Psyllid ID: psy3308

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------84
Protein Sequence
MQQGHDRVVAVLLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCATILVKNGAEIDPVTKLSDEHEKSIDLPNR
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccccccccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHHccHHHHHHHHHcccccccccccccHHHHHHHHccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHcHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHccccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHcccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHccccHHHHHHcccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHccccHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
MQQGHDRVVAVLLEndtkgkvklpalhIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDngatinvqslngftplymAAQENHDGVVRYLLskggnqtlatehnitplhVACKWGKVAMVELLISkganieaktrdgltplhcaarsghdNVIDILIEKGAALYSktknglaplhmasqgdhEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLldrkadpnaralngftplhiackknryksshcnHVWVAKTLLdrkadpnaralngftplhiacKKNRYKVVELLLKYGASIAattesgltplhvaSFMGCMNIAIFLLqagaapdtatvrgetplhlaaRANQTDIVRILLRNgasvdararedqtplhVASRLRRFSSASQSALtrvrgetplhlaaRANQTDIVRILLRNgasvdararedqtplhvasrlgngDIASLLLQhgasvdaptkdgyTALHISAKEGQDEVASILTESGasitattkkgftplhLAAKYGRMKIAQMLLqkdapvdsqgKVASILTESgasitattkkgftplhLAAKYGRMKIAQMLLqkdapvdsqgkngvtplhvaSHYDHQNVALLLLdrgasphavakngytplhiAAKKNQMDIATTLLEynakpnaeskagftplhlsaqeghtDMSSLLIEHgatvshqakngltplhlcaqeDKVNVATITmfngaeidpvtkagftplhiashFGQLNMVRYLVENganvnattnlgytplhqasqQGRVLIIDLLlgagaqpnattnLFCCATILvkngaeidpvtklsdeheksidlpnr
Flexible Loop (DISEMBL)
MQQGHDRVVAVLlendtkgkvklPALHIAAKKDDCKAAALLLEVSfsntklevslsntklevslsntkfEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALngftplhiackKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNgasvdararedqtplhvasrlrrfssasqsaltrvrgetplhlaaranqtDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGAsitattkkgftpLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTesgasitattkkgftpLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCATILVKNGAeidpvtklsdeheksidlpnr
Low Complexity Region (SEG)
MQQGHDRVVAVLLENDTKGKVKLPALHIaakkddckaaalllEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCATILVKNGAEIDPVTKLSDEHEKSIDLPNR
Disordered region (IsUnstruct)
*******VVAVLLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGA**************************************LHLAARANQTDIVRILLRNGASV***********HVASRLGNGDIASLLLQHGASVDAPTKDGYTALHIS********ASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD********VASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK*********NGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN***************************LLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCATILVKNGAEID******************
Disordered Region (DISOPRED)
MQQGHDRVVAVLLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCATILVKNGAEIDPVTKLSDEHE********
Disordered Region (DISEMBL)
MQQGHDRVVAVLLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCATILVKNGAEIDPVTKLSDEHEKSIDLPNR
Disordered Region (DISPRO)
*QQGHDRVVAVLLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCATILVKNGAEIDPVTKLSDEH*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQQGHDRVVAVLLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCATILVKNGAEIDPVTKLSDEHEKSIDLPNR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	838	2.2.26 [Sep-21-2011]
Q01484	3957	Ankyrin-2 OS=Homo sapiens	no	N/A	0.840	0.177	0.452	1e-163
Q8C8R3	3898	Ankyrin-2 OS=Mus musculus	yes	N/A	0.840	0.180	0.451	1e-162
Q12955	4377	Ankyrin-3 OS=Homo sapiens	no	N/A	0.857	0.164	0.429	1e-161
G5E8K5	1961	Ankyrin-3 OS=Mus musculus	no	N/A	0.854	0.365	0.428	1e-159
P16157	1881	Ankyrin-1 OS=Homo sapiens	no	N/A	0.842	0.375	0.413	1e-147
Q02357	1862	Ankyrin-1 OS=Mus musculus	no	N/A	0.842	0.379	0.412	1e-143
Q3UES3	1166	Tankyrase-2 OS=Mus muscul	no	N/A	0.791	0.568	0.305	4e-77
O95271	1327	Tankyrase-1 OS=Homo sapie	no	N/A	0.782	0.494	0.309	2e-76
Q9H2K2	1166	Tankyrase-2 OS=Homo sapie	no	N/A	0.784	0.563	0.302	3e-76
Q6PFX9	1320	Tankyrase-1 OS=Mus muscul	no	N/A	0.782	0.496	0.309	3e-76

>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4

 Score =  577 bits (1488), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 341/753 (45%), Positives = 472/753 (62%), Gaps = 49/753 (6%)

Query: 85  GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMV 144
           G  IN  + NG   L++AA+E H G+V+ LL +G +   AT+   T LH+A   G+  +V
Sbjct: 54  GIDINTCNQNGLNALHLAAKEGHVGLVQELLGRGSSVDSATKKGNTALHIASLAGQAEVV 113

Query: 145 ELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQG 204
           ++L+ +GANI A++++G TPL+ AA+  H +V+  L+E GA   + T++G  PL +A Q 
Sbjct: 114 KVLVKEGANINAQSQNGFTPLYMAAQENHIDVVKYLLENGANQSTATEDGFTPLAVALQQ 173

Query: 205 DHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLL--DRKADPNARAL---- 258
            H  A  +L+ +    D      L ALH+A+     + A  LL  D  AD  ++ +    
Sbjct: 174 GHNQAVAILLEN----DTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRT 229

Query: 259 --NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKV 316
             +GFTPLHIA        +H  +V VA  LL+R A  +  A NG TPLH+A K+    +
Sbjct: 230 TESGFTPLHIA--------AHYGNVNVATLLLNRGAAVDFTARNGITPLHVASKRGNTNM 281

Query: 317 VELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAAR 376
           V+LLL  G  I A T  GLTPLH A+  G   +   LL+ GA     T  G +PLH+AA+
Sbjct: 282 VKLLLDRGGQIDAKTRDGLTPLHCAARSGHDQVVELLLERGAPLLARTKNGLSPLHMAAQ 341

Query: 377 ANQTDIVRILLRNGASVDARAREDQTPLHVASR----------LRRFSSASQSALTRVRG 426
            +  + V+ LL++ A VD    +  T LHVA+           L + ++ +  AL    G
Sbjct: 342 GDHVECVKHLLQHKAPVDDVTLDYLTALHVAAHCGHYRVTKLLLDKRANPNARALN---G 398

Query: 427 ETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVD 486
            TPLH+A + N+  ++ +L++ GAS+ A      TP+HVA+ +G+ +I  LLLQ+GAS D
Sbjct: 399 FTPLHIACKKNRIKVMELLVKYGASIQAITESGLTPIHVAAFMGHLNIVLLLLQNGASPD 458

Query: 487 APTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
                G TALH++A+ GQ EV   L  +GA + A  ++  TPLH+A++ G+ +I Q+LLQ
Sbjct: 459 VTNIRGETALHMAARAGQVEVVRCLLRNGALVDARAREEQTPLHIASRLGKTEIVQLLLQ 518

Query: 547 KDAPVDS----------------QGKVASILTESGASITATTKKGFTPLHLAAKYGRMKI 590
             A  D+                Q  VAS+L E+GA+ +  TKKGFTPLH+AAKYG + +
Sbjct: 519 HMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDV 578

Query: 591 AQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAK 650
           A++LLQ+ A  DS GKNG+TPLHVA+HYD+Q VALLLL++GASPHA AKNGYTPLHIAAK
Sbjct: 579 AKLLLQRRAAADSAGKNGLTPLHVAAHYDNQKVALLLLEKGASPHATAKNGYTPLHIAAK 638

Query: 651 KNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTP 710
           KNQM IA+TLL Y A+ N  +K G TPLHL++QEGHTDM +LL++ GA +    K+GLT 
Sbjct: 639 KNQMQIASTLLNYGAETNIVTKQGVTPLHLASQEGHTDMVTLLLDKGANIHMSTKSGLTS 698

Query: 711 LHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATT 770
           LHL AQEDKVNVA I   +GA+ D  TK G+TPL +A H+G + MV +L++ GANVNA T
Sbjct: 699 LHLAAQEDKVNVADILTKHGADQDAHTKLGYTPLIVACHYGNVKMVNFLLKQGANVNAKT 758

Query: 771 NLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
             GYTPLHQA+QQG   II++LL  GA+PNATT
Sbjct: 759 KNGYTPLHQAAQQGHTHIINVLLQHGAKPNATT 791

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes. Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.
Homo sapiens (taxid: 9606)

>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2

 Score =  574 bits (1479), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 340/753 (45%), Positives = 470/753 (62%), Gaps = 49/753 (6%)

Query: 85  GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMV 144
           G  IN  + NG   L++AA+E H G+V+ LL +G +   AT+   T LH+A   G+  +V
Sbjct: 54  GIDINTCNQNGLNALHLAAKEGHVGLVQELLGRGSSVDSATKKGNTALHIASLAGQAEVV 113

Query: 145 ELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQG 204
           ++L+ +GANI A++++G TPL+ AA+  H +V+  L+E GA   + T++G  PL +A Q 
Sbjct: 114 KVLVKEGANINAQSQNGFTPLYMAAQENHIDVVKYLLENGANQSTATEDGFTPLAVALQQ 173

Query: 205 DHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLL--DRKADPNARAL---- 258
            H  A  +L+ +    D      L ALH+A+     + A  LL  D  AD  ++ +    
Sbjct: 174 GHNQAVAILLEN----DTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRT 229

Query: 259 --NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKV 316
             +GFTPLHIA        +H  +V VA  LL+R A  +  A NG TPLH+A K+    +
Sbjct: 230 TESGFTPLHIA--------AHYGNVNVATLLLNRGAAVDFTARNGITPLHVASKRGNTNM 281

Query: 317 VELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAAR 376
           V+LLL  G  I A T  GLTPLH A+  G   +   LL+  A     T  G +PLH+AA+
Sbjct: 282 VKLLLDRGGQIDAKTRDGLTPLHCAARSGHDQVVELLLERKAPLLARTKNGLSPLHMAAQ 341

Query: 377 ANQTDIVRILLRNGASVDARAREDQTPLHVASR----------LRRFSSASQSALTRVRG 426
            +  + V+ LL+  A VD    +  T LHVA+           L + ++ +  AL    G
Sbjct: 342 GDHVECVKHLLQYKAPVDDVTLDYLTALHVAAHCGHYRVTKLLLDKRANPNARALN---G 398

Query: 427 ETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVD 486
            TPLH+A + N+  ++ +L++ GAS+ A      TP+HVA+ +G+ +I  LLLQ+GAS D
Sbjct: 399 FTPLHIACKKNRIKVMELLVKYGASIQAITESGLTPIHVAAFMGHLNIVLLLLQNGASPD 458

Query: 487 APTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
                G TALH++A+ GQ EV   L  +GA + A  ++  TPLH+A++ G+ +I Q+LLQ
Sbjct: 459 VTNIRGETALHMAARAGQVEVVRCLLRNGALVDARAREEQTPLHIASRLGKTEIVQLLLQ 518

Query: 547 KDAPVDS----------------QGKVASILTESGASITATTKKGFTPLHLAAKYGRMKI 590
             A  D+                Q  VAS+L E+GA+ +  TKKGFTPLH+AAKYG + +
Sbjct: 519 HMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDV 578

Query: 591 AQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAK 650
           A++LLQ+ A  DS GKNG+TPLHVA+HYD+Q VALLLL++GASPHA AKNGYTPLHIAAK
Sbjct: 579 AKLLLQRRAAADSAGKNGLTPLHVAAHYDNQKVALLLLEKGASPHATAKNGYTPLHIAAK 638

Query: 651 KNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTP 710
           KNQM IA+TLL Y A+ N  +K G TPLHL++QEGHTDM +LL++ GA +    K+GLT 
Sbjct: 639 KNQMQIASTLLNYGAETNTVTKQGVTPLHLASQEGHTDMVTLLLDKGANIHMSTKSGLTS 698

Query: 711 LHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATT 770
           LHL AQEDKVNVA I   +GA+ D  TK G+TPL +A H+G + MV +L++ GANVNA T
Sbjct: 699 LHLAAQEDKVNVADILTKHGADRDAYTKLGYTPLIVACHYGNVKMVNFLLKQGANVNAKT 758

Query: 771 NLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
             GYTPLHQA+QQG   II++LL  GA+PNATT
Sbjct: 759 KNGYTPLHQAAQQGHTHIINVLLQHGAKPNATT 791

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes (By similarity). Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Mus musculus (taxid: 10090)

>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3

 Score =  568 bits (1463), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 324/754 (42%), Positives = 458/754 (60%), Gaps = 35/754 (4%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G  E A   + NG  IN+ + NG   L++A++E H  VV  LL +  N   AT+   T L
Sbjct: 52  GHLEKALDYIKNGVDINICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTAL 111

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H+A   G+  +V++L++ GAN+ A++++G TPL+ AA+  H  V+  L++ GA+    T+
Sbjct: 112 HIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATE 171

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
           +G  PL +A Q  H+    +L+ +    D      L ALH+A+     + A  LL    +
Sbjct: 172 DGFTPLAVALQQGHDQVVSLLLEN----DTKGKVRLPALHIAARKDDTKAAALLLQNDNN 227

Query: 253 PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN 312
            +  + +GFTPLHIA        +H  ++ VA  LL+R A  +  A N  TPLH+A K+ 
Sbjct: 228 ADVESKSGFTPLHIA--------AHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRG 279

Query: 313 RYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLH 372
              +V+LLL  GA I A T  GLTPLH  +  G   +   LL   A   + T  G +PLH
Sbjct: 280 NANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGLSPLH 339

Query: 373 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSA-------SQSALTRVR 425
           +A + +  + V++LL++   VD    +  T LHVA+    +  A       +      + 
Sbjct: 340 MATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKALN 399

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
           G TPLH+A + N+  ++ +LL++GAS+ A      TP+HVA+ +G+ +I S L+ HGAS 
Sbjct: 400 GFTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASP 459

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           +     G TALH++A+ GQ EV   L + GA + A  K   TPLH++A+ G+  I Q LL
Sbjct: 460 NTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLL 519

Query: 546 QKDA-----------PV-----DSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMK 589
           Q+ A           P+     +    VA+ L + GAS++ TTKKGFTPLH+AAKYG+++
Sbjct: 520 QQGASPNAATTSGYTPLHLSAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLE 579

Query: 590 IAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAA 649
           +A +LLQK A  D+ GK+G+TPLHVA+HYD+Q VALLLLD+GASPHA AKNGYTPLHIAA
Sbjct: 580 VANLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAA 639

Query: 650 KKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLT 709
           KKNQMDIATTLLEY A  NA ++ G   +HL+AQEGH DM SLL+   A V+   K+GLT
Sbjct: 640 KKNQMDIATTLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLGRNANVNLSNKSGLT 699

Query: 710 PLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNAT 769
           PLHL AQED+VNVA + +  GA +D  TK G+TPLH+  H+G + +V +L+++ A VNA 
Sbjct: 700 PLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAK 759

Query: 770 TNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
           T  GYTPLHQA+QQG   II++LL   A PN  T
Sbjct: 760 TKNGYTPLHQAAQQGHTHIINVLLQNNASPNELT 793

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments.

Homo sapiens (taxid: 9606)

>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1

 Score =  564 bits (1453), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 324/757 (42%), Positives = 460/757 (60%), Gaps = 41/757 (5%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G  E A   + NG  +N+ + NG   L++A++E H  VV  LL +  N   AT+   T L
Sbjct: 35  GHLEKALDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTAL 94

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H+A   G+  +V++L++ GAN+ A++++G TPL+ AA+  H  V+  L++ GA+    T+
Sbjct: 95  HIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFLLDNGASQSLATE 154

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
           +G  PL +A Q  H+    +L+ +    D      L ALH+A+     + A  LL    +
Sbjct: 155 DGFTPLAVALQQGHDQVVSLLLEN----DTKGKVRLPALHIAARKDDTKAAALLLQNDTN 210

Query: 253 PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN 312
            +  + +GFTPLHIA        +H  ++ VA  LL+R A  +  A N  TPLH+A K+ 
Sbjct: 211 ADVESKSGFTPLHIA--------AHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRG 262

Query: 313 RYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLH 372
              +V+LLL  GA I A T  GLTPLH  +  G   +   LL   A   + T  G +PLH
Sbjct: 263 NANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRSAPILSKTKNGLSPLH 322

Query: 373 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASR----------LRRFSSASQSALT 422
           +A + +  + V++LL++   VD    +  T LHVA+           L + +S +  AL 
Sbjct: 323 MATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKASPNAKALN 382

Query: 423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
              G TPLH+A + N+  ++ +LL++GAS+ A      TP+HVA+ +G+ +I S L+ HG
Sbjct: 383 ---GFTPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHG 439

Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQ 542
           AS +     G TALH++A+ GQ EV   L + GA + A  K   TPLH++A+ G+  I Q
Sbjct: 440 ASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQ 499

Query: 543 MLLQKDA-----------PV-----DSQGKVASILTESGASITATTKKGFTPLHLAAKYG 586
            LLQ+ A           P+     +    VA+ L + GAS++ TTKKGFTPLH+AAKYG
Sbjct: 500 QLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYG 559

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLH 646
           ++++A +LLQK A  D+ GK+G+TPLHVA+HYD+Q VALLLLD+GASPHA AKNGYTPLH
Sbjct: 560 KLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLH 619

Query: 647 IAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN 706
           IAAKKNQMDIAT+LLEY A  NA ++ G   +HL+AQEGH DM SLL+   A V+   K+
Sbjct: 620 IAAKKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSRNANVNLSNKS 679

Query: 707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
           GLTPLHL AQED+VNVA + +  GA +D  TK G+TPLH+  H+G + +V +L+++ A V
Sbjct: 680 GLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKV 739

Query: 767 NATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
           NA T  GYT LHQA+QQG   II++LL   A PN  T
Sbjct: 740 NAKTKNGYTALHQAAQQGHTHIINVLLQNNASPNELT 776

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments (By similarity). In skeletal muscle, required for costamere localization of DMD and betaDAG1.

Mus musculus (taxid: 10090)

>sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3

 Score =  523 bits (1346), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 309/747 (41%), Positives = 440/747 (58%), Gaps = 41/747 (5%)

Query: 84  NGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAM 143
           NG  IN  + NG   L++A++E H  +V  LL K       T+   T LH+A   G+  +
Sbjct: 34  NGVDINTCNQNGLNGLHLASKEGHVKMVVELLHKEIILETTTKKGNTALHIAALAGQDEV 93

Query: 144 VELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQ 203
           V  L++ GAN+ A+++ G TPL+ AA+  H  V+  L+E GA     T++G  PL +A Q
Sbjct: 94  VRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQ 153

Query: 204 GDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTP 263
             HE     LI +G          L ALH+A+     R A  LL    +P+  +  GFTP
Sbjct: 154 QGHENVVAHLINYGTKGKV----RLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTP 209

Query: 264 LHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKY 323
           LHIA        +H  ++ VA+ LL+R A  N    NG TPLHIA ++    +V LLL  
Sbjct: 210 LHIA--------AHYENLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDR 261

Query: 324 GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIV 383
           GA I   T+  LTPLH A+  G + I+  LL  GA     T  G +P+H+AA+ +  D V
Sbjct: 262 GAQIETKTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCV 321

Query: 384 RILLRNGASVDARAREDQTPLHVASR----------LRRFSSASQSALTRVRGETPLHLA 433
           R+LL+  A +D    +  TPLHVA+           L + +  +  AL    G TPLH+A
Sbjct: 322 RLLLQYDAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPNSRALN---GFTPLHIA 378

Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
            + N   ++ +LL+ GAS+DA      TPLHVAS +G+  I   LLQ GAS +       
Sbjct: 379 CKKNHVRVMELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVE 438

Query: 494 TALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD- 552
           T LH++A+ G  EVA  L ++ A + A  K   TPLH AA+ G   + ++LL+ +A  + 
Sbjct: 439 TPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNL 498

Query: 553 -------------SQGKVASILT--ESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 597
                         +G V ++L   E  AS    TKKGFTPLH+AAKYG++++A++LL++
Sbjct: 499 ATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER 558

Query: 598 DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIA 657
           DA  ++ GKNG+TPLHVA H+++ ++  LLL RG SPH+ A NGYTPLHIAAK+NQ+++A
Sbjct: 559 DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVA 618

Query: 658 TTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQE 717
            +LL+Y    NAES  G TPLHL+AQEGH +M +LL+   A  +   K+GLTPLHL AQE
Sbjct: 619 RSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQE 678

Query: 718 DKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPL 777
             V VA + + +G  +D  T+ G+TPLH+ASH+G + +V++L+++ A+VNA T LGY+PL
Sbjct: 679 GHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPL 738

Query: 778 HQASQQGRVLIIDLLLGAGAQPNATTN 804
           HQA+QQG   I+ LLL  GA PN  ++
Sbjct: 739 HQAAQQGHTDIVTLLLKNGASPNEVSS 765

Isoform Mu17 together with obscurin in skeletal muscle may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Homo sapiens (taxid: 9606)

>sp|Q02357|ANK1_MOUSE Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2

 Score =  511 bits (1316), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 308/747 (41%), Positives = 437/747 (58%), Gaps = 41/747 (5%)

Query: 84  NGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAM 143
           NG  IN  + NG   L++A++E H  +V  LL K       T+   T LH+A   G+  +
Sbjct: 30  NGVDINTCNQNGLNGLHLASKEGHVKMVVELLHKEIILETTTKKGNTALHIAALAGQDEV 89

Query: 144 VELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQ 203
           V  L++ GAN+ A+++ G TPL+ AA+  H  V+  L+E GA     T++G  PL +A Q
Sbjct: 90  VRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQ 149

Query: 204 GDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTP 263
             HE     LI +G          L ALH+A+     R A  LL    +P+  +  GFTP
Sbjct: 150 QGHENVVAHLINYGTKGKV----RLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTP 205

Query: 264 LHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKY 323
           LHIA        +H  ++ VA+ LL+R A  N    NG TPLHIA ++    +V LLL  
Sbjct: 206 LHIA--------AHYENLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDR 257

Query: 324 GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIV 383
           GA I   T+  LTPLH A+  G + I+  LL  GA     T  G +P+H+AA+ +  D V
Sbjct: 258 GAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCV 317

Query: 384 RILLRNGASVDARAREDQTPLHVASR----------LRRFSSASQSALTRVRGETPLHLA 433
           R+LL+  A +D    +  TPLHVA+           L + +  +  AL    G TPLH+A
Sbjct: 318 RLLLQYNAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPNSRALN---GFTPLHIA 374

Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
            + N   ++ +LL+ GAS+DA      TPLHVAS +G+  I   LLQ GAS +       
Sbjct: 375 CKKNHIRVMELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVE 434

Query: 494 TALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA---- 549
           T LH++A+ G  EVA  L ++ A   A  K   TPLH AA+ G   + ++LL+  A    
Sbjct: 435 TPLHMAARAGHTEVAKYLLQNKAKANAKAKDDQTPLHCAARIGHTGMVKLLLENGASPNL 494

Query: 550 -------PVDSQGKVASI-----LTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 597
                  P+ +  +   +     L E  AS    TKKGFTPLH+AAKYG++++A++LL+ 
Sbjct: 495 ATTAGHTPLHTAAREGHVDTALALLEKEASQACMTKKGFTPLHVAAKYGKVRLAELLLEH 554

Query: 598 DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIA 657
           DA  ++ GKNG+TPLHVA H+++ ++  LLL RG SPH+ A NGYTPLHIAAK+NQ+++A
Sbjct: 555 DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQIEVA 614

Query: 658 TTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQE 717
            +LL+Y    NAES  G TPLHL+AQEGHT+M +LL+   A  +   K+GLTPLHL +QE
Sbjct: 615 RSLLQYGGSANAESVQGVTPLHLAAQEGHTEMVALLLSKQANGNLGNKSGLTPLHLVSQE 674

Query: 718 DKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPL 777
             V VA + + +G  +D  T+ G+TPLH+ASH+G + +V++L+++ A+VNA T LGY+PL
Sbjct: 675 GHVPVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPL 734

Query: 778 HQASQQGRVLIIDLLLGAGAQPNATTN 804
           HQA+QQG   I+ LLL  GA PN  ++
Sbjct: 735 HQAAQQGHTDIVTLLLKNGASPNEVSS 761

Attaches integral membrane proteins to cytoskeletal elements; binds to the erythrocyte membrane protein band 4.2, to Na-K ATPase, to the lymphocyte membrane protein GP85, and to the cytoskeletal proteins fodrin, tubulin, vimentin and desmin. Erythrocyte ankyrins also link spectrin (beta chain) to the cytoplasmic domain of the erythrocytes anion exchange protein; they retain most or all of these binding functions. In skeletal muscle, isoform Mu7 together with obscurin may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Mus musculus (taxid: 10090)

>sp|Q3UES3|TNKS2_MOUSE Tankyrase-2 OS=Mus musculus GN=Tnks2 PE=2 SV=2

 Score =  290 bits (742), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 230/752 (30%), Positives = 342/752 (45%), Gaps = 89/752 (11%)

Query: 97  TPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEA 156
           TPL+ AA      VV YLL  G N     +  + PLH AC +G   +V LL+  GA+  A
Sbjct: 60  TPLHFAAGFGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFGHAEVVNLLLQHGADPNA 119

Query: 157 KTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMAS-------QGDHEAA 209
           +     TPLH AA  G  +V  +L++ GA    +  +G   L +A         GD++  
Sbjct: 120 RDNWNYTPLHEAAIKGKIDVCIVLLQHGAEPTIRNTDGRTALDLADPSAKAVLTGDYK-K 178

Query: 210 TRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACK 269
             +L    +G +E  +  LT L+V  H    R +                  TPLH+A  
Sbjct: 179 DELLESARSGNEEKMMALLTPLNVNCHASDGRKS------------------TPLHLAAG 220

Query: 270 KNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAA 329
            NR K        + + LL   AD +A+      PLH AC    Y+V ELL+K+GA + A
Sbjct: 221 YNRVK--------IVQLLLHHGADVHAKDKGDLVPLHNACSYGHYEVTELLVKHGACVNA 272

Query: 330 TTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRN 389
                 TPLH A+    + +   LL  GA P       ++ + LA  A   + +    + 
Sbjct: 273 MDLWQFTPLHEAASKNRIEVCSLLLSYGADPTLLNCHNKSAIDLAPTAQLKERLSYEFKG 332

Query: 390 GASVDARAREDQTPL--HVASRLRRFSSASQSALTRVRGETPLHLAARA---NQTDIVRI 444
            + + A    D T +  H++  +  F             ET LH AA +    +  I  +
Sbjct: 333 HSLLQAAREADVTRIKKHLSLEMVNFKHPQTH-------ETALHCAAASPYPKRKQICEL 385

Query: 445 LLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQ 504
           LLR GA+ + + +E  TPLHVAS   + D+  ++++H A V+A    G T+LH +A  G 
Sbjct: 386 LLRKGANTNEKTKEFLTPLHVASENAHNDVVEVVVKHEAKVNALDSLGQTSLHRAAHCGH 445

Query: 505 DEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTES 564
            +   +L   G      + +GFT L +  +       Q LLQ+ A +        +L  +
Sbjct: 446 LQTCRLLLSYGCDPNIISLQGFTALQMGNEN-----VQQLLQEGASLGHSEADRQLLEAA 500

Query: 565 GASITATTKK---------------GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGV 609
            A    T KK                 TPLH AA Y R+ + + LLQ  A V ++ K G+
Sbjct: 501 KAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGL 560

Query: 610 TPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNA 669
            PLH A  Y H  VA LL+  GA  +      +TPLH AA K + +I   LL++ A P  
Sbjct: 561 VPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK 620

Query: 670 ESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGL--------------------- 708
           +++ G TPL L  ++G TD+  LL    A +    K  L                     
Sbjct: 621 KNRDGNTPLDL-VKDGDTDIQDLLRGDAALLDAAKKGCLARVKKLSSPDNVNCRDTQGRH 679

Query: 709 -TPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            TPLHL A  + + VA   + +GA+++   K G  PLH A+ +G +++   L++  A VN
Sbjct: 680 STPLHLAAGYNNLEVAEYLLQHGADVNAQDKGGLIPLHNAASYGHVDVAALLIKYNACVN 739

Query: 768 ATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP 799
           AT    +TPLH+A+Q+GR  +  LLL  GA P
Sbjct: 740 ATDKWAFTPLHEAAQKGRTQLCALLLAHGADP 771

Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates poly-ADP-ribosylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates poly-ADP-ribosylation of TERF1, thereby contributing to the regulation of telomere length. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles (By similarity).$.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: 0

>sp|O95271|TNKS1_HUMAN Tankyrase-1 OS=Homo sapiens GN=TNKS PE=1 SV=2

 Score =  287 bits (735), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 232/750 (30%), Positives = 357/750 (47%), Gaps = 94/750 (12%)

Query: 135 ACKWGKVAMVELLISKGANIEAKTRDGL--TPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           AC+ G V+ V+ L+   AN+ AK   G   +PLH AA  G  +V++ L++ GA ++++  
Sbjct: 189 ACRNGDVSRVKRLVD-AANVNAKDMAGRKSSPLHFAAGFGRKDVVEHLLQMGANVHARDD 247

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
            GL PLH A    H     +L+  GA  +       T LH A+  G + V   LL   AD
Sbjct: 248 GGLIPLHNACSFGHAEVVSLLLCQGADPNARDNWNYTPLHEAAIKGKIDVCIVLLQHGAD 307

Query: 253 PNARALNGFTPLHIACKKNR------YKSSHCNHVWVAKTLLDRKA-------DPNARAL 299
           PN R  +G + L +A    +      YK      +  A++  + K        + N  A 
Sbjct: 308 PNIRNTDGKSALDLADPSAKAVLTGEYKKDEL--LEAARSGNEEKLMALLTPLNVNCHAS 365

Query: 300 NG--FTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAG 357
           +G   TPLH+A   NR ++V+LLL++GA + A  + GL PLH A   G   +   LL+ G
Sbjct: 366 DGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHG 425

Query: 358 AAPDTATVRGETPLHLAARANQTDIVRILLRNGA-----SVDARAREDQTPL-HVASRLR 411
           A  +   +   TPLH AA  N+ ++  +LL +GA     +   ++  D  P   +  RL 
Sbjct: 426 ACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLT 485

Query: 412 R-------FSSASQSALTRVRG---------------ETPLHLAARA---NQTDIVRILL 446
                     +A ++ L +V+                ET LH A  +    +  +  +LL
Sbjct: 486 YEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVTELLL 545

Query: 447 RNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDE 506
           R GA+V+ + ++  TPLHVA+   + D+  +L +HGA ++A    G TALH +A  G  +
Sbjct: 546 RKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDTLGQTALHRAALAGHLQ 605

Query: 507 VASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGA 566
              +L   G+  +  + +GFT    AA+ G   + Q +L +  P+ +      +L  S A
Sbjct: 606 TCRLLLSYGSDPSIISLQGFT----AAQMGNEAV-QQILSESTPIRTSDVDYRLLEASKA 660

Query: 567 SITATTK---------------KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTP 611
               T K               +  TPLH AA Y R+ + + LL   A V ++ K G+ P
Sbjct: 661 GDLETVKQLCSSQNVNCRDLEGRHSTPLHFAAGYNRVSVVEYLLHHGADVHAKDKGGLVP 720

Query: 612 LHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAES 671
           LH A  Y H  VA LL+  GAS +      +TPLH AA K + +I   LL++ A P  ++
Sbjct: 721 LHNACSYGHYEVAELLVRHGASVNVADLWKFTPLHEAAAKGKYEICKLLLKHGADPTKKN 780

Query: 672 KAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGL----------------------T 709
           + G TPL L  +EG TD+  LL    A +    K  L                      T
Sbjct: 781 RDGNTPLDL-VKEGDTDIQDLLRGDAALLDAAKKGCLARVQKLCTPENINCRDTQGRNST 839

Query: 710 PLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNAT 769
           PLHL A  + + VA   + +GA+++   K G  PLH A+ +G +++   L++    VNAT
Sbjct: 840 PLHLAAGYNNLEVAEYLLEHGADVNAQDKGGLIPLHNAASYGHVDIAALLIKYNTCVNAT 899

Query: 770 TNLGYTPLHQASQQGRVLIIDLLLGAGAQP 799
               +TPLH+A+Q+GR  +  LLL  GA P
Sbjct: 900 DKWAFTPLHEAAQKGRTQLCALLLAHGADP 929

Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates poly-ADP-ribosylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates poly-ADP-ribosylation of TERF1, thereby contributing to the regulation of telomere length. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: 0

>sp|Q9H2K2|TNKS2_HUMAN Tankyrase-2 OS=Homo sapiens GN=TNKS2 PE=1 SV=1

 Score =  287 bits (734), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 219/725 (30%), Positives = 335/725 (46%), Gaps = 68/725 (9%)

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
           TPLH A  +G+  +VE L+  GAN++A+   GL PLH A   GH  V+++L+  GA   +
Sbjct: 60  TPLHFAAGFGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFGHAEVVNLLLRHGADPNA 119

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHC------GHVRVA 243
           +      PLH A+         VL+ HGA       D  TAL +A         G  +  
Sbjct: 120 RDNWNYTPLHEAAIKGKIDVCIVLLQHGAEPTIRNTDGRTALDLADPSAKAVLTGEYKKD 179

Query: 244 KTLLDRKADPNARALNGFTPLHIACKKNRYKSS-------HCNHVWVAKTLLDRKADPNA 296
           + L   ++    + +   TPL++ C  +  + S         N V + + LL   AD +A
Sbjct: 180 ELLESARSGNEEKMMALLTPLNVNCHASDGRKSTPLHLAAGYNRVKIVQLLLQHGADVHA 239

Query: 297 RALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQA 356
           +      PLH AC    Y+V ELL+K+GA + A      TPLH A+    + +   LL  
Sbjct: 240 KDKGDLVPLHNACSYGHYEVTELLVKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSY 299

Query: 357 GAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPL--HVASRLRRFS 414
           GA P       ++ + LA      + +    +  + + A    D T +  H++  +  F 
Sbjct: 300 GADPTLLNCHNKSAIDLAPTPQLKERLAYEFKGHSLLQAAREADVTRIKKHLSLEMVNFK 359

Query: 415 SASQSALTRVRGETPLHLAARA---NQTDIVRILLRNGASVDARAREDQTPLHVASRLGN 471
                       ET LH AA +    +  I  +LLR GA+++ + +E  TPLHVAS   +
Sbjct: 360 HPQTH-------ETALHCAAASPYPKRKQICELLLRKGANINEKTKEFLTPLHVASEKAH 412

Query: 472 GDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHL 531
            D+  ++++H A V+A    G T+LH +A  G  +   +L   G      + +GFT L +
Sbjct: 413 NDVVEVVVKHEAKVNALDNLGQTSLHRAAYCGHLQTCRLLLSYGCDPNIISLQGFTALQM 472

Query: 532 AAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKK---------------GF 576
             +       Q LLQ+   + +      +L  + A    T KK                 
Sbjct: 473 GNEN-----VQQLLQEGISLGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQS 527

Query: 577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA 636
           TPLH AA Y R+ + + LLQ  A V ++ K G+ PLH A  Y H  VA LL+  GA  + 
Sbjct: 528 TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 587

Query: 637 VAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH 696
                +TPLH AA K + +I   LL++ A P  +++ G TPL L  ++G TD+  LL   
Sbjct: 588 ADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDL-VKDGDTDIQDLLRGD 646

Query: 697 GATVSHQAKNGL----------------------TPLHLCAQEDKVNVATITMFNGAEID 734
            A +    K  L                      TPLHL A  + + VA   + +GA+++
Sbjct: 647 AALLDAAKKGCLARVKKLSSPDNVNCRDTQGRHSTPLHLAAGYNNLEVAEYLLQHGADVN 706

Query: 735 PVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG 794
              K G  PLH A+ +G +++   L++  A VNAT    +TPLH+A+Q+GR  +  LLL 
Sbjct: 707 AQDKGGLIPLHNAASYGHVDVAALLIKYNACVNATDKWAFTPLHEAAQKGRTQLCALLLA 766

Query: 795 AGAQP 799
            GA P
Sbjct: 767 HGADP 771

Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates poly-ADP-ribosylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates poly-ADP-ribosylation of TERF1, thereby contributing to the regulation of telomere length. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: 0

>sp|Q6PFX9|TNKS1_MOUSE Tankyrase-1 OS=Mus musculus GN=Tnks PE=1 SV=1

 Score =  286 bits (733), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 232/750 (30%), Positives = 357/750 (47%), Gaps = 94/750 (12%)

Query: 135 ACKWGKVAMVELLISKGANIEAKTRDGL--TPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           AC+ G V+ V+ L+   AN+ AK   G   +PLH AA  G  +V++ L++ GA ++++  
Sbjct: 182 ACRNGDVSRVKRLVD-AANVNAKDMAGRKSSPLHFAAGFGRKDVVEHLLQMGANVHARDD 240

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
            GL PLH A    H     +L+  GA  +       T LH A+  G + V   LL   AD
Sbjct: 241 GGLIPLHNACSFGHAEVVSLLLCQGADPNARDNWNYTPLHEAAIKGKIDVCIVLLQHGAD 300

Query: 253 PNARALNGFTPLHIACKKNR------YKSSHCNHVWVAKTLLDRKA-------DPNARAL 299
           PN R  +G + L +A    +      YK      +  A++  + K        + N  A 
Sbjct: 301 PNIRNTDGKSALDLADPSAKAVLTGEYKKDEL--LEAARSGNEEKLMALLTPLNVNCHAS 358

Query: 300 NG--FTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAG 357
           +G   TPLH+A   NR ++V+LLL++GA + A  + GL PLH A   G   +   LL+ G
Sbjct: 359 DGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHG 418

Query: 358 AAPDTATVRGETPLHLAARANQTDIVRILLRNGA-----SVDARAREDQTPL-HVASRLR 411
           A  +   +   TPLH AA  N+ ++  +LL +GA     +   ++  D  P   +  RL 
Sbjct: 419 ACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLT 478

Query: 412 R-------FSSASQSALTRVRG---------------ETPLHLAARA---NQTDIVRILL 446
                     +A ++ L +V+                ET LH A  +    +  +  +LL
Sbjct: 479 YEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLL 538

Query: 447 RNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDE 506
           R GA+V+ + ++  TPLHVA+   + D+  +L +HGA ++A    G TALH +A  G  +
Sbjct: 539 RKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQ 598

Query: 507 VASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGA 566
              +L   G+  +  + +GFT    AA+ G   + Q +L +  P+ +      +L  S A
Sbjct: 599 TCRLLLSYGSDPSIISLQGFT----AAQMGNEAV-QQILSESTPMRTSDVDYRLLEASKA 653

Query: 567 SITATTK---------------KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTP 611
               T K               +  TPLH AA Y R+ + + LL   A V ++ K G+ P
Sbjct: 654 GDLETVKQLCSPQNVNCRDLEGRHSTPLHFAAGYNRVSVVEYLLHHGADVHAKDKGGLVP 713

Query: 612 LHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAES 671
           LH A  Y H  VA LL+  GAS +      +TPLH AA K + +I   LL++ A P  ++
Sbjct: 714 LHNACSYGHYEVAELLVRHGASVNVADLWKFTPLHEAAAKGKYEICKLLLKHGADPTKKN 773

Query: 672 KAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGL----------------------T 709
           + G TPL L  +EG TD+  LL    A +    K  L                      T
Sbjct: 774 RDGNTPLDL-VKEGDTDIQDLLRGDAALLDAAKKGCLARVQKLCTPENINCRDTQGRNST 832

Query: 710 PLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNAT 769
           PLHL A  + + VA   + +GA+++   K G  PLH A+ +G +++   L++    VNAT
Sbjct: 833 PLHLAAGYNNLEVAEYLLEHGADVNAQDKGGLIPLHNAASYGHVDIAALLIKYNTCVNAT 892

Query: 770 TNLGYTPLHQASQQGRVLIIDLLLGAGAQP 799
               +TPLH+A+Q+GR  +  LLL  GA P
Sbjct: 893 DKWAFTPLHEAAQKGRTQLCALLLAHGADP 922

Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates poly-ADP-ribosylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates poly-ADP-ribosylation of TERF1, thereby contributing to the regulation of telomere length. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	838
345488337	7482	PREDICTED: hypothetical protein LOC10012	0.855	0.095	0.496	0.0
332022332	7686	Ankyrin-2 [Acromyrmex echinatior]	0.855	0.093	0.494	0.0
340713436	6672	PREDICTED: hypothetical protein LOC10064	0.855	0.107	0.494	0.0
350425715	4893	PREDICTED: hypothetical protein LOC10074	0.855	0.146	0.493	0.0
328786387	6029	PREDICTED: hypothetical protein LOC40905	0.855	0.118	0.493	0.0
383847150	874	PREDICTED: ankyrin-2 [Megachile rotundat	0.855	0.820	0.498	0.0
322778809	1346	hypothetical protein SINV_06859 [Solenop	0.855	0.532	0.496	0.0
270004596	7005	hypothetical protein TcasGA2_TC003960 [T	0.877	0.104	0.480	0.0
347967521	2412	AGAP002272-PC [Anopheles gambiae str. PE	0.842	0.292	0.477	0.0
347967519	2550	AGAP002272-PB [Anopheles gambiae str. PE	0.842	0.276	0.477	0.0

>gi|345488337|ref|XP_001606081.2| PREDICTED: hypothetical protein LOC100122475 [Nasonia vitripennis]

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/758 (49%), Positives = 501/758 (66%), Gaps = 41/758 (5%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           GQ E     +D G  IN  + NG   L++AA++ H  +VR LL++G     AT+   T L
Sbjct: 52  GQLEKVLEFLDAGVDINASNANGLNALHLAAKDGHLEIVRELLARGAIVDAATKKGNTAL 111

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H+A   G+  +V+LL+ KGA++ A++++G TPL+ AA+  HD+V+  L+ KGA     T+
Sbjct: 112 HIASLAGQEEVVQLLVQKGASVNAQSQNGFTPLYMAAQENHDSVVKFLLSKGANQTLATE 171

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
           +G  PL +A Q  H+    VL+ +    D      L ALH+A+     + A  LL    +
Sbjct: 172 DGFTPLAVAMQQGHDKVVAVLLEN----DTRGKVRLPALHIAAKKDDCKAAALLLQNDHN 227

Query: 253 PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN 312
           P+  + +GFTPLHIA         H  +  +A  L D+ A+ N  A +  TP+H+A K  
Sbjct: 228 PDVTSKSGFTPLHIAA--------HYGNDRIASLLYDKGANVNFAAKHNITPMHVAAKWG 279

Query: 313 RYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLH 372
           + K+V LL+  GA+I A T  GLTPLH A+  G   +   L++ GA   + T  G  PLH
Sbjct: 280 KIKMVNLLMSKGANIEAKTRDGLTPLHCAARSGHHEVVDILIEKGAPIGSKTKNGLAPLH 339

Query: 373 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASR----------LRRFSSASQSALT 422
           +A++ +  D  RILL + A VD    +  T LHVA+           L R +  +  AL 
Sbjct: 340 MASQGDHIDAARILLYHRAPVDEVTVDYLTALHVAAHCGHVRVAKLLLDRNADPNARALN 399

Query: 423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
              G TPLH+A + N+  +V +LL++ AS++A      TPLHVAS +G  +I   LLQH 
Sbjct: 400 ---GFTPLHIACKKNRIKVVELLLKHKASIEATTESGLTPLHVASFMGCMNIVIYLLQHE 456

Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQ 542
           AS D PT  G T LH++A+  Q ++  IL  +GA + A  ++  TPLH+A++ G + I  
Sbjct: 457 ASPDIPTVRGETPLHLAARANQTDIIRILLRNGAQVDARAREDQTPLHVASRLGNVDIVM 516

Query: 543 MLLQKDAPVDS----------------QGKVASILTESGASITATTKKGFTPLHLAAKYG 586
           +LLQ  A VD+                Q +VAS+L E+GAS+TATTKKGFTPLHLAAKYG
Sbjct: 517 LLLQHGADVDATTKDLYTPLHIAAKEGQEEVASVLLENGASLTATTKKGFTPLHLAAKYG 576

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLH 646
            M +A++LLQK+APVD+QGKNGVTPLHVASHYDHQNVALLLLD+GASPHA+AKNG+TPLH
Sbjct: 577 NMNVARLLLQKNAPVDAQGKNGVTPLHVASHYDHQNVALLLLDKGASPHAMAKNGHTPLH 636

Query: 647 IAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN 706
           IAA+KNQMDIATTLLEY AK NAESKAGFTPLHLSAQEGHTDMS+LLIEH A  +H+AKN
Sbjct: 637 IAARKNQMDIATTLLEYGAKANAESKAGFTPLHLSAQEGHTDMSTLLIEHKADTNHKAKN 696

Query: 707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
           GLTPLHLCAQEDKVNVA+I + NGA+ID  TKAG+TPLH+A+HFGQ  MVR+L+ +GA+V
Sbjct: 697 GLTPLHLCAQEDKVNVASILVKNGAQIDAKTKAGYTPLHVAAHFGQAAMVRFLLSSGASV 756

Query: 767 NATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           +++T+ GYTPLHQA+QQG  L+I+LLL + A+PNA TN
Sbjct: 757 DSSTSAGYTPLHQAAQQGHTLVINLLLESKAKPNAVTN 794

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022332|gb|EGI62644.1| Ankyrin-2 [Acromyrmex echinatior]

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/758 (49%), Positives = 500/758 (65%), Gaps = 41/758 (5%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           GQ E     +++G  IN  + NG   L++AA++ H  +VR LL++G     AT+   T L
Sbjct: 13  GQLEKVLEYLESGVDINASNANGLNALHLAAKDGHLEIVRELLNRGAIVDAATKKGNTAL 72

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H+A   G+  +V++L+ +GA++ A++++G TPL+ AA+  HD+V+  L+ KGA     T+
Sbjct: 73  HIASLAGQEEVVQVLVQRGASVNAQSQNGFTPLYMAAQENHDSVVKYLLCKGANQTLATE 132

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
           +G  PL +A Q  H+    VL+ +    D      L ALH+A+     + A  LL    +
Sbjct: 133 DGFTPLAVAMQQGHDKVVAVLLEN----DTRGKVRLPALHIAAKKDDCKAAALLLQNDHN 188

Query: 253 PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN 312
           P+  + +GFTPLHIA         H  +  +A  L D+ AD N  A +  TP+H+A K  
Sbjct: 189 PDVTSKSGFTPLHIAA--------HYGNDRIASLLYDKGADVNFAAKHNITPMHVAAKWG 240

Query: 313 RYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLH 372
           + K+V LL+  GA+I A T  GLTPLH A+  G   +   L++ GA   + T  G  PLH
Sbjct: 241 KIKMVNLLMSKGANIEAKTRDGLTPLHCAARSGHHEVVDILIEKGAPIGSKTKNGLAPLH 300

Query: 373 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASR----------LRRFSSASQSALT 422
           +A++ +  D  RILL + A VD    +  T LHVA+           L R +  +  AL 
Sbjct: 301 MASQGDHVDAARILLYHRAPVDEVTVDYLTALHVAAHCGHVRVAKLLLDRNADPNARALN 360

Query: 423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
              G TPLH+A + N+  +V +LL++ AS++A      TPLHVAS +G  +I   LLQH 
Sbjct: 361 ---GFTPLHIACKKNRIKVVELLLKHKASIEATTESGLTPLHVASFMGCMNIVIYLLQHE 417

Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQ 542
           AS D PT  G T LH++A+  Q ++  IL  +GA + A  ++  TPLH+A++ G + I  
Sbjct: 418 ASPDIPTVRGETPLHLAARANQTDIIRILLRNGAQVDARAREEQTPLHVASRLGNVDIVM 477

Query: 543 MLLQKDAPVDS----------------QGKVASILTESGASITATTKKGFTPLHLAAKYG 586
           +LLQ  A VD+                Q +VAS+L E+ AS+TATTKKGFTPLHLAAKYG
Sbjct: 478 LLLQHGAGVDATTKDLYTPLHIAAKEGQEEVASVLLENNASLTATTKKGFTPLHLAAKYG 537

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLH 646
            M +A++LLQK+APVD+QGKNGVTPLHVASHYDHQNVALLLLD+GASPHA+AKNG+TPLH
Sbjct: 538 NMNVARLLLQKNAPVDAQGKNGVTPLHVASHYDHQNVALLLLDKGASPHAMAKNGHTPLH 597

Query: 647 IAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN 706
           IAA+KNQMDIATTLLEY AK NAESKAGFTPLHLSAQEGHTDMS+LLIEH A  +H+AKN
Sbjct: 598 IAARKNQMDIATTLLEYGAKANAESKAGFTPLHLSAQEGHTDMSTLLIEHKADTNHKAKN 657

Query: 707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
           GLTPLHLCAQEDKVNVA+I + NGA+ID  TKAG+TPLH+ASHFGQ  MVR+L+ +GA V
Sbjct: 658 GLTPLHLCAQEDKVNVASILVKNGAQIDAKTKAGYTPLHVASHFGQAAMVRFLLRSGAAV 717

Query: 767 NATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           +++TN GYTPLHQA+QQG  L+I+LLL + A+PNA TN
Sbjct: 718 DSSTNAGYTPLHQAAQQGHTLVINLLLESKAKPNAVTN 755

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340713436|ref|XP_003395249.1| PREDICTED: hypothetical protein LOC100642686 [Bombus terrestris]

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/758 (49%), Positives = 499/758 (65%), Gaps = 41/758 (5%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           GQ E     +++G  IN  + NG   L++AA++ H  +VR LL++G     AT+   T L
Sbjct: 87  GQLEKVLEYLESGVDINASNANGLNALHLAAKDGHLEIVRELLNRGAVVDAATKKGNTAL 146

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H+A   G+  +V+LL+ +GA++ A++++G TPL+ AA+  HD+V+  L+ KGA     T+
Sbjct: 147 HIASLAGQEEVVQLLVQRGASVNAQSQNGFTPLYMAAQENHDSVVKFLLSKGANQTLATE 206

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
           +G  PL +A Q  H+    VL+ +    D      L ALH+A+     + A  LL    +
Sbjct: 207 DGFTPLAVAMQQGHDKVVAVLLEN----DTRGKVRLPALHIAAKKDDCKAAALLLQNDHN 262

Query: 253 PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN 312
           P+  + +GFTPLHIA         H  +  +A  L DR A+ N  A +  TP+H+A K  
Sbjct: 263 PDVTSKSGFTPLHIAA--------HYGNDRIASLLYDRGANVNFAAKHNITPMHVAAKWG 314

Query: 313 RYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLH 372
           + K+V LL+  GA+I A T  GLTPLH A+  G   +   L++ GA   + T  G  PLH
Sbjct: 315 KIKMVNLLMSKGANIEAKTRDGLTPLHCAARSGHHEVVDILIEKGAPIGSKTKNGLAPLH 374

Query: 373 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASR----------LRRFSSASQSALT 422
           +A++ +  D  RILL + A VD    +  T LHVA+           L R +  +  AL 
Sbjct: 375 MASQGDHVDAARILLYHRAPVDEVTVDYLTALHVAAHCGHVRVAKLLLDRNADPNARALN 434

Query: 423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
              G TPLH+A + N+  +V +LL++ AS++A      TPLHVAS +G  +I   LLQH 
Sbjct: 435 ---GFTPLHIACKKNRLKVVELLLKHKASIEATTESGLTPLHVASFMGCMNIVIYLLQHA 491

Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQ 542
           AS D PT  G T LH++A+  Q ++  IL  +GA + A  ++  TPLH+A++ G + I  
Sbjct: 492 ASPDIPTVRGETPLHLAARANQTDIIRILLRNGAQVDARAREEQTPLHVASRLGNVDIVM 551

Query: 543 MLLQKDAPVDS----------------QGKVASILTESGASITATTKKGFTPLHLAAKYG 586
           +LLQ  A VD+                Q +VAS+L E+ AS+TATTKKGFTPLHLAAKYG
Sbjct: 552 LLLQHGADVDATTKDLYTPLHIAAKEGQEEVASVLLENSASLTATTKKGFTPLHLAAKYG 611

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLH 646
            M +A++LLQK+APVD+QGKNGVTPLHVASHYDHQNVALLLLD+GASPHA+AKNG+TPLH
Sbjct: 612 NMNVARLLLQKNAPVDAQGKNGVTPLHVASHYDHQNVALLLLDKGASPHAMAKNGHTPLH 671

Query: 647 IAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN 706
           IAA+KNQMDIATTLLEY AK NAESKAGFTPLHLSAQEGHTDMS+LLIEH A  +H+AKN
Sbjct: 672 IAARKNQMDIATTLLEYGAKANAESKAGFTPLHLSAQEGHTDMSTLLIEHKADTNHKAKN 731

Query: 707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
           GLTPLHLCAQEDKVNVA+I + NGA+ID  TKAG+TPLH+A+HFGQ  MVR+L+ +GA V
Sbjct: 732 GLTPLHLCAQEDKVNVASILVKNGAQIDAKTKAGYTPLHVAAHFGQAAMVRFLLRSGAVV 791

Query: 767 NATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           +++TN GYTPLHQA+QQG  L+I+LLL   A+PN TTN
Sbjct: 792 DSSTNAGYTPLHQAAQQGHTLVINLLLEGKAKPNTTTN 829

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350425715|ref|XP_003494210.1| PREDICTED: hypothetical protein LOC100742486, partial [Bombus impatiens]

 Score =  686 bits (1769), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/758 (49%), Positives = 498/758 (65%), Gaps = 41/758 (5%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           GQ E     +++G  IN  + NG   L++AA++ H  +VR LL++G     AT+   T L
Sbjct: 87  GQLEKVLEYLESGVDINASNANGLNALHLAAKDGHLEIVRELLNRGAVVDAATKKGNTAL 146

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H+A   G+  +V+LL+ +GA++ A++++G TPL+ AA+  HD+V+  L+ KGA     T+
Sbjct: 147 HIASLAGQEEVVQLLVQRGASVNAQSQNGFTPLYMAAQENHDSVVKFLLSKGANQTLATE 206

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
           +G  PL +A Q  H+    VL+ +    D      L ALH+A+     + A  LL    +
Sbjct: 207 DGFTPLAVAMQQGHDKVVAVLLEN----DTRGKVRLPALHIAAKKDDCKAAALLLQNDHN 262

Query: 253 PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN 312
           P+  + +GFTPLHIA         H  +  +A  L DR A+ N  A +  TP+H+A K  
Sbjct: 263 PDVTSKSGFTPLHIAA--------HYGNDRIASLLYDRGANVNFAAKHNITPMHVAAKWG 314

Query: 313 RYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLH 372
           + K+V LL+  GA+I A T  GLTPLH A+  G   +   L++ GA   + T  G  PLH
Sbjct: 315 KIKMVNLLMSKGANIEAKTRDGLTPLHCAARSGHHEVVDILIEKGAPIGSKTKNGLAPLH 374

Query: 373 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASR----------LRRFSSASQSALT 422
           +A++ +  D  RILL + A VD    +  T LHVA+           L R +  +  AL 
Sbjct: 375 MASQGDHVDAARILLYHRAPVDEVTVDYLTALHVAAHCGHVRVAKLLLDRNADPNARALN 434

Query: 423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
              G TPLH+A + N+  +V +LL++ AS++A      TPLHVAS +G  +I   LLQH 
Sbjct: 435 ---GFTPLHIACKKNRLKVVELLLKHKASIEATTESGLTPLHVASFMGCMNIVIYLLQHA 491

Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQ 542
           AS D PT  G T LH++A+  Q ++  IL  +GA + A  ++  TPLH+A++ G + I  
Sbjct: 492 ASPDIPTVRGETPLHLAARANQTDIIRILLRNGAQVDARAREEQTPLHVASRLGNVDIVM 551

Query: 543 MLLQKDAPVDS----------------QGKVASILTESGASITATTKKGFTPLHLAAKYG 586
           +LLQ  A VD+                Q +VAS+L E+ AS+TATTKKGFTPLHLAAKYG
Sbjct: 552 LLLQHGADVDATTKDLYTPLHIAAKEGQEEVASVLLENSASLTATTKKGFTPLHLAAKYG 611

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLH 646
            M +A++LLQK+APVD+QGKNGVTPLHVASHYDHQNVALLLLD+GASPHA+AKNG+TPLH
Sbjct: 612 NMNVARLLLQKNAPVDAQGKNGVTPLHVASHYDHQNVALLLLDKGASPHAMAKNGHTPLH 671

Query: 647 IAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN 706
           IAA+KNQMDIATTLLEY AK NAESKAGFTPLHLSAQEGHTDMS+LL EH A  +H+AKN
Sbjct: 672 IAARKNQMDIATTLLEYGAKANAESKAGFTPLHLSAQEGHTDMSTLLSEHKADTNHKAKN 731

Query: 707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
           GLTPLHLCAQEDKVNVA+I + NGA+ID  TKAG+TPLH+A+HFGQ  MVR+L+ +GA V
Sbjct: 732 GLTPLHLCAQEDKVNVASILVKNGAQIDAKTKAGYTPLHVAAHFGQAAMVRFLLRSGAVV 791

Query: 767 NATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           +++TN GYTPLHQA+QQG  L+I+LLL   A+PN TTN
Sbjct: 792 DSSTNAGYTPLHQAAQQGHTLVINLLLEGKAKPNTTTN 829

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328786387|ref|XP_392578.4| PREDICTED: hypothetical protein LOC409051 [Apis mellifera]

 Score =  684 bits (1766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/758 (49%), Positives = 497/758 (65%), Gaps = 41/758 (5%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           GQ E     +++G  IN  + NG   L++AA++ H  +VR LL +G     AT+   T L
Sbjct: 89  GQLEKVLEYLESGVDINASNANGLNALHLAAKDGHLEIVRELLKRGAVVDAATKKGNTAL 148

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H+A   G+  +V+LL+ +GA++ A++++G TPL+ AA+  HD+V+  L+ KGA     T+
Sbjct: 149 HIASLAGQEEVVQLLVQRGASVNAQSQNGFTPLYMAAQENHDSVVKFLLSKGANQTLATE 208

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
           +G  PL +A Q  H+    VL+ +    D      L ALH+A+     + A  LL    +
Sbjct: 209 DGFTPLAVAMQQGHDKVVAVLLEN----DTRGKVRLPALHIAAKKDDCKAAALLLQNDHN 264

Query: 253 PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN 312
           P+  + +GFTPLHIA         H  +  +A  L DR AD N  A +  TP+H+A K  
Sbjct: 265 PDVTSKSGFTPLHIAA--------HYGNDRIASLLYDRGADVNFAAKHNITPMHVAAKWG 316

Query: 313 RYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLH 372
           + K+V LL+  GA+I A T  GLTPLH A+  G   +   L++ GA   + T  G  PLH
Sbjct: 317 KIKMVNLLMSKGANIEAKTRDGLTPLHCAARSGHHEVVDILIEKGAPIGSKTKNGLAPLH 376

Query: 373 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASR----------LRRFSSASQSALT 422
           +A++ +  D  RILL + A VD    +  T LHVA+           L R +  +  AL 
Sbjct: 377 MASQGDHVDAARILLYHRAPVDEVTVDYLTALHVAAHCGHVRVAKLLLDRNADPNARALN 436

Query: 423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
              G TPLH+A + N+  +V +LL++ AS++A      TPLHVAS +G  +I   LLQH 
Sbjct: 437 ---GFTPLHIACKKNRLKVVELLLKHKASIEATTESGLTPLHVASFMGCMNIVIYLLQHA 493

Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQ 542
           AS D PT  G T LH++A+  Q ++  IL  +GA + A  ++  TPLH+A++ G + I  
Sbjct: 494 ASPDIPTVRGETPLHLAARANQTDIIRILLRNGAQVDARAREEQTPLHVASRLGNVDIVM 553

Query: 543 MLLQKDAPVDS----------------QGKVASILTESGASITATTKKGFTPLHLAAKYG 586
           +LLQ  A VD+                Q +VAS+L E+GAS+TATTKKGFTPLHLAAKYG
Sbjct: 554 LLLQHGADVDATTKDLYTPLHIAAKEGQEEVASVLLENGASLTATTKKGFTPLHLAAKYG 613

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLH 646
            M +A++LLQ++APVD+QGKNGVTPLHVASHYDHQNVALLLLD+GASPHA+AKNG+TPLH
Sbjct: 614 NMNVARLLLQRNAPVDAQGKNGVTPLHVASHYDHQNVALLLLDKGASPHAMAKNGHTPLH 673

Query: 647 IAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN 706
           IAA+KNQMDIATTLLEY AK NAESKAGFTPLHLSAQEGHTDMS+LLIEH A  +H+AKN
Sbjct: 674 IAARKNQMDIATTLLEYGAKANAESKAGFTPLHLSAQEGHTDMSTLLIEHKADTNHKAKN 733

Query: 707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
           GLTPLHLCAQEDKVNVA+I + NGA+ID  TKAG+TPLH+A+HFGQ  MVR+L+ + A V
Sbjct: 734 GLTPLHLCAQEDKVNVASILVKNGAQIDAKTKAGYTPLHVAAHFGQAAMVRFLLRSDAAV 793

Query: 767 NATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           +++TN GYTPLHQA+QQG  L+I+LLL   A+PN  TN
Sbjct: 794 DSSTNAGYTPLHQAAQQGHTLVINLLLEGKAKPNTITN 831

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383847150|ref|XP_003699218.1| PREDICTED: ankyrin-2 [Megachile rotundata]

 Score =  683 bits (1762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/758 (49%), Positives = 500/758 (65%), Gaps = 41/758 (5%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           GQ E     +++G  IN  + NG   L++AA++ H  +VR LL++G     AT+   T L
Sbjct: 33  GQLEKVLEHLESGVDINASNANGLNALHLAAKDGHLEIVRELLNRGAVVDAATKKGNTAL 92

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H+A   G+  +V+LL+ +GA++ A++++G TPL+ AA+  HD+V+  L+ KGA     T+
Sbjct: 93  HIASLAGQEEVVQLLVQRGASVNAQSQNGFTPLYMAAQENHDSVVKYLLSKGANQTLATE 152

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
           +G  PL +A Q  H+    VL+ +    D      L ALH+A+     + A  LL    +
Sbjct: 153 DGFTPLAVAMQQGHDKVVAVLLEN----DTRGKVRLPALHIAAKKDDCKAAALLLQNDHN 208

Query: 253 PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN 312
           P+  + +GFTPLHIA        +H  +  +A  L DR AD N  A +  TP+H+A K  
Sbjct: 209 PDVTSKSGFTPLHIA--------AHYGNDRIASLLYDRGADVNFAAKHNITPMHVAAKWG 260

Query: 313 RYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLH 372
           + K+V LL+  GA+I A T  GLTPLH A+  G   +   L++ GA   + T  G  PLH
Sbjct: 261 KIKMVNLLMSKGANIEAKTRDGLTPLHCAARSGHHEVVDILIEKGAPIGSKTKNGLAPLH 320

Query: 373 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASR----------LRRFSSASQSALT 422
           +A++ +  D  RILL + A VD    +  T LHVA+           L R +  +  AL 
Sbjct: 321 MASQGDHVDAARILLYHRAPVDEVTVDYLTALHVAAHCGHVRVAKLLLDRNADPNARALN 380

Query: 423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
              G TPLH+A + N+  +V +LL++ AS++A      TPLHVAS +G  +I   LLQH 
Sbjct: 381 ---GFTPLHIACKKNRLKVVELLLKHKASIEATTESGLTPLHVASFMGCMNIVIYLLQHA 437

Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQ 542
           AS D  T  G T LH++A+  Q ++  IL  +GA + AT ++  TPLH+A++ G + I  
Sbjct: 438 ASPDVRTVRGETPLHLAARANQTDIIRILLRNGAQVDATAREEQTPLHVASRLGNVDIVM 497

Query: 543 MLLQKDAPVDS----------------QGKVASILTESGASITATTKKGFTPLHLAAKYG 586
           +LLQ  A VD+                Q +VAS+L E+GAS+TATTKKGFTPLHLAAKYG
Sbjct: 498 LLLQHGAGVDATTKDLYTPLHIAAKEGQEEVASVLLENGASLTATTKKGFTPLHLAAKYG 557

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLH 646
            M +A++LLQK+APVD+QGKNGVTPLHVASHYDHQNVALLLLD+GASPHA+AKNG+TPLH
Sbjct: 558 NMNVARLLLQKNAPVDAQGKNGVTPLHVASHYDHQNVALLLLDKGASPHAMAKNGHTPLH 617

Query: 647 IAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN 706
           IAA+KNQMDIATTLLEY AK NAESKAGFTPLHLSAQEGHTDMS+LLIEH A  +H+AKN
Sbjct: 618 IAARKNQMDIATTLLEYGAKANAESKAGFTPLHLSAQEGHTDMSTLLIEHKADTNHKAKN 677

Query: 707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
           GLTPLHLCAQEDKVNVA+I + NGA ID  TKAG+TPLH+ASHFGQ  MVR+L+ +GA V
Sbjct: 678 GLTPLHLCAQEDKVNVASILVKNGAHIDAKTKAGYTPLHVASHFGQAAMVRFLLRSGAAV 737

Query: 767 NATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           +++TN GYTPLHQA+QQG  L+I+LLL   A+PN TTN
Sbjct: 738 DSSTNAGYTPLHQAAQQGHTLVINLLLEGKAKPNTTTN 775

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322778809|gb|EFZ09225.1| hypothetical protein SINV_06859 [Solenopsis invicta]

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/758 (49%), Positives = 501/758 (66%), Gaps = 41/758 (5%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           GQ E     +++G  IN  + NG   L++AA++ H  +VR LL++G     AT+   T L
Sbjct: 15  GQLEKVLEYLESGVDINASNANGLNALHLAAKDGHLEIVRKLLNRGAIVDAATKKGNTAL 74

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H+A   G+  +V+LL+ +GA++ A++++G TPL+ AA+  HD+V+  L+ KGA     T+
Sbjct: 75  HIASLAGQEEVVQLLVLRGASVNAQSQNGFTPLYMAAQENHDSVVKYLLSKGANQTLATE 134

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
           +G  PL +A Q  H+    VL+ +    D      L ALH+A+     + A  LL    +
Sbjct: 135 DGFTPLAVAMQQGHDKVVAVLLEN----DSRGKVRLPALHIAAKKDDCKAATLLLLNDHN 190

Query: 253 PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN 312
           P+  + +GFTPLHIA        +H  +  +A  L D+ AD N  A +  TP+H+A K  
Sbjct: 191 PDVTSKSGFTPLHIA--------AHYGNDRIASLLYDKGADINFAAKHNITPMHVAAKWG 242

Query: 313 RYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLH 372
           + K+V LL+  GA+I A T  GLTPLH A+  G   +   L++ GA   + T  G  PLH
Sbjct: 243 KIKMVNLLMSKGANIEAKTRDGLTPLHCAARSGHHEVVDILIEKGAPIGSKTKNGLAPLH 302

Query: 373 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASR----------LRRFSSASQSALT 422
           +A++ +  D  RILL + A VD    +  T LHVA+           L R +  +  AL 
Sbjct: 303 MASQGDHVDAARILLYHRAPVDEVTVDYLTALHVAAHCGHVRVAKLLLDRNADPNARALN 362

Query: 423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
              G TPLH+A + N+  +V +LL++ AS++A      TPLHVAS +G  +I   LLQH 
Sbjct: 363 ---GFTPLHIACKKNRIKVVELLLKHKASIEATTESGLTPLHVASFMGCMNIVIYLLQHE 419

Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQ 542
           AS D PT  G T LH++A+  Q ++  IL  +GA + A  ++  TPLH+A++ G + I  
Sbjct: 420 ASPDIPTVRGETPLHLAARANQTDIIRILLRNGAQVDARAREEQTPLHVASRLGNVDIVM 479

Query: 543 MLLQKDAPVDS----------------QGKVASILTESGASITATTKKGFTPLHLAAKYG 586
           +LLQ  A VD+                Q +VAS+L E+ AS+TATTKKGFTPLHLAAKYG
Sbjct: 480 LLLQHGAGVDATTKDLYTPLHIAAKEGQEEVASVLLENNASLTATTKKGFTPLHLAAKYG 539

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLH 646
            M +A++LLQK+APVD+QGKNGVTPLHVASHYDHQNVALLLLD+GASPHA+AKNG+TPLH
Sbjct: 540 NMNVARLLLQKNAPVDAQGKNGVTPLHVASHYDHQNVALLLLDKGASPHAMAKNGHTPLH 599

Query: 647 IAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN 706
           IAA+KNQMDIATTLLEY AK NAESKAGFTPLHLSAQEGHTDMS+LLIEH A  +H+AKN
Sbjct: 600 IAARKNQMDIATTLLEYGAKANAESKAGFTPLHLSAQEGHTDMSTLLIEHKADTNHKAKN 659

Query: 707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
           GLTPLHLCAQEDKVNVA+I + NGA+ID  TKAG+TPLH+ASHFGQ  MVR+L+ +GA V
Sbjct: 660 GLTPLHLCAQEDKVNVASILVKNGAQIDAKTKAGYTPLHVASHFGQAAMVRFLLRSGAAV 719

Query: 767 NATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           +++TN GYTPLHQA+QQG  L+I+LLL + A+PNA TN
Sbjct: 720 DSSTNAGYTPLHQAAQQGHTLVINLLLESKAKPNAVTN 757

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270004596|gb|EFA01044.1| hypothetical protein TcasGA2_TC003960 [Tribolium castaneum]

 Score =  660 bits (1703), Expect = 0.0,   Method: Composition-based stats.
 Identities = 373/776 (48%), Positives = 497/776 (64%), Gaps = 41/776 (5%)

Query: 55  LSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYL 114
           L N   + + S  +    GQ E     +++   IN  + NG   L++A+++ H  +V+ L
Sbjct: 164 LDNKNTDGNTSFLRAARNGQLEKVLEHLESNIDINTSNANGLNALHLASKDGHVEIVKEL 223

Query: 115 LSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHD 174
           L +G     AT+   T LH+A   G+  +V+LL+S GA++  ++++G TPL+ AA+  HD
Sbjct: 224 LKRGAVIDAATKKGNTALHIASLAGQEEVVKLLVSHGASVNVQSQNGFTPLYMAAQENHD 283

Query: 175 NVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVA 234
           NV+  L+  GA     T++G  PL +A Q  H+    VL+ +    D      L ALH+A
Sbjct: 284 NVVKYLLANGANQSLSTEDGFTPLAVAMQQGHDKVVTVLLEN----DTRGKVRLPALHIA 339

Query: 235 SHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADP 294
           +    V+ AK LL+ + +P+  + +GFTPLHIA        SH  +  +A  LL + AD 
Sbjct: 340 AKKDDVKAAKLLLENEHNPDVTSKSGFTPLHIA--------SHYGNQAIANLLLQKGADV 391

Query: 295 NARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLL 354
           N  A +  TPLH+A K  +  +V +LL++GA+I + T  GLTPLH A+  G   +   LL
Sbjct: 392 NYAAKHNITPLHVAAKWGKTNMVTVLLEHGANIESKTRDGLTPLHCAARSGHEQVVDMLL 451

Query: 355 QAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR----- 409
           + GA   + T  G  PLH+AA+ +  D  RILL + A VD    +  T LHVA+      
Sbjct: 452 EKGAPISSKTKNGLAPLHMAAQGDHVDAARILLYHRAPVDEVTVDYLTALHVAAHCGHVR 511

