Psyllid ID: psy3260


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
MLHIHLLRFSIDPSPWLLKIMCGSIEIRTVYVGHRQARAVIISRLSCERAGTRFNVRGVNDDGHVANFVETEQVLFLDDEVTSYVQTRGSVPLFWEQPGI
cccHHccccccccccEEEEEEEEEEEEEEEEEccEEEEEEEEEEEcccccccccccccccccccEEEEEEEEEEEEEccEEEEEEEEcccccEEEEcccc
cccHHHHHcccccccEEEEEEEEEEEEEEEEEcccEEEEEEEEEccHHccccEEEEccccccccEEEEEEEEEEEEEcccEEEEEEEcccccEEEccccc
MLHIHLLRfsidpspwllKIMCGSIEIRTVYVGHRQARAVIISRLSceragtrfnvrgvnddghvanfvETEQVLFLDDEVTSYVQtrgsvplfweqpgi
mlhihllrfsidpspWLLKIMCGSIEIRTVYVGHRQARAVIIsrlsceragTRFNVrgvnddghvANFVETEQVLFLDDEVTSYVQTrgsvplfweqpgi
MLHIHLLRFSIDPSPWLLKIMCGSIEIRTVYVGHRQARAVIISRLSCERAGTRFNVRGVNDDGHVANFVETEQVLFLDDEVTSYVQTRGSVPLFWEQPGI
**HIHLLRFSIDPSPWLLKIMCGSIEIRTVYVGHRQARAVIISRLSCERAGTRFNVRGVNDDGHVANFVETEQVLFLDDEVTSYVQTRGSVPLFW*****
MLHIHLLRFSIDPSPWLLKIMCGSIEIRTVYVGHRQARAVIISRLSCERAGTRFNVRGVNDDGHVANFVETEQVLFLDDEVTSYVQTRGSVPLFWEQPGI
MLHIHLLRFSIDPSPWLLKIMCGSIEIRTVYVGHRQARAVIISRLSCERAGTRFNVRGVNDDGHVANFVETEQVLFLDDEVTSYVQTRGSVPLFWEQPGI
MLHIHLLRFSIDPSPWLLKIMCGSIEIRTVYVGHRQARAVIISRLSCERAGTRFNVRGVNDDGHVANFVETEQVLFLDDEVTSYVQTRGSVPLFWEQP**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLHIHLLRFSIDPSPWLLKIMCGSIEIRTVYVGHRQARAVIISRLSCERAGTRFNVRGVNDDGHVANFVETEQVLFLDDEVTSYVQTRGSVPLFWEQPGI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query100 2.2.26 [Sep-21-2011]
O43426 1573 Synaptojanin-1 OS=Homo sa yes N/A 0.99 0.062 0.696 4e-42
Q62910 1574 Synaptojanin-1 OS=Rattus yes N/A 0.99 0.062 0.696 9e-42
Q8CHC4 1574 Synaptojanin-1 OS=Mus mus yes N/A 0.99 0.062 0.696 9e-42
O18964 1324 Synaptojanin-1 (Fragment) yes N/A 0.99 0.074 0.696 8e-41
O15056 1496 Synaptojanin-2 OS=Homo sa no N/A 1.0 0.066 0.63 3e-37
O55207 1496 Synaptojanin-2 OS=Rattus no N/A 1.0 0.066 0.63 7e-37
Q9D2G5 1434 Synaptojanin-2 OS=Mus mus no N/A 1.0 0.069 0.63 8e-37
P50942 1183 Polyphosphatidylinositol yes N/A 0.87 0.073 0.459 1e-17
Q9NTJ5 587 Phosphatidylinositide pho no N/A 0.93 0.158 0.437 5e-16
Q5R921 587 Phosphatidylinositide pho no N/A 0.93 0.158 0.437 5e-16
>sp|O43426|SYNJ1_HUMAN Synaptojanin-1 OS=Homo sapiens GN=SYNJ1 PE=1 SV=2 Back     alignment and function desciption
 Score =  169 bits (429), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/99 (69%), Positives = 86/99 (86%)

