeccCC--CCceEEEEcCCCcccccCccccccccc
Confidence            5789999999999999999999999998765  68999999  79999999999987653

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.91  E-value=1.1e-09  Score=102.78  Aligned_cols=58  Identities=19%  Similarity=0.328  Sum_probs=51.5

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+++.++ .+||+|+.. |+.|+||+|||++...
T Consensus        12 ~~~~aly~~~~~~~~el~~~~gd~i~v~~~~~~-~~ww~~~~~~g~~G~~P~~yv~~~~~   70 (450)
T 1k9a_A           12 TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKD-PNWYKAKNKVGREGIIPANYVQKREG   70 (450)
T ss_dssp             CEEEESSCBCCSSSSBCCBCTTCEEEEEEECSS-TTEEEEECTTCCEEEEEGGGEEECCC
T ss_pred             CEEEECCCcCccCCCcCCCCCCCEEEEeeccCC-CCceEEEECCCceeeechhccccccc
Confidence            358999999999999999999999999987433 689999987 9999999999998654

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=98.41  E-value=1.7e-10  Score=103.60  Aligned_cols=56  Identities=25%  Similarity=0.281  Sum_probs=49.6

Q ss_pred             eeeeeeccCCCCC--CCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTE--ANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~--~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.++.  .+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+++.
T Consensus       238 ~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~--~gWw~g~~~g~~G~fP~~yv~~~~  295 (303)
T 2lqn_A          238 VFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNI--NGQWEGEVNGRKGLFPFTHVKIFD  295 (303)
Confidence            4589999997544  7799999999999998866  689999999999999999999764

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=98.87  E-value=2.1e-10  Score=103.18  Aligned_cols=57  Identities=25%  Similarity=0.331  Sum_probs=0.0

Q ss_pred             eeeeeeccC--CCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDF--CPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf--~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|||  .+.+.+||+|.+||+|+|+++..  .|||.|+.+|+.|+||+|||+++..
T Consensus       248 ~~a~alyd~~~~~~~~~ELs~~~Gd~i~v~~~~~--~~ww~g~~~g~~G~fP~~yv~~~~~  306 (308)
T 3qwy_A          248 AKAKVTFDRVPNAYDPTQLRVKKGQTVLVTQKMS--NGMYKAELDGQIGSVPHTYLRFTAV  306 (308)
T ss_dssp             -------------------------------------------------------------
T ss_pred             cccccccccccccCCcccceeCCCCEEEEEEEcC--CCcEEEEECCeeEEechHHeEEecC
Confidence            357899999  55567999999999999998755  5899999999999999999998764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=98.82  E-value=3e-09  Score=99.89  Aligned_cols=57  Identities=28%  Similarity=0.568  Sum_probs=50.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEE--eCCeeeeeeccchhhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK--IDERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~--~~g~~G~fP~~yVeE~~~m  255 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+++ +  .|||+|+  .+|+.|+||+|||++.+.+
T Consensus         9 ~~~~al~~~~~~~~~el~~~~gd~~~v~~~-~--~~W~~~~~~~~g~~G~~P~~yv~~~~~l   67 (454)
T 1qcf_A            9 IIVVALYDYEAIHHEDLSFQKGDQMVVLEE-S--GEWWKARSLATRKEGYIPSNYVARVDSL   67 (454)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEEC-C--TTEEEEEETTTCCEEEEEGGGEEETTCG
T ss_pred             eEEEECcccCCcCCCcCcccCCCEEEEEec-C--CCCeEEEECCCCceEEecchhccccccc
Confidence            358999999999999999999999999987 3  5799999  5799999999999876543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=98.81  E-value=3.9e-09  Score=100.36  Aligned_cols=57  Identities=19%  Similarity=0.332  Sum_probs=51.1

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+.+.+||+|++||+|+|+++..+ .+||.|+.+|+.|+||+|||+++.
T Consensus        44 ~~~~alyd~~~~~~~els~~~gd~~~v~~~~~~-~~w~~~~~~~~~G~~P~~yv~~~~  100 (495)
T 1opk_A           44 NLFVALYDFVASGDNTLSITKGEKLRVLGYNHN-GEWCEAQTKNGQGWVPSNYITPVN  100 (495)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEEECTT-SSEEEEECSSCEEEEEGGGEEESS
T ss_pred             cEEEEeCCcCCCCCCCCCccCCCEEEEeecCCC-CCceeeeecCCcceeccccccccc
Confidence            458999999999999999999999999987633 589999999999999999998653

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=98.78  E-value=8.2e-09  Score=70.52  Aligned_cols=41  Identities=22%  Similarity=0.598  Sum_probs=37.0

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID  238 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~  238 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+.+.+  .+||.|+.+
T Consensus        22 ~~~~alydy~a~~~~eLsf~~Gd~i~v~~~~~--~~Ww~g~~n   62 (62)
T 1g2b_A           22 ELVLALYDYQEKSPREVTMKKGDILTLLNSTN--KDWWKVEVN   62 (62)
T ss_dssp             CEEEECSCBCCSSTTBCCBCTTCEEEEEECCS--SSEEEEEEC
T ss_pred             eEEEEeeeECCCCCCccCCCCCCEEEEEEecC--CCEEEEEeC
Confidence            46899999999999999999999999998865  689999864

>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A

Probab=98.78  E-value=2.7e-09  Score=95.44  Aligned_cols=59  Identities=19%  Similarity=0.287  Sum_probs=50.7

Q ss_pred             eeeeeccCCCCCCC-----CCccCCCcEEEEeeeeCCcCCeEEEEeCC------eeeeeeccchhhhhhhcc
Q psy3210         197 IAVAEFDFCPTEAN-----QLPLKQGCQVIVLSKEGEQKGWWKGKIDE------RVSYFFQLYWGNFRLLSS  257 (272)
Q Consensus       197 ~~~alydf~~~~~~-----ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g------~~G~fP~~yVeE~~~mk~  257 (272)
                      .++|+|||++...+     ||+|++||++.|+++.+  .|||.|+..+      +.|+||++||+|.....+
T Consensus         3 ~vrAlydy~~~~~~~~p~~eLsf~~GDil~V~~~~d--~~WW~a~~~~~~~~~~~~G~iPsny~~e~~~~~~   72 (295)
T 1kjw_A            3 YIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGD--EEWWQARRVHSDSETDDIGFIPSKRRVERREWSR   72 (295)
T ss_dssp             EEEESSCBCHHHHHCCCSSBCCBCTTCEEEEEECCS--SSEEEEEECCSSCCCSCCEEEECHHHHHHHHHTS
T ss_pred             EEEEeeccCCCCCCCCCCcCCcCCCCCEEEEEEeCC--CCeEEEEECCCCCccCceeEeecHHHHHHHHHhh
Confidence            47899999998877     99999999999999866  6899999863      789999999998765443

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}

Probab=98.78  E-value=7.1e-10  Score=105.68  Aligned_cols=57  Identities=26%  Similarity=0.532  Sum_probs=0.0

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+.+.++ .|||.|+.. |+.|+||++||+++
T Consensus       428 ~~~~~alydy~~~~~~eLsf~~Gd~i~vl~~~~~-~~Ww~g~~~~g~~G~~P~nyv~~i  485 (486)
T 3haj_A          428 EVRVRALYDYEGQEHDELSFKAGDELTKMEDEDE-QGWCKGRLDNGQVGLYPANYVEAI  485 (486)
T ss_dssp             -----------------------------------------------------------
T ss_pred             CeEEEEccccCCCCCCcCccCCCCEEEEEEecCC-CCeeEEEeCCCCEEEEeHHHceeC
Confidence            4468999999999999999999999999987643 589999998 99999999999975

>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}

Probab=98.65  E-value=2.9e-08  Score=97.73  Aligned_cols=61  Identities=21%  Similarity=0.184  Sum_probs=48.1

Q ss_pred             eeeeeeccCC---CCCCCCCccCCCcEEEEeeeeCC---cCCeEEEE--eCCeeeeeeccchhhhhhhc
Q psy3210         196 IIAVAEFDFC---PTEANQLPLKQGCQVIVLSKEGE---QKGWWKGK--IDERVSYFFQLYWGNFRLLS  256 (272)
Q Consensus       196 ~~~~alydf~---~~~~~ELsl~~Gd~i~v~~k~ge---~~gwW~G~--~~g~~G~fP~~yVeE~~~mk  256 (272)
                      .+|+|+|||.   +.++++|+|++||+|++..+.++   +.|||.|+  .+|+.|+||++||.-+-.+.
T Consensus       574 ~~~~Al~d~~~~~~~~~~~L~f~kGDlI~l~~~~~~~~~~~~W~~G~~~~~g~~G~fP~~~V~~lptl~  642 (655)
T 3pvl_A          574 KYVVALQDNPNPAGEESGFLSFAKGDLIILDHDTGEQVMNSGWANGINERTKQRGDFPTDCVYVMPTVT  642 (655)
T ss_dssp             CEEEESSCCCC-----CCBCCCCTTCEEEESSCCHHHHHHSSEEEEEETTTCCEEEEEGGGEEECCCSS
T ss_pred             hhhhHHhhcccCCCCCCCcccccCCCEEEEccccCcccCCCCeEEEEeCCCCceEEeEhhhEEECCCCC
Confidence            4799999998   66789999999999999877321   27899999  56999999999998654443

>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=98.47  E-value=1.8e-07  Score=69.53  Aligned_cols=54  Identities=11%  Similarity=0.110  Sum_probs=47.4

Q ss_pred             eeeeeccC--CCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchhhh
Q psy3210         197 IAVAEFDF--CPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf--~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVeE~  252 (272)
                      .++|+|+|  ......||+|++||+++|+.+.+  .+||.++.. |+.|++|.+||+..
T Consensus        41 ~~~a~~~f~~~k~g~~DLpfkkGE~LeVI~~~e--~~wwLcRNs~GkyGyVP~~yl~~~   97 (102)
T 1ri9_A           41 STKVTTSITSKKWGTRDLQVKPGESLEVIQTTD--DTKVLCRNEEGKYGYVLRSYLADN   97 (102)
T ss_dssp             CCBCCTTSCSSCCCTTBCCCCTTCBCEEEEESS--SSEEEEEETTTEEEEEEGGGSCC-
T ss_pred             EEEEeeccccccCCcccCCcCCCCEEEEEEeCC--CCEEEEECCCCCCCceeHHHhccc
Confidence            47788999  77789999999999999998877  589999985 89999999999854

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=98.44  E-value=2.1e-07  Score=79.40  Aligned_cols=57  Identities=23%  Similarity=0.615  Sum_probs=50.8

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCc-CCeEEEEeCCeeeeeeccchhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQ-KGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~-~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      .+.++|+|.+....+|.+.+||+|+++.+.+++ .+||.++.+|+.|+||.+||+...
T Consensus       172 ~~~al~d~~~~~~~eLa~~~G~~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~~~~  229 (239)
T 1ycs_B          172 VIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLYP  229 (239)
T ss_dssp             EEEESSCBCCSSTTBCCBCSSCEEEECCCCTTSCSSEEEEEETTEEEEEEGGGEECCC
T ss_pred             eEEEEeccCCCCCCcccccCCCEEEEEEecCCCCCCEEEEEECCcEEEeehHHeeECC
Confidence            467899999999999999999999999887653 469999999999999999999653

>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A

Probab=98.34  E-value=4.5e-07  Score=81.88  Aligned_cols=53  Identities=9%  Similarity=0.256  Sum_probs=45.6

Q ss_pred             eeeeeeccCCCCCCC-------CCccCCCcEEEEeeeeCCcCCeEEEEe---CCeeeeeeccchh
Q psy3210         196 IIAVAEFDFCPTEAN-------QLPLKQGCQVIVLSKEGEQKGWWKGKI---DERVSYFFQLYWG  250 (272)
Q Consensus       196 ~~~~alydf~~~~~~-------ELsl~~Gd~i~v~~k~ge~~gwW~G~~---~g~~G~fP~~yVe  250 (272)
                      ..++|+|||++...+       +|+|.+||++.|+++.+  .+||.|+.   .|..|+||+++..
T Consensus        39 ~~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~~~~d--~~WWqar~~~~~g~~GlIPS~~~~  101 (337)
T 4dey_A           39 FAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFN--NDWWIGRLVKEGCEIGFIPSPVKL  101 (337)
T ss_dssp             EEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECS--SSEEEEEESSTTCCCEEEECHHHH
T ss_pred             EEEEEccccCCCCCCCCCcccccccccCCCEEEEEecCC--CCeEEEEECCCCCCccEecCHHHH
Confidence            468999999998755       49999999999999887  67999998   3688999999843

>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A

Probab=98.24  E-value=4.8e-07  Score=66.64  Aligned_cols=53  Identities=25%  Similarity=0.344  Sum_probs=46.8

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWG  250 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVe  250 (272)
                      .++|+++ ......+|+|.+||++.|+...+...|||.++.. |+.|++|.+||+
T Consensus        30 ~a~a~~~-~k~g~~dLp~~~GE~LeII~~~e~p~g~Wl~RN~~G~~GyVp~~~v~   83 (96)
T 2gtj_A           30 LAKACCD-VKGGKNELSFKQGEQIEIIRITDNPEGKWLGRTARGSYGYIKTTAVE   83 (96)
T ss_dssp             EEEESSC-EECTTSCCEECTTCCEEEEECTTCSSSCCEEECTTCCBCCCCGGGEE
T ss_pred             EEEEeec-CCCCcccCCcCCCCEEEEEEccCCCCCeEEEECCCCCCCccchhhEE
Confidence            5788998 6778999999999999999877655789999985 899999999997

>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A

Probab=98.08  E-value=3.7e-06  Score=77.88  Aligned_cols=58  Identities=12%  Similarity=0.114  Sum_probs=48.5

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeee--CCcCCeEEEEeCC------eeeeeeccchhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKE--GEQKGWWKGKIDE------RVSYFFQLYWGNFR  253 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~--ge~~gwW~G~~~g------~~G~fP~~yVeE~~  253 (272)
                      ...++|+|||++.+..+|+|.+||++.|+++.  ++ .+||.+...+      ..|++|++|+.|-.
T Consensus       106 ~~~vral~dy~~~~~~~Lsf~~Gdil~V~~~~~~~d-~~wW~a~~~~~~~~~~~~G~IPs~~~~e~~  171 (391)
T 3tsz_A          106 SFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGK-LGSWLAIRIGKNHKEVERGIIPNKNRAEQL  171 (391)
T ss_dssp             CEEEEECSCBCCSSTTBCCBCTTCEEEEEESSGGGS-SSEEEEEEECGGGCEEEEEEEECHHHHHHH
T ss_pred             ccccccccccCCCCCCcceEccCCEEEEEeccCCCC-CCeEEEEEeCCCCCcccCCEecCHHHHHHH
Confidence            34678999999999999999999999999874  22 6899998643      47999999998754

>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=98.06  E-value=1e-05  Score=58.84  Aligned_cols=59  Identities=19%  Similarity=0.245  Sum_probs=45.4

Q ss_pred             eeeeccCCCCCCCCCccCCCcEEEEeeeeCC---cCCeEEEEeCCeeeeeeccchhhhhhhcc
Q psy3210         198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGE---QKGWWKGKIDERVSYFFQLYWGNFRLLSS  257 (272)
Q Consensus       198 ~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge---~~gwW~G~~~g~~G~fP~~yVeE~~~mk~  257 (272)
                      ..+..++.+...-||+|.+||+|.|+++.+.   ...|| ....|+.||+|++||+.++..+.
T Consensus        20 Y~~t~~~~~tq~~dl~l~~GdlVAVl~k~Dp~Gn~srW~-Vdtgg~~GyvPs~yLe~~~~~~~   81 (92)
T 1ug1_A           20 FQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWL-IDNGVTKGFVYSSFLKPYNPRRS   81 (92)
T ss_dssp             EEESSCCCCCSSSCCCCCTTCEEEEEESCCTTSCSSEEE-EECSSSEEEEEGGGEEECCCCSS
T ss_pred             EEeccCcCCCCceeeeecCCCEEEEEecCCCCCCCcceE-EECCCcEEeeEhhhceEcccCCC
Confidence            4455566666788999999999999987544   13466 55589999999999998876654

>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}

Probab=98.06  E-value=3.4e-06  Score=75.51  Aligned_cols=56  Identities=14%  Similarity=0.149  Sum_probs=44.3

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCc-------CCeEEEEeC------Ceeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQ-------KGWWKGKID------ERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~-------~gwW~G~~~------g~~G~fP~~yVeE~  252 (272)
                      +++|+|||++..+.||+|.+||++.|++...++       .|||.+...      +..|++|.+|+.|-
T Consensus         6 yVRalfdy~~~~~~eL~F~kGDil~V~dt~~~~~~~~~~~~gwW~A~~~~~~~~~~~~G~IPs~~~aeq   74 (308)
T 3kfv_A            6 YIRTHFELEPSPPSGLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQSRAEQ   74 (308)
T ss_dssp             EEEECSCBCCCSSSBCCBCTTCEEEEEEC-------------CEEEEEECTTSCEEEEEEECCHHHHHH
T ss_pred             EEEEecCcCCCCcccCCCccCCEEEEccccCCCcccccccCceEEEEecCCCCCcCCCCeeechHHHHH
Confidence            578999999999999999999999999876532       469999864      26799999998753

>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}

Probab=98.05  E-value=3.3e-06  Score=84.05  Aligned_cols=58  Identities=17%  Similarity=0.295  Sum_probs=49.4

Q ss_pred             eeeeeeccCCCCCCCC-----CccCCCcEEEEeeeeCCcCCeEEEEeC------Ceeeeeeccchhhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQ-----LPLKQGCQVIVLSKEGEQKGWWKGKID------ERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       196 ~~~~alydf~~~~~~E-----Lsl~~Gd~i~v~~k~ge~~gwW~G~~~------g~~G~fP~~yVeE~~~m  255 (272)
                      ..++|+|||++...++     |+|++||++.|+++.+  .+||.++..      ++.|++|++|+.|-+..
T Consensus       428 ~~vrAl~dy~~~~d~~~p~~~LsF~~GDil~v~~~~~--~~WW~a~~~~~~~~~~~~G~iPs~~~~e~~~~  496 (721)
T 2xkx_A          428 FYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGD--EEWWQARRVHSDSETDDIGFIPSKRRVERREW  496 (721)
T ss_pred             eeEEEeeccCcCCCCCCccccccccCCCEEEEeecCC--CCeEEEEECCCCCccCccceeecHHHHHHHHh
Confidence            4578999999998888     9999999999998876  689999875      34699999999886543

>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A*

Probab=97.99  E-value=5.7e-06  Score=77.46  Aligned_cols=74  Identities=15%  Similarity=0.300  Sum_probs=58.0

Q ss_pred             cccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeC---CeeeEEEEEEecCCCcceEEeeccccc
Q psy3210          87 EYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTD---EKVKHMKVYEKEMDGVPQYFLSQSRYF  163 (272)
Q Consensus        87 ~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~---~~v~H~~I~~~~~g~~~~~~i~~~~~F  163 (272)
                      ...|++|.|+|++|+++|.+.+.|+||||-|++.     .|.|++|+...   +.++|+.|.....    .      ..-
T Consensus       350 ~dg~I~GFIsk~ea~~lL~~~~~GTFLLRFSeS~-----~GgitIsyV~~d~~~~~kh~~v~p~t~----~------ls~  414 (473)
T 1uur_A          350 QEGIIYGYMGRQEVNDALQNQDPGTFIIRFSERN-----PGQFGIAYIGVEMPARIKHYLVQPNDT----A------AAK  414 (473)
T ss_dssp             HHTSSCBSCCHHHHHHTTSSCCTTCEEEEECSSS-----TTCEEEEEECSSSSCCEEEEECCGGGS----B------TTT
T ss_pred             hcCcEEEEecHHHHHHHhhCCCCCeEEEEeccCC-----CceEEEEEEeecCCCceeEEEecCCcc----c------ccc
Confidence            3489999999999999999999999999999754     69999999873   6888888764322    1      123


Q ss_pred             chhhhhhhhhhc
Q psy3210         164 RSIVELICCYER  175 (272)
Q Consensus       164 ~sL~eLV~~y~~  175 (272)
                      .|+.|+|..|..
T Consensus       415 ~SL~D~I~d~~q  426 (473)
T 1uur_A          415 KTFPDFLSEHSQ  426 (473)
T ss_dssp             BCHHHHHTTCTT
T ss_pred             CCHHHHHhccHH
Confidence            677788777643

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=97.98  E-value=9.8e-06  Score=67.74  Aligned_cols=56  Identities=20%  Similarity=0.402  Sum_probs=49.9

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|+|.++..+||.|++||++.+....+  .+||.+...|+.|++|.+|+.+.
T Consensus        14 ~~~~~al~d~~~~~~~el~~~~Gd~~~v~~~~~--~~w~~~~~~g~~gl~p~~~v~~~   69 (222)
T 3ehr_A           14 VKVFRALYTFEPRTPDELYIEEGDIIYITDMSD--TNWWKGTSKGRTGLIPSNYVAEQ   69 (222)
T ss_dssp             CEEEEESSCCCCSSTTBCCCCTTCEEEEEECCS--SSEEEEEETTEEEEEEHHHHHHH
T ss_pred             ceEEEEeCCcCCCCCCcccccCCCEEEEecccc--chhHhcccCCcceeechhhcccc
Confidence            346789999999999999999999998887665  68999999999999999999754

>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}

Probab=97.98  E-value=2.7e-06  Score=58.59  Aligned_cols=33  Identities=24%  Similarity=0.389  Sum_probs=28.1

Q ss_pred             eehhcccCCCceecCcCCcchhccccc-CCCCCC
Q psy3210          13 IVTLKSRGLRPLCSQACYLACHKQCIP-HTGRCG   45 (272)
Q Consensus        13 ~~~~~g~~~qg~~c~~c~~~~h~~c~~-~~~~C~   45 (272)
                      ..+|.|+++|||.|..|+..+|++|.. ++..|+
T Consensus        30 ~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~   63 (65)
T 2enz_A           30 GTLLWGLARQGLKCDACGMNVHHRCQTKVANLCG   63 (65)
T ss_dssp             CCBCCCSSSCSEEESSSCCEECTTTTTTSCSCTT
T ss_pred             ChhheecCCcccccCCCCCccCHhHHhhCcCcCC
Confidence            457799999999999999999999955 455675

>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.91  E-value=6.6e-06  Score=59.43  Aligned_cols=35  Identities=26%  Similarity=0.368  Sum_probs=30.1

Q ss_pred             eehhcccCCCceecCcCCcchhccccc-CCCCCCCC
Q psy3210          13 IVTLKSRGLRPLCSQACYLACHKQCIP-HTGRCGTG   47 (272)
Q Consensus        13 ~~~~~g~~~qg~~c~~c~~~~h~~c~~-~~~~C~~~   47 (272)
                      ..+|.|+++|||.|..|+..+|++|.. ++..|...
T Consensus        35 ~~~lwGl~kqg~~C~~C~~~~Hk~C~~~v~~~C~~~   70 (83)
T 2yuu_A           35 KDFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRCTGT   70 (83)
T ss_dssp             CCCCCSSSCCEEEETTTCCEECTTGGGTCCSCCSSC
T ss_pred             ChhhccccccccccCCcCCeeChhhhhhCCCcCCCc
Confidence            457899999999999999999999965 46789763

>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}

Probab=97.90  E-value=1.2e-05  Score=75.87  Aligned_cols=56  Identities=13%  Similarity=0.137  Sum_probs=47.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeee--CCcCCeEEEEeC---C---eeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKE--GEQKGWWKGKID---E---RVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~--ge~~gwW~G~~~---g---~~G~fP~~yVeE~  252 (272)
                      ..++|+|||++.+..+|+|.+||++.|+++.  ++ .+||.+...   +   +.|++|++|+.|-
T Consensus        99 ~yVralfdy~~~~~~~LsF~~GDIL~V~d~~~~~d-~~wW~A~~~~~~~~~~~~GlIPs~~~~e~  162 (468)
T 3shw_A           99 FYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGK-LGSWLAIRIGKNHKEVERGIIPNKNRAEQ  162 (468)
T ss_dssp             EEEEECSCBCCSSTTBCCBCTTCEEEEEESSGGGC-TTEEEEEEECTTSCEEEEEEEECHHHHHH
T ss_pred             cccccccCcCCCCCCCceEccCCEEEEeecccCCC-CCeEEEEEcCCCCcccccceecCHHHHHH
Confidence            3678999999999999999999999999874  22 689999863   3   5899999999764

>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*

Probab=97.89  E-value=3.1e-06  Score=55.03  Aligned_cols=29  Identities=17%  Similarity=0.190  Sum_probs=25.3

Q ss_pred             eehhcccCCCceecCcCCcchhcccccCC
Q psy3210          13 IVTLKSRGLRPLCSQACYLACHKQCIPHT   41 (272)
Q Consensus        13 ~~~~~g~~~qg~~c~~c~~~~h~~c~~~~   41 (272)
                      ..+|.|+++|||.|..|+..+|++|...+
T Consensus        18 ~~~l~g~~~qg~~C~~C~~~~H~~C~~~v   46 (50)
T 1ptq_A           18 GSLLWGLVKQGLKCEDCGMNVHHKCREKV   46 (50)
T ss_dssp             CCBCCSSSSCEEEETTTCCEECHHHHTTS
T ss_pred             CceeeccCCccCEeCCCCCeECHHHhhhc
Confidence            45679999999999999999999996544

>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.84  E-value=2.4e-06  Score=60.47  Aligned_cols=34  Identities=18%  Similarity=0.297  Sum_probs=29.3

Q ss_pred             eehhcccCCCceecCcCCcchhcccccCCC--CCCC
Q psy3210          13 IVTLKSRGLRPLCSQACYLACHKQCIPHTG--RCGT   46 (272)
Q Consensus        13 ~~~~~g~~~qg~~c~~c~~~~h~~c~~~~~--~C~~   46 (272)
                      ..+|.|+++|||.|..|+..+|++|...++  .|.+
T Consensus        35 ~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~~~~C~~   70 (74)
T 2db6_A           35 ARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQRCSG   70 (74)
T ss_dssp             CCEECHHHHEEEEESSSCCEECTTTTGGGSSSBCCC
T ss_pred             ChhhccccCCccccCCCCCccChhHHhhCCCCcCCC
Confidence            457789999999999999999999977665  4976

>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}

Probab=97.82  E-value=7.1e-06  Score=58.45  Aligned_cols=34  Identities=21%  Similarity=0.350  Sum_probs=28.7

Q ss_pred             eehhcccCCCceecCcCCcchhcccccC-CCCCCC
Q psy3210          13 IVTLKSRGLRPLCSQACYLACHKQCIPH-TGRCGT   46 (272)
Q Consensus        13 ~~~~~g~~~qg~~c~~c~~~~h~~c~~~-~~~C~~   46 (272)
                      ..+|.|+++|||.|..|+..||+.|... +..|..
T Consensus        41 ~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~   75 (77)
T 2enn_A           41 HEFVWGLNKQGYQCRQCNAAIHKKCIDKVIAKCTG   75 (77)
T ss_dssp             CCEECCTTCCEEECSSSCCEEESGGGSSCCSCCCC
T ss_pred             ChhhccccccccCcCCCCCcCCHhHHhhCcCCCCC
Confidence            4578899999999999999999999554 557865

>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*

Probab=97.79  E-value=3.2e-06  Score=58.18  Aligned_cols=34  Identities=18%  Similarity=0.234  Sum_probs=28.4

Q ss_pred             eehhcccCCCceecCcCCcchhcccccC-CCCCCC
Q psy3210          13 IVTLKSRGLRPLCSQACYLACHKQCIPH-TGRCGT   46 (272)
Q Consensus        13 ~~~~~g~~~qg~~c~~c~~~~h~~c~~~-~~~C~~   46 (272)
                      ..+|.|+++|||.|..|+..+||+|... +..|+-
T Consensus        27 ~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~   61 (65)
T 3uej_A           27 GSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCEF   61 (65)
T ss_dssp             CCBCCSSSSCEEEETTTCCEECHHHHTTSCSEEEE
T ss_pred             ChhhhccCceeeECCCCCCeEchhHhhhCCCcCCC
Confidence            4578999999999999999999999554 556864

>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}

Probab=97.73  E-value=5.7e-06  Score=57.12  Aligned_cols=34  Identities=18%  Similarity=0.320  Sum_probs=27.4

Q ss_pred             eehhcccCCCceecCcCCcchhccc-ccCCCCCCC
Q psy3210          13 IVTLKSRGLRPLCSQACYLACHKQC-IPHTGRCGT   46 (272)
Q Consensus        13 ~~~~~g~~~qg~~c~~c~~~~h~~c-~~~~~~C~~   46 (272)
                      ..+|.|+++|||.|..|+..+|++| ..++..|..
T Consensus        31 ~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~   65 (66)
T 1y8f_A           31 EGLLWGIARQGMRCTECGVKCHEKCQDLLNADCKL   65 (66)
T ss_dssp             CCCCCSSCCEEEEETTTCCEECTTHHHHSCCCC--
T ss_pred             ChhhcccCcceeEcCCCCCeeCHHHHhhCcCcCCC
Confidence            4567899999999999999999999 455666753

>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.69  E-value=1.6e-05  Score=57.69  Aligned_cols=34  Identities=24%  Similarity=0.398  Sum_probs=28.7

Q ss_pred             eehhcccCCCceecCcCCcchhcccccC-CCCCCC
Q psy3210          13 IVTLKSRGLRPLCSQACYLACHKQCIPH-TGRCGT   46 (272)
Q Consensus        13 ~~~~~g~~~qg~~c~~c~~~~h~~c~~~-~~~C~~   46 (272)
                      ..+|.|+++|||.|..|+..+|++|... +..|+.
T Consensus        35 ~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~   69 (85)
T 2eli_A           35 GSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLCGM   69 (85)
T ss_dssp             CCBCCCSSSCEEECSSSCCEEETTTTTTSCSCCCC
T ss_pred             CccccccccCCCcCCCcCCccCHhHHhhcCCcCCc
Confidence            3567999999999999999999999654 556865

>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}

Probab=97.67  E-value=3.4e-05  Score=63.69  Aligned_cols=79  Identities=10%  Similarity=0.127  Sum_probs=58.2

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCc--eEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADG--TYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS  160 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G--~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~  160 (272)
                      .++..++||++  +++++|++|....++  .|.++.+.+     .+|.|.|++. .+.++|-.|.-. .|    |.+ ..
T Consensus        96 ~~~~~h~kf~~--s~~~~e~~L~~~~p~~~~Y~f~~s~~-----~PG~f~l~~~-~~~~~~e~i~V~-~g----~~~-~~  161 (178)
T 2xp1_A           96 KSIKAHAKYFN--SPEDAEKLLSSFDGSKVVYAFYFSRK-----YPGKLTFAYN-NGSILEEYIGVS-DM----LTY-NN  161 (178)
T ss_dssp             HHHHHSTTBCS--CTTTSHHHHHTCCSSSCEEEEEECSS-----STTEEEEEEE-SSSEEEEEEEES-SS----EEE-TT
T ss_pred             HHHHhCCccCC--CHHHHHHHHHHhCCCCceEEEEecCC-----CCCeEEEEEc-CCCCceeeEEEc-cC----CEE-cC
Confidence            34567899998  899999999654223  399998864     4699999997 556666555444 33    455 45