Query: 410 -----LRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLH 464
                L R + A+  AL    G TPLH+A + N+  +V +LL++GAS+ A      TPLH
Sbjct: 512 VAKLLLDRQADANARALN---GFTPLHIACKKNRIKVVELLLKHGASIGATTESGLTPLH 568

Query: 465 VASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKK 524
           VAS +G  +I   LLQH AS D PT  G T LH++A+  Q ++  IL  +GA + A  ++
Sbjct: 569 VASFMGCMNIVIYLLQHDASPDVPTVRGETPLHLAARANQTDIIRILLRNGAQVDARARE 628

Query: 525 GFTPLHLAAKYGRMKIAQMLLQKDAPVDS----------------QGKVASILTESGASI 568
             TPLH+A++ G + I  +LLQ  A VD+                Q +VA+ L + GAS+
Sbjct: 629 QQTPLHIASRLGNVDIVMLLLQHGAKVDNTTKDMYTALHIAAKEGQDEVAAALIDHGASL 688

Query: 569 TATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLL 628
            ATTKKGFTPLHLAAKYG +K+A++LLQK+APVD+QGKNGVTPLHVASHYDHQNVALLLL
Sbjct: 689 NATTKKGFTPLHLAAKYGHLKVAKLLLQKEAPVDAQGKNGVTPLHVASHYDHQNVALLLL 748

Query: 629 DRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD 688
           ++GASP+A AKNG+TPLHIAAKKNQMDIA TLLEY AKPNAESKAGFTPLHLSAQEGH D
Sbjct: 749 EKGASPYATAKNGHTPLHIAAKKNQMDIANTLLEYGAKPNAESKAGFTPLHLSAQEGHCD 808

Query: 689 MSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS 748
           M+ LLIEH A  +H+A+NGL PLHLCAQEDKV VA I + NG E+D  TK G+TPLHIA 
Sbjct: 809 MTDLLIEHKADTNHRARNGLAPLHLCAQEDKVPVAEILVKNGGEVDASTKNGYTPLHIAC 868

Query: 749 HFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           H+GQ+NMVR+L+ +GANV A T LGYTPLHQA+QQG   I++ LL   AQPNA TN
Sbjct: 869 HYGQINMVRFLLSHGANVKANTALGYTPLHQAAQQGHTNIVNTLLENSAQPNAVTN 924

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347967521|ref|XP_003436079.1| AGAP002272-PC [Anopheles gambiae str. PEST] gi|333466257|gb|EGK96183.1| AGAP002272-PC [Anopheles gambiae str. PEST]

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/747 (47%), Positives = 479/747 (64%), Gaps = 41/747 (5%)

Query: 84  NGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAM 143
           N   IN  + NG   L++A+++ H  VV  LL++G     AT+   T LH+A   G+  +
Sbjct: 27  NNIDINTCNANGLNALHLASKDGHVAVVTELLARGATVDAATKKGNTALHIASLAGQEDV 86

Query: 144 VELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQ 203
           V+LLI   A++  ++++G TPL+ AA+  HD+V+ +L+  GA     T++G  PL +A Q
Sbjct: 87  VKLLIKHNASVNVQSQNGFTPLYMAAQENHDSVVRLLLSNGANQSLATEDGFTPLAVAMQ 146

Query: 204 GDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTP 263
             H+    VL+      D      L ALH+A+    V+ A  LL+   +P+  + +GFTP
Sbjct: 147 QGHDKVVAVLLES----DTRGKVRLPALHIAAKKDDVKAATLLLENDHNPDVTSKSGFTP 202

Query: 264 LHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKY 323
           LHIA        SH  +  +A  L+ + AD N  A +  +PLH+A K  +  +V LLL+ 
Sbjct: 203 LHIA--------SHYGNEAMANLLIQKGADVNYAAKHNISPLHVAAKWGKTNMVALLLEK 254

Query: 324 GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIV 383
           GASI + T  GLTPLH A+  G   +   LL+ GA   + T  G  PLH+AA+    D  
Sbjct: 255 GASIESKTRDGLTPLHCAARSGHEQVVDMLLERGAPISSKTKNGLAPLHMAAQGEHVDAA 314

Query: 384 RILLRNGASVDARAREDQTPLHVASR----------LRRFSSASQSALTRVRGETPLHLA 433
           RILL + A VD    +  T LHVA+           L R + A+  AL    G TPLH+A
Sbjct: 315 RILLYHRAPVDEVTVDYLTALHVAAHCGHVRVAKLLLDRNADANARALN---GFTPLHIA 371

Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
            + N+  +V +LL++GAS+ A      TPLHVAS +G  +I   LLQH AS D PT  G 
Sbjct: 372 CKKNRIKVVELLLKHGASISATTESGLTPLHVASFMGCMNIVIYLLQHDASPDVPTVRGE 431

Query: 494 TALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS 553
           T LH++A+  Q ++  IL  +GA + A  ++  TPLH+A++ G + I  +LLQ  A VD+
Sbjct: 432 TPLHLAARANQTDIIRILLRNGAQVDARAREQQTPLHIASRLGNVDIVMLLLQHGAQVDA 491

Query: 554 ----------------QGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 597
                           Q +VA++L  +GA I ATTKKGFTPLHL AKYG MK+A++LL+K
Sbjct: 492 VTKDMYTALHIAAKEGQDEVAAVLLNNGAQIDATTKKGFTPLHLTAKYGHMKVAELLLEK 551

Query: 598 DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIA 657
            APVD+QGKNGVTPLHVASHYDHQNVA+LLL++GASPHA AKNG+TPLHIAA+KNQ+DIA
Sbjct: 552 SAPVDAQGKNGVTPLHVASHYDHQNVAMLLLEKGASPHATAKNGHTPLHIAARKNQIDIA 611

Query: 658 TTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQE 717
            TLL+Y A+ NAESKAGFTPLHLSAQEGHT+MS LL+E  A   HQA+NGLTP+HLCAQE
Sbjct: 612 NTLLKYEAQANAESKAGFTPLHLSAQEGHTEMSGLLLESKANPDHQARNGLTPMHLCAQE 671

Query: 718 DKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPL 777
           D+V+VA + + +GA +   TKAG+TPLH+ASHFGQ NMVRYL+E   +VNA+T +GYTPL
Sbjct: 672 DRVSVAQVLVKHGANLQAATKAGYTPLHVASHFGQANMVRYLIEQQVDVNASTGIGYTPL 731

Query: 778 HQASQQGRVLIIDLLLGAGAQPNATTN 804
           HQASQQG   I+++LL + A PNA TN
Sbjct: 732 HQASQQGHCHIVNILLESNADPNAITN 758

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347967519|ref|XP_003436078.1| AGAP002272-PB [Anopheles gambiae str. PEST] gi|333466256|gb|EGK96182.1| AGAP002272-PB [Anopheles gambiae str. PEST]

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/747 (47%), Positives = 479/747 (64%), Gaps = 41/747 (5%)

Query: 84  NGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAM 143
           N   IN  + NG   L++A+++ H  VV  LL++G     AT+   T LH+A   G+  +
Sbjct: 165 NNIDINTCNANGLNALHLASKDGHVAVVTELLARGATVDAATKKGNTALHIASLAGQEDV 224

Query: 144 VELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQ 203
           V+LLI   A++  ++++G TPL+ AA+  HD+V+ +L+  GA     T++G  PL +A Q
Sbjct: 225 VKLLIKHNASVNVQSQNGFTPLYMAAQENHDSVVRLLLSNGANQSLATEDGFTPLAVAMQ 284

Query: 204 GDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTP 263
             H+    VL+      D      L ALH+A+    V+ A  LL+   +P+  + +GFTP
Sbjct: 285 QGHDKVVAVLLES----DTRGKVRLPALHIAAKKDDVKAATLLLENDHNPDVTSKSGFTP 340

Query: 264 LHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKY 323
           LHIA        SH  +  +A  L+ + AD N  A +  +PLH+A K  +  +V LLL+ 
Sbjct: 341 LHIA--------SHYGNEAMANLLIQKGADVNYAAKHNISPLHVAAKWGKTNMVALLLEK 392

Query: 324 GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIV 383
           GASI + T  GLTPLH A+  G   +   LL+ GA   + T  G  PLH+AA+    D  
Sbjct: 393 GASIESKTRDGLTPLHCAARSGHEQVVDMLLERGAPISSKTKNGLAPLHMAAQGEHVDAA 452

Query: 384 RILLRNGASVDARAREDQTPLHVASR----------LRRFSSASQSALTRVRGETPLHLA 433
           RILL + A VD    +  T LHVA+           L R + A+  AL    G TPLH+A
Sbjct: 453 RILLYHRAPVDEVTVDYLTALHVAAHCGHVRVAKLLLDRNADANARALN---GFTPLHIA 509

Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
            + N+  +V +LL++GAS+ A      TPLHVAS +G  +I   LLQH AS D PT  G 
Sbjct: 510 CKKNRIKVVELLLKHGASISATTESGLTPLHVASFMGCMNIVIYLLQHDASPDVPTVRGE 569

Query: 494 TALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS 553
           T LH++A+  Q ++  IL  +GA + A  ++  TPLH+A++ G + I  +LLQ  A VD+
Sbjct: 570 TPLHLAARANQTDIIRILLRNGAQVDARAREQQTPLHIASRLGNVDIVMLLLQHGAQVDA 629

Query: 554 ----------------QGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 597
                           Q +VA++L  +GA I ATTKKGFTPLHL AKYG MK+A++LL+K
Sbjct: 630 VTKDMYTALHIAAKEGQDEVAAVLLNNGAQIDATTKKGFTPLHLTAKYGHMKVAELLLEK 689

Query: 598 DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIA 657
            APVD+QGKNGVTPLHVASHYDHQNVA+LLL++GASPHA AKNG+TPLHIAA+KNQ+DIA
Sbjct: 690 SAPVDAQGKNGVTPLHVASHYDHQNVAMLLLEKGASPHATAKNGHTPLHIAARKNQIDIA 749

Query: 658 TTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQE 717
            TLL+Y A+ NAESKAGFTPLHLSAQEGHT+MS LL+E  A   HQA+NGLTP+HLCAQE
Sbjct: 750 NTLLKYEAQANAESKAGFTPLHLSAQEGHTEMSGLLLESKANPDHQARNGLTPMHLCAQE 809

Query: 718 DKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPL 777
           D+V+VA + + +GA +   TKAG+TPLH+ASHFGQ NMVRYL+E   +VNA+T +GYTPL
Sbjct: 810 DRVSVAQVLVKHGANLQAATKAGYTPLHVASHFGQANMVRYLIEQQVDVNASTGIGYTPL 869

Query: 778 HQASQQGRVLIIDLLLGAGAQPNATTN 804
           HQASQQG   I+++LL + A PNA TN
Sbjct: 870 HQASQQGHCHIVNILLESNADPNAITN 896

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	838
ZFIN|ZDB-GENE-060621-1	3980	ank3a "ankyrin 3a" [Danio reri	0.886	0.186	0.409	1.3e-144
UNIPROTKB|F1PJ90	1782	ANK3 "Uncharacterized protein"	0.853	0.401	0.407	4.8e-142
UNIPROTKB|F1NNX6	1824	ANK3 "Uncharacterized protein"	0.836	0.384	0.408	7.8e-142
UNIPROTKB|F1NJ80	1699	ANK3 "Uncharacterized protein"	0.836	0.412	0.408	7.8e-142
UNIPROTKB|F1NNX8	1737	ANK3 "Uncharacterized protein"	0.836	0.403	0.408	7.8e-142
UNIPROTKB|F1LM13	1783	Ank3 "Protein Ank3" [Rattus no	0.850	0.399	0.405	7.8e-142
UNIPROTKB|F1NNX7	1915	ANK3 "Uncharacterized protein"	0.836	0.366	0.408	7.9e-142
UNIPROTKB|F1LPH6	1961	Ank3 "Protein Ank3" [Rattus no	0.850	0.363	0.405	1.9e-141
UNIPROTKB|K7GLA8	1847	ANK3 "Uncharacterized protein"	0.850	0.386	0.405	2.1e-141
MGI|MGI:88026	1961	Ank3 "ankyrin 3, epithelial" [	0.853	0.364	0.404	6.9e-141

ZFIN|ZDB-GENE-060621-1 ank3a "ankyrin 3a" [Danio rerio (taxid:7955)]

 Score = 1430 (508.4 bits), Expect = 1.3e-144, P = 1.3e-144
 Identities = 325/794 (40%), Positives = 477/794 (60%)

Query:    65 SNTKF-EATGQEEVAKIL--VDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQ 121
             SN  +  A     + K+L  +  G  IN+ + NG   L++A++E H  VV  LL  G N 
Sbjct:     4 SNASYLRAARAGNLEKVLDYLKTGVDINICNQNGLNALHLASKEGHVEVVAELLKLGANV 63

Query:   122 TLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILI 181
               AT+   T LH+A   G+  +V  L++ GAN+ A++++G TPL+ AA+  H +V+  L+
Sbjct:    64 DAATKKGNTALHIASLAGQTEVVRELVTNGANVNAQSQNGFTPLYMAAQENHLDVVRFLL 123

Query:   182 EKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVR 241
             E  ++    T++G  PL +A Q  H+    +L+ +    D      L ALH+A+     +
Sbjct:   124 ENNSSQSIATEDGFTPLAVALQQGHDQVVSLLLEN----DTKGKVRLPALHIAARKDDTK 179

Query:   242 VAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNG 301
              A  LL    + +  + +GFTPLHIA        +H  ++ VA  LL+R A  +  A N 
Sbjct:   180 SAALLLQNDHNADVESKSGFTPLHIA--------AHYGNINVATLLLNRGAAVDFMARND 231

Query:   302 FTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPD 361
              TPLH+A K+    +V+LLL  G+ I A T+ GLTPLH  +  G   +   LL  GA   
Sbjct:   232 ITPLHVASKRGNGNMVKLLLDRGSKIEAKTKDGLTPLHCGARSGHEQVVEMLLDRGAPIL 291

Query:   362 TATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSAS---- 417
             + T  G +PLH+A + +  + V++LL++ A VD    +  T LHVA+    +  A     
Sbjct:   292 SKTKNGLSPLHMATQGDHLNCVQLLLQHNAPVDDVTNDYLTALHVAAHCGHYKVAKVIVD 351

Query:   418 QSALTRVR---GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDI 474
             + A    +   G TPLH+A + N+  ++ +LL++GAS+ A      TP+HVA+ +G+ +I
Sbjct:   352 KKANPNAKALNGFTPLHIACKKNRVKVMELLLKHGASLQAVTESGLTPIHVAAFMGHENI 411

Query:   475 ASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAK 534
                L  HGAS +     G TALH++A+ GQ +V   L ++GA +          LH+A++
Sbjct:   412 VKQLTHHGASPNTTNVRGETALHMAARAGQIDVVRYLLQNGAKV----------LHIASR 461

Query:   535 YGRMKIAQMLLQKDA-----------PV-----DSQGKVASILTESGASITATTKKGFTP 578
              G+++I Q LLQK A           P+     +   ++A++L E G+S++A TKKGFTP
Sbjct:   462 LGKLEIVQQLLQKGALPNAATTSGYTPLHLSAREGHQEIAALLLEQGSSLSAATKKGFTP 521

Query:   579 LHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVA 638
             LH+AAKYG++++A +LLQK A  D+ GK+G+TPLHVA+HYD+Q VALLLLD+GASPH+ A
Sbjct:   522 LHVAAKYGQLEVANLLLQKKAAPDAAGKSGLTPLHVAAHYDNQRVALLLLDQGASPHSPA 581

Query:   639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
             KNGYTPLHIAAKKNQ++I TTLLEY A+ N  ++ G +PLHL+AQEG  D+ SLL+   A
Sbjct:   582 KNGYTPLHIAAKKNQLEIGTTLLEYGAECNTVTRQGISPLHLAAQEGSVDLVSLLLTKQA 641

Query:   699 TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY 758
              V+   KNGLTPLHL AQ+DK  V  + + +GAEID  TK+G+TPLH+A H+G + M  +
Sbjct:   642 NVNMGNKNGLTPLHLAAQDDKAGVTEVLLNHGAEIDAQTKSGYTPLHVACHYGNMKMANF 701

Query:   759 LVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT-NLFCCATILVKNG- 816
             L+EN A  NA T  GYTPLHQA+QQG   II++LL  GA PN  T N     +I  + G 
Sbjct:   702 LLENQAKPNAKTKNGYTPLHQAAQQGHTHIINMLLQYGASPNELTLNGNTALSIARRLGY 761

Query:   817 -AEIDPVTKLSDEH 829
              + +D +  ++DE+
Sbjct:   762 ISVVDTLRGVTDEN 775

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1PJ90 ANK3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1389 (494.0 bits), Expect = 4.8e-142, P = 4.8e-142
 Identities = 320/786 (40%), Positives = 456/786 (58%)

Query:    59 KLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKG 118
             K + + S  +    G  E A   + NG  IN+ + NG   L++A++E H  VV  LL + 
Sbjct:    38 KSDANASYLRAARAGHLEKALDYIKNGVDINICNQNGLNALHLASKEGHVEVVSELLQRE 97

Query:   119 GNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVID 178
              N   AT+   T LH+A   G+  +V++L++ GAN+ A++++G TPL+ AA+  H  V+ 
Sbjct:    98 ANVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVK 157

Query:   179 ILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCG 238
              L++ GA+    T++G  PL +A Q  H+    +L+ +    D      L ALH+A+   
Sbjct:   158 FLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLEN----DTKGKVRLPALHIAARKD 213

Query:   239 HVRVAKTLLDRKADPNARALNGFTPLHIACKK----------NR---------------Y 273
               + A  LL    + +  + +GFTPLHIA             NR               +
Sbjct:   214 DTKAAALLLQNDNNADIESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLH 273

Query:   274 KSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTES 333
              +S   +  + K LLDR A  +A+  +G TPLH   +    +VVE+LL   A I + T++
Sbjct:   274 VASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKN 333

Query:   334 GLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASV 393
             GL+PLH+A+    +N    LLQ     D  T    T LH+AA      + ++LL   A+ 
Sbjct:   334 GLSPLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANP 393

Query:   394 DARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVD 453
             +A+A                          + G TPLH+A + N+  ++ +LL++GAS+ 
Sbjct:   394 NAKA--------------------------LNGFTPLHIACKKNRIKVMELLLKHGASIQ 427

Query:   454 ARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTE 513
             A      TP+HVA+ +G+ +I S L+ HGAS +     G TALH++A+ GQ EV   L +
Sbjct:   428 AVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQ 487

Query:   514 SGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA-----------PVDSQGK-----V 557
              GA + A  K   TPLH++A+ G+  I Q LLQ+ A           P+    +     V
Sbjct:   488 DGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDV 547

Query:   558 ASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASH 617
             A+ L + GAS++ TTKKGFTPLH+AAKYG++++A +LLQK A  D+ GK+G+TPLHVA+H
Sbjct:   548 AAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAGKSGLTPLHVAAH 607

Query:   618 YDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTP 677
             YD+Q VALLLLD+GASPHA AKNGYTPLHIAAKKNQMDIATTLLEY A  NA ++ G   
Sbjct:   608 YDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIAS 667

Query:   678 LHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVT 737
             +HL+AQEGH DM SLL+   A V+   K+GLTPLHL AQED+VNVA + +  GA +D  T
Sbjct:   668 VHLAAQEGHVDMVSLLLGRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGANVDAQT 727

Query:   738 KAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
             K G+TPLH+  H+G + +V +L+++ A VNA T  GYTPLHQA+QQG   II++LL   A
Sbjct:   728 KMGYTPLHVGCHYGNIKIVNFLLQHSAKVNARTKNGYTPLHQAAQQGHTHIINVLLQNNA 787

Query:   798 QPNATT 803
              PN  T
Sbjct:   788 SPNELT 793

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NNX6 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1387 (493.3 bits), Expect = 7.8e-142, P = 7.8e-142
 Identities = 315/772 (40%), Positives = 455/772 (58%)

Query:    73 GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
             G  E A   + +G  IN+ + NG   L++A++E H  VV  L+ +G +   AT+   T L
Sbjct:    10 GNLEKALDYLKSGVDINISNQNGLNALHLASKEGHVEVVSELIQRGASVDAATKKGNTAL 69

Query:   133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
             H+A   G+  +V++L++  AN+ A++++G TPL+ AA+  H  V+  L++ GA+    T+
Sbjct:    70 HIASLAGQAEVVKVLVTNRANVNAQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATE 129

Query:   193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
             +G  PL +A Q  H+    +L+ +    D      L ALH+A+     + A  LL    +
Sbjct:   130 DGFTPLAVALQQGHDQVVSLLLEN----DTKGKVRLPALHIAARKDDTKAAALLLQNDHN 185

Query:   253 PNARALNGFTPLHIACKK----------NR---------------YKSSHCNHVWVAKTL 287
              +  + +GFTPLHIA             NR               + +S   +  + K L
Sbjct:   186 ADVESKSGFTPLHIAAHYGNINVATLLLNRGAAVDFTARNDITPLHVASKRGNANMVKLL 245

Query:   288 LDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCM 347
             LDR A  +A+  +G TPLH   +    +VVE+LL  GA I + T++GL+PLH+A+    +
Sbjct:   246 LDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHL 305

Query:   348 NIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVA 407
             N    L+Q     D  T    T LH+AA      + ++LL   A+ +A+A          
Sbjct:   306 NCVQLLIQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKA---------- 355

Query:   408 SRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVAS 467
                             + G TPLH+A + N+  ++ +LL++GAS+ A      TP+HVA+
Sbjct:   356 ----------------LNGFTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVAA 399

Query:   468 RLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFT 527
              +G+ +I S L+ HGAS +     G TALH++A+ GQ EV   L ++GA + A  K   T
Sbjct:   400 FMGHVNIVSQLMHHGASPNTTNVRGETALHMAARAGQTEVVRYLVQNGAQVEAKAKDDQT 459

Query:   528 PLHLAAKYGRMKIAQMLLQKDA-----------PVDSQGK-----VASILTESGASITAT 571
             PLH++A+ G+  I Q LLQ+ A           P+    +     VAS+L E GAS+   
Sbjct:   460 PLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVASVLLEHGASLAII 519

Query:   572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRG 631
             TKKGFTPLH+AAKYG++++A +LLQK+A  D+ GK+G+TPLHVA+HYD+Q VALLLLD+G
Sbjct:   520 TKKGFTPLHVAAKYGKIEVANLLLQKNASPDASGKSGLTPLHVAAHYDNQKVALLLLDQG 579

Query:   632 ASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSS 691
             ASPHA AKNGYTPLHIAAKKNQMDIATTLLEY A  NA ++ G  P+HL++Q+GH DM S
Sbjct:   580 ASPHASAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIAPVHLASQDGHVDMVS 639

Query:   692 LLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG 751
             LL+   A V+   K+GLTPLHL AQED+VNVA + +  GA +D  TK G+TPLH+  H+G
Sbjct:   640 LLLTRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAAVDAQTKMGYTPLHVGCHYG 699

Query:   752 QLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
              + +V +L+++ A +NA T  GYTPLHQA+QQG   II++LL  GA PN  T
Sbjct:   700 NIKIVNFLLQHSAKINAKTKNGYTPLHQAAQQGHTHIINVLLQHGAAPNELT 751

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NJ80 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1387 (493.3 bits), Expect = 7.8e-142, P = 7.8e-142
 Identities = 315/772 (40%), Positives = 455/772 (58%)

Query:    73 GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
             G  E A   + +G  IN+ + NG   L++A++E H  VV  L+ +G +   AT+   T L
Sbjct:    10 GNLEKALDYLKSGVDINISNQNGLNALHLASKEGHVEVVSELIQRGASVDAATKKGNTAL 69

Query:   133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
             H+A   G+  +V++L++  AN+ A++++G TPL+ AA+  H  V+  L++ GA+    T+
Sbjct:    70 HIASLAGQAEVVKVLVTNRANVNAQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATE 129

Query:   193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
             +G  PL +A Q  H+    +L+ +    D      L ALH+A+     + A  LL    +
Sbjct:   130 DGFTPLAVALQQGHDQVVSLLLEN----DTKGKVRLPALHIAARKDDTKAAALLLQNDHN 185

Query:   253 PNARALNGFTPLHIACKK----------NR---------------YKSSHCNHVWVAKTL 287
              +  + +GFTPLHIA             NR               + +S   +  + K L
Sbjct:   186 ADVESKSGFTPLHIAAHYGNINVATLLLNRGAAVDFTARNDITPLHVASKRGNANMVKLL 245

Query:   288 LDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCM 347
             LDR A  +A+  +G TPLH   +    +VVE+LL  GA I + T++GL+PLH+A+    +
Sbjct:   246 LDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHL 305

Query:   348 NIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVA 407
             N    L+Q     D  T    T LH+AA      + ++LL   A+ +A+A          
Sbjct:   306 NCVQLLIQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKA---------- 355

Query:   408 SRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVAS 467
                             + G TPLH+A + N+  ++ +LL++GAS+ A      TP+HVA+
Sbjct:   356 ----------------LNGFTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVAA 399

Query:   468 RLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFT 527
              +G+ +I S L+ HGAS +     G TALH++A+ GQ EV   L ++GA + A  K   T
Sbjct:   400 FMGHVNIVSQLMHHGASPNTTNVRGETALHMAARAGQTEVVRYLVQNGAQVEAKAKDDQT 459

Query:   528 PLHLAAKYGRMKIAQMLLQKDA-----------PVDSQGK-----VASILTESGASITAT 571
             PLH++A+ G+  I Q LLQ+ A           P+    +     VAS+L E GAS+   
Sbjct:   460 PLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVASVLLEHGASLAII 519

Query:   572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRG 631
             TKKGFTPLH+AAKYG++++A +LLQK+A  D+ GK+G+TPLHVA+HYD+Q VALLLLD+G
Sbjct:   520 TKKGFTPLHVAAKYGKIEVANLLLQKNASPDASGKSGLTPLHVAAHYDNQKVALLLLDQG 579

Query:   632 ASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSS 691
             ASPHA AKNGYTPLHIAAKKNQMDIATTLLEY A  NA ++ G  P+HL++Q+GH DM S
Sbjct:   580 ASPHASAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIAPVHLASQDGHVDMVS 639

Query:   692 LLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG 751
             LL+   A V+   K+GLTPLHL AQED+VNVA + +  GA +D  TK G+TPLH+  H+G
Sbjct:   640 LLLTRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAAVDAQTKMGYTPLHVGCHYG 699

Query:   752 QLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
              + +V +L+++ A +NA T  GYTPLHQA+QQG   II++LL  GA PN  T
Sbjct:   700 NIKIVNFLLQHSAKINAKTKNGYTPLHQAAQQGHTHIINVLLQHGAAPNELT 751

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NNX8 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1387 (493.3 bits), Expect = 7.8e-142, P = 7.8e-142
 Identities = 315/772 (40%), Positives = 455/772 (58%)

Query:    73 GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
             G  E A   + +G  IN+ + NG   L++A++E H  VV  L+ +G +   AT+   T L
Sbjct:    10 GNLEKALDYLKSGVDINISNQNGLNALHLASKEGHVEVVSELIQRGASVDAATKKGNTAL 69

Query:   133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
             H+A   G+  +V++L++  AN+ A++++G TPL+ AA+  H  V+  L++ GA+    T+
Sbjct:    70 HIASLAGQAEVVKVLVTNRANVNAQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATE 129

Query:   193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
             +G  PL +A Q  H+    +L+ +    D      L ALH+A+     + A  LL    +
Sbjct:   130 DGFTPLAVALQQGHDQVVSLLLEN----DTKGKVRLPALHIAARKDDTKAAALLLQNDHN 185

Query:   253 PNARALNGFTPLHIACKK----------NR---------------YKSSHCNHVWVAKTL 287
              +  + +GFTPLHIA             NR               + +S   +  + K L
Sbjct:   186 ADVESKSGFTPLHIAAHYGNINVATLLLNRGAAVDFTARNDITPLHVASKRGNANMVKLL 245

Query:   288 LDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCM 347
             LDR A  +A+  +G TPLH   +    +VVE+LL  GA I + T++GL+PLH+A+    +
Sbjct:   246 LDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHL 305

Query:   348 NIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVA 407
             N    L+Q     D  T    T LH+AA      + ++LL   A+ +A+A          
Sbjct:   306 NCVQLLIQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKA---------- 355

Query:   408 SRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVAS 467
                             + G TPLH+A + N+  ++ +LL++GAS+ A      TP+HVA+
Sbjct:   356 ----------------LNGFTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVAA 399

Query:   468 RLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFT 527
              +G+ +I S L+ HGAS +     G TALH++A+ GQ EV   L ++GA + A  K   T
Sbjct:   400 FMGHVNIVSQLMHHGASPNTTNVRGETALHMAARAGQTEVVRYLVQNGAQVEAKAKDDQT 459

Query:   528 PLHLAAKYGRMKIAQMLLQKDA-----------PVDSQGK-----VASILTESGASITAT 571
             PLH++A+ G+  I Q LLQ+ A           P+    +     VAS+L E GAS+   
Sbjct:   460 PLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVASVLLEHGASLAII 519

Query:   572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRG 631
             TKKGFTPLH+AAKYG++++A +LLQK+A  D+ GK+G+TPLHVA+HYD+Q VALLLLD+G
Sbjct:   520 TKKGFTPLHVAAKYGKIEVANLLLQKNASPDASGKSGLTPLHVAAHYDNQKVALLLLDQG 579

Query:   632 ASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSS 691
             ASPHA AKNGYTPLHIAAKKNQMDIATTLLEY A  NA ++ G  P+HL++Q+GH DM S
Sbjct:   580 ASPHASAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIAPVHLASQDGHVDMVS 639

Query:   692 LLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG 751
             LL+   A V+   K+GLTPLHL AQED+VNVA + +  GA +D  TK G+TPLH+  H+G
Sbjct:   640 LLLTRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAAVDAQTKMGYTPLHVGCHYG 699

Query:   752 QLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
              + +V +L+++ A +NA T  GYTPLHQA+QQG   II++LL  GA PN  T
Sbjct:   700 NIKIVNFLLQHSAKINAKTKNGYTPLHQAAQQGHTHIINVLLQHGAAPNELT 751

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1LM13 Ank3 "Protein Ank3" [Rattus norvegicus (taxid:10116)]

 Score = 1387 (493.3 bits), Expect = 7.8e-142, P = 7.8e-142
 Identities = 317/782 (40%), Positives = 456/782 (58%)

Query:    61 EVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGN 120
             + + S  +    G  E A   + NG  +N+ + NG   L++A++E H  VV  LL +  N
Sbjct:     2 DANASYLRAARAGHLEKALDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREAN 61

Query:   121 QTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDIL 180
                AT+   T LH+A   G+  +V++L++ GAN+ A++++G TPL+ AA+  H  V+  L
Sbjct:    62 VDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFL 121

Query:   181 IEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHV 240
             ++ GA+    T++G  PL +A Q  H+    +L+ +    D      L ALH+A+     
Sbjct:   122 LDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLEN----DTKGKVRLPALHIAARKDDT 177

Query:   241 RVAKTLLDRKADPNARALNGFTPLHIACKK----------NR------------YKSSHC 278
             + A  LL    + +  + +GFTPLHIA             NR            ++S+  
Sbjct:   178 KAAALLLQNDTNADIESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARVSTWQSAES 237

Query:   279 NHVW-VAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTP 337
               +  + K LLDR A  +A+  +G TPLH   +    +VVE+LL   A I + T++GL+P
Sbjct:   238 QGISNMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGLSP 297

Query:   338 LHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARA 397
             LH+A+    +N    LLQ     D  T    T LH+AA      + ++LL   A+ +A+A
Sbjct:   298 LHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKA 357

Query:   398 REDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAR 457
                                       + G TPLH+A + N+  ++ +LL++GAS+ A   
Sbjct:   358 --------------------------LNGFTPLHIACKKNRIRVMELLLKHGASIQAVTE 391

Query:   458 EDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGAS 517
                TP+HVA+ +G+ +I S L+ HGAS +     G TALH++A+ GQ EV   L + GA 
Sbjct:   392 SGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQ 451

Query:   518 ITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA-----------PVDSQGK-----VASIL 561
             + A  K   TPLH++A+ G+  I Q LLQ+ A           P+    +     VA+ L
Sbjct:   452 VEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVAAFL 511

Query:   562 TESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQ 621
              + GAS++ TTKKGFTPLH+AAKYG++++A +LLQK A  D+ GK+G+TPLHVA+HYD+Q
Sbjct:   512 LDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQ 571

Query:   622 NVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLS 681
              VALLLLD+GASPHA AKNGYTPLHIAAKKNQMDIAT+LLEY A  NA ++ G   +HL+
Sbjct:   572 KVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLA 631

Query:   682 AQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGF 741
             AQEGH DM SLL+   A V+   K+GLTPLHL AQED+VNVA + +  GA +D  TK G+
Sbjct:   632 AQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGY 691

Query:   742 TPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA 801
             TPLH+  H+G + +V +L+++ A VNA T  GYTPLHQA+QQG   II++LL   A PN 
Sbjct:   692 TPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTPLHQAAQQGHTHIINVLLQNNASPNE 751

Query:   802 TT 803
              T
Sbjct:   752 LT 753

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1NNX7 ANK3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1387 (493.3 bits), Expect = 7.9e-142, P = 7.9e-142
 Identities = 315/772 (40%), Positives = 455/772 (58%)

Query:    73 GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
             G  E A   + +G  IN+ + NG   L++A++E H  VV  L+ +G +   AT+   T L
Sbjct:    10 GNLEKALDYLKSGVDINISNQNGLNALHLASKEGHVEVVSELIQRGASVDAATKKGNTAL 69

Query:   133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
             H+A   G+  +V++L++  AN+ A++++G TPL+ AA+  H  V+  L++ GA+    T+
Sbjct:    70 HIASLAGQAEVVKVLVTNRANVNAQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATE 129

Query:   193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
             +G  PL +A Q  H+    +L+ +    D      L ALH+A+     + A  LL    +
Sbjct:   130 DGFTPLAVALQQGHDQVVSLLLEN----DTKGKVRLPALHIAARKDDTKAAALLLQNDHN 185

Query:   253 PNARALNGFTPLHIACKK----------NR---------------YKSSHCNHVWVAKTL 287
              +  + +GFTPLHIA             NR               + +S   +  + K L
Sbjct:   186 ADVESKSGFTPLHIAAHYGNINVATLLLNRGAAVDFTARNDITPLHVASKRGNANMVKLL 245

Query:   288 LDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCM 347
             LDR A  +A+  +G TPLH   +    +VVE+LL  GA I + T++GL+PLH+A+    +
Sbjct:   246 LDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHL 305

Query:   348 NIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVA 407
             N    L+Q     D  T    T LH+AA      + ++LL   A+ +A+A          
Sbjct:   306 NCVQLLIQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKA---------- 355

Query:   408 SRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVAS 467
                             + G TPLH+A + N+  ++ +LL++GAS+ A      TP+HVA+
Sbjct:   356 ----------------LNGFTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVAA 399

Query:   468 RLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFT 527
              +G+ +I S L+ HGAS +     G TALH++A+ GQ EV   L ++GA + A  K   T
Sbjct:   400 FMGHVNIVSQLMHHGASPNTTNVRGETALHMAARAGQTEVVRYLVQNGAQVEAKAKDDQT 459

Query:   528 PLHLAAKYGRMKIAQMLLQKDA-----------PVDSQGK-----VASILTESGASITAT 571
             PLH++A+ G+  I Q LLQ+ A           P+    +     VAS+L E GAS+   
Sbjct:   460 PLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVASVLLEHGASLAII 519

Query:   572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRG 631
             TKKGFTPLH+AAKYG++++A +LLQK+A  D+ GK+G+TPLHVA+HYD+Q VALLLLD+G
Sbjct:   520 TKKGFTPLHVAAKYGKIEVANLLLQKNASPDASGKSGLTPLHVAAHYDNQKVALLLLDQG 579

Query:   632 ASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSS 691
             ASPHA AKNGYTPLHIAAKKNQMDIATTLLEY A  NA ++ G  P+HL++Q+GH DM S
Sbjct:   580 ASPHASAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIAPVHLASQDGHVDMVS 639

Query:   692 LLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG 751
             LL+   A V+   K+GLTPLHL AQED+VNVA + +  GA +D  TK G+TPLH+  H+G
Sbjct:   640 LLLTRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAAVDAQTKMGYTPLHVGCHYG 699

Query:   752 QLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
              + +V +L+++ A +NA T  GYTPLHQA+QQG   II++LL  GA PN  T
Sbjct:   700 NIKIVNFLLQHSAKINAKTKNGYTPLHQAAQQGHTHIINVLLQHGAAPNELT 751

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1LPH6 Ank3 "Protein Ank3" [Rattus norvegicus (taxid:10116)]

 Score = 1387 (493.3 bits), Expect = 1.9e-141, P = 1.9e-141
 Identities = 317/782 (40%), Positives = 456/782 (58%)

Query:    61 EVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGN 120
             + + S  +    G  E A   + NG  +N+ + NG   L++A++E H  VV  LL +  N
Sbjct:     2 DANASYLRAARAGHLEKALDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREAN 61

Query:   121 QTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDIL 180
                AT+   T LH+A   G+  +V++L++ GAN+ A++++G TPL+ AA+  H  V+  L
Sbjct:    62 VDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVRFL 121

Query:   181 IEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHV 240
             ++ GA+    T++G  PL +A Q  H+    +L+ +    D      L ALH+A+     
Sbjct:   122 LDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLEN----DTKGKVRLPALHIAARKDDT 177

Query:   241 RVAKTLLDRKADPNARALNGFTPLHIACKK----------NR------------YKSSHC 278
             + A  LL    + +  + +GFTPLHIA             NR            ++S+  
Sbjct:   178 KAAALLLQNDTNADIESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARVSTWQSAES 237

Query:   279 NHVW-VAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTP 337
               +  + K LLDR A  +A+  +G TPLH   +    +VVE+LL   A I + T++GL+P
Sbjct:   238 QGISNMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGLSP 297

Query:   338 LHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARA 397
             LH+A+    +N    LLQ     D  T    T LH+AA      + ++LL   A+ +A+A
Sbjct:   298 LHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKA 357

Query:   398 REDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAR 457
                                       + G TPLH+A + N+  ++ +LL++GAS+ A   
Sbjct:   358 --------------------------LNGFTPLHIACKKNRIRVMELLLKHGASIQAVTE 391

Query:   458 EDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGAS 517
                TP+HVA+ +G+ +I S L+ HGAS +     G TALH++A+ GQ EV   L + GA 
Sbjct:   392 SGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQ 451

Query:   518 ITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA-----------PVDSQGK-----VASIL 561
             + A  K   TPLH++A+ G+  I Q LLQ+ A           P+    +     VA+ L
Sbjct:   452 VEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVAAFL 511

Query:   562 TESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQ 621
              + GAS++ TTKKGFTPLH+AAKYG++++A +LLQK A  D+ GK+G+TPLHVA+HYD+Q
Sbjct:   512 LDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQ 571

Query:   622 NVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLS 681
              VALLLLD+GASPHA AKNGYTPLHIAAKKNQMDIAT+LLEY A  NA ++ G   +HL+
Sbjct:   572 KVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLA 631

Query:   682 AQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGF 741
             AQEGH DM SLL+   A V+   K+GLTPLHL AQED+VNVA + +  GA +D  TK G+
Sbjct:   632 AQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGY 691

Query:   742 TPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA 801
             TPLH+  H+G + +V +L+++ A VNA T  GYTPLHQA+QQG   II++LL   A PN 
Sbjct:   692 TPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTPLHQAAQQGHTHIINVLLQNNASPNE 751

Query:   802 TT 803
              T
Sbjct:   752 LT 753

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|K7GLA8 ANK3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 1383 (491.9 bits), Expect = 2.1e-141, P = 2.1e-141
 Identities = 318/784 (40%), Positives = 455/784 (58%)

Query:    61 EVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGN 120
             + + S  +    G  E A   + NG  IN+ + NG   L++A++E H  VV  LL +  +
Sbjct:     2 DANASYLRAARAGHLEKALDYIKNGVDINICNQNGLNALHLASKEGHVEVVSELLQREAS 61

Query:   121 QTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDIL 180
                AT+   T LH+A   G+  +V++L++ GAN+ A++++G TPL+ AA+  H  V+  L
Sbjct:    62 VDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVKFL 121

Query:   181 IEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHV 240
             ++ GA+    T++G  PL +A Q  H+    +L+ +    D      L ALH+A+     
Sbjct:   122 LDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLEN----DTKGKVRLPALHIAARKDDT 177

Query:   241 RVAKTLLDRKADPNARALNGFTPLHIACKK----------NR---------------YKS 275
             + A  LL    + +  + +GFTPLHIA             NR               + +
Sbjct:   178 KAAALLLQNDNNADVESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVA 237

Query:   276 SHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGL 335
             S   +  + K LLDR A  +A+  +G TPLH   +    +VVE+LL   A I + T++GL
Sbjct:   238 SKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGL 297

Query:   336 TPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDA 395
             +PLH+A+    +N    LLQ     D  T    T LH+AA      + ++LL   A+ +A
Sbjct:   298 SPLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNA 357

Query:   396 RAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDAR 455
             +A                          + G TPLH+A + N+  ++ +LL++GAS+ A 
Sbjct:   358 KA--------------------------LNGFTPLHIACKKNRIKVMELLLKHGASIQAV 391

Query:   456 AREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESG 515
                  TP+HVA+ +G+ +I S L+ HGAS +     G TALH++A+ GQ EV   L + G
Sbjct:   392 TESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDG 451

Query:   516 ASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA-----------PVDSQGK-----VAS 559
             A + A  K   TPLH++A+ G+  I Q LLQ+ A           P+    +     VA+
Sbjct:   452 AQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVAA 511

Query:   560 ILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYD 619
              L + GAS++ TTKKGFTPLH+AAKYG++++A +LLQK A  D+ GK+G+TPLHVA+HYD
Sbjct:   512 FLLDHGASLSITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAGKSGLTPLHVAAHYD 571

Query:   620 HQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLH 679
             +Q VALLLLD+GASPHA AKNGYTPLHIAAKKNQMDIATTLLEY A  NA ++ G   +H
Sbjct:   572 NQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIASVH 631

Query:   680 LSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKA 739
             L+AQEGH DM SLL+   A V+   K+GLTPLHL AQED+VNVA + +  GA +D  TK 
Sbjct:   632 LAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKM 691

Query:   740 GFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP 799
             G+TPLH+  H+G + +V +L+++ A VNA T  GYTPLHQA+QQG   II++LL   A P
Sbjct:   692 GYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTPLHQAAQQGHTHIINVLLQNDASP 751

Query:   800 NATT 803
             N  T
Sbjct:   752 NELT 755

GO:0007165 "signal transduction" evidence=IEA

MGI|MGI:88026 Ank3 "ankyrin 3, epithelial" [Mus musculus (taxid:10090)]

 Score = 1382 (491.5 bits), Expect = 6.9e-141, P = 6.9e-141
 Identities = 318/786 (40%), Positives = 455/786 (57%)

Query:    59 KLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKG 118
             K + + S  +    G  E A   + NG  +N+ + NG   L++A++E H  VV  LL + 
Sbjct:    21 KSDANASYLRAARAGHLEKALDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQRE 80

Query:   119 GNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVID 178
              N   AT+   T LH+A   G+  +V++L++ GAN+ A++++G TPL+ AA+  H  V+ 
Sbjct:    81 ANVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVR 140

Query:   179 ILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCG 238
              L++ GA+    T++G  PL +A Q  H+    +L+ +    D      L ALH+A+   
Sbjct:   141 FLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLEN----DTKGKVRLPALHIAARKD 196

Query:   239 HVRVAKTLLDRKADPNARALNGFTPLHIACKK----------NR---------------Y 273
               + A  LL    + +  + +GFTPLHIA             NR               +
Sbjct:   197 DTKAAALLLQNDTNADVESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLH 256

Query:   274 KSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTES 333
              +S   +  + K LLDR A  +A+  +G TPLH   +    +VVE+LL   A I + T++
Sbjct:   257 VASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRSAPILSKTKN 316

Query:   334 GLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASV 393
             GL+PLH+A+    +N    LLQ     D  T    T LH+AA      + ++LL   AS 
Sbjct:   317 GLSPLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKASP 376

Query:   394 DARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVD 453
             +A+A                          + G TPLH+A + N+  ++ +LL++GAS+ 
Sbjct:   377 NAKA--------------------------LNGFTPLHIACKKNRIRVMELLLKHGASIQ 410

Query:   454 ARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTE 513
             A      TP+HVA+ +G+ +I S L+ HGAS +     G TALH++A+ GQ EV   L +
Sbjct:   411 AVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQ 470

Query:   514 SGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA-----------PV-----DSQGKV 557
              GA + A  K   TPLH++A+ G+  I Q LLQ+ A           P+     +    V
Sbjct:   471 DGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDV 530

Query:   558 ASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASH 617
             A+ L + GAS++ TTKKGFTPLH+AAKYG++++A +LLQK A  D+ GK+G+TPLHVA+H
Sbjct:   531 AAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAH 590

Query:   618 YDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTP 677
             YD+Q VALLLLD+GASPHA AKNGYTPLHIAAKKNQMDIAT+LLEY A  NA ++ G   
Sbjct:   591 YDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIAS 650

Query:   678 LHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVT 737
             +HL+AQEGH DM SLL+   A V+   K+GLTPLHL AQED+VNVA + +  GA +D  T
Sbjct:   651 VHLAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQT 710

Query:   738 KAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
             K G+TPLH+  H+G + +V +L+++ A VNA T  GYT LHQA+QQG   II++LL   A
Sbjct:   711 KMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIINVLLQNNA 770

Query:   798 QPNATT 803
              PN  T
Sbjct:   771 SPNELT 776

GO:0000281 "cytokinesis after mitosis" evidence=ISO

GO:0005200 "structural constituent of cytoskeleton" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0007009 "plasma membrane organization" evidence=ISO

GO:0007165 "signal transduction" evidence=IEA

GO:0007409 "axonogenesis" evidence=IMP

GO:0007411 "axon guidance" evidence=IMP

GO:0010650 "positive regulation of cell communication by electrical coupling" evidence=ISO

GO:0014704 "intercalated disc" evidence=ISO;IDA

GO:0016020 "membrane" evidence=IDA

GO:0016323 "basolateral plasma membrane" evidence=ISO

GO:0016328 "lateral plasma membrane" evidence=ISO

GO:0016529 "sarcoplasmic reticulum" evidence=ISO

GO:0019228 "regulation of action potential in neuron" evidence=IMP

GO:0030018 "Z disc" evidence=ISO

GO:0030054 "cell junction" evidence=IEA

GO:0030424 "axon" evidence=IDA

GO:0030425 "dendrite" evidence=ISO

GO:0031594 "neuromuscular junction" evidence=ISO

GO:0033268 "node of Ranvier" evidence=ISO;IDA

GO:0033270 "paranode region of axon" evidence=IDA

GO:0034112 "positive regulation of homotypic cell-cell adhesion" evidence=ISO

GO:0042383 "sarcolemma" evidence=ISO

GO:0043001 "Golgi to plasma membrane protein transport" evidence=ISO

GO:0043005 "neuron projection" evidence=ISO

GO:0043194 "axon initial segment" evidence=ISO;IDA

GO:0045184 "establishment of protein localization" evidence=ISO

GO:0045202 "synapse" evidence=IDA

GO:0045211 "postsynaptic membrane" evidence=ISO

GO:0045760 "positive regulation of action potential" evidence=TAS

GO:0050808 "synapse organization" evidence=IMP

GO:0071709 "membrane assembly" evidence=ISO

GO:0072659 "protein localization to plasma membrane" evidence=ISO;IDA;IMP

GO:0072660 "maintenance of protein location in plasma membrane" evidence=ISO

GO:0072661 "protein targeting to plasma membrane" evidence=ISO;IMP

GO:0090314 "positive regulation of protein targeting to membrane" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	838
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	2e-36
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-36
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	1e-35
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-35
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	3e-35
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-35
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	5e-34
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	6e-34
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-33
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-33
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-33
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-33
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-33
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-32
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	6e-32
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-31
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	2e-31
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	8e-31
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-30
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	5e-29
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	1e-28
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	1e-28
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	2e-28
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	9e-28
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	1e-27
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	4e-27
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	2e-26
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	1e-25
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	2e-25
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	1e-23
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-23
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	2e-23
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	2e-22
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	3e-22
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	1e-21
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	1e-21
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-21
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	3e-21
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	3e-21
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-21
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-21
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	7e-21
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	8e-21
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	2e-20
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-20
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-20
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-20
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	5e-20
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	6e-20
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	6e-20
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	9e-20
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	2e-19
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-19
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	3e-19
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	1e-18
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	1e-18
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-18
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-18
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-18
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-18
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	1e-17
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	1e-17
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-17
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-17
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-17
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-17
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-17
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-17
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	3e-17
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	3e-17
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	6e-17
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-16
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	4e-16
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	5e-16
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	6e-16
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-15
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	3e-15
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	3e-15
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	4e-15
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-14
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	2e-14
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	3e-14
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	5e-14
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	3e-13
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-12
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	1e-11
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	4e-11
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	5e-11
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	6e-11
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-10
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-10
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	7e-10
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	1e-09
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	1e-09
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	1e-09
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	2e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-09
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	4e-09
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	4e-09
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	5e-09
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	5e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	6e-09
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	1e-08
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-08
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	2e-08
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	2e-08
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	3e-08
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	4e-08
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	5e-08
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	5e-08
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	8e-08
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-07
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	1e-07
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	1e-07
pfam00023	33	pfam00023, Ank, Ankyrin repeat	1e-07
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	2e-07
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	2e-07
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	2e-07
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	2e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-07
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	3e-07
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	3e-07
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	3e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	3e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	3e-07
pfam00023	33	pfam00023, Ank, Ankyrin repeat	3e-07
pfam00023	33	pfam00023, Ank, Ankyrin repeat	3e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-07
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	4e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	5e-07
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	6e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	6e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	7e-07
pfam00023	33	pfam00023, Ank, Ankyrin repeat	7e-07
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	1e-06
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	1e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-06
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	1e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-06
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	2e-06
PHA02884	300	PHA02884, PHA02884, ankyrin repeat protein; Provis	2e-06
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	3e-06
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	3e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-06
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	4e-06
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	4e-06
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	4e-06
pfam00023	33	pfam00023, Ank, Ankyrin repeat	5e-06
PHA02859	209	PHA02859, PHA02859, ankyrin repeat protein; Provis	5e-06
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	7e-06
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	7e-06
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	8e-06
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	1e-05
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	1e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	1e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	1e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	1e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	1e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	1e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	1e-05
PHA02859	209	PHA02859, PHA02859, ankyrin repeat protein; Provis	1e-05
PHA02859	209	PHA02859, PHA02859, ankyrin repeat protein; Provis	1e-05
PHA02859	209	PHA02859, PHA02859, ankyrin repeat protein; Provis	1e-05
smart00248	30	smart00248, ANK, ankyrin repeats	1e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-05
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	3e-05
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	3e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	3e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	3e-05
smart00248	30	smart00248, ANK, ankyrin repeats	3e-05
PHA02736	154	PHA02736, PHA02736, Viral ankyrin protein; Provisi	3e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	4e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	4e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	5e-05
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	5e-05
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	5e-05
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	6e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	6e-05
PHA02859	209	PHA02859, PHA02859, ankyrin repeat protein; Provis	6e-05
PHA02795	437	PHA02795, PHA02795, ankyrin-like protein; Provisio	6e-05
PHA02736	154	PHA02736, PHA02736, Viral ankyrin protein; Provisi	8e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	1e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	1e-04
PHA02884	300	PHA02884, PHA02884, ankyrin repeat protein; Provis	1e-04
PHA02859	209	PHA02859, PHA02859, ankyrin repeat protein; Provis	1e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-04
smart00248	30	smart00248, ANK, ankyrin repeats	2e-04
smart00248	30	smart00248, ANK, ankyrin repeats	2e-04
smart00248	30	smart00248, ANK, ankyrin repeats	2e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	2e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	2e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	2e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	3e-04
PHA02884	300	PHA02884, PHA02884, ankyrin repeat protein; Provis	3e-04
smart00248	30	smart00248, ANK, ankyrin repeats	5e-04
smart00248	30	smart00248, ANK, ankyrin repeats	6e-04
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	7e-04
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	7e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	7e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	8e-04
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	0.001
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	0.001
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.001
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.001
PHA02736	154	PHA02736, PHA02736, Viral ankyrin protein; Provisi	0.001
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	0.001
PHA02716	764	PHA02716, PHA02716, CPXV016; CPX019; EVM010; Provi	0.001
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	0.002
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	0.002
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	0.002
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.002
PHA02884	300	PHA02884, PHA02884, ankyrin repeat protein; Provis	0.002
PHA02859	209	PHA02859, PHA02859, ankyrin repeat protein; Provis	0.002
smart00248	30	smart00248, ANK, ankyrin repeats	0.002
smart00248	30	smart00248, ANK, ankyrin repeats	0.002
smart00248	30	smart00248, ANK, ankyrin repeats	0.002
PHA02716	764	PHA02716, PHA02716, CPXV016; CPX019; EVM010; Provi	0.002
PHA02741	169	PHA02741, PHA02741, hypothetical protein; Provisio	0.002
PHA02917	661	PHA02917, PHA02917, ankyrin-like protein; Provisio	0.002
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	0.003
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	0.004
PHA02859	209	PHA02859, PHA02859, ankyrin repeat protein; Provis	0.004
smart00248	30	smart00248, ANK, ankyrin repeats	0.004
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	0.004
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	0.004

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score =  143 bits (362), Expect = 2e-36
 Identities = 114/405 (28%), Positives = 165/405 (40%), Gaps = 84/405 (20%)

Query: 100 YMAAQENHD-GVVRYLLSKGGNQTLATEHNITPLHV--ACKWGKVA-MVELLISKGANIE 155
           Y+    N     VR LL+ G +     E+  TPLH+       KV  +V LL+  GA++ 
Sbjct: 18  YLLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVN 77

Query: 156 AKTRDGLTPLHCAARSGHD-NVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLI 214
           A  R G TPLH    +    +VI +LI+ GA + +K K G  PLH+              
Sbjct: 78  APERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHV-------------- 123

Query: 215 YHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYK 274
                       YL+  ++     + +V + LL + AD NA  L G TPL +  K     
Sbjct: 124 ------------YLSGFNI-----NPKVIRLLLRKGADVNALDLYGMTPLAVLLK----- 161

Query: 275 SSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACK--KNRYKVVELLLKYGASIAATTE 332
           S + N V + + L+D  AD  A      + LH   +  K R ++V  L++ G   AAT  
Sbjct: 162 SRNAN-VELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDM 220

Query: 333 SGLTPLHV-ASFMGCMNIAIF-LLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNG 390
            G TPLH  A+   C    +  LL AG + +     G+TPLH AA  N     R L+  G
Sbjct: 221 LGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALG 280

Query: 391 ASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGA 450
           A ++A + +                          G TPL L  R N    VR  L    
Sbjct: 281 ADINAVSSD--------------------------GNTPLSLMVRNNNGRAVRAALAKNP 314

Query: 451 SVDARAREDQTPLHVASRLGNGD--------IASLLLQHGASVDA 487
           S +  A      L+ AS  G           +A ++L+   S+  
Sbjct: 315 SAETVAAT----LNTASVAGGDIPSDATRLCVAKVVLRGAFSLLP 355

Length = 471

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  132 bits (334), Expect = 3e-36
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
           G TPLHLAA     ++V++LL NGA V+A+  + +TPLH+A++ G+ +I  LLL+ GA V
Sbjct: 7   GRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADV 66

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           +A  KDG T LH++A+ G  +V  +L + GA + A  K G TPLHLAAK G +++ ++LL
Sbjct: 67  NARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score =  140 bits (354), Expect = 1e-35
 Identities = 79/264 (29%), Positives = 113/264 (42%), Gaps = 37/264 (14%)

Query: 573 KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDH-----QNVALLL 627
           KK   PL+LA +   + + ++LL   A ++S  KN  TPLH  S+  +     + +  LL
Sbjct: 33  KKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLL 92

Query: 628 LDRGASPHAVAKNGYTPLHIAA--KKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEG 685
           L+ GA+ +A   NG TPL  A   K N   I   LL+  A  N ++  G   LHL  +  
Sbjct: 93  LEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESN 152

Query: 686 HTD--MSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVAT-ITMF--NGAEIDPVTKAG 740
             D  +  LLI+ G                      +N    +      G  I+     G
Sbjct: 153 KIDLKILKLLIDKGV--------------------DINAKNRVNYLLSYGVPINIKDVYG 192

Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
           FTPLH A +      V+YL++ GAN N     G TPLH A       I  LLL  G  P+
Sbjct: 193 FTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNG--PS 250

Query: 801 ATTNLFCCATILVKNGAEIDPVTK 824
             T      T+L     +++ +TK
Sbjct: 251 IKT---IIETLLYFKDKDLNTITK 271

Length = 422

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  129 bits (327), Expect = 2e-35
 Identities = 53/125 (42%), Positives = 82/125 (65%)

Query: 570 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLD 629
           A  + G TPLHLAA  G +++ ++LL+  A V+++  +G TPLH+A+   H  +  LLL+
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLE 61

Query: 630 RGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDM 689
           +GA  +A  K+G TPLH+AA+   +D+   LL++ A  NA  K G TPLHL+A+ GH ++
Sbjct: 62  KGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEV 121

Query: 690 SSLLI 694
             LL+
Sbjct: 122 VKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score =  142 bits (360), Expect = 3e-35
 Identities = 118/386 (30%), Positives = 183/386 (47%), Gaps = 43/386 (11%)

Query: 104 QENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLT 163
           Q++   +   LL  G +      + ITP+H A + G   MV LL+S GA++     D L+
Sbjct: 154 QQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLS 213

Query: 164 PLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYH-GAGVDE 222
            L CA  S + + I  +I+  + +    KN L+ L      D E  T +L+Y  G  V+ 
Sbjct: 214 VLECAVDSKNIDTIKAIIDNRSNI---NKNDLSLLKAIRNEDLE--TSLLLYDAGFSVNS 268

Query: 223 ITVDYLTALHVASHCGHV-RVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHV 281
           I     T LH AS    + R+   LL+R AD NA+ + G TPL++   KN Y + +    
Sbjct: 269 IDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMA-KNGYDTENI--- 324

Query: 282 WVAKTLLDRKADPNARALNGFTPLHIACKKNRYK-VVELLLKYGASIAATTESGLTPLHV 340
              +TL+   AD NA      TPLH A   +R K +V  LL+ GA++ A      TP+H 
Sbjct: 325 ---RTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHY 381

Query: 341 ASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLA-ARANQTDIVRILLRNGASVDARARE 399
           A+    + I   LL  GA  +  + +  T LH A    N    V+ L+  GA+V+++ ++
Sbjct: 382 AAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKD 441

Query: 400 DQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARARED 459
             TPLH A +                         +  + D++ +LL NGA V+A   ++
Sbjct: 442 LSTPLHYACK-------------------------KNCKLDVIEMLLDNGADVNAINIQN 476

Query: 460 QTPLHVASRLGNGDIASLLLQHGASV 485
           Q PL +A  L    I ++LL +GA +
Sbjct: 477 QYPLLIA--LEYHGIVNILLHYGAEL 500

Length = 682

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  129 bits (326), Expect = 4e-35
 Identities = 54/134 (40%), Positives = 79/134 (58%), Gaps = 8/134 (5%)

Query: 254 NARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNR 313
           NAR  +G TPLH+A            H+ V K LL+  AD NA+  +G TPLH+A K   
Sbjct: 1   NARDEDGRTPLHLAASNG--------HLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGH 52

Query: 314 YKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHL 373
            ++V+LLL+ GA + A  + G TPLH+A+  G +++   LL+ GA  +     G TPLHL
Sbjct: 53  LEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHL 112

Query: 374 AARANQTDIVRILL 387
           AA+    ++V++LL
Sbjct: 113 AAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  126 bits (318), Expect = 5e-34
 Identities = 54/134 (40%), Positives = 77/134 (57%), Gaps = 8/134 (5%)

Query: 221 DEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNH 280
           +    D  T LH+A+  GH+ V K LL+  AD NA+  +G TPLH+A            H
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAA--------KNGH 52

Query: 281 VWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHV 340
           + + K LL++ AD NAR  +G TPLH+A +     VV+LLLK+GA + A  + G TPLH+
Sbjct: 53  LEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHL 112

Query: 341 ASFMGCMNIAIFLL 354
           A+  G + +   LL
Sbjct: 113 AAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  125 bits (317), Expect = 6e-34
 Identities = 49/126 (38%), Positives = 81/126 (64%)

Query: 89  NVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLI 148
           N +  +G TPL++AA   H  VV+ LL  G +         TPLH+A K G + +V+LL+
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 149 SKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEA 208
            KGA++ A+ +DG TPLH AAR+G+ +V+ +L++ GA + ++ K+G  PLH+A++  H  
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLE 120

Query: 209 ATRVLI 214
             ++L+
Sbjct: 121 VVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  125 bits (316), Expect = 1e-33
 Identities = 57/143 (39%), Positives = 85/143 (59%), Gaps = 17/143 (11%)

Query: 453 DARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILT 512
           +AR  + +TPLH+A+  G+ ++  LLL++GA V+A   DG T LH++AK G  E+  +L 
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 513 ESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATT 572
           E GA + A  K G TPLHLAA+ G + + ++LL+                  GA + A  
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKH-----------------GADVNARD 103

Query: 573 KKGFTPLHLAAKYGRMKIAQMLL 595
           K G TPLHLAAK G +++ ++LL
Sbjct: 104 KDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  125 bits (315), Expect = 1e-33
 Identities = 52/115 (45%), Positives = 75/115 (65%)

Query: 295 NARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLL 354
           NAR  +G TPLH+A      +VV+LLL+ GA + A    G TPLH+A+  G + I   LL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 355 QAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR 409
           + GA  +     G TPLHLAAR    D+V++LL++GA V+AR ++ +TPLH+A++
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAK 115

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  124 bits (312), Expect = 3e-33
 Identities = 62/145 (42%), Positives = 84/145 (57%), Gaps = 26/145 (17%)

Query: 367 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRG 426
           G TPLHLAA     ++V++LL NGA V+A+  +                          G
Sbjct: 7   GRTPLHLAASNGHLEVVKLLLENGADVNAKDND--------------------------G 40

Query: 427 ETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVD 486
            TPLHLAA+    +IV++LL  GA V+AR ++  TPLH+A+R GN D+  LLL+HGA V+
Sbjct: 41  RTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVN 100

Query: 487 APTKDGYTALHISAKEGQDEVASIL 511
           A  KDG T LH++AK G  EV  +L
Sbjct: 101 ARDKDGRTPLHLAAKNGHLEVVKLL 125

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  124 bits (312), Expect = 3e-33
 Identities = 54/124 (43%), Positives = 79/124 (63%)

Query: 602 DSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLL 661
           +++ ++G TPLH+A+   H  V  LLL+ GA  +A   +G TPLH+AAK   ++I   LL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 662 EYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVN 721
           E  A  NA  K G TPLHL+A+ G+ D+  LL++HGA V+ + K+G TPLHL A+   + 
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLE 120

Query: 722 VATI 725
           V  +
Sbjct: 121 VVKL 124

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  123 bits (311), Expect = 4e-33
 Identities = 56/142 (39%), Positives = 83/142 (58%), Gaps = 17/142 (11%)

Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPL 579
           A  + G TPLHLAA  G +++ ++LL+                  GA + A    G TPL
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLEN-----------------GADVNAKDNDGRTPL 44

Query: 580 HLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAK 639
           HLAAK G ++I ++LL+K A V+++ K+G TPLH+A+   + +V  LLL  GA  +A  K
Sbjct: 45  HLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDK 104

Query: 640 NGYTPLHIAAKKNQMDIATTLL 661
           +G TPLH+AAK   +++   LL
Sbjct: 105 DGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  121 bits (305), Expect = 3e-32
 Identities = 52/126 (41%), Positives = 83/126 (65%)

Query: 668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM 727
           NA  + G TPLHL+A  GH ++  LL+E+GA V+ +  +G TPLHL A+   + +  + +
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 728 FNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVL 787
             GA+++   K G TPLH+A+  G L++V+ L+++GA+VNA    G TPLH A++ G + 
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLE 120

Query: 788 IIDLLL 793
           ++ LLL
Sbjct: 121 VVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  120 bits (302), Expect = 6e-32
 Identities = 51/122 (41%), Positives = 79/122 (64%)

Query: 126 EHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGA 185
           E   TPLH+A   G + +V+LL+  GA++ AK  DG TPLH AA++GH  ++ +L+EKGA
Sbjct: 5   EDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA 64

Query: 186 ALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKT 245
            + ++ K+G  PLH+A++  +    ++L+ HGA V+    D  T LH+A+  GH+ V K 
Sbjct: 65  DVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKL 124

Query: 246 LL 247
           LL
Sbjct: 125 LL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  119 bits (301), Expect = 1e-31
 Identities = 59/166 (35%), Positives = 80/166 (48%), Gaps = 41/166 (24%)

Query: 156 AKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIY 215
           A+  DG TPLH AA +GH  V+ +L+E GA + +K  +G                     
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDG--------------------- 40

Query: 216 HGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKS 275
                        T LH+A+  GH+ + K LL++ AD NAR  +G TPLH+A +      
Sbjct: 41  ------------RTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLD- 87

Query: 276 SHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLL 321
                  V K LL   AD NAR  +G TPLH+A K    +VV+LLL
Sbjct: 88  -------VVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score =  127 bits (322), Expect = 2e-31
 Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 41/250 (16%)

Query: 428 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLG-----NGDIASLLLQHG 482
            PL+LA  A   D+V+ILL NGA +++  + + TPLH  S +        +I  LLL++G
Sbjct: 37  LPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYG 96

Query: 483 ASVDAPTKDGYTALH--ISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKI 540
           A+V+AP  +G T L   IS K     +   L ++GA++      G   LHL  +  ++ +
Sbjct: 97  ANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDL 156

Query: 541 AQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAP 600
                          K+  +L + G  I A  +                    LL    P
Sbjct: 157 ---------------KILKLLIDKGVDINAKNR-----------------VNYLLSYGVP 184

Query: 601 VDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTL 660
           ++ +   G TPLH A + ++      LLD GA+P+ V K G TPLHIA   N  +I   L
Sbjct: 185 INIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLL 244

Query: 661 LEYNAKPNAE 670
           L  N  P+ +
Sbjct: 245 L--NNGPSIK 252

Length = 422

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  117 bits (294), Expect = 8e-31
 Identities = 51/125 (40%), Positives = 80/125 (64%)

Query: 636 AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIE 695
           A  ++G TPLH+AA    +++   LLE  A  NA+   G TPLHL+A+ GH ++  LL+E
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLE 61

Query: 696 HGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNM 755
            GA V+ + K+G TPLHL A+   ++V  + + +GA+++   K G TPLH+A+  G L +
Sbjct: 62  KGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEV 121

Query: 756 VRYLV 760
           V+ L+
Sbjct: 122 VKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  116 bits (293), Expect = 1e-30
 Identities = 45/109 (41%), Positives = 73/109 (66%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G  EV K+L++NGA +N +  +G TPL++AA+  H  +V+ LL KG +     +   TPL
Sbjct: 18  GHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPL 77

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILI 181
           H+A + G + +V+LL+  GA++ A+ +DG TPLH AA++GH  V+ +L+
Sbjct: 78  HLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score =  120 bits (303), Expect = 5e-29
 Identities = 70/274 (25%), Positives = 115/274 (41%), Gaps = 59/274 (21%)

Query: 127 HNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHD-----NVIDILI 181
             + PL++A +   + +V++L+  GA+I + T++  TPLH  +   ++      ++ +L+
Sbjct: 34  KPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLL 93

Query: 182 EKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVR 241
           E GA + +   NG+ PL  A                               ++       
Sbjct: 94  EYGANVNAPDNNGITPLLYA-------------------------------ISKKSNSYS 122

Query: 242 VAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNG 301
           + + LLD  A+ N +  +G   LH+  + N+          + K L+D+  D NA     
Sbjct: 123 IVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLK------ILKLLIDKGVDINA----- 171

Query: 302 FTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPD 361
                    KNR   V  LL YG  I      G TPLH A +        +LL  GA P+
Sbjct: 172 ---------KNR---VNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPN 219

Query: 362 TATVRGETPLHLAARANQTDIVRILLRNGASVDA 395
                G+TPLH+A   N  +I ++LL NG S+  
Sbjct: 220 LVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 253

Length = 422

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score =  120 bits (302), Expect = 1e-28
 Identities = 93/341 (27%), Positives = 143/341 (41%), Gaps = 34/341 (9%)

Query: 76  EVAKILVDNGATINVQSLNGFTPLYMAAQENHD---GVVRYLLSKGGNQTLATEHNITPL 132
           E  + L+  GA +N +   G TPL++    + +    +VR LL  G +         TPL
Sbjct: 28  EEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPL 87

Query: 133 HV-ACKWGKVAMVELLISKGANIEAKTRDGLTPLH--CAARSGHDNVIDILIEKGAALYS 189
           H+       + +++LLI  GA++ AK + G TPLH   +  + +  VI +L+ KGA + +
Sbjct: 88  HLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNA 147

Query: 190 KTKNGLAPLH--MASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVR----VA 243
               G+ PL   + S+  +    R+LI  GA V  +   + + LH   H    +    + 
Sbjct: 148 LDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLH--HHLQSFKPRARIV 205

Query: 244 KTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFT 303
           + L+    DP A  + G TPLH     +  K S      V   LL      NAR   G T
Sbjct: 206 RELIRAGCDPAATDMLGNTPLHSMATGSSCKRSL-----VLP-LLIAGISINARNRYGQT 259

Query: 304 PLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAP--- 360
           PLH A   N  +    L+  GA I A +  G TPL +       N           P   
Sbjct: 260 PLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLM-VRNN-NGRAVRAALAKNPSAE 317

Query: 361 ------DTATVRGETPLHLAARANQTDIVRILLRNGASVDA 395
                 +TA+V G      A R     + +++LR   S+  
Sbjct: 318 TVAATLNTASVAGGDIPSDATRLC---VAKVVLRGAFSLLP 355

Length = 471

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score =  118 bits (299), Expect = 1e-28
 Identities = 76/262 (29%), Positives = 104/262 (39%), Gaps = 65/262 (24%)

Query: 74  QEEVAKILVDNGATINVQSLNGFTPLYMAAQENHD-----GVVRYLLSKGGNQTLATEHN 128
             +V KIL+DNGA IN  + N  TPL+  +   ++      +V+ LL  G N      + 
Sbjct: 47  NIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNG 106

Query: 129 ITPLHVA--CKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAA 186
           ITPL  A   K    ++VE L+  GAN+  K  DG   LH    S   + + IL      
Sbjct: 107 ITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKID-LKIL------ 159

Query: 187 LYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEIT-VDYLTALHVASHCGHVRVAKT 245
                                   ++LI  G  ++    V+Y                  
Sbjct: 160 ------------------------KLLIDKGVDINAKNRVNY------------------ 177

Query: 246 LLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPL 305
           LL      N + + GFTPLH A           N+    K LLD  A+PN     G TPL
Sbjct: 178 LLSYGVPINIKDVYGFTPLHYAVYN--------NNPEFVKYLLDLGANPNLVNKYGDTPL 229