Query: 2   LHIHLLRFSIDPSPWLLKIMCGSIEIRTVYVGHRQARAVIISRLSCERAGTRFNVRGVND 61
           LH+HL  + ++   WLL++MCG +EIRT+Y  H+QA+A +ISRLSCERAGTRFNVRG ND
Sbjct: 164 LHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTND 223

Query: 62  DGHVANFVETEQVLFLDDEVTSYVQTRGSVPLFWEQPGI 100
           DGHVANFVETEQV++LDD V+S++Q RGSVPLFWEQPG+
Sbjct: 224 DGHVANFVETEQVVYLDDSVSSFIQIRGSVPLFWEQPGL 262




Inositol 5-phosphatase which has a role in clathrin-mediated endocytosis.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 3EC: 6
>sp|Q62910|SYNJ1_RAT Synaptojanin-1 OS=Rattus norvegicus GN=Synj1 PE=1 SV=3 Back     alignment and function description
>sp|Q8CHC4|SYNJ1_MOUSE Synaptojanin-1 OS=Mus musculus GN=Synj1 PE=1 SV=3 Back     alignment and function description
>sp|O18964|SYNJ1_BOVIN Synaptojanin-1 (Fragment) OS=Bos taurus GN=SYNJ1 PE=1 SV=2 Back     alignment and function description
>sp|O15056|SYNJ2_HUMAN Synaptojanin-2 OS=Homo sapiens GN=SYNJ2 PE=1 SV=3 Back     alignment and function description
>sp|O55207|SYNJ2_RAT Synaptojanin-2 OS=Rattus norvegicus GN=Synj2 PE=1 SV=2 Back     alignment and function description
>sp|Q9D2G5|SYNJ2_MOUSE Synaptojanin-2 OS=Mus musculus GN=Synj2 PE=2 SV=2 Back     alignment and function description
>sp|P50942|INP52_YEAST Polyphosphatidylinositol phosphatase INP52 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=INP52 PE=1 SV=1 Back     alignment and function description
>sp|Q9NTJ5|SAC1_HUMAN Phosphatidylinositide phosphatase SAC1 OS=Homo sapiens GN=SACM1L PE=1 SV=2 Back     alignment and function description
>sp|Q5R921|SAC1_PONAB Phosphatidylinositide phosphatase SAC1 OS=Pongo abelii GN=SACM1L PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query100
66546725 1152 PREDICTED: synaptojanin-1 [Apis mellifer 1.0 0.086 0.88 1e-47
340708941 1149 PREDICTED: synaptojanin-1-like [Bombus t 1.0 0.087 0.87 3e-47
350418995 1149 PREDICTED: synaptojanin-1-like [Bombus i 1.0 0.087 0.87 3e-47
307194526 1172 Synaptojanin-1 [Harpegnathos saltator] 1.0 0.085 0.86 3e-47
383864943 1152 PREDICTED: synaptojanin-1-like [Megachil 1.0 0.086 0.86 5e-47
332023175 1157 Synaptojanin-1 [Acromyrmex echinatior] 1.0 0.086 0.85 6e-47
307182606 1158 Synaptojanin-1 [Camponotus floridanus] 1.0 0.086 0.85 7e-47
322789041 1157 hypothetical protein SINV_10499 [Solenop 1.0 0.086 0.84 3e-46
242018917 1179 synaptojanin-1, putative [Pediculus huma 1.0 0.084 0.81 2e-44
345491863 1113 PREDICTED: synaptojanin-1-like [Nasonia 1.0 0.089 0.79 8e-43
>gi|66546725|ref|XP_395173.2| PREDICTED: synaptojanin-1 [Apis mellifera] Back     alignment and taxonomy information
 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 88/100 (88%), Positives = 95/100 (95%)