Q ss_pred             cccchhhhhhhhhhc
Q psy3210         161 RYFRSIVELICCYER  175 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~  175 (272)
                      ..|+||.+||+||++
T Consensus       162 ~~f~sl~~L~~~fK~  176 (178)
T 2xp1_A          162 STFKDIDSFVAYRKR  176 (178)
T ss_dssp             EEESSHHHHHHHHHC
T ss_pred             cCCcCHHHHHHHHhh
Confidence            579999999999985

>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*

Probab=97.64  E-value=4.3e-05  Score=67.92  Aligned_cols=58  Identities=21%  Similarity=0.393  Sum_probs=42.0

Q ss_pred             eeeeeeccCCCCCCC-----CCccCCCcEEEEeeeeCCcCCeEEEEeC------Ceeeeeeccchhhhhhh
Q psy3210         196 IIAVAEFDFCPTEAN-----QLPLKQGCQVIVLSKEGEQKGWWKGKID------ERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       196 ~~~~alydf~~~~~~-----ELsl~~Gd~i~v~~k~ge~~gwW~G~~~------g~~G~fP~~yVeE~~~m  255 (272)
                      .+++|+|||++...+     .|+|++||++.|.++.+  .+||.+..-      .+.|++|+....|-+..
T Consensus         6 ~yvRa~fdY~~~~D~~~P~~gL~F~~gDiL~V~~~~d--~~wWqA~~v~~~~~~~~~GlIPS~~~~e~~~~   74 (292)
T 3tvt_A            6 LYVRALFDYDPNRDDGLPSRGLPFKHGDILHVTNASD--DEWWQARRVLGDNEDEQIGIVPSKRRWERKMR   74 (292)
T ss_dssp             CEEEECSCBCC---------CCCBCTTCEEEEEECCS--SSEEEECCCCC--------EEECHHHHHHHHH
T ss_pred             EEEEEeccCCCCCCCCCCCCcCCcCCCCEEEEeecCC--CCeEEEEEeCCCCCccceeEEeChHHHHHHHH
Confidence            368999999987543     69999999999999977  689999853      25799999877765443

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}

Probab=97.49  E-value=8.8e-06  Score=61.49  Aligned_cols=37  Identities=22%  Similarity=0.490  Sum_probs=30.7

Q ss_pred             CCcceeecCccC-cCCcccccEeeeeCCHHHHHHhccc
Q psy3210          70 GGNEWTAKSWAD-HENLSEYLWFVGEMGREKATSLLER  106 (272)
Q Consensus        70 ~~~g~~P~~~~~-~~~l~~~~Wf~g~isR~~Ae~lL~~  106 (272)
                      +..||+|+++.+ ...++.++||+|.|+|++||++|..
T Consensus        71 g~~G~~P~~yv~~~~~~~~~~w~~g~isR~~Ae~lL~~  108 (109)
T 2yt6_A           71 GKSGYIPSNYVVPADSIQAEEWYFGKMGRKDAESGPSS  108 (109)
T ss_dssp             CCEEEECTTTEEESSSCTTTHHHHHCCCSCCCCCCSCC
T ss_pred             CCEEEechHHcEECCcccccccccCCcCHHHHHHHhhC
Confidence            457899999954 3457888999999999999999853

>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}

Probab=97.34  E-value=3.8e-05  Score=55.45  Aligned_cols=33  Identities=21%  Similarity=0.326  Sum_probs=29.2

Q ss_pred             ehhcccCCC--ceecCcCCcchhccccc----CCCCCCC
Q psy3210          14 VTLKSRGLR--PLCSQACYLACHKQCIP----HTGRCGT   46 (272)
Q Consensus        14 ~~~~g~~~q--g~~c~~c~~~~h~~c~~----~~~~C~~   46 (272)
                      -+|-|+++|  ||.|+.|+..+||.|..    ++..|+-
T Consensus        43 ~~lWGl~kqp~G~~C~~C~~~~HkrC~~k~~~v~~~C~~   81 (84)
T 2row_A           43 KPLWHMFKPPPALECRRCHIKCHKDHMDKKEEIIAPCKV   81 (84)
T ss_dssp             SEECCSSSCCCEEEESSSCCEEEHHHHHHTCTTCCCCST
T ss_pred             HhhhccccCCCCCEecCCCCccchhHhCCccccccccCc
Confidence            467899998  99999999999999965    8888875

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=97.32  E-value=2.2e-06  Score=77.86  Aligned_cols=53  Identities=15%  Similarity=0.022  Sum_probs=40.5

Q ss_pred             eeeeccCCCC----CCCCCcc--CCCcEEEEeeeeCCcCCeEEEEeCC---eeeeeecc-chhhh
Q psy3210         198 AVAEFDFCPT----EANQLPL--KQGCQVIVLSKEGEQKGWWKGKIDE---RVSYFFQL-YWGNF  252 (272)
Q Consensus       198 ~~alydf~~~----~~~ELsl--~~Gd~i~v~~k~ge~~gwW~G~~~g---~~G~fP~~-yVeE~  252 (272)
                      ++|+|+|.+.    +..+|+|  .+||+|+|+++.+  .|||.|+.+|   +.|+||.+ ||+.+
T Consensus       269 ~~a~yd~~~~~~~~~e~eL~~~~~~GD~I~v~~~~d--~gWw~Ge~~g~~G~~glfP~~~~v~~~  331 (341)
T 2dyb_A          269 LKDLLELTRREFQREDIALNYRDAEGDLVRLLSDED--VALMVRQARGLPSQKRLFPWKLHITQK  331 (341)
T ss_dssp             HHHHHHHHHHHHTCSCEEEEEECSSSCEEECCSHHH--HHHHHHHHTTSCCBTTBCSSCEEEEEC
T ss_pred             hhhhhhhhhhhcCCCcccccCCCCCCCEEEEeeecC--CCEeEEEECCCCCCCceecceeEEEec
Confidence            4678999773    3445555  7999999998876  6899999865   55699998 66643

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A

Probab=97.31  E-value=5.8e-05  Score=73.24  Aligned_cols=36  Identities=19%  Similarity=0.435  Sum_probs=30.4

Q ss_pred             heehhcccCCCceecCcCCcchhcccccCCCCCCCC
Q psy3210          12 SIVTLKSRGLRPLCSQACYLACHKQCIPHTGRCGTG   47 (272)
Q Consensus        12 ~~~~~~g~~~qg~~c~~c~~~~h~~c~~~~~~C~~~   47 (272)
                      -..++.|+++|||.|..|+..||+.|...++.|+.+
T Consensus       535 C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v~~C~~~  570 (587)
T 3ky9_A          535 CQMLLRGTFYQGYRCHRCRASAHKECLGRVPPCGRH  570 (587)
T ss_dssp             TCSBCCSSSCCEEEETTTCCEECSGGGGGSCCC---
T ss_pred             ccccccccccCCcCCCCCCCccchhhhhcCCCCCCC
Confidence            456789999999999999999999998888999874

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}

Probab=97.08  E-value=0.00049  Score=60.80  Aligned_cols=51  Identities=10%  Similarity=0.148  Sum_probs=42.3

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWG  250 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVe  250 (272)
                      ...++|+|||.+   .++++.+||.+++++..+  ..||+.+.. |..|++|++|+.
T Consensus       198 ~~~v~al~dy~~---~e~~~~kge~~~l~~~s~--~~wW~v~~~~G~~g~vPs~~~~  249 (283)
T 3pe0_A          198 RLPLLAVCDYKQ---VEVTVHKGDECQLVGPAQ--PSHWKVLSSSGSEAAVPSVCFL  249 (283)
T ss_dssp             CEEEEECSCEEC---SSCEECTTCEEEEEEECS--TTEEEEECC---EEEEEGGGEE
T ss_pred             CceEEeecCccC---CcccccCCCEEEEeeCCC--CCceEEEcCCCCEeeccceEEe
Confidence            357899999976   479999999999998876  579999875 789999999986

>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A

Probab=97.01  E-value=0.00028  Score=45.92  Aligned_cols=25  Identities=20%  Similarity=0.400  Sum_probs=21.1

Q ss_pred             CceecCcCCcchhccccc-CCCCCCC
Q psy3210          22 RPLCSQACYLACHKQCIP-HTGRCGT   46 (272)
Q Consensus        22 qg~~c~~c~~~~h~~c~~-~~~~C~~   46 (272)
                      |||.|..|+..+|++|.. ++..|.+
T Consensus        26 qG~~C~~C~~~~H~~C~~~v~~~C~~   51 (52)
T 1faq_A           26 NGFRCQTCGYKFHEHCSTKVPTMCVD   51 (52)
T ss_dssp             SEEECTTTTCCBCSTTSSSSSSCCCC
T ss_pred             cCCEeCCCCCeEChhHHhhCcCcCCC
Confidence            999999999999999955 4557754

>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}

Probab=96.94  E-value=0.00035  Score=48.87  Aligned_cols=25  Identities=24%  Similarity=0.565  Sum_probs=21.3

Q ss_pred             CCCceecCcCCcchhcccccC-CCCC
Q psy3210          20 GLRPLCSQACYLACHKQCIPH-TGRC   44 (272)
Q Consensus        20 ~~qg~~c~~c~~~~h~~c~~~-~~~C   44 (272)
                      +.|||.|+.|+..+|++|... +..|
T Consensus        46 ~~qG~kC~~C~~~cHkkC~~~V~~~C   71 (72)
T 2fnf_X           46 LRQALRCANCKFTCHSECRSLIQLDC   71 (72)
T ss_dssp             SSCCEECTTSSCEECTGGGGGCCSCC
T ss_pred             HhCcCccCCCCCeechhhhccCcCCC
Confidence            789999999999999999554 4456

>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding, SH2 domain, transcription REGU signaling protein; 3.21A {Mus musculus}

Probab=96.86  E-value=0.00075  Score=65.00  Aligned_cols=43  Identities=28%  Similarity=0.363  Sum_probs=37.6

Q ss_pred             cEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeC
Q psy3210          89 LWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTD  136 (272)
Q Consensus        89 ~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~  136 (272)
                      .|.+|.|+|++|+++|...+.|+||+|-|++.     .|.|++|+...
T Consensus       465 G~I~Gfisk~~a~~~L~~~~~GtFLlRFSds~-----~G~~tisyv~~  507 (585)
T 1y1u_A          465 GAILGFVNKQQAHDLLINKPDGTFLLRFSDSE-----IGGITIAWKFD  507 (585)
T ss_dssp             TCCCBSCCHHHHHHHHHTSCTTCEEEEEETTS-----TTEEEEEECCS
T ss_pred             cceEEeccHHHHHHHHhCCCCCceEEEeccCC-----cCcEEEEEEec
Confidence            45678999999999999999999999999754     69999999774

>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A

Probab=96.80  E-value=0.00054  Score=44.21  Aligned_cols=25  Identities=24%  Similarity=0.673  Sum_probs=22.8

Q ss_pred             CCceecCcCCcchhcccccCCCCCC
Q psy3210          21 LRPLCSQACYLACHKQCIPHTGRCG   45 (272)
Q Consensus        21 ~qg~~c~~c~~~~h~~c~~~~~~C~   45 (272)
                      .||+.|+-|+..+|++|...++.|.
T Consensus        25 ~~G~kC~~Ck~~cH~kC~~~vp~c~   49 (49)
T 1kbe_A           25 IFGVKCKHCRLKCHNKCTKEAPACR   49 (49)
T ss_dssp             CCEEEETTTTEEESSSCTTTSCCCC
T ss_pred             ECcCCCCCCCCccchhhcCcCCCCC
Confidence            4899999999999999988988884

>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}

Probab=96.63  E-value=0.00066  Score=45.52  Aligned_cols=25  Identities=24%  Similarity=0.565  Sum_probs=21.2

Q ss_pred             CCCceecCcCCcchhcccccC-CCCC
Q psy3210          20 GLRPLCSQACYLACHKQCIPH-TGRC   44 (272)
Q Consensus        20 ~~qg~~c~~c~~~~h~~c~~~-~~~C   44 (272)
                      +.|||.|+.|+..+|++|... +..|
T Consensus        33 ~kqg~kC~~C~~~cH~kC~~~v~~~C   58 (59)
T 1rfh_A           33 LRQALRCANCKFTCHSECRSLIQLDC   58 (59)
T ss_dssp             CSCCEECTTTSCEECHHHHTTCCCCC
T ss_pred             hhCccEeCCCCCeEehhhhhhCcCCC
Confidence            699999999999999999544 4456

>1yvl_A Signal transducer and activator of transcription 1-alpha/beta; signaling protein; HET: PTR; 3.00A {Homo sapiens}

Probab=96.59  E-value=0.002  Score=62.96  Aligned_cols=74  Identities=20%  Similarity=0.304  Sum_probs=51.1

Q ss_pred             cEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeC---C-eeeEEEEEEecCCCcceEEeecccccc
Q psy3210          89 LWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTD---E-KVKHMKVYEKEMDGVPQYFLSQSRYFR  164 (272)
Q Consensus        89 ~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~---~-~v~H~~I~~~~~g~~~~~~i~~~~~F~  164 (272)
                      .|..|.|+|++|+++|++.++||||+|-|++    +..|.++++....   + .+.++.|   .     .|...+- .-.
T Consensus       576 G~I~GFIsK~~a~~lL~~~~~GTFLLRFSdS----~~~Ggitia~V~~~~~~~~~~v~~v---~-----P~t~kdl-~~~  642 (683)
T 1yvl_A          576 GCIMGFISKERERALLKDQQPGTFLLRFSES----SREGAITFTWVERSQNGGEPDFHAV---E-----PYTKKEL-SAV  642 (683)
T ss_dssp             TCCCBCCCHHHHHHHHSSSCSSCEEEEECSS----CSSCEEEEEEEECCC---CCEEEEB---C-----CEEHHHH-TTS
T ss_pred             CceEEeecHHHHHHHHhCCCCCeEEEecCCC----CCCCceEEEEEeccCCCccceEEec---C-----CCchHhh-hhC
Confidence            4557889999999999999999999999975    1469999988773   2 4433222   1     2332211 225


Q ss_pred             hhhhhhhhhhc
Q psy3210         165 SIVELICCYER  175 (272)
Q Consensus       165 sL~eLV~~y~~  175 (272)
                      |+.|.|..|+.
T Consensus       643 sl~d~i~d~~~  653 (683)
T 1yvl_A          643 TFPDIIRNYKV  653 (683)
T ss_dssp             CHHHHHHHCCE
T ss_pred             CHHHHhhchhh
Confidence            77888988864

>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}

Probab=96.45  E-value=0.0012  Score=44.56  Aligned_cols=29  Identities=21%  Similarity=0.327  Sum_probs=24.2

Q ss_pred             ccCCCceecCcCCcchhccc-ccCCCCCCC
Q psy3210          18 SRGLRPLCSQACYLACHKQC-IPHTGRCGT   46 (272)
Q Consensus        18 g~~~qg~~c~~c~~~~h~~c-~~~~~~C~~   46 (272)
                      ++.+|||.|..|+..+|++| -..+..|..
T Consensus        30 ~~gkq~~kC~dC~~~cH~~C~~~~~~~C~p   59 (61)
T 4b6d_A           30 KFGKLSLKCRDCRVVSHPECRDRCPLPCIP   59 (61)
T ss_dssp             CTTCEEEEESSSSCEECGGGGGGSCSSCCC
T ss_pred             EEeeEeeECCCCCCeEchhHhhcCCCCCCC
Confidence            56789999999999999999 555777744

>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex, cytokine activation, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA PTR; 2.25A {Mus musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A

Probab=96.07  E-value=0.00066  Score=65.32  Aligned_cols=74  Identities=22%  Similarity=0.300  Sum_probs=51.4

Q ss_pred             cEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeC---CeeeEEEEEEecCCCcceEEeecccccch
Q psy3210          89 LWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTD---EKVKHMKVYEKEMDGVPQYFLSQSRYFRS  165 (272)
Q Consensus        89 ~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~---~~v~H~~I~~~~~g~~~~~~i~~~~~F~s  165 (272)
                      .|.+|.|+|++|+++|.+.+.|+||+|-|++    +..|.+++|....   +.+.|+.|.-        |...+ -.-.|
T Consensus       457 G~I~Gfisk~~a~~lL~~~~~GTFLlRFSes----~~~Ggitis~v~~~~~g~~~~~~v~P--------~t~~~-l~~~s  523 (596)
T 1bg1_A          457 GYIMGFISKERERAILSTKPPGTFLLRFSES----SKEGGVTFTWVEKDISGSTQIQSVEP--------YTKQQ-LNNMS  523 (596)
T ss_dssp             SCCCBCCCTTGGGTTTTTSCTTCBCEEECSS----CSSCCEEECCCCSSSCSSCCCCCCCC--------BCGGG-GTSSC
T ss_pred             CCeEEEecHHHHHHHHhCCCCCeeEEeecCC----CCCCcEEEEEEecCCCCceeEEecCC--------Cchhh-hccCC
Confidence            4557889999999999999999999999975    1469999998773   3444443321        21111 12347


Q ss_pred             hhhhhhhhhc
Q psy3210         166 IVELICCYER  175 (272)
Q Consensus       166 L~eLV~~y~~  175 (272)
                      +.|+|..|+.
T Consensus       524 Lad~I~d~~~  533 (596)
T 1bg1_A          524 FAEIIMGYKI  533 (596)
T ss_dssp             HHHHTTSCCC
T ss_pred             HHHHHHhhhh
Confidence            8899977753

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}

Probab=95.93  E-value=0.0052  Score=57.66  Aligned_cols=51  Identities=16%  Similarity=0.066  Sum_probs=44.3

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWG  250 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVe  250 (272)
                      ...|+|+|||.   ..|+++.+||.+++++..+  ..||+-+.. |..|++|+.|+.
T Consensus       283 ~~~V~alcdy~---~~e~~i~kge~~~L~~ns~--~~~W~V~~~~G~~~~vPavcf~  334 (450)
T 3r6n_A          283 PIILRALCDYK---QDQKIVHKGDECILKDNNE--RSKWYVTGPGGVDMLVPSVGLI  334 (450)
T ss_dssp             CCEEEESSCEE---ETTEEECTTCEEEEEECSS--SSEEEEECSSSCCEEEEGGGEE
T ss_pred             CceEEEecccc---CCeeeEecCCEEEEecCCC--CCceEEecCCCCeeccceeEEe
Confidence            45688999998   4789999999999998877  679999886 799999999875

>1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1

Probab=95.87  E-value=0.0052  Score=58.87  Aligned_cols=75  Identities=19%  Similarity=0.262  Sum_probs=50.1

Q ss_pred             cEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeC---C-eeeEEEEEEecCCCcceEEeecccccc
Q psy3210          89 LWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTD---E-KVKHMKVYEKEMDGVPQYFLSQSRYFR  164 (272)
Q Consensus        89 ~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~---~-~v~H~~I~~~~~g~~~~~~i~~~~~F~  164 (272)
                      .|..|.|++++|+++|.+.+.|+||+|-|++    +..|.++++....   + .+.++.|.        .|...+ -.-.
T Consensus       441 G~I~GFIsK~~a~~lL~~~~~GTFLLRFSdS----~~~GgITia~V~~~~~~~~~~v~~v~--------P~T~kd-l~~~  507 (575)
T 1bf5_A          441 GCIMGFISKERERALLKDQQPGTFLLRFSES----SREGAITFTWVERSQNGGEPDFHAVE--------PYTKKE-LSAV  507 (575)
T ss_dssp             TCCCCCCCHHHHHHHTTTCCSCCCCEEECSS----CSSCCEEEEECCCCSSSSCCCCEECC--------CBCHHH-HHSS
T ss_pred             CceEEeecHHHHHHHHhCCCCCeEEEecCCC----CCCCcEEEEEEecCCCCccceeEecC--------CCchhh-hhhC
Confidence            3457788999999999999999999999975    1468898888763   2 33322221        111111 1224


Q ss_pred             hhhhhhhhhhcc
Q psy3210         165 SIVELICCYERN  176 (272)
Q Consensus       165 sL~eLV~~y~~~  176 (272)
                      |+.|.|..|+.-
T Consensus       508 sL~d~i~d~~~l  519 (575)
T 1bf5_A          508 TFPDIIRNYKVM  519 (575)
T ss_dssp             CHHHHHHTCCCS
T ss_pred             CHHHHhhcchhh
Confidence            678888888653

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=95.63  E-value=0.0021  Score=46.43  Aligned_cols=37  Identities=8%  Similarity=0.025  Sum_probs=12.1

Q ss_pred             CCCcceeecCccCcCCcccccEeeeeCCHHHHHHhcc
Q psy3210          69 LGGNEWTAKSWADHENLSEYLWFVGEMGREKATSLLE  105 (272)
Q Consensus        69 ~~~~g~~P~~~~~~~~l~~~~Wf~g~isR~~Ae~lL~  105 (272)
                      .+..||+|+++..........+|+|.|+|.+|+.+|.
T Consensus        45 ~g~~G~~P~~yv~~~~~~~~~~~~~~~~r~~ae~lL~   81 (90)
T 3reb_B           45 TRKEGYIPSNYVARVDSGGGTSGGGRHRRRQAERMSQ   81 (90)
T ss_dssp             TCCEEEEEGGGEEEECC--------------------
T ss_pred             CCCEEEEehhheEECCCCCCcccccCcCHHHHHHHHh
Confidence            4568999999965443333444999999999999994

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=95.59  E-value=0.0021  Score=63.29  Aligned_cols=34  Identities=24%  Similarity=0.301  Sum_probs=0.0

Q ss_pred             ehhcccCCCceecCcCCcchhcccc-cCCCCCCCC
Q psy3210          14 VTLKSRGLRPLCSQACYLACHKQCI-PHTGRCGTG   47 (272)
Q Consensus        14 ~~~~g~~~qg~~c~~c~~~~h~~c~-~~~~~C~~~   47 (272)
                      -+|-|+.+|||.|..|+..||+.|. .++..|.+.
T Consensus        56 ~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~   90 (674)
T 3pfq_A           56 DFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGA   90 (674)
T ss_dssp             -----------------------------------
T ss_pred             ccccccCCceeECCCCCCCcChhhcCcCcccCCCc
Confidence            4678999999999999999999994 567788543

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=95.35  E-value=0.0044  Score=58.33  Aligned_cols=33  Identities=21%  Similarity=0.272  Sum_probs=27.6

Q ss_pred             ehhcccCCCceecCcCCcchhccccc-CCCCCCC
Q psy3210          14 VTLKSRGLRPLCSQACYLACHKQCIP-HTGRCGT   46 (272)
Q Consensus        14 ~~~~g~~~qg~~c~~c~~~~h~~c~~-~~~~C~~   46 (272)
                      .++-|++.|||.|..|+..||++|.. .+..|+.
T Consensus       228 ~~l~g~~~qg~~C~~C~~~~Hk~C~~~vp~~C~~  261 (463)
T 3cxl_A          228 NFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKP  261 (463)
T ss_dssp             CBCCSSSCCEEEETTTCCEECHHHHTTSCSBCCG
T ss_pred             hhhhhHHhcCeeccccCccccccccccccccccc
Confidence            45689999999999999999999954 4567854

>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}

Probab=95.22  E-value=0.0033  Score=65.51  Aligned_cols=82  Identities=13%  Similarity=0.323  Sum_probs=0.0

Q ss_pred             cccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEee-CCeeeEEEEEEecCC----CcceEEeeccc
Q psy3210          87 EYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKT-DEKVKHMKVYEKEMD----GVPQYFLSQSR  161 (272)
Q Consensus        87 ~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~-~~~v~H~~I~~~~~g----~~~~~~i~~~~  161 (272)
                      .+|-|+ +++-.+||+.|.....|.++||.|++.     ....+++++. ++...|+-|...+..    -|+.+.|++. 
T Consensus      1023 ~HP~F~-n~~~~qAe~~L~~~~~Gd~vIRPSSkG-----~dhLtvTwKv~d~vyqHidV~E~~K~n~~slG~~L~I~~~- 1095 (1219)
T 3psi_A         1023 NHPYYF-PFNGRQAEDYLRSKERGEFVIRQSSRG-----DDHLVITWKLDKDLFQHIDIQELEKENPLALGKVLIVDNQ- 1095 (1219)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cCCCCC-CCCHHHHHHHHhcCCCCCEEEeecCCC-----CCceEEEEEEcCCcEEEEEEEecCCccccccCceEEECCc-
Confidence            346777 699999999999988899999999754     3667888887 567889988864321    1235677665 


Q ss_pred             ccchhhhhhhhhhc
Q psy3210         162 YFRSIVELICCYER  175 (272)
Q Consensus       162 ~F~sL~eLV~~y~~  175 (272)
                      .|.+|.|||.-|-.
T Consensus      1096 ~y~DLDEli~r~V~ 1109 (1219)
T 3psi_A         1096 KYNDLDQIIVEYLQ 1109 (1219)
T ss_dssp             --------------
T ss_pred             eECCHHHHHHHHHH
Confidence            69999999988844

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=95.15  E-value=0.008  Score=59.05  Aligned_cols=34  Identities=24%  Similarity=0.428  Sum_probs=29.4

Q ss_pred             eehhcccCCCceecCcCCcchhcccc-cCCCCCCC
Q psy3210          13 IVTLKSRGLRPLCSQACYLACHKQCI-PHTGRCGT   46 (272)
Q Consensus        13 ~~~~~g~~~qg~~c~~c~~~~h~~c~-~~~~~C~~   46 (272)
                      ..+|.|++.|||+|..|+..||+.|. .++..|+.
T Consensus       120 ~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~  154 (674)
T 3pfq_A          120 GSLLYGLIHQGMKCDTCMMNVHKRCVMNVPSLCGT  154 (674)
T ss_dssp             CSCCBBSSSCEECCSSSCCCBCSSTTSSSCCCSSS
T ss_pred             ccccchhhcCccccccCCcchhhhhhhccCccccc
Confidence            45688999999999999999999994 56778975

>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*

Probab=95.10  E-value=0.027  Score=49.74  Aligned_cols=48  Identities=13%  Similarity=0.252  Sum_probs=40.3

Q ss_pred             ccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeC-Ceee
Q psy3210          88 YLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTD-EKVK  140 (272)
Q Consensus        88 ~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~-~~v~  140 (272)
                      .+=|.+.++-+||.+.|..  ...|+|++|-|.     +..|.|+|++... +.|.
T Consensus       243 hpGy~aFlTydEv~~~L~~~~~kpGsYIfR~Sc-----TrlGqwAIgyV~~~~~I~  293 (329)
T 3bux_B          243 HPGYMAFLTYDEVKARLQKFIHKPGSYIFRLSC-----TRLGQWAIGYVTADGNIL  293 (329)
T ss_dssp             CTTBCTTCCHHHHHHHHGGGTTSTTEEEEEECS-----SSTTSEEEEEECTTSCEE
T ss_pred             CcchhheeeHHHHHHHHHHhcCCCCcEEEEecc-----CccCceEEEEECCCCcee
Confidence            4558899999999999988  788999999997     4569999999874 4444

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=94.72  E-value=0.036  Score=49.23  Aligned_cols=56  Identities=21%  Similarity=0.283  Sum_probs=35.5

Q ss_pred             CCCCCCCCCccCCCcEEEEee--eeCCcCCeEEEEeCCeeee--e---------eccchhhhhhhccCCCCCcccce
Q psy3210         204 FCPTEANQLPLKQGCQVIVLS--KEGEQKGWWKGKIDERVSY--F---------FQLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       204 f~~~~~~ELsl~~Gd~i~v~~--k~ge~~gwW~G~~~g~~G~--f---------P~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      +|..+.+++.|.+     .++  .+|   -.|+|...+.+.+  +         -..|.+|+++|++++|||||+|.
T Consensus        30 ~Wei~~~~l~l~~-----~iG~G~fG---~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~   98 (307)
T 3omv_A           30 YWEIEASEVMLST-----RIGSGSFG---TVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFM   98 (307)
T ss_dssp             CCBCCTTSCCEEE-----ECCCCSSS---EEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             CcEEcHHHeEEee-----EEeeCCCc---EEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence            3445566766532     233  233   3677776543221  1         13588899999999999999985

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=94.31  E-value=0.011  Score=52.46  Aligned_cols=22  Identities=18%  Similarity=-0.022  Sum_probs=20.1

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      ..|.+|+++|++|+|||||+|.
T Consensus        74 ~~f~~E~~il~~l~HpNIV~l~   95 (308)
T 4gt4_A           74 EEFRHEAMLRARLQHPNVVCLL   95 (308)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEE
T ss_pred             HHHHHHHHHHHhCCCCCCCCcc
Confidence            4689999999999999999985

>3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens}

Probab=94.27  E-value=0.05  Score=47.84  Aligned_cols=48  Identities=13%  Similarity=0.252  Sum_probs=40.4

Q ss_pred             cccEeeeeCCHHHHHHhcc--cCCCceEEEEeCCCCCCCCCCCceEEEEeeC-Cee
Q psy3210          87 EYLWFVGEMGREKATSLLE--READGTYLLRIRPQGPTHPNETIYALSLKTD-EKV  139 (272)
Q Consensus        87 ~~~Wf~g~isR~~Ae~lL~--~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~-~~v  139 (272)
                      +++=|.|.|+-+||...|.  ....|+|++|-|..     ..|.|+|++... +.|
T Consensus       227 ~hpGy~aFlTydEV~~~L~~~~~KpGsYIfR~ScT-----rlGqwAIgYV~s~g~I  277 (323)
T 3op0_A          227 NHPGYMAFLTYDEVQERLQACRDKPGSYIFRPSCT-----RLGQWAIGYVSSDGSI  277 (323)
T ss_dssp             TCTTBCTTCCHHHHHHHTTGGGGSTTEEEEEECSS-----STTCEEEEEECTTSCE
T ss_pred             cCcceeeeeeHHHHHHHHHHhccCCCcEEEEeccC-----ccCceEEEEEcCCCce
Confidence            4577899999999999998  67889999999974     469999998774 444

>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium perfringens} PDB: 2kyb_A

Probab=94.15  E-value=0.059  Score=37.65  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=35.1

Q ss_pred             ccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhhhccCCC
Q psy3210         213 PLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRLLSSLFI  260 (272)
Q Consensus       213 sl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~mk~l~h  260 (272)
                      .|.+|+.++++++.+   +|++-+.+|..||+...||+.... .+|.|
T Consensus        28 ~l~~G~~v~vl~~~~---~W~kV~~~g~~GwV~~~yl~~~~~-~~~~~   71 (76)
T 2kt8_A           28 SLSGNTKVTIVGEEG---AFYKIEYKGSHGYVAKEYIKDIKD-EVLEH   71 (76)
T ss_dssp             EECTTCEEEEEEEET---TEEEEEETTEEEEEEGGGEEEEEC-CCCCS
T ss_pred             EECCCCEEEEEEEeC---CEEEEEECCEEEEEEhHHhCcCCC-ccccc
Confidence            466899999998764   699999999999999999987544 33443

>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens}

Probab=93.18  E-value=0.12  Score=35.84  Aligned_cols=39  Identities=18%  Similarity=0.405  Sum_probs=32.7

Q ss_pred             ccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         213 PLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       213 sl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      .+.+|+.++++++.+   +|++-+.+|..||+.+.||+....
T Consensus        26 ~l~~G~~v~v~~~~~---~W~kV~~~g~~GwV~~~yl~~~~~   64 (74)
T 2krs_A           26 TLRNNDKVEIIKEVD---GWYEIRFNGKVGYASKSYITIVNE   64 (74)
T ss_dssp             EEETTCEEEEEEEET---TEEEEEETTEEEEECSSSEEESSS
T ss_pred             EECCCCEEEEEEEeC---CEEEEEECCeEEEEEhHHcCCCCC
Confidence            366899999998764   699999999999999999986543