Query: 306 HIACKKNRYKVVELLLKYGASI 327
           HIA   N  ++ +LLL  G SI
Sbjct: 230 HIAILNNNKEIFKLLLNNGPSI 251

Length = 422

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score =  121 bits (305), Expect = 2e-28
 Identities = 107/359 (29%), Positives = 169/359 (47%), Gaps = 51/359 (14%)

Query: 441 IVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALH--- 497
           I  +LL  GA V+A+     TP+H A+  GN  + +LLL +GA V+    D  + L    
Sbjct: 160 IAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAV 219

Query: 498 -------------------------ISAKEGQD-EVASILTESGASITATTKKGFTPLHL 531
                                    + A   +D E + +L ++G S+ +      TPLH 
Sbjct: 220 DSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHH 279

Query: 532 AAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYG-RMKI 590
           A++              AP  S  ++   L E GA + A   KG TPL+L AK G   + 
Sbjct: 280 ASQ--------------AP--SLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTEN 323

Query: 591 AQMLLQKDAPVDSQGKNGVTPLHVASHYD-HQNVALLLLDRGASPHAVAKNGYTPLHIAA 649
            + L+   A V++  +  +TPLH AS  D ++++ + LL+ GA+ +A      TP+H AA
Sbjct: 324 IRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAA 383

Query: 650 KKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMS-SLLIEHGATVSHQAKNGL 708
            +N + I  TLL+Y A   A S+   T LH +    +  MS   LI+ GA V+ + K+  
Sbjct: 384 VRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLS 443

Query: 709 TPLHL-CAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
           TPLH  C +  K++V  + + NGA+++ +      PL IA       +V  L+  GA +
Sbjct: 444 TPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIA--LEYHGIVNILLHYGAEL 500

Length = 682

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score =  116 bits (293), Expect = 9e-28
 Identities = 73/237 (30%), Positives = 109/237 (45%), Gaps = 31/237 (13%)

Query: 262 TPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRY------K 315
            PL++A +             V K LLD  AD N+   N  TPLH      +Y      +
Sbjct: 37  LPLYLAKEARNID--------VVKILLDNGADINSSTKNNSTPLHYL-SNIKYNLTDVKE 87

Query: 316 VVELLLKYGASIAATTESGLTPLHVASF--MGCMNIAIFLLQAGAAPDTATVRGETPLHL 373
           +V+LLL+YGA++ A   +G+TPL  A        +I  +LL  GA  +     GE  LHL
Sbjct: 88  IVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHL 147

Query: 374 AARANQTD--IVRILLRNGASVDARAREDQTPLHVASRLRRF-SSASQSALTRVRGETPL 430
              +N+ D  I+++L+  G  ++A            +R+    S      +  V G TPL
Sbjct: 148 YLESNKIDLKILKLLIDKGVDINA-----------KNRVNYLLSYGVPINIKDVYGFTPL 196

Query: 431 HLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDA 487
           H A   N  + V+ LL  GA+ +   +   TPLH+A    N +I  LLL +G S+  
Sbjct: 197 HYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 253

Length = 422

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score =  117 bits (295), Expect = 1e-27
 Identities = 91/329 (27%), Positives = 126/329 (38%), Gaps = 54/329 (16%)

Query: 240 VRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARAL 299
           V   + LL   AD N R   G TPLH+    +  K        + + LL+  AD NA   
Sbjct: 27  VEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKD-----IVRLLLEAGADVNAPER 81

Query: 300 NGFTPLHI-ACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGA 358
            GFTPLH+         V++LL+K GA + A  + G TPLHV                  
Sbjct: 82  CGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHV------------------ 123

Query: 359 APDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR--------L 410
                        +L+       ++R+LLR GA V+A      TPL V  +        L
Sbjct: 124 -------------YLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELL 170

Query: 411 RRFSSASQSALTR-VRGETPLH---LAARANQTDIVRILLRNGASVDARAREDQTPLHVA 466
           R    A         R  + LH    + +     IVR L+R G    A      TPLH  
Sbjct: 171 RLLIDAGADVYAVDDRFRSLLHHHLQSFKPR-ARIVRELIRAGCDPAATDMLGNTPLHSM 229

Query: 467 ---SRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTK 523
              S      +  LL+  G S++A  + G T LH +A          L   GA I A + 
Sbjct: 230 ATGSSCKRSLVLPLLI-AGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSS 288

Query: 524 KGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
            G TPL L  +    +  +  L K+   +
Sbjct: 289 DGNTPLSLMVRNNNGRAVRAALAKNPSAE 317

Length = 471

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score =  115 bits (290), Expect = 4e-27
 Identities = 86/345 (24%), Positives = 137/345 (39%), Gaps = 45/345 (13%)

Query: 505 DEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTES 564
           +EV  +L   GA +    + G TPLH            + L   +       +  +L E+
Sbjct: 28  EEVRRLLAA-GADVNFRGEYGKTPLH------------LYLHYSSEKVK--DIVRLLLEA 72

Query: 565 GASITATTKKGFTPLHLAAKYG-RMKIAQMLLQKDAPVDSQGKNGVTPLHV--ASHYDHQ 621
           GA + A  + GFTPLHL       + + ++L++  A V+++ K G TPLHV  +    + 
Sbjct: 73  GADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINP 132

Query: 622 NVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIAT--TLLEYNAKPNAESKAGFTPLH 679
            V  LLL +GA  +A+   G TPL +  K    ++     L++  A   A      + LH
Sbjct: 133 KVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLH 192

Query: 680 LSAQEGHTD--MSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMF--NGAEIDP 735
              Q       +   LI  G   +     G TPLH  A       + +      G  I+ 
Sbjct: 193 HHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINA 252

Query: 736 VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGA 795
             + G TPLH A+ F      R L+  GA++NA ++ G TPL    +      +   L  
Sbjct: 253 RNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAAL-- 310

Query: 796 GAQPNATT-------------------NLFCCATILVKNGAEIDP 821
              P+A T                      C A ++++    + P
Sbjct: 311 AKNPSAETVAATLNTASVAGGDIPSDATRLCVAKVVLRGAFSLLP 355

Length = 471

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score =  115 bits (288), Expect = 2e-26
 Identities = 106/356 (29%), Positives = 166/356 (46%), Gaps = 43/356 (12%)

Query: 203 QGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFT 262
           Q D      +L+  GA V+   +  +T +H A+  G+ ++   LL   AD N  AL+  +
Sbjct: 154 QQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLS 213

Query: 263 PLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLK 322
            L  A       +         K ++D +++ N   L+    L  A +    +   LL  
Sbjct: 214 VLECAVDSKNIDT--------IKAIIDNRSNINKNDLS----LLKAIRNEDLETSLLLYD 261

Query: 323 YGASIAATTESGLTPLHVASFMGCMN-IAIFLLQAGAAPDTATVRGETPLHLAAR-ANQT 380
            G S+ +  +   TPLH AS    ++ +   LL+ GA  +   ++GETPL+L A+    T
Sbjct: 262 AGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDT 321

Query: 381 DIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTD 440
           + +R L+  GA V+A  R   TPLH AS L R                           D
Sbjct: 322 ENIRTLIMLGADVNAADRLYITPLHQASTLDRNK-------------------------D 356

Query: 441 IVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISA 500
           IV  LL  GA+V+AR   D+TP+H A+   N  I + LL +GA ++A ++   TALH  A
Sbjct: 357 IVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHF-A 415

Query: 501 KEGQDEVASI--LTESGASITATTKKGFTPLHLAAKYG-RMKIAQMLLQKDAPVDS 553
             G +   S+  L + GA++ +  K   TPLH A K   ++ + +MLL   A V++
Sbjct: 416 LCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNA 471

Length = 682

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score =  110 bits (277), Expect = 1e-25
 Identities = 84/293 (28%), Positives = 130/293 (44%), Gaps = 21/293 (7%)

Query: 116 SKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDN 175
           +KG    ++ +   TPL  A + G   +VEL I  GA+I         PL  A + G  +
Sbjct: 23  NKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHD 82

Query: 176 VIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVAS 235
           +I +LI+ G          + P+    +       + ++  G  V+    +  T LH A 
Sbjct: 83  IIKLLIDNG------VDTSILPIPCIEK----DMIKTILDCGIDVNIKDAELKTFLHYAI 132

Query: 236 HCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPN 295
             G +   K L +  AD N    NG  P+HIA K N +         + K LL++ A  N
Sbjct: 133 KKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFD--------IIKLLLEKGAYAN 184

Query: 296 ARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQ 355
            +  NG +PLH A +   Y  ++LL+ +G  I    ++G TPLH A        AI LL 
Sbjct: 185 VKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHN--RSAIELLI 242

Query: 356 AGAAPDTATVRGETPLHLAARAN-QTDIVRILLRNGASVDARAREDQTPLHVA 407
             A+ +   + G TPLH A       DI+ ILL + A +  +  + + P+  A
Sbjct: 243 NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTA 295

Length = 434

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score =  110 bits (276), Expect = 2e-25
 Identities = 68/265 (25%), Positives = 109/265 (41%), Gaps = 20/265 (7%)

Query: 75  EEVAKILVDNGATINVQSLNGFTPL--YMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
            +V K+L+  GA +N +   G TPL  Y++    +  V+R LL KG +      + +TPL
Sbjct: 97  LDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPL 156

Query: 133 HVACKWGK--VAMVELLISKGANIEAKTRDGLTPLHCAARSGHDN--VIDILIEKGAALY 188
            V  K     V ++ LLI  GA++ A      + LH   +S      ++  LI  G    
Sbjct: 157 AVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPA 216

Query: 189 SKTKNGLAPLHMASQGDHEAATRV--LIYHGAGVDEITVDYLTALHVASHCGHVRVAKTL 246
           +    G  PLH  + G     + V  L+  G  ++       T LH A+   + R  + L
Sbjct: 217 ATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRL 276

Query: 247 LDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPN--ARALNGFTP 304
           +   AD NA + +G TPL +          + N   V    L +       A  LN  + 
Sbjct: 277 IALGADINAVSSDGNTPLSLMV-------RNNNGRAVR-AALAKNPSAETVAATLNTASV 328

Query: 305 LH--IACKKNRYKVVELLLKYGASI 327
               I     R  V +++L+   S+
Sbjct: 329 AGGDIPSDATRLCVAKVVLRGAFSL 353

Length = 471

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score =  104 bits (261), Expect = 1e-23
 Identities = 70/284 (24%), Positives = 111/284 (39%), Gaps = 52/284 (18%)

Query: 272 RYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATT 331
               S    V   K ++      +        PL++A +     VV++LL  GA I ++T
Sbjct: 6   VLTKSRIIKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSST 65

Query: 332 ESGLTPLH-----VASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAA--RANQTDIVR 384
           ++  TPLH       +      I   LL+ GA  +     G TPL  A   ++N   IV 
Sbjct: 66  KNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVE 125

Query: 385 ILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTD--IV 442
            LL NGA+V+                          +    GE  LHL   +N+ D  I+
Sbjct: 126 YLLDNGANVN--------------------------IKNSDGENLLHLYLESNKIDLKIL 159

Query: 443 RILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKE 502
           ++L+  G  ++A+ R +                  LL +G  ++     G+T LH +   
Sbjct: 160 KLLIDKGVDINAKNRVN-----------------YLLSYGVPINIKDVYGFTPLHYAVYN 202

Query: 503 GQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
              E    L + GA+     K G TPLH+A      +I ++LL 
Sbjct: 203 NNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLN 246

Length = 422

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 96.3 bits (240), Expect = 2e-23
 Identities = 41/103 (39%), Positives = 61/103 (59%)

Query: 702 HQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE 761
            + ++G TPLHL A    + V  + + NGA+++     G TPLH+A+  G L +V+ L+E
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLE 61

Query: 762 NGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
            GA+VNA    G TPLH A++ G + ++ LLL  GA  NA   
Sbjct: 62  KGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDK 104

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score =  104 bits (260), Expect = 2e-23
 Identities = 72/274 (26%), Positives = 110/274 (40%), Gaps = 45/274 (16%)

Query: 231 LHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACK-------------KNRYKSS- 276
           LH A    ++ V K+LL R  + N       TPLHI CK              N+     
Sbjct: 41  LHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFY 100

Query: 277 ---------HCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNR-----YKVVELLLK 322
                    +  +V + K +L  +             L    KK++      ++ +LLL 
Sbjct: 101 TLVAIKDAFNNRNVEIFKIILTNRYKNIQT-----IDLVYIDKKSKDDIIEAEITKLLLS 155

Query: 323 YGASIAATTE-SGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTD 381
           YGA I       G T LH A+      +   LL  GA  +       +PLH A +     
Sbjct: 156 YGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKP 215

Query: 382 IVRILLRNGASVDARAREDQTPLHVA-SRLRRFS--------SASQSALTRVRGETPLHL 432
           IV ILL NGAS DAR +   TPLH++    + +             +A + + G T LH 
Sbjct: 216 IVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHS 275

Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVA 466
           + ++ +   +++LL  GA +++      TPL  A
Sbjct: 276 SIKSER--KLKLLLEYGADINSLNSYKLTPLSSA 307

Length = 477

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score =  100 bits (250), Expect = 2e-22
 Identities = 86/285 (30%), Positives = 130/285 (45%), Gaps = 30/285 (10%)

Query: 428 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDA 487
           TPL  A R+    IV + +++GA ++    +   PL  A ++G  DI  LL+ +G  VD 
Sbjct: 37  TPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNG--VDT 94

Query: 488 PTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 547
                 + L I   E +D + +IL + G  +     +  T LH A K G ++  +ML   
Sbjct: 95  ------SILPIPCIE-KDMIKTIL-DCGIDVNIKDAELKTFLHYAIKKGDLESIKMLF-- 144

Query: 548 DAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKN 607
                          E GA +      G  P+H+A K+    I ++LL+K A  + +  N
Sbjct: 145 ---------------EYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNN 189

Query: 608 GVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKP 667
           G +PLH A+ Y       LL+D G       KNG+TPLH A   N+   A  LL  NA  
Sbjct: 190 GESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRS--AIELLINNASI 247

Query: 668 NAESKAGFTPLHLSAQ-EGHTDMSSLLIEHGATVSHQAKNGLTPL 711
           N +   G TPLH +       D+  +L+ H A +S +   G  P+
Sbjct: 248 NDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPI 292

Length = 434

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score =  100 bits (252), Expect = 3e-22
 Identities = 78/270 (28%), Positives = 118/270 (43%), Gaps = 29/270 (10%)

Query: 581 LAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVA---LLLLDRGASPHAV 637
           L A    ++  + LL   A V+ +G+ G TPLH+  HY  + V     LLL+ GA  +A 
Sbjct: 20  LNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAP 79

Query: 638 AKNGYTPLHI-AAKKNQMDIATTLLEYNAKPNAESKAGFTPLH--LSAQEGHTDMSSLLI 694
            + G+TPLH+       +D+   L++  A  NA+ K G TPLH  LS    +  +  LL+
Sbjct: 80  ERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLL 139

Query: 695 EHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTK--AGFTPLHIASHFGQ 752
             GA V+     G+TPL +  +    NV  + +   A  D         + LH      +
Sbjct: 140 RKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFK 199

Query: 753 LN--MVRYLVENGANVNATTNLGYTPLHQASQQG--RVLIIDLLLGAGAQPNATTNL--- 805
               +VR L+  G +  AT  LG TPLH  +     +  ++  LL AG   NA       
Sbjct: 200 PRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQT 259

Query: 806 ------------FCCATILVKNGAEIDPVT 823
                        C    L+  GA+I+ V+
Sbjct: 260 PLHYAAVFNNPRACRR--LIALGADINAVS 287

Length = 471

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 98.8 bits (246), Expect = 1e-21
 Identities = 78/273 (28%), Positives = 118/273 (43%), Gaps = 31/273 (11%)

Query: 462 PLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKE----GQDEVASILTESGAS 517
           PLH A    N D+   LL  G +V+ P     T LHI  KE    G  E+   + +   S
Sbjct: 40  PLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKC--S 97

Query: 518 ITATTKKGFTPLHLAAKYGRMKIAQMLL----------------QKDAPVDSQGKVASIL 561
           +  T        +       ++I +++L                +K      + ++  +L
Sbjct: 98  VFYTLVAIKDAFN----NRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLL 153

Query: 562 TESGASITATTK-KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDH 620
              GA I    + KG T LH A +    ++ ++LL   A V+   K   +PLH A  + +
Sbjct: 154 LSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYN 213

Query: 621 QNVALLLLDRGASPHAVAKNGYTPLHIAAKK-NQMDIATTLLEYNAKPNAESKA-GFTPL 678
           + +  +LL+ GAS  A  K G TPLHI+       DI   LLE+    NA+S   G T L
Sbjct: 214 KPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTAL 273

Query: 679 HLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPL 711
           H S +        LL+E+GA ++      LTPL
Sbjct: 274 HSSIKS--ERKLKLLLEYGADINSLNSYKLTPL 304

Length = 477

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 97.8 bits (243), Expect = 1e-21
 Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 15/229 (6%)

Query: 622 NVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLS 681
           ++A  LLD G +P+    +G +P+ +A K    +    L+++ A P+ +     + LH +
Sbjct: 16  DIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDA 75

Query: 682 AQEGHTDMSSLLIEHGATVSHQA-KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
            +EG       L++ G        K+G+TPLHL     K+++  + +  GA+ D      
Sbjct: 76  VEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDK 135

Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
           F+PLH+A   G +  +  L+++ A ++     G TPL  A  +G + I  +LL +GA  +
Sbjct: 136 FSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANID 195

Query: 801 -----ATTNLFCCA---------TILVKNGAEIDPVTKLSDEHEKSIDL 835
                      C A          + +K GA+ + +  +  E    +D+
Sbjct: 196 YFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTILDM 244

Length = 413

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 89.6 bits (223), Expect = 1e-21
 Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 2/92 (2%)

Query: 430 LHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPT 489
           LHLAA+    ++V++LL  GA V+    +  T LH+A+R GN +I  LLL+HGA V+A  
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLG--DTDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 490 KDGYTALHISAKEGQDEVASILTESGASITAT 521
           KDG TALH++A+ G  E+  +L E GA I   
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 99.0 bits (246), Expect = 3e-21
 Identities = 93/309 (30%), Positives = 150/309 (48%), Gaps = 36/309 (11%)

Query: 538 MKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 597
           MK+ +  +Q+D     +  +A +L E GA + A      TP+H AA+ G  K+  +LL  
Sbjct: 146 MKLIKERIQQD-----ELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSY 200

Query: 598 DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIA 657
            A V+    + ++ L  A    + +    ++D  ++   + KN  + L   A +N+ D+ 
Sbjct: 201 GADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSN---INKNDLSLLK--AIRNE-DLE 254

Query: 658 TTLLEYNA--KPNAESKAGFTPLHLSAQEGHTDMSSL---LIEHGATVSHQAKNGLTPLH 712
           T+LL Y+A    N+      TPLH ++Q     +S L   L+E GA V+ +   G TPL+
Sbjct: 255 TSLLLYDAGFSVNSIDDCKNTPLHHASQA--PSLSRLVPKLLERGADVNAKNIKGETPLY 312

Query: 713 LCAQE--DKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQL-NMVRYLVENGANVNAT 769
           L A+   D  N+ T+ M  GA+++   +   TPLH AS   +  ++V  L+E GANVNA 
Sbjct: 313 LMAKNGYDTENIRTLIML-GADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNAR 371

Query: 770 TNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT--------------TNLFCCATILVKN 815
                TP+H A+ +  V+II+ LL  GA   A               TN +     L+  
Sbjct: 372 DYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDR 431

Query: 816 GAEIDPVTK 824
           GA ++   K
Sbjct: 432 GANVNSKNK 440

Length = 682

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 97.6 bits (243), Expect = 3e-21
 Identities = 82/311 (26%), Positives = 131/311 (42%), Gaps = 48/311 (15%)

Query: 96  FTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKW-GKVAMVELLISKG--- 151
           F PL+ A +  +  VV+ LL++G N       ++TPLH+ CK   K+ M E++ S     
Sbjct: 38  FIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCS 97

Query: 152 -ANIEAKTRDG------------LTPLHCAARS---------GHDNVID-----ILIEKG 184
                   +D             LT  +   ++           D++I+     +L+  G
Sbjct: 98  VFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYG 157

Query: 185 AALYSKTKNGL-APLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVA 243
           A +  K ++     LH A++   +  T +L+ +GA V+       + LH A    +  + 
Sbjct: 158 ADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIV 217

Query: 244 KTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARA-LNGF 302
             LL+  A  +AR   G TPLHI+         +C    + K LL+   D NA++ + G 
Sbjct: 218 HILLENGASTDARDKCGNTPLHIS-------VGYCKDYDILKLLLEHGVDVNAKSYILGL 270

Query: 303 TPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVA----SFMGCMNIAIF--LLQA 356
           T LH + K  R   ++LLL+YGA I +     LTPL  A      +    I I    L  
Sbjct: 271 TALHSSIKSER--KLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNICLLK 328

Query: 357 GAAPDTATVRG 367
              PD     G
Sbjct: 329 RIKPDIKNSEG 339

Length = 477

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 88.1 bits (219), Expect = 4e-21
 Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 2/92 (2%)

Query: 305 LHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTAT 364
           LH+A K    ++V+LLL+ GA +        T LH+A+  G + I   LL+ GA  +   
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 365 VRGETPLHLAARANQTDIVRILLRNGASVDAR 396
             G T LHLAAR    +IV++LL +GA ++ +
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 88.1 bits (219), Expect = 4e-21
 Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 99  LYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKT 158
           L++AA+  +  +V+ LL KG +  +      T LH+A + G + +V+LL+  GA++ AK 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGAD--VNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 159 RDGLTPLHCAARSGHDNVIDILIEKGA 185
           +DG T LH AAR+G+  ++ +L+E GA
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGA 85

Length = 91

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 96.5 bits (240), Expect = 7e-21
 Identities = 70/286 (24%), Positives = 119/286 (41%), Gaps = 27/286 (9%)

Query: 131 PLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSK 190
           PLH A +   + +V+ L+++G N+       LTPLH   +    N + +       + S 
Sbjct: 40  PLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICK--EPNKLGM----KEMIRSI 93

Query: 191 TKNGL-----APLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKT 245
            K  +     A     +  + E    +L      +  I + Y+             + K 
Sbjct: 94  NKCSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDII-EAEITKL 152

Query: 246 LLDRKADPNARALN-GFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTP 304
           LL   AD N +  + G T LH A +    +        + + LL   A+ N       +P
Sbjct: 153 LLSYGADINMKDRHKGNTALHYATENKDQR--------LTELLLSYGANVNIPDKTNNSP 204

Query: 305 LHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIF--LLQAGAAPDT 362
           LH A K     +V +LL+ GAS  A  + G TPLH++    C +  I   LL+ G   + 
Sbjct: 205 LHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISV-GYCKDYDILKLLLEHGVDVNA 263

Query: 363 -ATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVA 407
            + + G T LH + ++ +   +++LL  GA +++      TPL  A
Sbjct: 264 KSYILGLTALHSSIKSER--KLKLLLEYGADINSLNSYKLTPLSSA 307

Length = 477

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 95.8 bits (238), Expect = 8e-21
 Identities = 81/317 (25%), Positives = 123/317 (38%), Gaps = 56/317 (17%)

Query: 303 TPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDT 362
           TPL  A +    K+VEL +K+GA I         PL  A  +G  +I   L+  G   DT
Sbjct: 37  TPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGV--DT 94

Query: 363 ATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALT 422
           +         L     + D+++ +L  G  V+ +  E +T          F         
Sbjct: 95  SI--------LPIPCIEKDMIKTILDCGIDVNIKDAELKT----------F--------- 127

Query: 423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
                  LH A +    + +++L   GA V+        P+H+A +    DI  LLL+ G
Sbjct: 128 -------LHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKG 180

Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQ 542
           A  +    +G + LH +A+ G      +L + G  I    K GFTPLH A  + R  I  
Sbjct: 181 AYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIEL 240

Query: 543 MLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYG-RMKIAQMLLQKDAPV 601
           ++                   + ASI      G TPLH A      + I  +LL   A +
Sbjct: 241 LI-------------------NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADI 281

Query: 602 DSQGKNGVTPLHVASHY 618
             +   G  P+  A  Y
Sbjct: 282 SIKDNKGENPIDTAFKY 298

Length = 434

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 94.9 bits (236), Expect = 2e-20
 Identities = 77/297 (25%), Positives = 119/297 (40%), Gaps = 39/297 (13%)

Query: 302 FTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMN---IAIFLLQAGA 358
           F PLH A +     VV+ LL  G ++       LTPLH+     C     + +  +    
Sbjct: 38  FIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHII----CKEPNKLGMKEMIRSI 93

Query: 359 APDTATVRGETPLHLAARANQTDIVRILLRNG---------ASVDARAREDQTPLHVASR 409
              +        +  A      +I +I+L N            +D ++++D     +   
Sbjct: 94  NKCSVF-YTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKL 152

Query: 410 LRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRL 469
           L  +  A  +   R +G T LH A       +  +LL  GA+V+   + + +PLH A + 
Sbjct: 153 LLSYG-ADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKH 211

Query: 470 GNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQD-EVASILTESGASITA-TTKKGFT 527
            N  I  +LL++GAS DA  K G T LHIS    +D ++  +L E G  + A +   G T
Sbjct: 212 YNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLT 271

Query: 528 PLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK 584
            LH + K  R                      +L E GA I +      TPL  A K
Sbjct: 272 ALHSSIKSER-------------------KLKLLLEYGADINSLNSYKLTPLSSAVK 309

Length = 477

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 94.3 bits (234), Expect = 2e-20
 Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 2/225 (0%)

Query: 548 DAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKN 607
           DA +  +  +A  L + G +       G +P+ LA K+   +  ++L++  A  D +  +
Sbjct: 8   DAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPD 67

Query: 608 GVTPLHVA-SHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK 666
             + LH A    D + V  LL     +     K+G TPLH+A    ++DI   L+   A 
Sbjct: 68  IESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGAD 127

Query: 667 PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATIT 726
           P+  +   F+PLHL+   G      LLI+H A +  +   G TPL +   +  + +  + 
Sbjct: 128 PDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKML 187

Query: 727 MFNGAEIDPVTKAG-FTPLHIASHFGQLNMVRYLVENGANVNATT 770
           + +GA ID   K G    L  A    ++++VR  ++ GA+ N   
Sbjct: 188 LDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMF 232

Length = 413

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 94.3 bits (234), Expect = 2e-20
 Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 9/218 (4%)

Query: 341 ASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARARED 400
           A   G ++IA  LL  G  P+     G +P+ LA +   ++ +++L+++GA  D +  + 
Sbjct: 9   AILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDI 68

Query: 401 QTPLH--------VASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASV 452
           ++ LH         A             +    G TPLHLA    + DI+++L+  GA  
Sbjct: 69  ESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADP 128

Query: 453 DARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILT 512
           D    +  +PLH+A  +G+     LL+ H A +D     G T L I+  +G   +  +L 
Sbjct: 129 DIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLL 188

Query: 513 ESGASITATTKKG-FTPLHLAAKYGRMKIAQMLLQKDA 549
           +SGA+I    K G    L  A +  ++ I ++ +++ A
Sbjct: 189 DSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGA 226

Length = 413

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 94.0 bits (234), Expect = 3e-20
 Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 20/192 (10%)

Query: 52  EVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQE--NHDG 109
             + +N+     LSN K+  T  +E+ K+L++ GA +N    NG TPL  A  +  N   
Sbjct: 63  SSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYS 122

Query: 110 VVRYLLSKGGNQTLATEHNITPLHVACKWGKVAM------------------VELLISKG 151
           +V YLL  G N  +        LH+  +  K+ +                  V  L+S G
Sbjct: 123 IVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRVNYLLSYG 182

Query: 152 ANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATR 211
             I  K   G TPLH A  + +   +  L++ GA      K G  PLH+A   +++   +
Sbjct: 183 VPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFK 242

Query: 212 VLIYHGAGVDEI 223
           +L+ +G  +  I
Sbjct: 243 LLLNNGPSIKTI 254

Length = 422

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 85.0 bits (211), Expect = 5e-20
 Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 28/117 (23%)

Query: 371 LHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPL 430
           LHLAA+    ++V++LL  GA V+    +                            T L
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD----------------------------TAL 32

Query: 431 HLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDA 487
           HLAAR    +IV++LL +GA V+A+ ++  T LH+A+R GN +I  LLL+HGA ++ 
Sbjct: 33  HLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINL 89

Length = 91

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 93.1 bits (231), Expect = 6e-20
 Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 16/221 (7%)

Query: 110 VVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAA 169
           + R LL  G N        I+P+ +A K+     ++LL+  GA  + K  D  + LH A 
Sbjct: 17  IARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAV 76

Query: 170 RSGHDNVIDILIEKGA----ALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITV 225
             G    ++ L++ G       Y   K+G+ PLH+A+        ++LI  GA  D    
Sbjct: 77  EEGDVKAVEELLDLGKFADDVFY---KDGMTPLHLATILKKLDIMKLLIARGADPDIPNT 133

Query: 226 DYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAK 285
           D  + LH+A   G ++  + L+D KA  +     G TPL IA  K          + + K
Sbjct: 134 DKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAK--------GDIAICK 185

Query: 286 TLLDRKADPNARALNG-FTPLHIACKKNRYKVVELLLKYGA 325
            LLD  A+ +    NG    L  A + N+  +V L +K GA
Sbjct: 186 MLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGA 226

Length = 413

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 85.0 bits (211), Expect = 6e-20
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 10/100 (10%)

Query: 231 LHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDR 290
           LH+A+  G++ + K LL++ AD N    +  T LH+A +          ++ + K LL+ 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLG--DTDTALHLAARNG--------NLEIVKLLLEH 50

Query: 291 KADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAAT 330
            AD NA+  +G T LH+A +    ++V+LLL++GA I   
Sbjct: 51  GADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 92.7 bits (230), Expect = 9e-20
 Identities = 74/300 (24%), Positives = 135/300 (45%), Gaps = 14/300 (4%)

Query: 484 SVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQM 543
           SVD  T    T L  + + G  ++  +  + GA I     K   PL  A K G   I ++
Sbjct: 31  SVDETT----TPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKL 86

Query: 544 LLQKDA-----PV-DSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 597
           L+         P+   +  +   + + G  +     +  T LH A K G ++  +ML + 
Sbjct: 87  LIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEY 146

Query: 598 DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIA 657
            A V+ +  NG  P+H+A  ++  ++  LLL++GA  +    NG +PLH AA+       
Sbjct: 147 GADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACI 206

Query: 658 TTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQE 717
             L+++      + K GFTPLH +A   +     LLI + A+++ Q  +G TPLH     
Sbjct: 207 KLLIDHGNHIMNKCKNGFTPLH-NAIIHNRSAIELLINN-ASINDQDIDGSTPLHHAINP 264

Query: 718 D-KVNVATITMFNGAEIDPVTKAGFTPLHIA-SHFGQLNMVRYLVENGANVNATTNLGYT 775
              +++  I +++ A+I      G  P+  A  +  +  +++ ++ N   +     L  +
Sbjct: 265 PCDIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVIKDIIANAVLIKEADKLKDS 324

Length = 434

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 91.6 bits (227), Expect = 2e-19
 Identities = 80/288 (27%), Positives = 123/288 (42%), Gaps = 30/288 (10%)

Query: 507 VASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGA 566
           +  I+   G  I  +  +  TPL  A + G  KI ++ ++                  GA
Sbjct: 17  IEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIK-----------------HGA 59

Query: 567 SITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALL 626
            I     K   PL  A K G   I ++L+  D  VD+     + P+        +++   
Sbjct: 60  DINHINTKIPHPLLTAIKIGAHDIIKLLI--DNGVDTS----ILPIPCIE----KDMIKT 109

Query: 627 LLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGH 686
           +LD G   +       T LH A KK  ++    L EY A  N E   G  P+H++ +   
Sbjct: 110 ILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNF 169

Query: 687 TDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHI 746
            D+  LL+E GA  + +  NG +PLH  A+        + + +G  I    K GFTPLH 
Sbjct: 170 FDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHN 229

Query: 747 ASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQG-RVLIIDLLL 793
           A    + + +  L+ N A++N     G TPLH A      + IID+LL
Sbjct: 230 AIIHNR-SAIELLINN-ASINDQDIDGSTPLHHAINPPCDIDIIDILL 275

Length = 434

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 83.5 bits (207), Expect = 2e-19
 Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 2/92 (2%)

Query: 463 LHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATT 522
           LH+A++ GN ++  LLL+ GA V+    D  TALH++A+ G  E+  +L E GA + A  
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 523 KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQ 554
           K G T LHLAA+ G ++I ++LL+  A ++ +
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 82.7 bits (205), Expect = 3e-19
 Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 2/92 (2%)

Query: 579 LHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVA 638
           LHLAAK G +++ ++LL+K A V+    +  T LH+A+   +  +  LLL+ GA  +A  
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE 670
           K+G T LH+AA+   ++I   LLE+ A  N +
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 89.3 bits (221), Expect = 1e-18
 Identities = 72/303 (23%), Positives = 132/303 (43%), Gaps = 35/303 (11%)

Query: 72  TGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITP 131
           +G  ++ ++ + +GA IN  +     PL  A +     +++ L+  G + ++        
Sbjct: 45  SGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSI-------- 96

Query: 132 LHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKT 191
           L + C   +  M++ ++  G ++  K  +  T LH A + G    I +L E GA +  + 
Sbjct: 97  LPIPCI--EKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIED 154

Query: 192 KNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKA 251
            NG  P+H+A + +     ++L+  GA  +    +  + LH A+  G     K L+D   
Sbjct: 155 DNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGN 214

Query: 252 DPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIA--- 308
               +  NGFTPLH A   NR           A  LL   A  N + ++G TPLH A   
Sbjct: 215 HIMNKCKNGFTPLHNAIIHNR----------SAIELLINNASINDQDIDGSTPLHHAINP 264

Query: 309 -CKKNRYKVVELLLKYGASIAATTESGLTPLHVA-SFMGCMNI-------AIFLLQAGAA 359
            C  +   ++++LL + A I+     G  P+  A  ++    +       A+ + +A   
Sbjct: 265 PCDID---IIDILLYHKADISIKDNKGENPIDTAFKYINKDPVIKDIIANAVLIKEADKL 321

Query: 360 PDT 362
            D+
Sbjct: 322 KDS 324

Length = 434

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 89.6 bits (222), Expect = 1e-18
 Identities = 70/267 (26%), Positives = 111/267 (41%), Gaps = 50/267 (18%)

Query: 576 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHV--------------------- 614
           F PLH A +   + + + LL +   V+      +TPLH+                     
Sbjct: 38  FIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCS 97

Query: 615 ----------ASHYDHQNVA-LLLLDRGASPHAVAKNGYTPLHIAAKKNQMD------IA 657
                     A +  +  +  ++L +R        KN  T   +   K   D      I 
Sbjct: 98  VFYTLVAIKDAFNNRNVEIFKIILTNR-------YKNIQTIDLVYIDKKSKDDIIEAEIT 150

Query: 658 TTLLEYNAKPNAESK-AGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQ 716
             LL Y A  N + +  G T LH + +     ++ LL+ +GA V+   K   +PLH   +
Sbjct: 151 KLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVK 210

Query: 717 EDKVNVATITMFNGAEIDPVTKAGFTPLHIA-SHFGQLNMVRYLVENGANVNA-TTNLGY 774
                +  I + NGA  D   K G TPLHI+  +    ++++ L+E+G +VNA +  LG 
Sbjct: 211 HYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGL 270

Query: 775 TPLHQASQQGRVLIIDLLLGAGAQPNA 801
           T LH + +  R L   LLL  GA  N+
Sbjct: 271 TALHSSIKSERKL--KLLLEYGADINS 295

Length = 477

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 85.6 bits (211), Expect = 1e-18
 Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 10/166 (6%)

Query: 425 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR-----LGNGDIASLLL 479
            G  PLH AA      IV++LL +GA V+A+  +  TPLH+A+       GN ++A LLL
Sbjct: 72  DGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLL 131

Query: 480 QHGASVDAPT---KDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYG 536
           + GA +D      +DG T LH +A  G  ++  +L E+GA   +    G T L  AAK G
Sbjct: 132 EAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNG 191

Query: 537 RMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLA 582
           R+++ ++LL K   +            + A+++       T L +A
Sbjct: 192 RIELVKLLLDKGLHLSLLKFNLEG--VANANVSKRNILNLTSLIIA 235

Length = 235

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 79.6 bits (197), Expect = 4e-18
 Identities = 33/90 (36%), Positives = 58/90 (64%), Gaps = 2/90 (2%)

Query: 132 LHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKT 191
           LH+A K G + +V+LL+ KGA++     D  T LH AAR+G+  ++ +L+E GA + +K 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 192 KNGLAPLHMASQGDHEAATRVLIYHGAGVD 221
           K+G   LH+A++  +    ++L+ HGA ++
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADIN 88

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 79.6 bits (197), Expect = 4e-18
 Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 10/100 (10%)

Query: 198 LHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARA 257
           LH+A++  +    ++L+  GA V+    D  TALH+A+  G++ + K LL+  AD NA+ 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVN--LGDTDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 258 LNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNAR 297
            +G T LH+A +          ++ + K LL+  AD N +
Sbjct: 59  KDGNTALHLAARN--------GNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 79.6 bits (197), Expect = 4e-18
 Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 2/92 (2%)

Query: 612 LHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAES 671
           LH+A+   +  +  LLL++GA  +    +  T LH+AA+   ++I   LLE+ A  NA+ 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 672 KAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQ 703
           K G T LHL+A+ G+ ++  LL+EHGA ++ +
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 86.5 bits (214), Expect = 1e-17
 Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 11/247 (4%)

Query: 110 VVRYLLSKGGNQTLATEHNI-TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCA 168
           + + LLS G +  +   H   T LH A +     + ELL+S GAN+    +   +PLH A
Sbjct: 149 ITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHA 208

Query: 169 ARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQG--DHEAATRVLIYHGAGVD-EITV 225
            +  +  ++ IL+E GA+  ++ K G  PLH++     D++   ++L+ HG  V+ +  +
Sbjct: 209 VKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYD-ILKLLLEHGVDVNAKSYI 267

Query: 226 DYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAK 285
             LTALH +      R  K LL+  AD N+      TPL  A K+  Y   +   + ++ 
Sbjct: 268 LGLTALHSSIK--SERKLKLLLEYGADINSLNSYKLTPLSSAVKQ--YLCINIGRILISN 323

Query: 286 TLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVAS-FM 344
             L ++  P+ +   GF   ++ C  +  ++ ++  K    +       +T  +    F+
Sbjct: 324 ICLLKRIKPDIKNSEGFI-DNMDCITSNKRLNQIKDKCEDELNRLASIKITNTYSFDDFL 382

Query: 345 GCMNIAI 351
            C N  +
Sbjct: 383 KCDNSTL 389

Length = 477

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 86.2 bits (213), Expect = 1e-17
 Identities = 65/241 (26%), Positives = 94/241 (39%), Gaps = 17/241 (7%)

Query: 459 DQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASI 518
           DQ  L  A   G  DIA  LL  G + +    DG + + ++ K    E   +L + GA  
Sbjct: 2   DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIP 61

Query: 519 TATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTP 578
                   + LH A + G +K  + LL      D                    K G TP
Sbjct: 62  DVKYPDIESELHDAVEEGDVKAVEELLDLGKFADD----------------VFYKDGMTP 105

Query: 579 LHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVA 638
           LHLA    ++ I ++L+ + A  D    +  +PLH+A          LL+D  A      
Sbjct: 106 LHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIED 165

Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAG-FTPLHLSAQEGHTDMSSLLIEHG 697
             G TPL IA  K  + I   LL+  A  +   K G    L  + +    D+  L I+ G
Sbjct: 166 CCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRG 225

Query: 698 A 698
           A
Sbjct: 226 A 226

Length = 413

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 78.6 bits (194), Expect = 2e-17
 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 13/104 (12%)

Query: 734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
           +   + G TPLH+A+  G L +V+ L+ENGA+VNA  N G TPLH A++ G + I+ LLL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 794 GAGAQPNATTNLFC-------------CATILVKNGAEIDPVTK 824
             GA  NA                      +L+K+GA+++   K
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDK 104

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 77.7 bits (192), Expect = 2e-17
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 10/98 (10%)

Query: 264 LHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKY 323
           LH+A K          ++ + K LL++ AD N    +  T LH+A +    ++V+LLL++
Sbjct: 1   LHLAAKNG--------NLELVKLLLEKGADVNLG--DTDTALHLAARNGNLEIVKLLLEH 50

Query: 324 GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPD 361
           GA + A  + G T LH+A+  G + I   LL+ GA  +
Sbjct: 51  GADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADIN 88

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 77.3 bits (191), Expect = 2e-17
 Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 28/118 (23%)

Query: 338 LHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARA 397
           LH+A+  G + +   LL+ GA  D      +T LHLAAR    +IV++LL +GA V+A+ 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGA--DVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 398 REDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDAR 455
           ++                          G T LHLAAR    +IV++LL +GA ++ +
Sbjct: 59  KD--------------------------GNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 77.3 bits (191), Expect = 2e-17
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 2/92 (2%)

Query: 711 LHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATT 770
           LHL A+   + +  + +  GA+++       T LH+A+  G L +V+ L+E+GA+VNA  
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 771 NLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT 802
             G T LH A++ G + I+ LLL  GA  N  
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 77.3 bits (191), Expect = 2e-17
 Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 2/92 (2%)

Query: 165 LHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEIT 224
           LH AA++G+  ++ +L+EKGA +     +    LH+A++  +    ++L+ HGA V+   
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 225 VDYLTALHVASHCGHVRVAKTLLDRKADPNAR 256
            D  TALH+A+  G++ + K LL+  AD N +
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 82.2 bits (202), Expect = 2e-17
 Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 8/140 (5%)

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQN-----VALLLLD 629
           G  PLH AA  G  KI ++LL   A V+++  +G TPLH+A+   +       VA LLL+
Sbjct: 73  GRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLE 132

Query: 630 RGASPHAVA---KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGH 686
            GA         ++G TPLH AA     DI   LLE  A PN+ +  G T L  +A+ G 
Sbjct: 133 AGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGR 192

Query: 687 TDMSSLLIEHGATVSHQAKN 706
            ++  LL++ G  +S    N
Sbjct: 193 IELVKLLLDKGLHLSLLKFN 212

Length = 235

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 85.0 bits (210), Expect = 3e-17
 Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 16/248 (6%)

Query: 557 VASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVAS 616
           +  I+   G  I  +  +  TPL  A + G  KI ++ ++  A ++        PL  A 
Sbjct: 17  IEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAI 76

Query: 617 HYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFT 676
                ++  LL+D G           + L I   +  M    T+L+     N +     T
Sbjct: 77  KIGAHDIIKLLIDNGVDT--------SILPIPCIEKDM--IKTILDCGIDVNIKDAELKT 126

Query: 677 PLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPV 736
            LH + ++G  +   +L E+GA V+ +  NG  P+H+  + +  ++  + +  GA  +  
Sbjct: 127 FLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVK 186

Query: 737 TKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG 796
              G +PLH A+ +G    ++ L+++G ++      G+TPLH A    R   I+LL+   
Sbjct: 187 DNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRS-AIELLIN-- 243

Query: 797 AQPNATTN 804
              NA+ N
Sbjct: 244 ---NASIN 248

Length = 434

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 77.3 bits (191), Expect = 3e-17
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 19/109 (17%)

Query: 529 LHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRM 588
           LHLAAK G +++ ++LL+K A V+                        T LHLAA+ G +
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD-------------------TALHLAARNGNL 41

Query: 589 KIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAV 637
           +I ++LL+  A V+++ K+G T LH+A+   +  +  LLL+ GA  +  
Sbjct: 42  EIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 80.6 bits (198), Expect = 6e-17
 Identities = 55/197 (27%), Positives = 82/197 (41%), Gaps = 11/197 (5%)

Query: 168 AARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDE----I 223
             +   D ++  L+   +   S   +    L++       AA+   +     VD      
Sbjct: 11  INKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLP-AASLSELLLKLIVDRHLAAR 69

Query: 224 TVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWV 283
            +D    LH A+  G  ++ K LL   AD NA+  +G TPLH+A         +     V
Sbjct: 70  DLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIE---V 126

Query: 284 AKTLLDRKA---DPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHV 340
           AK LL+  A     N R  +G TPLH A       +VELLL+ GA   +    G+T L  
Sbjct: 127 AKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDP 186

Query: 341 ASFMGCMNIAIFLLQAG 357
           A+  G + +   LL  G
Sbjct: 187 AAKNGRIELVKLLLDKG 203

Length = 235

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 35/125 (28%)

Query: 645 LHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA 704
           LH+AAK   +++   LLE  A  N       T LHL+A+ G+ ++  LL+EHGA V+ + 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 705 KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA 764
           K+G T LHL A+                                  G L +V+ L+E+GA
Sbjct: 59  KDGNTALHLAAR---------------------------------NGNLEIVKLLLEHGA 85

Query: 765 NVNAT 769
           ++N  
Sbjct: 86  DINLK 90

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 78.3 bits (192), Expect = 4e-16
 Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 33/204 (16%)

Query: 291 KADPNARALNGFTPLHIACKKNRYKVVELLLK--YGASIAATTESGLTPLHVASFMGCMN 348
            ++P+ + LN +  L +        + ELLLK      +AA    G  PLH A+  G   
Sbjct: 31  LSNPSDKKLNLYLELALLP---AASLSELLLKLIVDRHLAARDLDGRLPLHSAASKGDDK 87

Query: 349 IAIFLLQAGAAPDTATVRGETPLHLAARANQT-----DIVRILLRNGASVDARAREDQTP 403
           I   LL +GA  +     G+TPLHLAA          ++ ++LL  GA +D     D   
Sbjct: 88  IVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRD--- 144

Query: 404 LHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPL 463
                                 G TPLH AA     DIV +LL  GA  ++R     T L
Sbjct: 145 --------------------EDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTAL 184

Query: 464 HVASRLGNGDIASLLLQHGASVDA 487
             A++ G  ++  LLL  G  +  
Sbjct: 185 DPAAKNGRIELVKLLLDKGLHLSL 208

Length = 235

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 74.7 bits (184), Expect = 5e-16
 Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 44/151 (29%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
             GH  VV +LLEN    + K       LH+AAK                          
Sbjct: 16  SNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKN------------------------- 50

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                          G  E+ K+L++ GA +N +  +G TPL++AA+  +  VV+ LL  
Sbjct: 51  ---------------GHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKH 95

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLI 148
           G +     +   TPLH+A K G + +V+LL+
Sbjct: 96  GADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 77.6 bits (190), Expect = 6e-16
 Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 8/193 (4%)

Query: 3   QGHDRVVAVLLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEV 62
              D ++  LL   +          +    +     A  L        ++  L+   L+ 
Sbjct: 14  CFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAARDLDG 73

Query: 63  SLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDG-----VVRYLLSK 117
            L      + G +++ K+L+ +GA +N +  +G TPL++AA   +       V + LL  
Sbjct: 74  RLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEA 133

Query: 118 GGNQ---TLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHD 174
           G +     L  E   TPLH A   G   +VELL+  GA+  ++   G+T L  AA++G  
Sbjct: 134 GADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRI 193

Query: 175 NVIDILIEKGAAL 187
            ++ +L++KG  L
Sbjct: 194 ELVKLLLDKGLHL 206

Length = 235

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 72.3 bits (178), Expect = 2e-15
 Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 19/109 (17%)

Query: 496 LHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG 555
           LH++AK G  E+  +L E GA +        T LHLAA+ G ++I ++LL+         
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEH-------- 50

Query: 556 KVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQ 604
                    GA + A  K G T LHLAA+ G ++I ++LL+  A ++ +
Sbjct: 51  ---------GADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 71.5 bits (176), Expect = 3e-15
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G  E+ K+L++ GA +N+   +  T L++AA+  +  +V+ LL  G +     +   T L
Sbjct: 8   GNLELVKLLLEKGADVNLG--DTDTALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTAL 65

Query: 133 HVACKWGKVAMVELLISKGANIEAK 157
           H+A + G + +V+LL+  GA+I  K
Sbjct: 66  HLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 75.6 bits (185), Expect = 3e-15
 Identities = 59/190 (31%), Positives = 85/190 (44%), Gaps = 26/190 (13%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
               L L   A+ +++  + L     + AR  + + PLH A+  G+  I  LLL  GA V
Sbjct: 41  LYLELALLPAASLSEL-LLKLIVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADV 99

Query: 486 DAPTKDGYTALHISAKEGQD-----EVASILTESGAS---ITATTKKGFTPLHLAAKYGR 537
           +A   DG T LH++A  G       EVA +L E+GA         + G TPLH AA  G 
Sbjct: 100 NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGD 159

Query: 538 MKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 597
             I ++LL                 E+GA   +    G T L  AAK GR+++ ++LL K
Sbjct: 160 ADIVELLL-----------------EAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDK 202

Query: 598 DAPVDSQGKN 607
              +     N
Sbjct: 203 GLHLSLLKFN 212

Length = 235

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 78.7 bits (194), Expect = 4e-15
 Identities = 68/303 (22%), Positives = 124/303 (40%), Gaps = 51/303 (16%)

Query: 380 TDIVRILLRNGASVDARAREDQTPL-HVASRLRRFSSASQSALTRVRGETPLHLAARANQ 438
           TDIV++ +  GA+V+    E  TPL  + S ++ +                         
Sbjct: 51  TDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHM---------------------- 88

Query: 439 TDIVRILLRNGASVDARAREDQTPLHVA---SRLGNGDIASLLLQHGASVDAPTKDGYTA 495
            DIV+IL+ NGA ++ +  + +TPL+       + N +I   ++++GA      KDG+T 
Sbjct: 89  LDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTM 148

Query: 496 LHISAKEG---QDEVASILTESGASI-TATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPV 551
           L +  +       E+  +L E G  I T   K+ +  LH   KY   +I       DA  
Sbjct: 149 LQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRI-------DA-- 199

Query: 552 DSQGKVASILTESGASITA---TTKKGFTPLHLAAKYGRMKIAQMLLQ---KDAPVDSQG 605
                +  +  ++G  I     + KK F     +  Y   +  + +L        ++   
Sbjct: 200 ----DILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVD 255

Query: 606 KNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
           + G  PL+ +  ++++ +   LL  G   + + + G T L  A +     I  ++L    
Sbjct: 256 ELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNK-- 313

Query: 666 KPN 668
           KPN
Sbjct: 314 KPN 316

Length = 489

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 76.2 bits (187), Expect = 2e-14
 Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 41/258 (15%)

Query: 135 ACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNG 194
           A  +G++ +   L+  G N   +  DG++P+  A +      I +L++ GA    K  + 
Sbjct: 9   AILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDI 68

Query: 195 LAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPN 254
            + LH A +     A   L+  G   D++                               
Sbjct: 69  ESELHDAVEEGDVKAVEELLDLGKFADDVFYK---------------------------- 100

Query: 255 ARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRY 314
               +G TPLH+A    +        + + K L+ R ADP+    + F+PLH+A      
Sbjct: 101 ----DGMTPLHLATILKK--------LDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDI 148

Query: 315 KVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGE-TPLHL 373
           K +ELL+ + A +      G TPL +A   G + I   LL +GA  D     G    L  
Sbjct: 149 KGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCY 208

Query: 374 AARANQTDIVRILLRNGA 391
           A   N+ DIVR+ ++ GA
Sbjct: 209 AIENNKIDIVRLFIKRGA 226

Length = 413

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 77.0 bits (190), Expect = 2e-14
 Identities = 73/267 (27%), Positives = 97/267 (36%), Gaps = 61/267 (22%)

Query: 301 GFTPLHIACKKNRYK-VVELLLKYGASIAATTESGLTPLHVAS---FMGCMNIAIFLLQA 356
           G + L +A  +N    + ELLL            G T LH  S         I + LL A
Sbjct: 52  GRSALFVAAIENENLELTELLLNLSCRG----AVGDTLLHAISLEYVDAVEAILLHLLAA 107

Query: 357 GA-------APDTAT---VRGETPLHLAARANQTDIVRILLRNGASVDARA--REDQTPL 404
                    A D  T     G T LHLAA     +IV++LL  GASV ARA         
Sbjct: 108 FRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQ 167

Query: 405 HVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLH 464
            V S                 GE+PL+ AA      IV +L  + A +            
Sbjct: 168 GVDS--FYH------------GESPLNAAACLGSPSIVALLSEDPADILT---------- 203

Query: 465 VASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASIL-----TESGASIT 519
            A  LGN       L H   ++   K  Y  L        +   S+L     ++    I 
Sbjct: 204 -ADSLGNT------LLHLLVMENEFKAEYEELSCQMY---NFALSLLDKLRDSKELEVI- 252

Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
               +G TPL LAAK GR+ + ++ L 
Sbjct: 253 -LNHQGLTPLKLAAKEGRIVLFRLKLA 278

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 72.9 bits (178), Expect = 3e-14
 Identities = 58/239 (24%), Positives = 91/239 (38%), Gaps = 59/239 (24%)

Query: 556 KVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK-DAPVDSQGKNGVTPLHV 614
            VA +L  S      + KK    L LA          +L    D  + ++  +G  PLH 
Sbjct: 20  LVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAARDLDGRLPLHS 79

Query: 615 ASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAG 674
           A+      +  LLL  GA  +A   +G TPLH+AA                         
Sbjct: 80  AASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNG---------------------- 117

Query: 675 FTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID 734
                 +  EG+ +++ LL+E GA                              +    +
Sbjct: 118 ------NPPEGNIEVAKLLLEAGA------------------------------DLDVNN 141

Query: 735 PVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
              + G TPLH A+  G  ++V  L+E GA+ N+  + G T L  A++ GR+ ++ LLL
Sbjct: 142 LRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLL 200

Length = 235

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 76.1 bits (187), Expect = 5e-14
 Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 29/180 (16%)

Query: 353 LLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRR 412
           LL+A   PD    +G TPLH+AA     D V +LL++  +V  R                
Sbjct: 544 LLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIR---------------- 587

Query: 413 FSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNG 472
                        G T L  A  A    I RIL    +  D  A  D   L  A++  + 
Sbjct: 588 ----------DANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDL--LCTAAKRNDL 635

Query: 473 DIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASIT-ATTKKGFTPLHL 531
                LL+ G +VD+    G TAL ++  E   ++  +L  +GA +  A T   F+P  L
Sbjct: 636 TAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTEL 695

Length = 823

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 69.9 bits (170), Expect = 3e-13
 Identities = 55/189 (29%), Positives = 80/189 (42%), Gaps = 41/189 (21%)

Query: 141 VAMVELLISKGANIEAKTRD--GLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPL 198
            ++ ELL+    +     RD  G  PLH AA  G D ++ +L+  GA + +K  +G  PL
Sbjct: 51  ASLSELLLKLIVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPL 110

Query: 199 HMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKA---DPNA 255
           H+A+   +                               G++ VAK LL+  A     N 
Sbjct: 111 HLAALNGNPPE----------------------------GNIEVAKLLLEAGADLDVNNL 142

Query: 256 RALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYK 315
           R  +G TPLH A               + + LL+  ADPN+R   G T L  A K  R +
Sbjct: 143 RDEDGNTPLHWAALNGDAD--------IVELLLEAGADPNSRNSYGVTALDPAAKNGRIE 194

Query: 316 VVELLLKYG 324
           +V+LLL  G
Sbjct: 195 LVKLLLDKG 203

Length = 235

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 67.5 bits (164), Expect = 2e-12
 Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 8/142 (5%)

Query: 88  INVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGK-----VA 142
           +  + L+G  PL+ AA +  D +V+ LL+ G +         TPLH+A   G      + 
Sbjct: 66  LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIE 125

Query: 143 MVELLISKGANIEAKTR---DGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLH 199
           + +LL+  GA+++       DG TPLH AA +G  +++++L+E GA   S+   G+  L 
Sbjct: 126 VAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALD 185

Query: 200 MASQGDHEAATRVLIYHGAGVD 221
            A++       ++L+  G  + 
Sbjct: 186 PAAKNGRIELVKLLLDKGLHLS 207

Length = 235

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 67.3 bits (164), Expect = 1e-11
 Identities = 60/258 (23%), Positives = 95/258 (36%), Gaps = 65/258 (25%)

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
           +G++P+ +A +     A ++L+ HGA  D    D  + LH A   G V+  + LLD    
Sbjct: 34  DGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLD---- 89

Query: 253 PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN 312
                L  F                 + V+                  G TPLH+A    
Sbjct: 90  -----LGKFA----------------DDVFYKD---------------GMTPLHLATILK 113

Query: 313 RYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLH 372
           +  +++LL+  GA          +PLH+A  MG +     L+   A  D     G TPL 
Sbjct: 114 KLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLI 173

Query: 373 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHL 432
           +A       I ++LL +GA++D   +                               L  
Sbjct: 174 IAMAKGDIAICKMLLDSGANIDYFGKNGCV-------------------------AALCY 208

Query: 433 AARANQTDIVRILLRNGA 450
           A   N+ DIVR+ ++ GA
Sbjct: 209 AIENNKIDIVRLFIKRGA 226

Length = 413

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 66.0 bits (161), Expect = 4e-11
 Identities = 61/255 (23%), Positives = 99/255 (38%), Gaps = 26/255 (10%)

Query: 140 KVAMVELLISKGANIEAKTRDGLTPLHCAARSGHD------NVIDILIEKGAALYSKTKN 193
              +V+L I+ GAN+     +  TPL C   S         +++ ILIE GA +  K  +
Sbjct: 50  STDIVKLFINLGANVNGLDNEYSTPL-CTILSNIKDYKHMLDIVKILIENGADINKKNSD 108

Query: 194 GLAPLH-MASQG--DHEAATRVLIYHGAGVDEITVDYLTALHVASHCGH---VRVAKTLL 247
           G  PL+ + S G  ++      +I +GA    +  D  T L V     H   + + K LL
Sbjct: 109 GETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLL 168

Query: 248 DRKADPNARA-LNGFTPLHIACKKNRYKSSHCNHVWVAKTLLD-----RKADPNARA--L 299
           ++  D N       +  LH   K N           + K  +D      K + + +   +
Sbjct: 169 EKGVDINTHNNKEKYDTLHCYFKYN----IDRIDADILKLFVDNGFIINKENKSHKKKFM 224

Query: 300 NGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA 359
                L    K+ +  +++ +  Y   I    E G  PL+ +       I  +LLQ G  
Sbjct: 225 EYLNSLLYDNKRFKKNILDFIFSY-IDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGD 283

Query: 360 PDTATVRGETPLHLA 374
            +  T  G T L  A
Sbjct: 284 INIITELGNTCLFTA 298

Length = 489

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 59.6 bits (145), Expect = 5e-11
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 15/90 (16%)

Query: 744 LHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
           LH+A+  G L +V+ L+E GA+VN       T LH A++ G + I+ LLL  GA  NA  
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDT--DTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 804 NLFC-------------CATILVKNGAEID 820
                               +L+++GA+I+
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADIN 88

Length = 91

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 65.1 bits (158), Expect = 6e-11
 Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 8/174 (4%)

Query: 627 LLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPL-HLSAQEG 685
           LL RG SP+    +G  PLHIA+K N   I   LL + A PNA  K   TPL +LS  + 
Sbjct: 58  LLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDD 117

Query: 686 HT-DMSSLLIEHGATVSHQA-KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTP 743
              +  +LL+++GA +++   + G  PL  C    +  V    M  G E   V K G   
Sbjct: 118 EVIERINLLVQYGAKINNSVDEEGCGPLLACTDPSE-RVFKKIMSIGFEARIVDKFGKNH 176

Query: 744 L--HIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQ--GRVLIIDLLL 793
           +  H+ S   + + + ++++ G + +   + G TPLH    +    V II+LLL
Sbjct: 177 IHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLL 230

Length = 446

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 63.1 bits (154), Expect = 3e-10
 Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 25/171 (14%)

Query: 7   RVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAAL-LLEVSFSNTKLEVSLSNTKLE 61
            +V +LLE     +      +  L  A  K     + +  L  + +N  ++ S     L 
Sbjct: 87  EIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLH 146

Query: 62  VSLSNTKFEATGQEEVAKILVDNGATINVQS----------------LNGFTPLYMAAQE 105
           + L + K +     ++ K+L+D G  IN ++                + GFTPL+ A   
Sbjct: 147 LYLESNKIDL----KILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYN 202

Query: 106 NHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEA 156
           N+   V+YLL  G N  L  ++  TPLH+A       + +LL++ G +I+ 
Sbjct: 203 NNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 253

Length = 422

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 55.3 bits (134), Expect = 4e-10
 Identities = 20/52 (38%), Positives = 31/52 (59%)

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILI 181
           T LH A   G++ +V+ L+ KG +I     DG T LH AA +G+  V+ +L+
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 62.1 bits (151), Expect = 7e-10
 Identities = 88/375 (23%), Positives = 154/375 (41%), Gaps = 68/375 (18%)

Query: 352 FLLQAGAAPDTATVRGETPLHLAARAN--QTDIVRILLRNGASVDARAREDQTPLHVASR 409
           FLL+ G   +    RG + L L  +    +  IV++L+ NGA V+ +   + TPL     
Sbjct: 21  FLLRTGFDVNE-EYRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKGYIE-TPL----- 73

Query: 410 LRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHV---A 466
                     A+ R R  T      +  +  IV++LL+ GA ++ +     +P+      
Sbjct: 74  ---------CAVLRNREITS----NKIKK--IVKLLLKFGADINLKTFNGVSPIVCFIYN 118

Query: 467 SRLGNGDIASLLLQHGASV-DAPTKDGYTALHISAKEG---QDEVASILTESGASITATT 522
           S + N D+   LL  G +V D     GY  LH+   E    + +V  IL   G ++   T
Sbjct: 119 SNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYL-ESFSVKKDVIKILLSFGVNLFEKT 177

Query: 523 K-KGFTPLHLAAKYGR-------MKIAQMLLQKDAPVDSQGKVASILTESGASITATTKK 574
              G TP+++   Y R       +K+ + L++K   +++    +  + ES          
Sbjct: 178 SLYGLTPMNI---YLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLES---------- 224

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
            F   +        K+   +L K   ++ + K G  PL +++  D+      LL  G   
Sbjct: 225 -FLDNNKILSKKEFKVLNFIL-KYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDI 282

Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE---------SKAGFTPLHLSAQEG 685
           + V+K+G T L  A K   +D+   +L+   KP            S+ G   L  +  E 
Sbjct: 283 YNVSKDGDTVLTYAIKHGNIDMLNRILQL--KPGKYLIKKTFEYFSEHGINDLFFN--EK 338

Query: 686 HTDMSSLLIEHGATV 700
              M  LL+++  T+
Sbjct: 339 KMLMMILLMQYSFTI 353

Length = 494

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 61.0 bits (148), Expect = 1e-09
 Identities = 65/290 (22%), Positives = 123/290 (42%), Gaps = 27/290 (9%)

Query: 540 IAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLA----AKYGRM-KIAQML 594
           I Q  LQ+D+P      +  +    GA++     +  TPL         Y  M  I ++L
Sbjct: 39  IFQKYLQRDSP---STDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKIL 95

Query: 595 LQKDAPVDSQGKNGVTPLHVASHYDHQN---VALLLLDRGASPHAVAKNGYTPLHIAAKK 651
           ++  A ++ +  +G TPL+      + N   + L +++ GA    + K+G+T L +  + 
Sbjct: 96  IENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQS 155

Query: 652 N---QMDIATTLLEYNAKPNAES-KAGFTPLHLSAQEGHT----DMSSLLIEHGATVSHQ 703
           N    ++I   LLE     N  + K  +  LH   +        D+  L +++G  ++ +
Sbjct: 156 NHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKE 215

Query: 704 AKNG-------LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMV 756
            K+        L  L    +  K N+    +F+  +I+ V + GF PL+ +       + 
Sbjct: 216 NKSHKKKFMEYLNSLLYDNKRFKKNILDF-IFSYIDINQVDELGFNPLYYSVSHNNRKIF 274

Query: 757 RYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLF 806
            YL++ G ++N  T LG T L  A +     I + +L      N  +  +
Sbjct: 275 EYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKNTISYTY 324

Length = 489

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 61.8 bits (150), Expect = 1e-09
 Identities = 49/178 (27%), Positives = 70/178 (39%), Gaps = 29/178 (16%)

Query: 287 LLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGC 346
           LL  K DP+     G TPLHIA  K     V +LLK+  ++     +G T L  A     
Sbjct: 544 LLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKH 603

Query: 347 MNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHV 406
             I   L    +  D         L  AA+ N    ++ LL+ G +VD+   +       
Sbjct: 604 HKIFRILYHFASISDPHA--AGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQ------- 654

Query: 407 ASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVD-ARAREDQTPL 463
                              G T L +A   +  D+VR+L+ NGA VD A   +D +P 
Sbjct: 655 -------------------GATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPT 693

Length = 823

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 61.4 bits (149), Expect = 1e-09
 Identities = 46/156 (29%), Positives = 65/156 (41%), Gaps = 7/156 (4%)

Query: 561 LTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDH 620
           L ++         KG TPLH+AA  G      +LL+    V  +  NG T L  A    H
Sbjct: 544 LLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKH 603

Query: 621 QNVALLL--LDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPL 678
             +  +L      + PHA        L  AAK+N +     LL+     ++E   G T L
Sbjct: 604 HKIFRILYHFASISDPHA----AGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATAL 659

Query: 679 HLSAQEGHTDMSSLLIEHGATVSH-QAKNGLTPLHL 713
            ++  E H DM  LLI +GA V      +  +P  L
Sbjct: 660 QVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTEL 695

Length = 823

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 60.9 bits (148), Expect = 2e-09
 Identities = 55/233 (23%), Positives = 78/233 (33%), Gaps = 61/233 (26%)

Query: 201 ASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLL-----DRKADP-- 253
           A + ++   T +L+           D  T LH  S      V   LL      RK+ P  
Sbjct: 60  AIENENLELTELLLNLSCRGA--VGD--TLLHAISLEYVDAVEAILLHLLAAFRKSGPLE 115

Query: 254 --NARALNGF----TPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGF----- 302
             N +  + F    T LH+A        +H  +  + K LL+R A   ARA   F     
Sbjct: 116 LANDQYTSEFTPGITALHLA--------AHRQNYEIVKLLLERGASVPARACGDFFVKSQ 167

Query: 303 ---------TPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLH----VASF------ 343
                    +PL+ A       +V LL +  A I      G T LH       F      
Sbjct: 168 GVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEE 227

Query: 344 --MGCMNIAIFLLQAGAAPDTATV-------RGETPLHLAARANQTDIVRILL 387
                 N   F L        +         +G TPL LAA+  +  + R+ L
Sbjct: 228 LSCQMYN---FALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKL 277

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 21/54 (38%), Positives = 29/54 (53%)

Query: 301 GFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLL 354
           G T LH A    R ++V+ LL+ G  I  T E G T LH+A+  G + +   LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 57.9 bits (139), Expect = 4e-09
 Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 11/178 (6%)

Query: 638 AKNGYTPLHIAAKKNQMDIATTLLEYNA--KPNAESKAGFTPLHLSAQEGHTDMSSLLIE 695
           +K   + L +  K     +   LL   +    N   K     L L+     +    LL  
Sbjct: 1   SKPSLSALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKL 60

Query: 696 HG-ATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLN 754
                ++ +  +G  PLH  A +    +  + + +GA+++     G TPLH+A+  G   
Sbjct: 61  IVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPP 120

Query: 755 -----MVRYLVENGA---NVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
                + + L+E GA     N     G TPLH A+  G   I++LLL AGA PN+  +
Sbjct: 121 EGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNS 178

Length = 235

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 59.9 bits (145), Expect = 4e-09
 Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 11/91 (12%)

Query: 284 AKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVAS- 342
           A+ LL   ADPN R  +G TPLHIAC     +VV +LL++GA      + G TPL +A  
Sbjct: 98  ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEE 157

Query: 343 ---------FMGCMNIAIFLLQAGAAPDTAT 364
                         +   F L A A PD+ T
Sbjct: 158 NGFREVVQLLSRH-SQCHFELGANAKPDSFT 187

Length = 664

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 59.5 bits (144), Expect = 5e-09
 Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 8/81 (9%)

Query: 243 AKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGF 302
           A+ LL   ADPN R  +G TPLHIAC           HV V + LL+  ADP     +G 
Sbjct: 98  ARILLTGGADPNCRDYDGRTPLHIACANG--------HVQVVRVLLEFGADPTLLDKDGK 149

Query: 303 TPLHIACKKNRYKVVELLLKY 323
           TPL +A +    +VV+LL ++
Sbjct: 150 TPLELAEENGFREVVQLLSRH 170

Length = 664

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 52.7 bits (127), Expect = 5e-09
 Identities = 22/55 (40%), Positives = 28/55 (50%)

Query: 287 LLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVA 341
           L     D NA   NG TPLH+A K    ++V+ LLK G  +      GLT L +A
Sbjct: 2   LEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 52.2 bits (126), Expect = 6e-09
 Identities = 23/54 (42%), Positives = 35/54 (64%)

Query: 740 GFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
           G T LH A+  G+L +V+YL+E G ++N T   G T LH A++ G + ++ LLL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 58.3 bits (141), Expect = 1e-08
 Identities = 46/175 (26%), Positives = 64/175 (36%), Gaps = 28/175 (16%)

Query: 317 VELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAAR 376
           +E LLK           G TPLH+A+  G  +  + LL+           G T L  A  
Sbjct: 541 LEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAIS 600

Query: 377 ANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARA 436
           A    I RIL                          F+S S            L  AA+ 
Sbjct: 601 AKHHKIFRILY------------------------HFASISDPHA----AGDLLCTAAKR 632

Query: 437 NQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKD 491
           N    ++ LL+ G +VD+   +  T L VA    + D+  LL+ +GA VD    D
Sbjct: 633 NDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTD 687

Length = 823

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 51.9 bits (125), Expect = 2e-08
 Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 42/124 (33%)

Query: 2   QQGHDRVVAVLLEN--DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTK 59
           + G+  +V +LLE   D        ALH+AA+                            
Sbjct: 6   KNGNLELVKLLLEKGADVNLGDTDTALHLAARN--------------------------- 38

Query: 60  LEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGG 119
                        G  E+ K+L+++GA +N +  +G T L++AA+  +  +V+ LL  G 
Sbjct: 39  -------------GNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGA 85

Query: 120 NQTL 123
           +  L
Sbjct: 86  DINL 89

Length = 91

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 58.0 bits (140), Expect = 2e-08
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 431 HLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTK 490
            LAA  +     RILL  GA  + R  + +TPLH+A   G+  +  +LL+ GA      K
Sbjct: 88  QLAASGDAVGA-RILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDK 146

Query: 491 DGYTALHISAKEGQDEVASIL 511
           DG T L ++ + G  EV  +L
Sbjct: 147 DGKTPLELAEENGFREVVQLL 167

Length = 664

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 57.6 bits (139), Expect = 2e-08
 Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 27/110 (24%)

Query: 372 HLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLH 431
            LAA  +     RILL  GA  + R  + +TPLH+A                        
Sbjct: 88  QLAASGDAVGA-RILLTGGADPNCRDYDGRTPLHIACANGHVQ----------------- 129