Query: 1   MLHIHLLRFSIDPSPWLLKIMCGSIEIRTVYVGHRQARAVIISRLSCERAGTRFNVRGVN 60
           MLHIHLLR+ +D S WLLK MCGS+EIRTVYVGHRQARAV+ISRLSCERAGTRFNVRG N
Sbjct: 165 MLHIHLLRYGVDTSHWLLKAMCGSVEIRTVYVGHRQARAVLISRLSCERAGTRFNVRGTN 224

Query: 61  DDGHVANFVETEQVLFLDDEVTSYVQTRGSVPLFWEQPGI 100
           DDGHVANFVETEQV++LD+EVTSYVQTRGSVPLFWEQPGI
Sbjct: 225 DDGHVANFVETEQVIYLDNEVTSYVQTRGSVPLFWEQPGI 264




Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340708941|ref|XP_003393075.1| PREDICTED: synaptojanin-1-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350418995|ref|XP_003492036.1| PREDICTED: synaptojanin-1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|307194526|gb|EFN76818.1| Synaptojanin-1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383864943|ref|XP_003707937.1| PREDICTED: synaptojanin-1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|332023175|gb|EGI63431.1| Synaptojanin-1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307182606|gb|EFN69777.1| Synaptojanin-1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|322789041|gb|EFZ14499.1| hypothetical protein SINV_10499 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|242018917|ref|XP_002429915.1| synaptojanin-1, putative [Pediculus humanus corporis] gi|212514961|gb|EEB17177.1| synaptojanin-1, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|345491863|ref|XP_001607775.2| PREDICTED: synaptojanin-1-like [Nasonia vitripennis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query100
FB|FBgn0034691 1218 synj "synaptojanin" [Drosophil 1.0 0.082 0.77 1.8e-39
UNIPROTKB|C9JW66 695 SYNJ1 "Synaptojanin-1" [Homo s 0.99 0.142 0.696 3e-37
UNIPROTKB|O18964 1324 SYNJ1 "Synaptojanin-1" [Bos ta 0.99 0.074 0.696 1.3e-36
UNIPROTKB|E1BD68 1210 SYNJ1 "Synaptojanin-1" [Bos ta 0.99 0.081 0.696 1.4e-36
UNIPROTKB|E2RQN0 1265 SYNJ1 "Uncharacterized protein 0.99 0.078 0.696 1.5e-36
UNIPROTKB|F1MC12 1300 SYNJ1 "Synaptojanin-1" [Bos ta 0.99 0.076 0.696 1.6e-36
UNIPROTKB|C9JFZ1 1350 SYNJ1 "Synaptojanin-1" [Homo s 0.99 0.073 0.696 1.7e-36
UNIPROTKB|E1BQ70 1583 SYNJ1 "Uncharacterized protein 0.99 0.062 0.696 1.7e-36
UNIPROTKB|J3KPK1 1526 SYNJ1 "Synaptojanin-1" [Homo s 0.99 0.064 0.696 2e-36
UNIPROTKB|J9JHK8 1563 SYNJ1 "Uncharacterized protein 0.99 0.063 0.696 2.1e-36
FB|FBgn0034691 synj "synaptojanin" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 433 (157.5 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 77/100 (77%), Positives = 91/100 (91%)

Query:     1 MLHIHLLRFSIDPSPWLLKIMCGSIEIRTVYVGHRQARAVIISRLSCERAGTRFNVRGVN 60
             M+HIHL+RF ID   WLL+ MCGS+E+RTVY+G +QARA IISRLSCERAGTRFNVRG N
Sbjct:   172 MMHIHLMRFGIDCQSWLLQAMCGSVEVRTVYIGAKQARAAIISRLSCERAGTRFNVRGTN 231

Query:    61 DDGHVANFVETEQVLFLDDEVTSYVQTRGSVPLFWEQPGI 100
             D+G+VANFVETEQV+++D +VTSYVQTRGSVPLFWEQPG+
Sbjct:   232 DEGYVANFVETEQVIYVDGDVTSYVQTRGSVPLFWEQPGV 271