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=93.00  E-value=0.053  Score=49.06  Aligned_cols=57  Identities=16%  Similarity=-0.027  Sum_probs=33.7

Q ss_pred             CccCCCcEEEEeeeeCCc--CCeEEEEeC--Ce-e--eee---------eccchhhhhhhccCCCCCccccee
Q psy3210         212 LPLKQGCQVIVLSKEGEQ--KGWWKGKID--ER-V--SYF---------FQLYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       212 Lsl~~Gd~i~v~~k~ge~--~gwW~G~~~--g~-~--G~f---------P~~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      +-|..=|..+++++.|++  .-.|++...  |+ .  -.+         ...+.+|+++|++|+|||||+|.-
T Consensus        18 ~~f~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~   90 (350)
T 4b9d_A           18 LYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE   90 (350)
T ss_dssp             CBCSCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cCCCcccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEE
Confidence            334433444556666654  336777654  21 1  111         135778999999999999999864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=92.03  E-value=0.1  Score=45.78  Aligned_cols=21  Identities=19%  Similarity=0.113  Sum_probs=19.4

Q ss_pred             cchhhhhhhccCCCCCcccce
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .|.+|+++|++|+|||||+|.
T Consensus        71 ~~~~E~~il~~l~HpnIV~~~   91 (290)
T 3fpq_A           71 RFKEEAEMLKGLQHPNIVRFY   91 (290)
T ss_dssp             HHHHHHHHHHTCCCTTBCCEE
T ss_pred             HHHHHHHHHHhCCCCCCCcEE
Confidence            478899999999999999985

>2kq8_A Cell WALL hydrolase; GFT protein structure, NESG, PSI, SH3 domain, structural genomics, protein structure initiative; NMR {Bacillus thuringiensis serovarkonkukian}

Probab=92.00  E-value=0.067  Score=36.61  Aligned_cols=37  Identities=30%  Similarity=0.504  Sum_probs=30.9

Q ss_pred             ccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         213 PLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       213 sl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .|.+|+.++++++.+   +|++-+.+|..||+...||.+.
T Consensus        27 ~l~~G~~v~v~~~~~---~W~~V~~~G~~GwV~~~~l~~~   63 (70)
T 2kq8_A           27 ALPQGQKVQVISENS---GWSKINYNGQTGYIGTRYLSKL   63 (70)
T ss_dssp             CCCSSSSCCCCEEET---TEEEEEETTEEEEEETTSCSCC
T ss_pred             EECCCCEEEEEEecC---CEEEEEECCEEEEEEhHHccch
Confidence            466788888887654   6999999999999999999854

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=91.45  E-value=0.071  Score=48.95  Aligned_cols=55  Identities=7%  Similarity=0.036  Sum_probs=34.5

Q ss_pred             ccCCCcEEEEeeeeCCc--CCeEEEEeC--Ce-e--eeee---------ccchhhhhhhccCCCCCcccce
Q psy3210         213 PLKQGCQVIVLSKEGEQ--KGWWKGKID--ER-V--SYFF---------QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       213 sl~~Gd~i~v~~k~ge~--~gwW~G~~~--g~-~--G~fP---------~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .+..||..++++..|.+  .-.|++...  |+ .  -.++         ..++.|+++|++|+|||||+|.
T Consensus        49 ~~~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~  119 (398)
T 4b99_A           49 TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK  119 (398)
T ss_dssp             CCCCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCCCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEe
Confidence            34445544555555543  236887754  21 1  1121         3466799999999999999986

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=91.33  E-value=0.05  Score=47.96  Aligned_cols=22  Identities=18%  Similarity=0.154  Sum_probs=20.0

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .+|.+|+++|++|+|||||+|.
T Consensus        60 ~~f~~E~~il~~l~HpnIV~l~   81 (299)
T 4asz_A           60 KDFHREAELLTNLQHEHIVKFY   81 (299)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEE
T ss_pred             HHHHHHHHHHHhCCCCCCccEE
Confidence            4688999999999999999985

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=90.82  E-value=0.06  Score=48.12  Aligned_cols=22  Identities=27%  Similarity=0.131  Sum_probs=20.1

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .+|.+|+++|++|+|||||+|.
T Consensus        88 ~~f~~E~~il~~l~HpnIV~l~  109 (329)
T 4aoj_A           88 QDFQREAELLTMLQHQHIVRFF  109 (329)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEE
T ss_pred             HHHHHHHHHHHhCCCCCCCcEE
Confidence            3688999999999999999985

>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.58  E-value=0.22  Score=34.68  Aligned_cols=22  Identities=18%  Similarity=0.404  Sum_probs=18.8

Q ss_pred             ccCCCceecCcCCcchhccccc
Q psy3210          18 SRGLRPLCSQACYLACHKQCIP   39 (272)
Q Consensus        18 g~~~qg~~c~~c~~~~h~~c~~   39 (272)
                      .++.+|..|..|+...|+.||.
T Consensus        23 ~~i~~g~~C~~C~h~fH~~Ci~   44 (74)
T 2ct0_A           23 SLLIQGQSCETCGIRMHLPCVA   44 (74)
T ss_dssp             CBCSSSEECSSSCCEECHHHHH
T ss_pred             hHcccCCccCCCCchhhHHHHH
Confidence            3455899999999999999974

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=90.35  E-value=0.14  Score=45.06  Aligned_cols=22  Identities=18%  Similarity=0.024  Sum_probs=19.7

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      ..+.+|+++|++|+|||||++.
T Consensus        48 ~~~~~E~~il~~l~HpnIV~~~   69 (299)
T 4g31_A           48 EKVMREVKALAKLEHPGIVRYF   69 (299)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEE
T ss_pred             HHHHHHHHHHHhCCCCCCCeEE
Confidence            3577899999999999999986

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=88.46  E-value=0.26  Score=44.44  Aligned_cols=23  Identities=9%  Similarity=0.094  Sum_probs=20.1

Q ss_pred             ccchhhhhhhccCCCCCccccee
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      ..+..|+++|++++|||||+|.-
T Consensus       116 ~~~~~Ei~il~~l~HpnIV~l~~  138 (346)
T 4fih_A          116 ELLFNEVVIMRDYQHENVVEMYN  138 (346)
T ss_dssp             GGGHHHHHHHHHCCCTTBCCEEE
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEE
Confidence            35778999999999999999964

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=86.75  E-value=0.35  Score=44.82  Aligned_cols=22  Identities=9%  Similarity=0.072  Sum_probs=19.6

Q ss_pred             cchhhhhhhccCCCCCccccee
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      .+..|+++|++|+|||||+|.-
T Consensus       194 ~~~~Ei~il~~l~HpnIV~l~~  215 (423)
T 4fie_A          194 LLFNEVVIMRDYQHENVVEMYN  215 (423)
T ss_dssp             GHHHHHHHHHHCCCTTBCCEEE
T ss_pred             HHHHHHHHHHhCCCCCCCceEE
Confidence            4678999999999999999864

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=85.90  E-value=0.62  Score=41.72  Aligned_cols=21  Identities=14%  Similarity=-0.168  Sum_probs=18.7

Q ss_pred             chhhhhhhccCCCCCccccee
Q psy3210         248 YWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       248 yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      .++|+++|++|+|||||+|.-
T Consensus        97 ~~~E~~il~~l~HpnIV~l~~  117 (336)
T 4g3f_A           97 RVEELVACAGLSSPRIVPLYG  117 (336)
T ss_dssp             CTHHHHTTTTCCCTTBCCEEE
T ss_pred             HHHHHHHHHhCCCCCCCcEEE
Confidence            468999999999999999864

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=84.90  E-value=0.45  Score=32.80  Aligned_cols=21  Identities=14%  Similarity=0.249  Sum_probs=19.0

Q ss_pred             eeeeeeccCCCCCCCCCccCC
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQ  216 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~  216 (272)
                      ..++|+|||.++..+||+|.+
T Consensus        53 ~~~~alydy~a~~~dElsf~~   73 (77)
T 2jmc_A           53 ELVLALYDYQESGDNAPSYSP   73 (77)
T ss_dssp             CEEEESSCCCCSSCCCCCSCC
T ss_pred             ceEEECCCcCCCCCCccccCC
Confidence            468899999999999999975

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=82.08  E-value=0.43  Score=42.30  Aligned_cols=22  Identities=18%  Similarity=-0.026  Sum_probs=19.4

Q ss_pred             cchhhhhhhccCCCCCccccee
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      .+..|+++|++|+|||||+|..
T Consensus        78 ~~~~E~~il~~l~HpnIv~l~~   99 (311)
T 4aw0_A           78 YVTRERDVMSRLDHPFFVKLYF   99 (311)
T ss_dssp             HHHHHHHHHTTCCCTTBCCEEE
T ss_pred             HHHHHHHHHHhCCCCCCCeEEE
Confidence            3667999999999999999974

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=82.06  E-value=0.37  Score=41.84  Aligned_cols=21  Identities=14%  Similarity=-0.058  Sum_probs=19.0

Q ss_pred             cchhhhhhhccCCCCCcccce
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .+.+|+++|++++|||||++.
T Consensus        59 ~~~~Ei~il~~l~HpnIv~~~   79 (275)
T 3hyh_A           59 RIEREISYLRLLRHPHIIKLY   79 (275)
T ss_dssp             HHHHHHHHHHHCCCTTBCCEE
T ss_pred             HHHHHHHHHHHCCCCCCCeEE
Confidence            467899999999999999986

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=80.91  E-value=0.25  Score=33.86  Aligned_cols=22  Identities=14%  Similarity=0.258  Sum_probs=11.3

Q ss_pred             CCcceeecCccCcCCcccccEeeee
Q psy3210          70 GGNEWTAKSWADHENLSEYLWFVGE   94 (272)
Q Consensus        70 ~~~g~~P~~~~~~~~l~~~~Wf~g~   94 (272)
                      +..||+|+++   ..+..++|||+.
T Consensus        52 g~~G~~P~~y---v~~~~~~w~~~t   73 (74)
T 1gbq_A           52 GKDGFIPKNY---IEMKPHPEFIVT   73 (74)
T ss_dssp             TEEEEEEGGG---EEEEC-------
T ss_pred             CCEEEEehHh---EEEcCCcccccC
Confidence            4468999999   556678999973

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=80.88  E-value=1.3  Score=38.42  Aligned_cols=22  Identities=9%  Similarity=-0.034  Sum_probs=19.3

Q ss_pred             cchhhhhhhccCCCCCccccee
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      .+.+|+++|++++|+|||++.-
T Consensus        80 ~~~~E~~~l~~l~hp~iv~~~~  101 (309)
T 3p86_A           80 EFLREVAIMKRLRHPNIVLFMG  101 (309)
T ss_dssp             HHHHHHHHHHHCCCTTBCCEEE
T ss_pred             HHHHHHHHHHhCCCCCEeeEEE
Confidence            4678999999999999999863

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=80.52  E-value=0.42  Score=42.15  Aligned_cols=22  Identities=14%  Similarity=-0.079  Sum_probs=14.9

Q ss_pred             cchhhhhhhccCCCCCccccee
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      .+..|+++|++++|||||+|.-
T Consensus        72 ~~~~E~~il~~l~HpnIv~l~~   93 (304)
T 3ubd_A           72 RTKMERDILVEVNHPFIVKLHY   93 (304)
T ss_dssp             ------CCCCCCCCTTEECEEE
T ss_pred             HHHHHHHHHHHCCCCCCCeEEE
Confidence            4677999999999999999864

>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*

Probab=80.27  E-value=1.2  Score=34.22  Aligned_cols=30  Identities=30%  Similarity=0.595  Sum_probs=21.6

Q ss_pred             CccCCCcEEEEeeeeCCc--CCeEEEEeCCee
Q psy3210         212 LPLKQGCQVIVLSKEGEQ--KGWWKGKIDERV  241 (272)
Q Consensus       212 Lsl~~Gd~i~v~~k~ge~--~gwW~G~~~g~~  241 (272)
                      ..|..||.|++..+.++.  .|||.|++....
T Consensus        59 ~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~k   90 (128)
T 3h8z_A           59 KEITEGDEVEVYSRANEQEPCGWWLARVRMMK   90 (128)
T ss_dssp             -CCCTTCEEEEEECC---CCCEEEEEEEEEEE
T ss_pred             cCCCCCCEEEEEecCCCCCcCccEEEEEEEee
Confidence            458899999999876532  589999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	272
d1fu6a_	111	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	4e-19
d1qada_	107	d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-a	1e-18
d2c9wa2	103	d.93.1.1 (A:32-134) Suppressor of cytokine signali	2e-15
d1r1qa_	97	d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA	2e-15
d1jwoa_	97	d.93.1.1 (A:) Csk homologous kinase Chk {Human (Ho	4e-15
d1nrva_	105	d.93.1.1 (A:) Growth factor receptor-bound protein	8e-15
d1rpya_	86	d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus nor	3e-14
d1mila_	104	d.93.1.1 (A:) Shc adaptor protein {Human (Homo sap	4e-14
d2eyva1	109	d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo	7e-14
d2qmsa1	113	d.93.1.1 (A:420-532) Growth factor receptor-bound	9e-14
d2shpa3	108	d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Hu	1e-13
d2oq1a1	130	d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70	2e-13
d1k9aa2	101	d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (	3e-13
d1opka2	101	d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (M	5e-13
d1jyra_	96	d.93.1.1 (A:) Growth factor receptor-bound protein	5e-13
d1g83a2	104	d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (H	7e-13
d2shpa2	109	d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Huma	1e-12
d1qcfa2	103	d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {H	2e-12
d2cs0a1	106	d.93.1.1 (A:8-113) Hematopoietic SH2 domain contai	5e-12
d1lkka_	105	d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo	7e-12
d1d4ta_	104	d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sap	8e-12
d1luia_	108	d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mou	8e-12
d1rjaa_	100	d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tu	8e-12
d2fcia1	105	d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (B	2e-11
d1o48a_	106	d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo s	3e-11
d1i3za_	103	d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat	3e-11
d2oq1a2	124	d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-7	6e-11
d1blja_	114	d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mou	8e-11
d2izva2	112	d.93.1.1 (A:274-385) Suppressor of cytokine signal	2e-10
d1a81a1	129	d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Hom	5e-10
d1xa6a2	141	d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal dom	2e-09
d1oota_	58	b.34.2.1 (A:) Hypothetical protein YFR024c {Baker'	5e-09
d1a81a2	125	d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (H	6e-09
d1gria1	56	b.34.2.1 (A:1-56) Growth factor receptor-bound pro	3e-08
d1sema_	58	b.34.2.1 (A:) Growth factor receptor-bound protein	7e-08
d1ujya_	76	b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens	1e-07
d1k4us_	62	b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId	1e-07
d1uhfa_	69	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-07
d1gcqa_	56	b.34.2.1 (A:) Growth factor receptor-bound protein	2e-07
d1u06a1	55	b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chic	2e-07
d1u5sa1	71	b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [Tax	4e-07
d1utia_	57	b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona	6e-07
d1uj0a_	58	b.34.2.1 (A:) Signal transducing adaptor molecule	7e-07
d1ycsb2	63	b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [	9e-07
d1bg1a3	141	d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus)	9e-07
d1efna_	57	b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase,	9e-07
d2hspa_	71	b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (	9e-07
d1uura3	131	d.93.1.1 (A:577-707) STAT homologue {Dictyostelium	1e-06
d1udla_	98	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	2e-06
d1opka1	57	b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domai	2e-06
d1uffa_	93	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	2e-06
d1ng2a2	118	b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic	3e-06
d2iima1	62	b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 d	5e-06
d1jo8a_	58	b.34.2.1 (A:) Actin binding protein ABP1 {Baker's	7e-06
d1j3ta_	74	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	8e-06
d1ugva_	72	b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA062	1e-05
d1fmka1	64	b.34.2.1 (A:82-145) c-src protein tyrosine kinase	1e-05
d1awwa_	67	b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Hom	1e-05
d1bb9a_	83	b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicu	3e-05
d1k9aa1	71	b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (cs	3e-05
d2rn8a1	53	b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus	3e-05
d1i1ja_	106	b.34.2.1 (A:) Melanoma inhibitory activity protein	6e-05
d1arka_	60	b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo	1e-04
d1i07a_	59	b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus	0.001
d1zuua1	56	b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyc	0.001
d1gcqc_	69	b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mu	0.004

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 111

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 78.1 bits (192), Expect = 4e-19
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 81  DHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVK 140
           ++ +L +  W+ G++ RE+    L   ADGT+L+R             Y L+L+     K
Sbjct: 4   NNMSLQDAEWYWGDISREEVNEKLRDTADGTFLVRDASTKM----HGDYTLTLRKGGNNK 59

Query: 141 HMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
            +K++ ++     +Y  S    F S+VELI  Y   SL +    L+V+L  P  +
Sbjct: 60  SIKIFHRD----GKYGFSDPLTFNSVVELINHYRNESLAQYNPKLDVKLLYPVSK 110

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]} Length = 107

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 77.4 bits (190), Expect = 1e-18
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 12/113 (10%)

Query: 83  ENL---SEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKV 139
           E+L    E  W VG   R KA +LL  + DGT+L+R          +  YA S+  D +V
Sbjct: 1   EDLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVR------ESSKQGCYACSVVVDGEV 54

Query: 140 KHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           KH  + +    G    F      + S+ EL+  Y+  SL+++   LNV L  P
Sbjct: 55  KHCVINKTA-TG--YGFAEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYP 104

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (167), Expect = 2e-15
 Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 8/98 (8%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
             L +  W+ G M   +A   L+   +GT+L+R               +S+KT     ++
Sbjct: 10  RELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYL-----LTISVKTSAGPTNL 64

Query: 143 KVYEKE---MDGVPQYFLSQSRYFRSIVELICCYERNS 177
           ++  ++            S+ + F S+V LI  Y +  
Sbjct: 65  RIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMC 102

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.0 bits (166), Expect = 2e-15
 Identities = 20/98 (20%), Positives = 44/98 (44%), Gaps = 9/98 (9%)

Query: 84  NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMK 143
           ++    WF   + R +A +LL  +  G +++R     P       +++S++ ++ V+H K
Sbjct: 2   DIEFPEWFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGD-----FSISVRHEDDVQHFK 56

Query: 144 VYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIEN 181
           V      G    +   +  F S+ +L+  Y   S+ + 
Sbjct: 57  VMRDT-KG---NYFLWTEKFPSLNKLVDYYRTTSISKQ 90

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.3 bits (164), Expect = 4e-15
 Identities = 21/110 (19%), Positives = 48/110 (43%), Gaps = 14/110 (12%)

Query: 85  LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
           LS   WF G++  ++A   L+   DG +L+R      +  +   Y L +     V H +V
Sbjct: 1   LSLMPWFHGKISGQEAVQQLQPPEDGLFLVR-----ESARHPGDYVLCVSFGRDVIHYRV 55

Query: 145 YEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR 194
             ++        + ++ +F ++++++  Y ++        +  +L  P R
Sbjct: 56  LHRD----GHLTIDEAVFFCNLMDMVEHYSKDKG-----AICTKLVRPKR 96

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.5 bits (162), Expect = 8e-15
 Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 13/106 (12%)

Query: 90  WFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           WF G + RE++  +++++   DG +LLR     P       + L+L   +K+K+ ++   
Sbjct: 7   WFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKA-----FVLTLCHHQKIKNFQILPC 61

Query: 148 EMDGVPQYFLSQSR-YFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           E DG   + L      F  +++L+  Y+ N        L  +L+  
Sbjct: 62  EDDGQTFFSLDDGNTKFSDLIQLVDFYQLNKG-----VLPCKLKHH 102

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 64.6 bits (157), Expect = 3e-14
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 12/92 (13%)

Query: 85  LSEYLWFVGEMGREKATSLLEREA---DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKH 141
           LS+Y WF G + R KA  L+        G +++R     P         L+     K KH
Sbjct: 2   LSDYPWFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGE-----CVLTFNFQGKAKH 56

Query: 142 MKVYEKEMDGVPQYFLSQSRYFRSIVELICCY 173
           +++      G       Q  +F+S+ +++  +
Sbjct: 57  LRLSLNG-HG---QCHVQHLWFQSVFDMLRHF 84

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.6 bits (157), Expect = 4e-14
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 13/115 (11%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
             L    WF G++ R +A +LL+   +G +L+R     P       Y L+     + KH+
Sbjct: 2   SQLRGEPWFHGKLSRREAEALLQL--NGDFLVRESTTTPGQ-----YVLTGLQSGQPKHL 54

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF-RQI 196
            + + E         ++   F S+  LI  +  N L     G  + LQ P  R++
Sbjct: 55  LLVDPE-----GVVRTKDHRFESVSHLISYHMDNHLPIISAGSELCLQQPVERKL 104

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 7e-14
 Identities = 22/116 (18%), Positives = 42/116 (36%), Gaps = 24/116 (20%)

Query: 90  WFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE- 148
           W+ G + R++A +LL+ +  G +L+R      +  +   Y LS+  + +V H  +     
Sbjct: 2   WYWGRLSRQEAVALLQGQRHGVFLVR-----DSSTSPGDYVLSVSENSRVSHYIINSSGP 56

Query: 149 ------------MDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
                           P       + F S+  L+  Y+ + L          L  P
Sbjct: 57  RPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDT------TTLIEP 106

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (156), Expect = 9e-14
 Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 13/110 (11%)

Query: 90  WFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           WF G + RE++  L+ ++   DG +L+R   + P       + LSL   +KVKH  +   
Sbjct: 12  WFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQG-----FVLSLCHLQKVKHYLILPS 66

Query: 148 EMDGVPQYFLSQSR-YFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI 196
           E +G   + +   +  F  +++L+  ++ N        L   L+    ++
Sbjct: 67  EEEGRLYFSMDDGQTRFTDLLQLVEFHQLNRG-----ILPCLLRHCCTRV 111

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (154), Expect = 1e-13
 Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 13/110 (11%)

Query: 90  WFVGEMGREKATSLL-EREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           WF G +  ++A  LL E+   G++L+R     P       + LS++T +        + +
Sbjct: 2   WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGD-----FVLSVRTGDDKGESNDGKSK 56

Query: 149 MDGVP------QYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           +  V       +Y +     F S+ +L+  Y++N ++E  +G  ++L+ P
Sbjct: 57  VTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVET-LGTVLQLKQP 105

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 2e-13
 Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 15/113 (13%)

Query: 85  LSEYLWFVGEMGREKATSLLERE--ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
            +   +F G + R +A   L+    ADG +LLR   +         Y LSL  D +  H 
Sbjct: 3   AAHLPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGG-----YVLSLVHDVRFHHF 57

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
            +   E      Y ++  +      EL   Y R+       GL   L+ P  +
Sbjct: 58  PI---ERQLNGTYAIAGGKAHCGPAELCEFYSRDPD-----GLPCNLRKPCNR 102

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 3e-13
 Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 14/108 (12%)

Query: 85  LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
           LS   WF G++ RE+A  LL     G +L+R      +      Y L +  + KV+H ++
Sbjct: 1   LSLMPWFHGKITREQAERLLYPPETGLFLVR-----ESTNYPGDYTLCVSCEGKVEHYRI 55

Query: 145 YEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
                    +  + +  YF ++++L+  Y  ++      GL  RL  P
Sbjct: 56  MYHAS----KLSIDEEVYFENLMQLVEHYTTDAD-----GLCTRLIKP 94

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.6 bits (149), Expect = 5e-13
 Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 13/112 (11%)

Query: 84  NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMK 143
           +L ++ W+ G + R  A  LL    +G++L+R     P        ++SL+ + +V H +
Sbjct: 1   SLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQ-----RSISLRYEGRVYHYR 55

Query: 144 VYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
           +     DG  + ++S    F ++ EL+  +   +      GL   L  P  +
Sbjct: 56  INTAS-DG--KLYVSSESRFNTLAELVHHHSTVAD-----GLITTLHYPAPK 99

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (149), Expect = 5e-13
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 10/93 (10%)

Query: 90  WFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           WF G++ R KA  +L ++  DG +L+R     P       ++LS+K    V+H KV    
Sbjct: 5   WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGD-----FSLSVKFGNDVQHFKVLRDG 59

Query: 149 MDGVPQYFLSQSRYFRSIVELICCYERNSLIEN 181
             G    +      F S+ EL+  +   S+  N
Sbjct: 60  -AG---KYFLWVVKFNSLNELVDYHRSTSVSRN 88

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 7e-13
 Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 10/112 (8%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVK 140
           +++    W+ G++GR+ A   L       GT+L+R         + +I        + VK
Sbjct: 1   DSIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVK 60

Query: 141 HMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           H K+ +        Y+++    F ++ +L+  Y   +      GL+ RL +P
Sbjct: 61  HYKIRK---LDNGGYYITTRAQFETLQQLVQHYSERAA-----GLSSRLVVP 104

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 1e-12
 Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 11/107 (10%)

Query: 90  WFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           WF   +   +A +LL     DG++L R     P         LS++ +  V H+K+    
Sbjct: 5   WFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGD-----LTLSVRRNGAVTHIKIQNTG 59

Query: 149 MDGVPQYFLSQSRYFRSIVELICCYERNSLIENF-IGLNVRLQLPFR 194
                 Y L     F ++ EL+  Y  +        G  + L+ P  
Sbjct: 60  ----DYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLN 102

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 2e-12
 Identities = 21/105 (20%), Positives = 45/105 (42%), Gaps = 10/105 (9%)

Query: 90  WFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           WF   + R+ A   L       G++++R         + ++     +  + VKH K+   
Sbjct: 3   WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTL 62

Query: 148 EMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           +  G   +++S    F ++ EL+  Y++ +      GL  +L +P
Sbjct: 63  DNGG---FYISPRSTFSTLQELVDHYKKGND-----GLCQKLSVP 99

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 5e-12
 Identities = 24/106 (22%), Positives = 39/106 (36%), Gaps = 12/106 (11%)

Query: 90  WFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEM 149
           WF G + RE A +LLE +  G++L+R+            Y LS K      H  V   + 
Sbjct: 11  WFHGAISREDAENLLESQPLGSFLIRVSHSHVG------YTLSYKAQSSCCHFMVKLLDD 64

Query: 150 DGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
                    +     S+  L+  +++  +          L  P RQ
Sbjct: 65  GT--FMIPGEKVAHTSLDALVTFHQQKPI----EPRRELLTQPCRQ 104

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 7e-12
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 14/112 (12%)

Query: 85  LSEYLWFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
           L    WF   + R+ A   L       G++L+R             ++LS++  ++ +  
Sbjct: 1   LEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGS-----FSLSVRDFDQNQGE 55

Query: 143 KV--YEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            V  Y+        +++S    F  + EL+  Y   S      GL  RL  P
Sbjct: 56  VVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASD-----GLCTRLSRP 102

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 8e-12
 Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 13/111 (11%)

Query: 85  LSEYLWFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMK 143
           +     + G++ RE    LL     DG+YLLR     P       Y L +     +   +
Sbjct: 1   MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGV-----YCLCVLYHGYIYTYR 55

Query: 144 VYEKEMDG--VPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           V + E              RYFR I  LI  +++        G+ + LQ P
Sbjct: 56  VSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKPDQ-----GIVIPLQYP 101

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.6 bits (141), Expect = 8e-12
 Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 7/110 (6%)

Query: 84  NLSEYLWFVGEMGREKATSLL-EREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHM 142
           NL  Y W+   + R+KA  LL +   +G +++R      T+         +  +  +KH 
Sbjct: 2   NLETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIKHY 61

Query: 143 KVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
              ++  D   +Y++++   F SI  LI  ++ N       GL  RL+ P
Sbjct: 62  H-IKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNGG-----GLVTRLRYP 105

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 8e-12
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 15/108 (13%)

Query: 90  WFVGEMGREKATSLL--EREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           WF G + R +A   L  E  A G +L+R+  +         Y LS++  + V+H K++ +
Sbjct: 4   WFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSAD-----YVLSVRDTQAVRHYKIWRR 58

Query: 148 EMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
                 +  L+++  F S+ EL+  +   SL        +RL  P R+
Sbjct: 59  AGG---RLHLNEAVSFLSLPELVNYHRAQSL-----SHGLRLAAPCRK 98

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 105

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 56.9 bits (137), Expect = 2e-11
 Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 17/107 (15%)

Query: 90  WFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           W+   + R +A  +L R   DG +L+R R +  +      YA+S + + K+KH +V ++ 
Sbjct: 11  WYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNS------YAISFRAEGKIKHCRVQQEG 64

Query: 149 MDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
                Q  +  +  F S+V+LI  YE++ L        ++L+ P  +
Sbjct: 65  -----QTVMLGNSEFDSLVDLISYYEKHPL-----YRKMKLRYPINE 101

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 3e-11
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 26/122 (21%)

Query: 90  WFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKH--MKVY 145
           W+ G++ R ++  LL       GT+L+R             Y LS+   +  K   +K Y
Sbjct: 7   WYFGKITRRESERLLLNAENPRGTFLVRESETTKGA-----YCLSVSDFDNAKGLNVKHY 61

Query: 146 EKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQIIAVAEFDFC 205
           +        ++++    F S+ +L+  Y +++      GL  RL               C
Sbjct: 62  KIRKLDSGGFYITSRTQFNSLQQLVAYYSKHAD-----GLCHRLTTV------------C 104

Query: 206 PT 207
           PT
Sbjct: 105 PT 106

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 103

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.6 bits (136), Expect = 3e-11
 Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 13/107 (12%)

Query: 90  WFVGEMGREKATSLLEREA-DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKE 148
           ++ G + + +  +LL +   DG +L+R     P         L +   + V   +++ ++
Sbjct: 5   YYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGA-----LCLCVSFKKLVYSYRIFREK 59

Query: 149 MDG--VPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPF 193
                +     +    F ++ EL+  Y +        GL V L  P 
Sbjct: 60  HGYYRIETDAHTPRTIFPNLQELVSKYGKPGQ-----GLVVHLSNPI 101

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 124

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 6e-11
 Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 19/113 (16%)

Query: 82  HENLSEYLWFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKV 139
           HE      W+   + RE+A   L   A  DG +LLR          +  YALSL   + V
Sbjct: 26  HE---RMPWYHSSLTREEAERKLYSGAQTDGKFLLR------PRKEQGTYALSLIYGKTV 76

Query: 140 KHMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
            H  +     D   +Y + +   F ++ +L+   +  +      GL   L+  
Sbjct: 77  YHYLI---SQDKAGKYCIPEGTKFDTLWQLVEYLKLKAD-----GLIYCLKEA 121

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 114

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.9 bits (134), Expect = 8e-11
 Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 11/112 (9%)

Query: 83  ENLSEYLWFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVK 140
           E L    WF   + R+ A   L       G++L+R         + ++        E VK
Sbjct: 7   ETLEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKD-ITTQGEVVK 65

Query: 141 HMKVYEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP 192
           H K+   +  G   Y++S    F ++  L+  Y +        GL  +L LP
Sbjct: 66  HYKIRSLDNGG---YYISPRITFPTLQALVQHYSKKGD-----GLCQKLTLP 109

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]} Length = 112

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 2e-10
 Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 5/98 (5%)

Query: 85  LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKV 144
           ++    + G M +  A +LLE + +GT+LLR   Q        ++++S +   +  H ++
Sbjct: 8   INNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQED-----YLFSVSFRRYSRSLHARI 62