Query: 432 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQH 481
                    +VR+LL  GA      ++ +TPL +A   G  ++  LL +H
Sbjct: 130 ---------VVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRH 170

Length = 664

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 57.2 bits (138), Expect = 3e-08
 Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 24/209 (11%)

Query: 538 MKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 597
           + +  +L       D     +++LT     + +T         L AK             
Sbjct: 507 LNVGDLLGDNGGEHDDPNMASNLLT-----VASTGNAALLEELLKAK------------L 549

Query: 598 DAPV-DSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDI 656
           D  + DS+G+   TPLH+A+   +++  L+LL    + H    NG T L  A       I
Sbjct: 550 DPDIGDSKGR---TPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKI 606

Query: 657 ATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQ 716
              L  + +  +    A    L  +A+         L++ G  V  +   G T L +   
Sbjct: 607 FRILYHFASISDPH--AAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMA 664

Query: 717 EDKVNVATITMFNGAEIDPV-TKAGFTPL 744
           ED V++  + + NGA++D   T   F+P 
Sbjct: 665 EDHVDMVRLLIMNGADVDKANTDDDFSPT 693

Length = 823

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 56.3 bits (136), Expect = 4e-08
 Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 44/273 (16%)

Query: 240 VRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARAL 299
           +++ K L+D  AD N +     TPL  A  +NR  +S+     + K LL   AD N +  
Sbjct: 50  IKIVKLLIDNGADVNYKGYIE-TPL-CAVLRNREITSN-KIKKIVKLLLKFGADINLKTF 106

Query: 300 NGFTPLHIAC-----KKNRYKVVELLLKYGASIAATTE-SGLTPLHV--ASFMGCMNIAI 351
           NG +P  I C       N   ++  LL  G ++       G   LH+   SF    ++  
Sbjct: 107 NGVSP--IVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIK 164

Query: 352 FLLQAGAAP-DTATVRGETPLHLAARANQTDIVRI-----LLRNGASVDARAREDQTPLH 405
            LL  G    +  ++ G TP+++  R N  D++ I     L++ G ++     E      
Sbjct: 165 ILLSFGVNLFEKTSLYGLTPMNIYLR-NDIDVISIKVIKYLIKKGVNI-----ETNNNGS 218

Query: 406 VASRLRRFSSASQSALTR------------------VRGETPLHLAARANQTDIVRILLR 447
             S L  F   ++    +                   +G  PL ++A+ +  +    LL+
Sbjct: 219 -ESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLK 277

Query: 448 NGASVDARAREDQTPLHVASRLGNGDIASLLLQ 480
            G  +   +++  T L  A + GN D+ + +LQ
Sbjct: 278 LGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQ 310

Length = 494

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 49.5 bits (119), Expect = 5e-08
 Identities = 22/54 (40%), Positives = 33/54 (61%)

Query: 492 GYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           G TALH +A  G+ E+   L E G  I  T + G T LH+AA+ G +++ ++LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 56.4 bits (136), Expect = 5e-08
 Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 2/117 (1%)

Query: 580 HLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAK 639
            LAA  G    A++LL   A  + +  +G TPLH+A    H  V  +LL+ GA P  + K
Sbjct: 88  QLAAS-GDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDK 146

Query: 640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH 696
           +G TPL +A +    ++   L  + ++ + E  A   P   + +    + S +   H
Sbjct: 147 DGKTPLELAEENGFREVVQLLSRH-SQCHFELGANAKPDSFTGKPPSLEDSPISSHH 202

Length = 664

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 55.6 bits (134), Expect = 8e-08
 Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 5/159 (3%)

Query: 622 NVALL--LLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLH 679
           N ALL  LL     P      G TPLHIAA K   D    LL++    +     G T L 
Sbjct: 537 NAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALW 596

Query: 680 LSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKA 739
            +    H  +  +L  H A++S     G   L   A+ + +      +  G  +D     
Sbjct: 597 NAISAKHHKIFRIL-YHFASISDPHAAG-DLLCTAAKRNDLTAMKELLKQGLNVDSEDHQ 654

Query: 740 GFTPLHIASHFGQLNMVRYLVENGANVN-ATTNLGYTPL 777
           G T L +A     ++MVR L+ NGA+V+ A T+  ++P 
Sbjct: 655 GATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPT 693

Length = 823

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 18/52 (34%), Positives = 30/52 (57%)

Query: 428 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLL 479
           T LH AA + + ++V+ LL  G  ++    +  T LH+A+  GN ++  LLL
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 8/62 (12%)

Query: 260 GFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVEL 319
           G T LH A    R +        + K LL++  D N    +G T LHIA +    +V++L
Sbjct: 1   GRTALHKAAISGRLE--------LVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKL 52

Query: 320 LL 321
           LL
Sbjct: 53  LL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 20/54 (37%), Positives = 32/54 (59%)

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLL 628
           G T LH AA  GR+++ + LL+K   ++   ++G T LH+A+   +  V  LLL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 17/71 (23%)

Query: 525 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK 584
           G T LH AA  GR+++ + LL+K                 G  I  T + G T LH+AA+
Sbjct: 1   GRTALHKAAISGRLELVKYLLEK-----------------GVDINRTDEDGNTALHIAAE 43

Query: 585 YGRMKIAQMLL 595
            G +++ ++LL
Sbjct: 44  NGNLEVLKLLL 54

Length = 54

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 55.3 bits (133), Expect = 1e-07
 Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 1/104 (0%)

Query: 624 ALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQ 683
           A +LL  GA P+    +G TPLHIA     + +   LLE+ A P    K G TPL L+ +
Sbjct: 98  ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEE 157

Query: 684 EGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM 727
            G  ++  LL  H         N   P     +   +  + I+ 
Sbjct: 158 NGFREVVQLLSRHSQCHFELGANA-KPDSFTGKPPSLEDSPISS 200

Length = 664

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 54.9 bits (132), Expect = 1e-07
 Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 9/105 (8%)

Query: 475 ASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAK 534
           A +LL  GA  +    DG T LHI+   G  +V  +L E GA  T   K G TPL LA +
Sbjct: 98  ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEE 157

Query: 535 YGRMKIAQMLLQ---------KDAPVDSQGKVASILTESGASITA 570
            G  ++ Q+L +          +A  DS       L +S  S   
Sbjct: 158 NGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDSPISSHH 202

Length = 664

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 16/32 (50%), Positives = 22/32 (68%)

Query: 740 GFTPLHIASHFGQLNMVRYLVENGANVNATTN 771
           G TPLH+A+  G L +V+ L+E GA+VNA   
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 54.5 bits (131), Expect = 2e-07
 Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 12/139 (8%)

Query: 57  NTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQE---NHDGVVRY 113
           +T L   LSN K +     ++ KIL++NGA IN ++ +G TPLY        N+  ++ +
Sbjct: 72  STPLCTILSNIK-DYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLF 130

Query: 114 LLSKGGNQTLATEHNITPLHVACKWG---KVAMVELLISKGANIEA-KTRDGLTPLHCAA 169
           ++  G + TL  +   T L V  +      + +++LL+ KG +I     ++    LHC  
Sbjct: 131 MIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYF 190

Query: 170 RSGHD----NVIDILIEKG 184
           +   D    +++ + ++ G
Sbjct: 191 KYNIDRIDADILKLFVDNG 209

Length = 489

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 54.5 bits (131), Expect = 2e-07
 Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 25/219 (11%)

Query: 1   MQ-QGHDRVVAVLLENDTKGKVKLPALHIA-------AKKDDCKAAALLLEV-SFSNTKL 51
           MQ +  D VV  +L+N  +   +L  L++         + DD   A+ LL V S  N  L
Sbjct: 483 MQTRQEDNVV--ILKNFLQHHKELHDLNVGDLLGDNGGEHDDPNMASNLLTVASTGNAAL 540

Query: 52  EVSLSNTKLEVSLSNTKFE-------ATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQ 104
              L   KL+  + ++K         + G E+   +L+ +   ++++  NG T L+ A  
Sbjct: 541 LEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAIS 600

Query: 105 ENHDGVVR--YLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGL 162
             H  + R  Y  +   +   A +     L  A K   +  ++ L+ +G N++++   G 
Sbjct: 601 AKHHKIFRILYHFASISDPHAAGD----LLCTAAKRNDLTAMKELLKQGLNVDSEDHQGA 656

Query: 163 TPLHCAARSGHDNVIDILIEKGAAL-YSKTKNGLAPLHM 200
           T L  A    H +++ +LI  GA +  + T +  +P  +
Sbjct: 657 TALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTEL 695

Length = 823

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 53.9 bits (129), Expect = 2e-07
 Identities = 70/271 (25%), Positives = 107/271 (39%), Gaps = 34/271 (12%)

Query: 89  NVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVAC--KWGKVAMVEL 146
           N+ S   +  LY      +  V R +L     Q +    N   LH  C  K      VE 
Sbjct: 3   NIMSAEYYLSLYAKYNSKNLDVFRNML-----QAIEPSGNYHILHAYCGIKGLDERFVEE 57

Query: 147 LISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDH 206
           L+ +G +      DG  PLH A++  ++ ++ +L+  GA   +  K    PL+  S  D 
Sbjct: 58  LLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDD 117

Query: 207 EAATRV--LIYHGA----GVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNG 260
           E   R+  L+ +GA     VDE     L A    S     RV K ++    +  AR ++ 
Sbjct: 118 EVIERINLLVQYGAKINNSVDEEGCGPLLACTDPSE----RVFKKIMSIGFE--ARIVDK 171

Query: 261 FTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN--RYKVVE 318
           F   HI    +R+  S          ++     P+    +G TPLHI C K      ++ 
Sbjct: 172 FGKNHI----HRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIIN 227

Query: 319 LLL---------KYGASIAATTESGLTPLHV 340
           LLL         K+G S        L+P H+
Sbjct: 228 LLLPSTDVNKQNKFGDSPLTLLIKTLSPAHL 258

Length = 446

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 54.5 bits (131), Expect = 2e-07
 Identities = 43/144 (29%), Positives = 61/144 (42%), Gaps = 9/144 (6%)

Query: 504 QDEVASILTESGASITATTKKGFTPLHLAAKYGRMK--IAQML----LQKDAPVDSQGKV 557
           Q+E+A I T    ++ AT  K  TP H       +   +A ML     Q  A  D+ G  
Sbjct: 41  QEEIARIDTHL-EALEATENKDATPDHNLTTEEVIDPVVAHMLTVELCQLAASGDAVG-- 97

Query: 558 ASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASH 617
           A IL   GA        G TPLH+A   G +++ ++LL+  A      K+G TPL +A  
Sbjct: 98  ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEE 157

Query: 618 YDHQNVALLLLDRGASPHAVAKNG 641
              + V  LL         +  N 
Sbjct: 158 NGFREVVQLLSRHSQCHFELGANA 181

Length = 664

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 594 LLQKDAP-VDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIA 648
           LL+     +++   NG TPLH+A+ Y    +   LL  G   +    +G T L +A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 54.1 bits (130), Expect = 3e-07
 Identities = 47/184 (25%), Positives = 73/184 (39%), Gaps = 21/184 (11%)

Query: 463 LHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATT 522
           L VAS  GN  +   LL+     D     G T LHI+A +G ++   +L +   ++    
Sbjct: 530 LTVAS-TGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRD 588

Query: 523 KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLA 582
             G T L  A      KI ++L    +  D           +   +          L  A
Sbjct: 589 ANGNTALWNAISAKHHKIFRILYHFASISDPH---------AAGDL----------LCTA 629

Query: 583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGAS-PHAVAKNG 641
           AK   +   + LL++   VDS+   G T L VA   DH ++  LL+  GA    A   + 
Sbjct: 630 AKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDD 689

Query: 642 YTPL 645
           ++P 
Sbjct: 690 FSPT 693

Length = 823

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 54.1 bits (130), Expect = 3e-07
 Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 712 HLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTN 771
            L A  D V  A I +  GA+ +     G TPLHIA   G + +VR L+E GA+      
Sbjct: 88  QLAASGDAVG-ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDK 146

Query: 772 LGYTPLHQASQQGRVLIIDLLLG 794
            G TPL  A + G   ++ LL  
Sbjct: 147 DGKTPLELAEENGFREVVQLLSR 169

Length = 664

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 53.7 bits (129), Expect = 3e-07
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 317 VELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAAR 376
             +LL  GA        G TPLH+A   G + +   LL+ GA P      G+TPL LA  
Sbjct: 98  ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEE 157

Query: 377 ANQTDIVRILLRNGA---SVDARAREDQ 401
               ++V++L R+      + A A+ D 
Sbjct: 158 NGFREVVQLLSRHSQCHFELGANAKPDS 185

Length = 664

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 47.7 bits (114), Expect = 3e-07
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 353 LLQAG-AAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVA 407
           LL+ G    +     G TPLHLAA+    ++V+ LL+ G  ++ R  +  T L +A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 16/43 (37%), Positives = 27/43 (62%)

Query: 738 KAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQA 780
             G TPLH+A+ +G L +V++L++ G ++N   + G T L  A
Sbjct: 14  GNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 17/30 (56%), Positives = 22/30 (73%)

Query: 367 GETPLHLAARANQTDIVRILLRNGASVDAR 396
           G TPLHLAAR    ++V++LL  GA V+AR
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNAR 31

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 17/30 (56%), Positives = 22/30 (73%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDAR 455
           G TPLHLAAR    ++V++LL  GA V+AR
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNAR 31

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 47.2 bits (113), Expect = 4e-07
 Identities = 17/54 (31%), Positives = 28/54 (51%)

Query: 608 GVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLL 661
           G T LH A+      +   LL++G   +   ++G T LHIAA+   +++   LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 53.4 bits (128), Expect = 4e-07
 Identities = 25/70 (35%), Positives = 36/70 (51%)

Query: 111 VRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAAR 170
            R LL+ G +         TPLH+AC  G V +V +L+  GA+     +DG TPL  A  
Sbjct: 98  ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEE 157

Query: 171 SGHDNVIDIL 180
           +G   V+ +L
Sbjct: 158 NGFREVVQLL 167

Length = 664

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 46.8 bits (112), Expect = 5e-07
 Identities = 17/54 (31%), Positives = 30/54 (55%)

Query: 161 GLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLI 214
           G T LH AA SG   ++  L+EKG  +    ++G   LH+A++  +    ++L+
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 52.7 bits (127), Expect = 6e-07
 Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 16/120 (13%)

Query: 81  LVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGK 140
           L+  G +IN ++  G TPL+ AA  N+    R L++ G +    +    TPL +  +   
Sbjct: 243 LLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNN 302

Query: 141 VAMVELLISKGANIE--AKTRDGLTPLHCAARSGHDNVID--------ILIEKGAALYSK 190
              V   ++K  + E  A T      L+ A+ +G D   D        +++    +L  +
Sbjct: 303 GRAVRAALAKNPSAETVAAT------LNTASVAGGDIPSDATRLCVAKVVLRGAFSLLPE 356

Length = 471

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 46.6 bits (111), Expect = 6e-07
 Identities = 17/45 (37%), Positives = 26/45 (57%)

Query: 422 TRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVA 466
           T   G TPLHLAA+    ++V+ LL+ G  ++ R  +  T L +A
Sbjct: 12  TDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 46.5 bits (111), Expect = 7e-07
 Identities = 18/54 (33%), Positives = 30/54 (55%)

Query: 641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
           G T LH AA   ++++   LLE     N   + G T LH++A+ G+ ++  LL+
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 46.0 bits (110), Expect = 7e-07
 Identities = 14/33 (42%), Positives = 22/33 (66%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKYGASIAATTE 332
           +G TPLH+A +    +VV+LLL+ GA + A  +
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 52.0 bits (125), Expect = 1e-06
 Identities = 45/170 (26%), Positives = 64/170 (37%), Gaps = 35/170 (20%)

Query: 608 GVTPLHVASHYDHQNVALLLLDRGASPHAVAK--------------NGYTPLHIAAKKNQ 653
           G+T LH+A+H  +  +  LLL+RGAS  A A               +G +PL+ AA    
Sbjct: 128 GITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGS 187

Query: 654 MDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPL-- 711
             I   L E  A        G T LHL   E   +  +   E    +S Q  N    L  
Sbjct: 188 PSIVALLSEDPADILTADSLGNTLLHLLVME--NEFKAEYEE----LSCQMYNFALSLLD 241

Query: 712 HLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE 761
            L    D   +  I              G TPL +A+  G++ + R  + 
Sbjct: 242 KLR---DSKELEVILNHQ----------GLTPLKLAAKEGRIVLFRLKLA 278

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 51.2 bits (122), Expect = 1e-06
 Identities = 76/327 (23%), Positives = 124/327 (37%), Gaps = 68/327 (20%)

Query: 442 VRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAK 501
           V  LL  G S +    +   PLH+AS++ N  I ++LL HGA  +A  K   T L+  + 
Sbjct: 55  VEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSG 114

Query: 502 EGQD--EVASILTESGASI-TATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
              +  E  ++L + GA I  +  ++G  PL              L   D       K+ 
Sbjct: 115 TDDEVIERINLLVQYGAKINNSVDEEGCGPL--------------LACTDPSERVFKKIM 160

Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY 618
           SI  E+                +  K+G+  I +                    H+ S  
Sbjct: 161 SIGFEA---------------RIVDKFGKNHIHR--------------------HLMSDN 185

Query: 619 DHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKN--QMDIATTLLEYNAKPNAESKAGFT 676
              +    ++  G SP     +G TPLHI   K    +DI   LL  +   N ++K G +
Sbjct: 186 PKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDS 244

Query: 677 PLHLSAQE-GHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDP 735
           PL L  +      + + L+     ++ Q  N      +C   D+ +V  I    G + D 
Sbjct: 245 PLTLLIKTLSPAHLINKLLSTSNVITDQTVN------ICIFYDRDDVLEIINDKGKQYDS 298

Query: 736 VTKAGFTPLHIASHFGQLNMVRYLVEN 762
                 T   +A   G +  V+YL++N
Sbjct: 299 ------TDFKMAVEVGSIRCVKYLLDN 319

Length = 446

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 8/62 (12%)

Query: 227 YLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKT 286
             TALH A+  G + + K LL++  D N    +G T LHIA +          ++ V K 
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAEN--------GNLEVLKL 52

Query: 287 LL 288
           LL
Sbjct: 53  LL 54

Length = 54

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 51.7 bits (124), Expect = 1e-06
 Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 13/146 (8%)

Query: 54  SLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTP----LYMAAQENHDG 109
               T L   L N +  +   +++ K+L+  GA IN+++ NG +P    +Y +   N D 
Sbjct: 67  GYIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCD- 125

Query: 110 VVRYLLSKGGNQTLATEH---NITPLHVACKWGKVAMVELLISKGANI-EAKTRDGLTPL 165
           ++R+LLSKG N          N+  +++     K  ++++L+S G N+ E  +  GLTP+
Sbjct: 126 MLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPM 185

Query: 166 HCAARSGHDN----VIDILIEKGAAL 187
           +   R+  D     VI  LI+KG  +
Sbjct: 186 NIYLRNDIDVISIKVIKYLIKKGVNI 211

Length = 494

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 20/51 (39%), Positives = 30/51 (58%)

Query: 461 TPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASIL 511
           T LH A+  G  ++   LL+ G  ++   +DG TALHI+A+ G  EV  +L
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLL 53

Length = 54

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 50.9 bits (122), Expect = 2e-06
 Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 17/143 (11%)

Query: 678 LHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCA-------QEDKV-NVATITMFN 729
           L+L  ++    +  LLI++GA V+++   G     LCA         +K+  +  + +  
Sbjct: 41  LYLKRKDVKIKIVKLLIDNGADVNYK---GYIETPLCAVLRNREITSNKIKKIVKLLLKF 97

Query: 730 GAEIDPVTKAGFTPLHI---ASHFGQLNMVRYLVENGANVNATTNL-GYTPLHQ--ASQQ 783
           GA+I+  T  G +P+      S+    +M+R+L+  G NVN   N  GY  LH    S  
Sbjct: 98  GADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFS 157

Query: 784 GRVLIIDLLLGAGAQPNATTNLF 806
            +  +I +LL  G      T+L+
Sbjct: 158 VKKDVIKILLSFGVNLFEKTSLY 180

Length = 494

>gnl|CDD|165212 PHA02884, PHA02884, ankyrin repeat protein; Provisional

 Score = 50.0 bits (119), Expect = 2e-06
 Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 8/123 (6%)

Query: 59  KLEVSLSNTKFEATGQEEVAKILVDNGATINVQ---SLNGFT-PLYMAAQENHDGVVRYL 114
              +  S+ KF  T   ++   ++  GA        S N  T PL  A   ++D   + L
Sbjct: 33  IANILYSSIKFHYT---DIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLL 89

Query: 115 LSKGGN-QTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGH 173
           +  G +    A E  ITPL+++   G +  +E+L+S GA+I  +T D +TP+  A    +
Sbjct: 90  IRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICN 149

Query: 174 DNV 176
           + +
Sbjct: 150 NFL 152

Length = 300

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 50.1 bits (119), Expect = 3e-06
 Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 17/200 (8%)

Query: 589 KIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIA 648
           +  + LL +    +    +G  PLH+AS  ++  +  +LL  GA P+A  K   TPL+  
Sbjct: 53  RFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYL 112

Query: 649 AKKNQ--MDIATTLLEYNAK-PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA- 704
           +  +   ++    L++Y AK  N+  + G  PL        TD S  + +   ++  +A 
Sbjct: 113 SGTDDEVIERINLLVQYGAKINNSVDEEGCGPLLAC-----TDPSERVFKKIMSIGFEAR 167

Query: 705 ---KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVT--KAGFTPLHI--ASHFGQLNMVR 757
              K G   +H     D    +TI+      I P      G TPLHI  +     ++++ 
Sbjct: 168 IVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIIN 227

Query: 758 YLVENGANVNATTNLGYTPL 777
            L+ +  +VN     G +PL
Sbjct: 228 LLLPS-TDVNKQNKFGDSPL 246

Length = 446

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 19/55 (34%), Positives = 25/55 (45%)

Query: 626 LLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHL 680
           LL       +A   NG TPLH+AAK   +++   LL+     N     G T L L
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDL 55

Length = 56

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 17/54 (31%), Positives = 29/54 (53%)

Query: 334 GLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILL 387
           G T LH A+  G + +  +LL+ G   +     G T LH+AA     +++++LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 50.3 bits (120), Expect = 4e-06
 Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 17/102 (16%)

Query: 508 ASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGAS 567
           A IL   GA        G TPLH+A   G +++ ++LL                 E GA 
Sbjct: 98  ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLL-----------------EFGAD 140

Query: 568 ITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGV 609
            T   K G TPL LA + G  ++ Q+L +        G N  
Sbjct: 141 PTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAK 182

Length = 664

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 49.9 bits (119), Expect = 4e-06
 Identities = 21/57 (36%), Positives = 29/57 (50%)

Query: 353 LLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR 409
           LL  GA P+     G TPLH+A       +VR+LL  GA      ++ +TPL +A  
Sbjct: 101 LLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEE 157

Length = 664

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 8/63 (12%)

Query: 246 LLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPL 305
           L     D NA   NG TPLH+A K           + + + LL    D N R  +G T L
Sbjct: 2   LEHGPIDLNATDGNGNTPLHLAAK--------YGALELVQWLLKPGVDLNLRDSDGLTAL 53

Query: 306 HIA 308
            +A
Sbjct: 54  DLA 56

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 12/33 (36%), Positives = 22/33 (66%)

Query: 127 HNITPLHVACKWGKVAMVELLISKGANIEAKTR 159
              TPLH+A + G + +V+LL+  GA++ A+ +
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional

 Score = 47.9 bits (114), Expect = 5e-06
 Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 26/133 (19%)

Query: 110 VVRYLLSKGGNQTLATEH-NITPLHVACKWGK---VAMVELLISKGANIEAKTRDGLTPL 165
           ++++L+  G +    T   N++ LH    + K     ++++LI  G++I  +  DG   L
Sbjct: 68  ILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLL 127

Query: 166 H-----CAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGV 220
           H        R    NVI +LI+ G +  +K  +    L+             +++H    
Sbjct: 128 HMYMCNFNVRI---NVIKLLIDSGVSFLNKDFDNNNILY-----------SYILFHS--- 170

Query: 221 DEITVDYLTALHV 233
           D+   D+LT+L +
Sbjct: 171 DKKIFDFLTSLGI 183

Length = 209

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 49.3 bits (118), Expect = 7e-06
 Identities = 46/229 (20%), Positives = 79/229 (34%), Gaps = 44/229 (19%)

Query: 641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD----MSSLLIEH 696
           G + L +AA +N+    T LL   +   A    G T LH  + E        +  LL   
Sbjct: 52  GRSALFVAAIENENLELTELLLNLSCRGAV---GDTLLHAISLEYVDAVEAILLHLLAAF 108

Query: 697 GATVSHQAKN---------GLTPLHLCAQEDKVNVATITMFNGAEI-------DPVTKAG 740
             +   +  N         G+T LHL A      +  + +  GA +         V   G
Sbjct: 109 RKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQG 168

Query: 741 FT-------PLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLH------QASQQGRVL 787
                    PL+ A+  G  ++V  L E+ A++    +LG T LH      +   +   L
Sbjct: 169 VDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEEL 228

Query: 788 II---DLLLGAGAQPNATTNLFCCATILVKNGAEIDPVTKLSDEHEKSI 833
                +  L    +   +  L      ++ N   + P+   + E    +
Sbjct: 229 SCQMYNFALSLLDKLRDSKEL-----EVILNHQGLTPLKLAAKEGRIVL 272

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 49.1 bits (117), Expect = 7e-06
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 199 HMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARAL 258
            +A+ GD   A R+L+  GA  +    D  T LH+A   GHV+V + LL+  ADP     
Sbjct: 88  QLAASGDAVGA-RILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDK 146

Query: 259 NGFTPLHIACKKNR 272
           +G TPL +A +   
Sbjct: 147 DGKTPLELAEENGF 160

Length = 664

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 48.9 bits (116), Expect = 8e-06
 Identities = 62/265 (23%), Positives = 104/265 (39%), Gaps = 21/265 (7%)

Query: 353 LLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVAS---- 408
           LL  G +P+     G  PLH+A++ N   IV +LL +GA  +A  ++ +TPL+  S    
Sbjct: 58  LLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDD 117

Query: 409 -------RLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNG--ASVDARARED 459
                   L ++ +   +++    G  PL LA       + + ++  G  A +  +  ++
Sbjct: 118 EVIERINLLVQYGAKINNSVDE-EGCGPL-LACTDPSERVFKKIMSIGFEARIVDKFGKN 175

Query: 460 QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASI-LTESGASI 518
               H+ S        S +++ G S   P  DG T LHI   +    V  I L      +
Sbjct: 176 HIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLPSTDV 235

Query: 519 TATTKKGFTPLHLAAK-YGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKG-- 575
               K G +PL L  K      +   LL     +  Q     I  +    +     KG  
Sbjct: 236 NKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQ 295

Query: 576 --FTPLHLAAKYGRMKIAQMLLQKD 598
              T   +A + G ++  + LL  D
Sbjct: 296 YDSTDFKMAVEVGSIRCVKYLLDND 320

Length = 446

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 48.5 bits (116), Expect = 1e-05
 Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 22/155 (14%)

Query: 693 LIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQ 752
           +I       +  K  + PL+L  +   ++V  I + NGA+I+  TK   TPLH  S+   
Sbjct: 21  IIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKY 80

Query: 753 -----LNMVRYLVENGANVNATTNLGYTPLHQASQQ--GRVLIIDLLLGAGAQPNATTN- 804
                  +V+ L+E GANVNA  N G TPL  A  +      I++ LL  GA  N   + 
Sbjct: 81  NLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSD 140

Query: 805 --------LFCCAT------ILVKNGAEIDPVTKL 825
                   L           +L+  G +I+   ++
Sbjct: 141 GENLLHLYLESNKIDLKILKLLIDKGVDINAKNRV 175

Length = 422

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 49.1 bits (117), Expect = 1e-05
 Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 12/143 (8%)

Query: 660 LLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDK 719
           LL+    P+     G TPLH++A +G+ D   +L++H   V  +  NG T     A  + 
Sbjct: 544 LLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNT-----ALWNA 598

Query: 720 VNVATITMFN-----GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGY 774
           ++     +F       +  DP   A    L  A+    L  ++ L++ G NV++  + G 
Sbjct: 599 ISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGA 656

Query: 775 TPLHQASQQGRVLIIDLLLGAGA 797
           T L  A  +  V ++ LL+  GA
Sbjct: 657 TALQVAMAEDHVDMVRLLIMNGA 679

Length = 823

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 19/54 (35%), Positives = 30/54 (55%)

Query: 95  GFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLI 148
           G T L+ AA      +V+YLL KG +     E   T LH+A + G + +++LL+
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 147 LISKG-ANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMA 201
           L+  G  ++ A   +G TPLH AA+ G   ++  L++ G  L  +  +GL  L +A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 114 LLSKGGNQTLAT-EHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCA 168
           LL  G     AT  +  TPLH+A K+G + +V+ L+  G ++  +  DGLT L  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 14/33 (42%), Positives = 24/33 (72%)

Query: 524 KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGK 556
            G TPLHLAA+ G +++ ++LL+  A V+++ K
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 14/33 (42%), Positives = 24/33 (72%)

Query: 574 KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGK 606
            G TPLHLAA+ G +++ ++LL+  A V+++ K
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           +G TPLH+AA+   +++   LLE  A  NA  K
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 15/31 (48%), Positives = 22/31 (70%)

Query: 460 QTPLHVASRLGNGDIASLLLQHGASVDAPTK 490
            TPLH+A+R G+ ++  LLL+ GA V+A  K
Sbjct: 3   NTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 9/130 (6%)

Query: 76  EVAKILVDNGATINVQSL-NGFTPL--YMAAQEN-HDGVVRYLLSKGGNQTLATEHNITP 131
           E+ K L++NGA +N ++  N  + L  Y++  +N    +++ L+  G + T   E     
Sbjct: 67  EILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNL 126

Query: 132 LHV-ACKWG-KVAMVELLISKGANIEAKTRDGLTPLHC--AARSGHDNVIDILIEKGAAL 187
           LH+  C +  ++ +++LLI  G +   K  D    L+      S    + D L   G  +
Sbjct: 127 LHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHS-DKKIFDFLTSLGIDI 185

Query: 188 YSKTKNGLAP 197
               K+G   
Sbjct: 186 NETNKSGYNC 195

Length = 209

>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 14/102 (13%)

Query: 709 TPLHLCAQEDKVNVATITMF--NGAEIDPVTKA-GFTPLHIASHFGQLN------MVRYL 759
           TP+  C ++DKVNV  +     NGA+++  T+    + LH   H+   N      +++ L
Sbjct: 53  TPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALH---HYLSFNKNVEPEILKIL 109

Query: 760 VENGANVNATTNLGYTPLHQ--ASQQGRVLIIDLLLGAGAQP 799
           +++G+++      G   LH    +   R+ +I LL+ +G   
Sbjct: 110 IDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSF 151

Length = 209

>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 10/83 (12%)

Query: 126 EHNITPLHVAC---KWGKVAMVELLISKGANIEAKTRD-GLTPLHCAARSGHDNV----I 177
           +   TP+  +C       V +++ LI  GA++  KTRD  L+ LH    S + NV    +
Sbjct: 49  DLYETPIF-SCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALH-HYLSFNKNVEPEIL 106

Query: 178 DILIEKGAALYSKTKNGLAPLHM 200
            ILI+ G+++  + ++G   LHM
Sbjct: 107 KILIDSGSSITEEDEDGKNLLHM 129

Length = 209

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKYGASI 327
           +G TPLH+A +    +VV+LLL  GA I
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADI 28

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 17/54 (31%), Positives = 26/54 (48%)

Query: 194 GLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLL 247
           G   LH A+        + L+  G  ++    D  TALH+A+  G++ V K LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 445 LLRNG-ASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHI 498
           LL +G   ++A      TPLH+A++ G  ++   LL+ G  ++    DG TAL +
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDL 55

Length = 56

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 19/56 (33%), Positives = 28/56 (50%)

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLA 374
           LL      + AT  +G TPLH+A+  G + +  +LL+ G   +     G T L LA
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 21/56 (37%), Positives = 33/56 (58%)

Query: 560 ILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVA 615
           +L      + AT   G TPLHLAAKYG +++ Q LL+    ++ +  +G+T L +A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 17/33 (51%), Positives = 24/33 (72%)

Query: 160 DGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           DG TPLH AAR+GH  V+ +L+E GA + ++ K
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 47.6 bits (113), Expect = 3e-05
 Identities = 30/79 (37%), Positives = 43/79 (54%)

Query: 71  ATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNIT 130
           A+G    A+IL+  GA  N +  +G TPL++A    H  VVR LL  G + TL  +   T
Sbjct: 91  ASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKT 150

Query: 131 PLHVACKWGKVAMVELLIS 149
           PL +A + G   +V+LL  
Sbjct: 151 PLELAEENGFREVVQLLSR 169

Length = 664

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 47.2 bits (112), Expect = 3e-05
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 13/143 (9%)

Query: 74  QEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLH 133
           QEE+A+I     A    ++ +      +  +E  D VV ++L+    Q  A+        
Sbjct: 41  QEEIARIDTHLEALEATENKDATPDHNLTTEEVIDPVVAHMLTVELCQLAAS-------- 92

Query: 134 VACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKN 193
                G      +L++ GA+   +  DG TPLH A  +GH  V+ +L+E GA      K+
Sbjct: 93  -----GDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKD 147

Query: 194 GLAPLHMASQGDHEAATRVLIYH 216
           G  PL +A +       ++L  H
Sbjct: 148 GKTPLELAEENGFREVVQLLSRH 170

Length = 664

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 660 LLEY-NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHL 713
           LLE+     NA    G TPLHL+A+ G  ++   L++ G  ++ +  +GLT L L
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDL 55

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query: 229 TALHVASHCGHVRVAKTLLDRKADPNAR 256
           T LH+A+  GH+ V K LL+  AD NAR
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAR 31

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 14/29 (48%), Positives = 22/29 (75%)

Query: 740 GFTPLHIASHFGQLNMVRYLVENGANVNA 768
           G TPLH+A+  G L +V+ L++ GA++NA
Sbjct: 2   GRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|165103 PHA02736, PHA02736, Viral ankyrin protein; Provisional

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 12/85 (14%)

Query: 244 KTLLDRKADPNAR-ALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGF 302
           K L++  AD N +  + G TPLHIA     Y+        +A  L   +   N   LN  
Sbjct: 75  KLLMEWGADINGKERVFGNTPLHIAVYTQNYE--------LATWLC-NQPGVNMEILNYA 125

Query: 303 --TPLHIACKKNRYKVVELLLKYGA 325
             TP ++AC+++  K++ +L   GA
Sbjct: 126 FKTPYYVACERHDAKMMNILRAKGA 150

Length = 154

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 41.6 bits (98), Expect = 4e-05
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 229 TALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIA 267
           T LH+A+  G + + + LL    D N R  +G T L +A
Sbjct: 18  TPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 41.6 bits (98), Expect = 4e-05
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 478 LLQHG-ASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLA 532
           LL+HG   ++A   +G T LH++AK G  E+   L + G  +      G T L LA
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 16/54 (29%), Positives = 28/54 (51%)

Query: 707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLV 760
           G T LH  A   ++ +    +  G +I+   + G T LHIA+  G L +++ L+
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 46.3 bits (110), Expect = 5e-05
 Identities = 69/290 (23%), Positives = 106/290 (36%), Gaps = 68/290 (23%)

Query: 76  EVAKILVDNGATINVQSLNGFTPL------YMAAQENHDGVVRYLLSKGGNQTLATEHNI 129
           ++ K+L+DNGA +N +     TPL                +V+ LL  G +  L T + +
Sbjct: 51  KIVKLLIDNGADVNYKGYIE-TPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGV 109

Query: 130 TPLHVAC-----KWGKVAMVELLISKGANI-EAKTRDGLTPLH-----CAARSGHDNVID 178
           +P  + C           M+  L+SKG N+ + K   G   LH      + +    +VI 
Sbjct: 110 SP--IVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKK---DVIK 164

Query: 179 ILIEKGAALYSKTK-NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHC 237
           IL+  G  L+ KT   GL P++              IY    +D I++            
Sbjct: 165 ILLSFGVNLFEKTSLYGLTPMN--------------IYLRNDIDVISIK----------- 199

Query: 238 GHVRVAKTLLDRKA---DPNAR---ALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRK 291
               V K L+ +       N      L  F   +        K        V   +L   
Sbjct: 200 ----VIKYLIKKGVNIETNNNGSESVLESFLDNN--------KILSKKEFKVLNFILKY- 246

Query: 292 ADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVA 341
              N +   GF PL I+ K + Y+    LLK G  I   ++ G T L  A
Sbjct: 247 IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYA 296

Length = 494

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 40.7 bits (96), Expect = 5e-05
 Identities = 14/30 (46%), Positives = 22/30 (73%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKYGASIAA 329
           +G TPLH+A +    ++V+LLL++GA I A
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 46.6 bits (111), Expect = 6e-05
 Identities = 59/234 (25%), Positives = 90/234 (38%), Gaps = 37/234 (15%)

Query: 459 DQTPL-HVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILT----- 512
            ++ L   A    N ++  LLL            G T LH  + E  D V +IL      
Sbjct: 52  GRSALFVAAIENENLELTELLLNLSCRGAV----GDTLLHAISLEYVDAVEAILLHLLAA 107

Query: 513 --ESG------ASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTES 564
             +SG         T+    G T LHLAA     +I ++LL++ A V ++      +   
Sbjct: 108 FRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQ 167

Query: 565 GASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVA--------- 615
           G     +   G +PL+ AA  G   I  +L +  A + +    G T LH+          
Sbjct: 168 G---VDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAE 224

Query: 616 -SHYDHQ--NVALLLLDRGASP----HAVAKNGYTPLHIAAKKNQMDIATTLLE 662
                 Q  N AL LLD+          +   G TPL +AAK+ ++ +    L 
Sbjct: 225 YEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLA 278

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 40.2 bits (95), Expect = 6e-05
 Identities = 15/33 (45%), Positives = 20/33 (60%)

Query: 607 NGVTPLHVASHYDHQNVALLLLDRGASPHAVAK 639
           +G TPLH+A+   H  V  LLL+ GA  +A  K
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional

 Score = 44.8 bits (106), Expect = 6e-05
 Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 37/174 (21%)

Query: 368 ETPLH--LAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVR 425
           ETP+   L       +I++ L+ NGA V+ + R++                         
Sbjct: 52  ETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDN------------------------- 86

Query: 426 GETPLHLAARANQT---DIVRILLRNGASVDARAREDQTPLHVASRLGNG----DIASLL 478
             + LH     N+    +I++IL+ +G+S+     + +  LH+   + N     ++  LL
Sbjct: 87  NLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHM--YMCNFNVRINVIKLL 144

Query: 479 LQHGASVDAPTKDGYTALHIS-AKEGQDEVASILTESGASITATTKKGFTPLHL 531
           +  G S      D    L+         ++   LT  G  I  T K G+    L
Sbjct: 145 IDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDL 198

Length = 209

>gnl|CDD|165157 PHA02795, PHA02795, ankyrin-like protein; Provisional

 Score = 46.1 bits (109), Expect = 6e-05
 Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 14/111 (12%)

Query: 732 EIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVL---- 787
           +I+ +   G T L+ A + G +++V +L+ENGANVNA  + GYT L  A  +G V+    
Sbjct: 213 DINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRE 272

Query: 788 ----IIDLLLGAGAQPNATTNLFCCATILVKNGAEIDPVTKLSDEHEKSID 834
               I+++LL    +P    ++ C    ++ N  E   V KL  ++   +D
Sbjct: 273 THLKILEILL---REP---LSIDCIKLAILNNTIENHDVIKLCIKYFMMVD 317

Length = 437

>gnl|CDD|165103 PHA02736, PHA02736, Viral ankyrin protein; Provisional

 Score = 43.3 bits (102), Expect = 8e-05
 Identities = 35/165 (21%), Positives = 54/165 (32%), Gaps = 29/165 (17%)

Query: 446 LRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAP-------TKDGYTALHI 498
                       E +  LH   R  NG +  LL    A  D          + G   +HI
Sbjct: 4   PEEIIFASEPDIEGENILHYLCR--NGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHI 61

Query: 499 SAKEGQ---DEVASILTESGASITATTKK-GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQ 554
            +   +    E   +L E GA I    +  G TPLH+A      ++A  L          
Sbjct: 62  VSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCN-------- 113

Query: 555 GKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA 599
                   + G ++        TP ++A +    K+  +L  K A
Sbjct: 114 --------QPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGA 150

Length = 154

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 13/41 (31%), Positives = 23/41 (56%)

Query: 369 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR 409
           T LH AA + + ++V+ LL  G  ++    +  T LH+A+ 
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAE 43

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 17/73 (23%)

Query: 510 ILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASIT 569
           +L      + AT   G TPLHLAAKYG +++ Q LL+                  G  + 
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKP-----------------GVDLN 43

Query: 570 ATTKKGFTPLHLA 582
                G T L LA
Sbjct: 44  LRDSDGLTALDLA 56

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 16/32 (50%), Positives = 23/32 (71%)

Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAK 705
           G TPLHL+A+ GH ++  LL+E GA V+ + K
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|165212 PHA02884, PHA02884, ankyrin repeat protein; Provisional

 Score = 44.6 bits (105), Expect = 1e-04
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 7/132 (5%)

Query: 612 LHVASHYDHQNVALLLLDRGASP---HAVAKNGYT-PLHIAAKKNQMDIATTLLEYNAKP 667
           L+ +  + + ++   +L  GA P     +++N  T PL  A   +  D A  L+ Y A  
Sbjct: 37  LYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADV 96

Query: 668 NAESK-AGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATIT 726
           N  ++ A  TPL++S   G      +L+ +GA ++ Q  + +TP+ L        +A   
Sbjct: 97  NRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLA--F 154

Query: 727 MFNGAEIDPVTK 738
           M    EI    K
Sbjct: 155 MICDNEISNFYK 166

Length = 300

>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional

 Score = 43.7 bits (103), Expect = 1e-04
 Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 11/144 (7%)

Query: 643 TPLH--IAAKKNQMDIATTLLEYNAKPNAESKA-GFTPLH--LSAQEG-HTDMSSLLIEH 696
           TP+   +   K  ++I   L+E  A  N +++    + LH  LS  +    ++  +LI+ 
Sbjct: 53  TPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDS 112

Query: 697 GATVSHQAKNGLTPLH--LCAQEDKVNVATITMFNGAEIDPVTKAGFTPLH--IASHFGQ 752
           G++++ + ++G   LH  +C    ++NV  + + +G             L+  I  H  +
Sbjct: 113 GSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDK 172

Query: 753 LNMVRYLVENGANVNATTNLGYTP 776
             +  +L   G ++N T   GY  
Sbjct: 173 -KIFDFLTSLGIDINETNKSGYNC 195

Length = 209

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 773 GYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           G TPLH A++ G + ++ LLL AGA  NA   
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 14/30 (46%), Positives = 20/30 (66%)

Query: 366 RGETPLHLAARANQTDIVRILLRNGASVDA 395
            G TPLHLAA     ++V++LL  GA ++A
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 14/30 (46%), Positives = 20/30 (66%)

Query: 425 RGETPLHLAARANQTDIVRILLRNGASVDA 454
            G TPLHLAA     ++V++LL  GA ++A
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 14/30 (46%), Positives = 21/30 (70%)

Query: 127 HNITPLHVACKWGKVAMVELLISKGANIEA 156
              TPLH+A + G + +V+LL+ KGA+I A
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 15/29 (51%), Positives = 22/29 (75%)

Query: 367 GETPLHLAARANQTDIVRILLRNGASVDA 395
           G TPLHLAAR    ++V++LL +GA ++A
Sbjct: 2   GNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 15/29 (51%), Positives = 22/29 (75%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDA 454
           G TPLHLAAR    ++V++LL +GA ++A
Sbjct: 2   GNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 15/29 (51%), Positives = 23/29 (79%)

Query: 740 GFTPLHIASHFGQLNMVRYLVENGANVNA 768
           G TPLH+A+  G L +V+ L+E+GA++NA
Sbjct: 2   GNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 8/39 (20%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNAR 297
           +G TPLH+A +    +        V K LL+  AD NAR
Sbjct: 1   DGNTPLHLAARNGHLE--------VVKLLLEAGADVNAR 31

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|165212 PHA02884, PHA02884, ankyrin repeat protein; Provisional

 Score = 43.4 bits (102), Expect = 3e-04
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 6/115 (5%)

Query: 268 CKKN-RYKSSHCNHVWVAKTLLDRKADPNAR---ALNGFT-PLHIACKKNRYKVVELLLK 322
           C  N  Y S   ++  +   +L   ADP A    + N  T PL  A   +     +LL++
Sbjct: 32  CIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIR 91

Query: 323 YGASIAA-TTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAAR 376
           YGA +     E+ +TPL+++   GC+     LL  GA  +  T    TP+ LA  
Sbjct: 92  YGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALM 146

Length = 300

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 14/26 (53%), Positives = 20/26 (76%)

Query: 160 DGLTPLHCAARSGHDNVIDILIEKGA 185
           DG TPLH AA +G+  V+ +L++KGA
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGA 26

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 37.6 bits (88), Expect = 6e-04
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNA 669
           +G TPLH+AA+   +++   LL+  A  NA
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 42.9 bits (101), Expect = 7e-04
 Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 32/158 (20%)

Query: 139 GKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPL 198
           G  A++E L+    + +     G TPLH AA  G+++ + +L++    ++ +  NG   L
Sbjct: 536 GNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTAL 595

Query: 199 ----------------HMASQGDHEA---------------ATRVLIYHGAGVDEITVDY 227
                           H AS  D  A               A + L+  G  VD      
Sbjct: 596 WNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQG 655

Query: 228 LTALHVASHCGHVRVAKTLLDRKADPNARAL-NGFTPL 264
            TAL VA    HV + + L+   AD +     + F+P 
Sbjct: 656 ATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPT 693

Length = 823

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 42.7 bits (100), Expect = 7e-04
 Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 33/279 (11%)

Query: 287 LLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGC 346
           LL R   PN    +G  PLHIA K N  ++V +LL +GA   A  +   TPL+  S  G 
Sbjct: 58  LLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLS--GT 115

Query: 347 MNIAI----FLLQAGAAPDTAT-VRGETPLHLAARANQTDIVRILLRNG--ASVDARARE 399
            +  I     L+Q GA  + +    G  PL LA       + + ++  G  A +  +  +
Sbjct: 116 DDEVIERINLLVQYGAKINNSVDEEGCGPL-LACTDPSERVFKKIMSIGFEARIVDKFGK 174

Query: 400 DQTPLHVASRLRRFSSASQSALTRVR-------GETPLHL--AARANQTDIVRILLRNGA 450
           +    H+ S   + S+ S      +        G TPLH+  +      DI+ +LL +  
Sbjct: 175 NHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLPS-T 233

Query: 451 SVDARAREDQTPLHVASR-LGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVAS 509
            V+ + +   +PL +  + L    + + LL     +   T      ++I     +D+V  
Sbjct: 234 DVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQT------VNICIFYDRDDVLE 287

Query: 510 ILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD 548
           I+ + G    +T  K      +A + G ++  + LL  D
Sbjct: 288 IINDKGKQYDSTDFK------MAVEVGSIRCVKYLLDND 320

Length = 446

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 38.1 bits (89), Expect = 7e-04
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 81  LVDNG-ATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVA 135
           L+++G   +N    NG TPL++AA+     +V++LL  G +  L     +T L +A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 37.2 bits (87), Expect = 8e-04
 Identities = 13/30 (43%), Positives = 20/30 (66%)

Query: 127 HNITPLHVACKWGKVAMVELLISKGANIEA 156
              TPLH+A + G + +V+LL+  GA+I A
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 42.2 bits (99), Expect = 0.001
 Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 18/139 (12%)

Query: 229 TALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKS----SHCNHVWVA 284
           T LH+A+  G+      LL    + + R  NG T L  A     +K      H   +   
Sbjct: 560 TPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASI--- 616

Query: 285 KTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFM 344
                  +DP+A        L  A K+N    ++ LLK G ++ +    G T L VA   
Sbjct: 617 -------SDPHA----AGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAE 665

Query: 345 GCMNIAIFLLQAGAAPDTA 363
             +++   L+  GA  D A
Sbjct: 666 DHVDMVRLLIMNGADVDKA 684

Length = 823

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 15/43 (34%), Positives = 26/43 (60%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLL 115
           G+ E+ K L++ G  IN    +G T L++AA+  +  V++ LL
Sbjct: 12  GRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 37.1 bits (87), Expect = 0.001
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGN 120
           +G TPL++AA+  H  VV+ LL  G +
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGAD 27

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 37.1 bits (87), Expect = 0.001
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 491 DGYTALHISAKEGQDEVASILTESGASITATTK 523
           DG T LH++A+ G  EV  +L E+GA + A  K
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|165103 PHA02736, PHA02736, Viral ankyrin protein; Provisional

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 79  KILVDNGATINVQ-SLNGFTPLYMAAQENHDGVVRYLLSKGG-NQTLATEHNITPLHVAC 136
           K+L++ GA IN +  + G TPL++A    +  +  +L ++ G N  +      TP +VAC
Sbjct: 75  KLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVAC 134

Query: 137 KWGKVAMVELLISKGA 152
           +     M+ +L +KGA
Sbjct: 135 ERHDAKMMNILRAKGA 150

Length = 154

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 36.5 bits (85), Expect = 0.001
 Identities = 14/29 (48%), Positives = 21/29 (72%)

Query: 160 DGLTPLHCAARSGHDNVIDILIEKGAALY 188
           DG TPLH AAR+G+  ++ +L+E GA + 
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGADIN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|165089 PHA02716, PHA02716, CPXV016; CPX019; EVM010; Provisional

 Score = 42.6 bits (100), Expect = 0.001
 Identities = 81/382 (21%), Positives = 121/382 (31%), Gaps = 111/382 (29%)

Query: 380 TDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRV------------RGE 427
            DI+  L  NG +V+ +     TPLH  + L    +   S + ++             G 
Sbjct: 192 IDILEWLCNNGVNVNLQNNHLITPLH--TYLIT-GNVCASVIKKIIELGGDMDMKCVNGM 248

Query: 428 TP----------------------------------LHL---AARANQTDIVRILLRNGA 450
           +P                                  LH     AR     +V   L+ G 
Sbjct: 249 SPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGV 308

Query: 451 SVDARAREDQTPLH--VASRLGNGDIASLLLQHGASVDAPTKDGYTALH-----ISAKEG 503
            +  +    +T LH  +     + DI  LL ++G  ++ P   G T LH     +S    
Sbjct: 309 KLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNI 368

Query: 504 QD---------EVASILTESGASITATTKKGFTPLH----LAAKYGRMKIAQMLLQKDAP 550
            D         +V   L   GA ITA    G+TPL      A  Y    I   L+     
Sbjct: 369 LDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVL 428

Query: 551 VDSQGKVASILTESGASITATTKKGFTPL---HLAAKYGRMKIAQMLLQKDAPVDSQGKN 607
              + ++   L           +   TP    H+ AKY         +  D   D     
Sbjct: 429 NMVKHRILQDL---------LIRVDDTPCIIHHIIAKYN--------IPTDLYTDEYEPY 471

Query: 608 GVTPLHVASHY---DHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQ-----MDIATT 659
             T +H   H    +  N A+              +G TPLH++   +      MD    
Sbjct: 472 DSTKIHDVYHCAIIERYNNAVC-----------ETSGMTPLHVSIISHTNANIVMDSFVY 520

Query: 660 LLEYNAKPNAESKAGFTPLHLS 681
           LL      N  +K G TPL L+
Sbjct: 521 LLSIQYNINIPTKNGVTPLMLT 542

Length = 764

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 41.7 bits (98), Expect = 0.002
 Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 26/172 (15%)

Query: 622 NVALLLLDRGASPHAVAKNGY--TPL-------HIAAKKNQMDIATTLLEYNAKPNAESK 672
            +  LL+D GA    V   GY  TPL        I + K +  I   LL++ A  N ++ 
Sbjct: 51  KIVKLLIDNGAD---VNYKGYIETPLCAVLRNREITSNKIK-KIVKLLLKFGADINLKTF 106

Query: 673 AGFTPLHLSAQEGH---TDMSSLLIEHGATVSHQAKN--GLTPLHLCAQEDKVNVATITM 727
            G +P+       +    DM   L+  G  V+   KN  G   LH+  +   V    I +
Sbjct: 107 NGVSPIVCFIYNSNINNCDMLRFLLSKGINVN-DVKNSRGYNLLHMYLESFSVKKDVIKI 165

Query: 728 FNGAEIDPVTKA---GFTPLHI----ASHFGQLNMVRYLVENGANVNATTNL 772
                ++   K    G TP++I          + +++YL++ G N+    N 
Sbjct: 166 LLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNG 217

Length = 494

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 41.3 bits (97), Expect = 0.002
 Identities = 62/286 (21%), Positives = 120/286 (41%), Gaps = 36/286 (12%)

Query: 529 LHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTE--SGASITATTKKGFTPLHLAAKYG 586
           L+L  K  ++KI ++L+   A V+ +G + + L        IT+   K            
Sbjct: 41  LYLKRKDVKIKIVKLLIDNGADVNYKGYIETPLCAVLRNREITSNKIK------------ 88

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHV---ASHYDHQNVALLLLDRGASPHAVAKN--G 641
             KI ++LL+  A ++ +  NGV+P+      S+ ++ ++   LL +G + + V KN  G
Sbjct: 89  --KIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDV-KNSRG 145

Query: 642 YTPLHIAAKK--NQMDIATTLLEYNAKPNAESKA--GFTPLHL----SAQEGHTDMSSLL 693
           Y  LH+  +    + D+   LL +      E  +  G TP+++            +   L
Sbjct: 146 YNLLHMYLESFSVKKDVIKILLSFGVNL-FEKTSLYGLTPMNIYLRNDIDVISIKVIKYL 204

Query: 694 IEHGATVSHQAKNGLTPLHLCAQEDKV---NVATITMF--NGAEIDPVTKAGFTPLHIAS 748
           I+ G  +        + L      +K+       +  F     +I+   K GF PL I++
Sbjct: 205 IKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISA 264

Query: 749 HFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG 794
                    YL++ G ++   +  G T L  A + G + +++ +L 
Sbjct: 265 KVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQ 310

Length = 494

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 759 LVENG-ANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           L+E+G  ++NAT   G TPLH A++ G + ++  LL  G   N   +
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDS 47

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 334 GLTPLHVASFMGCMNIAIFLLQAGAAPD 361
           G TPLH+A+  G + +   LL+AGA  +
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|165212 PHA02884, PHA02884, ankyrin repeat protein; Provisional

 Score = 41.1 bits (96), Expect = 0.002
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 8/115 (6%)

Query: 242 VAKTLLDRKADPNARALNGFTPLHIACKKNRY-KSSHCNHVWVAKTLLDRKADPNARALN 300
           +   +L   ADP A       PL    K N    +  C++   AK L+   AD N  A  
Sbjct: 48  IIDAILKLGADPEAP-----FPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEE 102

Query: 301 G-FTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLL 354
              TPL+I+      K +E+LL YGA I   T   +TP+ +A  M C N   F++
Sbjct: 103 AKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELAL-MICNNFLAFMI 156

Length = 300

>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional

 Score = 40.2 bits (94), Expect = 0.002
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 16/107 (14%)

Query: 262 TPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARAL-NGFTPLH--IACKKN-RYKVV 317
           TP+  +C +    +     V + K L++  AD N +   N  + LH  ++  KN   +++
Sbjct: 53  TPIF-SCLEKDKVN-----VEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEIL 106

Query: 318 ELLLKYGASIAATTESGLTPLHVASFMGCMNIAI----FLLQAGAAP 360
           ++L+  G+SI    E G   LH+  +M   N+ I     L+ +G + 
Sbjct: 107 KILIDSGSSITEEDEDGKNLLHM--YMCNFNVRINVIKLLIDSGVSF 151

Length = 209

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 13/29 (44%), Positives = 21/29 (72%)

Query: 524 KGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
            G TPLHLAA+ G +++ ++LL K A ++
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADIN 29

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 13/29 (44%), Positives = 21/29 (72%)

Query: 574 KGFTPLHLAAKYGRMKIAQMLLQKDAPVD 602
            G TPLHLAA+ G +++ ++LL K A ++
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADIN 29

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGNQTL 123
           +G TPL++AA+  +  VV+ LL KG +   
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|165089 PHA02716, PHA02716, CPXV016; CPX019; EVM010; Provisional

 Score = 41.4 bits (97), Expect = 0.002
 Identities = 47/230 (20%), Positives = 90/230 (39%), Gaps = 26/230 (11%)

Query: 573 KKGFTPLH--LAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALL--LL 628
           K G+  LH  L   Y  + I + L      V+ Q  + +TPLH      +   +++  ++
Sbjct: 175 KTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKII 234

Query: 629 DRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTP--LHLS---AQ 683
           + G        NG +P+ +    N  +I   +     +    +K    P  LH     A+
Sbjct: 235 ELGGDMDMKCVNGMSPI-MTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLAR 293

Query: 684 EGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN--GAEIDPVTKAGF 741
                +    ++ G  + ++   G T LH       ++   I + +  G +++     G 
Sbjct: 294 NIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGN 353

Query: 742 TPLHI--------------ASHFGQLNMVRYLVENGANVNATTNLGYTPL 777
           T LH                 +  +L++++ L+  GA++ A   LGYTPL
Sbjct: 354 TVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPL 403

Length = 764

>gnl|CDD|165108 PHA02741, PHA02741, hypothetical protein; Provisional

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 62  VSLSNTKFEATGQEEVAKILVDNGATINVQ-SLNGFTPLYMAAQENHDGVVRYLLSKGG- 119
           + ++  K EA    E+   L++ GA IN Q  L G T L++AA      +  +L  + G 
Sbjct: 64  IHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGI 123

Query: 120 NQTLATEHNITPLHVACKWGKVAMVELL 147
           +       N +P  +A     VAM+++L
Sbjct: 124 DLHFCNADNKSPFELAIDNEDVAMMQIL 151

Length = 169

>gnl|CDD|165231 PHA02917, PHA02917, ankyrin-like protein; Provisional

 Score = 41.1 bits (96), Expect = 0.002
 Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 29/159 (18%)

Query: 660 LLEYNAKPNAESKAG-FTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPL-HLC-AQ 716
           +LEY A  N E+  G F  +++ +      M  LL + G    +   +G  P+ HLC + 
Sbjct: 352 MLEYGAVVNKEAIHGYFRNINIDSYT----MKYLLKKEGGDAVNHLDDGEIPIGHLCKSN 407

Query: 717 EDKVNVATITMFNG---------------------AEIDPVTKAGFTPLHIASHFGQLNM 755
               N  T T   G                      +I+ + K G T LH A  + + ++
Sbjct: 408 YGCYNFYTYTYKKGLCDMSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSL 467

Query: 756 VRYLVENGANVNATTNLGYTPLHQASQQGR-VLIIDLLL 793
           V  L+E+G++VN  +N GYT +  A  + R + ++ +LL
Sbjct: 468 VSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLL 506

Length = 661

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 40.4 bits (94), Expect = 0.003
 Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 8/105 (7%)

Query: 22  KLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKIL 81
           K   LH+A    D K   LL++   +   +E     T L ++++       G   + K+L
Sbjct: 135 KFSPLHLAVMMGDIKGIELLIDHK-ACLDIEDCCGCTPLIIAMAK------GDIAICKML 187

Query: 82  VDNGATINVQSLNG-FTPLYMAAQENHDGVVRYLLSKGGNQTLAT 125
           +D+GA I+    NG    L  A + N   +VR  + +G +  +  
Sbjct: 188 LDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMF 232

Length = 413

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 35.7 bits (83), Expect = 0.004
 Identities = 15/50 (30%), Positives = 26/50 (52%)

Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
           G T LH +A  G  ++   L+E G  ++   ++G T LH+ A+   + V 
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVL 50

Length = 54

>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional

 Score = 39.4 bits (92), Expect = 0.004
 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 3/94 (3%)

Query: 74  QEEVAKILVDNGATINVQSLNGFTPL--YMAAQENHDGVVRYLLSKGGNQTLATEHNITP 131
           + E+ KIL+D+G++I  +  +G   L  YM        V++ L+  G +       N   
Sbjct: 102 EPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNI 161

Query: 132 LHVACKW-GKVAMVELLISKGANIEAKTRDGLTP 164
           L+    +     + + L S G +I    + G   
Sbjct: 162 LYSYILFHSDKKIFDFLTSLGIDINETNKSGYNC 195

Length = 209

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 34.9 bits (81), Expect = 0.004
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 226 DYLTALHVASHCGHVRVAKTLLDRKADPNA 255
           D  T LH+A+  G++ V K LLD+ AD NA
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 34.9 bits (81), Expect = 0.004
 Identities = 12/29 (41%), Positives = 21/29 (72%)

Query: 524 KGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
            G TPLHLAA+ G +++ ++LL+  A ++
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGADIN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 34.9 bits (81), Expect = 0.004
 Identities = 12/29 (41%), Positives = 21/29 (72%)

Query: 574 KGFTPLHLAAKYGRMKIAQMLLQKDAPVD 602
            G TPLHLAA+ G +++ ++LL+  A ++
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGADIN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	838
KOG4177|consensus	1143		100.0
KOG4177|consensus	1143		100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
KOG0510|consensus	929		100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
KOG0510|consensus	929		100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
KOG0508|consensus	615		100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
KOG0508|consensus	615		100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
KOG4412|consensus	226		100.0
KOG4412|consensus	226		100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
KOG4369|consensus	2131		100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
KOG4369|consensus	2131		100.0
KOG0509|consensus	600		100.0
KOG0509|consensus	600		99.98
PHA02795	437	ankyrin-like protein; Provisional	99.97
PHA02795	437	ankyrin-like protein; Provisional	99.96
PHA02859	209	ankyrin repeat protein; Provisional	99.96
PHA02859	209	ankyrin repeat protein; Provisional	99.96
KOG0502|consensus	296		99.95
KOG0502|consensus	296		99.95
KOG0507|consensus	854		99.94
KOG0507|consensus	854		99.92
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.92
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.91
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.91
KOG0514|consensus	452		99.89
PHA02743	166	Viral ankyrin protein; Provisional	99.89
KOG0505|consensus	527		99.89
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.89
PHA02743	166	Viral ankyrin protein; Provisional	99.87
KOG0514|consensus	452		99.86
KOG0505|consensus	527		99.86
PHA02741	169	hypothetical protein; Provisional	99.85
PHA02884	300	ankyrin repeat protein; Provisional	99.84
PHA02736	154	Viral ankyrin protein; Provisional	99.83
PHA02741	169	hypothetical protein; Provisional	99.82
KOG0512|consensus	228		99.82
PHA02884	300	ankyrin repeat protein; Provisional	99.81
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.78
PHA02736	154	Viral ankyrin protein; Provisional	99.78
KOG0512|consensus	228		99.78
KOG0195|consensus	448		99.73
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.73
KOG0195|consensus	448		99.71
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.69
KOG3676|consensus	782		99.69
KOG4214|consensus	117		99.68
KOG3676|consensus	782		99.66
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.66
KOG4214|consensus	117		99.59
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.46
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.46
KOG1710|consensus	396		99.46
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.41
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.39
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.39
KOG0515|consensus	752		99.38
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.38
KOG1710|consensus	396		99.36
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.33
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.32
KOG0515|consensus	752		99.3
PF13606	30	Ank_3: Ankyrin repeat	98.88
KOG0783|consensus	1267		98.86
KOG0506|consensus	622		98.85
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.82
PF13606	30	Ank_3: Ankyrin repeat	98.76
KOG0782|consensus	1004		98.72
KOG0783|consensus	1267		98.69
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.69
KOG0782|consensus	1004		98.68
KOG0818|consensus	669		98.6
KOG0506|consensus	622		98.59
KOG0818|consensus	669		98.41
KOG3609|consensus	822		98.34
KOG0705|consensus	749		98.31
KOG2384|consensus	223		98.31
KOG2384|consensus	223		98.29
KOG0511|consensus	516		98.28
KOG0522|consensus	560		98.27
KOG3609|consensus	822		98.21
KOG0705|consensus	749		98.17
KOG0511|consensus	516		98.17
KOG0521|consensus	785		98.0
KOG0522|consensus	560		97.89
KOG0521|consensus	785		97.84
KOG0520|consensus	975		97.81
KOG0520|consensus	975		97.78
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	97.2
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	97.13
KOG2505|consensus	591		96.87
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.79
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.46
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	96.4
KOG2505|consensus	591		96.39
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	95.88
PLN03081	697	pentatricopeptide (PPR) repeat-containing protein;	94.13
PLN03218	1060	maturation of RBCL 1; Provisional	93.46
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	92.83
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	92.56
PLN03081	697	pentatricopeptide (PPR) repeat-containing protein;	92.21
PLN03218	1060	maturation of RBCL 1; Provisional	89.37
PLN03077	857	Protein ECB2; Provisional	88.06
PLN03077	857	Protein ECB2; Provisional	84.38

>KOG4177|consensus

Probab=100.00  E-value=7.1e-69  Score=581.79  Aligned_cols=643  Identities=47%  Similarity=0.735  Sum_probs=435.9

Q ss_pred             chHHHHHHHhhcCCCCCCCCcHHhHHHhcCCHHHHHHHHhccccccchhhcccCcchhhhccchhhhhcCcHHHHHHHHH
Q psy3308           4 GHDRVVAVLLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVD   83 (838)
Q Consensus         4 g~~~iv~~l~~~~~~~~~~~~al~~Aa~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~l~~   83 (838)
                      ||-++|--+..+..++  ...+|+.||++|..+.+..|++..                                      
T Consensus         5 g~~~~~a~~~~~~~~~--~~~~l~~a~r~~~~~~~~~l~~~e--------------------------------------   44 (1143)
T KOG4177|consen    5 GHDRAVAVLLENDVKG--RLPALHIAARNDDTNAAKLLLQNE--------------------------------------   44 (1143)
T ss_pred             ccccccccccccCccc--cchHHHHHHhccchhhcccccccc--------------------------------------
Confidence            7777888888888888  456799999999999999888710                                      


Q ss_pred             CCCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCc
Q psy3308          84 NGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLT  163 (838)
Q Consensus        84 ~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~t  163 (838)
                        .........+.||+|+|+-.|+.+++++|+.+++..+.....|.+|||.|++.|+.++|+.|+..|+.++..+..+.|
T Consensus        45 --~~~~~~sk~~~~pl~~aa~~~~~~v~~~ll~~~a~v~~~~~~~~~plh~a~~~~~a~~v~~ll~~ga~~~~~~~~~lT  122 (1143)
T KOG4177|consen   45 --HNADVDSKSGFTPLHIAAHYGNENVAELLLNRGAIVNATARNGITPLHVASKRGDAEMVKLLLCRGAQIDARDRDGLT  122 (1143)
T ss_pred             --cccchhcccccCHHHHHhhhhhhhhhhhhhccccccCcccccCccHHHHHHhhcchhHHHHHHhccCchhhcccCCCc
Confidence              001111226789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHH
Q psy3308         164 PLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVA  243 (838)
Q Consensus       164 al~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv  243 (838)
                      |||.|+..|+.+++.+|+..+++.+.+++.|.+|+++|+.   ...++++.++..      .+.. +++.|+.+++.+++
T Consensus       123 pLh~aa~~g~~~~~~~ll~~~a~~~~k~~~g~t~l~~a~~---~~~~~ll~~~~~------~d~l-~~~~~~~~~~~~~~  192 (1143)
T KOG4177|consen  123 PLHCAARKGHVQVIELLLQHGAPINIKTKNGLSPLHMAAQ---VACARLLLEYKA------PDYL-RLHVAAHCGHARVA  192 (1143)
T ss_pred             chhhhcccccHHHHHHHHHccCCCcccccCCCCchhhhcc---hhhhHHhhhccc------chhh-hhhHHhhcchHHHH
Confidence            9999999999999999999999999999999999999998   777788877644      2333 66888888888888


Q ss_pred             HHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy3308         244 KTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKY  323 (838)
Q Consensus       244 ~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~  323 (838)
                      ++|+...++++..+..+.||++.||..+        .++++++++.+|+++...+..|.+|||.|+..|+++++++|+++
T Consensus       193 ~ll~~~~~~~~a~~~~~~tpl~~a~~~n--------ri~~~eLll~~gadv~a~d~~gl~~lh~a~~~g~~~i~~~l~~~  264 (1143)
T KOG4177|consen  193 KLLLDKKADPNASALNGFTPLHIACKKN--------RIKVVELLLKHGADVSAKDESGLTPLHVAAFMGHLDIVKLLLQH  264 (1143)
T ss_pred             hhhhcccCCccccccCCCCchhhhcccc--------ccceeeeeeeccCcCCcccccCccHHHHHHhccchhHHHHHHhc
Confidence            8888877777766555555555555544        23345555555555555555555555555555555555555555


Q ss_pred             CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCccccccCCCCH
Q psy3308         324 GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTP  403 (838)
Q Consensus       324 ~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~  403 (838)
                      |+.++..+..+.||+|.|+..+..++.++|++.|+++........++++.|...|.                        
T Consensus       265 ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~------------------------  320 (1143)
T KOG4177|consen  265 GASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGADVLAKARDDQTPLHIASRLGH------------------------  320 (1143)
T ss_pred             ccccCcccccccCcchhhhccchhhhHhhhhccCcccccccccccChhhhhcccch------------------------
Confidence            55554444445555555555555555555555544444444444444444444444                        


Q ss_pred             HHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy3308         404 LHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGA  483 (838)
Q Consensus       404 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~  483 (838)
                                                         .++++++++.+..++..+..+.+|+|.++..++.++..++...+.
T Consensus       321 -----------------------------------~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~  365 (1143)
T KOG4177|consen  321 -----------------------------------EEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGA  365 (1143)
T ss_pred             -----------------------------------HHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhcccc
Confidence                                               444444444444445455555555555555555555555555544


Q ss_pred             CCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhh
Q psy3308         484 SVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTE  563 (838)
Q Consensus       484 ~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~  563 (838)
                      .-...+..+.+|++.|+..|..+++++++..|++++...+.|.|||+.|+.+++.++++.+++++..             
T Consensus       366 ~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~-------------  432 (1143)
T KOG4177|consen  366 QRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGAS-------------  432 (1143)
T ss_pred             ccCcccccCCcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEeccCCC-------------
Confidence            4444455555555555555555555555555555555555555555555555555555555544332             


Q ss_pred             cCCCccccCCCCCcHHHHHHHcC-cHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCC
Q psy3308         564 SGASITATTKKGFTPLHLAAKYG-RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGY  642 (838)
Q Consensus       564 ~~~~~~~~~~~~~~~l~~a~~~~-~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~  642 (838)
                          .+..+..|.|++|.|+..| ..+....+++.|.++|.....|.||||+|+..|+.++++.|++.++..+.....+-
T Consensus       433 ----~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l  508 (1143)
T KOG4177|consen  433 ----PNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGL  508 (1143)
T ss_pred             ----hhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhcc
Confidence                2333444556666666666 55666666667777777777777777777777777777777777666666666677