GO:0048488 "synaptic vesicle endocytosis" evidence=IMP;TAS
GO:0007269 "neurotransmitter secretion" evidence=NAS
GO:0004445 "inositol-polyphosphate 5-phosphatase activity" evidence=IDA
GO:0016311 "dephosphorylation" evidence=NAS
GO:0046030 "inositol trisphosphate phosphatase activity" evidence=NAS
GO:0043195 "terminal bouton" evidence=IDA
GO:0012506 "vesicle membrane" evidence=IDA
GO:0046854 "phosphatidylinositol phosphorylation" evidence=IEA
GO:0000166 "nucleotide binding" evidence=IEA
GO:0048790 "maintenance of presynaptic active zone structure" evidence=IMP
GO:0050803 "regulation of synapse structure and activity" evidence=IMP
UNIPROTKB|C9JW66 SYNJ1 "Synaptojanin-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O18964 SYNJ1 "Synaptojanin-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E1BD68 SYNJ1 "Synaptojanin-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RQN0 SYNJ1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1MC12 SYNJ1 "Synaptojanin-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|C9JFZ1 SYNJ1 "Synaptojanin-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BQ70 SYNJ1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|J3KPK1 SYNJ1 "Synaptojanin-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|J9JHK8 SYNJ1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O43426SYNJ1_HUMAN3, ., 1, ., 3, ., 3, 60.69690.990.0629yesN/A
Q62910SYNJ1_RAT3, ., 1, ., 3, ., 3, 60.69690.990.0628yesN/A
Q8CHC4SYNJ1_MOUSE3, ., 1, ., 3, ., 3, 60.69690.990.0628yesN/A
O43001SYJ1_SCHPO3, ., 1, ., 3, ., 3, 60.62740.510.0473yesN/A
O18964SYNJ1_BOVIN3, ., 1, ., 3, ., 3, 60.69690.990.0747yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query100
pfam02383298 pfam02383, Syja_N, SacI homology domain 8e-48
COG5329 570 COG5329, COG5329, Phosphoinositide polyphosphatase 2e-29
>gnl|CDD|217007 pfam02383, Syja_N, SacI homology domain Back     alignment and domain information
 Score =  153 bits (389), Expect = 8e-48
 Identities = 51/100 (51%), Positives = 68/100 (68%), Gaps = 3/100 (3%)

Query: 2   LHIHLLRFSIDPSPWLLKIMCGSIEIRTVYVGH--RQARAVIISRLSCERAGTRFNVRGV 59
           L   L+ F  D S WLL ++ G +E RT+ V    ++    +ISR S +RAGTR+N RG+
Sbjct: 113 LLKPLIDFRSDLSDWLLPLIQGFVEQRTISVNGEGKKVTLTLISRRSRKRAGTRYNRRGI 172

Query: 60  NDDGHVANFVETEQVLFLDDE-VTSYVQTRGSVPLFWEQP 98
           +DDG+VANFVETEQ++  D   + S+VQ RGSVPLFWEQ 
Sbjct: 173 DDDGNVANFVETEQIVSDDSGRIFSFVQIRGSVPLFWEQD 212


This Pfam family represents a protein domain which shows homology to the yeast protein SacI. The SacI homology domain is most notably found at the amino terminal of the inositol 5'-phosphatase synaptojanin. Length = 298

>gnl|CDD|227637 COG5329, COG5329, Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 100
PF02383319 Syja_N: SacI homology domain; InterPro: IPR002013 100.0
KOG0566|consensus 1080 100.0
COG5329 570 Phosphoinositide polyphosphatase (Sac family) [Sig 100.0
KOG1888|consensus 868 99.97
KOG1889|consensus 579 99.97
KOG1890|consensus 949 99.97
>PF02383 Syja_N: SacI homology domain; InterPro: IPR002013 Synaptic vesicles are recycled with remarkable speed and precision in nerve terminals Back     alignment and domain information
Probab=100.00  E-value=5.3e-41  Score=259.12  Aligned_cols=96  Identities=48%  Similarity=0.857  Sum_probs=69.5