Query: 145 YEKEMDGVPQYFLSQSRYFRSIVELICCYERNSLIENF 182
            +   +           +   I  L+  Y+  S    F
Sbjct: 63  EQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFF 100

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 129

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 5e-10
 Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 15/108 (13%)

Query: 90  WFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           +F G + RE+A   L +    DG YLLR             +ALS+    K  H  +  +
Sbjct: 7   FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGG-----FALSVAHGRKAHHYTIERE 61

Query: 148 EMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ 195
                  Y ++  R   S  +L   + + S      GL   L+ PF +
Sbjct: 62  LNG---TYAIAGGRTHASPADLCHYHSQESD-----GLVCLLKKPFNR 101

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 2e-09
 Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 16/111 (14%)

Query: 78  SWADHENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDE 137
              ++        F G + RE+A  LL    +G Y+LR   + P       Y L+L+   
Sbjct: 25  REVENRPKYYGREFHGIISREQADELLGGV-EGAYILRESQRQPGC-----YTLALRFGN 78

Query: 138 KVKHMKVYEKEMDGVPQYFLSQSRYFRSIVELI----CCYERNSLIENFIG 184
           +  + +++               + F SI +L+          +    +I 
Sbjct: 79  QTLNYRLFHDG------KHFVGEKRFESIHDLVTDGLITLYIETKAAEYIS 123

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.4 bits (118), Expect = 5e-09
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           AVA + F   E+  LP ++G  + +L K   Q  WW G+++ R   F
Sbjct: 4   AVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIF 50

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (121), Expect = 6e-09
 Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 16/109 (14%)

Query: 90  WFVGEMGREKATSLLEREA--DGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEK 147
           WF G++ RE++  ++   +  +G +L+R         N   YAL L  + KV H ++   
Sbjct: 31  WFHGKISREESEQIVLIGSKTNGKFLIR------ARDNNGSYALCLLHEGKVLHYRID-- 82

Query: 148 EMDGVPQYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQI 196
             D   +  + + + F ++ +L+  Y   +      GL   L +P ++I
Sbjct: 83  -KDKTGKLSIPEGKKFDTLWQLVEHYSYKAD-----GLLRVLTVPCQKI 125

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (112), Expect = 3e-08
 Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 1/47 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A+A++DF  T  ++L  K+G  + VL++E +Q  W+K +++ +  + 
Sbjct: 3   AIAKYDFKATADDELSFKRGDILKVLNEECDQ-NWYKAELNGKDGFI 48

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

 Score = 46.2 bits (110), Expect = 7e-08
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A FDF P E+ +L  K+G  + +++K+     WW+G+++ R   F
Sbjct: 5   VQALFDFNPQESGELAFKRGDVITLINKDDP--NWWEGQLNNRRGIF 49

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (109), Expect = 1e-07
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 194 RQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            Q+I  A F+F  T  ++L + +G  + V   E    GWW+G ++ R  +F
Sbjct: 9   HQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEG--GWWEGTLNGRTGWF 57

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (109), Expect = 1e-07
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A F +  T+   L  ++G  ++VLSK  E   W +G+   +V  F
Sbjct: 8   VEALFSYEATQPEDLEFQEGDIILVLSKVNE--EWLEGESKGKVGIF 52

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (109), Expect = 1e-07
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            +A + +   E   L   +G +++V  K+G    WW G I +R   F
Sbjct: 11  YIALYPYSSVEPGDLTFTEGEEILVTQKDG---EWWTGSIGDRSGIF 54

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (107), Expect = 2e-07
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A FDF P E  +L  ++G  + V+        WWKG    +   F
Sbjct: 4   VQALFDFDPQEDGELGFRRGDFIHVMDNSDP--NWWKGACHGQTGMF 48

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 55

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 44.7 bits (106), Expect = 2e-07
 Identities = 9/48 (18%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           + +A +D+      ++ +K+G  + +L+   +   WWK ++++R  + 
Sbjct: 2   LVLALYDYQEKSPREVTMKKGDILTLLNSTNK--DWWKVEVNDRQGFV 47

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (105), Expect = 4e-07
 Identities = 10/49 (20%), Positives = 18/49 (36%), Gaps = 1/49 (2%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGK-IDERVSYF 244
           +    + F      +L  ++G  + V+ K      WWK K    +V   
Sbjct: 8   VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLV 56

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.5 bits (103), Expect = 6e-07
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A A +DF   E ++L  + G  V VL        WW G++  ++  F
Sbjct: 4   ARALYDFEALEEDELGFRSGEVVEVLDSSNP--SWWTGRLHNKLGLF 48

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.1 bits (102), Expect = 7e-07
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A +DF   E N+L  K G  + VL        WW+G+       F
Sbjct: 5   VRALYDFEAVEDNELTFKHGELITVLDDSDA--NWWQGENHRGTGLF 49

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (102), Expect = 9e-07
 Identities = 12/49 (24%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGE-QKGWWKGKIDERVSYF 244
           +  A +D+ P   ++LP+K+G  + ++ +E E +  WW  +++++  Y 
Sbjct: 6   VIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYV 54

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]} Length = 141

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.3 bits (107), Expect = 9e-07
 Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 10/89 (11%)

Query: 90  WFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEM 149
           + +G + +E+  ++L  +  GT+LLR          E     +    +     ++   E 
Sbjct: 9   YIMGFISKERERAILSTKPPGTFLLRF----SESSKEGGVTFTWVEKDISGSTQIQSVEP 64

Query: 150 DGVPQYFLSQSRYFRSIVELICCYERNSL 178
                 +  Q     S  E+I  Y+    
Sbjct: 65  ------YTKQQLNNMSFAEIIMGYKIMDA 87

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (101), Expect = 9e-07
 Identities = 7/48 (14%), Positives = 16/48 (33%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           + VA +D+     + L   +G +  +L+         +        Y 
Sbjct: 2   LFVALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYI 49

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (102), Expect = 9e-07
 Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 192 PFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFF 245
           P  +    A FD+     ++L   +   +  + K+    GWW+G    +   +F
Sbjct: 3   PTFKCAVKALFDYKAQREDELTFIKSAIIQNVEKQEG--GWWRGDYGGKKQLWF 54

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]} Length = 131

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 44.6 bits (105), Expect = 1e-06
 Identities = 12/92 (13%), Positives = 32/92 (34%), Gaps = 5/92 (5%)

Query: 90  WFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEM 149
              G MGR++    L+ +  GT+++R       +P +  + ++    E    +K Y  + 
Sbjct: 11  IIYGYMGRQEVNDALQNQDPGTFIIR---FSERNPGQ--FGIAYIGVEMPARIKHYLVQP 65

Query: 150 DGVPQYFLSQSRYFRSIVELICCYERNSLIEN 181
           +       +   +     + +   +       
Sbjct: 66  NDTAAAKKTFPDFLSEHSQFVNLLQWTKDTNG 97

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (102), Expect = 2e-06
 Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            +A +D+     ++L   +G  + V++K+     WW+G+I+     F
Sbjct: 37  VIAMYDYAANNEDELSFSKGQLINVMNKDDP--DWWQGEINGVTGLF 81

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.0 bits (99), Expect = 2e-06
 Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           + VA +DF  +  N L + +G + + +        W + +      + 
Sbjct: 2   LFVALYDFVASGDNTLSITKG-EKLRVLGYNHNGEWCEAQTKNGQGWV 48

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 2e-06
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
             A + F     +++    G  + V  K   + GW  G       +F
Sbjct: 8   YRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWF 54

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 3e-06
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
            VA   +   E +++ L +G  V V+ K  +  GWW  + D+   YF
Sbjct: 17  YVAIKAYTAVEGDEVSLLEGEAVEVIHKLLD--GWWVIRKDDVTGYF 61

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (96), Expect = 5e-06
 Identities = 9/53 (16%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 192 PFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           P +  + +A   + P+    L  ++G Q+ +L + GE     +     +  + 
Sbjct: 3   PLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEW-WKAQSLTTGQEGFI 54

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.5 bits (95), Expect = 7e-06
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID 238
           A AE+D+   E N+L   +  ++I +    +   WW G+++
Sbjct: 3   ATAEYDYDAAEDNELTFVENDKIINIEFVDD--DWWLGELE 41

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (96), Expect = 8e-06
 Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           A A   +   + N L   +   + VL ++     WW G++     +F
Sbjct: 13  AQALCSWTAKKDNHLNFSKHDIITVLEQQE---NWWFGEVHGGRGWF 56

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (95), Expect = 1e-05
 Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 3/53 (5%)

Query: 192 PFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           PFR+  A A +       ++L    G  V       ++ GW +G ++ +    
Sbjct: 9   PFRK--AKALYACKAEHDSELSFTAG-TVFDNVHPSQEPGWLEGTLNGKTGLI 58

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (94), Expect = 1e-05
 Identities = 7/46 (15%), Positives = 16/46 (34%)

Query: 199 VAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           VA +D+       L  K+G ++ +++               +  Y 
Sbjct: 6   VALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYI 51

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (93), Expect = 1e-05
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYF 244
            VA +D+ P  AN L L++G +  +L +      WW+ +  + +  Y 
Sbjct: 11  VVALYDYMPMNANDLQLRKGDEYFILEESNL--PWWRARDKNGQEGYI 56

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 83

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.6 bits (92), Expect = 3e-05
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 188 RLQLPFRQII-AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQK---GWWKGKID 238
           RL LP   +    A+ D+  T+ ++L LK G  V+V+  +  ++   GW  G  +
Sbjct: 4   RLDLPPGFMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKE 58

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (91), Expect = 3e-05
 Identities = 9/48 (18%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFF 245
            +A+++F  T    LP  +G  + +++   +   W+K K         
Sbjct: 9   CIAKYNFHGTAEQDLPFCKGDVLTIVAVT-KDPNWYKAKNKVGREGII 55

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

 Score = 38.7 bits (90), Expect = 3e-05
 Identities = 7/47 (14%), Positives = 18/47 (38%), Gaps = 2/47 (4%)

Query: 199 VAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFF 245
           +A +D+   +  +L L+   +  +L        WW+ +       + 
Sbjct: 2   IALYDYQTNDPQELALRCDEEYYLLDSSEI--HWWRVQDKNGHEGYA 46

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 6e-05
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSK-EGEQKGWWKGKIDERVSYFFQLYWGNF 252
           +AVA  D+   +   L + +G  V V SK +G  + +W G +            G F
Sbjct: 23  MAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYF 79

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 1e-04
 Identities = 9/48 (18%), Positives = 19/48 (39%)

Query: 197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYF 244
           I  A +D+   +A+++  K G  +I +    E   +   +   R    
Sbjct: 5   IFRAMYDYMAADADEVSFKDGDAIINVQAIDEGWMYGTVQRTGRTGML 52

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 59

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.5 bits (79), Expect = 0.001
 Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFF 245
           A +++DF    +++L + +   + +L     ++ WWK +     S F 
Sbjct: 4   AKSKYDFVARNSSELSVMKDDVLEILDD---RRQWWKVRNASGDSGFV 48

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.1 bits (78), Expect = 0.001
 Identities = 1/48 (2%), Positives = 16/48 (33%)

Query: 198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFF 245
               + +   + +++ +  G ++ +++++               +   
Sbjct: 2   NKVLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLV 49

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.9 bits (75), Expect = 0.004
 Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 3/48 (6%)

Query: 199 VAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYF 244
                        L L  G  V +   E  +  WW+G+      V +F
Sbjct: 14  YGIPPPPGAFGPFLRLNPGDIVELTKAE-AEHNWWEGRNTATNEVGWF 60

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	272
d1opka2	101	Abl tyrosine kinase {Mouse (Mus musculus) [TaxId:	99.93
d1jwoa_	97	Csk homologous kinase Chk {Human (Homo sapiens) [T	99.93
d1k9aa2	101	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.92
d1rjaa_	100	Tyrosine-protein kinase 6 (Breast tumor kinase, Br	99.92
d1lkka_	105	p56-lck tyrosine kinase {Human (Homo sapiens) [Tax	99.91
d1a81a2	125	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.91
d1blja_	114	P55 Blk protein tyrosine kinase {Mouse (Mus muscul	99.91
d1qada_	107	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.91
d1a81a1	129	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	99.91
d1i3za_	103	Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus	99.91
d1nrva_	105	Growth factor receptor-bound protein 10, GRB10 {Hu	99.91
d2oq1a1	130	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.91
d1o48a_	106	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.91
d1g83a2	104	Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId:	99.9
d2oq1a2	124	Tyrosine-protein kinase zap-70 {Human (Homo sapien	99.9
d1mila_	104	Shc adaptor protein {Human (Homo sapiens) [TaxId:	99.9
d2qmsa1	113	Growth factor receptor-bound protein 7 {Human (Hom	99.9
d1d4ta_	104	The Xlp protein Sap {Human (Homo sapiens) [TaxId:	99.9
d1qcfa2	103	Hemopoetic cell kinase Hck {Human (Homo sapiens) [	99.9
d1r1qa_	97	GRB2-related adaptor protein 2 (MONA, GRID) {Mouse	99.89
d2fcia1	105	Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId:	99.89
d1luia_	108	Itk/tsk protein tyrosine kinase {Mouse (Mus muscul	99.89
d1jyra_	96	Growth factor receptor-bound protein 2 (GRB2) {Hum	99.89
d1fu6a_	111	Phosphatidylinositol 3-kinase, p85-alpha subunit {	99.89
d2izva2	112	Suppressor of cytokine signaling 4, SOCS-4 {Human	99.89
d2shpa2	109	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.89
d1rpya_	86	Adaptor protein Aps {Rat (Rattus norvegicus) [TaxI	99.86
d2cs0a1	106	Hematopoietic SH2 domain containing protein HSH2D	99.86
d2eyva1	109	Crk proto-oncogen {Human (Homo sapiens) [TaxId: 96	99.86
d2shpa3	108	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	99.85
d2c9wa2	103	Suppressor of cytokine signaling 2, SOCS-2 {Human	99.85
d1xa6a2	141	Beta-chimaerin, N-terminal domain {Human (Homo sap	99.74
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	99.61
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.6
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	99.6
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	99.6
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	99.59
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	99.58
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.57
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	99.57
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.54
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.54
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	99.53
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.52
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	99.52
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	99.51
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	99.5
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	99.5
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.5
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	99.5
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	99.49
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.48
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	99.48
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	99.47
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	99.47
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.47
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.46
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.45
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	99.45
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.45
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	99.45
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	99.44
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.43
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	99.43
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.43
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	99.43
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	99.43
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.42
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	99.42
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	99.42
d1kjwa1	96	Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}	99.42
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	99.41
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	99.41
d1uura3	131	STAT homologue {Dictyostelium discoideum [TaxId: 4	99.4
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	99.39
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	99.39
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	99.37
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	99.37
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	99.36
d1bg1a3	141	STAT3b {Mouse (Mus musculus) [TaxId: 10090]}	99.33
d1t0ha_	96	SH3-like domain of the L-type calcium channel {Rab	99.32
d1vyva1	145	SH3-like domain of the L-type calcium channel {Rat	99.12
d1vyua1	136	SH3-like domain of the L-type calcium channel {Rat	98.86
d1ptqa_	50	Protein kinase C-delta (PKCdelta) {Mouse (Mus musc	97.68
d1xa6a3	62	Beta-chimaerin, middle domain {Human (Homo sapiens	97.63
d1tbna_	66	Protein kinase c-gamma {Rat (Rattus rattus) [TaxId	97.59
d1kbea_	49	Kinase suppressor of Ras, Ksr {Mouse (Mus musculus	97.55
d1bf5a3	142	STAT-1 {Human (Homo sapiens) [TaxId: 9606]}	96.99
d1faqa_	52	RAF-1 {Human (Homo sapiens) [TaxId: 9606]}	96.87
d1r79a_	84	Diacylglycerol kinase delta {Human (Homo sapiens)	96.42
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	94.25
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	93.86
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	93.03
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	92.71
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	92.55
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	92.3
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	92.12
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	91.63
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	91.54
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	91.33
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	89.32
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	89.29
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	89.13
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	89.1
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	88.55
d1ri9a_	77	Fyn-binding protein (T-cell adapter protein adap)	88.24
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	88.02
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	87.46
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	86.43
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	85.61
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	85.45
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	85.44
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	84.89
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	84.68
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	84.12
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	84.05
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	82.86
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	81.87
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	81.05
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	80.92
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	80.64
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	80.07

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.5e-26  Score=174.29  Aligned_cols=99  Identities=22%  Similarity=0.410  Sum_probs=90.0

Q ss_pred             CcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeeccccc
Q psy3210          84 NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYF  163 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F  163 (272)
                      +|+.++||||.|+|++||.+|.+.++|+||||+|++.     ++.|+||++.++.|+||+|....+|   .|++.+...|
T Consensus         1 sLe~~~Wy~g~isR~eAe~lL~~~~~G~FLVR~S~~~-----~~~~~LSv~~~~~v~H~~I~~~~~g---~~~~~~~~~F   72 (101)
T d1opka2           1 SLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESS-----PGQRSISLRYEGRVYHYRINTASDG---KLYVSSESRF   72 (101)
T ss_dssp             SGGGSTTEEEECCHHHHHHHGGGCCTTEEEEEECSSS-----TTCEEEEEEETTEEEEEECEECTTS---CEESSTTSCB
T ss_pred             CcccCcccCCCCCHHHHHHHhcCCCCCeEEEEecCCC-----CCCEEEEEEcCcceEEEEeEECCCC---CEEeCCCccc
Confidence            4788999999999999999999989999999999744     5899999999999999999988776   7888888889


Q ss_pred             chhhhhhhhhhcccccccccccccccccccee
Q psy3210         164 RSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       164 ~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      +||.+||+||+.++     +++.+.|+.|+++
T Consensus        73 ~sl~~LI~~y~~~~-----~~l~~~L~~P~pr   99 (101)
T d1opka2          73 NTLAELVHHHSTVA-----DGLITTLHYPAPK   99 (101)
T ss_dssp             SSHHHHHHHHTTCC-----TTSSSCCCEECCC
T ss_pred             CCHHHHHHHHhhCC-----CCCceECCCccCC
Confidence            99999999999988     6889999999864

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.7e-26  Score=172.80  Aligned_cols=97  Identities=22%  Similarity=0.448  Sum_probs=86.8

Q ss_pred             cccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccc
Q psy3210          85 LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFR  164 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~  164 (272)
                      |+.+|||||.|+|++||++|++.++|+||||+|++.     ++.|+|||+.+++|+||+|.+.++    .|++.+...|+
T Consensus         1 ls~~PWy~g~isR~eAe~~L~~~~~G~FLVR~S~~~-----~g~~vLSv~~~~~v~H~~I~~~~~----~~~~~~~~~F~   71 (97)
T d1jwoa_           1 LSLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARH-----PGDYVLCVSFGRDVIHYRVLHRDG----HLTIDEAVFFC   71 (97)
T ss_dssp             CTTCTTEEESCCHHHHHHHTCSCCTTCEEEEECSSS-----TTCEEEEEEETTEEEEEEEEESSS----EESSTTSCCBS
T ss_pred             CCcCCccCCCCCHHHHHHHhcCCCCCeEEEEecCCC-----CccEEEEEEecCceEEEEEEEcCC----cEEecCCcccC
Confidence            467899999999999999999989999999999744     589999999999999999987544    68888888999


Q ss_pred             hhhhhhhhhhcccccccccccccccccccee
Q psy3210         165 SIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       165 sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      ||.+||+||+.++     +++.+.|..|+++
T Consensus        72 sl~~LI~~y~~~~-----~~L~~~L~~P~~k   97 (97)
T d1jwoa_          72 NLMDMVEHYSKDK-----GAICTKLVRPKRK   97 (97)
T ss_dssp             CHHHHHHHHHHCC-----TTSSSCCCCBCCC
T ss_pred             CHHHHHHHHhhCC-----CCCCccCCccCcC
Confidence            9999999999988     6899999999853

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.9e-26  Score=170.98  Aligned_cols=97  Identities=28%  Similarity=0.464  Sum_probs=86.9

Q ss_pred             cccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccc
Q psy3210          85 LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFR  164 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~  164 (272)
                      |+.+|||||.|+|++||++|.+.++|+||||+|++.     ++.|+||++.+++|+||+|...++    .|++.+...|+
T Consensus         1 l~~~PWy~g~isR~~Ae~lL~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~----~~~~~~~~~F~   71 (101)
T d1k9aa2           1 LSLMPWFHGKITREQAERLLYPPETGLFLVRESTNY-----PGDYTLCVSCEGKVEHYRIMYHAS----KLSIDEEVYFE   71 (101)
T ss_dssp             EESCTTBCTTCCHHHHHHHTCSCCTTEEEEEECSSS-----TTSEEEEEECSSSEEEEEEEEETT----EEESSSSSCBS
T ss_pred             CCcCCccCCCCCHHHHHHHHcCCCCCCEEEeccCCC-----CCCEEEEEEeCCccEEEEEEEcCC----CceecCCcccC
Confidence            456899999999999999999889999999999644     589999999999999999988765    68888778899


Q ss_pred             hhhhhhhhhhcccccccccccccccccccee
Q psy3210         165 SIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       165 sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      ||.+||+||+.++     +++.+.|..|+.+
T Consensus        72 sl~~LV~~y~~~~-----~gl~~~L~~P~~~   97 (101)
T d1k9aa2          72 NLMQLVEHYTTDA-----DGLCTRLIKPKVM   97 (101)
T ss_dssp             SHHHHHHHHHHCC-----TTSSSCCCEECCC
T ss_pred             CHHHHHHHHhhCC-----CCCceeCCccccC
Confidence            9999999999988     7899999999853

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8.4e-26  Score=169.85  Aligned_cols=96  Identities=27%  Similarity=0.516  Sum_probs=85.6

Q ss_pred             cccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccc
Q psy3210          87 EYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFR  164 (272)
Q Consensus        87 ~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~  164 (272)
                      ++|||||.|+|++||++|..  .++|+||||+|++.     ++.|+|||+.+++|+||+|...+++   .|++.+...|+
T Consensus         1 sepWy~g~isR~~Ae~~L~~~~~~~G~FLvR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~g---~~~l~~~~~F~   72 (100)
T d1rjaa_           1 SEPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKP-----SADYVLSVRDTQAVRHYKIWRRAGG---RLHLNEAVSFL   72 (100)
T ss_dssp             CCCCBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSS-----SSCEEEEECTTSSCEEEEEEECSSS---CEEEETTEEES
T ss_pred             CCCCcCCCCCHHHHHHHHhccCCCCCeEEeecCCCC-----CCCEEEEEEcCCCceEEEEEECCCC---CEEecCCCccC
Confidence            37999999999999999964  57899999999744     5899999999999999999987776   79998888899


Q ss_pred             hhhhhhhhhhcccccccccccccccccccee
Q psy3210         165 SIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       165 sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      ||.+||+||+.++     .++.+.|+.||++
T Consensus        73 sl~~LV~~y~~~~-----~~~~~~L~~Pc~~   98 (100)
T d1rjaa_          73 SLPELVNYHRAQS-----LSHGLRLAAPCRK   98 (100)
T ss_dssp             SHHHHHHHHHHCC-----TTSSSCCCSBCCC
T ss_pred             CHHHHHHHHhhCC-----CCCccCcCeecCC
Confidence            9999999999998     4688899999864

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3e-25  Score=168.18  Aligned_cols=97  Identities=27%  Similarity=0.458  Sum_probs=84.9

Q ss_pred             cccccEeeeeCCHHHHHHhcc--cCCCceEEEEeCCCCCCCCCCCceEEEEeeCC-----eeeEEEEEEecCCCcceEEe
Q psy3210          85 LSEYLWFVGEMGREKATSLLE--READGTYLLRIRPQGPTHPNETIYALSLKTDE-----KVKHMKVYEKEMDGVPQYFL  157 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~--~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~-----~v~H~~I~~~~~g~~~~~~i  157 (272)
                      ++.++||||.|+|++||++|.  ..++|+||||+|++.     ++.|+||++..+     .|+|++|...+++   .|++
T Consensus         1 le~~pWy~g~isR~eAe~~L~~~~~~~GtFLVR~S~~~-----~g~~~lsv~~~~~~~~~~v~h~~i~~~~~~---~~~~   72 (105)
T d1lkka_           1 LEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESEST-----AGSFSLSVRDFDQNQGEVVKHYKIRNLDNG---GFYI   72 (105)
T ss_dssp             CCCCTTBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSS-----TTCEEEEEEEEETTTEEEEEEEEEEECTTS---CEES
T ss_pred             CccCCccCCCCCHHHHHHHHHhcCCCCCcEEEEccCCC-----CCCEEEEEEEcccCCCccEEEEEEEEcCCC---CEEe
Confidence            467899999999999999994  468999999999744     589999998743     4999999987776   7999


Q ss_pred             ecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         158 SQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       158 ~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      .+...|+||.+||+||+.++     ++|++.|+.||+
T Consensus        73 ~~~~~F~sl~~LV~~y~~~~-----~gL~~~L~~Pcp  104 (105)
T d1lkka_          73 SPRITFPGLHELVRHYTNAS-----DGLCTRLSRPCQ  104 (105)
T ss_dssp             STTSCBSSHHHHHHHHHHCC-----TTSSSCCCSBCC
T ss_pred             cCCcccCCHHHHHHHHhhCC-----CCCCccCCCcCC
Confidence            88888999999999999998     689999999985

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.3e-25  Score=170.46  Aligned_cols=99  Identities=23%  Similarity=0.481  Sum_probs=88.0

Q ss_pred             CCcccccEeeeeCCHHHHHHhcc--cCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLE--READGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS  160 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~--~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~  160 (272)
                      ..++.+|||||.|+|++||++|.  +.++|+||||+|+.      ++.|+|||+.+++|+||+|...++|   .|++.+.
T Consensus        24 ~~he~~pWyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~------~~~yvLSv~~~~~v~H~~I~~~~~g---~~~~~~~   94 (125)
T d1a81a2          24 TAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDN------NGSYALCLLHEGKVLHYRIDKDKTG---KLSIPEG   94 (125)
T ss_dssp             TSGGGSTTEEEECCHHHHHHHHHSSCCCTTCEEEEECSS------SSCEEEEEEETTEEEEEEEEECTTS---CEECTTS
T ss_pred             cccccCCccCCCCCHHHHHHHHHhcCCCCceEEEEecCC------CCCEEEEeeccccceeEeeeEcCCC---cEeccCC
Confidence            56788899999999999999994  46889999999852      4889999999999999999987776   7888877


Q ss_pred             cccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         161 RYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      ..|+||.+||+||+.++     ++|.+.|+.||.+
T Consensus        95 ~~F~sL~~LI~~y~~~~-----~gL~~~L~~P~~k  124 (125)
T d1a81a2          95 KKFDTLWQLVEHYSYKA-----DGLLRVLTVPCQK  124 (125)
T ss_dssp             CCBSCHHHHHHHHTTCC-----TTSSSCCCCBCCC
T ss_pred             cccCCHHHHHHHHhhCC-----CCCCccCCeeCCC
Confidence            78999999999999887     7899999999864

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=4.8e-25  Score=169.49  Aligned_cols=103  Identities=29%  Similarity=0.476  Sum_probs=89.9

Q ss_pred             cCcCCcccccEeeeeCCHHHHHHhcc--cCCCceEEEEeCCCCCCCCCCCceEEEEee----CCeeeEEEEEEecCCCcc
Q psy3210          80 ADHENLSEYLWFVGEMGREKATSLLE--READGTYLLRIRPQGPTHPNETIYALSLKT----DEKVKHMKVYEKEMDGVP  153 (272)
Q Consensus        80 ~~~~~l~~~~Wf~g~isR~~Ae~lL~--~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~----~~~v~H~~I~~~~~g~~~  153 (272)
                      |+..+++.++||||.|+|++||++|.  ..++|+||||+|+.     .++.|+||++.    +..|+||+|...++|   
T Consensus         4 ap~~~l~~e~Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~-----~~g~~~Lsv~~~~~~~~~v~H~~i~~~~~g---   75 (114)
T d1blja_           4 APVETLEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESES-----NKGAFSLSVKDITTQGEVVKHYKIRSLDNG---   75 (114)
T ss_dssp             CSSCCSCCSSSBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTT-----CSSCEEEEECBCCTTTCBCCCEEEEEETTT---
T ss_pred             CCcCccccCCCcCCCCCHHHHHHHHHhcCCCCceEEEeccCC-----CCCCeEEEEEeeccCCCEEEEEEEEEcCCC---
Confidence            45578999999999999999999884  36899999999964     46999999985    356999999998777   


Q ss_pred             eEEeecccccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         154 QYFLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       154 ~~~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      .|++.+...|+||.|||+||++++     ++|.++|+.||.+
T Consensus        76 ~~~l~~~~~F~sl~eLV~~y~~~~-----~gL~~~L~~PC~~  112 (114)
T d1blja_          76 GYYISPRITFPTLQALVQHYSKKG-----DGLCQKLTLPCVN  112 (114)
T ss_dssp             EEEEETTEEESSHHHHHHHHHHCC-----SSSSSCCCCCSCC
T ss_pred             CEEecCCceECCHHHHHHHHhhCC-----CCCCccCCccCcC
Confidence            899988888999999999999998     6899999999854

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.91  E-value=5.3e-25  Score=167.39  Aligned_cols=101  Identities=33%  Similarity=0.494  Sum_probs=89.3

Q ss_pred             CcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeeccccc
Q psy3210          84 NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYF  163 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F  163 (272)
                      .++.++||||.|+|++||++|.+.++|+||||.|+      .++.|+||++.+++|+||+|...+++   .|.+.....|
T Consensus         5 ~~~~~~Wy~g~isR~eAe~lL~~~~~G~FLVR~S~------~~~~y~Lsv~~~~~v~H~~I~~~~~g---~~~~~~~~~F   75 (107)
T d1qada_           5 HHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESS------KQGCYACSVVVDGEVKHCVINKTATG---YGFAEPYNLY   75 (107)
T ss_dssp             GGSGGGTEEEECCHHHHHHHHTTCCTTEEEEEEC---------CCEEEEEEETTEEEEEEEEEETTE---EESSTTCCCB
T ss_pred             ccCCCcccCCCCCHHHHHHHHcCCCCCcEEEEecC------CCCCEEEEEEecCCeEEEEEEECCCC---eEEcCCCCcc
Confidence            46778999999999999999998899999999994      25889999999999999999988775   6666666789


Q ss_pred             chhhhhhhhhhccccccccccccccccccc
Q psy3210         164 RSIVELICCYERNSLIENFIGLNVRLQLPF  193 (272)
Q Consensus       164 ~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~  193 (272)
                      +||.+||+||++++|.....++.++|+.|+
T Consensus        76 ~sl~~LI~~Y~~~~l~~~~~~l~~~L~~Pv  105 (107)
T d1qada_          76 SSLKELVLHYQHTSLVQHNDSLNVTLAYPV  105 (107)
T ss_dssp             SSHHHHHHHHHHSCGGGTCTTCCCCCCEET
T ss_pred             CCHHHHHHHHHhCccccccCCCceEccccc
Confidence            999999999999999988889999999886

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.6e-25  Score=172.04  Aligned_cols=98  Identities=28%  Similarity=0.374  Sum_probs=87.2