Q ss_pred             hHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHH
Q psy3308         643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNV  722 (838)
Q Consensus       643 t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i  722 (838)
                      +++|.|...+...+++.++++|++++.++..|.||||.|+.+|+.++|++|+++|++++.+++.|+||||.|+..|+.+|
T Consensus       509 ~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i  588 (1143)
T KOG4177|consen  509 TPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDI  588 (1143)
T ss_pred             chhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHH
Confidence            77777777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-----CccCCCCCCcHHHHHHH
Q psy3308         723 ATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN-----VNATTNLGYTPLHQASQ  782 (838)
Q Consensus       723 ~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~l~~A~~  782 (838)
                      +.+|+++|+.+|..|.+|.|||++|+..|+++++++|+..+++     +......|.+|...+-.
T Consensus       589 ~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e~  653 (1143)
T KOG4177|consen  589 AELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAEE  653 (1143)
T ss_pred             HHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHHHH
Confidence            7777777777777777777777777777777777777777666     55555566777666553

>KOG4177|consensus

Probab=100.00  E-value=5.9e-67  Score=566.86  Aligned_cols=625  Identities=44%  Similarity=0.721  Sum_probs=536.2

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCCHH
Q psy3308          96 FTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDN  175 (838)
Q Consensus        96 ~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~  175 (838)
                      ...||.|+++|..+.++.|++.....+.....+.||+|.|+..|+.+++++|+..++.++.....|.||||.|++.|+.+
T Consensus        22 ~~~l~~a~r~~~~~~~~~l~~~e~~~~~~sk~~~~pl~~aa~~~~~~v~~~ll~~~a~v~~~~~~~~~plh~a~~~~~a~  101 (1143)
T KOG4177|consen   22 LPALHIAARNDDTNAAKLLLQNEHNADVDSKSGFTPLHIAAHYGNENVAELLLNRGAIVNATARNGITPLHVASKRGDAE  101 (1143)
T ss_pred             chHHHHHHhccchhhcccccccccccchhcccccCHHHHHhhhhhhhhhhhhhccccccCcccccCccHHHHHHhhcchh
Confidence            45699999999999999999887776667778899999999999999999999999998888999999999999999999


Q ss_pred             HHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHHHCCCCccc
Q psy3308         176 VIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNA  255 (838)
Q Consensus       176 iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~~~~~~~~~  255 (838)
                      +++.|+..|+..+..+..+.||||.|+..|+.+++.+|++++++.+..+..+.+|+++|+.   ...++++.++..    
T Consensus       102 ~v~~ll~~ga~~~~~~~~~lTpLh~aa~~g~~~~~~~ll~~~a~~~~k~~~g~t~l~~a~~---~~~~~ll~~~~~----  174 (1143)
T KOG4177|consen  102 MVKLLLCRGAQIDARDRDGLTPLHCAARKGHVQVIELLLQHGAPINIKTKNGLSPLHMAAQ---VACARLLLEYKA----  174 (1143)
T ss_pred             HHHHHHhccCchhhcccCCCcchhhhcccccHHHHHHHHHccCCCcccccCCCCchhhhcc---hhhhHHhhhccc----
Confidence            9999999999888888888889998888888888888888888888888888888888887   666677766543    


Q ss_pred             cccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCC
Q psy3308         256 RALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGL  335 (838)
Q Consensus       256 ~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~  335 (838)
                      .  .-. +++.+...+        +.++.+++.....+++..+.++.||+|.|+..+.+++++.++.+|+++...+..+.
T Consensus       175 ~--d~l-~~~~~~~~~--------~~~~~~ll~~~~~~~~a~~~~~~tpl~~a~~~nri~~~eLll~~gadv~a~d~~gl  243 (1143)
T KOG4177|consen  175 P--DYL-RLHVAAHCG--------HARVAKLLLDKKADPNASALNGFTPLHIACKKNRIKVVELLLKHGADVSAKDESGL  243 (1143)
T ss_pred             c--hhh-hhhHHhhcc--------hHHHHhhhhcccCCccccccCCCCchhhhccccccceeeeeeeccCcCCcccccCc
Confidence            1  111 334444332        55566666666666666666666777777776777777766666666666666666


Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCccccccCCCCHHHHHHhhCcccc
Q psy3308         336 TPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSS  415 (838)
Q Consensus       336 ~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~~~~~~~~~~  415 (838)
                      +||+.|+..|+++++.+++.+|+.++..+..+.||++.|+..+..|+.++|++                           
T Consensus       244 ~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~---------------------------  296 (1143)
T KOG4177|consen  244 TPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQ---------------------------  296 (1143)
T ss_pred             cHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchhhhHhhhhc---------------------------
Confidence            66666666666666666666666666666555555555555555555555554                           


Q ss_pred             hhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChH
Q psy3308         416 ASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTA  495 (838)
Q Consensus       416 ~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~  495 (838)
                                                      +|+++........+|++.+...|..++++++++.++.++..+..+.++
T Consensus       297 --------------------------------~ga~~~~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~  344 (1143)
T KOG4177|consen  297 --------------------------------NGADVLAKARDDQTPLHIASRLGHEEIVHLLLQAGATPNAARTAGYTP  344 (1143)
T ss_pred             --------------------------------cCcccccccccccChhhhhcccchHHHHHHHhhccCCccccCcCCccc
Confidence                                            445555566677899999999999999999999999999999999999


Q ss_pred             HHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCC
Q psy3308         496 LHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKG  575 (838)
Q Consensus       496 l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  575 (838)
                      +|.++..++.++..++.+.+..-...++.+.+|++.|+.+|+.+.++.++..+..                 .+...+.|
T Consensus       345 lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~-----------------~~~~gk~g  407 (1143)
T KOG4177|consen  345 LHLAAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGAD-----------------PNSAGKNG  407 (1143)
T ss_pred             ccHhhhhhhHHHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhhccCC-----------------cccCCCCC
Confidence            9999999999999999999888888889999999999999999999999987765                 45667789


Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcH
Q psy3308         576 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYD-HQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQM  654 (838)
Q Consensus       576 ~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~-~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~  654 (838)
                      .||||.|+..++.++|+.++++|++.+..+..|.||+|.|+..+ ..++...+++.|.+++.....|.||||.|++.|+.
T Consensus       408 vTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~  487 (1143)
T KOG4177|consen  408 VTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHT  487 (1143)
T ss_pred             cceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCc
Confidence            99999999999999999999999999999999999999999999 88999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCC
Q psy3308         655 DIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID  734 (838)
Q Consensus       655 ~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~  734 (838)
                      ++++.|++.++..+.....+-+++|.|...+...+++.++++|++++.++..+.||||.|+..|++++|++|+++|++++
T Consensus       488 ~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~  567 (1143)
T KOG4177|consen  488 EVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVN  567 (1143)
T ss_pred             hHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCcccc
Confidence            99999999998888888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCC-----CCCCCCccch-
Q psy3308         735 PVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQ-----PNATTNLFCC-  808 (838)
Q Consensus       735 ~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~~~~-  808 (838)
                      .++..|+||||.|+..|+.+|+.+|+++|+++|..|.+|.|||+.|++.|+++++++|+..|++     +...+..|.+ 
T Consensus       568 ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p  647 (1143)
T KOG4177|consen  568 AKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVP  647 (1143)
T ss_pred             ccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccCh
Confidence            9999999999999999999999999999999999999999999999999999999999999999     7777788888 


Q ss_pred             HHHHHH
Q psy3308         809 ATILVK  814 (838)
Q Consensus       809 ~~~~~~  814 (838)
                      .+....
T Consensus       648 ~~v~e~  653 (1143)
T KOG4177|consen  648 EDVAEE  653 (1143)
T ss_pred             hhHHHH
Confidence            665544

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.5e-53  Score=478.17  Aligned_cols=469  Identities=23%  Similarity=0.279  Sum_probs=395.6

Q ss_pred             HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q psy3308         287 LLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGAS-IAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATV  365 (838)
Q Consensus       287 Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~-~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~  365 (838)
                      |..+|++.+..+..+.||||.|+..|+.|+|++|++.++. +...+..|.||||.|+..++..  ..++......+....
T Consensus        27 ~~~~~~~~~~~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~~--~~~~~l~~~~~~~~~  104 (682)
T PHA02876         27 LHKHGANQCENESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVM--DIVISLTLDCDIILD  104 (682)
T ss_pred             HhhhhhhhcccccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCcc--ccccccccchhhccc
Confidence            5566777777778899999999999999999999999877 4556778999999999988743  333322222222222


Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHC--CCCccccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHH
Q psy3308         366 RGETPLHLAARANQTDIVRILLRN--GASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVR  443 (838)
Q Consensus       366 ~~~~~l~~A~~~g~~~iv~~Ll~~--g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~  443 (838)
                      .+.+.+..+.......+++.|.+.  +.++......                      ......++++.++..++.++++
T Consensus       105 ~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~----------------------~~~~~~~~l~~~i~~~~~~i~k  162 (682)
T PHA02876        105 IKYASIILNKHKLDEACIHILKEAISGNDIHYDKIN----------------------ESIEYMKLIKERIQQDELLIAE  162 (682)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHhhc----------------------cchhhhHHHHHHHHCCcHHHHH
Confidence            233333333333333333333322  2222111100                      1112345788899999999999


Q ss_pred             HHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCC
Q psy3308         444 ILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTK  523 (838)
Q Consensus       444 ~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~  523 (838)
                      +|++.|++++.++..|.||||.|+..|+.+++++|+++|++++..+..|.+||+.|+..++.+++++|++.+.+++.   
T Consensus       163 ~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~---  239 (682)
T PHA02876        163 MLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINK---  239 (682)
T ss_pred             HHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998877653   


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcH-HHHHHHHhCCCCCC
Q psy3308         524 KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRM-KIAQMLLQKDAPVD  602 (838)
Q Consensus       524 ~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~-~~v~~Ll~~~~~~~  602 (838)
                       +.+++..|+..++.+++++|++.+.                 +++..+..|.||||.|+..++. +++++|++.|++++
T Consensus       240 -~~~~L~~ai~~~~~~~~~~Ll~~g~-----------------~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin  301 (682)
T PHA02876        240 -NDLSLLKAIRNEDLETSLLLYDAGF-----------------SVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVN  301 (682)
T ss_pred             -CcHHHHHHHHcCCHHHHHHHHHCCC-----------------CCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCC
Confidence             3578999999999999999998765                 3456677899999999999986 69999999999999


Q ss_pred             CCCCCCCcHHHHHHHcC-CHHHHHHHHhCCCCCCccCCCCChHHHHHHHc-CcHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy3308         603 SQGKNGVTPLHVASHYD-HQNVALLLLDRGASPHAVAKNGYTPLHIAAKK-NQMDIATTLLEYNAKPNAESKAGFTPLHL  680 (838)
Q Consensus       603 ~~~~~~~~~l~~A~~~~-~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~-~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~  680 (838)
                      .++..|.||||+|+..| ..+++++|+..|++++..+..|.||||.|+.. ++.++++.|++.|++++.++..|.||||+
T Consensus       302 ~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~  381 (682)
T PHA02876        302 AKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHY  381 (682)
T ss_pred             CcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHH
Confidence            99999999999999999 59999999999999999999999999999985 57899999999999999999999999999


Q ss_pred             HHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCC-HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC-CHHHHHH
Q psy3308         681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDK-VNVATITMFNGAEIDPVTKAGFTPLHIASHFG-QLNMVRY  758 (838)
Q Consensus       681 A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~-~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g-~~~~v~~  758 (838)
                      |+..|+.+++++|+++|++++..+..|.||||+|+..++ ..++++|+++|+++|.+|..|+||||+|+..| +.+++++
T Consensus       382 Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~l  461 (682)
T PHA02876        382 AAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEM  461 (682)
T ss_pred             HHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHH
Confidence            999999999999999999999999999999999998766 46899999999999999999999999999876 7899999


Q ss_pred             HHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCC
Q psy3308         759 LVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT  802 (838)
Q Consensus       759 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~  802 (838)
                      |+++|+++|..|..|.|||++|+..+  ++++.|+.+|+++...
T Consensus       462 Ll~~Gad~n~~d~~g~tpl~~a~~~~--~~v~~Ll~~~a~~~~~  503 (682)
T PHA02876        462 LLDNGADVNAINIQNQYPLLIALEYH--GIVNILLHYGAELRDS  503 (682)
T ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHhC--CHHHHHHHCCCCCCcC
Confidence            99999999999999999999999876  5899999999988754

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.8e-52  Score=471.33  Aligned_cols=462  Identities=23%  Similarity=0.265  Sum_probs=382.0

Q ss_pred             HHHHHHcCCH-HHHHHH-----HhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHc
Q psy3308         305 LHIACKKNRY-KVVELL-----LKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA-PDTATVRGETPLHLAARA  377 (838)
Q Consensus       305 l~~A~~~g~~-~~v~~L-----~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~-~~~~~~~~~~~l~~A~~~  377 (838)
                      |+.++..|.. +++..+     +++|++....+..+.||||.|+..||.++|++|++..+. ....+..|.||||+|+..
T Consensus         6 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~   85 (682)
T PHA02876          6 LYRIMCRGNCIDILSAIDNYDLHKHGANQCENESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICII   85 (682)
T ss_pred             HHHHHhcCchHHHHHHHHHHHHhhhhhhhcccccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCC
Confidence            5666777766 333333     344655555566788999999999999999999987665 345666788999998887


Q ss_pred             CcHHHHHHHHHCCCCccccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcC---CHHHHHHHHHCCCCCCC
Q psy3308         378 NQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARAN---QTDIVRILLRNGASVDA  454 (838)
Q Consensus       378 g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~---~~~iv~~Ll~~~~~~~~  454 (838)
                      ++.  +..+.......+.....+.                          +.+..+....   ..++++-.+. +.++..
T Consensus        86 ~~~--~~~~~~l~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~il~~~~~-~~~~~~  136 (682)
T PHA02876         86 PNV--MDIVISLTLDCDIILDIKY--------------------------ASIILNKHKLDEACIHILKEAIS-GNDIHY  136 (682)
T ss_pred             CCc--cccccccccchhhcccccH--------------------------HHHHHHHHHHHHHHHHHHHHHhc-CCcccH
Confidence            763  3333322211111111111                          1111111111   1223332221 112111


Q ss_pred             ----CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHH
Q psy3308         455 ----RAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLH  530 (838)
Q Consensus       455 ----~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~  530 (838)
                          ......++++.++..++.+++++|++.|++++..+..|.||||.|+..|+.+++++|++.|++++..+..|.+||+
T Consensus       137 ~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~  216 (682)
T PHA02876        137 DKINESIEYMKLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLE  216 (682)
T ss_pred             HhhccchhhhHHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHH
Confidence                1123456788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCc
Q psy3308         531 LAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVT  610 (838)
Q Consensus       531 ~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~  610 (838)
                      .|+..|+.+++++|++.+....                     .+.++++.|+..++.+++++|++.|++++..+..|.|
T Consensus       217 ~A~~~~~~~ivk~Ll~~~~~~~---------------------~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~T  275 (682)
T PHA02876        217 CAVDSKNIDTIKAIIDNRSNIN---------------------KNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNT  275 (682)
T ss_pred             HHHHcCCHHHHHHHHhcCCCCC---------------------CCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence            9999999999999998765432                     2347899999999999999999999999999999999


Q ss_pred             HHHHHHHcCCH-HHHHHHHhCCCCCCccCCCCChHHHHHHHcC-cHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc-CcH
Q psy3308         611 PLHVASHYDHQ-NVALLLLDRGASPHAVAKNGYTPLHIAAKKN-QMDIATTLLEYNAKPNAESKAGFTPLHLSAQE-GHT  687 (838)
Q Consensus       611 ~l~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~-~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~-g~~  687 (838)
                      |||+|+..++. +++++|++.|++++..+..|.||||.|+..| +.++++.|+..|++++..+..|.||||+|+.. ++.
T Consensus       276 pLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~  355 (682)
T PHA02876        276 PLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNK  355 (682)
T ss_pred             HHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcH
Confidence            99999999986 6999999999999999999999999999999 59999999999999999999999999999985 578


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHHCCCCC
Q psy3308         688 DMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQ-LNMVRYLVENGANV  766 (838)
Q Consensus       688 ~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~-~~~v~~Ll~~g~~~  766 (838)
                      +++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++ ..++++|+++|+++
T Consensus       356 ~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadi  435 (682)
T PHA02876        356 DIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANV  435 (682)
T ss_pred             HHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999997665 57899999999999


Q ss_pred             ccCCCCCCcHHHHHHHhC-cHHHHHHHHhCCCCCCCCCCccch-HHHHHHcC
Q psy3308         767 NATTNLGYTPLHQASQQG-RVLIIDLLLGAGAQPNATTNLFCC-ATILVKNG  816 (838)
Q Consensus       767 ~~~~~~g~t~l~~A~~~~-~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~~~  816 (838)
                      |.+|..|+||||+|++.+ +.+++++|+++|++++.+|..|.| +.+|+..+
T Consensus       436 n~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a~~~~  487 (682)
T PHA02876        436 NSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIALEYH  487 (682)
T ss_pred             CcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhC
Confidence            999999999999999976 789999999999999999999999 99988754

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.1e-49  Score=432.40  Aligned_cols=450  Identities=19%  Similarity=0.219  Sum_probs=336.2

Q ss_pred             hHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHH----HHHH
Q psy3308         280 HVWVAKTLLDRKADPNARALNGFTPLHIACKK---NRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMN----IAIF  352 (838)
Q Consensus       280 ~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~---g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~----iv~~  352 (838)
                      .++.++.|+..|...+.++.+|.||||.|+..   |+.++|++|++.|++++..+..|.|||+.|+..|+.+    +++.
T Consensus        11 ~~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~   90 (661)
T PHA02917         11 ALDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMA   90 (661)
T ss_pred             HHHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHH
Confidence            57789999999999998899999999998665   8899999999999999999999999999999999854    5678


Q ss_pred             HHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCccccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHH
Q psy3308         353 LLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHL  432 (838)
Q Consensus       353 Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  432 (838)
                      |++.+...+..+  ...++++|+..|+.+++++|+++|++++..+..|+|||+.+                        .
T Consensus        91 Ll~~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~------------------------~  144 (661)
T PHA02917         91 LLEATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENY------------------------V  144 (661)
T ss_pred             HHhccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHH------------------------H
Confidence            887643333333  23567889999999999999999999999887765554322                        2


Q ss_pred             HHHcCCHHHHHHHHHCCCCCCCCCC---CC-----------CcHHHHHHH-----------cCCHHHHHHHHhCCCCCCC
Q psy3308         433 AARANQTDIVRILLRNGASVDARAR---ED-----------QTPLHVASR-----------LGNGDIASLLLQHGASVDA  487 (838)
Q Consensus       433 A~~~~~~~iv~~Ll~~~~~~~~~~~---~~-----------~~~l~~a~~-----------~~~~~~v~~L~~~~~~~~~  487 (838)
                      |+..|+.+++++|+++|++++..+.   .|           .|||++|+.           .++.+++++|+++|++++.
T Consensus       145 a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~  224 (661)
T PHA02917        145 MTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS  224 (661)
T ss_pred             HccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc
Confidence            3467899999999999999976543   23           599999975           4688999999999999999


Q ss_pred             CCCCCChHHHHHHHhCcH--HHHHHHHHCCCCCc----ccCCCCCcHHHHHHHc---------CCHHHHHHHHhCCCCCC
Q psy3308         488 PTKDGYTALHISAKEGQD--EVASILTESGASIT----ATTKKGFTPLHLAAKY---------GRMKIAQMLLQKDAPVD  552 (838)
Q Consensus       488 ~~~~~~~~l~~A~~~~~~--e~v~~L~~~~~~~~----~~~~~~~~~l~~A~~~---------g~~~~~~~Ll~~~~~~~  552 (838)
                      .+..|.||||+|+..|+.  +++++|++ |++++    ..+..+.+++++|+.-         .+.++++.|++.|..  
T Consensus       225 ~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~--  301 (661)
T PHA02917        225 IDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP--  301 (661)
T ss_pred             CCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCC--
Confidence            999999999999999985  79999975 77654    3445566777777731         166778888777642  


Q ss_pred             CchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCC--HHHHHHHHh
Q psy3308         553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ-KDAPVDSQGKNGVTPLHVASHYDH--QNVALLLLD  629 (838)
Q Consensus       553 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~-~~~~~~~~~~~~~~~l~~A~~~~~--~~~v~~Ll~  629 (838)
                                           .+.++++.++..++.+++++++. .+.++-      .+++..++..|.  .+++++|++
T Consensus       302 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~g~~~~~~v~~Ll~  354 (661)
T PHA02917        302 ---------------------HGIMCSIVPLWRNDKETISLILKTMNSDVL------QHILIEYMTFGDIDIPLVECMLE  354 (661)
T ss_pred             ---------------------CceeEeeecccccchHHHHHHHHHhchHHH------HHHHHHHHHcCCCcHHHHHHHHH
Confidence                                 23456677777777777777774 233320      112233334554  457788888


Q ss_pred             CCCCCCccCCCCChHHHHHHHcCcHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCc--HHHHHHHHhCCCCCCCCCCC
Q psy3308         630 RGASPHAVAKNGYTPLHIAAKKNQMDIATTLLE-YNAKPNAESKAGFTPLHLSAQEGH--TDMSSLLIEHGATVSHQAKN  706 (838)
Q Consensus       630 ~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~-~~~~~~~~~~~g~t~L~~A~~~g~--~~iv~~Ll~~g~~~~~~~~~  706 (838)
                      +|++++..+..|.++.    ...+.+++++|+. .|++++..+..|+||||.|++.+.  .+...+...+|         
T Consensus       355 ~GAdvn~~~~~g~~~~----~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~---------  421 (661)
T PHA02917        355 YGAVVNKEAIHGYFRN----INIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKG---------  421 (661)
T ss_pred             cCCCCCCCCccccchh----hcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhc---------
Confidence            8888877777776643    3556677777776 576666666667888877765543  23222221211         


Q ss_pred             CCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHH-hCc
Q psy3308         707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQ-QGR  785 (838)
Q Consensus       707 ~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~-~~~  785 (838)
                       ...  .+...+..+++++|+++|+++|.+|..|+||||+|+..++.+++++|+++|+++|..|..|+|||++|+. .++
T Consensus       422 -~~~--~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~  498 (661)
T PHA02917        422 -LCD--MSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRN  498 (661)
T ss_pred             -cch--hhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCC
Confidence             111  1112235778888888888888888888888888888888888888888888888888888888888885 678


Q ss_pred             HHHHHHHHhCCCCCCC
Q psy3308         786 VLIIDLLLGAGAQPNA  801 (838)
Q Consensus       786 ~~~v~~Ll~~ga~~~~  801 (838)
                      .+++++|+++|++++.
T Consensus       499 ~~iv~~LL~~ga~i~~  514 (661)
T PHA02917        499 IELLKMLLCHKPTLDC  514 (661)
T ss_pred             HHHHHHHHHcCCChhH
Confidence            8888888888888863

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=9.1e-49  Score=425.11  Aligned_cols=427  Identities=18%  Similarity=0.170  Sum_probs=355.8

Q ss_pred             HHHHHHHHHCCCCcccCCCCCCcHHHHHHHc---CcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHH----HHHHH
Q psy3308          75 EEVAKILVDNGATINVQSLNGFTPLYMAAQE---NHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVA----MVELL  147 (838)
Q Consensus        75 ~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~~---g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~----iv~~L  147 (838)
                      ++.||.|+.+|..++.+|.+|+||||+|+..   |+.++|++|+++|++++..+..|.||||+|+..|+.+    +|+.|
T Consensus        12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~L   91 (661)
T PHA02917         12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMAL   91 (661)
T ss_pred             HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHH
Confidence            6778999999999999999999999998665   8899999999999999999999999999999999954    56788


Q ss_pred             HHcCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHH--HhCCcHHHHHHHHhCCCCCCcccC
Q psy3308         148 ISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMA--SQGDHEAATRVLIYHGAGVDEITV  225 (838)
Q Consensus       148 ~~~~~~~~~~~~~~~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A--~~~g~~~~v~~L~~~~~~~~~~~~  225 (838)
                      ++.+...+..+  ..+++++|+.+|+.|+|++|+++|++++.++..|.|||+.|  +.+|+.+++++|+++|++++..+.
T Consensus        92 l~~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~  169 (661)
T PHA02917         92 LEATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDE  169 (661)
T ss_pred             HhccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccc
Confidence            88754333333  34678889999999999999999999999999999999954  468999999999999999874432


Q ss_pred             ---CC-----------ccHHHHHHh-----------cCCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccCh
Q psy3308         226 ---DY-----------LTALHVASH-----------CGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNH  280 (838)
Q Consensus       226 ---~~-----------~~~l~~A~~-----------~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~  280 (838)
                         .|           .|||++|+.           +|+.++|++|++.|+++|..+..|.||||+|+.+|..      .
T Consensus       170 ~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~------~  243 (661)
T PHA02917        170 DDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHI------D  243 (661)
T ss_pred             ccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCC------c
Confidence               22           599999986           5799999999999999999999999999999999843      2


Q ss_pred             HHHHHHHHhCCCCCC----CCCCCCCcHHHHHHHc---------CCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCH
Q psy3308         281 VWVAKTLLDRKADPN----ARALNGFTPLHIACKK---------NRYKVVELLLKYGASIAATTESGLTPLHVASFMGCM  347 (838)
Q Consensus       281 ~~i~~~Ll~~~~~~~----~~~~~~~~~l~~A~~~---------g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~  347 (838)
                      .+++++|++ |++.+    ..+..|.++++.|++-         .+.++|++|++.|++      .+.+++++++..++.
T Consensus       244 ~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~------~~~~~~~~~~~~~~~  316 (661)
T PHA02917        244 IDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP------HGIMCSIVPLWRNDK  316 (661)
T ss_pred             HHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCC------CceeEeeecccccch
Confidence            689999975 77664    3566778888888842         278999999999975      356788899999999


Q ss_pred             HHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCc--HHHHHHHHHCCCCccccccCCCCHHHHHHhhCcccchhhhhhccc
Q psy3308         348 NIAIFLLQA-GAAPDTATVRGETPLHLAARANQ--TDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRV  424 (838)
Q Consensus       348 ~iv~~Ll~~-~~~~~~~~~~~~~~l~~A~~~g~--~~iv~~Ll~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  424 (838)
                      +++++++.. +.+.-      .+++..++..|.  .+++++|++.|++++..+..|.+                      
T Consensus       317 ~~~~~~~~~~~~~~~------~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~----------------------  368 (661)
T PHA02917        317 ETISLILKTMNSDVL------QHILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYF----------------------  368 (661)
T ss_pred             HHHHHHHHHhchHHH------HHHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCccccc----------------------
Confidence            999999852 32210      122333444665  66999999999999987665543                      


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcC-----------------------CHHHHHHHHh
Q psy3308         425 RGETPLHLAARANQTDIVRILLR-NGASVDARAREDQTPLHVASRLG-----------------------NGDIASLLLQ  480 (838)
Q Consensus       425 ~~~~~l~~A~~~~~~~iv~~Ll~-~~~~~~~~~~~~~~~l~~a~~~~-----------------------~~~~v~~L~~  480 (838)
                              +....+.+++++|+. .|++++..+..|.|||+.|++++                       ..++++.|++
T Consensus       369 --------~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~  440 (661)
T PHA02917        369 --------RNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLP  440 (661)
T ss_pred             --------hhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHH
Confidence                    223567788888887 58777777778999999887543                       3568899999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHH-cCCHHHHHHHHhCCCCCC
Q psy3308         481 HGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAK-YGRMKIAQMLLQKDAPVD  552 (838)
Q Consensus       481 ~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~-~g~~~~~~~Ll~~~~~~~  552 (838)
                      +|++++..+..|.||||+|+..++.+++++|++.|++++..+..|.|||++|+. .++.+++++|+.++++.+
T Consensus       441 ~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~ga~i~  513 (661)
T PHA02917        441 YLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKPTLD  513 (661)
T ss_pred             CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcCCChh
Confidence            999999999999999999999999999999999999999999999999999996 689999999999987665

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=2.6e-46  Score=392.04  Aligned_cols=370  Identities=21%  Similarity=0.213  Sum_probs=320.4

Q ss_pred             chHHHHHHHhhcCCCCCCCCcHHhHHHhcCCHHHHHHHHhccccccchhhcccCcchhhhccchhhhhcCcHHHHHHHHH
Q psy3308           4 GHDRVVAVLLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVD   83 (838)
Q Consensus         4 g~~~iv~~l~~~~~~~~~~~~al~~Aa~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~l~~   83 (838)
                      ++++-|+|+++           +..+..+|+.+.++.++...      ......+.++    ...+...++.++|++|++
T Consensus         2 ~~i~~~~~~~s-----------l~~~~~~~n~~~~~~~l~~~------~~~g~~~~Lh----~~~~~~~~~~~iv~~Ll~   60 (446)
T PHA02946          2 DNIMSAEYYLS-----------LYAKYNSKNLDVFRNMLQAI------EPSGNYHILH----AYCGIKGLDERFVEELLH   60 (446)
T ss_pred             chHHHHHHHHH-----------HHHHHccCcHHHHHHHHhcc------CCCCCChHHH----HHHHhcCCCHHHHHHHHH
Confidence            57788899987           46788899999999999711      1111111221    111235568899999999


Q ss_pred             CCCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcC--CHHHHHHHHHcCCCCcc-ccCC
Q psy3308          84 NGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWG--KVAMVELLISKGANIEA-KTRD  160 (838)
Q Consensus        84 ~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g--~~~iv~~L~~~~~~~~~-~~~~  160 (838)
                      +|+++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..+  .++++++|+++|++++. .+..
T Consensus        61 ~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~  140 (446)
T PHA02946         61 RGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEE  140 (446)
T ss_pred             CcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCC
Confidence            99999999999999999999999999999999999999999999999999999876  48999999999999984 6889


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhC--CcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcC
Q psy3308         161 GLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQG--DHEAATRVLIYHGAGVDEITVDYLTALHVASHCG  238 (838)
Q Consensus       161 ~~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~--g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g  238 (838)
                      |.|||+ ||..|+.+++++|++.|++++..+..|.|||++|+..  ++.+++++|+++|++++..+..|.||||+|+..|
T Consensus       141 g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~  219 (446)
T PHA02946        141 GCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKT  219 (446)
T ss_pred             CCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence            999997 7778999999999999999999999999999998775  4579999999999999999999999999999986


Q ss_pred             --CHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy3308         239 --HVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKV  316 (838)
Q Consensus       239 --~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~  316 (838)
                        +.+++++|++ |++++.++..|.|||++|+..+.       ..+++++|+++|...+     +. .++.|+..+..++
T Consensus       220 ~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~-------~~~~~~~Ll~~g~~~~-----~~-~~~~a~~~~~~~~  285 (446)
T PHA02946        220 VKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLS-------PAHLINKLLSTSNVIT-----DQ-TVNICIFYDRDDV  285 (446)
T ss_pred             CCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCC-------hHHHHHHHHhCCCCCC-----Cc-HHHHHHHcCchHH
Confidence              8999999995 89999999999999999999862       3579999999987544     23 4889999999999


Q ss_pred             HHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCcccc
Q psy3308         317 VELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDAR  396 (838)
Q Consensus       317 v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~  396 (838)
                      ++++.++|.      ..|.||||+|+.+|+.++|++|++++.       .+.|||++|+..++.+++++|+.+|++++..
T Consensus       286 ~e~l~~~g~------~~~~TpLh~Aa~~g~~eivk~Ll~~~~-------~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~  352 (446)
T PHA02946        286 LEIINDKGK------QYDSTDFKMAVEVGSIRCVKYLLDNDI-------ICEDAMYYAVLSEYETMVDYLLFNHFSVDSV  352 (446)
T ss_pred             HHHHHHcCc------ccCCCHHHHHHHcCCHHHHHHHHHCCC-------ccccHHHHHHHhCHHHHHHHHHHCCCCCCCc
Confidence            999998764      347799999999999999999999864       4579999999999999999999999999874


Q ss_pred             ccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCC
Q psy3308         397 AREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNG  449 (838)
Q Consensus       397 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~  449 (838)
                       .                          .|.|++++|++.++.++++.|+.+.
T Consensus       353 -~--------------------------~G~t~l~~a~~~~~~~~~~~ll~~~  378 (446)
T PHA02946        353 -V--------------------------NGHTCMSECVRLNNPVILSKLMLHN  378 (446)
T ss_pred             -c--------------------------ccccHHHHHHHcCCHHHHHHHHhcC
Confidence             2                          3678889999999999999999864

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.4e-46  Score=393.71  Aligned_cols=416  Identities=16%  Similarity=0.178  Sum_probs=280.0

Q ss_pred             HHHHHHHhCCCCcc-ccCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHH
Q psy3308         315 KVVELLLKYGASIA-ATTESGLTPLHVASFMG---CMNIAIFLLQAGAAPDTATVRGETPLHLAARAN--QTDIVRILLR  388 (838)
Q Consensus       315 ~~v~~L~~~~~~~~-~~~~~~~~~l~~A~~~g---~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g--~~~iv~~Ll~  388 (838)
                      ..+++.++..++++ .++..|.||||+|+.+|   +.++|++|+++|++++..+..|.|||++|+..+  +.|++++|++
T Consensus        21 ~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~  100 (672)
T PHA02730         21 KKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLIS  100 (672)
T ss_pred             HHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHh
Confidence            44555566555555 55566777777777665   367777777777777777777777777776655  5777777777


Q ss_pred             CCCCc--cccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHH--cCCHHHHHHHHH-CCCCCCCCCC-----C
Q psy3308         389 NGASV--DARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAAR--ANQTDIVRILLR-NGASVDARAR-----E  458 (838)
Q Consensus       389 ~g~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~--~~~~~iv~~Ll~-~~~~~~~~~~-----~  458 (838)
                      .|++.  +..+..+.                          ++++.++.  +++.+++++|++ .+.+++....     .
T Consensus       101 ~~~~~~~~~~~~~~d--------------------------~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~  154 (672)
T PHA02730        101 SYSNASNELTSNIND--------------------------FDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCL  154 (672)
T ss_pred             cCCCCCcccccccCC--------------------------chHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhcccc
Confidence            65433  33333222                          23333333  666666666664 4455544322     4


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCC-CcHHHHH-----
Q psy3308         459 DQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKG-FTPLHLA-----  532 (838)
Q Consensus       459 ~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~-~~~l~~A-----  532 (838)
                      +.+|++.+...++.++|++|+++|++++...-.+                          ...+... .+.|++.     
T Consensus       155 ~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~--------------------------~~~~~~~c~~~l~~~il~~~  208 (672)
T PHA02730        155 GLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRS--------------------------CMYDSDRCKNSLHYYILSHR  208 (672)
T ss_pred             chhhhhHhcCCCchHHHHHHHHcCCccccccccc--------------------------ccccCCccchhHHHHHHhhh
Confidence            5666666666666666666666666653111000                          0011112 2333322     


Q ss_pred             -HHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHH--HHHcCcHHHHHHHHhCCCCCCCCCCC--
Q psy3308         533 -AKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHL--AAKYGRMKIAQMLLQKDAPVDSQGKN--  607 (838)
Q Consensus       533 -~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~--a~~~~~~~~v~~Ll~~~~~~~~~~~~--  607 (838)
                       ...++.+++++|+++                 |++++.++..|.||||.  +...++.++|++|++...+....+..  
T Consensus       209 ~~~~n~~eiv~lLIs~-----------------GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~  271 (672)
T PHA02730        209 ESESLSKDVIKCLIDN-----------------NVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQ  271 (672)
T ss_pred             hhhccCHHHHHHHHHC-----------------CCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccc
Confidence             244566777777655                 55677888999999985  44556799999999832221111110  


Q ss_pred             --CCcHHHHHH----Hc----CCHHHHHHHHhCCCCC-------CccCCCCCh---------------------HHHHHH
Q psy3308         608 --GVTPLHVAS----HY----DHQNVALLLLDRGASP-------HAVAKNGYT---------------------PLHIAA  649 (838)
Q Consensus       608 --~~~~l~~A~----~~----~~~~~v~~Ll~~g~~~-------~~~~~~~~t---------------------~L~~A~  649 (838)
                        -+..|.--.    +.    =+.++|+.|++.+...       ...+..|.+                     .|+.-.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~  351 (672)
T PHA02730        272 PYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYL  351 (672)
T ss_pred             hhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHH
Confidence              001111000    00    1246788888765431       112334432                     566666


Q ss_pred             HcC---cHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCc----HHHHHHHHhCCC--CCCCCCCCCCcHhHH---HHhc
Q psy3308         650 KKN---QMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGH----TDMSSLLIEHGA--TVSHQAKNGLTPLHL---CAQE  717 (838)
Q Consensus       650 ~~~---~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~----~~iv~~Ll~~g~--~~~~~~~~~~t~l~~---A~~~  717 (838)
                      +.+   +.+++++|+++|++++.. ..|.||||+|+..++    .+++++|+++|+  +++..+..|.||||.   |...
T Consensus       352 ~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~  430 (672)
T PHA02730        352 HYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFN  430 (672)
T ss_pred             hcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhc
Confidence            655   589999999999999986 789999999998875    899999999998  689999999999984   3333


Q ss_pred             C---------CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCC-CCCcHHHHHHHh--Cc
Q psy3308         718 D---------KVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTN-LGYTPLHQASQQ--GR  785 (838)
Q Consensus       718 g---------~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~--~~  785 (838)
                      +         ..+++++|+++|+++|.+|..|+||||+|+..++.+++++|+++|+++|..|. .|.|||++|+..  ++
T Consensus       431 n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~  510 (672)
T PHA02730        431 NCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENK  510 (672)
T ss_pred             cccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCc
Confidence            2         23579999999999999999999999999999999999999999999999997 599999999974  79


Q ss_pred             HHHHHHHHhCCCCCC
Q psy3308         786 VLIIDLLLGAGAQPN  800 (838)
Q Consensus       786 ~~~v~~Ll~~ga~~~  800 (838)
                      .+++++|+++|++.+
T Consensus       511 ~eIv~~LLs~ga~i~  525 (672)
T PHA02730        511 TKLVDLLLSYHPTLE  525 (672)
T ss_pred             HHHHHHHHHcCCCHH
Confidence            999999999999764

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=7.2e-46  Score=388.68  Aligned_cols=333  Identities=20%  Similarity=0.243  Sum_probs=169.1

Q ss_pred             CcHHHHHHH--cCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCC
Q psy3308          96 FTPLYMAAQ--ENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGH  173 (838)
Q Consensus        96 ~t~l~~A~~--~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~  173 (838)
                      .++||.++.  .++.++|++|+++|++++.++..|.||||+||+.|+.++|++|+++|++++.+|..|+||||+|+..++
T Consensus        38 ~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~  117 (446)
T PHA02946         38 YHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDD  117 (446)
T ss_pred             ChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCC
Confidence            344554432  223455555555555555555555555555555555555555555555555555555555555544432


Q ss_pred             --HHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHHHCCC
Q psy3308         174 --DNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKA  251 (838)
Q Consensus       174 --~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~~~~~  251 (838)
                        .+++++|+++|++++.                                ..+..+.|||+ |+..|+.+++++|++.|+
T Consensus       118 ~~~e~v~lLl~~Gadin~--------------------------------~~d~~g~tpL~-aa~~~~~~vv~~Ll~~ga  164 (446)
T PHA02946        118 EVIERINLLVQYGAKINN--------------------------------SVDEEGCGPLL-ACTDPSERVFKKIMSIGF  164 (446)
T ss_pred             chHHHHHHHHHcCCCccc--------------------------------ccCCCCCcHHH-HHHCCChHHHHHHHhccc
Confidence              4455555555554442                                12334444443 334444555555555555


Q ss_pred             CccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCccc
Q psy3308         252 DPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN--RYKVVELLLKYGASIAA  329 (838)
Q Consensus       252 ~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g--~~~~v~~L~~~~~~~~~  329 (838)
                      +++..+..|.||||.|+..+.      .+.+++++|++.|++++.++..|.||||+|+..|  +.+++++|++ |++++.
T Consensus       165 d~~~~d~~G~t~Lh~A~~~~~------~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~  237 (446)
T PHA02946        165 EARIVDKFGKNHIHRHLMSDN------PKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNK  237 (446)
T ss_pred             cccccCCCCCCHHHHHHHhcC------CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCC
Confidence            555555555555554444321      1344555555555555555555555555555543  4555555553 555555


Q ss_pred             cCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCccccccCCCCHHHHHH
Q psy3308         330 TTESGLTPLHVASFMGC-MNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVAS  408 (838)
Q Consensus       330 ~~~~~~~~l~~A~~~g~-~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~~~  408 (838)
                      .+..|.||||+|+..++ .+++++|+++|...+.     . .++.|+..+..++++++.++|.+                
T Consensus       238 ~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~-----~-~~~~a~~~~~~~~~e~l~~~g~~----------------  295 (446)
T PHA02946        238 QNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITD-----Q-TVNICIFYDRDDVLEIINDKGKQ----------------  295 (446)
T ss_pred             CCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCC-----c-HHHHHHHcCchHHHHHHHHcCcc----------------
Confidence            55555555555555554 3455555555433221     1 24555555555555555554321                


Q ss_pred             hhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q psy3308         409 RLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAP  488 (838)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~  488 (838)
                                      .+.||||+|+..|+.+++++|+++|.       .+.|||++|+..++.+++++|+.+|++++..
T Consensus       296 ----------------~~~TpLh~Aa~~g~~eivk~Ll~~~~-------~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~  352 (446)
T PHA02946        296 ----------------YDSTDFKMAVEVGSIRCVKYLLDNDI-------ICEDAMYYAVLSEYETMVDYLLFNHFSVDSV  352 (446)
T ss_pred             ----------------cCCCHHHHHHHcCCHHHHHHHHHCCC-------ccccHHHHHHHhCHHHHHHHHHHCCCCCCCc
Confidence                            12355555555555555555555432       2345555555555555555555555555553


Q ss_pred             CCCCChHHHHHHHhCcHHHHHHHHHC
Q psy3308         489 TKDGYTALHISAKEGQDEVASILTES  514 (838)
Q Consensus       489 ~~~~~~~l~~A~~~~~~e~v~~L~~~  514 (838)
                       ..|.||+++|+..++.++++.|+..
T Consensus       353 -~~G~t~l~~a~~~~~~~~~~~ll~~  377 (446)
T PHA02946        353 -VNGHTCMSECVRLNNPVILSKLMLH  377 (446)
T ss_pred             -cccccHHHHHHHcCCHHHHHHHHhc
Confidence             3455556555555555555555553

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=5.5e-45  Score=381.83  Aligned_cols=425  Identities=20%  Similarity=0.178  Sum_probs=329.3

Q ss_pred             HHHHHHHHHCCCCcc-cCCCCCCcHHHHHHHcC---cHHHHHHHHHCCCCCCccccCCCcHHHHHHHcC--CHHHHHHHH
Q psy3308          75 EEVAKILVDNGATIN-VQSLNGFTPLYMAAQEN---HDGVVRYLLSKGGNQTLATEHNITPLHVACKWG--KVAMVELLI  148 (838)
Q Consensus        75 ~~~v~~l~~~~~~~~-~~~~~~~t~l~~A~~~g---~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g--~~~iv~~L~  148 (838)
                      ...+|+.++..+++| .+|..|+||||+|+..|   +.++|++|+++|++++.+|..|.||||+|+..|  +.|||++|+
T Consensus        20 ~~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll   99 (672)
T PHA02730         20 YKKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLI   99 (672)
T ss_pred             HHHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHH
Confidence            456788888877888 78889999999999997   599999999999999999999999999999977  799999999


Q ss_pred             HcCCC--CccccCCCCcHHHHHHH--cCCHHHHHHHHH-cCCCccCCC-----CCCccHHHHHHhCCcHHHHHHHHhCCC
Q psy3308         149 SKGAN--IEAKTRDGLTPLHCAAR--SGHDNVIDILIE-KGAALYSKT-----KNGLAPLHMASQGDHEAATRVLIYHGA  218 (838)
Q Consensus       149 ~~~~~--~~~~~~~~~tal~~A~~--~g~~~iv~~L~~-~~~~~~~~~-----~~~~~~l~~A~~~g~~~~v~~L~~~~~  218 (838)
                      +.|++  ++..+..+.+||+.++.  +++.++|++|++ .+.+++...     ..|.+|+.+|+..++.++|++|+++|+
T Consensus       100 ~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~  179 (672)
T PHA02730        100 SSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSEC  179 (672)
T ss_pred             hcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCC
Confidence            99654  46677778999999888  999999999996 566655442     278999999999999999999999999


Q ss_pred             CCCc-------ccCCC-ccHHHHH------HhcCCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHH
Q psy3308         219 GVDE-------ITVDY-LTALHVA------SHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVA  284 (838)
Q Consensus       219 ~~~~-------~~~~~-~~~l~~A------~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~  284 (838)
                      +++.       .+... .+.|+++      ..+++.|++++|+++|+++|.++..|.||||++..+.      .++.|++
T Consensus       180 ~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~------~~~~eiv  253 (672)
T PHA02730        180 YSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCS------TIDIEIV  253 (672)
T ss_pred             cccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC------cccHHHH
Confidence            8851       22223 3444422      5678999999999999999999999999999633321      1368999


Q ss_pred             HHHHhCCCCCCCCC-CCC---CcHHHHHH----H----cCCHHHHHHHHhCCCCc-------cccCCCCCc---------
Q psy3308         285 KTLLDRKADPNARA-LNG---FTPLHIAC----K----KNRYKVVELLLKYGASI-------AATTESGLT---------  336 (838)
Q Consensus       285 ~~Ll~~~~~~~~~~-~~~---~~~l~~A~----~----~g~~~~v~~L~~~~~~~-------~~~~~~~~~---------  336 (838)
                      ++|++...+...-+ ..+   +..|+--.    +    .=+.++|+.|++.+...       ...+..|.+         
T Consensus       254 ~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~  333 (672)
T PHA02730        254 KLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILK  333 (672)
T ss_pred             HHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHH
Confidence            99998444332211 111   11121111    1    11457888888854331       112333332         


Q ss_pred             ------------HHHHHHHcC---CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCc----HHHHHHHHHCCC--Cccc
Q psy3308         337 ------------PLHVASFMG---CMNIAIFLLQAGAAPDTATVRGETPLHLAARANQ----TDIVRILLRNGA--SVDA  395 (838)
Q Consensus       337 ------------~l~~A~~~g---~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~----~~iv~~Ll~~g~--~~~~  395 (838)
                                  .|+.-.+.+   +.+++++|+++|++++.. ..|.||||+|+..++    .+++++|+++|+  +++.
T Consensus       334 ~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~  412 (672)
T PHA02730        334 RFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINH  412 (672)
T ss_pred             hhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccc
Confidence                        455555655   699999999999999985 789999999988875    899999999997  6888


Q ss_pred             cccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q psy3308         396 RAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIA  475 (838)
Q Consensus       396 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v  475 (838)
                      .+..|+|||+..........          +.    .+......+++++|+++|++++.++..|.|||++|+..++.+++
T Consensus       413 kd~~G~T~Lh~~i~a~~~n~----------~~----~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eiv  478 (672)
T PHA02730        413 VSNNGRLCMYGLILSRFNNC----------GY----HCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFA  478 (672)
T ss_pred             cccCCCchHhHHHHHHhccc----------cc----cccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHH
Confidence            89999999984211100000          00    00011245789999999999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCC-CCChHHHHHHHh--CcHHHHHHHHHCCCCCcc
Q psy3308         476 SLLLQHGASVDAPTK-DGYTALHISAKE--GQDEVASILTESGASITA  520 (838)
Q Consensus       476 ~~L~~~~~~~~~~~~-~~~~~l~~A~~~--~~~e~v~~L~~~~~~~~~  520 (838)
                      ++|+++|++++..+. .|.||++.|+..  ++.+++++|+++|+++..
T Consensus       479 e~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~~  526 (672)
T PHA02730        479 RRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLET  526 (672)
T ss_pred             HHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHHH
Confidence            999999999999997 599999999874  789999999999988763

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=3.4e-45  Score=391.88  Aligned_cols=349  Identities=19%  Similarity=0.204  Sum_probs=293.8

Q ss_pred             HcCCHHHHHHHHHCC-CCCCCC-CCCCCcHHHHHHH--cCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCc--HHHH
Q psy3308         435 RANQTDIVRILLRNG-ASVDAR-AREDQTPLHVASR--LGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQ--DEVA  508 (838)
Q Consensus       435 ~~~~~~iv~~Ll~~~-~~~~~~-~~~~~~~l~~a~~--~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~--~e~v  508 (838)
                      +.++.+++++|++.| ++++.. +..|.||||.|+.  .++.+++++|+++|++++..+..|.||||.|+..|+  .+++
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIV  230 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVI  230 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHH
Confidence            468999999999999 999988 8899999998864  467899999999999999999999999999999995  5999


Q ss_pred             HHHHHCCCCCcccCCCCCcHHHHHH---HcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcH---HHHH
Q psy3308         509 SILTESGASITATTKKGFTPLHLAA---KYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTP---LHLA  582 (838)
Q Consensus       509 ~~L~~~~~~~~~~~~~~~~~l~~A~---~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---l~~a  582 (838)
                      ++|++.|++++.++..|.|||+.|+   ..++.++++.|++.......                   .....+   +..|
T Consensus       231 klLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~-------------------~~~~~~L~~~i~A  291 (764)
T PHA02716        231 KKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKV-------------------KNIPMILHSYITL  291 (764)
T ss_pred             HHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhcccccc-------------------ccchhhhHHHHHH
Confidence            9999999999999999999999875   56789999999875321100                   011122   3457


Q ss_pred             HHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHhCCCCCCccCCCCChHHHHHHH----------
Q psy3308         583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASH--YDHQNVALLLLDRGASPHAVAKNGYTPLHIAAK----------  650 (838)
Q Consensus       583 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~--~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~----------  650 (838)
                      +..|+.+++++|+++|++++.+|..|.||||+|+.  .++.+++++|+++|++++..+..|+||||.|+.          
T Consensus       292 A~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~  371 (764)
T PHA02716        292 ARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDP  371 (764)
T ss_pred             HHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccc
Confidence            89999999999999999999999999999999865  467899999999999999999999999999875          


Q ss_pred             ----cCcHHHHHHHHhCCCCCCCCCCCCCcHHHH----HHHcCcHHHHHHHHhCCCCCCCCC--------CCCCc--HhH
Q psy3308         651 ----KNQMDIATTLLEYNAKPNAESKAGFTPLHL----SAQEGHTDMSSLLIEHGATVSHQA--------KNGLT--PLH  712 (838)
Q Consensus       651 ----~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~----A~~~g~~~iv~~Ll~~g~~~~~~~--------~~~~t--~l~  712 (838)
                          .++.+++++|+++|++++.++..|+||||.    |...++.+++++|++.|+......        ..+.+  .+|
T Consensus       372 ~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lh  451 (764)
T PHA02716        372 ETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIH  451 (764)
T ss_pred             cccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHH
Confidence                368999999999999999999999999994    334578999999999886533221        12222  356


Q ss_pred             HHHhcCCHH------------------HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH-----HHHHHHHHCCCCCccC
Q psy3308         713 LCAQEDKVN------------------VATITMFNGAEIDPVTKAGFTPLHIASHFGQL-----NMVRYLVENGANVNAT  769 (838)
Q Consensus       713 ~A~~~g~~~------------------i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~-----~~v~~Ll~~g~~~~~~  769 (838)
                      .++..+..+                  ++..++.++.+++..|..|+||||+|+..|+.     +++++|++.|+++|.+
T Consensus       452 h~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~  531 (764)
T PHA02716        452 HIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIP  531 (764)
T ss_pred             HHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCccc
Confidence            666554433                  33344456677888999999999999999886     4559999999999999


Q ss_pred             CCCCCcHHHHHHHhCcH-----HHHHHHHhCCCCCCCC
Q psy3308         770 TNLGYTPLHQASQQGRV-----LIIDLLLGAGAQPNAT  802 (838)
Q Consensus       770 ~~~g~t~l~~A~~~~~~-----~~v~~Ll~~ga~~~~~  802 (838)
                      |..|+||||+|+++|+.     ++|++|+++|++++..
T Consensus       532 d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~  569 (764)
T PHA02716        532 TKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIV  569 (764)
T ss_pred             CCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchH
Confidence            99999999999999976     9999999999998876

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=4.7e-44  Score=383.15  Aligned_cols=391  Identities=20%  Similarity=0.208  Sum_probs=269.3

Q ss_pred             HcCcHHHHHHHHHCC-CCCCcc-ccCCCcHHHHHHHc--CCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCC--HHHH
Q psy3308         104 QENHDGVVRYLLSKG-GNQTLA-TEHNITPLHVACKW--GKVAMVELLISKGANIEAKTRDGLTPLHCAARSGH--DNVI  177 (838)
Q Consensus       104 ~~g~~~~v~~L~~~~-~~~~~~-~~~~~~~l~~Aa~~--g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~--~~iv  177 (838)
                      ..+++++|++|+++| ++++.. +..|.||||.|+.+  |+.++|++|+++|++++.++..|.||||+|++.|+  .++|
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIV  230 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVI  230 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHH
Confidence            457778888888888 777777 77788888877543  56788888888888888888888888888888885  4788


Q ss_pred             HHHHHcCCCccCCCCCCccHHHHHH---hCCcHHHHHHHHhCCCCCCcccCCCccHH---HHHHhcCCHHHHHHHHHCCC
Q psy3308         178 DILIEKGAALYSKTKNGLAPLHMAS---QGDHEAATRVLIYHGAGVDEITVDYLTAL---HVASHCGHVRVAKTLLDRKA  251 (838)
Q Consensus       178 ~~L~~~~~~~~~~~~~~~~~l~~A~---~~g~~~~v~~L~~~~~~~~~~~~~~~~~l---~~A~~~g~~~iv~~L~~~~~  251 (838)
                      ++|++.|++++.++..|.|||++|+   .+++.++++.|++.+.... .. ....++   ..|+..|+.+++++|++.|+
T Consensus       231 klLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~-~~-~~~~~L~~~i~AA~~g~leiVklLLe~GA  308 (764)
T PHA02716        231 KKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNK-VK-NIPMILHSYITLARNIDISVVYSFLQPGV  308 (764)
T ss_pred             HHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccc-cc-cchhhhHHHHHHHHcCCHHHHHHHHhCCC
Confidence            8888888888888888888888764   4677888888877532211 11 111222   34677888888888888888


Q ss_pred             CccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH--------------cCCHHHH
Q psy3308         252 DPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACK--------------KNRYKVV  317 (838)
Q Consensus       252 ~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~--------------~g~~~~v  317 (838)
                      +++.++..|+||||+|+..+.      ++.+++++|++.|++++.++..|.||||.|+.              .++.+++
T Consensus       309 dIN~kD~~G~TPLH~Aaa~~~------~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVV  382 (764)
T PHA02716        309 KLHYKDSAGRTCLHQYILRHN------ISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVI  382 (764)
T ss_pred             ceeccCCCCCCHHHHHHHHhC------CCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHH
Confidence            888888888888887765321      24568888888888888888888888887764              2567777


Q ss_pred             HHHHhCCCCccccCCCCCcHHHH----HHHcCCHHHHHHHHHcCCCCCCCCC--------C--CCcHHHHHHHcCcHHHH
Q psy3308         318 ELLLKYGASIAATTESGLTPLHV----ASFMGCMNIAIFLLQAGAAPDTATV--------R--GETPLHLAARANQTDIV  383 (838)
Q Consensus       318 ~~L~~~~~~~~~~~~~~~~~l~~----A~~~g~~~iv~~Ll~~~~~~~~~~~--------~--~~~~l~~A~~~g~~~iv  383 (838)
                      ++|+++|++++..+..|.|||+.    |...++.+++++|++.++.......        .  ....++.++..+..++.
T Consensus       383 klLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~  462 (764)
T PHA02716        383 QCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTD  462 (764)
T ss_pred             HHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchh
Confidence            77777777777777777777762    2234567777777765543221110        0  11123333333333332


Q ss_pred             HHHHHCCCCccccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Q psy3308         384 RILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPL  463 (838)
Q Consensus       384 ~~Ll~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l  463 (838)
                      .++.+...                                         .......+++.+++..+.+++..+..|.|||
T Consensus       463 ~~~~~~~~-----------------------------------------~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPL  501 (764)
T PHA02716        463 LYTDEYEP-----------------------------------------YDSTKIHDVYHCAIIERYNNAVCETSGMTPL  501 (764)
T ss_pred             hhhhhhhh-----------------------------------------ccccccchhhHHHHHhhccccccCCCCCCHH
Confidence            22221110                                         0001122344454455566777888889999


Q ss_pred             HHHHHcCCH-----HHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcH-----HHHHHHHHCCCCCcccCCCCCcHHHHHH
Q psy3308         464 HVASRLGNG-----DIASLLLQHGASVDAPTKDGYTALHISAKEGQD-----EVASILTESGASITATTKKGFTPLHLAA  533 (838)
Q Consensus       464 ~~a~~~~~~-----~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~-----e~v~~L~~~~~~~~~~~~~~~~~l~~A~  533 (838)
                      |+|+..|+.     +++++|++.|++++.++..|.|||++|+++|+.     ++++.|+++|++++..      .+.+|.
T Consensus       502 h~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~------~l~~~~  575 (764)
T PHA02716        502 HVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIV------IIFLDK  575 (764)
T ss_pred             HHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchH------HHHHHh
Confidence            998888766     455889999999998899999999999988865     8889999888877654      477888


Q ss_pred             HcCCHHHHHHHHhCCC
Q psy3308         534 KYGRMKIAQMLLQKDA  549 (838)
Q Consensus       534 ~~g~~~~~~~Ll~~~~  549 (838)
                      .+++.+++..|..++.
T Consensus       576 ~~~~~~~~~ll~~~~~  591 (764)
T PHA02716        576 CYANGKFPSLLLSEDD  591 (764)
T ss_pred             hhhhhHHHHHHHHcch
Confidence            8888888888877654

>KOG0510|consensus

Probab=100.00  E-value=7.2e-44  Score=361.75  Aligned_cols=350  Identities=26%  Similarity=0.356  Sum_probs=318.8

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCC
Q psy3308         439 TDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASI  518 (838)
Q Consensus       439 ~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~  518 (838)
                      .|..+++++....+...+..|.+++|.++..+..      +..-......|..+.+++|.|+.....+.+++|++.|+++
T Consensus        41 dD~~tli~~kns~~~~~~~~gd~~~~~~~~~~y~------~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~  114 (929)
T KOG0510|consen   41 DDRHTLILEKNSSTPGKRAFGDTELHHASARNYI------LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGADT  114 (929)
T ss_pred             HHHHHHHHHhccccchhhhhchhHHHHHHhhcch------hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCCC
Confidence            3678888888778888888999999999987765      2333345667888999999999999999999999999999


Q ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy3308         519 TATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD  598 (838)
Q Consensus       519 ~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~  598 (838)
                      ..++..+.+|+|+|+..|+++.++.|++++.                 +++..+..+.||||.|+..++.+..+.|++.|
T Consensus       115 ~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~-----------------dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~  177 (929)
T KOG0510|consen  115 PLRNLNKNAPLHLAADSGNYSCLKLLLDYGA-----------------DVNLEDENGFTPLHLAARKNKVEAKKELINKG  177 (929)
T ss_pred             ChhhhhccCchhhccccchHHHHHHHHHhcC-----------------CccccccCCCchhhHHHhcChHHHHHHHHhcC
Confidence            9999999999999999999999999998764                 55777889999999999999999889999999


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh-----CCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCC-------
Q psy3308         599 APVDSQGKNGVTPLHVASHYDHQNVALLLLD-----RGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK-------  666 (838)
Q Consensus       599 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~-------  666 (838)
                      +++...+..|.+|+|.|+..|..++.+..+.     .+..+|..+..+.+|||.|++.|++++++.+++.|..       
T Consensus       178 a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~  257 (929)
T KOG0510|consen  178 ADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLD  257 (929)
T ss_pred             CCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhH
Confidence            9999999999999999999999999999988     6788899999999999999999999999999997643       


Q ss_pred             --------CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHh-CCC-CCCCC
Q psy3308         667 --------PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMF-NGA-EIDPV  736 (838)
Q Consensus       667 --------~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~-~~~-~~~~~  736 (838)
                              ++..|.+|.||||+|++.|+.++|+.|+..|++++.+++++.||||.||..|+.++|+-|++ .+. ..|..
T Consensus       258 ~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~  337 (929)
T KOG0510|consen  258 AMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNES  337 (929)
T ss_pred             HHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccc
Confidence                    34568899999999999999999999999999999999999999999999999999999998 443 45788


Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCc---cCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHH
Q psy3308         737 TKAGFTPLHIASHFGQLNMVRYLVENGANVN---ATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATI  811 (838)
Q Consensus       737 ~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~---~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~  811 (838)
                      |..|.||||.|++.||..+++.|+++|+...   ..|.+|.||||+|+..|+..+|++|+.+||++..+|..|.| +++
T Consensus       338 D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  338 DLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             cccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence            9999999999999999999999999999877   45999999999999999999999999999999999999999 885

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1e-42  Score=370.66  Aligned_cols=315  Identities=25%  Similarity=0.367  Sum_probs=203.8

Q ss_pred             HHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHH
Q psy3308         430 LHLAARANQTDIVRILLRNG-ASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVA  508 (838)
Q Consensus       430 l~~A~~~~~~~iv~~Ll~~~-~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v  508 (838)
                      +..|+..|+.+.++.|++.+ ..++..+..+.|||+.|+..|+.+++++|+++|++++..+..+.+||+.|+..|+.+++
T Consensus         5 l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv   84 (434)
T PHA02874          5 LRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDII   84 (434)
T ss_pred             HHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence            55555666666665555432 23344444555555555555555555555555555555555555555555555555555


Q ss_pred             HHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcH
Q psy3308         509 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRM  588 (838)
Q Consensus       509 ~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~  588 (838)
                      ++|++.|+++...                                                            +....+.
T Consensus        85 ~~Ll~~g~~~~~~------------------------------------------------------------~~~~~~~  104 (434)
T PHA02874         85 KLLIDNGVDTSIL------------------------------------------------------------PIPCIEK  104 (434)
T ss_pred             HHHHHCCCCCCcc------------------------------------------------------------hhccCCH
Confidence            5555555443210                                                            1112235


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy3308         589 KIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPN  668 (838)
Q Consensus       589 ~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~  668 (838)
                      +++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus       105 ~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n  184 (434)
T PHA02874        105 DMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYAN  184 (434)
T ss_pred             HHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC
Confidence            66777777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy3308         669 AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS  748 (838)
Q Consensus       669 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~  748 (838)
                      ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..++ +++++|+ .|++++.+|..|+||||+|+
T Consensus       185 ~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~  262 (434)
T PHA02874        185 VKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAI  262 (434)
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHH
Confidence            777777777777777777777777777777777777777777777776654 3445544 46677777777777777777


Q ss_pred             HcC-CHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhC-cHHHHHHHHhCCCCCCCCCCcc
Q psy3308         749 HFG-QLNMVRYLVENGANVNATTNLGYTPLHQASQQG-RVLIIDLLLGAGAQPNATTNLF  806 (838)
Q Consensus       749 ~~g-~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~-~~~~v~~Ll~~ga~~~~~~~~~  806 (838)
                      ..+ +.+++++|+++|++++..|..|.|||++|++.+ +.++++.|+++++..+..+..+
T Consensus       263 ~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~~~~~~~~~  322 (434)
T PHA02874        263 NPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVIKDIIANAVLIKEADKLK  322 (434)
T ss_pred             hcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCccHHHHHHHHhcCchhhccccc
Confidence            654 667777777777777777777777777777665 5667777777776665554444

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4.9e-41  Score=357.83  Aligned_cols=310  Identities=24%  Similarity=0.372  Sum_probs=214.4

Q ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHh
Q psy3308         423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKE  502 (838)
Q Consensus       423 ~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~  502 (838)
                      ...+.|||+.|+..|+.+++++|++.|++++..+..+.+||+.|+..|+.+++++|+++|+++...          +...
T Consensus        32 ~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~----------~~~~  101 (434)
T PHA02874         32 VDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSIL----------PIPC  101 (434)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcc----------hhcc
Confidence            446789999999999999999999999999999999999999999999999999999999876422          2233


Q ss_pred             CcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHH
Q psy3308         503 GQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLA  582 (838)
Q Consensus       503 ~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a  582 (838)
                      ...+++++|++.|++++.++..|.|||++                                                  |
T Consensus       102 ~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~--------------------------------------------------A  131 (434)
T PHA02874        102 IEKDMIKTILDCGIDVNIKDAELKTFLHY--------------------------------------------------A  131 (434)
T ss_pred             CCHHHHHHHHHCcCCCCCCCCCCccHHHH--------------------------------------------------H
Confidence            45677777877777776665555555554                                                  5


Q ss_pred             HHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHh
Q psy3308         583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLE  662 (838)
Q Consensus       583 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~  662 (838)
                      +..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++..+..|.||||.|+..|+.+++++|++
T Consensus       132 ~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~  211 (434)
T PHA02874        132 IKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLID  211 (434)
T ss_pred             HHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            55555555555566666666666666666666666666666666666666666666666666666666666666677666


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcC-CHHHHHHHHhCCCCCCCCCCCCC
Q psy3308         663 YNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQED-KVNVATITMFNGAEIDPVTKAGF  741 (838)
Q Consensus       663 ~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g-~~~i~~~L~~~~~~~~~~~~~g~  741 (838)
                      +|++++.++..|.||||.|+..++ +++.+|+ .|++++.++..|.||||+|+..+ +.+++++|+++|++++.+|..|+
T Consensus       212 ~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~  289 (434)
T PHA02874        212 HGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGE  289 (434)
T ss_pred             CCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCC
Confidence            666666666666677776666554 4455554 46666666666777777776654 56677777777777777777777


Q ss_pred             cHHHHHHHcC-CHHHHHHHHHCCCCCccCCCCC-CcHHHHHHHhCcHHHHHHHHh
Q psy3308         742 TPLHIASHFG-QLNMVRYLVENGANVNATTNLG-YTPLHQASQQGRVLIIDLLLG  794 (838)
Q Consensus       742 t~l~~A~~~g-~~~~v~~Ll~~g~~~~~~~~~g-~t~l~~A~~~~~~~~v~~Ll~  794 (838)
                      |||+.|+..+ +.++++.|+.+++.++..+..+ .+++..+....+.+..+++.+
T Consensus       290 TpL~~A~~~~~~~~~ik~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  344 (434)
T PHA02874        290 NPIDTAFKYINKDPVIKDIIANAVLIKEADKLKDSDFLEHIEIKDNKEFSDFIKE  344 (434)
T ss_pred             CHHHHHHHhCCccHHHHHHHHhcCchhhccccchhHHHHHHHHhccchHHHHHHH
Confidence            7777776665 5566677776666554444333 444555555555555444444

>KOG0510|consensus

Probab=100.00  E-value=9.8e-42  Score=346.31  Aligned_cols=366  Identities=30%  Similarity=0.390  Sum_probs=299.3

Q ss_pred             HHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCc
Q psy3308         314 YKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASV  393 (838)
Q Consensus       314 ~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~  393 (838)
                      .|.++++.+........+..|.+++|.|+..+..      ++.-......|..+.+|+++|++....+.|++|++.|+++
T Consensus        41 dD~~tli~~kns~~~~~~~~gd~~~~~~~~~~y~------~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~  114 (929)
T KOG0510|consen   41 DDRHTLILEKNSSTPGKRAFGDTELHHASARNYI------LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGADT  114 (929)
T ss_pred             HHHHHHHHHhccccchhhhhchhHHHHHHhhcch------hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCCC
Confidence            3678888887777778888999999999987754      3333445567778889999999999999999999999998


Q ss_pred             cccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy3308         394 DARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGD  473 (838)
Q Consensus       394 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~  473 (838)
                      ...+..                          +.+|+|+|+..++.++++.|+++|++++..+..+.||||.|+..++.|
T Consensus       115 ~~~n~~--------------------------~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E  168 (929)
T KOG0510|consen  115 PLRNLN--------------------------KNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVE  168 (929)
T ss_pred             Chhhhh--------------------------ccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHH
Confidence            877654                          456788899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHH-----CCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy3308         474 IASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTE-----SGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD  548 (838)
Q Consensus       474 ~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~-----~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~  548 (838)
                      ..+.|++.|+++...+..++.|+|.|+.+|..|..+.++.     .+..++.-+..+.+|||.|+..|+.++++.+++.+
T Consensus       169 ~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~  248 (929)
T KOG0510|consen  169 AKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNG  248 (929)
T ss_pred             HHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCc
Confidence            8899999999999999999999999999999999999987     67778888889999999999999999999999988


Q ss_pred             CCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy3308         549 APVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLL  628 (838)
Q Consensus       549 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll  628 (838)
                      ........-  .......-++..|.+|.||||+|++.|+++.++.|+..|++++.++.++.+|||.|+.+|+.+.++-|+
T Consensus       249 ~~~a~~~~~--~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL  326 (929)
T KOG0510|consen  249 KKIADVQLD--AMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLL  326 (929)
T ss_pred             cccchhhhH--HHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHH
Confidence            765533210  001111124556778888888888888888888888888888888888888888888888888888888


Q ss_pred             h-CC-CCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCC---CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC
Q psy3308         629 D-RG-ASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPN---AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQ  703 (838)
Q Consensus       629 ~-~g-~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~---~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~  703 (838)
                      + .| ...+..|..|.||||.|+.+||..+++.|++.|+...   ..|.+|.||||.|+..|+..+|++|+.+|+++...
T Consensus       327 ~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~  406 (929)
T KOG0510|consen  327 QESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVK  406 (929)
T ss_pred             hCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeec
Confidence            7 32 3455566678888888888888888888888887765   34777888888888888888888888888888888


Q ss_pred             CCCCCcHhHH
Q psy3308         704 AKNGLTPLHL  713 (838)
Q Consensus       704 ~~~~~t~l~~  713 (838)
                      ++.|.++++.
T Consensus       407 n~~g~SA~~~  416 (929)
T KOG0510|consen  407 NKKGKSAFDT  416 (929)
T ss_pred             cccccccccc
Confidence            8888888775

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=4.1e-40  Score=358.06  Aligned_cols=289  Identities=27%  Similarity=0.360  Sum_probs=190.0

Q ss_pred             HHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhC---cHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcC-CHHH
Q psy3308         465 VASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEG---QDEVASILTESGASITATTKKGFTPLHLAAKYG-RMKI  540 (838)
Q Consensus       465 ~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~---~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g-~~~~  540 (838)
                      .+...++.+++++|+++|++++..+..|.||||.|+..+   +.+++++|++.|++++.++..|.||||+|+..| +.++
T Consensus        20 ~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~i   99 (471)
T PHA03095         20 LNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDV   99 (471)
T ss_pred             HcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHH
Confidence            345566777777777777777777777777777777776   777777777777777777777777777777776 4666


Q ss_pred             HHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHH--HcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy3308         541 AQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAA--KYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY  618 (838)
Q Consensus       541 ~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~--~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~  618 (838)
                      +++|++.+.                 +++..+..|.||||.|+  ..++.+++++|+++|++++..+..|.||||.|+..
T Consensus       100 v~lLl~~ga-----------------~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~  162 (471)
T PHA03095        100 IKLLIKAGA-----------------DVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKS  162 (471)
T ss_pred             HHHHHHcCC-----------------CCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence            666665433                 34556666666666666  34456666666666666666666666666666655