Q ss_pred             cccceeeeccCCCCeEEEEEEeEEEEEEEEEC-CeeeEEEEEEeeeccccCccceeccCCCCCceeeeEEEEEEEe-e-C
Q psy3260           2 LHIHLLRFSIDPSPWLLKIMCGSIEIRTVYVG-HRQARAVIISRLSCERAGTRFNVRGVNDDGHVANFVETEQVLF-L-D   78 (100)
Q Consensus         2 ~~~~l~~~~~~~~~~~~~ii~G~~~~~~~~~~-~~~~~~~LISRrS~~~~GtRy~~RGid~~G~vaNfvEtE~iv~-~-~   78 (100)
                      +..||...+.+.+.||+|+|||||++..+.+. +..++++||||||+.+|||||++||||++|+||||||||||++ . +
T Consensus       128 l~~~~~~~~~~~~~~~~~iiqG~v~~~~~~~~~~~~~~~~lIsRrS~~r~GtRy~~RGid~~G~vANfVEtEqiv~~~~~  207 (319)
T PF02383_consen  128 LLKPFIEFGPDLDRWCLPIIQGFVESRQIEINSGKNFQLTLISRRSCRRAGTRYNRRGIDDDGNVANFVETEQIVYIYNN  207 (319)
T ss_dssp             GGHHHHHHHGGGGGG----BSSEEEEEEEEET-TEEEEEEEEEEE-----SSS--SSSB-TTS--S-EEEEEEEEEEE-T
T ss_pred             HHHHHHhhCCCcccEEEEEEeeeEEEEEeeeecCceEEEEEEEeEeccccccccccccccccCccceeEEEEEEEEEcCC
Confidence            45677777766779999999999999999998 9999999999999999999999999999999999999999999 5 5


Q ss_pred             --CcEEEEEEeccCceeeEEe
Q psy3260          79 --DEVTSYVQTRGSVPLFWEQ   97 (100)
Q Consensus        79 --~~~~SfvqiRGSVPlfW~q   97 (100)
                        +.++||||+||||||||+|
T Consensus       208 ~~~~~~SfvqiRGSVPl~W~Q  228 (319)
T PF02383_consen  208 QSGHIFSFVQIRGSVPLFWSQ  228 (319)
T ss_dssp             --EEEEEEEEEEE---SBS--
T ss_pred             CCccEEEEeEecCCCCceeEc
Confidence              7899999999999999999



A major recycling pathway involves clathrin-mediated endocytosis at endocytic zones located around sites of release. Different 'accessory' proteins linked to this pathway have been shown to alter the shape and composition of lipid membranes, to modify membrane-coat protein interactions, and to influence actin polymerisation. These include the GTPase dynamin, the lysophosphatidic acid acyl transferase endophilin, and the phosphoinositide phosphatase synaptojanin []. The recessive suppressor of secretory defect in yeast Golgi and yeast actin function belongs to this family. This protein may be involved in the coordination of the activities of the secretory pathway and the actin cytoskeleton. Human synaptojanin which may be localised on coated endocytic intermediates in nerve terminals also belongs to this family.; GO: 0042578 phosphoric ester hydrolase activity; PDB: 3LWT_X.

>KOG0566|consensus Back     alignment and domain information
>COG5329 Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms] Back     alignment and domain information
>KOG1888|consensus Back     alignment and domain information
>KOG1889|consensus Back     alignment and domain information
>KOG1890|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query100
3lwt_X 505 Crystal Structure Of The Yeast Sac1: Implications F 7e-12
>pdb|3LWT|X Chain X, Crystal Structure Of The Yeast Sac1: Implications For Its Phosphoinositide Phosphatase Function Length = 505 Back     alignment and structure