Q ss_pred             cccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          85 LSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      ...+|||||.|+|++||++|..  .++|+||||+|++.     ++.|+|||+.++.|+||+|.+..+|   +|++.....
T Consensus         2 ~~~~PWyhg~isR~~Ae~lL~~~g~~dG~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~g---~~~i~~~~~   73 (129)
T d1a81a1           2 ANHLPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNY-----LGGFALSVAHGRKAHHYTIERELNG---TYAIAGGRT   73 (129)
T ss_dssp             TTSSTTBCSSCCHHHHHHHHHHTTCCTTEEEEEECSSS-----TTCEEEEEEETTEEEEEEEEECTTS---CEEETTSCC
T ss_pred             CCCCCcccCCCCHHHHHHHHHhcCCCCccEEEEccCCC-----CcceEEEeeecccceEEEEEEcCCC---CeeecCCcc
Confidence            3567999999999999999965  47899999999744     5899999999999999999987776   799988878


Q ss_pred             cchhhhhhhhhhcccccccccccccccccccee
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      |+||.+||+||+.++     +++.+.|..|+.+
T Consensus        74 F~sl~eLV~~Y~~~~-----~gl~~~L~~P~~~  101 (129)
T d1a81a1          74 HASPADLCHYHSQES-----DGLVCLLKKPFNR  101 (129)
T ss_dssp             BSSHHHHHHHHTTCC-----TTSSSCCCEECCC
T ss_pred             cCCHHHHHHHHhhCC-----CCCcccCCCCCCC
Confidence            999999999999988     7999999999854

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=8.9e-25  Score=165.05  Aligned_cols=95  Identities=20%  Similarity=0.378  Sum_probs=82.4

Q ss_pred             cccEeeeeCCHHHHHHhcc-cCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc-----
Q psy3210          87 EYLWFVGEMGREKATSLLE-READGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS-----  160 (272)
Q Consensus        87 ~~~Wf~g~isR~~Ae~lL~-~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~-----  160 (272)
                      ++|||||.|+|++||.+|. ..++|+||||+|++.     ++.|+||++.++.|+||+|.+.+++   .|++...     
T Consensus         2 d~PWy~g~isR~~AE~lL~~~~~~G~FLVR~S~~~-----~g~~~LSv~~~~~v~H~~I~~~~~g---~~~~~~~~~~~~   73 (103)
T d1i3za_           2 DLPYYHGCLTKRECEALLLKGGVDGNFLIRDSESV-----PGALCLCVSFKKLVYSYRIFREKHG---YYRIETDAHTPR   73 (103)
T ss_dssp             CCTTEESSCCHHHHHHHHHTTCSTTEEEEEECSSS-----TTCEEEEEECSSSEEEEEEEECTTS---CEEECBCTTSCC
T ss_pred             CCCcccCCCCHHHHHHHHHhCCCCCeEEEEecCCC-----CCCEEEEEEeCCeEEEEEeEEcCCC---cEEEeccCCcCc
Confidence            5799999999999999994 568899999999744     5899999999999999999887766   7877543     


Q ss_pred             cccchhhhhhhhhhccccccccccccccccccce
Q psy3210         161 RYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      ..|+||.+||+||+.++     +++.+.|..|+.
T Consensus        74 ~~F~sl~~LV~~y~~~~-----~gl~~~L~~P~~  102 (103)
T d1i3za_          74 TIFPNLQELVSKYGKPG-----QGLVVHLSNPIM  102 (103)
T ss_dssp             CEESSSHHHHHHTTSSS-----SSSSSCCCEECC
T ss_pred             cccCCHHHHHHHhhhCC-----CCCeEeCCcccc
Confidence            36999999999999887     688899999875

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.6e-25  Score=165.67  Aligned_cols=100  Identities=24%  Similarity=0.434  Sum_probs=81.7

Q ss_pred             cccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec-cc
Q psy3210          85 LSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ-SR  161 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~-~~  161 (272)
                      +++++||||.|+|++||++|.+  .++|+||||+|++.     ++.|+|||+.+++|+||+|...+++....|.+.+ ..
T Consensus         2 h~~~~Wyhg~isR~~Ae~lL~~~g~~dG~FLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~   76 (105)
T d1nrva_           2 HRTQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSN-----PKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNT   76 (105)
T ss_dssp             CTTSTTBCTTCCHHHHHHHHHHTTCCTTEEEEEECSSC-----TTCEEEEEEETTEEEEEEEEEC-----CCEESSTTSS
T ss_pred             CccCcccCCCCCHHHHHHHHhhcCCCCceEEEEeCCCC-----CCCEEEEEEECCceeEEEEEEecCCCeEEEEECCCCc
Confidence            4678999999999999999964  57899999999754     5889999999999999999876543222456654 34


Q ss_pred             ccchhhhhhhhhhccccccccccccccccccce
Q psy3210         162 YFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       162 ~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      .|+||.+||+||+.++     .+|.+.|..||.
T Consensus        77 ~F~sl~~LV~~y~~~~-----~~L~~~L~~Pc~  104 (105)
T d1nrva_          77 KFSDLIQLVDFYQLNK-----GVLPCKLKHHCI  104 (105)
T ss_dssp             CBSSHHHHHHHHTTCC-----TTSSSCCCEECC
T ss_pred             ccCCHHHHHHHhccCc-----CCCCccCCcCCC
Confidence            7999999999999988     688999999985

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.2e-24  Score=170.91  Aligned_cols=98  Identities=27%  Similarity=0.375  Sum_probs=87.0

Q ss_pred             cccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          85 LSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      .+.+|||||.|+|++||++|+.  .++|+||||+|++.     ++.|+||++.+++|+||+|....+|   .|++.+...
T Consensus         3 ~~~~pWy~g~i~R~~Ae~~L~~~g~~~G~FLVR~S~~~-----~g~yvLSv~~~~~v~H~~I~~~~~g---~~~l~~~~~   74 (130)
T d2oq1a1           3 AAHLPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRS-----LGGYVLSLVHDVRFHHFPIERQLNG---TYAIAGGKA   74 (130)
T ss_dssp             TTTCTTBCBSCCHHHHHHHHHHTTCCTTCEEEEECSSS-----TTCEEEEEEETTEEEEEEEEECTTS---CEEETTSCC
T ss_pred             ccCCCCccCCCCHHHHHHHHHhcCCCCceEEEEecCCC-----CccEEEEEeeCCceEEEEEEEcCCC---ceeccCCCC
Confidence            3456999999999999999974  48899999999744     5899999999999999999887666   799988778


Q ss_pred             cchhhhhhhhhhcccccccccccccccccccee
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      |+||.+||+||+.++     ++|.+.|..|+.+
T Consensus        75 F~sl~~Lv~~Y~~~~-----~gL~~~L~~P~~r  102 (130)
T d2oq1a1          75 HCGPAELCEFYSRDP-----DGLPCNLRKPCNR  102 (130)
T ss_dssp             BSSHHHHHHHHHHCC-----TTSSSCCCSBCCC
T ss_pred             cCCHHHHHHHHhhCC-----CCCCccCCccCCC
Confidence            999999999999988     7899999999965

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.5e-24  Score=164.52  Aligned_cols=98  Identities=24%  Similarity=0.472  Sum_probs=85.7

Q ss_pred             CcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeC-----CeeeEEEEEEecCCCcceEE
Q psy3210          84 NLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTD-----EKVKHMKVYEKEMDGVPQYF  156 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~-----~~v~H~~I~~~~~g~~~~~~  156 (272)
                      +++.++||||.|+|++||++|.+  .++|+||||+|++.     ++.|+||++..     ..|+|++|...++|   .|+
T Consensus         1 ~l~~~~Wy~g~i~R~eAe~lL~~~~~~~G~FLVR~S~~~-----~g~y~LSv~~~~~~~~~~i~h~~i~~~~~g---~~~   72 (106)
T d1o48a_           1 SIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETT-----KGAYCLSVSDFDNAKGLNVKHYKIRKLDSG---GFY   72 (106)
T ss_dssp             CGGGSTTEEESCCHHHHHHHHCCTTCCTTCEEEEECSSS-----TTCEEEEEEEEETTTEEEEEEEEEEECTTS---CEE
T ss_pred             CcccCCccCCCCCHHHHHHHHHhcCCCCCcEEEEcccCC-----CCCEEEEEEecccCcccceEEEEEEEecCC---CEE
Confidence            46889999999999999999954  57999999999744     58999999874     36889999887776   799


Q ss_pred             eecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         157 LSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       157 i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      +.+...|+||.|||+||+.++     ++|.++|..||+
T Consensus        73 ~~~~~~F~sl~eLV~~y~~~~-----~gL~~~L~~pcP  105 (106)
T d1o48a_          73 ITSRTQFNSLQQLVAYYSKHA-----DGLCHRLTTVCP  105 (106)
T ss_dssp             SSTTSEESSHHHHHHHHTTCC-----TTSSSCCCSBCC
T ss_pred             EcCCeeECCHHHHHHHHhhCC-----CCCCccCCCcCC
Confidence            988888999999999999998     689999999985

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.6e-24  Score=163.79  Aligned_cols=96  Identities=27%  Similarity=0.591  Sum_probs=84.4

Q ss_pred             CcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEee-----CCeeeEEEEEEecCCCcceEE
Q psy3210          84 NLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKT-----DEKVKHMKVYEKEMDGVPQYF  156 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~-----~~~v~H~~I~~~~~g~~~~~~  156 (272)
                      +++.++||||.|+|++||++|..  .++|+||||+|++.     ++.|+||++.     ++.|+|++|...+++   .|+
T Consensus         2 ~l~~~~Wy~g~i~R~eAe~~L~~~g~~~G~FLVR~S~~~-----~g~~~Lsv~~~~~~~~~~v~h~~i~~~~~g---~~~   73 (104)
T d1g83a2           2 SIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETT-----KGAYSLSIRDWDDMKGDHVKHYKIRKLDNG---GYY   73 (104)
T ss_dssp             SGGGSSSBCTTCCHHHHHHHHHSTTCCTTCEEEEECSSS-----TTCEEEEEEEECSSSCEEEEEEEEEECTTS---CEE
T ss_pred             ccccCCCcCCCCCHHHHHHHHHhcCCCCCcEEEeccCCC-----CCCeEEEEEEeecCcCCeEEEEEEEEcCCC---CEE
Confidence            67889999999999999999964  57899999999754     5899999986     467999999987776   788


Q ss_pred             eecccccchhhhhhhhhhcccccccccccccccccc
Q psy3210         157 LSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLP  192 (272)
Q Consensus       157 i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P  192 (272)
                      +.....|+||.+||+||+.++     .+|+++|..|
T Consensus        74 ~~~~~~F~sl~~LV~~y~~~~-----~gL~~~L~~P  104 (104)
T d1g83a2          74 ITTRAQFETLQQLVQHYSERA-----AGLSSRLVVP  104 (104)
T ss_dssp             ETTTEEESSHHHHHHHHHHCC-----TTSSSCCCCC
T ss_pred             ecCCcccCCHHHHHHHHhhCC-----CCCceeCCCC
Confidence            888888999999999999988     6899999877

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.8e-24  Score=168.57  Aligned_cols=98  Identities=24%  Similarity=0.394  Sum_probs=87.2

Q ss_pred             CCcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS  160 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~  160 (272)
                      ..++.+|||||.|+|++||++|..  .++|+||||.|+.      ++.|+|||+.+++|+||+|...+++   .|++.+.
T Consensus        24 ~~~e~~pWyhg~isR~eAe~lL~~~~~~dGtFLVR~S~~------~g~yvLSv~~~~~v~H~~I~~~~~g---~~~l~~~   94 (124)
T d2oq1a2          24 TAHERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKE------QGTYALSLIYGKTVYHYLISQDKAG---KYCIPEG   94 (124)
T ss_dssp             HGGGGSTTBCSSCCHHHHHHHHHSSCCCTTEEEEEECSS------TTEEEEEEEETTEEEEEEEEECTTS---CEESTTS
T ss_pred             ccccCCCCccCCCCHHHHHHHHhhcCCCCceEEeEecCC------CCCEEEEeecCCceEEEEEEECCCC---CEEeCCC
Confidence            345788999999999999999964  5789999999952      4889999999999999999987766   7899887


Q ss_pred             cccchhhhhhhhhhccccccccccccccccccce
Q psy3210         161 RYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      ..|+||.+||+||+.++     ++|.+.|+.||+
T Consensus        95 ~~F~sl~~LV~~y~~~~-----~gL~~~L~~PcP  123 (124)
T d2oq1a2          95 TKFDTLWQLVEYLKLKA-----DGLIYCLKEACP  123 (124)
T ss_dssp             CCBSSHHHHHHHHHHCC-----TTSSSCCCSBCC
T ss_pred             cccCCHHHHHHHHhhCC-----CCCcccCCCcCc
Confidence            88999999999999988     789999999985

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.1e-24  Score=164.76  Aligned_cols=101  Identities=25%  Similarity=0.348  Sum_probs=85.8

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      .+++.++||||.|+|++||.+|+  .+|+||||+|++.     ++.|+||++.++.|+||+|... ++   .|.+.+ ..
T Consensus         2 ~~l~~~pWyhG~i~R~~Ae~lL~--~~G~FLVR~S~~~-----~g~~vLSv~~~~~v~H~~I~~~-~~---~~~~~~-~~   69 (104)
T d1mila_           2 SQLRGEPWFHGKLSRREAEALLQ--LNGDFLVRESTTT-----PGQYVLTGLQSGQPKHLLLVDP-EG---VVRTKD-HR   69 (104)
T ss_dssp             CSTTTCTTBCSSCCHHHHHTTCC--STTEEEEEECCSS-----CSSEEEEEEETTEEEEEEEBCT-TS---SEECSS-CE
T ss_pred             cccccCCCcCCCCCHHHHHHHHh--cCCcEEEEecCCC-----CCCEEEEEEEccccceEEEEeC-CC---EEEeCC-ee
Confidence            46889999999999999999996  5799999999754     5899999999999999999664 33   677765 46


Q ss_pred             cchhhhhhhhhhcccccccccccccccccccee
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      |+||.|||+||+.++++....++...|..|+.+
T Consensus        70 F~sl~~LV~~y~~~~~~~~~~~~~~~L~~Pi~R  102 (104)
T d1mila_          70 FESVSHLISYHMDNHLPIISAGSELCLQQPVER  102 (104)
T ss_dssp             ESSHHHHHHHHHHHTCCEEETTEEECCCEECCC
T ss_pred             ECCHHHHHHHHhhCCCCcccCCcceEeCCCcCC
Confidence            999999999999999876666677788888754

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.3e-24  Score=163.87  Aligned_cols=102  Identities=25%  Similarity=0.353  Sum_probs=84.7

Q ss_pred             CcccccEeeeeCCHHHHHHhccc--CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc-
Q psy3210          84 NLSEYLWFVGEMGREKATSLLER--EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS-  160 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~--~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~-  160 (272)
                      .+..++||||.|+|++||++|..  .++|+||||+|++.     ++.|+||++.+++|+||+|...++++...|.+.+. 
T Consensus         6 ~h~~~~Wy~g~isR~~Ae~lL~~~g~~dG~FLvR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~   80 (113)
T d2qmsa1           6 IHRTQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRN-----PQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQ   80 (113)
T ss_dssp             STTCCTTEEEEBCHHHHHHHHHHTTCCTTEEEEEECSSC-----TTCEEEEEEETTEEEEEEEEEEESSSCEEEESSTTS
T ss_pred             hhcCCCccCCCCCHHHHHHHHhccCCCCccEEEEeccCC-----CCCEEEEEEeCCeEEEEEEEEeCCCCeEEEEecCCC
Confidence            45678999999999999999963  57899999999754     58899999999999999998765543223455543 


Q ss_pred             cccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         161 RYFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      ..|+||.|||+||+.++     .++.+.|..||++
T Consensus        81 ~~F~sl~~LI~~y~~~~-----~~L~~~L~~pc~r  110 (113)
T d2qmsa1          81 TRFTDLLQLVEFHQLNR-----GILPCLLRHCCTR  110 (113)
T ss_dssp             SCBSSHHHHHHHHTTCC-----TTSSSCCCEECCS
T ss_pred             cccCCHHHHHHHhccCC-----CCCccccCCCCcC
Confidence            36999999999999998     6789999999975

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.2e-24  Score=161.35  Aligned_cols=97  Identities=27%  Similarity=0.469  Sum_probs=83.1

Q ss_pred             cccccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec----
Q psy3210          85 LSEYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ----  159 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~----  159 (272)
                      ++.++||||.|+|++||++|.. ..+|+||||+|++.     ++.|+||++.++.|+|++|...+++   .|.+..    
T Consensus         1 le~~pwyhG~isR~eAe~lL~~~~~~G~FLVR~S~~~-----~g~~~Lsv~~~~~v~H~~I~~~~~~---~~~~~~~~~~   72 (104)
T d1d4ta_           1 MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESV-----PGVYCLCVLYHGYIYTYRVSQTETG---SWSAETAPGV   72 (104)
T ss_dssp             CTTCTTBCCSCCHHHHHHHHHHHCCTTEEEEEECSSS-----TTCEEEEEEETTEEEEEEEEECTTS---CEEECBCTTS
T ss_pred             CCcCCccccCCCHHHHHHHHhhCCCCCeEEEEecCCC-----CCCEEEEEecCCCceEEEEEEcCCC---cEEEeeccCC
Confidence            4678999999999999999965 46899999999754     5899999999999999999987776   565532    


Q ss_pred             -ccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         160 -SRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       160 -~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                       ...|+||.+||+||++++     .++.+.|..|+.
T Consensus        73 ~~~~F~sl~~Li~~y~~~~-----~gl~~~L~~P~~  103 (104)
T d1d4ta_          73 HKRYFRKIKNLISAFQKPD-----QGIVIPLQYPVE  103 (104)
T ss_dssp             CCCCBSSHHHHHHHHTSSS-----SSSSSCCCEECC
T ss_pred             CCcccCCHHHHHHHHhhCC-----CCCcEeCCcccc
Confidence             346999999999999887     688899999985

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.8e-24  Score=161.46  Aligned_cols=94  Identities=24%  Similarity=0.469  Sum_probs=83.0

Q ss_pred             ccEeeeeCCHHHHHHhcc--cCCCceEEEEeCCCCCCCCCCCceEEEEee-----CCeeeEEEEEEecCCCcceEEeecc
Q psy3210          88 YLWFVGEMGREKATSLLE--READGTYLLRIRPQGPTHPNETIYALSLKT-----DEKVKHMKVYEKEMDGVPQYFLSQS  160 (272)
Q Consensus        88 ~~Wf~g~isR~~Ae~lL~--~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~-----~~~v~H~~I~~~~~g~~~~~~i~~~  160 (272)
                      +.||||.|+|++||++|.  ..++|+||||+|++.     ++.|+|||+.     +..|+|++|...+++   .|++.+.
T Consensus         1 e~Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~-----~g~~~Lsv~~~~~~~~~~v~H~~i~~~~~g---~~~~~~~   72 (103)
T d1qcfa2           1 EEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETT-----KGSYSLSVRDYDPRQGDTVKHYKIRTLDNG---GFYISPR   72 (103)
T ss_dssp             STTEETTCCHHHHHHHHHSTTCCTTCEEEEECSSS-----TTSEEEEEEEEETTTEEEEEEEEEEECTTS---CEESSSS
T ss_pred             CCccCCCCCHHHHHHHHhhcCCCCCcEEEEccCCC-----CCCeEEEEEecCCCcCceEEEEEEEEcCCC---ceeecCC
Confidence            579999999999999994  468999999999744     5999999985     468999999988776   7888877


Q ss_pred             cccchhhhhhhhhhccccccccccccccccccce
Q psy3210         161 RYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      ..|+||.+||+||+.++     ++|.++|..||.
T Consensus        73 ~~F~sl~~LV~~y~~~~-----~gL~~~L~~PC~  101 (103)
T d1qcfa2          73 STFSTLQELVDHYKKGN-----DGLCQKLSVPCM  101 (103)
T ss_dssp             SCBSSHHHHHHHHTSSC-----TTSSSCCCSBCC
T ss_pred             cccCCHHHHHHHHhhCC-----CCCCccCCccCC
Confidence            78999999999999988     689999999985

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=5.4e-24  Score=158.98  Aligned_cols=88  Identities=24%  Similarity=0.465  Sum_probs=78.5

Q ss_pred             CcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeeccccc
Q psy3210          84 NLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYF  163 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F  163 (272)
                      +++..+||||.|+|++||++|.+.++|+||||.|++.     ++.|+||++.+++|+||+|....+|   .|.+.+ ..|
T Consensus         2 d~~~~~Wy~g~isR~~Ae~lL~~~~~G~FLVR~S~~~-----~g~~~LSv~~~~~v~H~~I~~~~~g---~~~~~~-~~F   72 (97)
T d1r1qa_           2 DIEFPEWFHEGLSRHQAENLLMGKDIGFFIIRASQSS-----PGDFSISVRHEDDVQHFKVMRDTKG---NYFLWT-EKF   72 (97)
T ss_dssp             CCSCCTTBCTTCCHHHHHHHHHTSCTTCEEEEECSSS-----TTCEEEEEECSSSEEEEECEECTTC---CEESSS-CCB
T ss_pred             CcccCCccCCCCCHHHHHHHHhcCCCCCEEEeecCCC-----CCCEEEEEEecCCeEEEEEEEcCCC---eEEeCC-CCc
Confidence            5778899999999999999999889999999999744     5899999999999999999998776   677765 469


Q ss_pred             chhhhhhhhhhcccccc
Q psy3210         164 RSIVELICCYERNSLIE  180 (272)
Q Consensus       164 ~sL~eLV~~y~~~~L~~  180 (272)
                      +||.+||+||+.++|.+
T Consensus        73 ~sl~~LV~~y~~~~l~~   89 (97)
T d1r1qa_          73 PSLNKLVDYYRTTSISK   89 (97)
T ss_dssp             SSHHHHHHHTTTSCSCS
T ss_pred             CCHHHHHHHHccCCcCC
Confidence            99999999999999753

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.89  E-value=4e-24  Score=161.88  Aligned_cols=97  Identities=29%  Similarity=0.552  Sum_probs=81.9

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccC-CCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeeccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLERE-ADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSR  161 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~-~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~  161 (272)
                      ..++.++||||.|+|++||++|.+. .+|+||||+|+      .++.|+||++.+++|+||+|...+ +   .|.++. .
T Consensus         4 ~~he~~~Wy~g~i~R~eAe~lL~~~~~~G~FLVR~S~------~~~~yvLSv~~~~~v~H~~I~~~~-~---~~~~~~-~   72 (105)
T d2fcia1           4 GIHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRN------EPNSYAISFRAEGKIKHCRVQQEG-Q---TVMLGN-S   72 (105)
T ss_dssp             CTTSSSCCCCSSSCSHHHHHHHHHSSSSCCEEEEECS------STTCEEEEEEETTEECCCEEBCCS-S---CEECSS-S
T ss_pred             cccccCCCccCCCCHHHHHHHHHhCCCCCeEEEEecC------CCCCEEEEEEeccccEEEEEEecC-C---eEecCC-c
Confidence            5678899999999999999999765 48999999994      258899999999999999997643 2   566654 5


Q ss_pred             ccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         162 YFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       162 ~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      .|+||.+||+||+++++     ++...|..|+.+
T Consensus        73 ~F~sl~~LV~~y~~~~~-----~~~~~L~~P~~~  101 (105)
T d2fcia1          73 EFDSLVDLISYYEKHPL-----YRKMKLRYPINE  101 (105)
T ss_dssp             EESTTHHHHHHHHHSCC-----STTCSSCCCCCC
T ss_pred             ccCCHHHHHHHHhhCCC-----CCccCCCCCCCC
Confidence            69999999999999984     577889999864

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=8.3e-24  Score=160.98  Aligned_cols=99  Identities=29%  Similarity=0.479  Sum_probs=84.7

Q ss_pred             CcccccEeeeeCCHHHHHHhcc-cCCCceEEEEeCCCCCCCCCCCceEEEEee------CCeeeEEEEEEecCCCcceEE
Q psy3210          84 NLSEYLWFVGEMGREKATSLLE-READGTYLLRIRPQGPTHPNETIYALSLKT------DEKVKHMKVYEKEMDGVPQYF  156 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~-~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~------~~~v~H~~I~~~~~g~~~~~~  156 (272)
                      +|+.++||||.|+|++||++|. ..++|+||||+|++      ++.|+||++.      +..|+||+|....++.+ .|+
T Consensus         2 ~l~~~~Wy~g~isR~eAe~lL~~~~~~G~FLVR~S~~------~g~y~LSv~~~~~~~~~~~i~h~~I~~~~~~~~-~~~   74 (108)
T d1luia_           2 NLETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT------PGTYTVSVFTKAIISENPCIKHYHIKETNDSPK-RYY   74 (108)
T ss_dssp             CCTTSTTBCTTCCHHHHHHHHHHHCCTTEEEEEECCT------TTCEEEEEECSCCTTTCSCEEEEECEECCCSSC-CEE
T ss_pred             ccccCCCcCCCCCHHHHHHHHHhcCCCCeEEEEecCC------CCCEEEEEEecCCcccCCceeEEEEEEecCCCc-eee
Confidence            6788999999999999999995 45789999999952      5899999986      34699999988766533 688


Q ss_pred             eecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         157 LSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       157 i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      +.+...|+||.+||+||+.++     .+|.+.|+.|+.
T Consensus        75 ~~~~~~F~sl~~LV~~y~~~~-----~~L~~~L~~Pv~  107 (108)
T d1luia_          75 VAEKYVFDSIPLLIQYHQYNG-----GGLVTRLRYPVC  107 (108)
T ss_dssp             SSSSCCBSSHHHHHHHHHTTC-----CSSSSSSSEECC
T ss_pred             cCCCcccCCHHHHHHHHhhCC-----CCCccCCCCcCC
Confidence            888888999999999999988     689999999974

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.2e-23  Score=156.66  Aligned_cols=85  Identities=31%  Similarity=0.525  Sum_probs=74.4

Q ss_pred             cccEeeeeCCHHHHHHhcc-cCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccch
Q psy3210          87 EYLWFVGEMGREKATSLLE-READGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRS  165 (272)
Q Consensus        87 ~~~Wf~g~isR~~Ae~lL~-~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~s  165 (272)
                      ++|||||.|+|++||++|. ..++|+||||+|++.     ++.|+||++.+++|+||+|...+++   .|.+... .|+|
T Consensus         2 s~pWy~g~isR~~Ae~lL~~~~~~G~FLvR~S~~~-----~g~~~LSv~~~~~v~H~~I~~~~~g---~~~~~~~-~F~s   72 (96)
T d1jyra_           2 SMAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESA-----PGDFSLSVKFGNDVQHFKVLRDGAG---KYFLWVV-KFNS   72 (96)
T ss_dssp             CCTTBCCSCCHHHHHHHHHTCCSTTBEEEEECSSS-----TTCEEEEEEETTEEEEEECEECTTS---CEESSSC-EESS
T ss_pred             CCCccCCCCCHHHHHHHHhhCCCCCeEEEEecCCC-----CCCEEEEEEeCCceEEEEEEECCCC---eEEeCCc-cCCC
Confidence            4699999999999999995 467899999999744     5899999999999999999988766   6777655 5999


Q ss_pred             hhhhhhhhhcccccc
Q psy3210         166 IVELICCYERNSLIE  180 (272)
Q Consensus       166 L~eLV~~y~~~~L~~  180 (272)
                      |.+||+||++++|.+
T Consensus        73 l~~LV~~y~~~~l~~   87 (96)
T d1jyra_          73 LNELVDYHRSTSVSR   87 (96)
T ss_dssp             HHHHHHHTTSSCSCS
T ss_pred             HHHHHHHHhhCCCCC
Confidence            999999999999753

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=1e-24  Score=166.80  Aligned_cols=105  Identities=30%  Similarity=0.514  Sum_probs=92.9

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      .++++++||||.|+|++||++|.+.++|+||||+|++.    ..+.|+||++.++.++|++|...++    .|++.+...
T Consensus         6 ~~l~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~----~~~~~~ls~~~~~~~~H~~I~~~~~----~~~~~~~~~   77 (111)
T d1fu6a_           6 MSLQDAEWYWGDISREEVNEKLRDTADGTFLVRDASTK----MHGDYTLTLRKGGNNKSIKIFHRDG----KYGFSDPLT   77 (111)
T ss_dssp             CCCSCCSSCCSSCCSHHHHHHSSSCSSCCCCCBSSCCS----SSCCSBCEEEETTEEEECCCCCTTT----CCCTTTTSC
T ss_pred             CccCcCcCCCCCCCHHHHHHHhCcCCCCEEEEEeccCC----CCccEEEEEecCCceEEEEEEEcCC----eEEECCCcc
Confidence            67899999999999999999999888999999999643    2467999999999999999987554    688887778


Q ss_pred             cchhhhhhhhhhcccccccccccccccccccee
Q psy3210         163 FRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       163 F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      |+||.+||+||+++++.....++++.|..|+.+
T Consensus        78 F~sl~~LV~~y~~~~l~~~~~~l~~~L~~Pv~r  110 (111)
T d1fu6a_          78 FNSVVELINHYRNESLAQYNPKLDVKLLYPVSK  110 (111)
T ss_dssp             CCCTTHHHHHHHTTCSTTTCSSCCCCSCCCCCC
T ss_pred             cCCHHHHHHHHhhCcCCccCCCCccccCccccC
Confidence            999999999999999988878899999999854

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.1e-23  Score=161.38  Aligned_cols=101  Identities=21%  Similarity=0.322  Sum_probs=83.6

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeeccc-
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSR-  161 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~-  161 (272)
                      .++++++||||.|+|++||++|.+.++|+||||+|++.     ++.|+||++.++.|+|++|...++    .|.+.... 
T Consensus         6 ~~l~~~~Wy~g~isR~~Ae~lL~~~~~GtFLVR~S~~~-----~~~~~LSv~~~~~v~H~~I~~~~~----~~~l~~~~~   76 (112)
T d2izva2           6 LQINNNPCYWGVMDKYAAEALLEGKPEGTFLLRDSAQE-----DYLFSVSFRRYSRSLHARIEQWNH----NFSFDAHDP   76 (112)
T ss_dssp             HHHHHCTTEEEECCHHHHHHHHTTCCTTEEEEEECSST-----TCSEEEEEEETTEEEEEECEEETT----EEESCTTCT
T ss_pred             HHhccCCCcCCCCCHHHHHHHHccCCCCcEEEeecCCC-----CCCeEEEEEecCCceEEEEEEeCC----eEEEeeccc
Confidence            57889999999999999999999888999999999744     589999999999999999988754    68886542 


Q ss_pred             ---ccchhhhhhhhhhcccccccccccccccccccee
Q psy3210         162 ---YFRSIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       162 ---~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                         .|+||.+||+||+.+++...+   .+.|+.|+.+
T Consensus        77 ~~~~F~sl~~LV~~Y~~~~~~~~~---~~llt~P~~r  110 (112)
T d2izva2          77 CVFHSPDITGLLEHYKDPSACMFF---EPLLSTPLIR  110 (112)
T ss_dssp             TSCCBSSHHHHHHHTCCGGGCCTT---SCCCCEECCC
T ss_pred             CcccCCCHHHHHHHHhcccccccC---ccccCCCCCC
Confidence               699999999999998864222   2346666643

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9.9e-24  Score=160.81  Aligned_cols=99  Identities=23%  Similarity=0.326  Sum_probs=83.2