Q ss_pred             C--CHHHHHHHHhCCCCCCccCCCCChHHHHHHHc--CcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcH--HHHHH
Q psy3308         619 D--HQNVALLLLDRGASPHAVAKNGYTPLHIAAKK--NQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHT--DMSSL  692 (838)
Q Consensus       619 ~--~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~--~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~--~iv~~  692 (838)
                      +  +.+++++|+++|++++..+..|.||||.|+..  ++.++++.|++.|++++.+|..|.||||+|+..|+.  .+++.
T Consensus       163 ~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~  242 (471)
T PHA03095        163 RNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLP  242 (471)
T ss_pred             CCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHH
Confidence            4  45666666666666666666666666666643  556666666666666666666666666666666643  45666


Q ss_pred             HHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCC
Q psy3308         693 LIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATT  770 (838)
Q Consensus       693 Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~  770 (838)
                      |++.|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|+|||++|+..|+.+++++|++++++++..+
T Consensus       243 ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~~~  320 (471)
T PHA03095        243 LLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETVA  320 (471)
T ss_pred             HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHHHH
Confidence            666666666666666666666666666666666666666666666666666666666666666666666666655443

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.6e-40  Score=359.55  Aligned_cols=289  Identities=28%  Similarity=0.353  Sum_probs=271.1

Q ss_pred             hhhcCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcC---cHHHHHHHHHCCCCCCccccCCCcHHHHHHHcC-CHHHH
Q psy3308          69 FEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQEN---HDGVVRYLLSKGGNQTLATEHNITPLHVACKWG-KVAMV  144 (838)
Q Consensus        69 ~~~~g~~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~~g---~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g-~~~iv  144 (838)
                      ++..+++++|++|+++|++++.++..|.||||+|+..|   +.+++++|+++|++++..+..|.||||+|+..| +.+++
T Consensus        21 ~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv  100 (471)
T PHA03095         21 NASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVI  100 (471)
T ss_pred             cCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHH
Confidence            56788999999999999999999999999999999999   999999999999999999999999999999999 59999


Q ss_pred             HHHHHcCCCCccccCCCCcHHHHHH--HcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCC--cHHHHHHHHhCCCCC
Q psy3308         145 ELLISKGANIEAKTRDGLTPLHCAA--RSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGD--HEAATRVLIYHGAGV  220 (838)
Q Consensus       145 ~~L~~~~~~~~~~~~~~~tal~~A~--~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g--~~~~v~~L~~~~~~~  220 (838)
                      ++|+++|++++..+..|.||||+|+  ..++.+++++|++.|++++..+..|.|||++|+..+  +.+++++|+++|+++
T Consensus       101 ~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~  180 (471)
T PHA03095        101 KLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADV  180 (471)
T ss_pred             HHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCC
Confidence            9999999999999999999999999  567899999999999999999999999999998765  689999999999999


Q ss_pred             CcccCCCccHHHHHHhc--CCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCC
Q psy3308         221 DEITVDYLTALHVASHC--GHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARA  298 (838)
Q Consensus       221 ~~~~~~~~~~l~~A~~~--g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~  298 (838)
                      +..+..+.||||+|+..  ++.+++++|++.|++++..+..|.||||+|+..+..      ...+++.|++.|++++.++
T Consensus       181 ~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~------~~~~v~~ll~~g~din~~d  254 (471)
T PHA03095        181 YAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSC------KRSLVLPLLIAGISINARN  254 (471)
T ss_pred             cccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCc------hHHHHHHHHHcCCCCCCcC
Confidence            88888999999999875  789999999999999999999999999999998743      3468899999999999999


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy3308         299 LNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTA  363 (838)
Q Consensus       299 ~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~  363 (838)
                      ..|.||||.|+..|+.+++++|++.|++++..+..|.|||+.|+.+|+.+++++|++.+++++..
T Consensus       255 ~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~~  319 (471)
T PHA03095        255 RYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETV  319 (471)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999988776543

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=5.8e-40  Score=357.43  Aligned_cols=281  Identities=30%  Similarity=0.433  Sum_probs=244.1

Q ss_pred             HHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHH---
Q psy3308         505 DEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHL---  581 (838)
Q Consensus       505 ~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~---  581 (838)
                      .++++++++.+...+..+..+.+||+.|+..|+.+++++|++.|.+                 ++..+..+.+|++.   
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~-----------------~~~~~~~~~t~L~~~~~   77 (480)
T PHA03100         15 VKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGAD-----------------INSSTKNNSTPLHYLSN   77 (480)
T ss_pred             HHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCC-----------------CCCccccCcCHHHHHHH
Confidence            3555666655544555556666666666666666666666665443                 23344566677777   


Q ss_pred             --HHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHH--HcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcC--cHH
Q psy3308         582 --AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVAS--HYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKN--QMD  655 (838)
Q Consensus       582 --a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~--~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~--~~~  655 (838)
                        |+..++.+++++|+++|++++..+..|.|||++|+  ..|+.+++++|+++|++++..+..|.||||.|+..|  +.+
T Consensus        78 ~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~  157 (480)
T PHA03100         78 IKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLK  157 (480)
T ss_pred             HHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHH
Confidence              88899999999999999999999999999999999  999999999999999999999999999999999999  999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCC------CcHhHHHHhcCC--HHHHHHHH
Q psy3308         656 IATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG------LTPLHLCAQEDK--VNVATITM  727 (838)
Q Consensus       656 iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~------~t~l~~A~~~g~--~~i~~~L~  727 (838)
                      ++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|      .||||.|+..|+  .+++++|+
T Consensus       158 iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll  237 (480)
T PHA03100        158 ILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLL  237 (480)
T ss_pred             HHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999888888      899999999999  99999999


Q ss_pred             hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCC
Q psy3308         728 FNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT  802 (838)
Q Consensus       728 ~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~  802 (838)
                      ++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.|||++|++.++.+++++|+++|++++..
T Consensus       238 ~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~i  312 (480)
T PHA03100        238 SYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKTI  312 (480)
T ss_pred             HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999988764

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4.6e-39  Score=350.36  Aligned_cols=289  Identities=31%  Similarity=0.459  Sum_probs=245.1

Q ss_pred             cCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHH-----HHHcCCHHHHHH
Q psy3308          72 TGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHV-----ACKWGKVAMVEL  146 (838)
Q Consensus        72 ~g~~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~-----Aa~~g~~~iv~~  146 (838)
                      ....++++++++.+...+..+..+.||||.|+..|+.++|++|+++|++++..+..+.|||++     |+..|+.++|++
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~   91 (480)
T PHA03100         12 IIKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKL   91 (480)
T ss_pred             HHHHHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHH
Confidence            345678899998887777888899999999999999999999999999999999999999999     999999999999


Q ss_pred             HHHcCCCCccccCCCCcHHHHHH--HcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCC--cHHHHHHHHhCCCCCCc
Q psy3308         147 LISKGANIEAKTRDGLTPLHCAA--RSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGD--HEAATRVLIYHGAGVDE  222 (838)
Q Consensus       147 L~~~~~~~~~~~~~~~tal~~A~--~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g--~~~~v~~L~~~~~~~~~  222 (838)
                      |+++|++++..+..|.|||++|+  ..|+.++|++|++.|++++..+..|.+||++|+..|  +.+++++|+++|++++.
T Consensus        92 Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~  171 (480)
T PHA03100         92 LLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINA  171 (480)
T ss_pred             HHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCccc
Confidence            99999999999999999999999  999999999999999999888999999999999999  99999999999999988


Q ss_pred             ccCCCccHHHHHHhcCCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCC
Q psy3308         223 ITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGF  302 (838)
Q Consensus       223 ~~~~~~~~l~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~  302 (838)
                      .+..|.|||++|+..|+.+++++|+++|++++..+..+.++++.                                   .
T Consensus       172 ~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~-----------------------------------~  216 (480)
T PHA03100        172 KNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIF-----------------------------------E  216 (480)
T ss_pred             ccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHH-----------------------------------H
Confidence            88889999999999999999999999999888887777444432                                   3


Q ss_pred             cHHHHHHHcCC--HHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcH
Q psy3308         303 TPLHIACKKNR--YKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQT  380 (838)
Q Consensus       303 ~~l~~A~~~g~--~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~  380 (838)
                      ||||.|+..|+  .+++++|+++|++++.++..|.||||+|+..|+.+++++|++.|++++..+..|.||+++|+..++.
T Consensus       217 t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~  296 (480)
T PHA03100        217 TPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNK  296 (480)
T ss_pred             hHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCH
Confidence            56777777777  7777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHHHHCCCCccc
Q psy3308         381 DIVRILLRNGASVDA  395 (838)
Q Consensus       381 ~iv~~Ll~~g~~~~~  395 (838)
                      +++++|+++|++++.
T Consensus       297 ~iv~~Ll~~g~~i~~  311 (480)
T PHA03100        297 EIFKLLLNNGPSIKT  311 (480)
T ss_pred             HHHHHHHhcCCCHHH
Confidence            777777777776554

>KOG0508|consensus

Probab=100.00  E-value=4.5e-39  Score=305.82  Aligned_cols=215  Identities=30%  Similarity=0.452  Sum_probs=182.3

Q ss_pred             CCchHHHHHHHhhcCC---------CCCCCCcHHhHHHhcCCHHHHHHHHhccccccchhhcccCcchhhhccchhhhhc
Q psy3308           2 QQGHDRVVAVLLENDT---------KGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEAT   72 (838)
Q Consensus         2 ~~g~~~iv~~l~~~~~---------~~~~~~~al~~Aa~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (838)
                      +.|.+..++-|+.+.+         ....+.+||-+||++||.++|+||++.-      ..+.              .+.
T Consensus        13 ~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~------~a~~--------------e~~   72 (615)
T KOG0508|consen   13 RDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHC------RASP--------------EQG   72 (615)
T ss_pred             hhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHh------cCCc--------------cCC
Confidence            4566666666665532         1223558999999999999999999821      1100              011


Q ss_pred             CcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy3308          73 GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGA  152 (838)
Q Consensus        73 g~~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~  152 (838)
                      |.           ..++-....|-+||+.|+..||+++||.|+++|+++|.++..+.|||--||.-||+||||||+++|+
T Consensus        73 Gs-----------V~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~ga  141 (615)
T KOG0508|consen   73 GS-----------VRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGA  141 (615)
T ss_pred             ce-----------EEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCC
Confidence            11           1223345678899999999999999999999999999998889999999999999999999999999


Q ss_pred             CCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHH
Q psy3308         153 NIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALH  232 (838)
Q Consensus       153 ~~~~~~~~~~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~  232 (838)
                      +++..++.|.|+||.||..||.+|++||++.|++++.++..|+||||.|+..|++|++|+|+.+|+.++ .+..|.|||.
T Consensus       142 d~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~  220 (615)
T KOG0508|consen  142 DPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLL  220 (615)
T ss_pred             CCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999876 4667999999


Q ss_pred             HHHhcCCHHHHHHHHH
Q psy3308         233 VASHCGHVRVAKTLLD  248 (838)
Q Consensus       233 ~A~~~g~~~iv~~L~~  248 (838)
                      .|+..|+.++|.+|++
T Consensus       221 ~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  221 LAAVTGHTDIVERLLQ  236 (615)
T ss_pred             HHhhhcchHHHHHHhc
Confidence            9999999999999997

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.2e-38  Score=343.59  Aligned_cols=294  Identities=21%  Similarity=0.305  Sum_probs=181.8

Q ss_pred             CChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCcccc
Q psy3308         492 GYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITAT  571 (838)
Q Consensus       492 ~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~  571 (838)
                      +.+|||.|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++......                   
T Consensus        37 ~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~-------------------   97 (477)
T PHA02878         37 PFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCS-------------------   97 (477)
T ss_pred             CcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccc-------------------
Confidence            3444444444444444444444444444444444455555554444444444444321110                   


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc--CCHHHHHHHHhCCCCCCccCCC-CChHHHHH
Q psy3308         572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY--DHQNVALLLLDRGASPHAVAKN-GYTPLHIA  648 (838)
Q Consensus       572 ~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~-~~t~L~~A  648 (838)
                      ...+.++++.|+..++.+++++|+..+.+.+... + ...+......  ...+++++|+++|++++..+.. |.||||+|
T Consensus        98 ~~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~-~-~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A  175 (477)
T PHA02878         98 VFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTI-D-LVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYA  175 (477)
T ss_pred             cccchhhHHHHHHcCCHHHHHHHHhCcccCcccC-c-HHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHH
Confidence            0123345555555555555555555433221110 0 0001111111  1234777777777777777776 77777777


Q ss_pred             HHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhc-CCHHHHHHHH
Q psy3308         649 AKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQE-DKVNVATITM  727 (838)
Q Consensus       649 ~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~-g~~~i~~~L~  727 (838)
                      +..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++.++..|.||||+|+.. ++.+++++|+
T Consensus       176 ~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll  255 (477)
T PHA02878        176 TENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLL  255 (477)
T ss_pred             HhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHH
Confidence            777777777777777777777777777777777777777777777777777777777777777777764 5777777777


Q ss_pred             hCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhC-cHHHHHHHHhC-----CCCCC
Q psy3308         728 FNGAEIDPVTK-AGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQG-RVLIIDLLLGA-----GAQPN  800 (838)
Q Consensus       728 ~~~~~~~~~~~-~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~-~~~~v~~Ll~~-----ga~~~  800 (838)
                      ++|++++.++. .|+||||+|  .++.+++++|+++|+++|..|..|.|||++|++.+ ..+++++|+.+     +++++
T Consensus       256 ~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~~~~~  333 (477)
T PHA02878        256 EHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKRIKPD  333 (477)
T ss_pred             HcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHhccCc
Confidence            77777777664 677888877  45677788888888888887777888888887653 45566666543     46677


Q ss_pred             CCCCccch
Q psy3308         801 ATTNLFCC  808 (838)
Q Consensus       801 ~~~~~~~~  808 (838)
                      .++..|-.
T Consensus       334 ~~~~~g~~  341 (477)
T PHA02878        334 IKNSEGFI  341 (477)
T ss_pred             ccCcHHHH
Confidence            77766644

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.2e-37  Score=322.62  Aligned_cols=429  Identities=14%  Similarity=0.125  Sum_probs=295.9

Q ss_pred             HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHhCCCCccccCCCCCcHHHH-HHHcCCHHHHHHHHHcCCCC
Q psy3308         283 VAKTLLDRKADPNARALNGFTPLHIACKKNR-YKVVELLLKYGASIAATTESGLTPLHV-ASFMGCMNIAIFLLQAGAAP  360 (838)
Q Consensus       283 i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~-~~~v~~L~~~~~~~~~~~~~~~~~l~~-A~~~g~~~iv~~Ll~~~~~~  360 (838)
                      -.+.|+++|++|-. ...+.|||+.-..+.+ ..-++.++..+..++..+.++.+++++ |+.+|++|+|++|+++|+++
T Consensus        20 ~~~~l~~~g~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdv   98 (631)
T PHA02792         20 SAQSLIESGANPLY-EYDGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEI   98 (631)
T ss_pred             HHHHHHHcCCCccc-ccCCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCc
Confidence            36789999999988 5778899998876654 344667777777788888899999976 56789999999999999999


Q ss_pred             CCCCCCCCcHHHHHHH-cCcHHHHHHHHHCCCCccccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCH
Q psy3308         361 DTATVRGETPLHLAAR-ANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQT  439 (838)
Q Consensus       361 ~~~~~~~~~~l~~A~~-~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~  439 (838)
                      +..+..+.+++++|+. .++.|++++|+++|+++.+.+..|.||+........+-                         
T Consensus        99 N~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~-------------------------  153 (631)
T PHA02792         99 NSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYY-------------------------  153 (631)
T ss_pred             ccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhccccccc-------------------------
Confidence            9999888999999965 69999999999999999888888887765433211110                         


Q ss_pred             HHHHHH--HHCCCCCCCCCCCCCcHHHHHHHcC-------CHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhC--cHHHH
Q psy3308         440 DIVRIL--LRNGASVDARAREDQTPLHVASRLG-------NGDIASLLLQHGASVDAPTKDGYTALHISAKEG--QDEVA  508 (838)
Q Consensus       440 ~iv~~L--l~~~~~~~~~~~~~~~~l~~a~~~~-------~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~--~~e~v  508 (838)
                      +--..+  -+.+..++..+..|.||||+|+..+       +.++++.|+++|++++..|..|.||||+|+.+.  ..|++
T Consensus       154 ~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~  233 (631)
T PHA02792        154 NWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIF  233 (631)
T ss_pred             chhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHH
Confidence            000000  0113344566777888888888887       788888888888888888888888888888887  77888


Q ss_pred             HHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcH
Q psy3308         509 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRM  588 (838)
Q Consensus       509 ~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~  588 (838)
                      ++|++...+..    ..+           --+..||..+....+                               ..-+.
T Consensus       234 ~~L~~~~~~~~----~~~-----------~~l~~y~~~~~~~~~-------------------------------~~id~  267 (631)
T PHA02792        234 DALFDSNYSGN----ELM-----------NILSNYLRKQYRNKN-------------------------------HKIDN  267 (631)
T ss_pred             HHHHhcccccc----chH-----------hHHHHHHHHHhccCc-------------------------------cCccH
Confidence            88876411110    000           011122221110000                               00013


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHhCCCCCCccCCCCChHHHHHHHcC--cHHHHHHHHhCCC
Q psy3308         589 KIAQMLLQKDAPVDSQGKNGVTPLHVASHYDH-QNVALLLLDRGASPHAVAKNGYTPLHIAAKKN--QMDIATTLLEYNA  665 (838)
Q Consensus       589 ~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~--~~~iv~~Ll~~~~  665 (838)
                      .+|..|++.+-.-+.        +........ ..+...|....       ..-+..||.=...+  +.+++++|+++|+
T Consensus       268 ~iv~~ll~~~~~~~i--------~~~~~~~~~~~~~~~~~~~~~-------~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga  332 (631)
T PHA02792        268 YIVDKLLSGHDTFYI--------LELCNSLRNNIIISSILKRYT-------DSIQDLLSEYVSYHTVYINVIKCMIDEGA  332 (631)
T ss_pred             HHHHHHHhCCCccch--------hhhhhhhhhhhHHHHHHHHHh-------HHHHHHHHHHHhcCCccHHHHHHHHHCCC
Confidence            366666655432111        111111111 11111111110       01123344444444  5788899998888


Q ss_pred             CCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCC--CcHhHHHHhcCCH---HHHHHHHhCCCCCCCCCCCC
Q psy3308         666 KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG--LTPLHLCAQEDKV---NVATITMFNGAEIDPVTKAG  740 (838)
Q Consensus       666 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~--~t~l~~A~~~g~~---~i~~~L~~~~~~~~~~~~~g  740 (838)
                      +...  .....+++.|+..|+.++|++|+++|++++.++..|  .||||.|+.....   +++++|+++|+++|.+|..|
T Consensus       333 ~~~r--~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G  410 (631)
T PHA02792        333 TLYR--FKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHG  410 (631)
T ss_pred             cccc--CCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccC
Confidence            7642  224567888888899999999999999988887664  5888887776654   35788889999999999999


Q ss_pred             CcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHH----------hCcHHHHHHHHhCCCCCC
Q psy3308         741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQ----------QGRVLIIDLLLGAGAQPN  800 (838)
Q Consensus       741 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~----------~~~~~~v~~Ll~~ga~~~  800 (838)
                      +||||+|+..++.+++++|+++|++++.+|..|.|||++|+.          ....+++++|+++|.++.
T Consensus       411 ~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~  480 (631)
T PHA02792        411 RSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE  480 (631)
T ss_pred             cchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence            999999999999999999999999999999999999999875          223567999999987765

>KOG0508|consensus

Probab=100.00  E-value=5.1e-38  Score=298.68  Aligned_cols=155  Identities=38%  Similarity=0.534  Sum_probs=121.0

Q ss_pred             CCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHHHCCCCccccccCCCchHHHHHhhC
Q psy3308         192 KNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKN  271 (838)
Q Consensus       192 ~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~  271 (838)
                      ..|..||-.|+..||+++||.|+++|+++|..+....|||-.|+.-||+|+||||+++|+|++..+..|.|.|+.||.+|
T Consensus        82 IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykG  161 (615)
T KOG0508|consen   82 IEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKG  161 (615)
T ss_pred             cCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccC
Confidence            34555666666666666666666666666666666667777777788888888888878888877777888888877776


Q ss_pred             CccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHH
Q psy3308         272 RYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAI  351 (838)
Q Consensus       272 ~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~  351 (838)
                              |.+|+++|++.|+++|.++..|.|+||.+++.|++|++|+|+++|+.++ .+..|.|||..|+..|+.++|+
T Consensus       162 --------h~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~~~iVe  232 (615)
T KOG0508|consen  162 --------HVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLLLAAVTGHTDIVE  232 (615)
T ss_pred             --------chHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHHHHhhhcchHHHH
Confidence                    6778888888888888888888888999999999999999998888875 4556889999999999999999


Q ss_pred             HHHH
Q psy3308         352 FLLQ  355 (838)
Q Consensus       352 ~Ll~  355 (838)
                      +|++
T Consensus       233 ~L~~  236 (615)
T KOG0508|consen  233 RLLQ  236 (615)
T ss_pred             HHhc
Confidence            8886

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=9.7e-38  Score=337.22  Aligned_cols=283  Identities=20%  Similarity=0.310  Sum_probs=205.7

Q ss_pred             CCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHh--CcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy3308         470 GNGDIASLLLQHGASVDAPTKDGYTALHISAKE--GQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK  547 (838)
Q Consensus       470 ~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~--~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~  547 (838)
                      ...+++++|+++|+++|.. ..|.++++.++..  ++.+++++|+++|++++.++ .+.|||+.|+..+..         
T Consensus        14 ~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~---------   82 (494)
T PHA02989         14 VDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREI---------   82 (494)
T ss_pred             CcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCc---------
Confidence            4556666666666666655 3455555543332  24566666666666666543 345555544432210         


Q ss_pred             CCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc---CCHHHH
Q psy3308         548 DAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY---DHQNVA  624 (838)
Q Consensus       548 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~---~~~~~v  624 (838)
                                                         ...++.+++++|+++|+++|.++..|.|||+.|+..   ++.+++
T Consensus        83 -----------------------------------~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv  127 (494)
T PHA02989         83 -----------------------------------TSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDML  127 (494)
T ss_pred             -----------------------------------chhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHH
Confidence                                               012456788888888888888888888888877654   567888


Q ss_pred             HHHHhCCCCC-CccCCCCChHHHHHHHc--CcHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcC----cHHHHHHHHhC
Q psy3308         625 LLLLDRGASP-HAVAKNGYTPLHIAAKK--NQMDIATTLLEYNAKPNA-ESKAGFTPLHLSAQEG----HTDMSSLLIEH  696 (838)
Q Consensus       625 ~~Ll~~g~~~-~~~~~~~~t~L~~A~~~--~~~~iv~~Ll~~~~~~~~-~~~~g~t~L~~A~~~g----~~~iv~~Ll~~  696 (838)
                      ++|+++|+++ +..+..|.||||.|+..  ++.++|++|+++|++++. .+..|.|||+.|++.+    +.+++++|+++
T Consensus       128 ~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~  207 (494)
T PHA02989        128 RFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKK  207 (494)
T ss_pred             HHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhC
Confidence            8888888888 67778888888887654  577888888888888877 5677888888877654    78888888888


Q ss_pred             CCCCCCCCCCCCcHhHHHHhc------CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCC
Q psy3308         697 GATVSHQAKNGLTPLHLCAQE------DKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATT  770 (838)
Q Consensus       697 g~~~~~~~~~~~t~l~~A~~~------g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~  770 (838)
                      |++++..+..+.++|+.++..      +..+++++|.. ++++|.+|..|+||||+|+..|+.+++++|+++|+++|.+|
T Consensus       208 Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d  286 (494)
T PHA02989        208 GVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVS  286 (494)
T ss_pred             CCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccC
Confidence            888888887788888876654      34567776654 68888888888888888888888888888888888888888


Q ss_pred             CCCCcHHHHHHHhCcHHHHHHHHhCCCCC
Q psy3308         771 NLGYTPLHQASQQGRVLIIDLLLGAGAQP  799 (838)
Q Consensus       771 ~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~  799 (838)
                      ..|+|||++|++.|+.++|++|++.+...
T Consensus       287 ~~G~TpL~~A~~~~~~~iv~~LL~~~p~~  315 (494)
T PHA02989        287 KDGDTVLTYAIKHGNIDMLNRILQLKPGK  315 (494)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhcCCCh
Confidence            88888888888888888888888876543

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.4e-37  Score=300.98  Aligned_cols=236  Identities=17%  Similarity=0.204  Sum_probs=212.8

Q ss_pred             cCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy3308         535 YGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHV  614 (838)
Q Consensus       535 ~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~  614 (838)
                      +++.+++++|.+++.                   +..|..|.||||+|+..|+.+++++|++.|++++..+  +.||||+
T Consensus         9 ~~~~~~~~~Lis~~a-------------------~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~   67 (284)
T PHA02791          9 WKSKQLKSFLSSKDA-------------------FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQ   67 (284)
T ss_pred             cCHHHHHHHHHhCCC-------------------CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHH
Confidence            456778888887654                   3457789999999999999999999999999988764  6899999


Q ss_pred             HHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCC-cHHHHHHHcCcHHHHHHH
Q psy3308         615 ASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGF-TPLHLSAQEGHTDMSSLL  693 (838)
Q Consensus       615 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~-t~L~~A~~~g~~~iv~~L  693 (838)
                      |+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++..+..|+ |||++|+..|+.++|++|
T Consensus        68 Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~L  147 (284)
T PHA02791         68 AATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYF  147 (284)
T ss_pred             HHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999888885 899999999999999999


Q ss_pred             HhCCCCCCCCC-CCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcH-HHHHHHcCCHHHHHHHHHCCCCCccCCC
Q psy3308         694 IEHGATVSHQA-KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTP-LHIASHFGQLNMVRYLVENGANVNATTN  771 (838)
Q Consensus       694 l~~g~~~~~~~-~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~-l~~A~~~g~~~~v~~Ll~~g~~~~~~~~  771 (838)
                      ++++++.  .+ ..|.||||+|+..|+.+++++|+++|++++.++..|.|| ||+|+..|+.++|++|+++|+++|.+|.
T Consensus       148 L~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~  225 (284)
T PHA02791        148 LSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNL  225 (284)
T ss_pred             HhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcc
Confidence            9987643  23 358999999999999999999999999999999999987 9999999999999999999999999998


Q ss_pred             CCCcHHHHHHHhCcHHHHHHHHhCCCCCC
Q psy3308         772 LGYTPLHQASQQGRVLIIDLLLGAGAQPN  800 (838)
Q Consensus       772 ~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~  800 (838)
                      .| ++|      ++.|++++|+++-++..
T Consensus       226 ~~-~~l------~~~e~~~~ll~~~~~~~  247 (284)
T PHA02791        226 EN-VLL------DDAEIAKMIIEKHVEYK  247 (284)
T ss_pred             cC-ccC------CCHHHHHHHHHhhhhhc
Confidence            54 555      89999999999877654

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=3.9e-37  Score=331.83  Aligned_cols=306  Identities=26%  Similarity=0.311  Sum_probs=260.4

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHH
Q psy3308         455 RAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAK  534 (838)
Q Consensus       455 ~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~  534 (838)
                      ....+.+|||.|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|++.+.....  ..+.++++.|+.
T Consensus        33 ~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~~l~~a~~  110 (477)
T PHA02878         33 ASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV--FYTLVAIKDAFN  110 (477)
T ss_pred             ccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc--ccchhhHHHHHH
Confidence            344677899999999999999999999999999999999999999999999999999987655443  456789999999


Q ss_pred             cCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHH--cCcHHHHHHHHhCCCCCCCCCCC-CCcH
Q psy3308         535 YGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK--YGRMKIAQMLLQKDAPVDSQGKN-GVTP  611 (838)
Q Consensus       535 ~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~--~~~~~~v~~Ll~~~~~~~~~~~~-~~~~  611 (838)
                      .++.+++++|+..+.........                   ..+.....  ....+++++|+++|++++..+.. |.||
T Consensus       111 ~~~~ei~~~Ll~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tp  171 (477)
T PHA02878        111 NRNVEIFKIILTNRYKNIQTIDL-------------------VYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTA  171 (477)
T ss_pred             cCCHHHHHHHHhCcccCcccCcH-------------------HHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCH
Confidence            99999999998764322111000                   01111111  12356999999999999999988 9999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc-CcHHHH
Q psy3308         612 LHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQE-GHTDMS  690 (838)
Q Consensus       612 l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~-g~~~iv  690 (838)
                      ||+|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++.++..|.||||+|+.. ++.+++
T Consensus       172 Lh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv  251 (477)
T PHA02878        172 LHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDIL  251 (477)
T ss_pred             HHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999976 789999


Q ss_pred             HHHHhCCCCCCCCCC-CCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHHC-----C
Q psy3308         691 SLLIEHGATVSHQAK-NGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG-QLNMVRYLVEN-----G  763 (838)
Q Consensus       691 ~~Ll~~g~~~~~~~~-~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g-~~~~v~~Ll~~-----g  763 (838)
                      ++|+++|++++.++. .|.||||.|  .++.+++++|+++|+++|.+|..|.|||++|+..+ +.+++++|+.+     +
T Consensus       252 ~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~  329 (477)
T PHA02878        252 KLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKR  329 (477)
T ss_pred             HHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHh
Confidence            999999999999876 799999999  56789999999999999999999999999999754 57788888765     4


Q ss_pred             CCCccCCCCCCcHHHHHHHh
Q psy3308         764 ANVNATTNLGYTPLHQASQQ  783 (838)
Q Consensus       764 ~~~~~~~~~g~t~l~~A~~~  783 (838)
                      .+++..+..|.++-+.++..
T Consensus       330 ~~~~~~~~~g~~~n~~~i~~  349 (477)
T PHA02878        330 IKPDIKNSEGFIDNMDCITS  349 (477)
T ss_pred             ccCcccCcHHHHHHHHHHhc
Confidence            67888888887766555543

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=6.2e-37  Score=330.96  Aligned_cols=284  Identities=22%  Similarity=0.306  Sum_probs=241.3

Q ss_pred             hhcCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHc--CcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcC------CH
Q psy3308          70 EATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQE--NHDGVVRYLLSKGGNQTLATEHNITPLHVACKWG------KV  141 (838)
Q Consensus        70 ~~~g~~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~~--g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g------~~  141 (838)
                      ......++|++|+++|+++|.+ ..|.|+|+.++..  ++.++|++|+++|++++..+ .+.|||+.|+.++      +.
T Consensus        11 ~~~~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~   88 (494)
T PHA02989         11 SDTVDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIK   88 (494)
T ss_pred             CCcCcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHH
Confidence            3468899999999999999998 6788998776554  47899999999999999776 5689999998765      57


Q ss_pred             HHHHHHHHcCCCCccccCCCCcHHHHHHHc---CCHHHHHHHHHcCCCc-cCCCCCCccHHHHHHhC--CcHHHHHHHHh
Q psy3308         142 AMVELLISKGANIEAKTRDGLTPLHCAARS---GHDNVIDILIEKGAAL-YSKTKNGLAPLHMASQG--DHEAATRVLIY  215 (838)
Q Consensus       142 ~iv~~L~~~~~~~~~~~~~~~tal~~A~~~---g~~~iv~~L~~~~~~~-~~~~~~~~~~l~~A~~~--g~~~~v~~L~~  215 (838)
                      ++|++|+++|++++.++..|.|||+.|+.+   |+.++|++|+++|+++ +..+..|.|||++|+..  ++.+++++|++
T Consensus        89 ~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~  168 (494)
T PHA02989         89 KIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLS  168 (494)
T ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHH
Confidence            899999999999999999999999988766   6799999999999999 78889999999998754  68999999999


Q ss_pred             CCCCCCc-ccCCCccHHHHHHhc----CCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhC
Q psy3308         216 HGAGVDE-ITVDYLTALHVASHC----GHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDR  290 (838)
Q Consensus       216 ~~~~~~~-~~~~~~~~l~~A~~~----g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~  290 (838)
                      +|++++. .+..+.|||+.|+..    ++.+++++|+++|++++..+..+.++++.++..+...  .....+++++|+. 
T Consensus       169 ~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~--~~~~~~il~~l~~-  245 (494)
T PHA02989        169 FGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKIL--SKKEFKVLNFILK-  245 (494)
T ss_pred             cCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhh--cccchHHHHHHHh-
Confidence            9999887 567889999998775    4899999999999999999888899998877654311  1234667776655 


Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy3308         291 KADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGA  358 (838)
Q Consensus       291 ~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~  358 (838)
                      |++++.++..|.||||.|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++.++
T Consensus       246 ~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p  313 (494)
T PHA02989        246 YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKP  313 (494)
T ss_pred             CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence            58888888888888888888888888888888888888888888888888888888888888887643

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.2e-37  Score=298.58  Aligned_cols=217  Identities=18%  Similarity=0.206  Sum_probs=202.0

Q ss_pred             cCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCC
Q psy3308         585 YGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN  664 (838)
Q Consensus       585 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~  664 (838)
                      .++.+++++|+++|++  .+|..|.||||+|+..|+.+++++|+++|++++..+  +.||||.|+..|+.+++++|+++|
T Consensus         9 ~~~~~~~~~Lis~~a~--~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~G   84 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF--KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSG   84 (284)
T ss_pred             cCHHHHHHHHHhCCCC--CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCC
Confidence            4678999999999885  578899999999999999999999999999988764  689999999999999999999999


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCC-cHhHHHHhcCCHHHHHHHHhCCCCCCCCC-CCCCc
Q psy3308         665 AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGL-TPLHLCAQEDKVNVATITMFNGAEIDPVT-KAGFT  742 (838)
Q Consensus       665 ~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~-t~l~~A~~~g~~~i~~~L~~~~~~~~~~~-~~g~t  742 (838)
                      ++++.++..|+||||+|+..|+.+++++|+++|++++.++..|+ ||||+|+..|+.+++++|++++...  .+ ..|+|
T Consensus        85 advn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~T  162 (284)
T PHA02791         85 MDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLS  162 (284)
T ss_pred             CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCcc
Confidence            99999999999999999999999999999999999999888884 8999999999999999999987543  33 25899


Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcH-HHHHHHhCcHHHHHHHHhCCCCCCCCCCccc
Q psy3308         743 PLHIASHFGQLNMVRYLVENGANVNATTNLGYTP-LHQASQQGRVLIIDLLLGAGAQPNATTNLFC  807 (838)
Q Consensus       743 ~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~-l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~  807 (838)
                      |||+|+..|+.+++++|+++|+++|.+|..|.|| ||+|+++|+.++|++|+++|++++.+|..+.
T Consensus       163 pLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~~  228 (284)
T PHA02791        163 CIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLENV  228 (284)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccCc
Confidence            9999999999999999999999999999999987 9999999999999999999999999999664

>KOG4412|consensus

Probab=100.00  E-value=7.8e-38  Score=257.96  Aligned_cols=205  Identities=32%  Similarity=0.480  Sum_probs=146.2

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCC-CCCCCCC-CCCcHHHHHHHcCCHHHHHHHHh-CCCCCCccCCCCChHHHHHHHcCc
Q psy3308         577 TPLHLAAKYGRMKIAQMLLQKDA-PVDSQGK-NGVTPLHVASHYDHQNVALLLLD-RGASPHAVAKNGYTPLHIAAKKNQ  653 (838)
Q Consensus       577 ~~l~~a~~~~~~~~v~~Ll~~~~-~~~~~~~-~~~~~l~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~t~L~~A~~~~~  653 (838)
                      ++.+.+++..-..-++-+++... .++.++. +|+||||+||..|+.+|++||++ .+..++..|..|+||||+|+..|+
T Consensus         5 ~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~   84 (226)
T KOG4412|consen    5 SLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGN   84 (226)
T ss_pred             chHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCc
Confidence            34445555554455555555544 4554443 77777777777777777777773 466677777777777777777777


Q ss_pred             HHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCC
Q psy3308         654 MDIATTLLEY-NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAE  732 (838)
Q Consensus       654 ~~iv~~Ll~~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~  732 (838)
                      .++|+.|+.+ |+++|..+..|.|+||+|+..|..+|+++|+++|+.++.+|..|.||||.||..|.++++++|+..|+.
T Consensus        85 ~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~  164 (226)
T KOG4412|consen   85 DEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAP  164 (226)
T ss_pred             HHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCC
Confidence            7777777776 777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHH
Q psy3308         733 IDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQ  782 (838)
Q Consensus       733 ~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~  782 (838)
                      +|.+|..|+||||.|...||.+...+|+++|++++..|++| ||+..|+-
T Consensus       165 ~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  165 LNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIACN  213 (226)
T ss_pred             CCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHHH
Confidence            77777777777777776777777777777777777777777 77666553

>KOG4412|consensus

Probab=100.00  E-value=9.2e-38  Score=257.54  Aligned_cols=204  Identities=31%  Similarity=0.464  Sum_probs=187.8

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCC-CCCccCC-CCChHHHHHHHcCcHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcC
Q psy3308         609 VTPLHVASHYDHQNVALLLLDRGA-SPHAVAK-NGYTPLHIAAKKNQMDIATTLL-EYNAKPNAESKAGFTPLHLSAQEG  685 (838)
Q Consensus       609 ~~~l~~A~~~~~~~~v~~Ll~~g~-~~~~~~~-~~~t~L~~A~~~~~~~iv~~Ll-~~~~~~~~~~~~g~t~L~~A~~~g  685 (838)
                      .++.+.++......-++.+++... ..+.++. +|+||||+|+..|+.+||.+|+ +.++.++.+|..||||||.|+..|
T Consensus         4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g   83 (226)
T KOG4412|consen    4 ASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNG   83 (226)
T ss_pred             cchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcC
Confidence            456677777766666777777644 6666665 8999999999999999999999 568889999999999999999999


Q ss_pred             cHHHHHHHHhC-CCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q psy3308         686 HTDMSSLLIEH-GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA  764 (838)
Q Consensus       686 ~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~  764 (838)
                      +.++|+-|+.+ |+++|..++.|+|+||+|+.+|+++|+.+|+++|+.++.+|..|.||||.|+.-|+++++++|+..|+
T Consensus        84 ~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a  163 (226)
T KOG4412|consen   84 NDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGA  163 (226)
T ss_pred             cHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCC
Confidence            99999999999 99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHH
Q psy3308         765 NVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILV  813 (838)
Q Consensus       765 ~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~  813 (838)
                      .+|..|+.|+||||.|...|++++..+|+++||+.+..|+.| | +.++.
T Consensus       164 ~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~  212 (226)
T KOG4412|consen  164 PLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIAC  212 (226)
T ss_pred             CCCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHH
Confidence            999999999999999999999999999999999999999999 7 66554

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.7e-35  Score=306.74  Aligned_cols=217  Identities=20%  Similarity=0.138  Sum_probs=149.0

Q ss_pred             HHHHHHcCCHHH--HHHHHHcCCCCccccCCCCcHHHHHHHcCCHH-HHHHHHHcCCCccCCCCCCccHHHH-HHhCCcH
Q psy3308         132 LHVACKWGKVAM--VELLISKGANIEAKTRDGLTPLHCAARSGHDN-VIDILIEKGAALYSKTKNGLAPLHM-ASQGDHE  207 (838)
Q Consensus       132 l~~Aa~~g~~~i--v~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~-iv~~L~~~~~~~~~~~~~~~~~l~~-A~~~g~~  207 (838)
                      |.-.|+.=+++.  .+.|++.|+++-. ..++.|||+.-..+.|.- =++.++..+...+....++.+++++ |+.+|++
T Consensus         7 ~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~l   85 (631)
T PHA02792          7 LYDSCKTFNIDACSAQSLIESGANPLY-EYDGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNIDI   85 (631)
T ss_pred             HHhHhhccchhHHHHHHHHHcCCCccc-ccCCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcccH
Confidence            333444443433  3567788877765 466778887776555522 2333333344444556667777766 5667888


Q ss_pred             HHHHHHHhCCCCCCcccCCCccHHHHHHh-cCCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHH
Q psy3308         208 AATRVLIYHGAGVDEITVDYLTALHVASH-CGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKT  286 (838)
Q Consensus       208 ~~v~~L~~~~~~~~~~~~~~~~~l~~A~~-~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~  286 (838)
                      |+|++|+.+|++++..+..+.+++++|+. .|+.|++++|+++|+++...+..|.+|++.-+....+--       .-..
T Consensus        86 Elvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~-------~~~~  158 (631)
T PHA02792         86 ELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYN-------WDDE  158 (631)
T ss_pred             HHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccc-------hhhh
Confidence            88888888888888777777788888855 688888888888888887777888888876665432210       0000


Q ss_pred             HH--hCCCCCCCCCCCCCcHHHHHHHcC-------CHHHHHHHHhCCCCccccCCCCCcHHHHHHHcC--CHHHHHHHHH
Q psy3308         287 LL--DRKADPNARALNGFTPLHIACKKN-------RYKVVELLLKYGASIAATTESGLTPLHVASFMG--CMNIAIFLLQ  355 (838)
Q Consensus       287 Ll--~~~~~~~~~~~~~~~~l~~A~~~g-------~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g--~~~iv~~Ll~  355 (838)
                      +-  +.+-..+..+..|.||||.|+.++       +.|+++.|+.+|++++..+..|.||||+|+.+.  +.|+++.|++
T Consensus       159 ~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~  238 (631)
T PHA02792        159 LDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFD  238 (631)
T ss_pred             ccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHh
Confidence            00  123344566777888888888888       788888888888888888888888888888888  7888888876


Q ss_pred             c
Q psy3308         356 A  356 (838)
Q Consensus       356 ~  356 (838)
                      .
T Consensus       239 ~  239 (631)
T PHA02792        239 S  239 (631)
T ss_pred             c
Confidence            3

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4.2e-36  Score=319.23  Aligned_cols=240  Identities=25%  Similarity=0.359  Sum_probs=225.9

Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHH
Q psy3308         576 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMD  655 (838)
Q Consensus       576 ~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~  655 (838)
                      +++|+.|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++..+..+.||||.|+..|+.+
T Consensus         3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~   82 (413)
T PHA02875          3 QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVK   82 (413)
T ss_pred             chHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHH
Confidence            58999999999999999999999999999999999999999999999999999999999988889999999999999999


Q ss_pred             HHHHHHhCCCCCC-CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCC
Q psy3308         656 IATTLLEYNAKPN-AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID  734 (838)
Q Consensus       656 iv~~Ll~~~~~~~-~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~  734 (838)
                      ++++|++.|...+ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus        83 ~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~  162 (413)
T PHA02875         83 AVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLD  162 (413)
T ss_pred             HHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence            9999999987654 446679999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCC-CcHHHHHHHhCcHHHHHHHHhCCCCCCCC---CCccch-H
Q psy3308         735 PVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLG-YTPLHQASQQGRVLIIDLLLGAGAQPNAT---TNLFCC-A  809 (838)
Q Consensus       735 ~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g-~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~---~~~~~~-~  809 (838)
                      .+|..|+||||+|+..|+.+++++|+++|++++..+..| .||+++|+..|+.++|++|+++|+|++..   +..+.| +
T Consensus       163 ~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l  242 (413)
T PHA02875        163 IEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTIL  242 (413)
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHH
Confidence            999999999999999999999999999999999999877 58999999999999999999999999986   566777 7


Q ss_pred             HHHHHc
Q psy3308         810 TILVKN  815 (838)
Q Consensus       810 ~~~~~~  815 (838)
                      +++...
T Consensus       243 ~~~~~~  248 (413)
T PHA02875        243 DMICNM  248 (413)
T ss_pred             HHHHhh
Confidence            766543

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.8e-35  Score=319.11  Aligned_cols=284  Identities=20%  Similarity=0.328  Sum_probs=229.5

Q ss_pred             CHHHHHHHHhCCCCCCCCCCCCChHHHHHH--HhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy3308         471 NGDIASLLLQHGASVDAPTKDGYTALHISA--KEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD  548 (838)
Q Consensus       471 ~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~--~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~  548 (838)
                      ..+.|+.|++.+ +++.. ..+.++++.+.  ..++.+++++|+++|++++..+..|.|||+.++..             
T Consensus        17 ~~~~v~~ll~~~-~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n-------------   81 (489)
T PHA02798         17 KLSTVKLLIKSC-NPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSN-------------   81 (489)
T ss_pred             cHHHHHHHHhcC-Chhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHh-------------
Confidence            445666666543 22222 23444444332  23356666666666666666666666666654431             


Q ss_pred             CCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC---CHHHHH
Q psy3308         549 APVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYD---HQNVAL  625 (838)
Q Consensus       549 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~---~~~~v~  625 (838)
                                                      .+...++.+++++|+++|+++|.++..|.||||+|+..+   +.++++
T Consensus        82 --------------------------------~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~  129 (489)
T PHA02798         82 --------------------------------IKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILL  129 (489)
T ss_pred             --------------------------------HHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHH
Confidence                                            001124589999999999999999999999999999875   789999


Q ss_pred             HHHhCCCCCCccCCCCChHHHHHHHcCc---HHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHc----CcHHHHHHHHhCC
Q psy3308         626 LLLDRGASPHAVAKNGYTPLHIAAKKNQ---MDIATTLLEYNAKPNAES-KAGFTPLHLSAQE----GHTDMSSLLIEHG  697 (838)
Q Consensus       626 ~Ll~~g~~~~~~~~~~~t~L~~A~~~~~---~~iv~~Ll~~~~~~~~~~-~~g~t~L~~A~~~----g~~~iv~~Ll~~g  697 (838)
                      +|+++|++++..+..|.||||.|++.++   .+++++|++.|++++..+ ..|.||||.++..    ++.+++++|+++|
T Consensus       130 ~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~G  209 (489)
T PHA02798        130 FMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNG  209 (489)
T ss_pred             HHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCC
Confidence            9999999999999999999999999987   999999999999998875 4688999988764    4799999999999


Q ss_pred             CCCCCCCCCCCcHhH-------HHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCC
Q psy3308         698 ATVSHQAKNGLTPLH-------LCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATT  770 (838)
Q Consensus       698 ~~~~~~~~~~~t~l~-------~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~  770 (838)
                      ++++..+..+.++++       .+...++.+++++|+. ++++|.+|..|+||||+|+..|+.+++++|+++|+++|..|
T Consensus       210 a~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d  288 (489)
T PHA02798        210 FIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIIT  288 (489)
T ss_pred             CCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccC
Confidence            999998888888876       2445667788888765 69999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCC
Q psy3308         771 NLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT  802 (838)
Q Consensus       771 ~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~  802 (838)
                      ..|+|||++|+++++.++++.|+++|++++..
T Consensus       289 ~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~i  320 (489)
T PHA02798        289 ELGNTCLFTAFENESKFIFNSILNKKPNKNTI  320 (489)
T ss_pred             CCCCcHHHHHHHcCcHHHHHHHHccCCCHHHH
Confidence            99999999999999999999999999998754

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=1e-34  Score=313.31  Aligned_cols=288  Identities=22%  Similarity=0.250  Sum_probs=234.5

Q ss_pred             cCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHH--cCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHc-----CCHHHH
Q psy3308          72 TGQEEVAKILVDNGATINVQSLNGFTPLYMAAQ--ENHDGVVRYLLSKGGNQTLATEHNITPLHVACKW-----GKVAMV  144 (838)
Q Consensus        72 ~g~~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~--~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~-----g~~~iv  144 (838)
                      +-..+.|+.|++.+ +++.. ..+.|+++.+..  .++.++|++|+++|++++..+..|.|||+.|+.+     ++.++|
T Consensus        15 ~~~~~~v~~ll~~~-~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv   92 (489)
T PHA02798         15 NVKLSTVKLLIKSC-NPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIV   92 (489)
T ss_pred             cccHHHHHHHHhcC-Chhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHH
Confidence            44677889998765 33433 345666664443  4578999999999999998999999999988865     678999


Q ss_pred             HHHHHcCCCCccccCCCCcHHHHHHHcC---CHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCc---HHHHHHHHhCCC
Q psy3308         145 ELLISKGANIEAKTRDGLTPLHCAARSG---HDNVIDILIEKGAALYSKTKNGLAPLHMASQGDH---EAATRVLIYHGA  218 (838)
Q Consensus       145 ~~L~~~~~~~~~~~~~~~tal~~A~~~g---~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~---~~~v~~L~~~~~  218 (838)
                      ++|+++|++++..+..|.||||+|+.+|   +.+++++|+++|++++..+..|.|||++|++.|+   .+++++|+++|+
T Consensus        93 ~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~ga  172 (489)
T PHA02798         93 KILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGV  172 (489)
T ss_pred             HHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCC
Confidence            9999999999999999999999999876   6889999999999999889999999999999887   899999999998


Q ss_pred             CCCccc-CCCccHHHHHHhc----CCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCC
Q psy3308         219 GVDEIT-VDYLTALHVASHC----GHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKAD  293 (838)
Q Consensus       219 ~~~~~~-~~~~~~l~~A~~~----g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~  293 (838)
                      +++..+ ..+.||||.++..    ++.+++++|+++|++++..+..+.++++.....-.. .......+++++|+. +++
T Consensus       173 din~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~-~~~~~~~~i~~~l~~-~~d  250 (489)
T PHA02798        173 DINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLY-DNKRFKKNILDFIFS-YID  250 (489)
T ss_pred             CcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHh-hcccchHHHHHHHHh-cCC
Confidence            887664 4577899988664    589999999999999998888888876621110000 001125667877765 589


Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy3308         294 PNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTA  363 (838)
Q Consensus       294 ~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~  363 (838)
                      ++.++..|.||||.|+..|+.+++++|+++|++++..+..|.|||+.|+.+|+.++++.|++.+++++..
T Consensus       251 vN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~i  320 (489)
T PHA02798        251 INQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKNTI  320 (489)
T ss_pred             CCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999988877643

>KOG4369|consensus

Probab=100.00  E-value=1.3e-35  Score=308.29  Aligned_cols=322  Identities=27%  Similarity=0.348  Sum_probs=295.1

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcc-cCCCCCcHHHHHHHc
Q psy3308         457 REDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITA-TTKKGFTPLHLAAKY  535 (838)
Q Consensus       457 ~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~-~~~~~~~~l~~A~~~  535 (838)
                      ..-.++|..||..|+.|+++.|+.+|+++.-.|..|.++|..|+..|+..+|+.|+..-++++. .|..+.|+|.+||..
T Consensus       755 ~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsg  834 (2131)
T KOG4369|consen  755 PNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSG  834 (2131)
T ss_pred             ccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCC
Confidence            3456889999999999999999999999999999999999999999999999999998888775 456678999999999


Q ss_pred             CCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC--CCCCcHHH
Q psy3308         536 GRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG--KNGVTPLH  613 (838)
Q Consensus       536 g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~--~~~~~~l~  613 (838)
                      |+.++++.|+..+.....                 ++....|||.+|...|..++|+.|+..|..||.+.  +.|..||+
T Consensus       835 gr~~vvelLl~~gankeh-----------------rnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLm  897 (2131)
T KOG4369|consen  835 GRTRVVELLLNAGANKEH-----------------RNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLM  897 (2131)
T ss_pred             CcchHHHHHHHhhccccc-----------------cchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhh
Confidence            999999999998765433                 34455799999999999999999999999999875  57889999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCCCccC-CCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHH
Q psy3308         614 VASHYDHQNVALLLLDRGASPHAVA-KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSL  692 (838)
Q Consensus       614 ~A~~~~~~~~v~~Ll~~g~~~~~~~-~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~  692 (838)
                      +|..+|+...++.|++.|.++|..- .+.+|+|-.|+-.|+.++|..||.+.+++..+-..|-|||+.++..|..|+=.+
T Consensus       898 latmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~  977 (2131)
T KOG4369|consen  898 LATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNL  977 (2131)
T ss_pred             hhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchh
Confidence            9999999999999999999998643 456799999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCC--CCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCC
Q psy3308         693 LIEHGATVSHQA--KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATT  770 (838)
Q Consensus       693 Ll~~g~~~~~~~--~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~  770 (838)
                      |+..|+|+|..-  ....|+|..++..||...++.|+...+.++.++..|.|+|..|+..|++..+..|+++++|++..|
T Consensus       978 li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qd 1057 (2131)
T KOG4369|consen  978 LIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQD 1057 (2131)
T ss_pred             hhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhh
Confidence            999999998653  456789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         771 NLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       771 ~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      +...++++.|.|.||++||++.+..
T Consensus      1058 nr~~S~~maafRKgh~~iVk~mv~~ 1082 (2131)
T KOG4369|consen 1058 NRTNSRTMAAFRKGHFAIVKKMVPP 1082 (2131)
T ss_pred             cccccccHHHHHhchhheeccccCc
Confidence            9999999999999999999998865

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=5.3e-34  Score=303.11  Aligned_cols=251  Identities=27%  Similarity=0.364  Sum_probs=228.9

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC
Q psy3308         526 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG  605 (838)
Q Consensus       526 ~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~  605 (838)
                      +++|+.|+..|+.+++++|++.+.+                 ++..+..|.||||.|+..++.+++++|+++|++++..+
T Consensus         3 ~~~L~~A~~~g~~~iv~~Ll~~g~~-----------------~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~   65 (413)
T PHA02875          3 QVALCDAILFGELDIARRLLDIGIN-----------------PNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKY   65 (413)
T ss_pred             chHHHHHHHhCCHHHHHHHHHCCCC-----------------CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccC
Confidence            5789999999999999999987654                 45566789999999999999999999999999999888


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCCC-ccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy3308         606 KNGVTPLHVASHYDHQNVALLLLDRGASPH-AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQE  684 (838)
Q Consensus       606 ~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~  684 (838)
                      ..+.+|||.|+..|+.+++++|++.|...+ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus        66 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~  145 (413)
T PHA02875         66 PDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMM  145 (413)
T ss_pred             CCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Confidence            899999999999999999999999998764 3456799999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCC-cHHHHHHHcCCHHHHHHHHHCC
Q psy3308         685 GHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGF-TPLHIASHFGQLNMVRYLVENG  763 (838)
Q Consensus       685 g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~-t~l~~A~~~g~~~~v~~Ll~~g  763 (838)
                      |+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|. ||+++|+..|+.+++++|+++|
T Consensus       146 ~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~g  225 (413)
T PHA02875        146 GDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRG  225 (413)
T ss_pred             CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCC
Confidence            999999999999999999999999999999999999999999999999999988875 7899999999999999999999


Q ss_pred             CCCccC---CCCCCcHHHHHHHh---CcHHHHHHHH
Q psy3308         764 ANVNAT---TNLGYTPLHQASQQ---GRVLIIDLLL  793 (838)
Q Consensus       764 ~~~~~~---~~~g~t~l~~A~~~---~~~~~v~~Ll  793 (838)
                      +++|..   +..+.||++.++..   ...+.++.++
T Consensus       226 ad~n~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~li  261 (413)
T PHA02875        226 ADCNIMFMIEGEECTILDMICNMCTNLESEAIDALI  261 (413)
T ss_pred             cCcchHhhcCCCchHHHHHHHhhcCCcccHHHHHHH
Confidence            999875   56789999988743   3455565555

>KOG4369|consensus

Probab=100.00  E-value=2.3e-34  Score=299.14  Aligned_cols=319  Identities=28%  Similarity=0.355  Sum_probs=291.0

Q ss_pred             CChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCcccc
Q psy3308         492 GYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITAT  571 (838)
Q Consensus       492 ~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~  571 (838)
                      -.|+|..||..|+.|++++|+..|+++..+|+.|.+|+.+|+..|+..+|+.|++...+++.+                .
T Consensus       757 ~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQ----------------s  820 (2131)
T KOG4369|consen  757 IKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQ----------------S  820 (2131)
T ss_pred             ccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhh----------------c
Confidence            457999999999999999999999999999999999999999999999999999987766543                5


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCC--CCChHHHHHH
Q psy3308         572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAK--NGYTPLHIAA  649 (838)
Q Consensus       572 ~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~--~~~t~L~~A~  649 (838)
                      |+.+.|+|..|+..|+.++|+.|+..|++-..++...+|||.+|...|..+++..|+..|.++|.+..  .|-.||+.|.
T Consensus       821 drtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlat  900 (2131)
T KOG4369|consen  821 DRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLAT  900 (2131)
T ss_pred             ccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhh
Confidence            66778999999999999999999999999888888889999999999999999999999988887654  5889999999


Q ss_pred             HcCcHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHh
Q psy3308         650 KKNQMDIATTLLEYNAKPNAE-SKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMF  728 (838)
Q Consensus       650 ~~~~~~iv~~Ll~~~~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~  728 (838)
                      ..|+.+.++.|++.|.|+|.. .....|+|-.|...|+.++|.+|+...+++..+-+.|.|||+.+|..|.+++=.+|+.
T Consensus       901 mngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~  980 (2131)
T KOG4369|consen  901 MNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIA  980 (2131)
T ss_pred             hccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhh
Confidence            999999999999999888754 2345699999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCC--CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCcc
Q psy3308         729 NGAEIDPV--TKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLF  806 (838)
Q Consensus       729 ~~~~~~~~--~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~  806 (838)
                      .|+|.|..  .....|+|..++..||...|..|++..+.+..+++.|.|+|.+|+..|++..+.+|+++++|++..|+.-
T Consensus       981 ~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~ 1060 (2131)
T KOG4369|consen  981 AGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRT 1060 (2131)
T ss_pred             cccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhhccc
Confidence            99998753  3334589999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             ch-HHHHHHcCCccCccccccc
Q psy3308         807 CC-ATILVKNGAEIDPVTKLSD  827 (838)
Q Consensus       807 ~~-~~~~~~~~~~~~~~~~~~~  827 (838)
                      .+ ++-|.++|+ +.+|+++..
T Consensus      1061 ~S~~maafRKgh-~~iVk~mv~ 1081 (2131)
T KOG4369|consen 1061 NSRTMAAFRKGH-FAIVKKMVP 1081 (2131)
T ss_pred             ccccHHHHHhch-hheeccccC
Confidence            88 666666666 799988754

>KOG0509|consensus

Probab=100.00  E-value=2.4e-32  Score=273.29  Aligned_cols=207  Identities=33%  Similarity=0.498  Sum_probs=119.3

Q ss_pred             cHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccC-CCCChHHHHHHHcCcH
Q psy3308         577 TPLHLAAKYGRMKIAQMLLQK-DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVA-KNGYTPLHIAAKKNQM  654 (838)
Q Consensus       577 ~~l~~a~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~~~t~L~~A~~~~~~  654 (838)
                      ..+..|++.|.++-|+.|++. |.+++..|.+|.++||+|+.+++.+++++|+++|+++|... .-+.||||+|+++|++
T Consensus        46 ~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~  125 (600)
T KOG0509|consen   46 DDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHI  125 (600)
T ss_pred             hhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcH
Confidence            345555555666666666555 55555555555666666666666666666666666655555 2345555555555555


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCC
Q psy3308         655 DIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID  734 (838)
Q Consensus       655 ~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~  734 (838)
                      .+|++|+++|++++.+|..|.+|||.|++.|+.-+|-+|+.+|++++.+|.+|+||||+|+.+|+...++.|+.-++.++
T Consensus       126 ~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~  205 (600)
T KOG0509|consen  126 SVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLL  205 (600)
T ss_pred             HHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccc
Confidence            55555555555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             CCC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHh
Q psy3308         735 PVT-KAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQ  783 (838)
Q Consensus       735 ~~~-~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~  783 (838)
                      ..| .+|.||||+|+..|+..++++|++.|++.+..|.+|.||+.+|.+.
T Consensus       206 ~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  206 LTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             ccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            554 5555555555555555555544444555555555555555555544

>KOG0509|consensus

Probab=99.98  E-value=1.3e-31  Score=268.09  Aligned_cols=207  Identities=34%  Similarity=0.443  Sum_probs=198.7

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCc
Q psy3308         609 VTPLHVASHYDHQNVALLLLDR-GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAES-KAGFTPLHLSAQEGH  686 (838)
Q Consensus       609 ~~~l~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~-~~g~t~L~~A~~~g~  686 (838)
                      ..-+..|++.|..+.++.|++. |.+++..|.+|.|+||+|+.+++++++++|+++|+++|... .-+.||||+|+++|+
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~  124 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGH  124 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCc
Confidence            3467789999999999999999 99999999999999999999999999999999999999998 567899999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy3308         687 TDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV  766 (838)
Q Consensus       687 ~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~  766 (838)
                      ..+|++|+++||+++.+|..|.++||.|++.|+.-++-+|+.+++++|.+|..|+||||+|+..|+...+..|+.-|+.+
T Consensus       125 ~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~  204 (600)
T KOG0509|consen  125 ISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASL  204 (600)
T ss_pred             HHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999988899999999999


Q ss_pred             ccCC-CCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHHc
Q psy3308         767 NATT-NLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVKN  815 (838)
Q Consensus       767 ~~~~-~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~~  815 (838)
                      +..| .+|.||||+|+..|+..++.+|++.|++.+.+|.+|+| +++|.+.
T Consensus       205 ~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  205 LLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             cccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            9998 78999999999999999999888889999999999999 9999877

>PHA02795 ankyrin-like protein; Provisional

Probab=99.97  E-value=1.7e-30  Score=260.00  Aligned_cols=207  Identities=16%  Similarity=0.180  Sum_probs=129.6

Q ss_pred             HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC------ccCCCCChHHHHHHH--cCcHHHHHHHH
Q psy3308         590 IAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPH------AVAKNGYTPLHIAAK--KNQMDIATTLL  661 (838)
Q Consensus       590 ~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~------~~~~~~~t~L~~A~~--~~~~~iv~~Ll  661 (838)
                      +.+|++.+|.++|....++     +|+..+..+++++|+++|++++      ..+..++|+||.++.  .|+.++|++|+
T Consensus        64 ~~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI  138 (437)
T PHA02795         64 LYDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMV  138 (437)
T ss_pred             HHHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHH
Confidence            3456666666666555444     5666666666666666666655      444556666666666  56666666666


Q ss_pred             hCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC------CCCCcHhHHHHhcCCHHHHHHHHhCCCCCCC
Q psy3308         662 EYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA------KNGLTPLHLCAQEDKVNVATITMFNGAEIDP  735 (838)
Q Consensus       662 ~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~------~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~  735 (838)
                      ++|++++..+  +.||+|.|+..++.+++++|+++|++.....      ..+.+++|.|+..++.+++++|+++|+++|.
T Consensus       139 ~~GADIn~~~--~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~  216 (437)
T PHA02795        139 DHGAVIYKIE--CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQ  216 (437)
T ss_pred             HCCCCCCCCC--CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCc
Confidence            6666666533  3566666666666666666666665321111      2345566666666666666666666666666


Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhC--------cHHHHHHHHhCCCCCCCCC
Q psy3308         736 VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQG--------RVLIIDLLLGAGAQPNATT  803 (838)
Q Consensus       736 ~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~--------~~~~v~~Ll~~ga~~~~~~  803 (838)
                      +|..|+||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|        +.+++++|+++|++++...
T Consensus       217 kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~  292 (437)
T PHA02795        217 LDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIK  292 (437)
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchh
Confidence            6666666666666666666666666666666666666666666666665        3466666666666666544

>PHA02795 ankyrin-like protein; Provisional

Probab=99.96  E-value=6.2e-29  Score=248.86  Aligned_cols=234  Identities=15%  Similarity=0.135  Sum_probs=199.8

Q ss_pred             hHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCC------CCCCCCCcHHHHHHH--cCCHHHHHHH
Q psy3308         556 KVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD------SQGKNGVTPLHVASH--YDHQNVALLL  627 (838)
Q Consensus       556 ~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~------~~~~~~~~~l~~A~~--~~~~~~v~~L  627 (838)
                      .+.+++..+|.+++....++     .|+..+..+++++|+.+|++++      ..+..++|+||.++.  .|+.+++++|
T Consensus        63 ~~~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~L  137 (437)
T PHA02795         63 VLYDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFM  137 (437)
T ss_pred             HHHHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHH
Confidence            34455556666677666555     8999999999999999999988      677889999999999  8999999999


Q ss_pred             HhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCC------CCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy3308         628 LDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAES------KAGFTPLHLSAQEGHTDMSSLLIEHGATVS  701 (838)
Q Consensus       628 l~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~------~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~  701 (838)
                      +++|++++..  .+.||+|.|+..++.+++++|+++|++.....      ..+.++++.|...++.+++++|+++|+++|
T Consensus       138 I~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN  215 (437)
T PHA02795        138 VDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDIN  215 (437)
T ss_pred             HHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcC
Confidence            9999999974  45799999999999999999999998532221      346789999999999999999999999999


Q ss_pred             CCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC--------CHHHHHHHHHCCCCCccCCCCC
Q psy3308         702 HQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG--------QLNMVRYLVENGANVNATTNLG  773 (838)
Q Consensus       702 ~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g--------~~~~v~~Ll~~g~~~~~~~~~g  773 (838)
                      .++..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|        +.+++++|+++|++++....  
T Consensus       216 ~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~~--  293 (437)
T PHA02795        216 QLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIKL--  293 (437)
T ss_pred             cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchhH--
Confidence            99999999999999999999999999999999999999999999999998        47999999999999987543  


Q ss_pred             CcHHHHHHHhCcHHHHHHHHhCCCCCCC
Q psy3308         774 YTPLHQASQQGRVLIIDLLLGAGAQPNA  801 (838)
Q Consensus       774 ~t~l~~A~~~~~~~~v~~Ll~~ga~~~~  801 (838)
                       |.+..  ...+.++++.|++++...+.
T Consensus       294 -~~~~~--~~~n~~~ik~lI~y~~~ldy  318 (437)
T PHA02795        294 -AILNN--TIENHDVIKLCIKYFMMVDY  318 (437)
T ss_pred             -Hhhhc--ccchHHHHHHHHHHHHhccc
Confidence             22211  11267899999988775443

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.96  E-value=2.6e-28  Score=229.13  Aligned_cols=174  Identities=18%  Similarity=0.225  Sum_probs=130.6

Q ss_pred             CCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHhCCCCCCCCC-CCCCcHhHHHHh
Q psy3308         640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEG--HTDMSSLLIEHGATVSHQA-KNGLTPLHLCAQ  716 (838)
Q Consensus       640 ~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g--~~~iv~~Ll~~g~~~~~~~-~~~~t~l~~A~~  716 (838)
                      .+++||+.|+..|+.++|+.|++.   ++..+..|.||||+|+..+  +.+++++|+++|++++.++ ..|.||||+|+.
T Consensus        20 ~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~   96 (209)
T PHA02859         20 RYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLS   96 (209)
T ss_pred             ccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHH
Confidence            456777778877777777777764   3556667778888777644  6788888888888887775 467788887765


Q ss_pred             c---CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHHCCCCCccCCCCCCcHHHH-HHHhCcHHHHH
Q psy3308         717 E---DKVNVATITMFNGAEIDPVTKAGFTPLHIASH--FGQLNMVRYLVENGANVNATTNLGYTPLHQ-ASQQGRVLIID  790 (838)
Q Consensus       717 ~---g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~--~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~-A~~~~~~~~v~  790 (838)
                      .   ++.+++++|+++|++++.+|..|+||||+|+.  .++.+++++|+++|++++.+|..|.||||. |+..++.++++
T Consensus        97 ~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~  176 (209)
T PHA02859         97 FNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFD  176 (209)
T ss_pred             hCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHH
Confidence            3   46778888888888888888888888887765  357788888888888888888888888874 45567788888


Q ss_pred             HHHhCCCCCCCCCCccch-HHHHHHcC
Q psy3308         791 LLLGAGAQPNATTNLFCC-ATILVKNG  816 (838)
Q Consensus       791 ~Ll~~ga~~~~~~~~~~~-~~~~~~~~  816 (838)
                      +|+++|++++.+|..|.| +++|..++
T Consensus       177 ~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        177 FLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            888888888888888888 87777654

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.96  E-value=8.1e-28  Score=225.73  Aligned_cols=175  Identities=17%  Similarity=0.212  Sum_probs=147.3

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcC--cHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHH
Q psy3308         607 NGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKN--QMDIATTLLEYNAKPNAES-KAGFTPLHLSAQ  683 (838)
Q Consensus       607 ~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~--~~~iv~~Ll~~~~~~~~~~-~~g~t~L~~A~~  683 (838)
                      .+.+||+.|+..++.++|+.|++.   ++..+..|.||||.|+..+  +.+++++|+++|++++.++ ..|+||||+|+.
T Consensus        20 ~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~   96 (209)
T PHA02859         20 RYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLS   96 (209)
T ss_pred             ccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHH
Confidence            346788888888888888888865   4556777888888888754  7889999999998888886 478899998775


Q ss_pred             c---CcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHh--cCCHHHHHHHHhCCCCCCCCCCCCCcHHHH-HHHcCCHHHHH
Q psy3308         684 E---GHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQ--EDKVNVATITMFNGAEIDPVTKAGFTPLHI-ASHFGQLNMVR  757 (838)
Q Consensus       684 ~---g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~--~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~-A~~~g~~~~v~  757 (838)
                      .   ++.+++++|+++|++++.++..|.||||.|+.  .++.+++++|+++|++++.+|..|.||||. |+..++.++++
T Consensus        97 ~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~  176 (209)
T PHA02859         97 FNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFD  176 (209)
T ss_pred             hCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHH
Confidence            3   47899999999999999999999999998875  468899999999999999999999999995 56778999999


Q ss_pred             HHHHCCCCCccCCCCCCcHHHHHHHhC
Q psy3308         758 YLVENGANVNATTNLGYTPLHQASQQG  784 (838)
Q Consensus       758 ~Ll~~g~~~~~~~~~g~t~l~~A~~~~  784 (838)
                      +|+++|++++.+|..|+|||++|..++
T Consensus       177 ~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        177 FLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            999999999999999999999998654

>KOG0502|consensus

Probab=99.95  E-value=1.1e-27  Score=204.75  Aligned_cols=230  Identities=23%  Similarity=0.301  Sum_probs=203.1

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCc
Q psy3308         575 GFTPLHLAAKYGRMKIAQMLLQKDAP-VDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQ  653 (838)
Q Consensus       575 ~~~~l~~a~~~~~~~~v~~Ll~~~~~-~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~  653 (838)
                      |..-+-.+...++.+++..+..-..+ +...+.+|+.+++.++-+++.+.+..++.+|...|..+-.+++|+.+++...+
T Consensus        62 ge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~  141 (296)
T KOG0502|consen   62 GESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLH  141 (296)
T ss_pred             CCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHH
Confidence            34445567777888877777665433 34466779999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCC
Q psy3308         654 MDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEI  733 (838)
Q Consensus       654 ~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~  733 (838)
                      ++.+..+.++.  +|..|..|.|||.+|+..|++.+|++|++.|+++....+...++|++|.+.|..+||+.|+..+.++
T Consensus       142 L~~~~~~~~n~--VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdV  219 (296)
T KOG0502|consen  142 LDVVDLLVNNK--VNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDV  219 (296)
T ss_pred             HHHHHHHhhcc--ccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCc
Confidence            99988888764  5888999999999999999999999999999999999889999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccc
Q psy3308         734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFC  807 (838)
Q Consensus       734 ~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~  807 (838)
                      |..|-+|-|||-+|++.||.+||+.|++.|++++..+..|++++..|++.|+- +|+..+++-++...+|+...
T Consensus       220 NvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~  292 (296)
T KOG0502|consen  220 NVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDSEKR  292 (296)
T ss_pred             ceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCC
Confidence            99999999999999999999999999999999999999999999999999988 88888887776666665443