Iteration: 1

Score = 65.5 bits (158), Expect = 7e-12, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 6/63 (9%) Query: 41 IISRLSCERAGTRFNVRGVNDDGHVANFVETEQVLFLDD------EVTSYVQTRGSVPLF 94 +I+R S RAGTR+ RGV+ DG+V NF ETEQ+L ++ V S++QTRGSVP++ Sbjct: 204 LITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAENPESEKIHVFSFLQTRGSVPIY 263 Query: 95 WEQ 97 W + Sbjct: 264 WAE 266

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query100
3lwt_X 505 Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipi 1e-27
>3lwt_X Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipid metabol endoplasmic reticulum, hydrolase, membrane, transmembrane; 1.96A {Saccharomyces cerevisiae} Length = 505 Back     alignment and structure
 Score =  103 bits (257), Expect = 1e-27
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 4   IHLLRFSIDPSPWLLKIMCGSIEIRTVYVGHRQARAVIISRLSCERAGTRFNVRGVNDDG 63
            +          ++  ++ G  +     +        +I+R S  RAGTR+  RGV+ DG
Sbjct: 167 RNFAHQDPRIDSFIQPVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDG 226

Query: 64  HVANFVETEQVLFLDDE------VTSYVQTRGSVPLFWEQPG 99
           +V NF ETEQ+L  ++       V S++QTRGSVP++W +  
Sbjct: 227 NVGNFNETEQILLAENPESEKIHVFSFLQTRGSVPIYWAEIN 268


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query100
3lwt_X 505 Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipi 100.0
>3lwt_X Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipid metabol endoplasmic reticulum, hydrolase, membrane, transmembrane; 1.96A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=9.3e-40  Score=266.46  Aligned_cols=97  Identities=36%  Similarity=0.585  Sum_probs=88.9

Q ss_pred             cccceeeecc---CCCCeEEEEEEeEEEEEEEEECCeeeEEEEEEeeeccccCccceeccCCCCCceeeeEEEEEEEeeC
Q psy3260           2 LHIHLLRFSI---DPSPWLLKIMCGSIEIRTVYVGHRQARAVIISRLSCERAGTRFNVRGVNDDGHVANFVETEQVLFLD   78 (100)
Q Consensus         2 ~~~~l~~~~~---~~~~~~~~ii~G~~~~~~~~~~~~~~~~~LISRrS~~~~GtRy~~RGid~~G~vaNfvEtE~iv~~~   78 (100)
                      +..||++.+.   +.+.||+|+||||+++..+.+.++++.++||||||++||||||++||+|++|+||||||||||++.+
T Consensus       162 l~~~l~~~~~~~~~~~~~~~piI~Gfv~~~~~~~~~~~~~~tLISRRS~~raGtRy~~RGidd~G~VANfVETEqIv~~~  241 (505)
T 3lwt_X          162 LTEDLRNFAHQDPRIDSFIQPVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAE  241 (505)
T ss_dssp             GGHHHHHHHTTCGGGGGGCCCCBSSEEEEEEEEETTEEEEEEEEEEECCCCCSSSCCSSSBCTTSCCSCEEEEEEEEEEE
T ss_pred             HHHHHHHhcccCcchhhhhhHhhcCceEEEEEEECCceEEEEEEEEEecccCCccccccCcCCCCCccceeeEEEEEEeC
Confidence            4566766554   2458999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             C------cEEEEEEeccCceeeEEeC
Q psy3260          79 D------EVTSYVQTRGSVPLFWEQP   98 (100)
Q Consensus        79 ~------~~~SfvqiRGSVPlfW~q~   98 (100)
                      +      .++||||+||||||||+|.
T Consensus       242 ~~~~~~~~~~SfvQiRGSVPlfW~Q~  267 (505)
T 3lwt_X          242 NPESEKIHVFSFLQTRGSVPIYWAEI  267 (505)
T ss_dssp             CTTTCCEEEEEEEEEEECCCSBSCCC
T ss_pred             CCCCCCccEEEEEEeccccCceeeec
Confidence            7      8999999999999999995




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00