Q ss_pred             cccEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccch
Q psy3210          87 EYLWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFRS  165 (272)
Q Consensus        87 ~~~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~s  165 (272)
                      +++||||.|+|++||++|.+ ..+|+||||+|++.     ++.|+|||+.+++|+|++|...++    .|++.+...|+|
T Consensus         2 ~~~Wy~g~isR~~Ae~lL~~~~~~G~FLvR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~~~----~~~~~~~~~F~s   72 (109)
T d2shpa2           2 SRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSN-----PGDLTLSVRRNGAVTHIKIQNTGD----YYDLYGGEKFAT   72 (109)
T ss_dssp             CSTTBCSSCCHHHHHHHHHHHCCTTEEEEEECSSS-----TTCEEEEEEETTEEEEEEEECSSS----CEEETTSCEESS
T ss_pred             CCccccCCCCHHHHHHHHhhCCCCCeEEEEecCCC-----CCCEEEEEEeCCcEEEEEEEEcCC----eEEEcCCcccCC
Confidence            57899999999999999965 45899999999744     589999999999999999987655    588877778999


Q ss_pred             hhhhhhhhhcccccccc-ccccccccccce
Q psy3210         166 IVELICCYERNSLIENF-IGLNVRLQLPFR  194 (272)
Q Consensus       166 L~eLV~~y~~~~L~~~~-~~l~~~L~~P~~  194 (272)
                      |.+||+||+.+++.... .++.+.|..|+.
T Consensus        73 l~~LV~~y~~~~~~~~~~~~~~~~L~~P~~  102 (109)
T d2shpa2          73 LAELVQYYMEHHGQLKEKNGDVIELKYPLN  102 (109)
T ss_dssp             HHHHHHHHHTCTTCSBSSSSCBCCCCEECC
T ss_pred             HHHHHHHHHHCCCCcccCCCCeeeccccCC
Confidence            99999999988865332 346677888875

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.86  E-value=4e-23  Score=150.79  Aligned_cols=83  Identities=24%  Similarity=0.478  Sum_probs=68.0

Q ss_pred             CcccccEeeeeCCHHHHHHhccc---CCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecc
Q psy3210          84 NLSEYLWFVGEMGREKATSLLER---EADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQS  160 (272)
Q Consensus        84 ~l~~~~Wf~g~isR~~Ae~lL~~---~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~  160 (272)
                      +++.+|||||.|+|++||++|..   .++|+||||+|++.     ++.|+|||+.++.|+|++|...+++   .|. .+.
T Consensus         1 el~~~pWyhg~isR~~Ae~lL~~~~~~~dG~FLvR~S~~~-----~g~~~Lsv~~~~~v~h~~I~~~~~~---~~~-~~~   71 (86)
T d1rpya_           1 ELSDYPWFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETR-----PGECVLTFNFQGKAKHLRLSLNGHG---QCH-VQH   71 (86)
T ss_dssp             CGGGSTTBCTTCCHHHHHHHHHTTGGGGTTCEEEEECSSS-----TTCEEEEEEETTEEEEEEC----CC---CHH-HHH
T ss_pred             CCccCcccCCCCCHHHHHHHHHhCCCCCCceEEEEecCCC-----CCcEEEEEEECCceEEEEEEEcCCc---eEE-eCC
Confidence            46789999999999999999975   35799999999744     5899999999999999999987765   444 445


Q ss_pred             cccchhhhhhhhhhc
Q psy3210         161 RYFRSIVELICCYER  175 (272)
Q Consensus       161 ~~F~sL~eLV~~y~~  175 (272)
                      ..|+||.+||+||++
T Consensus        72 ~~F~sl~~LV~~y~t   86 (86)
T d1rpya_          72 LWFQSVFDMLRHFHT   86 (86)
T ss_dssp             HHHHHHHHHHHHHTC
T ss_pred             CeeCCHHHHHHhhcC
Confidence            679999999999974

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.6e-22  Score=151.29  Aligned_cols=97  Identities=25%  Similarity=0.367  Sum_probs=83.3

Q ss_pred             ccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec-ccccc
Q psy3210          86 SEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ-SRYFR  164 (272)
Q Consensus        86 ~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~-~~~F~  164 (272)
                      ...+||||.|+|++||++|++.++|+||||+|.+.      ..|+||++.++.++|++|...+++   .|++.+ ...|+
T Consensus         7 ~~~pWy~g~isR~eAe~lL~~~~~G~FLvR~S~~~------~~y~Lsv~~~~~~~h~~I~~~~~g---~~~~~~~~~~F~   77 (106)
T d2cs0a1           7 GVPEWFHGAISREDAENLLESQPLGSFLIRVSHSH------VGYTLSYKAQSSCCHFMVKLLDDG---TFMIPGEKVAHT   77 (106)
T ss_dssp             SCCSSBCSSCCHHHHHHHHHTSCTTCEEEEECSSS------SSEEEEECCSSSCEEEEEEECTTS---CEECTTCSCCBS
T ss_pred             CCCCCccCCCCHHHHHHHHcCCCCCcEEEEecCCC------CCEEEEEEecCCceeEEEEEcCCC---CEEEecCCccCC
Confidence            34689999999999999999989999999999643      349999999999999999988776   677754 45799


Q ss_pred             hhhhhhhhhhcccccccccccccccccccee
Q psy3210         165 SIVELICCYERNSLIENFIGLNVRLQLPFRQ  195 (272)
Q Consensus       165 sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~~  195 (272)
                      ||.+||+||+++++    ..+.+.|+.|+.+
T Consensus        78 sl~eLV~~y~~~~~----~~~~~~L~~P~~~  104 (106)
T d2cs0a1          78 SLDALVTFHQQKPI----EPRRELLTQPCRQ  104 (106)
T ss_dssp             SHHHHHHHHTTSCC----SSCCCCCCSBCCC
T ss_pred             CHHHHHHHHHHCCC----CCccCcccCcCCC
Confidence            99999999999987    4677889999864

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.8e-22  Score=151.04  Aligned_cols=95  Identities=23%  Similarity=0.392  Sum_probs=77.3

Q ss_pred             cEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCc-------------ceE
Q psy3210          89 LWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGV-------------PQY  155 (272)
Q Consensus        89 ~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~-------------~~~  155 (272)
                      .||||.|+|++||++|.+.++|+||||+|++.     ++.|+||++.+++|+||+|...+++..             ..+
T Consensus         1 sWy~g~isR~~Ae~lL~~~~~G~FLVR~S~~~-----~~~~~LS~~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~   75 (109)
T d2eyva1           1 SWYWGRLSRQEAVALLQGQRHGVFLVRDSSTS-----PGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSR   75 (109)
T ss_dssp             TSCCBCCCHHHHHHHCSSCSTTCEEEECCCSS-----SSCEEEEEEETTEEEEEEEECCCCSSCCCSSSSCCCCSCCCCC
T ss_pred             CCCCCCCCHHHHHHHhcCCCCCeEEeeecCCC-----CCCEEEEEEECCEEEEEEEEEcCCcceeeccccccccccccce
Confidence            49999999999999999889999999999744     589999999999999999988765310             012


Q ss_pred             Eeecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         156 FLSQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       156 ~i~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      ++.+...|+||.+||+||+.+++.      .+.|..|++
T Consensus        76 ~~~~~~~F~sl~~LV~~y~~~~l~------~~~L~~P~~  108 (109)
T d2eyva1          76 LRIGDQEFDSLPALLEFYKIHYLD------TTTLIEPVS  108 (109)
T ss_dssp             EEETTEEESSHHHHHHHSSSSCSS------SSCCCSBCC
T ss_pred             EEeCCeeeCCHHHHHHHHhhCcCC------CCccCCcCC
Confidence            334455799999999999998862      356888875

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=8.9e-22  Score=149.34  Aligned_cols=96  Identities=27%  Similarity=0.561  Sum_probs=81.2

Q ss_pred             cEeeeeCCHHHHHHhccc-CCCceEEEEeCCCCCCCCCCCceEEEEeeC----------CeeeEEEEEEecCCCcceEEe
Q psy3210          89 LWFVGEMGREKATSLLER-EADGTYLLRIRPQGPTHPNETIYALSLKTD----------EKVKHMKVYEKEMDGVPQYFL  157 (272)
Q Consensus        89 ~Wf~g~isR~~Ae~lL~~-~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~----------~~v~H~~I~~~~~g~~~~~~i  157 (272)
                      .||||.|+|++||++|.+ ..+|+||||+|++.     ++.|+||++..          ..++|+.|...++    .|++
T Consensus         1 rWyhG~i~R~~Ae~lL~~~~~~G~FLVR~S~~~-----~g~~~LSv~~~~~~~~~~~~~~~~~h~~i~~~~~----~~~~   71 (108)
T d2shpa3           1 RWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSH-----PGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQEL----KYDV   71 (108)
T ss_dssp             TTBCCSCCHHHHHHHHHHTCCTTEEEEEECSSS-----TTCEEEEEEECC-----CCCCCEEEEEEEEEETT----EEES
T ss_pred             CCCcCCCCHHHHHHHHhhcCCCCeEEEEecCCC-----CCCeEEEEEecCccccccccccceeeEEEEeCCC----ceEe
Confidence            499999999999999975 47899999999744     58999999984          4589999987665    6888


Q ss_pred             ecccccchhhhhhhhhhccccccccccccccccccce
Q psy3210         158 SQSRYFRSIVELICCYERNSLIENFIGLNVRLQLPFR  194 (272)
Q Consensus       158 ~~~~~F~sL~eLV~~y~~~~L~~~~~~l~~~L~~P~~  194 (272)
                      .+...|+||.+||+||+++++.+. .++.+.|..|+.
T Consensus        72 ~~~~~F~sl~~LV~~y~~~~l~~~-~g~~~~L~~Pv~  107 (108)
T d2shpa3          72 GGGERFDSLTDLVEHYKKNPMVET-LGTVLQLKQPLN  107 (108)
T ss_dssp             SSSCCBSSHHHHHHHHHHSCCBCT-TSCBCCCCEECC
T ss_pred             CCCcccCCHHHHHHHHhhCCCCCC-CCceEEcCCCCc
Confidence            888889999999999999998754 467778888873

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=9.1e-22  Score=148.23  Aligned_cols=86  Identities=23%  Similarity=0.438  Sum_probs=74.7

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeec---
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQ---  159 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~---  159 (272)
                      .+++.++||||.|+|++||++|.+.++|+||||.|++.     ++.|+||++.+++|+|++|...++    .|.++.   
T Consensus        10 ~~l~~~~Wy~g~i~R~~Ae~~L~~~~~GtFLVR~S~~~-----~~~~~LSv~~~~~v~H~~I~~~~~----~~~~~~~~~   80 (103)
T d2c9wa2          10 RELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHS-----DYLLTISVKTSAGPTNLRIEYQDG----KFRLDSIIC   80 (103)
T ss_dssp             HHHHHTSCBCTTCCHHHHHHHHTTSCTTCEEEEECCST-----TCSEEEEEEETTEEEEEEEEEETT----EEEECTTTT
T ss_pred             HHHhhCCCcCCCCCHHHHHHHhcCCCCCceEEeccCCC-----CCCEEEEEEECCEEEEEEEEEcCC----eEeeCCccc
Confidence            46788999999999999999999889999999999754     589999999999999999988765    566644   


Q ss_pred             ----ccccchhhhhhhhhhccc
Q psy3210         160 ----SRYFRSIVELICCYERNS  177 (272)
Q Consensus       160 ----~~~F~sL~eLV~~y~~~~  177 (272)
                          ...|+||.+||+||++.+
T Consensus        81 ~~~~~~~F~sl~~LI~~y~~~s  102 (103)
T d2c9wa2          81 VKSKLKQFDSVVHLIDYYVQMC  102 (103)
T ss_dssp             TGGGCCCBSCHHHHHHHHHHHT
T ss_pred             cccCCCccCCHHHHHHHHHhhC
Confidence                246999999999998754

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.4e-18  Score=137.45  Aligned_cols=84  Identities=24%  Similarity=0.382  Sum_probs=67.8

Q ss_pred             CCcccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccc
Q psy3210          83 ENLSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRY  162 (272)
Q Consensus        83 ~~l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~  162 (272)
                      ..+...+||||.|+|++||++|.+ .+|+||||+|++.     ++.|+|||+.+++|+||+|.++ +    .+++.+. .
T Consensus        30 ~~~~~~~wyhG~isR~eAe~lL~~-~dGsFLVR~S~~~-----~g~y~LSv~~~~~v~H~~I~~~-g----~~~~~~~-~   97 (141)
T d1xa6a2          30 RPKYYGREFHGIISREQADELLGG-VEGAYILRESQRQ-----PGCYTLALRFGNQTLNYRLFHD-G----KHFVGEK-R   97 (141)
T ss_dssp             SSCSSCSSEEEECCHHHHHHHHCS-CTTBEEEEECSSS-----TTCEEEEEEETTEEEECCCEES-S----SEECSSS-C
T ss_pred             CcccccceeeccCCHHHHHHHHcC-CCCeEEEEecCCC-----CCCEEEEEEECCEEEEEEEEEC-C----CEEECCC-e
Confidence            345566899999999999999975 5799999999744     5899999999999999999763 3    4667665 6


Q ss_pred             cchhhhhhh-----hhhcccc
Q psy3210         163 FRSIVELIC-----CYERNSL  178 (272)
Q Consensus       163 F~sL~eLV~-----~y~~~~L  178 (272)
                      |+||.|||+     +|.....
T Consensus        98 F~sl~eLV~dgLv~~~~~~~~  118 (141)
T d1xa6a2          98 FESIHDLVTDGLITLYIETKA  118 (141)
T ss_dssp             CCCSSHHHHHHHHHHHHHHSC
T ss_pred             ECCHHHHHhhhhhhhhccccc
Confidence            999999885     5555443

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=4.2e-16  Score=104.14  Aligned_cols=54  Identities=28%  Similarity=0.557  Sum_probs=50.4

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.+++.+||+|.+||+|.|+++.+  .|||.|+.+|+.|+||++||+++
T Consensus         3 yarAlydy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~g~~~g~~G~~P~~yve~i   56 (57)
T d1utia_           3 WARALYDFEALEEDELGFRSGEVVEVLDSSN--PSWWTGRLHNKLGLFPANYVAPM   56 (57)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEECcCCCCCCcCCcCCCCCCEEEEeEEcC--CCEEEEEECCcEEEEEHHHEEEc
Confidence            6899999999999999999999999998776  68999999999999999999964

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=4.9e-16  Score=103.44  Aligned_cols=54  Identities=28%  Similarity=0.537  Sum_probs=50.4

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.+.+.+||+|.+||+|.|+++.+  .|||.|+.+|+.|+||++||+++
T Consensus         3 yv~Alydy~~~~~~eLs~~~Gd~i~v~~~~~--~~W~~g~~~g~~G~~P~~yv~~v   56 (56)
T d1gcqa_           3 YVQALFDFDPQEDGELGFRRGDFIHVMDNSD--PNWWKGACHGQTGMFPRNYVTPV   56 (56)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEECcCCCcCCcCCcCCCCCCEEEEEEecC--CCEEEEEECCeEEEEEHhHEEEC
Confidence            5789999999999999999999999998776  68999999999999999999874

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=99.60  E-value=4.9e-16  Score=104.18  Aligned_cols=55  Identities=29%  Similarity=0.660  Sum_probs=51.3

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+++.+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+++
T Consensus         3 ~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~--~~W~~g~~~g~~G~~P~~yvep~   57 (58)
T d1sema_           3 KFVQALFDFNPQESGELAFKRGDVITLINKDD--PNWWEGQLNNRRGIFPSNYVCPY   57 (58)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEECSS--SSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEEECCCCCcCCcCCcCCCCCCEEEEeEEcC--CCEEEEEECCeEEEEEhhhEEEC
Confidence            46899999999999999999999999998877  68999999999999999999965

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=5e-16  Score=105.59  Aligned_cols=56  Identities=23%  Similarity=0.426  Sum_probs=51.8

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+++.
T Consensus         6 ~~v~Aly~y~a~~~~eLsf~~Gd~i~vl~~~~--~~Ww~g~~~g~~G~~P~~yVe~~~   61 (62)
T d1k4us_           6 SQVEALFSYEATQPEDLEFQEGDIILVLSKVN--EEWLEGESKGKVGIFPKVFVEDSA   61 (62)
T ss_dssp             EEEECCSCBCCCSSSBCCBCSSCEEEEEEESS--SSCEEEECSSCEEEECGGGCCCSC
T ss_pred             CEEEECCCCCCCCcCCcCCCCCCEEEEeEEcC--CCEEEEEECCcEEEEchHHeEECC
Confidence            46899999999999999999999999998876  689999999999999999999853

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.59  E-value=9.9e-16  Score=102.66  Aligned_cols=54  Identities=26%  Similarity=0.476  Sum_probs=50.2

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGN  251 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE  251 (272)
                      +.++|+|||.+++.+||+|++||+|.|+++.+  .|||.|+.+|+.|+||++||++
T Consensus         3 rr~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~--~~W~~g~~~g~~G~~P~~yV~~   56 (58)
T d1uj0a_           3 RRVRALYDFEAVEDNELTFKHGELITVLDDSD--ANWWQGENHRGTGLFPSNFVTT   56 (58)
T ss_dssp             EEEEESSCBCCCSTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEES
T ss_pred             CEEEECCCCCCCCcCCcCCCCCCEEEEeEEeC--CCEEEEEECCeEEEEehHhEee
Confidence            46899999999999999999999999998876  6899999999999999999984

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.58  E-value=1.1e-15  Score=101.25  Aligned_cols=54  Identities=20%  Similarity=0.553  Sum_probs=50.2

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.+++.+||+|++||+|.|+++.+  .|||.|+.+|+.|+||++||+++
T Consensus         2 ~~vAl~dy~~~~~~eLs~~~Gd~v~v~~~~~--~~Ww~g~~~g~~G~~P~~yv~~i   55 (55)
T d1u06a1           2 LVLALYDYQEKSPREVTMKKGDILTLLNSTN--KDWWKVEVNDRQGFVPAAYVKKL   55 (55)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEECCS--SSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEECCCCCCCCcCCccCCCCCEEEEeEEcC--CCEEEEEECCeEEEEeHHHEEEC
Confidence            4789999999999999999999999998876  68999999999999999999864

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.5e-15  Score=103.47  Aligned_cols=56  Identities=23%  Similarity=0.574  Sum_probs=50.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCc-CCeEEEEeCCeeeeeeccchhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQ-KGWWKGKIDERVSYFFQLYWGN  251 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~-~gwW~G~~~g~~G~fP~~yVeE  251 (272)
                      ..++|+|||.+++.+||+|++||+|+|+++.+++ .|||.|+.+|+.|+||++||+.
T Consensus         5 g~v~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~~gW~~g~~~g~~G~~P~~yv~~   61 (63)
T d1ycsb2           5 GVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGL   61 (63)
T ss_dssp             GEEEESSCBCCSSTTBCCBCSSCEEEECCCCTTSCSSEEEEEETTEEEEEEGGGEEC
T ss_pred             CEEEEeeCCCCCCCCCcCCCCCCEEEEEEecCCCCCCEEEEEECCeEEEEchHHhEe
Confidence            3588999999999999999999999999876543 6899999999999999999974

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.57  E-value=1.9e-15  Score=101.27  Aligned_cols=56  Identities=30%  Similarity=0.618  Sum_probs=50.9

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.+++.+||+|.+||+|.|+.+.++..+||.|+.+|+.|+||++||+.+
T Consensus         3 ~~~Alydy~a~~~~ELs~~~Gd~v~vl~~~~~~~~W~~~~~~g~~G~vP~~yve~i   58 (58)
T d1oota_           3 KAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV   58 (58)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCSCTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             eEEEccCCCCCCCCCccCCCCCEEEEEEeecCCCCEEEEEECCcEEEEcHHHEEEC
Confidence            48999999999999999999999999988764468999999999999999999853

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=2.5e-15  Score=99.97  Aligned_cols=53  Identities=26%  Similarity=0.557  Sum_probs=44.6

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWG  250 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVe  250 (272)
                      .|+|+|||.+.+.+||+|.+||+|+|+.+.++ .+||.|+.+|+.|+||+|||+
T Consensus         2 ~a~Alydy~a~~~~ELs~~~Gd~v~v~~~~~~-~~W~~~~~~g~~G~vP~nyve   54 (56)
T d1gria1           2 EAIAKYDFKATADDELSFKRGDILKVLNEECD-QNWYKAELNGKDGFIPKNYIE   54 (56)
T ss_dssp             EEEECSCBCCCSSSCCCBCTTCEEEC-------CCEEEEESSSCEEEEEGGGEE
T ss_pred             EEEEeeCCCCCCCCCcCCCCCCEEEEEeccCC-CCeEEEEECCcEEEEehhhEE
Confidence            58999999999999999999999998876543 689999999999999999996

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=2.2e-15  Score=101.01  Aligned_cols=54  Identities=20%  Similarity=0.381  Sum_probs=50.5

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.+.+.+||+|++||+|.|+.+.+  .+||.|+.+|+.|+||++||+++
T Consensus         4 ~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~--~~Ww~~~~~g~~G~~P~~yve~l   57 (58)
T d1ng2a1           4 TYRAIADYEKTSGSEMALSTGDVVEVVEKSE--SGWWFCQMKAKRGWIPASFLEPL   57 (58)
T ss_dssp             EEECSSCBCCSSTTCCCBCTTCEEEEEECCT--TSCCEEEECCCCCCCCGGGCCCS
T ss_pred             EEEECccCcCCCCCCcCCCCCCEEEEEEecC--CCeEEEEECCCCcEEcHhHEEEC
Confidence            5789999999999999999999999998776  68999999999999999999975

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=99.53  E-value=3.7e-15  Score=98.01  Aligned_cols=52  Identities=17%  Similarity=0.384  Sum_probs=47.2

Q ss_pred             eeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhh
Q psy3210         198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGN  251 (272)
Q Consensus       198 ~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE  251 (272)
                      ++|+|||.+.+.+||+|++||+|.|+.+.+  .+||.++. +|+.|+||++||+|
T Consensus         1 V~Alydy~a~~~~eLs~~~Gd~~~vl~~~~--~~Ww~~~~~~g~~G~vP~~yv~e   53 (53)
T d2rn8a1           1 VIALYDYQTNDPQELALRCDEEYYLLDSSE--IHWWRVQDKNGHEGYAPSSYLVE   53 (53)
T ss_dssp             EEESSCCCCSSTTBCCCCTTCEEEECCCSC--SSCEEEECTTSCEEEECGGGEEE
T ss_pred             CEEeeeECCCCCCeeeECCCCEEEEeEEcC--CCeEEEEeCCCCEEEEeHHHEeC
Confidence            579999999999999999999999998776  68999984 58999999999985

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=5.2e-15  Score=97.21  Aligned_cols=51  Identities=29%  Similarity=0.510  Sum_probs=47.9

Q ss_pred             eeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchh
Q psy3210         198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWG  250 (272)
Q Consensus       198 ~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVe  250 (272)
                      .+|+|||.++..+||+|.+||+|.|+.+.+  .|||.|+.+|+.|+||++||+
T Consensus         3 yval~~y~a~~~~eLs~~~Gd~v~vl~~~~--~gWw~g~~~g~~G~~P~~yve   53 (53)
T d1wlpb1           3 YVAIKAYTAVEGDEVSLLEGEAVEVIHKLL--DGWWVIRKDDVTGYFPSMYLQ   53 (53)
T ss_dssp             EEECSCBCCCSSSBCCBCTTCEEEEEECCT--TSSEEEESSSCEEEECSTTEE
T ss_pred             EEEeeeECCCCCCEecCCCCCEEEEEeecC--CceEEEEECCcEeEecHHhCC
Confidence            579999999999999999999999998876  689999999999999999986

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.52  E-value=6.6e-15  Score=101.46  Aligned_cols=58  Identities=28%  Similarity=0.529  Sum_probs=49.3

Q ss_pred             eeeeeeeccCCCCCCC-CCccCCCcEEEEeeeeCC---cCCeEEEEe-CCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEAN-QLPLKQGCQVIVLSKEGE---QKGWWKGKI-DERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~-ELsl~~Gd~i~v~~k~ge---~~gwW~G~~-~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+.+.+ ||+|++||+|.|+++.+.   ..|||+|+. +|+.|+||+|||+.+
T Consensus         5 ~~~~~Alydy~~~~~~~ELs~~~Gd~i~vl~~~d~~~~~~~Ww~g~~~~G~~G~~P~nyve~i   67 (67)
T d2v1ra1           5 LEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII   67 (67)
T ss_dssp             CEEEEESSCBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEEC
T ss_pred             CEEEEECccCCCCCCCCEeCCCCCCEEEEEEeecCCCcCCCeEEEEeCCCCEEEEEHHHEEEC
Confidence            3468999999998765 999999999999987642   268999986 689999999999853

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.51  E-value=1.1e-14  Score=97.21  Aligned_cols=53  Identities=23%  Similarity=0.432  Sum_probs=48.7

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGN  251 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE  251 (272)
                      .++|+|||.+++.+||+|++||+|.|+++.+  .+||.|+. +|+.|+||++||++
T Consensus         3 ~v~Alydy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~~~~~~g~~G~vP~~yve~   56 (57)
T d1ckaa_           3 YVRALFDFNGNDEEDLPFKKGDILRIRDKPE--EQWWNAEDSEGKRGMIPVPYVEK   56 (57)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEECSS--SSEEEEECTTSCEEEEEGGGEEC
T ss_pred             EEEECCCCCcCCcCCcCCCCCCEEEEEEEcC--CCeEEEEECCCCEEEEcHHHeEE
Confidence            5899999999999999999999999998776  68999986 47999999999986

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=6e-15  Score=104.24  Aligned_cols=57  Identities=28%  Similarity=0.601  Sum_probs=52.0

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|||.+...+||+|.+||+|.|+.+.+  .+||+|+.+|+.|+||++||+++..
T Consensus        11 ~~~rAlydy~a~~~~eLs~~~Gd~i~v~~~~~--~~W~~g~~~g~~G~~P~~yv~~i~~   67 (76)
T d1ujya_          11 LIVKARFNFKQTNEDELSVCKGDIIYVTRVEE--GGWWEGTLNGRTGWFPSNYVREIKS   67 (76)
T ss_dssp             EEEECCSCBCCSSTTSCCBCSSCCEEESSCCS--SSCEEEEETTEEEEECTTTSEECCH
T ss_pred             EEEEECccCCCCCCCCccCCCCCEEEEeEEcC--CCEEEEEECCcEEEEchHHEEECCC
Confidence            46899999999999999999999999998876  6899999999999999999997643

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.50  E-value=1.2e-14  Score=96.95  Aligned_cols=55  Identities=20%  Similarity=0.359  Sum_probs=49.5

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      .++|+|||.++..+||+|++||+|+|+.+..+ .+||.++..|+.|+||++||+++
T Consensus         2 ~~vAlydy~a~~~~eLs~~~Gd~i~vl~~~~~-~~W~~~~~~g~~G~~P~~yv~~v   56 (57)
T d1opka1           2 LFVALYDFVASGDNTLSITKGEKLRVLGYNHN-GEWCEAQTKNGQGWVPSNYITPV   56 (57)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEECTT-SSEEEEECSSCEEEEEGGGEEES
T ss_pred             EEEECccCCCCCcCCcCCCCCCEEEEeEecCC-CCEEEEEECCCEeEEchhheEEC
Confidence            46899999999999999999999999987653 46999999999999999999975

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.8e-15  Score=110.47  Aligned_cols=56  Identities=21%  Similarity=0.516  Sum_probs=51.3

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+++.+||+|++||+|.|+++.+  .|||+|+.+|+.|+||+|||+++.
T Consensus        35 ~~~~Alydy~a~~~~ELsf~~Gd~i~Vl~~~~--~gWw~g~~~g~~G~~P~nyVe~~~   90 (98)
T d1udla_          35 CQVIAMYDYAANNEDELSFSKGQLINVMNKDD--PDWWQGEINGVTGLFPSNYVKMTT   90 (98)
T ss_dssp             EEEEESSCCCCSSTTSCCCCTTCEEEECBCCS--SSEEBCBSSSCBCCEETTSEEECC
T ss_pred             cEEEEccCCCCCCCCEeeEcCCCEEEEeEecC--CCeEEEEECCeEEEEchHHEEECC
Confidence            35899999999999999999999999998876  689999999999999999998654

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.50  E-value=1.1e-14  Score=97.48  Aligned_cols=54  Identities=24%  Similarity=0.441  Sum_probs=49.2

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGNF  252 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE~  252 (272)
                      +++|+|||.+...+||+|.+||+|.|+.+.+  .|||.|+..  |+.|+||++||+.+
T Consensus         2 ~~~Alydy~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~~~~~~~g~~G~~P~~yVe~i   57 (58)
T d1jo8a_           2 WATAEYDYDAAEDNELTFVENDKIINIEFVD--DDWWLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEECCS--SSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             EEEEccCCCCCCcCCcCCCCCCEEEEEEEcC--CCEEEEEECCCCCEEEEchHHEEEc
Confidence            5899999999999999999999999998877  689999974  79999999999864

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.2e-14  Score=101.29  Aligned_cols=58  Identities=19%  Similarity=0.343  Sum_probs=51.2

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGNFRL  254 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE~~~  254 (272)
                      .++|+|||.++..+||+|.+||+|.|+++..++.|||.++. +|+.|+||++||+++.-
T Consensus         8 ~~~Alydf~~~~~~eLs~~~Gd~i~vl~~~~~~~~Ww~~~~~~G~~G~vP~~yv~~~~~   66 (71)
T d1u5sa1           8 VVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSD   66 (71)
T ss_dssp             EEEESSCCCCCSSSBCCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECCC
T ss_pred             EEEECccCCCCCCCEeeECCCCEEEEEEcccCCCCeEEEEECCCCEEEEChHHEEECCC
Confidence            58999999999999999999999999987654468999985 58999999999997653

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.4e-14  Score=101.74  Aligned_cols=57  Identities=19%  Similarity=0.353  Sum_probs=51.1

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFRL  254 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~~  254 (272)
                      ...++|+|||.+++.+||+|.+||+|+|+++ .  .+||.|+.+|+.||||++||+.+..
T Consensus        10 ~~~~~alydy~a~~~~ELs~~~Gd~i~vl~~-~--~~ww~g~~~g~~G~fP~~yve~i~~   66 (74)
T d1j3ta_          10 NLKAQALCSWTAKKDNHLNFSKHDIITVLEQ-Q--ENWWFGEVHGGRGWFPKSYVKIIPG   66 (74)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEEEE-C--SSEEEEESTTCCCEEEGGGEEECCC
T ss_pred             CeEEEEccCCCCCCCCEecCCCCCEEEEEEc-c--CCeEEEEECCcEEEEchhhEEECCC
Confidence            4468999999999999999999999999976 3  4799999999999999999997643

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=9.4e-15  Score=102.15  Aligned_cols=57  Identities=16%  Similarity=0.250  Sum_probs=51.0

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+.+.++ .+||+|+.+|+.|+||++||+.+.
T Consensus        11 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~-~~W~~g~~~g~~G~~P~~yve~i~   67 (72)
T d1ugva_          11 RKAKALYACKAEHDSELSFTAGTVFDNVHPSQE-PGWLEGTLNGKTGLIPENYVEFLS   67 (72)
T ss_dssp             CCEEESSCBCCCSSSBCCBCTTCEEBSCCBCSS-TTEEEEESSSCEEEEEGGGEEECC
T ss_pred             EEEEEcccCCCCCCCEecCCCCCEEEEeeccCC-CCEEEEEeCCCEEEEchHHEEECC
Confidence            358999999999999999999999999987654 579999999999999999999754