>KOG0502|consensus

Probab=99.95  E-value=8e-28  Score=205.48  Aligned_cols=236  Identities=27%  Similarity=0.343  Sum_probs=211.7

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy3308         524 KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS  603 (838)
Q Consensus       524 ~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~  603 (838)
                      .|...+..+...++.++........++.                +..++.+|+++++.++-.++.+.+..++.++...|.
T Consensus        61 lge~~~~~~~~s~nsd~~v~s~~~~~~~----------------~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgne  124 (296)
T KOG0502|consen   61 LGESLLTVAVRSGNSDVAVQSAQLDPDA----------------IDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNE  124 (296)
T ss_pred             cCCcccchhhhcCCcHHHHHhhccCCCC----------------CCCCCchhhhhhhhcCCCCCcceeeeeecccccCCc
Confidence            3444455677778888777776554332                334566799999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy3308         604 QGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQ  683 (838)
Q Consensus       604 ~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~  683 (838)
                      .+..+++|+.+++...+.+.+..+.++  .+|..|..|.|||++|+.+|++.+|++|++.|++++....+..++|..|.+
T Consensus       125 vs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~  202 (296)
T KOG0502|consen  125 VSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATR  202 (296)
T ss_pred             cccccCChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhc
Confidence            999999999999999999988888776  567889999999999999999999999999999999999999999999999


Q ss_pred             cCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy3308         684 EGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENG  763 (838)
Q Consensus       684 ~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g  763 (838)
                      .|..+||++|+..+.++|.-|.+|.|||-+|++.+|.+|++.|+..|++++..+..|.+++..|+..|.. +|+..+++-
T Consensus       203 ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h  281 (296)
T KOG0502|consen  203 GGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKH  281 (296)
T ss_pred             CChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999987 999999988


Q ss_pred             CCCccCCCCCCcHHH
Q psy3308         764 ANVNATTNLGYTPLH  778 (838)
Q Consensus       764 ~~~~~~~~~g~t~l~  778 (838)
                      +..+..|+.-+||+|
T Consensus       282 ~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  282 ALKLCQDSEKRTPLH  296 (296)
T ss_pred             HHHHhhcccCCCCCC
Confidence            888888888888764

>KOG0507|consensus

Probab=99.94  E-value=3.4e-26  Score=231.90  Aligned_cols=239  Identities=27%  Similarity=0.332  Sum_probs=214.6

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCC-------------CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCh
Q psy3308         577 TPLHLAAKYGRMKIAQMLLQKD-------------APVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYT  643 (838)
Q Consensus       577 ~~l~~a~~~~~~~~v~~Ll~~~-------------~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t  643 (838)
                      +-+..|++.|+.+.+..|++..             .++|.+|.+|.|+||.|+.+|+.+++++|++..+-+...+..|.+
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~   84 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGIL   84 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcc
Confidence            3466788999999999888741             235667889999999999999999999999999999999989999


Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHH
Q psy3308         644 PLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVA  723 (838)
Q Consensus       644 ~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~  723 (838)
                      |||+|++.|+.++++.|+.++..+|..+..|.||||.|++.||.++|.+|+.+|++...+++.+.|+|..|++-|..+++
T Consensus        85 plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vv  164 (854)
T KOG0507|consen   85 PLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVV  164 (854)
T ss_pred             eEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHH
Confidence            99999999999999999999988999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCCCC--------CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         724 TITMFNGAEI--------DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       724 ~~L~~~~~~~--------~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      +.|+.....+        ...+..+.+|||.|+++||.+|++.|++.|.++|..++.| |+||.|+-.|..++|++|++.
T Consensus       165 q~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~  243 (854)
T KOG0507|consen  165 QMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEI  243 (854)
T ss_pred             HHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhh
Confidence            9988763221        2355677899999999999999999999999999998876 799999999999999999999


Q ss_pred             CCCCCCCCCccch-HHHHHHcC
Q psy3308         796 GAQPNATTNLFCC-ATILVKNG  816 (838)
Q Consensus       796 ga~~~~~~~~~~~-~~~~~~~~  816 (838)
                      |.+..++|.+|+| +++..+..
T Consensus       244 gin~h~~n~~~qtaldil~d~~  265 (854)
T KOG0507|consen  244 GINTHIKNQHGQTALDIIIDLQ  265 (854)
T ss_pred             ccccccccccchHHHHHHHhcc
Confidence            9999999999999 88876644

>KOG0507|consensus

Probab=99.92  E-value=8.7e-25  Score=221.76  Aligned_cols=262  Identities=27%  Similarity=0.363  Sum_probs=219.1

Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCC
Q psy3308         529 LHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNG  608 (838)
Q Consensus       529 l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~  608 (838)
                      +.-|++.|+.+.+..|++......    --.+......+.+..|..|.|+||.|+.+|+.++++.|+++.+-++..+..|
T Consensus         7 l~~a~ka~d~~tva~ll~~~~~r~----~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg   82 (854)
T KOG0507|consen    7 LIDACKAGDYDTVALLLSSKKGRS----GLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKG   82 (854)
T ss_pred             HHHhhhcccHHHHHHhccCCCCCC----CCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccC
Confidence            334555566666666555322100    0000112234567778899999999999999999999999999999899999


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHH
Q psy3308         609 VTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD  688 (838)
Q Consensus       609 ~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~  688 (838)
                      .+|||+|+..|+.++++.|+.++..+|.....|.||||.|++.|+.+++.+|+.+|+++-+++..+.|+|..|++-|..+
T Consensus        83 ~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~  162 (854)
T KOG0507|consen   83 ILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAE  162 (854)
T ss_pred             cceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCC--------CCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy3308         689 MSSLLIEHGATV--------SHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLV  760 (838)
Q Consensus       689 iv~~Ll~~g~~~--------~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll  760 (838)
                      +|+.|++...++        ..++-.+.+|||.|+.+||.++++.|+..|.++|.....| |+||.|+.+|..++|.+|+
T Consensus       163 Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll  241 (854)
T KOG0507|consen  163 VVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLL  241 (854)
T ss_pred             HHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHH
Confidence            999999873222        1234467789999999999999999999999999887776 8999999999999999999


Q ss_pred             HCCCCCccCCCCCCcHHHHHHHhC---cHHHHHHHHhC
Q psy3308         761 ENGANVNATTNLGYTPLHQASQQG---RVLIIDLLLGA  795 (838)
Q Consensus       761 ~~g~~~~~~~~~g~t~l~~A~~~~---~~~~v~~Ll~~  795 (838)
                      +.|.+...++..|+|+|..-....   ..+++-++...
T Consensus       242 ~~gin~h~~n~~~qtaldil~d~~~~~~~ei~ga~~~~  279 (854)
T KOG0507|consen  242 EIGINTHIKNQHGQTALDIIIDLQENRRYEIAGAVKNF  279 (854)
T ss_pred             hhccccccccccchHHHHHHHhcchhhhhhhhhhhhcc
Confidence            999999999999999998877543   45565555543

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.92  E-value=7.7e-24  Score=241.63  Aligned_cols=164  Identities=24%  Similarity=0.303  Sum_probs=102.2

Q ss_pred             CChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCH
Q psy3308         641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKV  720 (838)
Q Consensus       641 ~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~  720 (838)
                      +.++|+.|+..|+.++++.|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.++..|.||||.|+..|+.
T Consensus       525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~  604 (823)
T PLN03192        525 MASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHH  604 (823)
T ss_pred             chhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCH
Confidence            44566666666666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCC
Q psy3308         721 NVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN  800 (838)
Q Consensus       721 ~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~  800 (838)
                      +++++|+..+...+.  ..|.++||.|+..|+.+++++|+++|+++|.+|.+|+||||+|++.|+.+++++|+++|||++
T Consensus       605 ~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~  682 (823)
T PLN03192        605 KIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVD  682 (823)
T ss_pred             HHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence            666666655544322  234556666666666666666666666666666666666666666666666666666666666


Q ss_pred             CCCCcc
Q psy3308         801 ATTNLF  806 (838)
Q Consensus       801 ~~~~~~  806 (838)
                      .+|..|
T Consensus       683 ~~~~~g  688 (823)
T PLN03192        683 KANTDD  688 (823)
T ss_pred             CCCCCC
Confidence            666555

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.91  E-value=5.6e-24  Score=242.20  Aligned_cols=220  Identities=24%  Similarity=0.286  Sum_probs=185.9

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhC--CCCCCCCCCCCCcHHH-HHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHH
Q psy3308         574 KGFTPLHLAAKYGRMKIAQMLLQK--DAPVDSQGKNGVTPLH-VASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAK  650 (838)
Q Consensus       574 ~~~~~l~~a~~~~~~~~v~~Ll~~--~~~~~~~~~~~~~~l~-~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~  650 (838)
                      .++..+..|++.|+.+.++.+++.  +.++|..|..|.|||| .|+..++.+++++|+++|+    .+..|.||||.|+.
T Consensus        16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~   91 (743)
T TIGR00870        16 DEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISL   91 (743)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHh
Confidence            456889999999999999999999  8999999999999999 8999999999999999987    56689999999987


Q ss_pred             c---CcHHHHHHHHhCCCC------C----CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-------------
Q psy3308         651 K---NQMDIATTLLEYNAK------P----NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA-------------  704 (838)
Q Consensus       651 ~---~~~~iv~~Ll~~~~~------~----~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-------------  704 (838)
                      .   +..++++.+...+.+      +    ......|.||||.|+.+|+.++|++|+++|++++.++             
T Consensus        92 ~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~  171 (743)
T TIGR00870        92 EYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDS  171 (743)
T ss_pred             ccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCc
Confidence            2   223344444444322      1    1123468999999999999999999999999998653             


Q ss_pred             -CCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC---------CHHHHHHHHHCCCCC-------c
Q psy3308         705 -KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG---------QLNMVRYLVENGANV-------N  767 (838)
Q Consensus       705 -~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g---------~~~~v~~Ll~~g~~~-------~  767 (838)
                       ..|.|||+.|+..|+.+++++|+++|++++.+|..|+||||+|+..+         ...+.+++++.++..       +
T Consensus       172 ~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~  251 (743)
T TIGR00870       172 FYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEV  251 (743)
T ss_pred             ccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhh
Confidence             25889999999999999999999999999999999999999999987         345667777765554       6


Q ss_pred             cCCCCCCcHHHHHHHhCcHHHHHHHHhCCC
Q psy3308         768 ATTNLGYTPLHQASQQGRVLIIDLLLGAGA  797 (838)
Q Consensus       768 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga  797 (838)
                      ..|.+|.|||++|+..|+.+++++|++.++
T Consensus       252 i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~  281 (743)
T TIGR00870       252 ILNHQGLTPLKLAAKEGRIVLFRLKLAIKY  281 (743)
T ss_pred             hcCCCCCCchhhhhhcCCccHHHHHHHHHH
Confidence            678999999999999999999999999543

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.91  E-value=2.6e-23  Score=237.27  Aligned_cols=194  Identities=21%  Similarity=0.272  Sum_probs=173.3

Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCC
Q psy3308         588 MKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKP  667 (838)
Q Consensus       588 ~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~  667 (838)
                      .++-..+.+.+...  .+..+.++|+.|+..|+.++++.|++.|++++..|..|.||||.|+..|+.+++++|+++|+++
T Consensus       507 l~v~~ll~~~~~~~--~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadi  584 (823)
T PLN03192        507 LNVGDLLGDNGGEH--DDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNV  584 (823)
T ss_pred             ccHHHHHhhccccc--CCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCC
Confidence            44445555554432  3345678999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q psy3308         668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIA  747 (838)
Q Consensus       668 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A  747 (838)
                      +.+|..|.||||.|+..|+.+++++|++.++..+  ...+.++||.|+..|+.+++++|+++|+++|.+|..|+||||+|
T Consensus       585 n~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A  662 (823)
T PLN03192        585 HIRDANGNTALWNAISAKHHKIFRILYHFASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVA  662 (823)
T ss_pred             CCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence            9999999999999999999999999999887654  34577999999999999999999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHHCCCCCccCCCCC-CcHHHHHHHhCc
Q psy3308         748 SHFGQLNMVRYLVENGANVNATTNLG-YTPLHQASQQGR  785 (838)
Q Consensus       748 ~~~g~~~~v~~Ll~~g~~~~~~~~~g-~t~l~~A~~~~~  785 (838)
                      +..|+.+++++|+++|++++..|..| .||+..+.....
T Consensus       663 ~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~~~  701 (823)
T PLN03192        663 MAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELLQK  701 (823)
T ss_pred             HHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999988 899988865443

>KOG0514|consensus

Probab=99.89  E-value=2e-23  Score=193.08  Aligned_cols=161  Identities=25%  Similarity=0.391  Sum_probs=129.8

Q ss_pred             CCccCCCCChHHHHHHHcCcHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHc-----CcHHHHHHHHhCCCCCCCC-CCC
Q psy3308         634 PHAVAKNGYTPLHIAAKKNQMDIATTLLEYN-AKPNAESKAGFTPLHLSAQE-----GHTDMSSLLIEHGATVSHQ-AKN  706 (838)
Q Consensus       634 ~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~-~~~~~~~~~g~t~L~~A~~~-----g~~~iv~~Ll~~g~~~~~~-~~~  706 (838)
                      +|..|.+|+|+||+|+.+.++++|+.||+.| ++++..+..|.||++.|+..     .+.++|.-|...| ++|.+ ...
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~  339 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH  339 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence            3456777888888888888888888888876 56777788888888877643     3567777777776 45554 456


Q ss_pred             CCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCccCCCCCCcHHHHHHHhCc
Q psy3308         707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN-GANVNATTNLGYTPLHQASQQGR  785 (838)
Q Consensus       707 ~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~  785 (838)
                      |.|+||+|+..|+.++|+.|+.-|+++|.+|.+|.|+||+|+.+||.+||++|+.. ++|....|.+|.|||+.|...||
T Consensus       340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh  419 (452)
T KOG0514|consen  340 GQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGH  419 (452)
T ss_pred             cchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCc
Confidence            88888888888888888888888888888888888888888888888888888886 78888888889999999999998


Q ss_pred             HHHHHHHHhC
Q psy3308         786 VLIIDLLLGA  795 (838)
Q Consensus       786 ~~~v~~Ll~~  795 (838)
                      -+|.-+|..+
T Consensus       420 ~eIa~mlYa~  429 (452)
T KOG0514|consen  420 REIAVMLYAH  429 (452)
T ss_pred             hHHHHHHHHH
Confidence            8888888754

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.89  E-value=8.4e-23  Score=184.12  Aligned_cols=146  Identities=18%  Similarity=0.219  Sum_probs=126.0

Q ss_pred             CCCCCCCCCCCCCcHHHHHHHcCcH----HHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHH---HHHHHHhCCCCCCC
Q psy3308         663 YNAKPNAESKAGFTPLHLSAQEGHT----DMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVN---VATITMFNGAEIDP  735 (838)
Q Consensus       663 ~~~~~~~~~~~g~t~L~~A~~~g~~----~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~---i~~~L~~~~~~~~~  735 (838)
                      ++++++..+..+.++|+.|++.|+.    +++++|++.|+.++..+..|+||||+|+..|+.+   ++++|+++|++++.
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~   88 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA   88 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence            4556666777778888888888887    6667788888888888888999999999888765   47899999999999


Q ss_pred             CC-CCCCcHHHHHHHcCCHHHHHHHHH-CCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch
Q psy3308         736 VT-KAGFTPLHIASHFGQLNMVRYLVE-NGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC  808 (838)
Q Consensus       736 ~~-~~g~t~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~  808 (838)
                      ++ ..|.||||+|+..|+.+++++|++ .|++++..|..|.||||+|+..++.+++++|+++|++++.++..|.+
T Consensus        89 ~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~  163 (166)
T PHA02743         89 RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGLS  163 (166)
T ss_pred             CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCcc
Confidence            88 589999999999999999999995 79999999999999999999999999999999999999999887753

>KOG0505|consensus

Probab=99.89  E-value=7.6e-23  Score=200.62  Aligned_cols=225  Identities=27%  Similarity=0.366  Sum_probs=154.9

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHH
Q psy3308         577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDI  656 (838)
Q Consensus       577 ~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~i  656 (838)
                      -.+..|+..+..+-|+.|+..|+.++..+.+|.|+||.++...+.+||++|+++|+++|..|..++||||.|+-.|++.+
T Consensus        42 a~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i  121 (527)
T KOG0505|consen   42 AVFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNI  121 (527)
T ss_pred             HHHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHH
Confidence            34667888899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHhHHHHhcCC----H-HHHHHHHhCC
Q psy3308         657 ATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH-GATVSHQAKNGLTPLHLCAQEDK----V-NVATITMFNG  730 (838)
Q Consensus       657 v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~A~~~g~----~-~i~~~L~~~~  730 (838)
                      +++|+.+|+++...+..|..|+..+...-..+++..-... |.++            -|++.-.    + ++-.++. .|
T Consensus       122 ~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~i------------ea~R~~~e~~ml~D~~q~l~-~G  188 (527)
T KOG0505|consen  122 VEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDI------------EAARKAEEQTMLDDARQWLN-AG  188 (527)
T ss_pred             HHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccH------------HHHhhhhHHHHHHHHHHHHh-cc
Confidence            9999999999888888887777665543333333222111 1111            1111100    0 2223333 45


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-H
Q psy3308         731 AEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-A  809 (838)
Q Consensus       731 ~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~  809 (838)
                      .+.+..+..|.|+||.|+.+|..+..++|++.|.+++.+|.+||||||.|+.=|+.++.++|+++|++.+..+..|++ +
T Consensus       189 ~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~  268 (527)
T KOG0505|consen  189 AELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPL  268 (527)
T ss_pred             ccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCc
Confidence            555555555666666666666666666666666666666666666666666666666666666666666666666666 5


Q ss_pred             HHHHH
Q psy3308         810 TILVK  814 (838)
Q Consensus       810 ~~~~~  814 (838)
                      +++.+
T Consensus       269 dv~de  273 (527)
T KOG0505|consen  269 DVADE  273 (527)
T ss_pred             cchhh
Confidence            55443

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.89  E-value=2.3e-22  Score=228.96  Aligned_cols=225  Identities=20%  Similarity=0.174  Sum_probs=126.9

Q ss_pred             cHHHHHHHcCcHHHHHHHHHC--CCCCCccccCCCcHHH-HHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcC-
Q psy3308          97 TPLYMAAQENHDGVVRYLLSK--GGNQTLATEHNITPLH-VACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSG-  172 (838)
Q Consensus        97 t~l~~A~~~g~~~~v~~L~~~--~~~~~~~~~~~~~~l~-~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g-  172 (838)
                      ++|+.||+.|+.+.|+.++++  +.++|..|..|.|||| .|+.+++.+++++|+++|+    .+..|.||||.|+.++ 
T Consensus        19 ~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~   94 (743)
T TIGR00870        19 KAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEYV   94 (743)
T ss_pred             HHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccH
Confidence            444444444444444444444  4444444444444444 4444444444444444443    2334444444444311 


Q ss_pred             --CHHHHHHHHHcCCCc----------cCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcc--------------cCC
Q psy3308         173 --HDNVIDILIEKGAAL----------YSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEI--------------TVD  226 (838)
Q Consensus       173 --~~~iv~~L~~~~~~~----------~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~--------------~~~  226 (838)
                        ..+++.++...+...          ......|.||||+|+..|+.++|++|+++|++++..              ...
T Consensus        95 ~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~  174 (743)
T TIGR00870        95 DAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYH  174 (743)
T ss_pred             HHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccc
Confidence              111222222222110          001123445555555555555555555555444422              134


Q ss_pred             CccHHHHHHhcCCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCcccccc-ChHHHHHHHHhCCCCC-------CCCC
Q psy3308         227 YLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHC-NHVWVAKTLLDRKADP-------NARA  298 (838)
Q Consensus       227 ~~~~l~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~-~~~~i~~~Ll~~~~~~-------~~~~  298 (838)
                      +.+||+.|+..|+.+++++|++.|++++..+..|+||+|.|+..+....... ....+.+++++.+..+       +..+
T Consensus       175 g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N  254 (743)
T TIGR00870       175 GESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILN  254 (743)
T ss_pred             cccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcC
Confidence            7899999999999999999999999999999999999999998763221000 0123445555544433       5567


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy3308         299 LNGFTPLHIACKKNRYKVVELLLKYGA  325 (838)
Q Consensus       299 ~~~~~~l~~A~~~g~~~~v~~L~~~~~  325 (838)
                      .+|.|||+.|+..|+.+++++|++.+.
T Consensus       255 ~~g~TPL~~A~~~g~~~l~~lLL~~~~  281 (743)
T TIGR00870       255 HQGLTPLKLAAKEGRIVLFRLKLAIKY  281 (743)
T ss_pred             CCCCCchhhhhhcCCccHHHHHHHHHH
Confidence            788888888888888888888887543

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.87  E-value=1.8e-21  Score=175.48  Aligned_cols=145  Identities=17%  Similarity=0.220  Sum_probs=118.9

Q ss_pred             CCCCCCccCCCCChHHHHHHHcCcH----HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHH---HHHHHHhCCCCCCC
Q psy3308         630 RGASPHAVAKNGYTPLHIAAKKNQM----DIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD---MSSLLIEHGATVSH  702 (838)
Q Consensus       630 ~g~~~~~~~~~~~t~L~~A~~~~~~----~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~---iv~~Ll~~g~~~~~  702 (838)
                      ++++++..+..+.+++|.|++.|++    +++++|.+.|..++.+|..|+||||+|+..|+.+   ++++|+++|++++.
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~   88 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA   88 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence            4556666666777888888888887    5666777888888888888888888888887754   47888888888888


Q ss_pred             CC-CCCCcHhHHHHhcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCC
Q psy3308         703 QA-KNGLTPLHLCAQEDKVNVATITMF-NGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGY  774 (838)
Q Consensus       703 ~~-~~~~t~l~~A~~~g~~~i~~~L~~-~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~  774 (838)
                      ++ ..|.||||+|+..|+.+++++|+. .|++++.++..|+||||+|+..++.+++++|+++|++++.++..|.
T Consensus        89 ~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~  162 (166)
T PHA02743         89 RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL  162 (166)
T ss_pred             CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence            87 478889999998888888888885 7888888888899999999998999999999999998888887664

>KOG0514|consensus

Probab=99.86  E-value=2.1e-21  Score=179.81  Aligned_cols=168  Identities=27%  Similarity=0.378  Sum_probs=135.4

Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCccCCCCChHHHHHHHc-----CcHHHHHHHH
Q psy3308         588 MKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRG-ASPHAVAKNGYTPLHIAAKK-----NQMDIATTLL  661 (838)
Q Consensus       588 ~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~~t~L~~A~~~-----~~~~iv~~Ll  661 (838)
                      .++++|.+      |..|.+|+|+||+|+...++++|+.|++.| ++++..+..|.||++.++..     .+.++|..|.
T Consensus       254 ~~lL~yvV------NlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF  327 (452)
T KOG0514|consen  254 PPLLEYVV------NLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLF  327 (452)
T ss_pred             hHHHHHHh------hhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHH
Confidence            45555554      557778888888888888888888888774 67777788888888887643     4677888888


Q ss_pred             hCCCCCCCC-CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhC-CCCCCCCCCC
Q psy3308         662 EYNAKPNAE-SKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN-GAEIDPVTKA  739 (838)
Q Consensus       662 ~~~~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~-~~~~~~~~~~  739 (838)
                      ..| ++|.+ .+.|+|+|+.|+.+|+.++|+.|+..|+++|.+|.+|.|+||.|++.||.+|++.|+.. ++++...|.+
T Consensus       328 ~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~D  406 (452)
T KOG0514|consen  328 KMG-DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVD  406 (452)
T ss_pred             hcc-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCC
Confidence            876 44544 46788999999999999999999999999999999999999999999999999988865 6777778888


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHC
Q psy3308         740 GFTPLHIASHFGQLNMVRYLVEN  762 (838)
Q Consensus       740 g~t~l~~A~~~g~~~~v~~Ll~~  762 (838)
                      |.|+|+.|...||.+|.-+|..+
T Consensus       407 gSTAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  407 GSTALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             CchhhhhHHhcCchHHHHHHHHH
Confidence            99999999999999998888765

>KOG0505|consensus

Probab=99.86  E-value=1.9e-21  Score=190.92  Aligned_cols=226  Identities=29%  Similarity=0.446  Sum_probs=194.0

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCC
Q psy3308         528 PLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKN  607 (838)
Q Consensus       528 ~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~  607 (838)
                      .+.-|+..|..+-++.|+..+.                 .++..+.+|.|++|.++...+.+||++|+++|++||..|..
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga-----------------~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e  105 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGA-----------------SPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNE  105 (527)
T ss_pred             HHHhccccccHHHHHHHhccCC-----------------CccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccc
Confidence            4556788888888888887653                 34677889999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcC-
Q psy3308         608 GVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLE-YNAKPNAESKAGFTPLHLSAQEG-  685 (838)
Q Consensus       608 ~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~-~~~~~~~~~~~g~t~L~~A~~~g-  685 (838)
                      ++||+|.|+.+++..++++|+..|+++...+..|..|...+...-..+++..-.. .|++           +..+-... 
T Consensus       106 ~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~-----------iea~R~~~e  174 (527)
T KOG0505|consen  106 GWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGID-----------IEAARKAEE  174 (527)
T ss_pred             cCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhccc-----------HHHHhhhhH
Confidence            9999999999999999999999999999999999999888877766666665544 2333           11221111 


Q ss_pred             ---cHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy3308         686 ---HTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN  762 (838)
Q Consensus       686 ---~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~  762 (838)
                         -.++-+|+. .|...+.....|.|+||.|+-+|..++.++|+..|.+++.+|.+|+||||.|+..|+.++++.|+++
T Consensus       175 ~~ml~D~~q~l~-~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~  253 (527)
T KOG0505|consen  175 QTMLDDARQWLN-AGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEH  253 (527)
T ss_pred             HHHHHHHHHHHh-ccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHh
Confidence               135556666 7888887877799999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCCcHHHHHHH
Q psy3308         763 GANVNATTNLGYTPLHQASQ  782 (838)
Q Consensus       763 g~~~~~~~~~g~t~l~~A~~  782 (838)
                      |++++..+..|.||+.+|..
T Consensus       254 ga~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  254 GADMDAKTKMGETPLDVADE  273 (527)
T ss_pred             hcccchhhhcCCCCccchhh
Confidence            99999999999999999885

>PHA02741 hypothetical protein; Provisional

Probab=99.85  E-value=1.4e-20  Score=171.01  Aligned_cols=131  Identities=20%  Similarity=0.295  Sum_probs=110.7

Q ss_pred             CCCCCCCcHHHHHHHcCcHHHHHHHHh------CCCCCCCCCCCCCcHhHHHHhcCC----HHHHHHHHhCCCCCCCCCC
Q psy3308         669 AESKAGFTPLHLSAQEGHTDMSSLLIE------HGATVSHQAKNGLTPLHLCAQEDK----VNVATITMFNGAEIDPVTK  738 (838)
Q Consensus       669 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~------~g~~~~~~~~~~~t~l~~A~~~g~----~~i~~~L~~~~~~~~~~~~  738 (838)
                      .++..|.||||+|++.|+.+++++|++      .|++++.++..|.||||+|+..|+    .+++++|++.|++++.++.
T Consensus        16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~   95 (169)
T PHA02741         16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEM   95 (169)
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCc
Confidence            456677888888888888888887743      357788888888999999998888    4788899999999998885


Q ss_pred             -CCCcHHHHHHHcCCHHHHHHHHH-CCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCC
Q psy3308         739 -AGFTPLHIASHFGQLNMVRYLVE-NGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP  799 (838)
Q Consensus       739 -~g~t~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~  799 (838)
                       .|+||||+|+..++.+++++|++ .|++++..|..|+|||++|+..++.+++++|++.++..
T Consensus        96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741         96 LEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence             89999999999999999999997 48999999999999999999999999999999876653

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.84  E-value=6e-20  Score=177.62  Aligned_cols=146  Identities=22%  Similarity=0.248  Sum_probs=91.4

Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCCCCCC----CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC-CCCCCcHhHHHHhcC
Q psy3308         644 PLHIAAKKNQMDIATTLLEYNAKPNAES----KAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQ-AKNGLTPLHLCAQED  718 (838)
Q Consensus       644 ~L~~A~~~~~~~iv~~Ll~~~~~~~~~~----~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~~t~l~~A~~~g  718 (838)
                      +|+.|+..|+.+++++|+++|++++..+    ..|.||||+|+..++.+++++|+++|++++.. +..|.||||.|+..|
T Consensus        36 lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~  115 (300)
T PHA02884         36 ILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHG  115 (300)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcC
Confidence            4455555566666666666666666552    35666666666666666666666666666664 345666666666666


Q ss_pred             CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCC
Q psy3308         719 KVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA  797 (838)
Q Consensus       719 ~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga  797 (838)
                      +.+++++|+++|++++.+|..|.|||++|+..++.+++..+.+  ..   .+..+.+|+.++   ++.+++++|+.+++
T Consensus       116 ~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        116 CLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICD--NE---ISNFYKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcC--Cc---ccccccChhhhh---ccHHHHHHHHHHHH
Confidence            6666666666666666666666677777666666666554432  11   234455666654   35667777776666

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.83  E-value=2.3e-20  Score=167.39  Aligned_cols=132  Identities=25%  Similarity=0.320  Sum_probs=108.1

Q ss_pred             CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCC--C-----CCCCCCCCCcHhHHHHhcCCHH---HHHHHHhCCCCCCCCC
Q psy3308         668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGA--T-----VSHQAKNGLTPLHLCAQEDKVN---VATITMFNGAEIDPVT  737 (838)
Q Consensus       668 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~--~-----~~~~~~~~~t~l~~A~~~g~~~---i~~~L~~~~~~~~~~~  737 (838)
                      +..|..|.||||+|++.|+.  +.++...+.  +     ++..+..|.||||+|+..|+.+   ++++|+++|++++.++
T Consensus        11 ~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~   88 (154)
T PHA02736         11 SEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKE   88 (154)
T ss_pred             HhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccC
Confidence            34556677888888877763  333332221  1     2345778999999999999874   6889999999999998


Q ss_pred             -CCCCcHHHHHHHcCCHHHHHHHHHC-CCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCC
Q psy3308         738 -KAGFTPLHIASHFGQLNMVRYLVEN-GANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA  801 (838)
Q Consensus       738 -~~g~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~  801 (838)
                       ..|+||||+|+..|+.+++++|+++ |++++..|..|.|||++|+..|+.+++++|+++|++.++
T Consensus        89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~~  154 (154)
T PHA02736         89 RVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCKV  154 (154)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence             4899999999999999999999985 999999999999999999999999999999999998764

>PHA02741 hypothetical protein; Provisional

Probab=99.82  E-value=1.5e-19  Score=164.15  Aligned_cols=131  Identities=25%  Similarity=0.301  Sum_probs=107.5

Q ss_pred             ccCCCCChHHHHHHHcCcHHHHHHHHh------CCCCCCCCCCCCCcHHHHHHHcCc----HHHHHHHHhCCCCCCCCCC
Q psy3308         636 AVAKNGYTPLHIAAKKNQMDIATTLLE------YNAKPNAESKAGFTPLHLSAQEGH----TDMSSLLIEHGATVSHQAK  705 (838)
Q Consensus       636 ~~~~~~~t~L~~A~~~~~~~iv~~Ll~------~~~~~~~~~~~g~t~L~~A~~~g~----~~iv~~Ll~~g~~~~~~~~  705 (838)
                      ..+..|.||||.|+..|+.++++.|++      .|++++.+|..|+||||+|+..|+    .+++++|++.|++++.++.
T Consensus        16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~   95 (169)
T PHA02741         16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEM   95 (169)
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCc
Confidence            345677888888888888888887753      357778888888888888888887    5788888888888888874


Q ss_pred             -CCCcHhHHHHhcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy3308         706 -NGLTPLHLCAQEDKVNVATITMF-NGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV  766 (838)
Q Consensus       706 -~~~t~l~~A~~~g~~~i~~~L~~-~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~  766 (838)
                       .|.||||+|+..++.+++++|+. .|++++..+..|+|||++|+..|+.+++++|++.++..
T Consensus        96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741         96 LEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence             78889999998888898888887 58888888888999999999999999999988875543

>KOG0512|consensus

Probab=99.82  E-value=1.7e-19  Score=148.65  Aligned_cols=138  Identities=28%  Similarity=0.384  Sum_probs=89.1

Q ss_pred             HHHHHHcCcHHHHHHHHhCCC-CCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q psy3308         678 LHLSAQEGHTDMSSLLIEHGA-TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMV  756 (838)
Q Consensus       678 L~~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v  756 (838)
                      +.+|+..+....|+.|++..+ .+|.+|..|.||||.|+.+|+++|+..|+..|++++.+...|+||||-|++..+.+++
T Consensus        67 ~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va  146 (228)
T KOG0512|consen   67 LLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVA  146 (228)
T ss_pred             HHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHH
Confidence            345666666666665555433 3566666666666666666666666666666666666666677777777777777777


Q ss_pred             HHHHHCCCCCccCCCCCCcHHHHHHHhCc-HHHHHHHHhC-CCCCCCCCCccch-HHHHHHc
Q psy3308         757 RYLVENGANVNATTNLGYTPLHQASQQGR-VLIIDLLLGA-GAQPNATTNLFCC-ATILVKN  815 (838)
Q Consensus       757 ~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~-~~~v~~Ll~~-ga~~~~~~~~~~~-~~~~~~~  815 (838)
                      .+|+.+|+|+|...+...||||.|+.+.+ ...+++|+.. +.+|-..++.+.| +++|.+-
T Consensus       147 ~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT  208 (228)
T KOG0512|consen  147 GRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRT  208 (228)
T ss_pred             HHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHh
Confidence            77777777777766666677777765543 3445555543 6666666677777 6666554

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.81  E-value=4.1e-19  Score=171.87  Aligned_cols=146  Identities=23%  Similarity=0.277  Sum_probs=91.2

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCccC----CCCChHHHHHHHcCcHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcC
Q psy3308         611 PLHVASHYDHQNVALLLLDRGASPHAVA----KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE-SKAGFTPLHLSAQEG  685 (838)
Q Consensus       611 ~l~~A~~~~~~~~v~~Ll~~g~~~~~~~----~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~-~~~g~t~L~~A~~~g  685 (838)
                      +|+.|+..++.+++++|+++|++++..+    ..|.||||.|+..++.+++++|+++|++++.. +..|.||||.|+..|
T Consensus        36 lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~  115 (300)
T PHA02884         36 ILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHG  115 (300)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcC
Confidence            4455555566666666666666666542    35666677666666666777776666666664 345666777776666


Q ss_pred             cHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q psy3308         686 HTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA  764 (838)
Q Consensus       686 ~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~  764 (838)
                      +.+++++|+++|++++.++..|.||||+|++.++.+++..+.  |..   .+..+.+|++++   ++.+++++|+.+++
T Consensus       116 ~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        116 CLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC--DNE---ISNFYKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CCc---ccccccChhhhh---ccHHHHHHHHHHHH
Confidence            777777777777766666666667777776666666554443  211   334445566643   35677777776655

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.78  E-value=1.7e-18  Score=139.01  Aligned_cols=89  Identities=38%  Similarity=0.618  Sum_probs=80.4

Q ss_pred             hHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHH
Q psy3308         711 LHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIID  790 (838)
Q Consensus       711 l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~  790 (838)
                      ||.|++.|+.+++++|++.+.+++.    |+||||+|+..|+.+++++|+++|++++..|..|+||||+|+.+|+.++++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~   76 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK   76 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            6889999999999999998888766    889999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCC
Q psy3308         791 LLLGAGAQPNATT  803 (838)
Q Consensus       791 ~Ll~~ga~~~~~~  803 (838)
                      +|+++|++++.+|
T Consensus        77 ~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   77 LLLEHGADVNIRN   89 (89)
T ss_dssp             HHHHTTT-TTSS-
T ss_pred             HHHHcCCCCCCcC
Confidence            9999999999886

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.78  E-value=1.1e-18  Score=156.47  Aligned_cols=129  Identities=22%  Similarity=0.260  Sum_probs=97.5

Q ss_pred             cCCCCChHHHHHHHcCcHHHHHHHHhCC--CC-----CCCCCCCCCcHHHHHHHcCcH---HHHHHHHhCCCCCCCCC-C
Q psy3308         637 VAKNGYTPLHIAAKKNQMDIATTLLEYN--AK-----PNAESKAGFTPLHLSAQEGHT---DMSSLLIEHGATVSHQA-K  705 (838)
Q Consensus       637 ~~~~~~t~L~~A~~~~~~~iv~~Ll~~~--~~-----~~~~~~~g~t~L~~A~~~g~~---~iv~~Ll~~g~~~~~~~-~  705 (838)
                      .+..|.||||+|+..|+.  ++.+...+  .+     ++.++..|+||||+|+..|+.   +++++|++.|++++.++ .
T Consensus        13 ~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~   90 (154)
T PHA02736         13 PDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERV   90 (154)
T ss_pred             cCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCC
Confidence            445566666666666653  22221111  11     223567788888888888876   46788888898888887 4


Q ss_pred             CCCcHhHHHHhcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCc
Q psy3308         706 NGLTPLHLCAQEDKVNVATITMF-NGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN  767 (838)
Q Consensus       706 ~~~t~l~~A~~~g~~~i~~~L~~-~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~  767 (838)
                      .|.||||+|+..|+.+++++|+. .|++++.++..|+|||++|+..|+.+++++|+++|++++
T Consensus        91 ~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736         91 FGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             CCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            88899999999999999998887 488888888899999999999999999999999888765

>KOG0512|consensus

Probab=99.78  E-value=3.1e-18  Score=141.22  Aligned_cols=141  Identities=29%  Similarity=0.390  Sum_probs=106.9

Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHH
Q psy3308         644 PLHIAAKKNQMDIATTLLEYNAK-PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNV  722 (838)
Q Consensus       644 ~L~~A~~~~~~~iv~~Ll~~~~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i  722 (838)
                      .+.+|+..+.+..|+.|++..++ +|.+|.+|.||||.|+.+||.+||+.|+..|++++.+...|+||||.|+...+.++
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~v  145 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEV  145 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhH
Confidence            35567777778888877775544 67778888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHH-CCCCCccCCCCCCcHHHHHHHhC
Q psy3308         723 ATITMFNGAEIDPVTKAGFTPLHIASHFGQ-LNMVRYLVE-NGANVNATTNLGYTPLHQASQQG  784 (838)
Q Consensus       723 ~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~-~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~  784 (838)
                      +-+|+.+|+++|.+.....||||.|+...+ ...+.+|+. .+.++..+++.+.||++.|-+.+
T Consensus       146 a~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  146 AGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             HHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence            888888888888877777788888876654 344455444 36777778888888888887764

>KOG0195|consensus

Probab=99.73  E-value=1.2e-17  Score=149.67  Aligned_cols=144  Identities=30%  Similarity=0.474  Sum_probs=117.0

Q ss_pred             HHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCC
Q psy3308         659 TLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTK  738 (838)
Q Consensus       659 ~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~  738 (838)
                      ||-+..-|.|.-|..|.+|||+|++.|+..+|+.|+..|+.+|..+....||||+|+..||-++|..|++..+++|..+.
T Consensus        19 wld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavne   98 (448)
T KOG0195|consen   19 WLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNE   98 (448)
T ss_pred             EecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhc
Confidence            34445556777788888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCC
Q psy3308         739 AGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT  802 (838)
Q Consensus       739 ~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~  802 (838)
                      +|.||||||+..|...+++-|+..|+-+++.+++|.|||..|--.-.--+.+..-++|-.+|..
T Consensus        99 hgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~nri  162 (448)
T KOG0195|consen   99 HGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPNRI  162 (448)
T ss_pred             cCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCCcc
Confidence            8999999999999888889999999998888888999988876544444444444668777753

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.73  E-value=4.3e-17  Score=130.79  Aligned_cols=88  Identities=35%  Similarity=0.622  Sum_probs=68.8

Q ss_pred             HHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCCHHHHH
Q psy3308          99 LYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVID  178 (838)
Q Consensus        99 l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~iv~  178 (838)
                      ||+||+.|+++++++|++.+.+++.    |.||||+||.+|+.+++++|+++|++++.++..|.||||+|+.+|+.++++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~   76 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK   76 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            6788888888888888887766554    677888888888888888888888888888888888888888888888888


Q ss_pred             HHHHcCCCccCC
Q psy3308         179 ILIEKGAALYSK  190 (838)
Q Consensus       179 ~L~~~~~~~~~~  190 (838)
                      +|+++|++++.+
T Consensus        77 ~Ll~~g~~~~~~   88 (89)
T PF12796_consen   77 LLLEHGADVNIR   88 (89)
T ss_dssp             HHHHTTT-TTSS
T ss_pred             HHHHcCCCCCCc
Confidence            888888776543

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0195|consensus

Probab=99.71  E-value=3.8e-17  Score=146.55  Aligned_cols=123  Identities=37%  Similarity=0.524  Sum_probs=109.6

Q ss_pred             HHHHCCCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccC
Q psy3308          80 ILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTR  159 (838)
Q Consensus        80 ~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~  159 (838)
                      ||-+...|.|.-|..|.+|||+||+.|+..+|+.|+.+|+.+|.++....||||+||.+||-+||+.|++..+++|..+.
T Consensus        19 wld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavne   98 (448)
T KOG0195|consen   19 WLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNE   98 (448)
T ss_pred             EecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhc
Confidence            44455667788888999999999999999999999999999998888888999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHH
Q psy3308         160 DGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMAS  202 (838)
Q Consensus       160 ~~~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~  202 (838)
                      .|.||||+||-.|...|.+-|+..|+.++..++.|.+|++.|-
T Consensus        99 hgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen   99 HGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             cCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence            9999999999999999999999999998888888999988874

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.69  E-value=5.7e-16  Score=135.16  Aligned_cols=124  Identities=40%  Similarity=0.723  Sum_probs=99.8

Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy3308         670 ESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASH  749 (838)
Q Consensus       670 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~  749 (838)
                      .+..|.|||++|+..++.+++++|++.+.+.+..+..|.+|++.|+..++.+++++|+.++..++..+..|.||+|+|+.
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~   82 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR   82 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence            34567788888888888888888888877777777778888888888888888888888887777777778888888888


Q ss_pred             cCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHH
Q psy3308         750 FGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL  793 (838)
Q Consensus       750 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll  793 (838)
                      .++.+++++|+++|.+++..+..|.||+++|...++.+++++|+
T Consensus        83 ~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          83 NGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            88888888888888888888888888888888888888888774

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG3676|consensus

Probab=99.69  E-value=2.3e-16  Score=163.80  Aligned_cols=123  Identities=25%  Similarity=0.352  Sum_probs=100.7

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC-----------------------CCCCCcHhHHHHhcCCHHHHHHHHhC
Q psy3308         673 AGFTPLHLSAQEGHTDMSSLLIEHGATVSHQ-----------------------AKNGLTPLHLCAQEDKVNVATITMFN  729 (838)
Q Consensus       673 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-----------------------~~~~~t~l~~A~~~g~~~i~~~L~~~  729 (838)
                      .|.||||.|+.+.+.++|++|++.||||+.+                       --.|..||-+||.-++.+|+++|+++
T Consensus       183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~  262 (782)
T KOG3676|consen  183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH  262 (782)
T ss_pred             cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc
Confidence            4455555555555555555555555554432                       12467899999999999999999999


Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC--CccCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         730 GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN--VNATTNLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       730 ~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      |+|++.+|..|.|.||..+..-..+|-.+++++|++  ..+.++.|.|||.+|+..|+.+|.+.+++.
T Consensus       263 gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  263 GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            999999999999999999999899999999999999  888999999999999999999999999987

>KOG4214|consensus

Probab=99.68  E-value=2e-16  Score=115.36  Aligned_cols=103  Identities=24%  Similarity=0.394  Sum_probs=86.5

Q ss_pred             cHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHH
Q psy3308         709 TPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLI  788 (838)
Q Consensus       709 t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~  788 (838)
                      ..+.+++++|.++-|+-.+..|.++|..- .|++|||+|+-+|++++++||+..|++++.+|+.|.|||..|+-.||.+|
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c   82 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC   82 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence            34677888888888887777777776554 78899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccchHHHH
Q psy3308         789 IDLLLGAGAQPNATTNLFCCATIL  812 (838)
Q Consensus       789 v~~Ll~~ga~~~~~~~~~~~~~~~  812 (838)
                      |++|+++|||..++.-+|+++--|
T Consensus        83 VklLL~~GAdrt~~~PdG~~~~ea  106 (117)
T KOG4214|consen   83 VKLLLQNGADRTIHAPDGTALIEA  106 (117)
T ss_pred             HHHHHHcCcccceeCCCchhHHhh
Confidence            999999999999888888884333

>KOG3676|consensus

Probab=99.66  E-value=1.5e-15  Score=157.82  Aligned_cols=208  Identities=25%  Similarity=0.300  Sum_probs=166.7

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCC---------CCCCCCCCCCCcHHHHHHHc---CCHHHHHHHHhCCCC-CC---cc-CC
Q psy3308         577 TPLHLAAKYGRMKIAQMLLQKD---------APVDSQGKNGVTPLHVASHY---DHQNVALLLLDRGAS-PH---AV-AK  639 (838)
Q Consensus       577 ~~l~~a~~~~~~~~v~~Ll~~~---------~~~~~~~~~~~~~l~~A~~~---~~~~~v~~Ll~~g~~-~~---~~-~~  639 (838)
                      .++..+...+..+....+...+         .+++.+...|.|.||.|..+   ++.++++.|++.-.. +|   .. .-
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY  182 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY  182 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence            4566666677776666665544         56777788999999999874   455888888875221 11   11 23


Q ss_pred             CCChHHHHHHHcCcHHHHHHHHhCCCCCCCC---------CC--------------CCCcHHHHHHHcCcHHHHHHHHhC
Q psy3308         640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAE---------SK--------------AGFTPLHLSAQEGHTDMSSLLIEH  696 (838)
Q Consensus       640 ~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~---------~~--------------~g~t~L~~A~~~g~~~iv~~Ll~~  696 (838)
                      .|.||||+|+.+.+.++|++|++.|+|++.+         |.              -|..||-+|+..++.||+++|+++
T Consensus       183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~  262 (782)
T KOG3676|consen  183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH  262 (782)
T ss_pred             cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc
Confidence            6899999999999999999999999998766         11              257899999999999999999999


Q ss_pred             CCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHHC-C----------
Q psy3308         697 GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAE--IDPVTKAGFTPLHIASHFGQLNMVRYLVEN-G----------  763 (838)
Q Consensus       697 g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~--~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~-g----------  763 (838)
                      |+|++.+|..|.|.||..+..-..++...+++.|+.  ...++..|-|||..|++-|+.+|.+.+++. +          
T Consensus       263 gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k~~~W~YGpvt  342 (782)
T KOG3676|consen  263 GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRKFTDWAYGPVT  342 (782)
T ss_pred             CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHhhcccceeecccc
Confidence            999999999999999999999888999999999999  778899999999999999999999999997 2          


Q ss_pred             ---CCCccCCCC--CCcHHHHHHHhC
Q psy3308         764 ---ANVNATTNL--GYTPLHQASQQG  784 (838)
Q Consensus       764 ---~~~~~~~~~--g~t~l~~A~~~~  784 (838)
                         .+++..|..  -.++|...+.+.
T Consensus       343 sslYpL~~iDT~~n~~SvLeivvyg~  368 (782)
T KOG3676|consen  343 SSLYPLNSIDTIGNENSVLEIVVYGI  368 (782)
T ss_pred             cccccchhcccccchhhhhhhhhcCC
Confidence               344555543  356777777553

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.66  E-value=2.4e-15  Score=131.21  Aligned_cols=124  Identities=39%  Similarity=0.685  Sum_probs=105.1

Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHH
Q psy3308          91 QSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAAR  170 (838)
Q Consensus        91 ~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~  170 (838)
                      ++..|.|||++|+..|+.+++++|++++...+..+..|.+||+.|+..++.+++++|++.+..++..+..+.||+++|+.
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~   82 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR   82 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence            45678899999999999999999999888777788888899999999999999999999887777788888899999999


Q ss_pred             cCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHH
Q psy3308         171 SGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLI  214 (838)
Q Consensus       171 ~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~  214 (838)
                      .++.+++++|++++.+.+..+..+.++++.|+..++.+++++|+
T Consensus        83 ~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          83 NGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            99999999998888777777777788888888888888887763

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG4214|consensus

Probab=99.59  E-value=5.3e-15  Score=108.08  Aligned_cols=103  Identities=25%  Similarity=0.358  Sum_probs=84.7

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy3308         676 TPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNM  755 (838)
Q Consensus       676 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~  755 (838)
                      ..+.+++++|.++-|+-....|.++|..- .|++|||+|+-.|.++++++|+..|++++.+|.+|-|||..|+-.||.+|
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c   82 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC   82 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence            34667888888888888888887777654 78888888888888888888888888888888888899888888899999


Q ss_pred             HHHHHHCCCCCccCCCCCCcHHHH
Q psy3308         756 VRYLVENGANVNATTNLGYTPLHQ  779 (838)
Q Consensus       756 v~~Ll~~g~~~~~~~~~g~t~l~~  779 (838)
                      |++|+.+|++-.....+|.+.+..
T Consensus        83 VklLL~~GAdrt~~~PdG~~~~ea  106 (117)
T KOG4214|consen   83 VKLLLQNGADRTIHAPDGTALIEA  106 (117)
T ss_pred             HHHHHHcCcccceeCCCchhHHhh
Confidence            999999888887777777765543

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.46  E-value=1.6e-13  Score=96.87  Aligned_cols=54  Identities=46%  Similarity=0.767  Sum_probs=42.8

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHH
Q psy3308         740 GFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL  793 (838)
Q Consensus       740 g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll  793 (838)
                      |+||||+|+..|+.+++++|+++|+++|..|.+|+||||+|+.+|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            678999999999999999999999999999888999999999999999999886

...

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.46  E-value=7.2e-13  Score=130.16  Aligned_cols=126  Identities=36%  Similarity=0.564  Sum_probs=96.9

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCC-----HHHHHHHHhCCC---CCCCCCCCCCc
Q psy3308         671 SKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDK-----VNVATITMFNGA---EIDPVTKAGFT  742 (838)
Q Consensus       671 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~-----~~i~~~L~~~~~---~~~~~~~~g~t  742 (838)
                      +..+.++++.+...+..+++++|+..|++++.++..|.||||.|+..++     .++++.|++.|+   ..+.++..|.|
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~t  149 (235)
T COG0666          70 DLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNT  149 (235)
T ss_pred             CccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCc
Confidence            3345566666666666666666666666666666666777777776666     777777777777   45556888888


Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCC
Q psy3308         743 PLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG  796 (838)
Q Consensus       743 ~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g  796 (838)
                      |||+|+..|+.+++++|++.|++++..+..|.||++.|+..++.+++++|++.+
T Consensus       150 pl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         150 PLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             hhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            888888888888888888888888888888888888888888888888888876

>KOG1710|consensus

Probab=99.46  E-value=4.5e-13  Score=120.77  Aligned_cols=116  Identities=20%  Similarity=0.326  Sum_probs=55.7

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHH
Q psy3308         676 TPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDP-VTKAGFTPLHIASHFGQLN  754 (838)
Q Consensus       676 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~-~~~~g~t~l~~A~~~g~~~  754 (838)
                      .+|..++..|..+-..-|++---++|.+|..|+++|.+|+.+|+.++++.|++.|+|+|- ++..+.||||+|+..|+.+
T Consensus        14 ~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~d   93 (396)
T KOG1710|consen   14 SPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQD   93 (396)
T ss_pred             hHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCch
Confidence            344444444444444444443333444444444555555555555555555555544442 3344455555555555555


Q ss_pred             HHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHH
Q psy3308         755 MVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDL  791 (838)
Q Consensus       755 ~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~  791 (838)
                      +.++|++.|+.+...+.-|+||-..|+.-|+.++|..
T Consensus        94 vcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~i  130 (396)
T KOG1710|consen   94 VCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAI  130 (396)
T ss_pred             HHHHHHhccCccccccchhhhHHHHHHHhcchHHHHH
Confidence            5555555555555555555555555555555444443

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.41  E-value=2.4e-13  Score=96.10  Aligned_cols=55  Identities=44%  Similarity=0.681  Sum_probs=23.5

Q ss_pred             HHhCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHH
Q psy3308         726 TMFNG-AEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQA  780 (838)
Q Consensus       726 L~~~~-~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A  780 (838)
                      |+++| .+++.+|..|+||||+|+..|+.++|++|++.|++++.+|..|+|||++|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            34445 56666666666666666666666666666666666666666666666665

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.39  E-value=9e-13  Score=92.96  Aligned_cols=52  Identities=37%  Similarity=0.528  Sum_probs=23.6

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHH
Q psy3308          96 FTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELL  147 (838)
Q Consensus        96 ~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L  147 (838)
                      +||||+||..|+.+++++|+++|.+++.+|.+|.||||+|+.+|+++++++|
T Consensus         2 ~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~L   53 (54)
T PF13637_consen    2 RTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFL   53 (54)
T ss_dssp             SBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred             ChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence            4455555555555555555555555555555555555555555555555554

...

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.39  E-value=4.4e-12  Score=124.54  Aligned_cols=128  Identities=31%  Similarity=0.524  Sum_probs=103.7

Q ss_pred             cCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCC-----HHHHHHHHHcCC---CCccccCCC
Q psy3308          90 VQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGK-----VAMVELLISKGA---NIEAKTRDG  161 (838)
Q Consensus        90 ~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~-----~~iv~~L~~~~~---~~~~~~~~~  161 (838)
                      ..+..+.++++.|+..+..+++++++..+.+++..+..|.||||+|+.+|+     .+++++|++.|+   ..+.++..|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g  147 (235)
T COG0666          68 ARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDG  147 (235)
T ss_pred             cCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCC
Confidence            445567788888888888888888888888888888888888888888888     888888888888   555568888


Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCC
Q psy3308         162 LTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHG  217 (838)
Q Consensus       162 ~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~  217 (838)
                      .||||+|+..|+.++++.|++.|++.+..+..|.|+++.|+..++.++++.+...+
T Consensus       148 ~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         148 NTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            88888888888888888888888887777777888888888888888888777754

>KOG0515|consensus

Probab=99.38  E-value=1.3e-12  Score=127.77  Aligned_cols=116  Identities=27%  Similarity=0.331  Sum_probs=81.6

Q ss_pred             HHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy3308         679 HLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY  758 (838)
Q Consensus       679 ~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~  758 (838)
                      .-|+..|-+|+|+-.+..--|+...+..|.|+||.|+..||.+||+||++.|+++|..|.+||||||+|+.++++.|++.
T Consensus       555 LDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckq  634 (752)
T KOG0515|consen  555 LDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQ  634 (752)
T ss_pred             HhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHH
Confidence            34666777777777776666666667777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHCCCCCccCCC-CCCcHHHHHH--HhCcHHHHHHHHh
Q psy3308         759 LVENGANVNATTN-LGYTPLHQAS--QQGRVLIIDLLLG  794 (838)
Q Consensus       759 Ll~~g~~~~~~~~-~g~t~l~~A~--~~~~~~~v~~Ll~  794 (838)
                      |++.|+-+-..+. ++.||..---  +.|..+|.+||..
T Consensus       635 LVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  635 LVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            7777776655443 4566654332  3467777777763

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.38  E-value=2.1e-12  Score=143.06  Aligned_cols=99  Identities=30%  Similarity=0.309  Sum_probs=76.0

Q ss_pred             HhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHH
Q psy3308         710 PLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLII  789 (838)
Q Consensus       710 ~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v  789 (838)
                      .|+.|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv  164 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVV  164 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHH
Confidence            46777777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHhC-------CCCCCCCCCccch
Q psy3308         790 DLLLGA-------GAQPNATTNLFCC  808 (838)
Q Consensus       790 ~~Ll~~-------ga~~~~~~~~~~~  808 (838)
                      ++|+++       |++++..+..|.+
T Consensus       165 ~~Ll~~~~~~~~~ga~~~~~~~~g~~  190 (664)
T PTZ00322        165 QLLSRHSQCHFELGANAKPDSFTGKP  190 (664)
T ss_pred             HHHHhCCCcccccCCCCCccccCCCC
Confidence            777777       7777777777766

>KOG1710|consensus

Probab=99.36  E-value=4.8e-12  Score=114.22  Aligned_cols=119  Identities=26%  Similarity=0.308  Sum_probs=101.6

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCcH
Q psy3308         609 VTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE-SKAGFTPLHLSAQEGHT  687 (838)
Q Consensus       609 ~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~-~~~g~t~L~~A~~~g~~  687 (838)
                      ..||.-++..|..+-...|++.--.+|..|..|.++|..|+.+|++++|+.|++.|+|+|.. +..+.||||+|+.+|+.
T Consensus        13 ~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~   92 (396)
T KOG1710|consen   13 KSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQ   92 (396)
T ss_pred             hhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCc
Confidence            46888888888888888888876668888888999999999999999999999999988865 34567899999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHH
Q psy3308         688 DMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM  727 (838)
Q Consensus       688 ~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~  727 (838)
                      ++.++|++.|+.....+.-|+|+-..||.-|+.++|.++-
T Consensus        93 dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iIN  132 (396)
T KOG1710|consen   93 DVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIIN  132 (396)
T ss_pred             hHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHh
Confidence            9999999999888888888899999999999988888764

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.33  E-value=1.4e-12  Score=92.15  Aligned_cols=54  Identities=41%  Similarity=0.539  Sum_probs=32.4

Q ss_pred             HHHCC-CCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHH
Q psy3308         759 LVENG-ANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATIL  812 (838)
Q Consensus       759 Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~  812 (838)
                      |+++| ++++..|..|.||||+|+..|+.++|++|+++|+|++.+|..|+| +++|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            67888 899999999999999999999999999999999999999999999 9886

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.32  E-value=7.6e-12  Score=138.73  Aligned_cols=106  Identities=30%  Similarity=0.382  Sum_probs=75.4

Q ss_pred             hHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHH
Q psy3308         643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNV  722 (838)
Q Consensus       643 t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i  722 (838)
                      ..|+.|+..|+.++++.|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i  163 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV  163 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence            45667777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHhC-------CCCCCCCCCCCCcHHHHHH
Q psy3308         723 ATITMFN-------GAEIDPVTKAGFTPLHIAS  748 (838)
Q Consensus       723 ~~~L~~~-------~~~~~~~~~~g~t~l~~A~  748 (838)
                      +++|+.+       |++++..+..|.+|+..+.
T Consensus       164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            7777766       6666666666666655443

>KOG0515|consensus

Probab=99.30  E-value=8.7e-12  Score=122.18  Aligned_cols=91  Identities=35%  Similarity=0.508  Sum_probs=70.7

Q ss_pred             HHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCCHHHHH
Q psy3308          99 LYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVID  178 (838)
Q Consensus        99 l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~iv~  178 (838)
                      |.-|+..|-+|+|+-.+..-.++...+..|.|+||.|+..||.+||+||+++|+++|..|.+|+||||.||..++..+++
T Consensus       554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ck  633 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCK  633 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHH
Confidence            44577778888888877777777777777888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHcCCCccC
Q psy3308         179 ILIEKGAALYS  189 (838)
Q Consensus       179 ~L~~~~~~~~~  189 (838)
                      .|++.|+-+..
T Consensus       634 qLVe~GaavfA  644 (752)
T KOG0515|consen  634 QLVESGAAVFA  644 (752)
T ss_pred             HHHhccceEEe
Confidence            88887776543

>PF13606 Ank_3: Ankyrin repeat

Probab=98.88  E-value=2.7e-09  Score=63.28  Aligned_cols=29  Identities=45%  Similarity=0.669  Sum_probs=20.9

Q ss_pred             CCCcHHHHHHHhCcHHHHHHHHhCCCCCC
Q psy3308         772 LGYTPLHQASQQGRVLIIDLLLGAGAQPN  800 (838)
Q Consensus       772 ~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~  800 (838)
                      +|+||||+|++.|++++|++|+++|+|+|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            36777777777777777777777777766

>KOG0783|consensus

Probab=98.86  E-value=1.3e-09  Score=113.19  Aligned_cols=81  Identities=27%  Similarity=0.355  Sum_probs=55.2

Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCC-CCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHH
Q psy3308         734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNL-GYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATI  811 (838)
Q Consensus       734 ~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~  811 (838)
                      |..|..|+|+||.|+..+..++++||+++|++++.+|.+ |+||||-|+..|+++|+-+|+++|+...++|.+|.+ ++.
T Consensus        46 nikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~  125 (1267)
T KOG0783|consen   46 NIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQF  125 (1267)
T ss_pred             hHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHH
Confidence            456666677777777666667777777777777666653 667777777777777777777777777777777766 666


Q ss_pred             HHH
Q psy3308         812 LVK  814 (838)
Q Consensus       812 ~~~  814 (838)
                      ..+
T Consensus       126 ~~r  128 (1267)
T KOG0783|consen  126 LSR  128 (1267)
T ss_pred             Hhh
Confidence            555

>KOG0506|consensus

Probab=98.85  E-value=2.9e-09  Score=103.53  Aligned_cols=94  Identities=18%  Similarity=0.310  Sum_probs=84.1

Q ss_pred             CCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCccCCCCCCcHHHHHHH
Q psy3308         704 AKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN-GANVNATTNLGYTPLHQASQ  782 (838)
Q Consensus       704 ~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~  782 (838)
                      +..+...+++|+..|.+..++.+.-.|.++...|.+.+|+||.|+..|+.++++||++. +.+++.+|.+|+|||.-|..
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~  582 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH  582 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence            34566688999999999999988888999999999999999999999999999999997 88999999999999999999


Q ss_pred             hCcHHHHHHHHhCCC
Q psy3308         783 QGRVLIIDLLLGAGA  797 (838)
Q Consensus       783 ~~~~~~v~~Ll~~ga  797 (838)
                      .+|.+++++|-+.-.
T Consensus       583 F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  583 FKHKEVVKLLEEAQY  597 (622)
T ss_pred             cCcHHHHHHHHHHhc
Confidence            999999999988644

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.82  E-value=6.2e-09  Score=64.13  Aligned_cols=33  Identities=52%  Similarity=0.642  Sum_probs=22.9

Q ss_pred             CCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCC
Q psy3308         772 LGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN  804 (838)
Q Consensus       772 ~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~  804 (838)
                      +|+||||+|++.|+.+++++|+++|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            366777777777777777777777777776653

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>PF13606 Ank_3: Ankyrin repeat

Probab=98.76  E-value=1.1e-08  Score=60.70  Aligned_cols=30  Identities=53%  Similarity=0.945  Sum_probs=25.7

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHCCCCCcc
Q psy3308         739 AGFTPLHIASHFGQLNMVRYLVENGANVNA  768 (838)
Q Consensus       739 ~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~  768 (838)
                      +|+||||+|+..|+.++|++|+++|+|+|.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            478899999999999999999999888863

>KOG0782|consensus

Probab=98.72  E-value=3.5e-08  Score=98.15  Aligned_cols=117  Identities=22%  Similarity=0.291  Sum_probs=75.3

Q ss_pred             HHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCC--CccccCCCCcHHHHHHHcCCHHH
Q psy3308          99 LYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN--IEAKTRDGLTPLHCAARSGHDNV  176 (838)
Q Consensus        99 l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~--~~~~~~~~~tal~~A~~~g~~~i  176 (838)
                      +..|+..+.+=-++-+...|...-+.+.+..+.||+|++.|+-|||+|++++|..  .+..+..|.|+||.|+..++..+
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v  949 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV  949 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence            5556666655444444555555555566666677777777777777777776643  23445666777777777777777


Q ss_pred             HHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHh
Q psy3308         177 IDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIY  215 (838)
Q Consensus       177 v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~  215 (838)
                      .++|++.|+.+...|..|.||-.-|-+.|..++..||-.
T Consensus       950 c~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~  988 (1004)
T KOG0782|consen  950 CQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLES  988 (1004)
T ss_pred             HHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhh
Confidence            777777777766666677777777777777777766643

>KOG0783|consensus

Probab=98.69  E-value=1e-08  Score=106.84  Aligned_cols=83  Identities=27%  Similarity=0.449  Sum_probs=68.3

Q ss_pred             CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q psy3308         667 PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA-KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLH  745 (838)
Q Consensus       667 ~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~  745 (838)
                      .|++|..|+|+||.|+..+..++++||+++|++++.+| +.|+||||.|+..|+++++-.|+.+|..+..+|..|.+||.
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq  124 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ  124 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence            47778888888888888888888888888888888776 46888888888888888888888888888888888888888


Q ss_pred             HHHH
Q psy3308         746 IASH  749 (838)
Q Consensus       746 ~A~~  749 (838)
                      ..++
T Consensus       125 ~~~r  128 (1267)
T KOG0783|consen  125 FLSR  128 (1267)
T ss_pred             HHhh
Confidence            6655

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.69  E-value=3.1e-08  Score=61.03  Aligned_cols=33  Identities=42%  Similarity=0.734  Sum_probs=29.2

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCC
Q psy3308         739 AGFTPLHIASHFGQLNMVRYLVENGANVNATTN  771 (838)
Q Consensus       739 ~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~  771 (838)
                      +|+||||+|+..|+.+++++|+++|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            488999999999999999999999999988764

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0782|consensus

Probab=98.68  E-value=5.9e-08  Score=96.56  Aligned_cols=117  Identities=21%  Similarity=0.227  Sum_probs=102.1

Q ss_pred             HHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHcCCHHH
Q psy3308         678 LHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAE--IDPVTKAGFTPLHIASHFGQLNM  755 (838)
Q Consensus       678 L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~--~~~~~~~g~t~l~~A~~~g~~~~  755 (838)
                      +..|+..+.+--++-+..+|.+.-.++....+.||+|+..|+-++|+|++++|..  +++.|..|.|+||.|+..++..+
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v  949 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV  949 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence            4566667766666667778888888888889999999999999999999999864  56788899999999999999999


Q ss_pred             HHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHh
Q psy3308         756 VRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG  794 (838)
Q Consensus       756 v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~  794 (838)
                      +++|++.|+.+-..|..|.||-.-|-+.|.+++.-||-.
T Consensus       950 c~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~  988 (1004)
T KOG0782|consen  950 CQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLES  988 (1004)
T ss_pred             HHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhh
Confidence            999999999999999999999999999999999988754

>KOG0818|consensus

Probab=98.60  E-value=1.8e-07  Score=91.79  Aligned_cols=84  Identities=27%  Similarity=0.375  Sum_probs=51.7

Q ss_pred             hHHHHhcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHH
Q psy3308         711 LHLCAQEDKVNVATITMFNGAEIDPVT-KAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLII  789 (838)
Q Consensus       711 l~~A~~~g~~~i~~~L~~~~~~~~~~~-~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v  789 (838)
                      ||..++.|+.+..-.|+..|+++|..+ ..|.||||.|++.|+..-+++|+-+|||++..|..|.||+.+|-+.||-++.
T Consensus       137 LhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~la  216 (669)
T KOG0818|consen  137 LHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELA  216 (669)
T ss_pred             HHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHH
Confidence            555556666665555555666665543 3466666666666666666666666666666666666666666666665555


Q ss_pred             HHHHh
Q psy3308         790 DLLLG  794 (838)
Q Consensus       790 ~~Ll~  794 (838)
                      +.|++
T Consensus       217 eRl~e  221 (669)
T KOG0818|consen  217 ERLVE  221 (669)
T ss_pred             HHHHH
Confidence            55543

>KOG0506|consensus

Probab=98.59  E-value=5.6e-08  Score=94.83  Aligned_cols=91  Identities=24%  Similarity=0.334  Sum_probs=83.3

Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHc
Q psy3308         672 KAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN-GAEIDPVTKAGFTPLHIASHF  750 (838)
Q Consensus       672 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~-~~~~~~~~~~g~t~l~~A~~~  750 (838)
                      .++...+++|+..|.+..++-+.-.|.+++..|.+.+|+||.||-.|+++++++|++. +.+++.+|.+|+|||.-|...
T Consensus       504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F  583 (622)
T KOG0506|consen  504 NDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF  583 (622)
T ss_pred             ccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence            3456788999999999999999889999999999999999999999999999999976 788889999999999999999


Q ss_pred             CCHHHHHHHHHC
Q psy3308         751 GQLNMVRYLVEN  762 (838)
Q Consensus       751 g~~~~v~~Ll~~  762 (838)
                      +|.+++++|-+.
T Consensus       584 ~h~~v~k~L~~~  595 (622)
T KOG0506|consen  584 KHKEVVKLLEEA  595 (622)
T ss_pred             CcHHHHHHHHHH
Confidence            999999999886

>KOG0818|consensus

Probab=98.41  E-value=1.2e-06  Score=86.22  Aligned_cols=85  Identities=32%  Similarity=0.443  Sum_probs=73.1

Q ss_pred             HHHHHHcCcHHHHHHHHHCCCCCCcccc-CCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCCHHHH
Q psy3308          99 LYMAAQENHDGVVRYLLSKGGNQTLATE-HNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI  177 (838)
Q Consensus        99 l~~A~~~g~~~~v~~L~~~~~~~~~~~~-~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~iv  177 (838)
                      ||..++.|+++..--|+..|+++|.... .|.||||.||+.|+.--+++|+-+|+++...|..|.||+.+|=.+||-++.
T Consensus       137 LhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~la  216 (669)
T KOG0818|consen  137 LHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELA  216 (669)
T ss_pred             HHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHH
Confidence            8888899999988888888888777653 588899999999999889999999999998999999999999999998888


Q ss_pred             HHHHHc
Q psy3308         178 DILIEK  183 (838)
Q Consensus       178 ~~L~~~  183 (838)
                      +-|++.
T Consensus       217 eRl~e~  222 (669)
T KOG0818|consen  217 ERLVEI  222 (669)
T ss_pred             HHHHHH
Confidence            877764

>KOG3609|consensus

Probab=98.34  E-value=2.6e-06  Score=90.74  Aligned_cols=82  Identities=16%  Similarity=0.258  Sum_probs=56.6

Q ss_pred             ChHHHHHHHcCcHHHHHHHHhCC----CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhc
Q psy3308         642 YTPLHIAAKKNQMDIATTLLEYN----AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQE  717 (838)
Q Consensus       642 ~t~L~~A~~~~~~~iv~~Ll~~~----~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~  717 (838)
                      ..-...|++.|+.-.|+..++..    .++|..|.-|+++|+.|+.+.+.+++++|++++..+       ..+|.+|+..
T Consensus        26 e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~   98 (822)
T KOG3609|consen   26 EKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAV   98 (822)
T ss_pred             hHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHH
Confidence            34455677777777777776632    346667777777777777777777777777765433       4477777777


Q ss_pred             CCHHHHHHHHhCC
Q psy3308         718 DKVNVATITMFNG  730 (838)
Q Consensus       718 g~~~i~~~L~~~~  730 (838)
                      |..++|++++.+.
T Consensus        99 ~~v~~VE~ll~~~  111 (822)
T KOG3609|consen   99 GSVPLVELLLVHF  111 (822)
T ss_pred             HHHHHHHHHHhcc
Confidence            7777777777653

>KOG0705|consensus

Probab=98.31  E-value=1.7e-06  Score=86.94  Aligned_cols=90  Identities=27%  Similarity=0.366  Sum_probs=73.8