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.47  E-value=2.1e-14  Score=100.35  Aligned_cols=56  Identities=21%  Similarity=0.306  Sum_probs=48.2

Q ss_pred             eeeeeeccCCCC-CCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPT-EANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~-~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+. +.+||+|++||+|+|+.+..+ .|||.|+.+  ++.|+||+|||+++
T Consensus         8 ~~~~Alydy~~~~~~deLsf~~Gd~i~vl~~~~~-~gW~~g~~~~~g~~G~fP~nyVe~i   66 (72)
T d1spka_           8 QKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEK-DGWLYGEHDTTKARGWFPSSYTKLL   66 (72)
T ss_dssp             CEEECSSCBCCSSCSSBCCBCTTCEEEECCSSCB-TTEEEEEETTTCCEEEEEGGGCEEC
T ss_pred             CEEEEeeccCCCCCCCEeeEcCCCEEEEEEeecC-CCeEEEEECCCCCEEEEchhhEEEC
Confidence            468999999985 578999999999999976554 589999975  78999999999975

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2.7e-14  Score=96.86  Aligned_cols=58  Identities=19%  Similarity=0.487  Sum_probs=49.5

Q ss_pred             cceeeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhh
Q psy3210         192 PFRQIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNF  252 (272)
Q Consensus       192 P~~~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~  252 (272)
                      |.+...++|+|||.+.+.+||+|.+||+|+|+++.+   +||.+..  +|+.|+||++||++|
T Consensus         3 P~~~~~~~al~dy~a~~~~eLs~~~Gd~i~v~~~~~---~ww~~~~~~~g~~G~~P~~yV~~a   62 (62)
T d2iima1           3 PLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSG---EWWKAQSLTTGQEGFIPFNFVAKA   62 (62)
T ss_dssp             TTTTCEEEESSCBCCCSTTBCCBCTTCEEEEEECCS---SEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCCCcEEEECCCCCcCCcCCcCCCCCCEEEEeEEcC---CCEEEEeccCCeEeEEcHHHEEeC
Confidence            555667999999999999999999999999997764   4776653  489999999999875

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2.4e-14  Score=101.86  Aligned_cols=58  Identities=16%  Similarity=0.367  Sum_probs=51.7

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCC--cCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGE--QKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge--~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|.|+++.++  ..|||.++.+|+.||||++||+++.
T Consensus        14 ~~~~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~~~~W~~g~~~g~~G~vP~~yv~~~~   73 (79)
T d1uhca_          14 QVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTE   73 (79)
T ss_dssp             CCEEESSCBCCCSSSBCCBCTTCEEEEEESCCTTSCTTEEEEESSSCEEEEEGGGEEECC
T ss_pred             EEEEECccCCCCCCCCccCCCCCEEEEEEeecCCCCCCEEEEEECCCEEEEehhhEEECC
Confidence            468999999999999999999999999987543  2689999999999999999999765

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2.9e-14  Score=104.49  Aligned_cols=57  Identities=18%  Similarity=0.273  Sum_probs=51.3

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      .++|+|||.++..+||+|++||+|.|+.+...+.+||+++.+|+.||||++||+.+.
T Consensus         7 ~~rAlydy~~~~~~ELs~~~Gd~v~Vl~~~~~~~~w~~~~~~g~~G~~P~~Yve~~~   63 (93)
T d1uffa_           7 GYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMP   63 (93)
T ss_dssp             CEEESSCBCCCSSSCCCBCTTCEEEECSSCCCSSSEEEEEETTEEEEEETTTEEECC
T ss_pred             EEEECccCCCCCCCCccCcCCCEEEEEEeccCCCCEEEEEeCCcEEEEchHHEEECC
Confidence            579999999999999999999999999876544689999999999999999998653

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=3.7e-14  Score=108.46  Aligned_cols=56  Identities=27%  Similarity=0.415  Sum_probs=51.2

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNF  252 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~  252 (272)
                      ...++|+|||.+...+||+|.+||+|+|+.+.+  .|||.|..+|+.||||++||+++
T Consensus        14 g~~~~alydy~a~~~dELs~~~Gd~i~Vl~~~~--~gWw~g~~~g~~G~~P~~yv~~~   69 (118)
T d1ng2a2          14 GEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLL--DGWWVIRKDDVTGYFPSMYLQKS   69 (118)
T ss_dssp             CEEEEESSCBCCCSTTBCCBCTTCEEEEEECCT--TSEEEEEETTEEEEEEGGGEEET
T ss_pred             CcEEEECcCCCCCCCCEecCCCCCEEEEeEecC--CCeEEEEECCeEEEEehhhEEEC
Confidence            346789999999999999999999999998766  68999999999999999999865

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=2.1e-14  Score=96.82  Aligned_cols=55  Identities=22%  Similarity=0.432  Sum_probs=49.3

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGNF  252 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE~  252 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+++.+  .+||.|+..  |+.|+||+|||+.+
T Consensus         4 ~~~rAl~df~~~~~~eLs~~~Gd~i~v~~~~~--~~W~~~~~~~~g~~G~vP~nyve~i   60 (60)
T d1arka_           4 KIFRAMYDYMAADADEVSFKDGDAIINVQAID--EGWMYGTVQRTGRTGMLPANYVEAI   60 (60)
T ss_dssp             CCEECCSCCCCSSSSBCCCCTTCEECCSEECS--SSEEEEECTTTCCEEEEETTTCEEC
T ss_pred             cEEEECccCCCCCCCCcCCCCCCEEEEEEEcC--CCEEEEEECCCCCEEEEcHHHEEEC
Confidence            35799999999999999999999999998776  689999974  89999999999853

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=4.4e-14  Score=98.42  Aligned_cols=58  Identities=19%  Similarity=0.328  Sum_probs=50.7

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|||.+.+.+||+|++||+|.|+++..+ .+||.++.+ |+.|+||++||++..-
T Consensus         7 ~~~~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~-~~W~~~~~~~g~~G~~P~~yve~~~~   65 (71)
T d1k9aa1           7 TECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKD-PNWYKAKNKVGREGIIPANYVQKREG   65 (71)
T ss_dssp             CEEEESSCBCCSSSSBCCBCTTCEEEEEEECSS-TTEEEEECTTCCEEEEEGGGEEECCC
T ss_pred             CEEEEccCCCCCCCCCccCCCCCEEEEeEeccC-CCEEEEEeCCCCEEEEchHHeEEccc
Confidence            358999999999999999999999999987543 579999986 8999999999997643

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.45  E-value=5e-14  Score=96.99  Aligned_cols=56  Identities=32%  Similarity=0.531  Sum_probs=50.3

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGNFRL  254 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE~~~  254 (272)
                      .++|+|||.+...+||+|++||+|.|+++.+  .+||.++. +|+.|+||++||+++..
T Consensus         4 ~v~Alydf~a~~~~eLs~~~Gd~i~v~~~~~--~~Ww~~~~~~g~~G~~P~~yV~~~~~   60 (67)
T d1gl5a_           4 IVVAMYDFQATEAHDLRLERGQEYIILEKND--LHWWRARDKYGSEGYIPSNYVTGKKS   60 (67)
T ss_dssp             CEEECSCBCCSSSSBCCBCTTCEEEEEECSS--SSEEEEECSSSCEEEEETTSEESSTT
T ss_pred             EEEECCCCCCCCcCCcCCCCCCEEEEEEecC--CCcEEEEECCCCEEEEEhHHeEEecC
Confidence            5889999999999999999999999998876  67999974 58999999999997654

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=6.2e-14  Score=95.63  Aligned_cols=57  Identities=18%  Similarity=0.362  Sum_probs=50.5

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC--Ceeeeeeccchhhhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID--ERVSYFFQLYWGNFRLL  255 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~--g~~G~fP~~yVeE~~~m  255 (272)
                      +.+|+|||.+...+||+|++||+|+|+++.+  .+||.++..  |+.|+||++||++++..
T Consensus         4 ~~vAlydf~~~~~~eLs~~~Gd~i~v~~~~~--~~Ww~~~~~~~g~~G~vP~~yv~~~~s~   62 (64)
T d1fmka1           4 TFVALYDYESRTETDLSFKKGERLQIVNNTE--GDWWLAHSLSTGQTGYIPSNYVAPSDSI   62 (64)
T ss_dssp             EEEESSCBCCCSSSBCCBCTTCEEEESCCCS--SSEEEEEETTTCCEEEEEGGGEEETTSG
T ss_pred             EEEECccCCCcCcCCcCCCCCCEEEEEEEcC--CCcEEEEECCCCCEEEEehHHeEECccC
Confidence            4689999999999999999999999998776  579999874  79999999999987644

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=5.9e-14  Score=102.63  Aligned_cols=61  Identities=16%  Similarity=0.233  Sum_probs=53.6

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCC--cCCeEEEEeCCeeeeeeccchhhhhhhcc
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGE--QKGWWKGKIDERVSYFFQLYWGNFRLLSS  257 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge--~~gwW~G~~~g~~G~fP~~yVeE~~~mk~  257 (272)
                      .++|+|||.+...+||+|.+||+|.|+++.+.  ..+||.++.+|++||||++||++++.++.
T Consensus        19 ~~~a~~~f~a~~~~eLs~~~Gd~v~vl~~~d~~~~~~Ww~~~~~g~~G~~P~~yv~~~~~~~~   81 (92)
T d1ug1a_          19 LFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYNPRRS   81 (92)
T ss_dssp             EEEESSCCCCCSSSCCCCCTTCEEEEEESCCTTSCSSEEEEECSSSEEEEEGGGEEECCCCSS
T ss_pred             EEEEcCCcCCCCCCeEEEecccEEEEEEcccccccCCceEEEecccEEEEEhhhceecCCccc
Confidence            57999999999999999999999999987542  26899999999999999999998765553

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=4.8e-14  Score=94.64  Aligned_cols=55  Identities=16%  Similarity=0.371  Sum_probs=48.4

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+.+.+||+|.+||+|.|+++.   .+||.+.. +|+.|+||+|||+.++
T Consensus         2 ~~a~alydf~a~~~~ELs~~~Gd~i~v~~~~---~~ww~~~~~~g~~G~~P~nyve~i~   57 (59)
T d1i07a_           2 KYAKSKYDFVARNSSELSVMKDDVLEILDDR---RQWWKVRNASGDSGFVPNNILDIMR   57 (59)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEECGGG---CCEEEEECTTSCEEEEEGGGEEEEC
T ss_pred             eEEEEccCCCCCCCCeeeEcCCCEEEEEEEc---CCcEEEEEcCCCEEEECHHHeEECC
Confidence            4689999999999999999999999999764   36998875 6899999999999754

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=7.8e-14  Score=99.38  Aligned_cols=58  Identities=22%  Similarity=0.455  Sum_probs=50.8

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-----Ceeeeeeccchhhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-----ERVSYFFQLYWGNFRL  254 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-----g~~G~fP~~yVeE~~~  254 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+.+.+  .|||.|+.+     ++.||||++||+++..
T Consensus         7 g~~~~al~~y~~~~~~eLs~~~Gd~i~Vl~~~~--~~Ww~g~~~~~~~~~~~G~~P~~yv~~~~~   69 (80)
T d1ue9a_           7 GEIAQVTSAYVASGSEQLSLAPGQLILILKKNT--SGWWQGELQARGKKRQKGWFPASHVKLLGP   69 (80)
T ss_dssp             CEEEEECSCCCCCSTTBCCCCTTCEEEEEEECS--SSEEEEEECSCCSSCCEEEEETTSEEECCS
T ss_pred             CCEEEECcCCCCCCCCEeeEcCCCEEEEEEEeC--CCeEEEEEccCCCCCCEeEEEheeEEECCC
Confidence            346899999999999999999999999998876  689999975     4589999999997643

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=9.2e-14  Score=95.07  Aligned_cols=58  Identities=28%  Similarity=0.553  Sum_probs=49.7

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhhhhhhc
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGNFRLLS  256 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE~~~mk  256 (272)
                      ..++|+|||.+++.+||+|++||+|.|+++.   .+||.+..  +|+.|+||++||++++.+.
T Consensus         5 ~~vvAlydy~~~~~~eLs~~~Gd~i~v~~~~---~~ww~~~~~~~g~~G~vP~~yv~~~~~~e   64 (65)
T d1qcfa1           5 IIVVALYDYEAIHHEDLSFQKGDQMVVLEES---GEWWKARSLATRKEGYIPSNYVARVDSLE   64 (65)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEECC---TTEEEEEETTTCCEEEEEGGGEEETTCGG
T ss_pred             EEEEECCcCCCCCcCccCCCCCCEEEEEEEC---CCCEEEEEccCCCEEEEchHHeEECccCC
Confidence            4688999999999999999999999999754   35888765  4799999999999877654

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=2.5e-14  Score=98.57  Aligned_cols=56  Identities=25%  Similarity=0.522  Sum_probs=50.1

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+++.+||+|++||+|.|+.+.+  .+||.+.. +|+.|+||++||++++
T Consensus         9 ~~v~Alydy~a~~~~eLs~~~Gd~i~v~~~~~--~~Ww~~~~~~g~~G~vP~~yv~~~~   65 (67)
T d1awwa_           9 KKVVALYDYMPMNANDLQLRKGDEYFILEESN--LPWWRARDKNGQEGYIPSNYVTEAE   65 (67)
T ss_dssp             CEEEBSSCCCCSSSSSCCCCSSCEEECCCCCS--SSEECCBCTTSCBCCEETTTBCCSC
T ss_pred             EEEEECcCCCCCCcCCcCCCCCCEEEEEEEcC--CCeEEEEECCCCEEEEcHHHeEECc
Confidence            35899999999999999999999999998776  68999975 5899999999999764

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=6e-14  Score=97.07  Aligned_cols=55  Identities=24%  Similarity=0.492  Sum_probs=49.5

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|++||+|+|+.+.   .+||.++.+|+.|+||++||+++.
T Consensus         9 ~~~vAl~~y~~~~~~eLs~~~Gd~v~vl~~~---~~Ww~~~~~g~~G~vP~~yv~~~~   63 (69)
T d1uhfa_           9 EEYIALYPYSSVEPGDLTFTEGEEILVTQKD---GEWWTGSIGDRSGIFPSNYVKPKD   63 (69)
T ss_dssp             EEEECSSCBCCSSSSBCCBCTTCEEEECEEE---TTEEEECSTTCCEEECGGGCEECC
T ss_pred             cEEEECccCCCCCcCCcCCCCCCEEEEEEec---CCEEEEEECCcEEEEchhhEEECC
Confidence            4678999999999999999999999999764   479999999999999999999653

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.42  E-value=3.5e-14  Score=101.91  Aligned_cols=57  Identities=23%  Similarity=0.420  Sum_probs=49.2

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeCCc---CCeEEEEeC----------Ceeeeeeccchhhhh
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQ---KGWWKGKID----------ERVSYFFQLYWGNFR  253 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~---~gwW~G~~~----------g~~G~fP~~yVeE~~  253 (272)
                      .|+|+|||.+...+||+|++||+|.|+.+.+..   .|||.|...          |+.|+||+|||+.++
T Consensus        14 ~~~Alydy~a~~~~ELs~~~Gd~i~Vl~~~~~~~~~dgWw~G~~~~~~~~~~~~~g~~G~fP~nyVe~ie   83 (83)
T d1bb9a_          14 KVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ   83 (83)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEEC
T ss_pred             EEEEceeECCCCCCEecCcCCCEEEEEEccCCCcccCCEeEEEecCCccccccCCCCEEEEchhHeEEcC
Confidence            589999999999999999999999999875421   689999863          578999999999763

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=2.3e-14  Score=99.87  Aligned_cols=58  Identities=19%  Similarity=0.424  Sum_probs=50.2

Q ss_pred             eeeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCC-eeeeeeccchhhhhh
Q psy3210         195 QIIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDE-RVSYFFQLYWGNFRL  254 (272)
Q Consensus       195 ~~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g-~~G~fP~~yVeE~~~  254 (272)
                      ...++|+|||.+.+.+||+|.+||+|.|+++.+  .|||.|+.++ +.|+||++||+++..
T Consensus         6 ~~~v~Aly~f~a~~~~eLsf~~Gd~i~v~~~~~--~~Ww~g~~~~~~~G~fP~~yv~~~~~   64 (71)
T d2hspa_           6 KCAVKALFDYKAQREDELTFIKSAIIQNVEKQE--GGWWRGDYGGKKQLWFPSNYVEEMVN   64 (71)
T ss_dssp             SSCEECCSCCCCSSSSSCCCCTTCEEBSCCCBT--TTEECCBCSSCCSCCEETTTCCSCSC
T ss_pred             cEEEEEcccCCcCCcCCccCCCCCEEEEEEecC--CCEEEEEECCeEEEEEchHHeEEcCC
Confidence            346899999999999999999999999998877  6899999765 556999999997643

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.42  E-value=3.8e-14  Score=104.53  Aligned_cols=61  Identities=20%  Similarity=0.323  Sum_probs=51.0

Q ss_pred             eeeeeccCCCCCC-----CCCccCCCcEEEEeeeeCCcCCeEEEEe------CCeeeeeeccchhhhhhhccCC
Q psy3210         197 IAVAEFDFCPTEA-----NQLPLKQGCQVIVLSKEGEQKGWWKGKI------DERVSYFFQLYWGNFRLLSSLF  259 (272)
Q Consensus       197 ~~~alydf~~~~~-----~ELsl~~Gd~i~v~~k~ge~~gwW~G~~------~g~~G~fP~~yVeE~~~mk~l~  259 (272)
                      .++|+|||.+++.     .||+|++||+|.|+++.+  .+||+|+.      +|+.||||+|||+|.+...+..
T Consensus         3 ~vrAlydy~~~~d~~~~~~eLsf~kGdil~V~~~~d--~~WW~~~~~~~~~~~g~~G~~Psnyv~e~~~~~~~~   74 (96)
T d1kjwa1           3 YIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGD--EEWWQARRVHSDSETDDIGFIPSKRRVERREWSRLK   74 (96)
T ss_dssp             EEEESSCBCHHHHHCCCSSBCCBCTTCEEEEEECCS--SSEEEEEECCSSCCCSCCEEEECHHHHHHHHHTSCC
T ss_pred             EEEEcccCcCCcCCCCCCccceEcCCCEEEEeeecc--CceEEEEEccCCCCCCCEeEEeccceeeehhhhhcc
Confidence            5789999998763     489999999999999887  68999985      4789999999999876554433

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=8.8e-14  Score=104.24  Aligned_cols=61  Identities=26%  Similarity=0.409  Sum_probs=52.1

Q ss_pred             eeeeeccCCCCCCCCCccCCCcEEEEeeeeC-CcCCeEEEEeC--------Ceeeeeeccchhhhhhhcc
Q psy3210         197 IAVAEFDFCPTEANQLPLKQGCQVIVLSKEG-EQKGWWKGKID--------ERVSYFFQLYWGNFRLLSS  257 (272)
Q Consensus       197 ~~~alydf~~~~~~ELsl~~Gd~i~v~~k~g-e~~gwW~G~~~--------g~~G~fP~~yVeE~~~mk~  257 (272)
                      .++|+|||.+.+.+||+|++||+|.|+.+.. .+.+||.|++.        |+.||||++||++++....
T Consensus        23 ~~~Alydy~~~~~~eL~f~~Gd~i~Vl~k~~~~~~~WW~g~~~g~~~~~~~g~~G~fP~nyV~~~~~~~~   92 (106)
T d1i1ja_          23 MAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKP   92 (106)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEEECSC
T ss_pred             EEEEccccCCCCCCCccCCCCCEEEEEEecCCCCcceEEEEecCccccccCCcccccccccEEEccccCc
Confidence            5899999999999999999999999998743 23789999875        4689999999998765543

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.4e-13  Score=91.62  Aligned_cols=52  Identities=19%  Similarity=0.460  Sum_probs=47.2

Q ss_pred             eeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhh
Q psy3210         198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGN  251 (272)
Q Consensus       198 ~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE  251 (272)
                      ++|+|||.+.+.+||+|++||+|.|+++.+  .+||.++.  +|+.|+||++||++
T Consensus         3 ~vAl~dy~a~~~~eLs~~~Gd~i~v~~~~~--~~Ww~~~~~~~g~~G~vP~~yv~p   56 (57)
T d1efna_           3 FVALYDYEAITEDDLSFHKGEKFQILNSSE--GDWWEARSLTTGETGYIPSNYVAP   56 (57)
T ss_dssp             EEESSCBCCSSTTBCCBCTTCEEEEEECSS--CSEEEEEETTTTEEEEEEGGGEEE
T ss_pred             EEECCCCCCCCcCCcCCCCCCEEEEEEecC--CCCEEEEECCCCCEEEEeHHHeEE
Confidence            579999999999999999999999998776  57999986  48999999999985

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

Probab=99.40  E-value=1e-13  Score=107.96  Aligned_cols=75  Identities=16%  Similarity=0.292  Sum_probs=59.3

Q ss_pred             cccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeC---CeeeEEEEEEecCCCcceEEeeccc
Q psy3210          85 LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTD---EKVKHMKVYEKEMDGVPQYFLSQSR  161 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~---~~v~H~~I~~~~~g~~~~~~i~~~~  161 (272)
                      +-...||+|.|+|++||++|++.++|+||||.|++.     +|.|+||++..   +.|+||+|...+++          .
T Consensus         6 lw~~~~~~G~isr~~ae~~L~~~~~GtFLvR~S~s~-----~g~~~ls~~~~~~~~~v~h~~i~~~~~~----------~   70 (131)
T d1uura3           6 LWQEGIIYGYMGRQEVNDALQNQDPGTFIIRFSERN-----PGQFGIAYIGVEMPARIKHYLVQPNDTA----------A   70 (131)
T ss_dssp             HHHHTSSCBSCCHHHHHHTTSSCCTTCEEEEECSSS-----TTCEEEEEECSSSSCCEEEEECCGGGSB----------T
T ss_pred             hhhCCcEEccCCHHHHHHHHhcCCCCeEEEEecCCC-----CCcEEEEEEEecCCCcEEEEEEeecCCC----------c
Confidence            445689999999999999999889999999999754     59999999974   68999999765432          2


Q ss_pred             ccchhhhhhhhhh
Q psy3210         162 YFRSIVELICCYE  174 (272)
Q Consensus       162 ~F~sL~eLV~~y~  174 (272)
                      .|.++.++|..|.
T Consensus        71 ~~~sl~d~l~~~~   83 (131)
T d1uura3          71 AKKTFPDFLSEHS   83 (131)
T ss_dssp             TTBCHHHHHTTCT
T ss_pred             ccccHHHHHHhHH
Confidence            3566666655443

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.39  E-value=2e-13  Score=90.53  Aligned_cols=52  Identities=10%  Similarity=0.293  Sum_probs=44.6

Q ss_pred             eeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchh
Q psy3210         198 AVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWG  250 (272)
Q Consensus       198 ~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVe  250 (272)
                      ++|+|||.++..+||+|++||+|.|+++..+ .+||.+..  +|+.|+||++||+
T Consensus         2 aralydf~a~~~~ELs~~~Gd~i~v~~~~~~-~~w~~~~~~~~g~~G~~P~nyve   55 (56)
T d1zuua1           2 NKVLYAYVQKDDDEITITPGDKISLVARDTG-SGWTKINNDTTGETGLVPTTYIR   55 (56)
T ss_dssp             CEECSCBCCCSTTBCCBCTTCCEEEEECCSS-SSEEEEEETTTTEEEEEEGGGEE
T ss_pred             CEEeeeeCCCCCCEeeECCCCEEEEEEEecC-CCcEEEeCCCCceEEEEehhhEE
Confidence            7899999999999999999999999976553 45666554  5899999999997

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=9e-14  Score=99.53  Aligned_cols=59  Identities=19%  Similarity=0.183  Sum_probs=50.1

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeC-------------CcCCeEEEEe--CCeeeeeeccchhhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEG-------------EQKGWWKGKI--DERVSYFFQLYWGNFRL  254 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~g-------------e~~gwW~G~~--~g~~G~fP~~yVeE~~~  254 (272)
                      ..++|+|||.+...+||+|++||+|.|+.+..             ++.|||+|+.  .|+.|+||++||+.+..
T Consensus         4 ~~~raly~y~~~~~~eLs~~~Gd~i~V~~~~~~~~~~~~~~~~~~~~~GW~~G~~~~~g~~G~FP~nYVe~i~~   77 (83)
T d1phta_           4 YQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIGR   77 (83)
T ss_dssp             EEEEECSCBCCSSTTBCCBCTTCEEEEEHHHHHTTTCCTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEEE
T ss_pred             CEEEEcCccCCCCCCcccccCCCEEEEEeccccccccccccccccCCCCeEEEEECCCCcEeeEehhhEEEcCC
Confidence            46899999999999999999999999997531             1268999986  58999999999997654

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=9.4e-14  Score=102.23  Aligned_cols=59  Identities=20%  Similarity=0.434  Sum_probs=49.5

Q ss_pred             eeeeeeeeccCCCCC------CCCCccCCCcEEEEeeeeCCcCCeEEEEe-CCeeeeeeccchhhhh
Q psy3210         194 RQIIAVAEFDFCPTE------ANQLPLKQGCQVIVLSKEGEQKGWWKGKI-DERVSYFFQLYWGNFR  253 (272)
Q Consensus       194 ~~~~~~alydf~~~~------~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~-~g~~G~fP~~yVeE~~  253 (272)
                      ....++|+|||++++      .+||+|++||+|.|+.+.++ .+||.+.. +|++||||+|||+++.
T Consensus        16 ~~~~~~Alydy~~~~~~~~~~e~ELsf~~Gd~i~v~~~~~~-~gW~~~~~~~G~~G~~P~nyve~~~   81 (96)
T d1wiea_          16 KVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDE-DGFYEGELLDGQRGLVPSNFVDFVQ   81 (96)
T ss_dssp             CEEEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESSCCS-SSCCEEEETTCCBCBCCTTSEECCC
T ss_pred             CceEEEEeeeecCcccCCCCCCcEeeEcCCCEEEEEEeeCC-CceEEEEeCCCCEEEEehHHeEECC
Confidence            345789999998865      47999999999999987664 57999975 6899999999999764

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.37  E-value=4.4e-13  Score=93.99  Aligned_cols=56  Identities=14%  Similarity=0.065  Sum_probs=49.6

Q ss_pred             eeeeeeccCCCCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC------Ceeeeeeccchhhhh
Q psy3210         196 IIAVAEFDFCPTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID------ERVSYFFQLYWGNFR  253 (272)
Q Consensus       196 ~~~~alydf~~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~------g~~G~fP~~yVeE~~  253 (272)
                      ..++|+|||.+...+||+|.+||+|+|+++.+  .+||.++..      |+.||||++||+++.
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~--~~Ww~v~~~~~~~~~g~~G~vP~~yve~~~   69 (74)
T d1wfwa_           8 STMTVIKDYYALKENEICVSQGEVVQVLAVNQ--QNMCLVYQPASDHSPAAEGWVPGSILAPFS   69 (74)
T ss_dssp             CEEECCSCBCCCSSSCCCBCTTCEEEEEEECT--TSEEEEEECSCSSSSSEEEEEEGGGCCBCC
T ss_pred             CEEEEeEEECCCCCCCccCccCCEEEEEEEcC--CCCEEEEeCccCCcCCeeeEEchHHeEECC
Confidence            46899999999999999999999999998876  689998863      689999999999754

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.36  E-value=4.8e-13  Score=92.36  Aligned_cols=53  Identities=21%  Similarity=0.288  Sum_probs=42.9

Q ss_pred             eeeeccCC------CCCCCCCccCCCcEEEEeeeeCCcCCeEEEEe--CCeeeeeeccchhh
Q psy3210         198 AVAEFDFC------PTEANQLPLKQGCQVIVLSKEGEQKGWWKGKI--DERVSYFFQLYWGN  251 (272)
Q Consensus       198 ~~alydf~------~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~--~g~~G~fP~~yVeE  251 (272)
                      ++|+++|.      +.+.+||+|++||+|+|+.+..+ .|||+|+.  +|+.||||+|||+.
T Consensus         7 ~~a~~~y~~~~~~~~~~~~eLsf~~GD~i~Vl~~~~~-~gWw~G~~~~~g~~G~fP~nyVeP   67 (69)
T d1gcqc_           7 MEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAE-HNWWEGRNTATNEVGWFPCNRVHP   67 (69)
T ss_dssp             EEECSCBSSSSCCGGGCSCBCCBCTTCEEEEEECCTT-CSEEEEEETTTTEEEEEEGGGEEE
T ss_pred             EEEeeeEeccCCCCCCCCCEeeEcCCCEEEEEEEecC-CCEEEEEECCCCCEEEEeHHHEEE
Confidence            44555554      46789999999999999975443 68999997  58999999999985

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=2.8e-14  Score=111.99  Aligned_cols=83  Identities=19%  Similarity=0.265  Sum_probs=69.2

Q ss_pred             cccccEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEeeCCeeeEEEEEEecCCCcceEEeecccccc
Q psy3210          85 LSEYLWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKTDEKVKHMKVYEKEMDGVPQYFLSQSRYFR  164 (272)
Q Consensus        85 l~~~~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~~~~i~~~~~F~  164 (272)
                      +-...||+|.|+|++||++|.+.++|+||||.|++    +..|.|+||++..+...|++|...+     .|... ...|.
T Consensus         4 lW~~gw~~G~isr~~a~~~L~~~~~GtFLvR~S~~----s~~G~~tis~~~~~~~~~~~i~~~~-----p~t~~-dl~~~   73 (141)
T d1bg1a3           4 LWNEGYIMGFISKERERAILSTKPPGTFLLRFSES----SKEGGVTFTWVEKDISGSTQIQSVE-----PYTKQ-QLNNM   73 (141)
T ss_dssp             HHHSSCCCBCCCTTGGGTTTTTSCTTCBCEEECSS----CSSCCEEECCCCSSSCSSCCCCCCC-----CBCGG-GGTSS
T ss_pred             eecCCeEEEeCCHHHHHHHhhCCCCCeEEEEecCC----ccCCCEEEEEEecCcCCceEEeecC-----CeecC-ccccC
Confidence            45678999999999999999999999999999963    2369999999999999999997654     25443 34699


Q ss_pred             hhhhhhhhhhccc
Q psy3210         165 SIVELICCYERNS  177 (272)
Q Consensus       165 sL~eLV~~y~~~~  177 (272)
                      ||.|+|.||+...
T Consensus        74 sL~dlI~~y~~~~   86 (141)
T d1bg1a3          74 SFAEIIMGYKIMD   86 (141)
T ss_dssp             CHHHHTTSCCCBC
T ss_pred             CHHHHHHhhhhhc
Confidence            9999999998655

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.32  E-value=8.4e-13  Score=96.58  Aligned_cols=54  Identities=9%  Similarity=0.267  Sum_probs=47.9

Q ss_pred             eeeeeeccCCCCCCCC-------CccCCCcEEEEeeeeCCcCCeEEEEe---CCeeeeeeccchhh
Q psy3210         196 IIAVAEFDFCPTEANQ-------LPLKQGCQVIVLSKEGEQKGWWKGKI---DERVSYFFQLYWGN  251 (272)
Q Consensus       196 ~~~~alydf~~~~~~E-------Lsl~~Gd~i~v~~k~ge~~gwW~G~~---~g~~G~fP~~yVeE  251 (272)
                      ..++|+|||++.+.++       |+|.+||+|.|+++.+  .+||.|+.   +|+.|+||++++-|
T Consensus        22 ~~vrAlydY~~~~dd~~P~~~~~LsF~~GDii~v~~~~d--~~WW~gr~~~~~g~~G~~PS~~~~e   85 (96)
T d1t0ha_          22 FAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFN--NDWWIGRLVKEGCEIGFIPSPVKLE   85 (96)
T ss_dssp             EEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECS--SSEEEEEESSTTCCCEEEECHHHHH
T ss_pred             EEEEEeeccCCCCCCCCccccccccCCCCCEEEEeeeeC--CCceEEEEcCCCCCEEEecCcHHHH
Confidence            3589999999999888       9999999999999988  67999998   47899999998544

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.12  E-value=3.1e-11  Score=95.17  Aligned_cols=53  Identities=9%  Similarity=0.308  Sum_probs=47.3

Q ss_pred             eeeeeccCCCCCCCC-------CccCCCcEEEEeeeeCCcCCeEEEEe---CCeeeeeeccchhh
Q psy3210         197 IAVAEFDFCPTEANQ-------LPLKQGCQVIVLSKEGEQKGWWKGKI---DERVSYFFQLYWGN  251 (272)
Q Consensus       197 ~~~alydf~~~~~~E-------Lsl~~Gd~i~v~~k~ge~~gwW~G~~---~g~~G~fP~~yVeE  251 (272)
                      .++|+|||.+.+.++       |+|++||+|+|+++.+  .+||.|+.   +|+.|+||++|+.|
T Consensus        25 ~vra~~dy~~~~d~~~p~~~~~LsF~kGDii~V~~~~d--~~WW~gr~~~~~g~~G~iPS~~~~e   87 (145)
T d1vyva1          25 AVKTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKYN--NDWWIGRLVKEGCEIGFIPSPLRLE   87 (145)
T ss_dssp             EEEESSCBCTTSCCSCSSTTCBCCBCTTCEEEEEEEEE--TTEEEEEESSTTCCCEEEECHHHHH
T ss_pred             EEEEeeeeCCccCCcCCcccccccCcCCCEEEEeeccC--CCcEEEEEcCCCCceeEeCCchhhh
Confidence            489999999998887       9999999999999987  68999997   58999999987654

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.86  E-value=6.8e-10  Score=86.13  Aligned_cols=53  Identities=9%  Similarity=0.307  Sum_probs=46.1

Q ss_pred             eeeeeccCCCCCCCC-------CccCCCcEEEEeeeeCCcCCeEEEEe---CCeeeeeeccchhh
Q psy3210         197 IAVAEFDFCPTEANQ-------LPLKQGCQVIVLSKEGEQKGWWKGKI---DERVSYFFQLYWGN  251 (272)
Q Consensus       197 ~~~alydf~~~~~~E-------Lsl~~Gd~i~v~~k~ge~~gwW~G~~---~g~~G~fP~~yVeE  251 (272)
                      .++|+|||++...++       |+|++||+|.|+++.+  .+||.|+.   +|+.|+||+.|+.|
T Consensus        25 ~vra~~~Y~~~~d~~~P~~~~~LsF~~gdil~v~~~~d--~~WW~~r~~~~~~~~G~iPs~~~lE   87 (136)
T d1vyua1          25 AVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYS--NDWWIGRLVKEGGDIAFIPSPQRLE   87 (136)
T ss_dssp             EEEESSCEEGGGCTTCSSTTCBCEECTTCEEEEEEECS--SSEEEEEESSTTCCCEEEECHHHHH
T ss_pred             EEEEeeccCCCCCCCCcccCcccCCCCCCEEEEEeccC--CCcEEEEeccCCCceeccCchHHHh
Confidence            488999999988777       8999999999999988  67999996   36889999998544

>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase C-delta (PKCdelta)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.68  E-value=5e-06  Score=52.56  Aligned_cols=29  Identities=17%  Similarity=0.248  Sum_probs=25.2

Q ss_pred             ehhcccCCCceecCcCCcchhcccccCCC
Q psy3210          14 VTLKSRGLRPLCSQACYLACHKQCIPHTG   42 (272)
Q Consensus        14 ~~~~g~~~qg~~c~~c~~~~h~~c~~~~~   42 (272)
                      .+|.|+++|||.|..|+..+|++|...++
T Consensus        19 ~~i~g~~~qg~~C~~C~~~~H~~C~~~v~   47 (50)
T d1ptqa_          19 SLLWGLVKQGLKCEDCGMNVHHKCREKVA   47 (50)
T ss_dssp             CBCCSSSSCEEEETTTCCEECHHHHTTSC
T ss_pred             CcccCcccCcEECCCCCCeeChhHccccc
Confidence            46799999999999999999999965543

>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Beta-chimaerin, middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=1.1e-05  Score=53.28  Aligned_cols=33  Identities=24%  Similarity=0.364  Sum_probs=27.9

Q ss_pred             ehhcccCCCceecCcCCcchhcccccC-CCCCCC
Q psy3210          14 VTLKSRGLRPLCSQACYLACHKQCIPH-TGRCGT   46 (272)
Q Consensus        14 ~~~~g~~~qg~~c~~c~~~~h~~c~~~-~~~C~~   46 (272)
                      .+|.|++.|||.|..|+..+|++|... +..|+.
T Consensus        23 ~~i~g~~~~g~~C~~C~~~~H~~C~~~v~~~C~~   56 (62)
T d1xa6a3          23 NFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQP   56 (62)
T ss_dssp             CBCCTTTTCEECCSSSCCCBCTGGGTTSCSCCCT
T ss_pred             ccccccccCeEEcCCCCchhhHHHHhhCCCcCCC
Confidence            467899999999999999999999555 456865

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=97.59  E-value=1.2e-05  Score=53.79  Aligned_cols=33  Identities=18%  Similarity=0.434  Sum_probs=27.6

Q ss_pred             ehhcccCCCceecCcCCcchhccccc-CCCCCCC
Q psy3210          14 VTLKSRGLRPLCSQACYLACHKQCIP-HTGRCGT   46 (272)
Q Consensus        14 ~~~~g~~~qg~~c~~c~~~~h~~c~~-~~~~C~~   46 (272)
                      .++.|+++|||.|..|++.+|++|+. ++..|+.
T Consensus        27 ~~i~g~~~~g~~C~~C~~~~H~~C~~~v~~~C~~   60 (66)
T d1tbna_          27 SLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGV   60 (66)
T ss_dssp             CBCCTTSSSCEEETTTCCEECTTTTTTSCCCSSC
T ss_pred             CcccCcccCccccCcccCeEChHHhccccccCCC
Confidence            45789999999999999999999954 4567854

>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Kinase suppressor of Ras, Ksr
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=1.4e-05  Score=50.25  Aligned_cols=25  Identities=24%  Similarity=0.673  Sum_probs=22.8

Q ss_pred             CCceecCcCCcchhcccccCCCCCC
Q psy3210          21 LRPLCSQACYLACHKQCIPHTGRCG   45 (272)
Q Consensus        21 ~qg~~c~~c~~~~h~~c~~~~~~C~   45 (272)
                      .|||.|+.|++.+|++|...++.|+
T Consensus        25 ~qg~~C~~C~~~~Hk~C~~~~P~C~   49 (49)
T d1kbea_          25 IFGVKCKHCRLKCHNKCTKEAPACR   49 (49)
T ss_dssp             CCEEEETTTTEEESSSCTTTSCCCC
T ss_pred             hCcCCcCCCCChHhHhhcccCCCCC
Confidence            5999999999999999988888884

>d1bf5a3 d.93.1.1 (A:569-710) STAT-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00027  Score=53.84  Aligned_cols=43  Identities=23%  Similarity=0.413  Sum_probs=36.1

Q ss_pred             cEeeeeCCHHHHHHhcccCCCceEEEEeCCCCCCCCCCCceEEEEee
Q psy3210          89 LWFVGEMGREKATSLLEREADGTYLLRIRPQGPTHPNETIYALSLKT  135 (272)
Q Consensus        89 ~Wf~g~isR~~Ae~lL~~~~~G~FLVR~s~~~~~~~~~~~y~LSv~~  135 (272)
                      .|..|.|+|++|+++|++.+.|+||+|-|++.    .+|..+++...
T Consensus         8 G~I~GFIsK~~a~~~L~~~~~GTFLLRFSdS~----~~GgitiawV~   50 (142)
T d1bf5a3           8 GCIMGFISKERERALLKDQQPGTFLLRFSESS----REGAITFTWVE   50 (142)
T ss_dssp             TCCCCCCCHHHHHHHTTTCCSCCCCEEECSSC----SSCCEEEEECC
T ss_pred             CEEEEEecHHHHHHHhhCCCCceEEEEeccCc----cCCceEEEEEE
Confidence            45689999999999999999999999999742    24888888765

>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: RAF-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00017  Score=45.53  Aligned_cols=25  Identities=24%  Similarity=0.487  Sum_probs=20.5

Q ss_pred             CCceecCcCCcchhcccccC-CCCCC
Q psy3210          21 LRPLCSQACYLACHKQCIPH-TGRCG   45 (272)
Q Consensus        21 ~qg~~c~~c~~~~h~~c~~~-~~~C~   45 (272)
                      .|||.|+.|+..+|++|... +..|-
T Consensus        25 ~~g~~C~~C~~~~H~~C~~~v~~~C~   50 (52)
T d1faqa_          25 LNGFRCQTCGYKFHEHCSTKVPTMCV   50 (52)
T ss_dssp             CSEEECTTTTCCBCSTTSSSSSSCCC
T ss_pred             ccCCCcCCCCChhhhhhhcccccccc
Confidence            49999999999999999554 45563

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Diacylglycerol kinase delta
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00038  Score=48.47  Aligned_cols=34  Identities=21%  Similarity=0.190  Sum_probs=28.1

Q ss_pred             eehhcccC-CCceecCcCCcchhccc-ccCCCCCCC
Q psy3210          13 IVTLKSRG-LRPLCSQACYLACHKQC-IPHTGRCGT   46 (272)
Q Consensus        13 ~~~~~g~~-~qg~~c~~c~~~~h~~c-~~~~~~C~~   46 (272)
                      ..++.|.+ .|||+|..|+..+|++| ..++..|..
T Consensus        45 ~~~i~~~~~~qg~~C~~C~~~~H~~C~~~v~~~C~~   80 (84)
T d1r79a_          45 DKTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKCSG   80 (84)
T ss_dssp             CCBCCCTTTCCCEEESSSCCEECHHHHHHCCSCBCC
T ss_pred             CcccCCccccCcEecCcCCchhhhhhcCCCCCcCcC
Confidence            35677776 79999999999999999 556778975

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.25  E-value=0.0099  Score=49.41  Aligned_cols=22  Identities=23%  Similarity=0.234  Sum_probs=20.1

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      ..|.+|+++|++++|||||+|.
T Consensus        53 ~~~~~E~~~l~~l~HpnIv~~~   74 (272)
T d1qpca_          53 DAFLAEANLMKQLQHQRLVRLY   74 (272)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEE
T ss_pred             HHHHHHHHHHHhCCCCCEeEEE
Confidence            3589999999999999999986

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.86  E-value=0.035  Score=46.13  Aligned_cols=55  Identities=20%  Similarity=0.168  Sum_probs=34.7

Q ss_pred             CCCCCCccCCCcEEEEeeeeCCcCCeEEEEeCCeeee--e------e---ccchhhhhhhccCCCCCcccce
Q psy3210         207 TEANQLPLKQGCQVIVLSKEGEQKGWWKGKIDERVSY--F------F---QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       207 ~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~g~~G~--f------P---~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .+.+++.+.+  . ...|.+|.   .|+|+.++...+  +      +   ..|.+|+++|++++|||||++.
T Consensus         5 i~~~~~~~~~--~-lG~G~fg~---Vy~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~   70 (276)
T d1uwha_           5 IPDGQITVGQ--R-IGSGSFGT---VYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM   70 (276)
T ss_dssp             CCTTCCCCCS--E-EEECSSCE---EEEEESSSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             cccccEEEEE--E-EeeCCCcE---EEEEEECCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeee
Confidence            3455555533  2 13344553   677776643221  1      1   3577899999999999999986

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.03  E-value=0.019  Score=48.12  Aligned_cols=23  Identities=9%  Similarity=0.005  Sum_probs=20.4

Q ss_pred             ccchhhhhhhccCCCCCccccee
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      .+|.+|+++|++++|||||++.-
T Consensus        58 ~~~~~E~~il~~l~HpnIv~~~~   80 (287)
T d1opja_          58 EEFLKEAAVMKEIKHPNLVQLLG   80 (287)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             HHHHHHHHHHHhCCCCCEecCCc
Confidence            46888999999999999999863

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.71  E-value=0.022  Score=47.36  Aligned_cols=21  Identities=14%  Similarity=0.229  Sum_probs=19.4

Q ss_pred             cchhhhhhhccCCCCCcccce
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .|++|+++|++++|||||++.
T Consensus        55 ~~~~E~~il~~l~H~nIv~~~   75 (283)
T d1mqba_          55 DFLGEAGIMGQFSHHNIIRLE   75 (283)
T ss_dssp             HHHHHHHHHHTCCCTTBCCEE
T ss_pred             HHHHHHHHHHhcCCCCEeeee
Confidence            578999999999999999985

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.55  E-value=0.037  Score=46.24  Aligned_cols=22  Identities=14%  Similarity=0.147  Sum_probs=20.3

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      ..|++|+++|++++|+|||+|.
T Consensus        57 ~~~~~E~~~l~~l~h~nIv~~~   78 (285)
T d1fmka3          57 EAFLQEAQVMKKLRHEKLVQLY   78 (285)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEE
T ss_pred             HHHHHHHHHHHhcccCCEeEEE
Confidence            5699999999999999999985

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.30  E-value=0.032  Score=45.85  Aligned_cols=24  Identities=13%  Similarity=-0.007  Sum_probs=21.2

Q ss_pred             eccchhhhhhhccCCCCCccccee
Q psy3210         245 FQLYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       245 P~~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      ..+|.+|+++|++++|||||+|.-
T Consensus        43 ~~~~~~Ev~~~~~l~HpnIv~~~g   66 (258)
T d1k2pa_          43 EDEFIEEAKVMMNLSHEKLVQLYG   66 (258)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             HHHHHHHHHHHHhcCCCceeeEEE
Confidence            457899999999999999999863

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.12  E-value=0.028  Score=46.24  Aligned_cols=22  Identities=14%  Similarity=0.060  Sum_probs=20.3

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .+|++|+++|++++|||||+|.
T Consensus        45 ~~~~~E~~~l~~l~HpnIv~~~   66 (263)
T d1sm2a_          45 EDFIEEAEVMMKLSHPKLVQLY   66 (263)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEE
T ss_pred             HHHHHHHHHHHhcCCCCccccc
Confidence            5689999999999999999986

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.63  E-value=0.059  Score=45.57  Aligned_cols=23  Identities=9%  Similarity=-0.136  Sum_probs=20.0

Q ss_pred             ccchhhhhhhccCCCCCccccee
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      ..+..|+++|++++|||||++.-
T Consensus        49 ~~~~~Ei~il~~l~HpnIv~l~~   71 (322)
T d1s9ja_          49 NQIIRELQVLHECNSPYIVGFYG   71 (322)
T ss_dssp             HHHHHHGGGGGGCCCTTBCCEEE
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEE
Confidence            35778999999999999999863

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.069  Score=43.88  Aligned_cols=37  Identities=14%  Similarity=0.005  Sum_probs=27.0

Q ss_pred             eEEEEeCCee--------eeeeccchhhhhhhccCCCCCccccee
Q psy3210         232 WWKGKIDERV--------SYFFQLYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       232 wW~G~~~g~~--------G~fP~~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      .|++...|..        .-....|.+|+++|++++|||||++.-
T Consensus        23 Vy~~~~~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g   67 (262)
T d1byga_          23 VMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLG   67 (262)
T ss_dssp             EEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEE
T ss_pred             EEEEEECCeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            6777766421        112356889999999999999999874

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.33  E-value=0.046  Score=45.64  Aligned_cols=22  Identities=23%  Similarity=0.114  Sum_probs=19.9

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      ..|.+|+++|++++|||||+|.
T Consensus        54 ~~~~~E~~il~~l~HpnIv~l~   75 (288)
T d2jfla1          54 EDYMVEIDILASCDHPNIVKLL   75 (288)
T ss_dssp             GGTHHHHHHHHHCCCTTBCCEE
T ss_pred             HHHHHHHHHHHhCCCCCCCeEE
Confidence            4678899999999999999985

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.32  E-value=0.13  Score=43.11  Aligned_cols=22  Identities=14%  Similarity=0.066  Sum_probs=19.8

Q ss_pred             cchhhhhhhccCCCCCccccee
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      .|++|+++|+++.|+|||++.-
T Consensus        69 ~~~~E~~il~~l~h~nIv~~~~   90 (308)
T d1p4oa_          69 EFLNEASVMKEFNCHHVVRLLG   90 (308)
T ss_dssp             HHHHHHHHGGGCCCTTBCCEEE
T ss_pred             HHHHHHHHHHHcCCCCEeeeee
Confidence            4789999999999999999864

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.29  E-value=0.12  Score=42.86  Aligned_cols=21  Identities=19%  Similarity=0.006  Sum_probs=19.3

Q ss_pred             cchhhhhhhccCCCCCcccce
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .|++|+++|++++|||||+|.
T Consensus        55 ~~~~E~~il~~l~HpnIv~l~   75 (285)
T d1u59a_          55 EMMREAQIMHQLDNPYIVRLI   75 (285)
T ss_dssp             HHHHHHHHHHHCCCTTBCCEE
T ss_pred             HHHHHHHHHHhCCCCCEeeEe
Confidence            588899999999999999985

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.13  E-value=0.096  Score=43.15  Aligned_cols=22  Identities=18%  Similarity=0.095  Sum_probs=19.9

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      ..|.+|+++|++++|||||++.
T Consensus        56 ~~~~~Ei~~l~~l~H~nIv~~~   77 (273)
T d1u46a_          56 DDFIREVNAMHSLDHRNLIRLY   77 (273)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEE
T ss_pred             HHHHHHHHHHHhCCCCCEEEEE
Confidence            3688999999999999999986

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.10  E-value=0.063  Score=44.65  Aligned_cols=21  Identities=10%  Similarity=-0.027  Sum_probs=18.9

Q ss_pred             cchhhhhhhccCCCCCcccce
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .+.+|+++|++++|||||++.
T Consensus        59 ~~~~E~~il~~l~HpnIv~~~   79 (293)
T d1jksa_          59 DIEREVSILKEIQHPNVITLH   79 (293)
T ss_dssp             HHHHHHHHHHHCCCTTBCCEE
T ss_pred             HHHHHHHHHHhCCCCCCCcEE
Confidence            467899999999999999986

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.55  E-value=0.17  Score=41.54  Aligned_cols=23  Identities=9%  Similarity=-0.172  Sum_probs=19.9

Q ss_pred             ccchhhhhhhccCCCCCccccee
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      ..+.+|+++|++++|||||++.-
T Consensus        48 ~~~~~Ei~~l~~l~HpnIv~~~~   70 (271)
T d1nvra_          48 ENIKKEICINKMLNHENVVKFYG   70 (271)
T ss_dssp             -CHHHHHHHHHTCCCTTBCCEEE
T ss_pred             HHHHHHHHHHHhCCCCCEeeEee
Confidence            46788999999999999999863

>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein adap) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn-binding protein (T-cell adapter protein adap)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.24  E-value=0.41  Score=31.76  Aligned_cols=42  Identities=14%  Similarity=0.195  Sum_probs=34.3

Q ss_pred             CCCCCCCccCCCcEEEEeeeeCCcCCeEEEEeC-Ceeeeeeccch
Q psy3210         206 PTEANQLPLKQGCQVIVLSKEGEQKGWWKGKID-ERVSYFFQLYW  249 (272)
Q Consensus       206 ~~~~~ELsl~~Gd~i~v~~k~ge~~gwW~G~~~-g~~G~fP~~yV  249 (272)
                      .+...+|+++.||.|.|+..-+  .|-|-++.. |+-|+++.++|
T Consensus        33 k~g~~dL~vk~GE~ldVIr~t~--~~k~LcRN~~GkYGYV~~~~l   75 (77)
T d1ri9a_          33 KWGTRDLQVKPGESLEVIQTTD--DTKVLCRNEEGKYGYVLRSYL   75 (77)
T ss_dssp             CCCTTBCCCCTTCBCEEEEESS--SSEEEEEETTTEEEEEEGGGS
T ss_pred             cCCcccCCcCCCCEEEEEEeCC--CCeEEEEcCCCcEEEEEeeee
Confidence            3467899999999999997654  678888864 89999988775

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.02  E-value=0.065  Score=44.88  Aligned_cols=22  Identities=5%  Similarity=0.004  Sum_probs=19.9

Q ss_pred             cchhhhhhhccCCCCCccccee
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      .|+.|+++|++++|||||+|.-
T Consensus        73 ~~~~E~~~l~~l~HpnIv~l~g   94 (299)
T d1jpaa_          73 DFLSEASIMGQFDHPNVIHLEG   94 (299)
T ss_dssp             HHHHHHHHHTTCCCTTBCCEEE
T ss_pred             HHHHHHHHHHhCCCCCCccEEE
Confidence            5889999999999999999863

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.46  E-value=0.069  Score=44.18  Aligned_cols=22  Identities=14%  Similarity=0.004  Sum_probs=19.8

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      ..|+.|+++|++++|||||++.
T Consensus        53 ~~~~~E~~il~~l~HpnIv~~~   74 (277)
T d1xbba_          53 DELLAEANVMQQLDNPYIVRMI   74 (277)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEE
T ss_pred             HHHHHHHHHHHhCCCCCCceEE
Confidence            3588999999999999999985

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.43  E-value=0.2  Score=41.96  Aligned_cols=22  Identities=14%  Similarity=-0.074  Sum_probs=18.2

Q ss_pred             cchhhhhhhccCCCCCccccee
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      .+..|+++|++++|||||++.-
T Consensus        53 ~~~~Ei~il~~l~HpnIv~l~~   74 (307)
T d1a06a_          53 SMENEIAVLHKIKHPNIVALDD   74 (307)
T ss_dssp             --CHHHHHHHTCCCTTBCCEEE
T ss_pred             HHHHHHHHHHhCCCCCCCcEEE
Confidence            4667999999999999999864

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.61  E-value=0.17  Score=42.93  Aligned_cols=53  Identities=13%  Similarity=0.008  Sum_probs=33.5

Q ss_pred             CCCcEEEEeeeeCCc--CCeEEEEeC--Ce---eeeee--------ccchhhhhhhccCCCCCcccce
Q psy3210         215 KQGCQVIVLSKEGEQ--KGWWKGKID--ER---VSYFF--------QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       215 ~~Gd~i~v~~k~ge~--~gwW~G~~~--g~---~G~fP--------~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      ..|+..+++++.|++  .-.|++...  |+   .-.+.        ..++.|+++|++|+|+|+|++.
T Consensus         5 ~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~   72 (345)
T d1pmea_           5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN   72 (345)
T ss_dssp             CCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCC
T ss_pred             CcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEE
Confidence            344555666666654  346888754  31   11121        2467799999999999999885

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.45  E-value=0.14  Score=43.26  Aligned_cols=22  Identities=18%  Similarity=0.090  Sum_probs=19.1

Q ss_pred             cchhhhhhhccCCCCCccccee
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      .+..|+++|+++.|+|+|+|.-
T Consensus        63 ~~~~Ei~il~~l~hpniv~l~~   84 (346)
T d1cm8a_          63 RAYRELRLLKHMRHENVIGLLD   84 (346)
T ss_dssp             HHHHHHHHHHHCCBTTBCCCSE
T ss_pred             HHHHHHHHHHhcCCCCeeEEEE
Confidence            4667999999999999999863

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.44  E-value=0.1  Score=42.97  Aligned_cols=21  Identities=19%  Similarity=0.113  Sum_probs=19.1

Q ss_pred             cchhhhhhhccCCCCCcccce
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .|.+|+++|++++|||||++.
T Consensus        54 ~~~~E~~il~~l~HpnIv~~~   74 (270)
T d1t4ha_          54 RFKEEAEMLKGLQHPNIVRFY   74 (270)
T ss_dssp             HHHHHHHHHTTCCCTTBCCEE
T ss_pred             HHHHHHHHHHhCCCCCeeeEE
Confidence            477899999999999999985

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.89  E-value=0.097  Score=44.00  Aligned_cols=21  Identities=14%  Similarity=-0.045  Sum_probs=19.4

Q ss_pred             cchhhhhhhccCCCCCcccce
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      .|++|+++|++++|||||+|.
T Consensus        57 ~~~~E~~~l~~l~HpnIv~l~   77 (317)
T d1xkka_          57 EILDEAYVMASVDNPHVCRLL   77 (317)
T ss_dssp             HHHHHHHHHHHCCCTTBCCEE
T ss_pred             HHHHHHHHHHhCCCCCEeeEE
Confidence            588999999999999999985

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.68  E-value=0.12  Score=42.36  Aligned_cols=22  Identities=9%  Similarity=-0.099  Sum_probs=19.8

Q ss_pred             cchhhhhhhccCCCCCccccee
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      .|.+|+++|++++|||||+|.-
T Consensus        54 ~~~~E~~~l~~l~HpnIv~l~~   75 (273)
T d1mp8a_          54 KFLQEALTMRQFDHPHIVKLIG   75 (273)
T ss_dssp             HHHHHHHHHHTCCCTTBCCEEE
T ss_pred             HHHHHHHHHHhCCCCCEeeEEE
Confidence            5889999999999999999863

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.12  E-value=0.13  Score=43.16  Aligned_cols=22  Identities=14%  Similarity=0.014  Sum_probs=19.6

Q ss_pred             cchhhhhhhccCCCCCccccee
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      .+..|+++|++++|||||++.-
T Consensus        61 ~~~~Ei~il~~l~HpnIv~~~~   82 (309)
T d1u5ra_          61 DIIKEVRFLQKLRHPNTIQYRG   82 (309)
T ss_dssp             HHHHHHHHHTTCCCTTBCCEEE
T ss_pred             HHHHHHHHHHHCCCCCEeeEEE
Confidence            4778999999999999999863

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.05  E-value=0.14  Score=42.11  Aligned_cols=22  Identities=27%  Similarity=0.184  Sum_probs=19.7

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      ..+.+|+++|++++|||||++.
T Consensus        48 ~~~~~E~~il~~l~HpnIv~~~   69 (269)
T d2java1          48 QMLVSEVNLLRELKHPNIVRYY   69 (269)
T ss_dssp             HHHHHHHHHTTSCCCTTBCCEE
T ss_pred             HHHHHHHHHHHHCCCCCEeeEE
Confidence            3478899999999999999986

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.86  E-value=0.15  Score=42.85  Aligned_cols=22  Identities=5%  Similarity=-0.037  Sum_probs=19.8

Q ss_pred             ccchhhhhhhccCCCCCcccce
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      ..|.+|+++|++++|||||++-
T Consensus        73 ~~~~~E~~~l~~l~HpnIv~~~   94 (311)
T d1r0pa_          73 SQFLTEGIIMKDFSHPNVLSLL   94 (311)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCCC
T ss_pred             HHHHHHHHHHHhCCCCCEeEEe
Confidence            3588999999999999999984

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.87  E-value=0.11  Score=43.85  Aligned_cols=22  Identities=14%  Similarity=0.098  Sum_probs=19.3

Q ss_pred             cchhhhhhhccC-CCCCccccee
Q psy3210         247 LYWGNFRLLSSL-FIVPPVRLSW  268 (272)
Q Consensus       247 ~yVeE~~~mk~l-~h~~~v~~~~  268 (272)
                      .+++|+++|+++ +|||||+|.-
T Consensus        86 ~~~~E~~~l~~l~~HpnIv~l~~  108 (325)
T d1rjba_          86 ALMSELKMMTQLGSHENIVNLLG  108 (325)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             HHHHHHHHHHHhcCCCcEeEEEE
Confidence            578899999998 8999999863

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.05  E-value=0.31  Score=40.50  Aligned_cols=22  Identities=18%  Similarity=0.170  Sum_probs=19.5

Q ss_pred             cchhhhhhhccC-CCCCccccee
Q psy3210         247 LYWGNFRLLSSL-FIVPPVRLSW  268 (272)
Q Consensus       247 ~yVeE~~~mk~l-~h~~~v~~~~  268 (272)
                      .|..|+++|+++ +|||||++.-
T Consensus        56 ~~~~E~~~l~~l~~HpnIv~~~~   78 (309)
T d1fvra_          56 DFAGELEVLCKLGHHPNIINLLG   78 (309)
T ss_dssp             HHHHHHHHHTTCCCCTTBCCEEE
T ss_pred             HHHHHHHHHHhccCCCCEeeEEE
Confidence            578899999998 7999999863

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=80.92  E-value=0.23  Score=42.49  Aligned_cols=22  Identities=9%  Similarity=0.031  Sum_probs=19.0

Q ss_pred             cchhhhhhhccCCCCCccccee
Q psy3210         247 LYWGNFRLLSSLFIVPPVRLSW  268 (272)
Q Consensus       247 ~yVeE~~~mk~l~h~~~v~~~~  268 (272)
                      .+..|+++|+++.|||||++.-
T Consensus        72 ~~~~Ei~il~~l~HpnIv~~~~   93 (352)
T d1koba_          72 TVKNEISIMNQLHHPKLINLHD   93 (352)
T ss_dssp             HHHHHHHHHTTCCSTTBCCEEE
T ss_pred             HHHHHHHHHHhCCCCCCCcEEE
Confidence            4567999999999999999863

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=80.64  E-value=0.24  Score=40.51  Aligned_cols=23  Identities=17%  Similarity=0.023  Sum_probs=20.5

Q ss_pred             eccchhhhhhhccCCCCCcccce
Q psy3210         245 FQLYWGNFRLLSSLFIVPPVRLS  267 (272)
Q Consensus       245 P~~yVeE~~~mk~l~h~~~v~~~  267 (272)
                      ...+.+|+++|++++|||||++-
T Consensus        44 ~~~~~~E~~il~~l~hpnIv~~~   66 (286)
T d1ob3a_          44 PSTTIREISILKELKHSNIVKLY   66 (286)
T ss_dssp             CHHHHHHHHGGGGCCCTTBCCEE
T ss_pred             HHHHHHHHHHHHhCCCCcEEeee
Confidence            35788999999999999999984

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.07  E-value=0.32  Score=40.32  Aligned_cols=24  Identities=17%  Similarity=-0.051  Sum_probs=20.3

Q ss_pred             ccchhhhhhhccCCCCCcccceec
Q psy3210         246 QLYWGNFRLLSSLFIVPPVRLSWS  269 (272)
Q Consensus       246 ~~yVeE~~~mk~l~h~~~v~~~~~  269 (272)
                      ..++.|+++|++++|+|+|++...
T Consensus        54 ~~~~~E~~il~~l~h~nii~~~~~   77 (318)
T d3blha1          54 ITALREIKILQLLKHENVVNLIEI   77 (318)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             HHHHHHHHHHHHhcCCCccceEee
Confidence            346789999999999999998643