Q ss_pred             HhHHHHhcCCHHHHHHHHhCCCC--CCC--CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCc
Q psy3308         710 PLHLCAQEDKVNVATITMFNGAE--IDP--VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGR  785 (838)
Q Consensus       710 ~l~~A~~~g~~~i~~~L~~~~~~--~~~--~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~  785 (838)
                      -|..|+....+..+-+|+.+|..  +|.  .+..|+||||.|+..|++.+.++|+=+|+|+-.+|..|+|||.||-+.|.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence            35566666666677777777643  332  35668899999999999999999998999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCC
Q psy3308         786 VLIIDLLLGAGAQP  799 (838)
Q Consensus       786 ~~~v~~Ll~~ga~~  799 (838)
                      -+|+++|+++|.-.
T Consensus       707 qec~d~llq~gcp~  720 (749)
T KOG0705|consen  707 QECIDVLLQYGCPD  720 (749)
T ss_pred             HHHHHHHHHcCCCc
Confidence            99999999998844

>KOG2384|consensus

Probab=98.31  E-value=1.7e-06  Score=74.05  Aligned_cols=65  Identities=25%  Similarity=0.311  Sum_probs=51.2

Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCccCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         731 AEIDPVTKAGFTPLHIASHFGQLNMVRYLVENG-ANVNATTNLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       731 ~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      .++|.+|..|+||+|.|+..|..+.|.||+++| +.+...|..|.+++.+|-+.|+.++|+.|.++
T Consensus         3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence            456777788888888888888888888888887 77777777788888888888888888877776

>KOG2384|consensus

Probab=98.29  E-value=1.6e-06  Score=74.25  Aligned_cols=70  Identities=29%  Similarity=0.386  Sum_probs=55.8

Q ss_pred             CCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy3308          85 GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKG-GNQTLATEHNITPLHVACKWGKVAMVELLISKGANI  154 (838)
Q Consensus        85 ~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~-~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~  154 (838)
                      +.++|.+|..|||+++.|+..|+.+.|.||+.+| +.+...|..|.+++.+|-+.|+.++|..|.++..+.
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et   72 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET   72 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence            3467888888888888888888888888888888 667777888888888888888888888888765443

>KOG0511|consensus

Probab=98.28  E-value=2.7e-06  Score=80.93  Aligned_cols=67  Identities=24%  Similarity=0.243  Sum_probs=41.5

Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q psy3308         677 PLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTP  743 (838)
Q Consensus       677 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~  743 (838)
                      -|..|++.|..+.|++|++.|.++|..|.....||.+|+-.||.+++++|+++|+-+..-...|...
T Consensus        39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC  105 (516)
T KOG0511|consen   39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC  105 (516)
T ss_pred             HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh
Confidence            4556666666666666666666666666666666666666666666666666666554444444443

>KOG0522|consensus

Probab=98.27  E-value=2.3e-06  Score=85.68  Aligned_cols=64  Identities=38%  Similarity=0.600  Sum_probs=37.2

Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHh
Q psy3308         731 AEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG  794 (838)
Q Consensus       731 ~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~  794 (838)
                      ..++..|..|+||||.|+..||.+.++.|+.+|+++..+++.|++|||.|+..|+..++.-++.
T Consensus        46 ~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr  109 (560)
T KOG0522|consen   46 LVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLR  109 (560)
T ss_pred             ceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHH
Confidence            3445555555666666666666666666666666666666666666666666665555544443

>KOG3609|consensus

Probab=98.21  E-value=5.1e-06  Score=88.65  Aligned_cols=121  Identities=20%  Similarity=0.263  Sum_probs=100.4

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCC----CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHH
Q psy3308         575 GFTPLHLAAKYGRMKIAQMLLQKD----APVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAK  650 (838)
Q Consensus       575 ~~~~l~~a~~~~~~~~v~~Ll~~~----~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~  650 (838)
                      +..-+..|++.|+...|+..++..    .++|-+|.-|.++|++|+.+.+.+++++|++++...       ..+|-.|+.
T Consensus        25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~   97 (822)
T KOG3609|consen   25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIA   97 (822)
T ss_pred             hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHH
Confidence            345677899999999999888752    567888999999999999999999999999986554       479999999


Q ss_pred             cCcHHHHHHHHhCCCCC----------CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy3308         651 KNQMDIATTLLEYNAKP----------NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSH  702 (838)
Q Consensus       651 ~~~~~iv~~Ll~~~~~~----------~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~  702 (838)
                      .|...+|+.++.+....          .....-+.|||..|+..+++||++.|+.+|+.+..
T Consensus        98 ~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~  159 (822)
T KOG3609|consen   98 VGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI  159 (822)
T ss_pred             HHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence            99999999999864332          12233457999999999999999999999987643

>KOG0705|consensus

Probab=98.17  E-value=5.9e-06  Score=83.19  Aligned_cols=89  Identities=27%  Similarity=0.367  Sum_probs=48.8

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCC--Ccc--ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCc
Q psy3308         131 PLHVACKWGKVAMVELLISKGAN--IEA--KTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDH  206 (838)
Q Consensus       131 ~l~~Aa~~g~~~iv~~L~~~~~~--~~~--~~~~~~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~  206 (838)
                      -|..|+...++..+-+|+-+|..  ++.  .+.+|+||||+||+.|+..+.++|+=+|+++-..|..|+|+|.||-+.|.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence            34455555555555555555532  111  23344556666666666666666555555555555556666666666666


Q ss_pred             HHHHHHHHhCCCC
Q psy3308         207 EAATRVLIYHGAG  219 (838)
Q Consensus       207 ~~~v~~L~~~~~~  219 (838)
                      -+++..|+++|..
T Consensus       707 qec~d~llq~gcp  719 (749)
T KOG0705|consen  707 QECIDVLLQYGCP  719 (749)
T ss_pred             HHHHHHHHHcCCC
Confidence            6666666665543

>KOG0511|consensus

Probab=98.17  E-value=4.7e-06  Score=79.35  Aligned_cols=67  Identities=30%  Similarity=0.356  Sum_probs=52.4

Q ss_pred             HHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHH
Q psy3308          99 LYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPL  165 (838)
Q Consensus        99 l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal  165 (838)
                      |..||+.|.+|.|++|++.|.++|..|..-.+||.+|+-.||.++|++|+++|+-.....-+|..++
T Consensus        40 lceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~  106 (516)
T KOG0511|consen   40 LCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCH  106 (516)
T ss_pred             HHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhh
Confidence            7788888888888888888888888888888888888888888888888888875544444555443

>KOG0521|consensus

Probab=98.00  E-value=4.5e-06  Score=92.24  Aligned_cols=113  Identities=24%  Similarity=0.298  Sum_probs=92.0

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy3308         673 AGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQ  752 (838)
Q Consensus       673 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~  752 (838)
                      .+.+++..|...-+..++.|..        .-..|.++||.|+..|..-++++|+.+|+++|..|..|+||+|.+...|+
T Consensus       630 ~~~~~~~~~~~~~~~~~~n~~~--------~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~  701 (785)
T KOG0521|consen  630 DGECLPRIATALAHGCCENWPV--------VLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGH  701 (785)
T ss_pred             Cccchhhhhhhhcchhhhccch--------hhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcc
Confidence            3445555555555444444432        23467899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHH
Q psy3308         753 LNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL  793 (838)
Q Consensus       753 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll  793 (838)
                      ...+..|+++|++++..+.+|.+||.+|....+-+++-+|.
T Consensus       702 ~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~~d~~~l~~  742 (785)
T KOG0521|consen  702 TSIACLLLKRGADPNAFDPDGKLPLDIAMEAANADIVLLLR  742 (785)
T ss_pred             cchhhhhccccccccccCccCcchhhHHhhhccccHHHHHh
Confidence            99999999999999999999999999998777766665554

>KOG0522|consensus

Probab=97.89  E-value=3.3e-05  Score=77.65  Aligned_cols=86  Identities=28%  Similarity=0.407  Sum_probs=64.0

Q ss_pred             hHHHHHHHcCcHHHHHHHHh--CCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCH
Q psy3308         643 TPLHIAAKKNQMDIATTLLE--YNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKV  720 (838)
Q Consensus       643 t~L~~A~~~~~~~iv~~Ll~--~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~  720 (838)
                      .|+|.++.....+-+..++.  ....++.+|..|.||||.|+.-|+.+.++.|+.+|+++..+++.|+++||.|+..|+.
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~  101 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE  101 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence            35788877776665555333  3445677777888888888888888888888888888888888888888888888887


Q ss_pred             HHHHHHHh
Q psy3308         721 NVATITMF  728 (838)
Q Consensus       721 ~i~~~L~~  728 (838)
                      .++..++.
T Consensus       102 q~i~~vlr  109 (560)
T KOG0522|consen  102 QIITEVLR  109 (560)
T ss_pred             HHHHHHHH
Confidence            76665553

>KOG0521|consensus

Probab=97.84  E-value=8.6e-06  Score=90.04  Aligned_cols=87  Identities=39%  Similarity=0.446  Sum_probs=79.0

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHH
Q psy3308         736 VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVK  814 (838)
Q Consensus       736 ~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~  814 (838)
                      +-..|.|+||.|+..|..-++++|+++|+++|..|..|+||+|.+...|+...+..|+++|++++..+.+|.+ +.++.+
T Consensus       652 ~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~  731 (785)
T KOG0521|consen  652 VLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAME  731 (785)
T ss_pred             hhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhh
Confidence            3456899999999999999999999999999999999999999999999999999999999999999999999 999877


Q ss_pred             cCCccCccc
Q psy3308         815 NGAEIDPVT  823 (838)
Q Consensus       815 ~~~~~~~~~  823 (838)
                      . ...|.+.
T Consensus       732 ~-~~~d~~~  739 (785)
T KOG0521|consen  732 A-ANADIVL  739 (785)
T ss_pred             h-ccccHHH
Confidence            6 4445443

>KOG0520|consensus

Probab=97.81  E-value=2.7e-05  Score=85.38  Aligned_cols=126  Identities=26%  Similarity=0.254  Sum_probs=76.4

Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy3308         670 ESKAGFTPLHLSAQEGHTDMSSLLIEH-GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS  748 (838)
Q Consensus       670 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~  748 (838)
                      ....|++.+|.++..++..+++.+++- |......+..|...+|+++..|..-.+....-+|..++.+|..|+||||+|+
T Consensus       570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa  649 (975)
T KOG0520|consen  570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAA  649 (975)
T ss_pred             CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHh
Confidence            344556777777777776666666663 4444445556666666655444333333333346666677777777777777


Q ss_pred             HcCCHHHHHHHHHCCCCCc------cCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         749 HFGQLNMVRYLVENGANVN------ATTNLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       749 ~~g~~~~v~~Ll~~g~~~~------~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      .+|+..++.-|++-|++.+      ..+..|.|+-..|..+|+..+.-+|-++
T Consensus       650 ~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  650 FRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             hcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            7777777777776654432      2333467777777777776666666554

>KOG0520|consensus

Probab=97.78  E-value=2e-05  Score=86.28  Aligned_cols=123  Identities=22%  Similarity=0.208  Sum_probs=99.1

Q ss_pred             CCCCCCCCcHhHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH-CCCCCccCCCCCCcHHH
Q psy3308         701 SHQAKNGLTPLHLCAQEDKVNVATITMFN-GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE-NGANVNATTNLGYTPLH  778 (838)
Q Consensus       701 ~~~~~~~~t~l~~A~~~g~~~i~~~L~~~-~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~l~  778 (838)
                      ......|++.+|+++..++..+++.+++. +......|..|...+|+++ .++.+++.+|+. +|..++.+|..|+||||
T Consensus       568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca-~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~  646 (975)
T KOG0520|consen  568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCA-ALGYEWAFLPISADGVAIDIRDRNGWTPLH  646 (975)
T ss_pred             ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhh-hcCCceeEEEEeecccccccccCCCCcccc
Confidence            44556789999999999999999999886 6666677778888888844 456677766665 48899999999999999


Q ss_pred             HHHHhCcHHHHHHHHhCCCCCCCC------CCccch-HHHHHHcCCccCccccc
Q psy3308         779 QASQQGRVLIIDLLLGAGAQPNAT------TNLFCC-ATILVKNGAEIDPVTKL  825 (838)
Q Consensus       779 ~A~~~~~~~~v~~Ll~~ga~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~  825 (838)
                      +|+..|+..++.-|.+-|+++...      +-.|.| .+++..+|++ .+--.|
T Consensus       647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~-gia~~l  699 (975)
T KOG0520|consen  647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHK-GIAGYL  699 (975)
T ss_pred             hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhccccc-chHHHH
Confidence            999999999999999888877553      346888 9999988885 444443

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=97.20  E-value=0.0025  Score=55.31  Aligned_cols=139  Identities=15%  Similarity=0.107  Sum_probs=98.1

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCCHH
Q psy3308          96 FTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDN  175 (838)
Q Consensus        96 ~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~  175 (838)
                      +-.|..|++.+-+.|+++.-+...+.   -....+.+..||+..+.|||+|.-++   .  .-.+-.+-+..|....+++
T Consensus        47 ~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~qn---L--~i~~~~~iFdIA~~~kDls  118 (192)
T PF03158_consen   47 WCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQN---L--HIYNPEDIFDIAFAKKDLS  118 (192)
T ss_pred             HHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhhc---c--CCCCchhhhhhhhhccchh
Confidence            34577899999999999987763321   13456789999999999999999543   1  2233455688999999888


Q ss_pred             HHH----HHHHcCCCccCC--CCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHHH
Q psy3308         176 VID----ILIEKGAALYSK--TKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLD  248 (838)
Q Consensus       176 iv~----~L~~~~~~~~~~--~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~~  248 (838)
                      +..    ++.++..+....  +.--..-|.+|+..|-+.-+.-.+++|-+++.      ++|..|+.+.|..|+.+++.
T Consensus       119 LyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  119 LYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence            532    233332211001  11123457889999999999888898866553      69999999999999998864

These proteins may be involved in promoting survival of infected macrophages [].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=97.13  E-value=0.0043  Score=53.95  Aligned_cols=137  Identities=13%  Similarity=0.111  Sum_probs=70.8

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHH
Q psy3308         610 TPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDM  689 (838)
Q Consensus       610 ~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~i  689 (838)
                      -.+..|+..+...|+++.-+...+.   -...++.+..|++..+.|+|+|+-+     +..-....+.+..|....+.++
T Consensus        48 CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~q-----nL~i~~~~~iFdIA~~~kDlsL  119 (192)
T PF03158_consen   48 CLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQ-----NLHIYNPEDIFDIAFAKKDLSL  119 (192)
T ss_pred             HHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhh-----ccCCCCchhhhhhhhhccchhH
Confidence            3566677777777777665542211   1234567777888888888888854     2222233456677777777665


Q ss_pred             HH----HHHhCCCCCCCCC--CCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy3308         690 SS----LLIEHGATVSHQA--KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLV  760 (838)
Q Consensus       690 v~----~Ll~~g~~~~~~~--~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll  760 (838)
                      ..    ++.++.......+  .--..-|..|+.+|-+..+.-.+++|-.++.      ++|..|+..+|..|+.+++
T Consensus       120 yslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi  190 (192)
T PF03158_consen  120 YSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFI  190 (192)
T ss_pred             HHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhh
Confidence            32    1222211100000  0001234555555555555555555444321      4555555555555555554

These proteins may be involved in promoting survival of infected macrophages [].

>KOG2505|consensus

Probab=96.87  E-value=0.0012  Score=65.99  Aligned_cols=61  Identities=21%  Similarity=0.187  Sum_probs=42.6

Q ss_pred             HHHHHHHhCCCCCCC------CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHH
Q psy3308         721 NVATITMFNGAEIDP------VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQAS  781 (838)
Q Consensus       721 ~i~~~L~~~~~~~~~------~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~  781 (838)
                      +.+++|.+++...|.      .+...-|+||+|+..|..+||.+||+.|+|+..+|..|+||.+++.
T Consensus       405 ~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  405 DSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            455566655554432      3444557888888888888888888888888888888888877776

>smart00248 ANK ankyrin repeats

Probab=96.79  E-value=0.0024  Score=37.63  Aligned_cols=28  Identities=46%  Similarity=0.769  Sum_probs=17.4

Q ss_pred             CCcHHHHHHHhCcHHHHHHHHhCCCCCC
Q psy3308         773 GYTPLHQASQQGRVLIIDLLLGAGAQPN  800 (838)
Q Consensus       773 g~t~l~~A~~~~~~~~v~~Ll~~ga~~~  800 (838)
                      |.||+++|+..++.+++++|+++|.+++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            4566666666666666666666665543

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>smart00248 ANK ankyrin repeats

Probab=96.46  E-value=0.0054  Score=36.00  Aligned_cols=28  Identities=46%  Similarity=0.885  Sum_probs=21.6

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHCCCCCc
Q psy3308         740 GFTPLHIASHFGQLNMVRYLVENGANVN  767 (838)
Q Consensus       740 g~t~l~~A~~~g~~~~v~~Ll~~g~~~~  767 (838)
                      |.||+++|+..++.+++++|+++|.+++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            5678888888888888888888776653

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=96.40  E-value=0.03  Score=50.30  Aligned_cols=46  Identities=30%  Similarity=0.461  Sum_probs=32.4

Q ss_pred             CHHHHHHHHHCC-CCCcc---CCCCCCcHHHHHHHhCcHHHHHHHHhCCC
Q psy3308         752 QLNMVRYLVENG-ANVNA---TTNLGYTPLHQASQQGRVLIIDLLLGAGA  797 (838)
Q Consensus       752 ~~~~v~~Ll~~g-~~~~~---~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga  797 (838)
                      +..++++++++| +++|.   +-+.|.|.|.-|..+++.+++.+|+++||
T Consensus       229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence            356677777776 35554   34557788888888888888888888877

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>KOG2505|consensus

Probab=96.39  E-value=0.0038  Score=62.66  Aligned_cols=62  Identities=23%  Similarity=0.191  Sum_probs=53.5

Q ss_pred             HHHHHHHHHCCCCCcc------CCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHH
Q psy3308         753 LNMVRYLVENGANVNA------TTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVK  814 (838)
Q Consensus       753 ~~~v~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~  814 (838)
                      ...+++|.+++++.|.      .+....|+||+|+..|.-.+|.+||+.|+||.+.|..|.| .+++..
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~n  472 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSAN  472 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCccccccc
Confidence            5778999999877654      3334679999999999999999999999999999999999 888763

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=95.88  E-value=0.031  Score=50.18  Aligned_cols=46  Identities=24%  Similarity=0.359  Sum_probs=35.1

Q ss_pred             cHHHHHHHHHCCC-CCC---ccccCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy3308         107 HDGVVRYLLSKGG-NQT---LATEHNITPLHVACKWGKVAMVELLISKGA  152 (838)
Q Consensus       107 ~~~~v~~L~~~~~-~~~---~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~  152 (838)
                      +..++++++++|- ++|   .....|.|-|.-|.+.++.+++.+|+++|+
T Consensus       229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence            5567888888773 333   245678888999999999999999998887

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional

Probab=94.13  E-value=14  Score=42.70  Aligned_cols=18  Identities=22%  Similarity=0.109  Sum_probs=10.1

Q ss_pred             HhHHHhcCCHHHHHHHHh
Q psy3308          26 LHIAAKKDDCKAAALLLE   43 (838)
Q Consensus        26 l~~Aa~~g~~~~v~~L~~   43 (838)
                      +..-++.|.++-..-+++
T Consensus       165 i~~y~k~g~~~~A~~lf~  182 (697)
T PLN03081        165 LLMHVKCGMLIDARRLFD  182 (697)
T ss_pred             HHHHhcCCCHHHHHHHHh
Confidence            444455666666555554

>PLN03218 maturation of RBCL 1; Provisional

Probab=93.46  E-value=3.1  Score=49.65  Aligned_cols=361  Identities=13%  Similarity=0.090  Sum_probs=185.9

Q ss_pred             CCchHHHHHHHhhcCC-CCCCCCcHHh------HHHhcCCHHHHHHHHhccccccchhhcccCcchhhhccchhhhhcCc
Q psy3308           2 QQGHDRVVAVLLENDT-KGKVKLPALH------IAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQ   74 (838)
Q Consensus         2 ~~g~~~iv~~l~~~~~-~~~~~~~al~------~Aa~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   74 (838)
                      +.|+++-..-+++... .+...++.+.      ..++.|.++-..-+++.-..         .+...+.......+..|.
T Consensus       382 r~G~l~eAl~Lfd~M~~~gvv~~~~v~~~~li~~~~~~g~~~eAl~lf~~M~~---------pd~~Tyn~LL~a~~k~g~  452 (1060)
T PLN03218        382 RDGRIKDCIDLLEDMEKRGLLDMDKIYHAKFFKACKKQRAVKEAFRFAKLIRN---------PTLSTFNMLMSVCASSQD  452 (1060)
T ss_pred             HCcCHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHCCCHHHHHHHHHHcCC---------CCHHHHHHHHHHHHhCcC
Confidence            3466555555555432 2332333332      24566777665555541100         111222222333466677


Q ss_pred             HHHHH----HHHHCCCCcccCCCCCCcHHHHHHHcCcHHHHHHHH----HCCCCCCccccCCCcHHHHHHHcCCHH----
Q psy3308          75 EEVAK----ILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLL----SKGGNQTLATEHNITPLHVACKWGKVA----  142 (838)
Q Consensus        75 ~~~v~----~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~----~~~~~~~~~~~~~~~~l~~Aa~~g~~~----  142 (838)
                      .+.+.    .+.+.|..++..  ...+.+...++.|.++.+.-++    +.|..++...  ..+.+...++.|+++    
T Consensus       453 ~e~A~~lf~~M~~~Gl~pD~~--tynsLI~~y~k~G~vd~A~~vf~eM~~~Gv~PdvvT--ynaLI~gy~k~G~~eeAl~  528 (1060)
T PLN03218        453 IDGALRVLRLVQEAGLKADCK--LYTTLISTCAKSGKVDAMFEVFHEMVNAGVEANVHT--FGALIDGCARAGQVAKAFG  528 (1060)
T ss_pred             HHHHHHHHHHHHHcCCCCCHH--HHHHHHHHHHhCcCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHHCcCHHHHHH
Confidence            65554    444556655432  2346677778899987555544    4555555322  234455567888865    


Q ss_pred             HHHHHHHcCCCCccccCCCCcHHHHHHHcCCHHHHHHHHH----cCCCccCCCCCC-ccHHHHHHhCCcHHHHHHH----
Q psy3308         143 MVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIE----KGAALYSKTKNG-LAPLHMASQGDHEAATRVL----  213 (838)
Q Consensus       143 iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~iv~~L~~----~~~~~~~~~~~~-~~~l~~A~~~g~~~~v~~L----  213 (838)
                      +.+.+.+.|..++...  ..+.+...++.|..+-+..+++    .+..+. .+... .+.+...++.|.++-+.-+    
T Consensus       529 lf~~M~~~Gv~PD~vT--YnsLI~a~~k~G~~deA~~lf~eM~~~~~gi~-PD~vTynaLI~ay~k~G~ldeA~elf~~M  605 (1060)
T PLN03218        529 AYGIMRSKNVKPDRVV--FNALISACGQSGAVDRAFDVLAEMKAETHPID-PDHITVGALMKACANAGQVDRAKEVYQMI  605 (1060)
T ss_pred             HHHHHHHcCCCCCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHhcCCCC-CcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence            4455556676654322  2345667778888875544442    111111 12222 3345556778887644444    


Q ss_pred             HhCCCCCCcccCCCccHHHHHHhcCCHHHHHHH----HHCCCCccccccCCCch-HHHHHhhCCccccccChHHHHHHHH
Q psy3308         214 IYHGAGVDEITVDYLTALHVASHCGHVRVAKTL----LDRKADPNARALNGFTP-LHIACKKNRYKSSHCNHVWVAKTLL  288 (838)
Q Consensus       214 ~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L----~~~~~~~~~~~~~~~~~-l~~a~~~~~~~~~~~~~~~i~~~Ll  288 (838)
                      .+.|...+..  ...+.+..-+..|+++-+..+    .+.|..|+..   .++. +...+..|..+    .-.++++.+.
T Consensus       606 ~e~gi~p~~~--tynsLI~ay~k~G~~deAl~lf~eM~~~Gv~PD~~---TynsLI~a~~k~G~~e----eA~~l~~eM~  676 (1060)
T PLN03218        606 HEYNIKGTPE--VYTIAVNSCSQKGDWDFALSIYDDMKKKGVKPDEV---FFSALVDVAGHAGDLD----KAFEILQDAR  676 (1060)
T ss_pred             HHcCCCCChH--HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCCHH---HHHHHHHHHHhCCCHH----HHHHHHHHHH
Confidence            4455443322  223455555678886655444    4556666533   2333 34444555433    2456777888


Q ss_pred             hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH----hCCCCccccCCCCCcHH-HHHHHcCCHHHHHH----HHHcCCC
Q psy3308         289 DRKADPNARALNGFTPLHIACKKNRYKVVELLL----KYGASIAATTESGLTPL-HVASFMGCMNIAIF----LLQAGAA  359 (838)
Q Consensus       289 ~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~----~~~~~~~~~~~~~~~~l-~~A~~~g~~~iv~~----Ll~~~~~  359 (838)
                      +.|..++...  ..+.+...++.|.++....++    +.|..++.   ..++.| ..-++.|..+-..-    +.+.|..
T Consensus       677 k~G~~pd~~t--ynsLI~ay~k~G~~eeA~~lf~eM~~~g~~Pdv---vtyN~LI~gy~k~G~~eeAlelf~eM~~~Gi~  751 (1060)
T PLN03218        677 KQGIKLGTVS--YSSLMGACSNAKNWKKALELYEDIKSIKLRPTV---STMNALITALCEGNQLPKALEVLSEMKRLGLC  751 (1060)
T ss_pred             HcCCCCCHHH--HHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC
Confidence            8888776542  234556667778876554444    34544432   223444 44457777664443    3445666


Q ss_pred             CCCCCCCCCcHHHHHHHcCcHHHHHHHH----HCCCCcc
Q psy3308         360 PDTATVRGETPLHLAARANQTDIVRILL----RNGASVD  394 (838)
Q Consensus       360 ~~~~~~~~~~~l~~A~~~g~~~iv~~Ll----~~g~~~~  394 (838)
                      ++....  .+.+...+..|..+....++    +.|..++
T Consensus       752 Pd~~Ty--~sLL~a~~k~G~le~A~~l~~~M~k~Gi~pd  788 (1060)
T PLN03218        752 PNTITY--SILLVASERKDDADVGLDLLSQAKEDGIKPN  788 (1060)
T ss_pred             CCHHHH--HHHHHHHHHCCCHHHHHHHHHHHHHcCCCCC
Confidence            654332  12344445567766555544    4455444

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=92.83  E-value=0.17  Score=38.29  Aligned_cols=18  Identities=28%  Similarity=0.436  Sum_probs=8.3

Q ss_pred             HHHHHHcCCHHHHHHHHH
Q psy3308         165 LHCAARSGHDNVIDILIE  182 (838)
Q Consensus       165 l~~A~~~g~~~iv~~L~~  182 (838)
                      +..|+..|+.||++.+++
T Consensus        10 l~~Ai~GGN~eII~~c~~   27 (76)
T PF11929_consen   10 LEYAIIGGNFEIINICLK   27 (76)
T ss_pred             HHHHHhCCCHHHHHHHHH
Confidence            444444444444444443

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=92.56  E-value=0.22  Score=37.68  Aligned_cols=48  Identities=17%  Similarity=0.147  Sum_probs=40.7

Q ss_pred             ccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHHHC
Q psy3308         195 LAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR  249 (838)
Q Consensus       195 ~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~~~  249 (838)
                      ...+..|+.+|+.|+++.+++.+ .++      ...+..|+..-+.++++||+++
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence            45789999999999999999764 111      3689999999999999999986

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional

Probab=92.21  E-value=27  Score=40.44  Aligned_cols=276  Identities=11%  Similarity=0.090  Sum_probs=133.7

Q ss_pred             cHHHHHHHcCcHHHHHHHH----HCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcH-HHHHHHc
Q psy3308          97 TPLYMAAQENHDGVVRYLL----SKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTP-LHCAARS  171 (838)
Q Consensus        97 t~l~~A~~~g~~~~v~~L~----~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~ta-l~~A~~~  171 (838)
                      +.+...++.++.+.++.++    ..|..++..  .....+..-++.|.++-..-+.+.-...   +....+. +...++.
T Consensus       128 ~ll~a~~~~~~~~~a~~l~~~m~~~g~~~~~~--~~n~Li~~y~k~g~~~~A~~lf~~m~~~---~~~t~n~li~~~~~~  202 (697)
T PLN03081        128 ALVEACIALKSIRCVKAVYWHVESSGFEPDQY--MMNRVLLMHVKCGMLIDARRLFDEMPER---NLASWGTIIGGLVDA  202 (697)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHhCCCcchH--HHHHHHHHHhcCCCHHHHHHHHhcCCCC---CeeeHHHHHHHHHHC
Confidence            3344444556665444433    345444321  1234455556777777777776654332   2223333 3345666


Q ss_pred             CCHH----HHHHHHHcCCCccCCCCCCccHH-HHHHhCCcHHHHHHH----HhCCCCCCcccCCCccHHHHHHhcCCHHH
Q psy3308         172 GHDN----VIDILIEKGAALYSKTKNGLAPL-HMASQGDHEAATRVL----IYHGAGVDEITVDYLTALHVASHCGHVRV  242 (838)
Q Consensus       172 g~~~----iv~~L~~~~~~~~~~~~~~~~~l-~~A~~~g~~~~v~~L----~~~~~~~~~~~~~~~~~l~~A~~~g~~~i  242 (838)
                      |..+    +.+-+.+.|...   +....+.+ ..++..|..+..+.+    .+.|...+.  ....+.+..-++.|.++-
T Consensus       203 g~~~~A~~lf~~M~~~g~~p---~~~t~~~ll~a~~~~~~~~~~~~l~~~~~~~g~~~d~--~~~n~Li~~y~k~g~~~~  277 (697)
T PLN03081        203 GNYREAFALFREMWEDGSDA---EPRTFVVMLRASAGLGSARAGQQLHCCVLKTGVVGDT--FVSCALIDMYSKCGDIED  277 (697)
T ss_pred             cCHHHHHHHHHHHHHhCCCC---ChhhHHHHHHHHhcCCcHHHHHHHHHHHHHhCCCccc--eeHHHHHHHHHHCCCHHH
Confidence            7654    233333444433   22222333 333445555444443    344543332  122344555667788777


Q ss_pred             HHHHHHCCCCccccccCCCchHHH-HHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH--
Q psy3308         243 AKTLLDRKADPNARALNGFTPLHI-ACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVEL--  319 (838)
Q Consensus       243 v~~L~~~~~~~~~~~~~~~~~l~~-a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~--  319 (838)
                      +..+++.-..   ++...++.+.. .+..|..+    .-.++++.+.+.|..++....  .+.+...+..|.++..+.  
T Consensus       278 A~~vf~~m~~---~~~vt~n~li~~y~~~g~~~----eA~~lf~~M~~~g~~pd~~t~--~~ll~a~~~~g~~~~a~~i~  348 (697)
T PLN03081        278 ARCVFDGMPE---KTTVAWNSMLAGYALHGYSE----EALCLYYEMRDSGVSIDQFTF--SIMIRIFSRLALLEHAKQAH  348 (697)
T ss_pred             HHHHHHhCCC---CChhHHHHHHHHHHhCCCHH----HHHHHHHHHHHcCCCCCHHHH--HHHHHHHHhccchHHHHHHH
Confidence            7777764322   23334444443 33444332    235566666666776654321  233444455566654443  


Q ss_pred             --HHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH-HHcCcH----HHHHHHHHCCCC
Q psy3308         320 --LLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLA-ARANQT----DIVRILLRNGAS  392 (838)
Q Consensus       320 --L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A-~~~g~~----~iv~~Ll~~g~~  392 (838)
                        +.+.|...+...  ..+.+..-++.|+++-...+++.-..+   +...++.|..+ +..|+.    ++++.+.+.|..
T Consensus       349 ~~m~~~g~~~d~~~--~~~Li~~y~k~G~~~~A~~vf~~m~~~---d~~t~n~lI~~y~~~G~~~~A~~lf~~M~~~g~~  423 (697)
T PLN03081        349 AGLIRTGFPLDIVA--NTALVDLYSKWGRMEDARNVFDRMPRK---NLISWNALIAGYGNHGRGTKAVEMFERMIAEGVA  423 (697)
T ss_pred             HHHHHhCCCCCeee--hHHHHHHHHHCCCHHHHHHHHHhCCCC---CeeeHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence              344554433221  223445556778877777777654433   33334454443 445553    344444456666


Q ss_pred             cccc
Q psy3308         393 VDAR  396 (838)
Q Consensus       393 ~~~~  396 (838)
                      ++..
T Consensus       424 Pd~~  427 (697)
T PLN03081        424 PNHV  427 (697)
T ss_pred             CCHH
Confidence            6543

>PLN03218 maturation of RBCL 1; Provisional

Probab=89.37  E-value=7.6  Score=46.51  Aligned_cols=311  Identities=14%  Similarity=0.103  Sum_probs=162.9

Q ss_pred             HHhHHHhcCCHHHHHHHHhccccccchhhcccCcchhhhccchhhhhcCcHHHHH----HHHHCCCCcccCCCCCCcHHH
Q psy3308          25 ALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAK----ILVDNGATINVQSLNGFTPLY  100 (838)
Q Consensus        25 al~~Aa~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~----~l~~~~~~~~~~~~~~~t~l~  100 (838)
                      .+...++.|+++-...+++.     -.+................+++.|..+.+.    ...+.|..++..  ...+.+.
T Consensus       443 LL~a~~k~g~~e~A~~lf~~-----M~~~Gl~pD~~tynsLI~~y~k~G~vd~A~~vf~eM~~~Gv~Pdvv--TynaLI~  515 (1060)
T PLN03218        443 LMSVCASSQDIDGALRVLRL-----VQEAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEANVH--TFGALID  515 (1060)
T ss_pred             HHHHHHhCcCHHHHHHHHHH-----HHHcCCCCCHHHHHHHHHHHHhCcCHHHHHHHHHHHHHcCCCCCHH--HHHHHHH
Confidence            46677888998877777761     011111112222223334456778776554    444456555532  2345566


Q ss_pred             HHHHcCcHHHH----HHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHH------cCCCCccccCCCCcHHHHHHH
Q psy3308         101 MAAQENHDGVV----RYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLIS------KGANIEAKTRDGLTPLHCAAR  170 (838)
Q Consensus       101 ~A~~~g~~~~v----~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~------~~~~~~~~~~~~~tal~~A~~  170 (838)
                      ..++.|+++-+    +.+.+.|..++...  ..+.+...++.|.++-...+++      .|..++.  ....+.+...++
T Consensus       516 gy~k~G~~eeAl~lf~~M~~~Gv~PD~vT--YnsLI~a~~k~G~~deA~~lf~eM~~~~~gi~PD~--vTynaLI~ay~k  591 (1060)
T PLN03218        516 GCARAGQVAKAFGAYGIMRSKNVKPDRVV--FNALISACGQSGAVDRAFDVLAEMKAETHPIDPDH--ITVGALMKACAN  591 (1060)
T ss_pred             HHHHCcCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHhcCCCCCcH--HHHHHHHHHHHH
Confidence            67788888543    33445666655332  2345555678888765554443      2233221  112345667788


Q ss_pred             cCCHHHHHH----HHHcCCCccCCCCCCc-cHHHHHHhCCcHHHHHH----HHhCCCCCCcccCCCccHHHHHHhcCCHH
Q psy3308         171 SGHDNVIDI----LIEKGAALYSKTKNGL-APLHMASQGDHEAATRV----LIYHGAGVDEITVDYLTALHVASHCGHVR  241 (838)
Q Consensus       171 ~g~~~iv~~----L~~~~~~~~~~~~~~~-~~l~~A~~~g~~~~v~~----L~~~~~~~~~~~~~~~~~l~~A~~~g~~~  241 (838)
                      .|+++-+.-    +.+.+...   +...+ +.+...++.|..+-+.-    +.+.|..++...  ..+.+...+..|+.+
T Consensus       592 ~G~ldeA~elf~~M~e~gi~p---~~~tynsLI~ay~k~G~~deAl~lf~eM~~~Gv~PD~~T--ynsLI~a~~k~G~~e  666 (1060)
T PLN03218        592 AGQVDRAKEVYQMIHEYNIKG---TPEVYTIAVNSCSQKGDWDFALSIYDDMKKKGVKPDEVF--FSALVDVAGHAGDLD  666 (1060)
T ss_pred             CCCHHHHHHHHHHHHHcCCCC---ChHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHhCCCHH
Confidence            888774443    44444432   22222 34445567777644333    445666555322  234556667778866


Q ss_pred             HHHHH----HHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH-
Q psy3308         242 VAKTL----LDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKV-  316 (838)
Q Consensus       242 iv~~L----~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~-  316 (838)
                      -+..+    .+.|..++...  ..+.+...++.|..+    .-.++++.+.+.|..++....  .+.+...++.|+++- 
T Consensus       667 eA~~l~~eM~k~G~~pd~~t--ynsLI~ay~k~G~~e----eA~~lf~eM~~~g~~Pdvvty--N~LI~gy~k~G~~eeA  738 (1060)
T PLN03218        667 KAFEILQDARKQGIKLGTVS--YSSLMGACSNAKNWK----KALELYEDIKSIKLRPTVSTM--NALITALCEGNQLPKA  738 (1060)
T ss_pred             HHHHHHHHHHHcCCCCCHHH--HHHHHHHHHhCCCHH----HHHHHHHHHHHcCCCCCHHHH--HHHHHHHHHCCCHHHH
Confidence            55444    44566555431  123344444455433    234566666667777765431  234444567787654 


Q ss_pred             ---HHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHH----HcCCCCC
Q psy3308         317 ---VELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLL----QAGAAPD  361 (838)
Q Consensus       317 ---v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll----~~~~~~~  361 (838)
                         ++.+.+.|..++...-  .+.+...++.|.++..+.++    +.|..++
T Consensus       739 lelf~eM~~~Gi~Pd~~Ty--~sLL~a~~k~G~le~A~~l~~~M~k~Gi~pd  788 (1060)
T PLN03218        739 LEVLSEMKRLGLCPNTITY--SILLVASERKDDADVGLDLLSQAKEDGIKPN  788 (1060)
T ss_pred             HHHHHHHHHcCCCCCHHHH--HHHHHHHHHCCCHHHHHHHHHHHHHcCCCCC
Confidence               3344455665543321  13445556678877666554    4455554

>PLN03077 Protein ECB2; Provisional

Probab=88.06  E-value=66  Score=38.41  Aligned_cols=208  Identities=12%  Similarity=0.008  Sum_probs=91.5

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHH-HHHHcCCHHH----HHHHHHcCCCCccccCCCCcHHHHH-H
Q psy3308          96 FTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLH-VACKWGKVAM----VELLISKGANIEAKTRDGLTPLHCA-A  169 (838)
Q Consensus        96 ~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~-~Aa~~g~~~i----v~~L~~~~~~~~~~~~~~~tal~~A-~  169 (838)
                      .+.+..-++.|+++-+..+++.-..++.   ..++.|. ..++.|..+-    .+.+...|..++..   ..+.+..| +
T Consensus       125 n~li~~~~~~g~~~~A~~~f~~m~~~d~---~~~n~li~~~~~~g~~~~A~~~f~~M~~~g~~Pd~~---t~~~ll~~~~  198 (857)
T PLN03077        125 NAMLSMFVRFGELVHAWYVFGKMPERDL---FSWNVLVGGYAKAGYFDEALCLYHRMLWAGVRPDVY---TFPCVLRTCG  198 (857)
T ss_pred             HHHHHHHHhCCChHHHHHHHhcCCCCCe---eEHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCChh---HHHHHHHHhC
Confidence            4445555777777777777766444332   2233333 3355666433    33333445544322   22233333 2


Q ss_pred             HcCCHH----HHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHH-HHhcCCHH---
Q psy3308         170 RSGHDN----VIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHV-ASHCGHVR---  241 (838)
Q Consensus       170 ~~g~~~----iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~-A~~~g~~~---  241 (838)
                      ..++++    +...+++.|...+.  ....+.+...++.|..+-...+++.-...+.   ...++|.. -+..|..+   
T Consensus       199 ~~~~~~~~~~~~~~~~~~g~~~~~--~~~n~Li~~y~k~g~~~~A~~lf~~m~~~d~---~s~n~li~~~~~~g~~~eAl  273 (857)
T PLN03077        199 GIPDLARGREVHAHVVRFGFELDV--DVVNALITMYVKCGDVVSARLVFDRMPRRDC---ISWNAMISGYFENGECLEGL  273 (857)
T ss_pred             CccchhhHHHHHHHHHHcCCCccc--chHhHHHHHHhcCCCHHHHHHHHhcCCCCCc---chhHHHHHHHHhCCCHHHHH
Confidence            333332    33333444443321  1223445555666777666666654322222   22233332 23445433   


Q ss_pred             -HHHHHHHCCCCccccccCCCchHHHHHh-hCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy3308         242 -VAKTLLDRKADPNARALNGFTPLHIACK-KNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVEL  319 (838)
Q Consensus       242 -iv~~L~~~~~~~~~~~~~~~~~l~~a~~-~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~  319 (838)
                       +.+.+.+.|..|+..   ..+.+..++. .+...    ...++.....+.|..++...  ..+.+...++.|+++-...
T Consensus       274 ~lf~~M~~~g~~Pd~~---ty~~ll~a~~~~g~~~----~a~~l~~~~~~~g~~~d~~~--~n~Li~~y~k~g~~~~A~~  344 (857)
T PLN03077        274 ELFFTMRELSVDPDLM---TITSVISACELLGDER----LGREMHGYVVKTGFAVDVSV--CNSLIQMYLSLGSWGEAEK  344 (857)
T ss_pred             HHHHHHHHcCCCCChh---HHHHHHHHHHhcCChH----HHHHHHHHHHHhCCccchHH--HHHHHHHHHhcCCHHHHHH
Confidence             223333345444322   2233333332 22221    12345555555665554322  1234445556677766666


Q ss_pred             HHhC
Q psy3308         320 LLKY  323 (838)
Q Consensus       320 L~~~  323 (838)
                      +++.
T Consensus       345 vf~~  348 (857)
T PLN03077        345 VFSR  348 (857)
T ss_pred             HHhh
Confidence            6553

>PLN03077 Protein ECB2; Provisional

Probab=84.38  E-value=99  Score=36.94  Aligned_cols=322  Identities=11%  Similarity=-0.000  Sum_probs=165.9

Q ss_pred             cHHhH-HHhcCCHHHHHHHHhccccccchhhcccCcchhhhccchhhhhcCcHHHHHH----HHHCCCCcccCCCCCCcH
Q psy3308          24 PALHI-AAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKI----LVDNGATINVQSLNGFTP   98 (838)
Q Consensus        24 ~al~~-Aa~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~----l~~~~~~~~~~~~~~~t~   98 (838)
                      ++|-. -++.|.++-...+++.-..        .+...+.. ....+++.|..+-+-.    ....|..++...  ..+.
T Consensus       125 n~li~~~~~~g~~~~A~~~f~~m~~--------~d~~~~n~-li~~~~~~g~~~~A~~~f~~M~~~g~~Pd~~t--~~~l  193 (857)
T PLN03077        125 NAMLSMFVRFGELVHAWYVFGKMPE--------RDLFSWNV-LVGGYAKAGYFDEALCLYHRMLWAGVRPDVYT--FPCV  193 (857)
T ss_pred             HHHHHHHHhCCChHHHHHHHhcCCC--------CCeeEHHH-HHHHHHhCCCHHHHHHHHHHHHHcCCCCChhH--HHHH
Confidence            44433 4789999888888762110        11112222 2234566677554433    334566655322  2233


Q ss_pred             HHHHHHcCcHHHH----HHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHH-HHHHcCC
Q psy3308          99 LYMAAQENHDGVV----RYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLH-CAARSGH  173 (838)
Q Consensus        99 l~~A~~~g~~~~v----~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~-~A~~~g~  173 (838)
                      |..++..+.++..    ..++..|..++..  ...+.+..-++.|+++-...+.+.-..   .|...+++|. ..++.|.
T Consensus       194 l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~n~Li~~y~k~g~~~~A~~lf~~m~~---~d~~s~n~li~~~~~~g~  268 (857)
T PLN03077        194 LRTCGGIPDLARGREVHAHVVRFGFELDVD--VVNALITMYVKCGDVVSARLVFDRMPR---RDCISWNAMISGYFENGE  268 (857)
T ss_pred             HHHhCCccchhhHHHHHHHHHHcCCCcccc--hHhHHHHHHhcCCCHHHHHHHHhcCCC---CCcchhHHHHHHHHhCCC
Confidence            3333344555433    3344456554432  233556667888888888888776433   2333444444 4456676


Q ss_pred             HH----HHHHHHHcCCCccCCCCCCccHHH-HHHhCCcHHHHHHH----HhCCCCCCcccCCCccHHHHHHhcCCHHHHH
Q psy3308         174 DN----VIDILIEKGAALYSKTKNGLAPLH-MASQGDHEAATRVL----IYHGAGVDEITVDYLTALHVASHCGHVRVAK  244 (838)
Q Consensus       174 ~~----iv~~L~~~~~~~~~~~~~~~~~l~-~A~~~g~~~~v~~L----~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~  244 (838)
                      .+    +.+-+.+.|..+   +....+.+. .++..|..+..+-+    ...|...+..  ...+.+..-+..|.++-+.
T Consensus       269 ~~eAl~lf~~M~~~g~~P---d~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~g~~~d~~--~~n~Li~~y~k~g~~~~A~  343 (857)
T PLN03077        269 CLEGLELFFTMRELSVDP---DLMTITSVISACELLGDERLGREMHGYVVKTGFAVDVS--VCNSLIQMYLSLGSWGEAE  343 (857)
T ss_pred             HHHHHHHHHHHHHcCCCC---ChhHHHHHHHHHHhcCChHHHHHHHHHHHHhCCccchH--HHHHHHHHHHhcCCHHHHH
Confidence            54    333334455443   333334433 34556666554444    3455544432  2234555667788888888


Q ss_pred             HHHHCCCCccccccCCCchHHHHH-hhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH--
Q psy3308         245 TLLDRKADPNARALNGFTPLHIAC-KKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLL--  321 (838)
Q Consensus       245 ~L~~~~~~~~~~~~~~~~~l~~a~-~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~--  321 (838)
                      .+++.-..+   +...++.+..+. +.|..+    .-+++++.+.+.|..|+....  .+.+...+..|.++....++  
T Consensus       344 ~vf~~m~~~---d~~s~n~li~~~~~~g~~~----~A~~lf~~M~~~g~~Pd~~t~--~~ll~a~~~~g~~~~a~~l~~~  414 (857)
T PLN03077        344 KVFSRMETK---DAVSWTAMISGYEKNGLPD----KALETYALMEQDNVSPDEITI--ASVLSACACLGDLDVGVKLHEL  414 (857)
T ss_pred             HHHhhCCCC---CeeeHHHHHHHHHhCCCHH----HHHHHHHHHHHhCCCCCceeH--HHHHHHHhccchHHHHHHHHHH
Confidence            888764332   334455555443 344332    245566666777777764321  23444455667766554444  


Q ss_pred             --hCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH-HHcCcH
Q psy3308         322 --KYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLA-ARANQT  380 (838)
Q Consensus       322 --~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A-~~~g~~  380 (838)
                        +.|...+..  -..+.+..-++.|..+-..-+++.-...   +...++.+..+ +..|..
T Consensus       415 ~~~~g~~~~~~--~~n~Li~~y~k~g~~~~A~~vf~~m~~~---d~vs~~~mi~~~~~~g~~  471 (857)
T PLN03077        415 AERKGLISYVV--VANALIEMYSKCKCIDKALEVFHNIPEK---DVISWTSIIAGLRLNNRC  471 (857)
T ss_pred             HHHhCCCcchH--HHHHHHHHHHHcCCHHHHHHHHHhCCCC---CeeeHHHHHHHHHHCCCH
Confidence              445433211  1122345567788888777777654332   22334444433 344543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	838
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		1e-93
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		6e-36
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		1e-30
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		5e-27
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		4e-25
2xee_A	157	Structural Determinants For Improved Thermal Stabil		2e-30
2xee_A	157	Structural Determinants For Improved Thermal Stabil		2e-25
2xee_A	157	Structural Determinants For Improved Thermal Stabil		2e-25
2xee_A	157	Structural Determinants For Improved Thermal Stabil		1e-24
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		3e-28
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		1e-24
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		5e-23
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		5e-26
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		2e-25
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		2e-24
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		5e-24
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		9e-26
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		9e-23
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-22
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-21
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		2e-25
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		8e-13
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		3e-25
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		2e-15
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		8e-09
1uoh_A	226	Human Gankyrin Length = 226		3e-25
1uoh_A	226	Human Gankyrin Length = 226		2e-15
1uoh_A	226	Human Gankyrin Length = 226		8e-09
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		4e-25
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		4e-22
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		9e-20
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		5e-25
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		9e-23
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		1e-20
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		8e-25
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		3e-20
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		1e-18
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		1e-24
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		7e-15
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		9e-09
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		2e-24
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		1e-14
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		1e-08
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-24
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		7e-20
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-19
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		6e-19
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		7e-24
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		4e-20
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		7e-24
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		1e-21
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		1e-20
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		2e-23
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		4e-22
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		4e-18
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		2e-14
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-23
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		1e-22
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		4e-20
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		4e-23
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		3e-20
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		5e-23
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		1e-22
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		5e-19
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		9e-23
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		6e-21
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-18
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-22
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-22
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		6e-22
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		8e-19
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-16
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		1e-22
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		1e-21
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		1e-18
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		2e-22
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		1e-19
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		1e-19
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		6e-18
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		4e-22
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		1e-19
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		2e-18
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		5e-22
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-20
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		7e-19
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		3e-21
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		3e-19
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		4e-18
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		4e-18
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		3e-17
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		5e-21
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		3e-18
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		4e-18
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		2e-17
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		7e-21
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		5e-18
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		6e-18
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		2e-17
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		2e-20
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		5e-20
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		9e-20
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		9e-19
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		5e-17
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		2e-15
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		1e-13
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		4e-12
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		1e-05
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		1e-18
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		4e-16
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		1e-18
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		7e-16
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		1e-13
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		7e-09
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		3e-18
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		4e-16
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		2e-17
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		5e-12
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		5e-12
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		2e-17
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		5e-12
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		2e-17
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		6e-12
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		6e-12
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		2e-17
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		1e-15
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		2e-13
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		4e-12
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		8e-12
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		3e-17
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		4e-14
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		2e-12
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		3e-17
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		9e-17
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		1e-16
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		4e-16
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		1e-15
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		9e-15
2f8x_K	256	Crystal Structure Of Activated Notch, Csl And Maml		5e-17
2f8x_K	256	Crystal Structure Of Activated Notch, Csl And Maml		4e-11
2f8x_K	256	Crystal Structure Of Activated Notch, Csl And Maml		3e-09
1yyh_A	253	Crystal Structure Of The Human Notch 1 Ankyrin Doma		2e-16
1yyh_A	253	Crystal Structure Of The Human Notch 1 Ankyrin Doma		3e-11
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		2e-16
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		2e-14
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		1e-13
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		2e-13
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		1e-12
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		2e-16
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		3e-14
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		3e-14
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		4e-14
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		3e-16
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		4e-15
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		2e-13
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		1e-12
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		4e-16
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		1e-14
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		3e-14
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		9e-13
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		3e-12
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		6e-12
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		7e-16
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		1e-10
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		1e-15
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		1e-15
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		6e-14
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		2e-13
3ljn_A	364	Ankyrin Repeat Protein From Leishmania Major Length		1e-15
3ljn_A	364	Ankyrin Repeat Protein From Leishmania Major Length		8e-08
3ljn_A	364	Ankyrin Repeat Protein From Leishmania Major Length		1e-07
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		1e-15
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		7e-14
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		2e-13
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		7e-13
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		6e-11
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		2e-15
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		3e-15
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		1e-13
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		5e-13
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		2e-15
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		1e-14
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		2e-06
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		4e-15
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		3e-14
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		3e-13
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		7e-08
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		2e-04
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		4e-15
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		8e-14
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		8e-13
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		1e-12
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		8e-08
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		2e-04
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		5e-15
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		3e-10
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		1e-08
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		8e-15
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		7e-05
2qc9_A	210	Mouse Notch 1 Ankyrin Repeat Intracellular Domain L		1e-14
2qc9_A	210	Mouse Notch 1 Ankyrin Repeat Intracellular Domain L		3e-09
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		5e-14
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		4e-11
2f8y_A	223	Crystal Structure Of Human Notch1 Ankyrin Repeats T		5e-14
2f8y_A	223	Crystal Structure Of Human Notch1 Ankyrin Repeats T		7e-10
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		6e-14
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		1e-13
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		2e-05
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		1e-13
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		8e-11
2xen_A	91	Structural Determinants For Improved Thermal Stabil		8e-13
2xen_A	91	Structural Determinants For Improved Thermal Stabil		1e-09
2xen_A	91	Structural Determinants For Improved Thermal Stabil		1e-08
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		3e-12
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		2e-07
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		1e-06
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		2e-06
1mx4_A	168	Structure Of P18ink4c (F82q) Length = 168		6e-12
1mx4_A	168	Structure Of P18ink4c (F82q) Length = 168		2e-05
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		6e-12
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		6e-11
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		9e-10
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		4e-09
1ikn_D	236	IkappabalphaNF-Kappab Complex Length = 236		7e-12
1ikn_D	236	IkappabalphaNF-Kappab Complex Length = 236		9e-11
1ikn_D	236	IkappabalphaNF-Kappab Complex Length = 236		1e-09
1ikn_D	236	IkappabalphaNF-Kappab Complex Length = 236		7e-09
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		7e-12
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		4e-07
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		5e-06
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		1e-05
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		2e-05
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		1e-11
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		2e-10
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		6e-09
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		1e-11
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		2e-10
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		6e-09
2rfa_A	232	Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat		1e-11
2rfa_A	232	Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat		1e-08
2rfa_A	232	Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat		2e-05
1ap7_A	168	P19-Ink4d From Mouse, Nmr, 20 Structures Length = 1		2e-11
1ap7_A	168	P19-Ink4d From Mouse, Nmr, 20 Structures Length = 1		7e-06
1blx_B	166	P19ink4dCDK6 COMPLEX Length = 166		2e-11
1blx_B	166	P19ink4dCDK6 COMPLEX Length = 166		7e-06
1wg0_A	243	Structural Comparison Of Nas6p Protein Structures I		2e-11
1wg0_A	243	Structural Comparison Of Nas6p Protein Structures I		2e-10
1wg0_A	243	Structural Comparison Of Nas6p Protein Structures I		9e-09
3so8_A	162	Crystal Structure Of Ankra Length = 162		2e-11
3so8_A	162	Crystal Structure Of Ankra Length = 162		2e-07
3so8_A	162	Crystal Structure Of Ankra Length = 162		2e-06
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		2e-11
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		2e-06
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		2e-11
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		2e-07
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		2e-06
1ihb_A	162	Crystal Structure Of P18-Ink4c(Ink6) Length = 162		4e-11
1ihb_A	162	Crystal Structure Of P18-Ink4c(Ink6) Length = 162		2e-04
1bu9_A	168	Solution Structure Of P18-Ink4c, 21 Structures Leng		5e-11
1bu9_A	168	Solution Structure Of P18-Ink4c, 21 Structures Leng		2e-04
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		9e-11
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		6e-10
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		8e-10
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		2e-09
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		2e-09
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		5e-09
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		5e-09
1bd8_A	156	Structure Of Cdk Inhibitor P19ink4d Length = 156		1e-10
1bd8_A	156	Structure Of Cdk Inhibitor P19ink4d Length = 156		2e-05
1bi8_B	166	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-10
1bi8_B	166	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-05
1mx6_A	168	Structure Of P18ink4c (F92n) Length = 168		3e-10
1mx6_A	168	Structure Of P18ink4c (F92n) Length = 168		2e-05
1mx2_A	168	Structure Of F71n Mutant Of P18ink4c Length = 168		3e-10
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		3e-10
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		3e-09
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		1e-07
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		2e-09
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		6e-09
2fo1_E	373	Crystal Structure Of The Csl-Notch-Mastermind Terna		2e-09
2fo1_E	373	Crystal Structure Of The Csl-Notch-Mastermind Terna		3e-09
2fo1_E	373	Crystal Structure Of The Csl-Notch-Mastermind Terna		7e-07
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		2e-09
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		3e-09
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		1e-08
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		2e-09
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		2e-05
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		3e-05
1ycs_B	239	P53-53bp2 Complex Length = 239		4e-09
1ycs_B	239	P53-53bp2 Complex Length = 239		2e-05
1ycs_B	239	P53-53bp2 Complex Length = 239		3e-05
1oy3_D	282	Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer		5e-09
1oy3_D	282	Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer		2e-06
1k3z_D	282	X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodi		5e-09
1k3z_D	282	X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodi		2e-06
3ui2_A	244	Crystal Structure Of The Cpsrp54 Tail Bound To Cpsr		3e-08
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		5e-08
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		5e-05
3deo_A	183	Structural Basis For Specific Substrate Recognition		6e-08
2f37_A	251	Crystal Structure Of The Ankyrin Repeat Domain Of H		1e-07
2f37_A	251	Crystal Structure Of The Ankyrin Repeat Domain Of H		7e-04
4hbd_A	276	Crystal Structure Of Kank2 Ankyrin Repeats Length =		2e-07
2eta_A	256	Crystal Structure Of The Ankyrin Repeat Domain Of T		2e-07
2etc_A	274	Crystal Structure Of The Ankyrin Repeat Domain Of T		3e-07
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		6e-07
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		1e-05
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		1e-05
3aaa_C	123	Crystal Structure Of Actin Capping Protein In Compl		1e-06
3aaa_C	123	Crystal Structure Of Actin Capping Protein In Compl		1e-05
1ymp_A	135	The Crystal Structure Of A Partial Mouse Notch-1 An		2e-06
1ymp_A	135	The Crystal Structure Of A Partial Mouse Notch-1 An		1e-04
2vge_A	229	Crystal Structure Of The C-Terminal Region Of Human		2e-06
2vge_A	229	Crystal Structure Of The C-Terminal Region Of Human		3e-04
2nyj_A	273	Crystal Structure Of The Ankyrin Repeat Domain Of T		3e-06
1d9s_A	136	Tumor Suppressor P15(Ink4b) Structure By Comparativ		3e-06
1bi7_B	156	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-05
3ehq_A	222	Crystal Structure Of Human Osteoclast Stimulating F		1e-05
1dc2_A	156	Solution Nmr Structure Of Tumor Suppressor P16ink4a		2e-05
3lvr_E	497	The Crystal Structure Of Asap3 In Complex With Arf6		6e-05
2b0o_E	301	Crystal Structure Of Uplc1 Gap Domain Length = 301		8e-05
3t9k_A	390	Crystal Structure Of Acap1 C-portion Mutant S554d F		1e-04
3t9k_A	390	Crystal Structure Of Acap1 C-portion Mutant S554d F		5e-04
3t9k_A	390	Crystal Structure Of Acap1 C-portion Mutant S554d F		5e-04
4f1p_A	368	Crystal Structure Of Mutant S554d For Arfgap And An		1e-04
4f1p_A	368	Crystal Structure Of Mutant S554d For Arfgap And An		5e-04
4f1p_A	368	Crystal Structure Of Mutant S554d For Arfgap And An		5e-04
3jue_A	368	Crystal Structure Of Arfgap And Ank Repeat Domain O		1e-04
3jue_A	368	Crystal Structure Of Arfgap And Ank Repeat Domain O		5e-04
3jue_A	368	Crystal Structure Of Arfgap And Ank Repeat Domain O		5e-04
1dcq_A	278	Crystal Structure Of The Arf-Gap Domain And Ankyrin		3e-04
1dcq_A	278	Crystal Structure Of The Arf-Gap Domain And Ankyrin		7e-04

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score =  341 bits (874), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 177/377 (46%), Positives = 254/377 (67%), Gaps = 17/377 (4%)
Query: 428 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDA 487
           TPLH+A+      IV+ LL+ GAS +    + +TPLH+A+R G+ ++A  LLQ+ A V+A
Sbjct: 16  TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 75
Query: 488 PTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 547
             KD  T LH +A+ G   +  +L E+ A+    T  G TPLH+AA+ G ++    LL+K
Sbjct: 76  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 135
Query: 548 DAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKN 607
           +A                 S    TKKGFTPLH+AAKYG++++A++LL++DA  ++ GKN
Sbjct: 136 EA-----------------SQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKN 178
Query: 608 GVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKP 667
           G+TPLHVA H+++ ++  LLL RG SPH+ A NGYTPLHIAAK+NQ+++A +LL+Y    
Sbjct: 179 GLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA 238
Query: 668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM 727
           NAES  G TPLHL+AQEGH +M +LL+   A  +   K+GLTPLHL AQE  V VA + +
Sbjct: 239 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLI 298
Query: 728 FNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVL 787
            +G  +D  T+ G+TPLH+ASH+G + +V++L+++ A+VNA T LGY+PLHQA+QQG   
Sbjct: 299 KHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTD 358
Query: 788 IIDLLLGAGAQPNATTN 804
           I+ LLL  GA PN  ++
Sbjct: 359 IVTLLLKNGASPNEVSS 375

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score =  149 bits (376), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 128/228 (56%)
Query: 576 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPH 635
            TPLH+A+  G + I + LLQ+ A  +       TPLH+A+   H  VA  LL   A  +
Sbjct: 15  LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 74
Query: 636 AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIE 695
           A AK+  TPLH AA+    ++   LLE NA PN  + AG TPLH++A+EGH +    L+E
Sbjct: 75  AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE 134
Query: 696 HGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNM 755
             A+ +   K G TPLH+ A+  KV VA + +   A  +   K G TPLH+A H   L++
Sbjct: 135 KEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDI 194
Query: 756 VRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
           V+ L+  G + ++    GYTPLH A++Q +V +   LL  G   NA +
Sbjct: 195 VKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAES 242

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  131 bits (330), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 102/162 (62%), Gaps = 17/162 (10%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A+ ++  TPLH+A+R G+ +I  +LL+ GA V+A  KDG
Sbjct: 9   AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
           YT LH++A+EG  E+  +L ++GA + A  K G+TPLHLAA+ G ++I ++LL+      
Sbjct: 69  YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLK------ 122
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 594
                      +GA + A  K G TP  LA + G   IA++L
Sbjct: 123 -----------AGADVNAQDKFGKTPFDLAIREGHEDIAEVL 153

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  119 bits (299), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 90/141 (63%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
            Q     IL  +GA + A  K G+TPLHLAA+ G ++I ++LL+  A V+++ K+G TPL
Sbjct: 13  GQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPL 72
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           H+A+   H  +  +LL  GA  +A  K+GYTPLH+AA++  ++I   LL+  A  NA+ K
Sbjct: 73  HLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDK 132
Query: 673 AGFTPLHLSAQEGHTDMSSLL 693
            G TP  L+ +EGH D++ +L
Sbjct: 133 FGKTPFDLAIREGHEDIAEVL 153

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 90/145 (62%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+  Q D    L+   A  NA+ K G+TPLHL+A+EGH ++  +L++ GA V+ + K+G
Sbjct: 9   AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            TPLHL A+E  + +  + +  GA+++   K G+TPLH+A+  G L +V  L++ GA+VN
Sbjct: 69  YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLL 792
           A    G TP   A ++G   I ++L
Sbjct: 129 AQDKFGKTPFDLAIREGHEDIAEVL 153

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 101/162 (62%), Gaps = 17/162 (10%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A+ ++  TPLH+A+R G+ +I  +LL+ GA V+A  KDG
Sbjct: 9   AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
           YT LH++A+EG  E+  +L ++GA + A  K G+TPLHLAA+ G ++I ++LL+      
Sbjct: 69  YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLK------ 122
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 594
                      +GA + A  K G TP  LA   G   IA++L
Sbjct: 123 -----------AGADVNAQDKFGKTPFDLAIDNGNEDIAEVL 153

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 17/162 (10%)
Query: 499 SAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
           +A+ GQD+   IL  +GA + A  K G+TPLHLAA+ G ++I ++LL+            
Sbjct: 9   AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLK------------ 56
Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY 618
                +GA + A  K G+TPLHLAA+ G ++I ++LL+  A V+++ K+G TPLH+A+  
Sbjct: 57  -----AGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAARE 111
Query: 619 DHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTL 660
            H  +  +LL  GA  +A  K G TP  +A      DIA  L
Sbjct: 112 GHLEIVEVLLKAGADVNAQDKFGKTPFDLAIDNGNEDIAEVL 153

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 88/141 (62%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
            Q     IL  +GA + A  K G+TPLHLAA+ G ++I ++LL+  A V+++ K+G TPL
Sbjct: 13  GQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPL 72
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           H+A+   H  +  +LL  GA  +A  K+GYTPLH+AA++  ++I   LL+  A  NA+ K
Sbjct: 73  HLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDK 132
Query: 673 AGFTPLHLSAQEGHTDMSSLL 693
            G TP  L+   G+ D++ +L
Sbjct: 133 FGKTPFDLAIDNGNEDIAEVL 153

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 88/145 (60%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+  Q D    L+   A  NA+ K G+TPLHL+A+EGH ++  +L++ GA V+ + K+G
Sbjct: 9   AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 68
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            TPLHL A+E  + +  + +  GA+++   K G+TPLH+A+  G L +V  L++ GA+VN
Sbjct: 69  YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 128
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLL 792
           A    G TP   A   G   I ++L
Sbjct: 129 AQDKFGKTPFDLAIDNGNEDIAEVL 153

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score =  124 bits (310), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/124 (49%), Positives = 90/124 (72%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A+ ++  TPLH+A+R G+ +I  +LL+ GA V+A  KDG
Sbjct: 21  AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
           YT LH++A+EG  E+  +L ++GA + A  K G+TPLHLAA+ G ++I ++LL+  A V+
Sbjct: 81  YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 553 SQGK 556
           +Q K
Sbjct: 141 AQDK 144

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 87/141 (61%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
            Q     IL  +GA + A  K G+TPLHLAA+ G ++I ++LL+  A V+++ K+G TPL
Sbjct: 25  GQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPL 84
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           H+A+   H  +  +LL  GA  +A  K+GYTPLH+AA++  ++I   LL+  A  NA+ K
Sbjct: 85  HLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDK 144
Query: 673 AGFTPLHLSAQEGHTDMSSLL 693
            G T   +S   G+ D++ +L
Sbjct: 145 FGKTAFDISIDNGNEDLAEIL 165

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score =  106 bits (265), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 87/145 (60%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+  Q D    L+   A  NA+ K G+TPLHL+A+EGH ++  +L++ GA V+ + K+G
Sbjct: 21  AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDG 80
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            TPLHL A+E  + +  + +  GA+++   K G+TPLH+A+  G L +V  L++ GA+VN
Sbjct: 81  YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVN 140
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLL 792
           A    G T    +   G   + ++L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score =  116 bits (291), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 57/124 (45%), Positives = 86/124 (69%)
Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
           G TPLHLAAR    ++V++LL  GA V+A+ +  +TPLH+A+R G+ ++  LLL+ GA V
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           +A  K+G T LH++A+ G  EV  +L E+GA + A  K G TPLHLAA+ G +++ ++LL
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 546 QKDA 549
           +  A
Sbjct: 122 EAGA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score =  114 bits (286), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/124 (47%), Positives = 84/124 (67%)
Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
           G TPLHLAA+ G +++ ++LL+  A V+++ KNG TPLH+A+   H  V  LLL+ GA  
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
           +A  KNG TPLH+AA+   +++   LLE  A  NA+ K G TPLHL+A+ GH ++  LL+
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 695 EHGA 698
           E GA
Sbjct: 122 EAGA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/125 (44%), Positives = 81/125 (64%)
Query: 640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT 699
           NG TPLH+AA+   +++   LLE  A  NA+ K G TPLHL+A+ GH ++  LL+E GA 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 700 VSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
           V+ + KNG TPLHL A+   + V  + +  GA+++   K G TPLH+A+  G L +V+ L
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 120
Query: 760 VENGA 764
           +E GA
Sbjct: 121 LEAGA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score =  109 bits (273), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 57/124 (45%), Positives = 82/124 (66%)
Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEI 733
           G TPLHL+A+ GH ++  LL+E GA V+ + KNG TPLHL A+   + V  + +  GA++
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
           +   K G TPLH+A+  G L +V+ L+E GA+VNA    G TPLH A++ G + ++ LLL
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121
Query: 794 GAGA 797
            AGA
Sbjct: 122 EAGA 125

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score =  115 bits (288), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 87/147 (59%)
Query: 72  TGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITP 131
            G ++  K L++NGA +N    +G TPL+ AA+E H  +V+ L+SKG +         TP
Sbjct: 14  NGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTP 73
Query: 132 LHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKT 191
           LH A K G   +V+LLISKGA++ AK  DG TPLH AA+ GH  ++ +LI KGA + +  
Sbjct: 74  LHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNTSD 133
Query: 192 KNGLAPLHMASQGDHEAATRVLIYHGA 218
            +G  PL +A +  +E   ++L   G 
Sbjct: 134 SDGRTPLDLAREHGNEEIVKLLEKQGG 160

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score =  105 bits (263), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AA     D V+ L+ NGA V+A   + +TPLH A++ G+ +I  LL+  GA V+A   DG
Sbjct: 11  AAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDG 70
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
            T LH +AKEG  E+  +L   GA + A    G TPLH AAK G  +I ++L+ K     
Sbjct: 71  RTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISK----- 125
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 594
                       GA +  +   G TPL LA ++G  +I ++L
Sbjct: 126 ------------GADVNTSDSDGRTPLDLAREHGNEEIVKLL 155

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 87/167 (52%), Gaps = 17/167 (10%)
Query: 466 ASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKG 525
           A+  GN D    L+++GA V+A   DG T LH +AKEG  E+  +L   GA + A    G
Sbjct: 11  AAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDG 70
Query: 526 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKY 585
            TPLH AAK G  +I ++L+ K                 GA + A    G TPLH AAK 
Sbjct: 71  RTPLHYAAKEGHKEIVKLLISK-----------------GADVNAKDSDGRTPLHYAAKE 113
Query: 586 GRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGA 632
           G  +I ++L+ K A V++   +G TPL +A  + ++ +  LL  +G 
Sbjct: 114 GHKEIVKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 80/150 (53%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+    D    L+E  A  NA    G TPLH +A+EGH ++  LLI  GA V+ +  +G
Sbjct: 11  AAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDG 70
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            TPLH  A+E    +  + +  GA+++     G TPLH A+  G   +V+ L+  GA+VN
Sbjct: 71  RTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVN 130
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
            + + G TPL  A + G   I+ LL   G 
Sbjct: 131 TSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 138/273 (50%), Gaps = 26/273 (9%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
           ++ K+ ++LT    +  A+  +  TPLHLAA Y R++I Q+LLQ  A V ++ K G+ PL
Sbjct: 36  NEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPL 95
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           H A  Y H  V  LLL  GA  +A+    +TPLH AA KN++++ + LL + A P   + 
Sbjct: 96  HNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNC 155
Query: 673 AGFTPLHLSAQ-----------EGHTDMSSLLIEHGATVS----------HQAKNGLTPL 711
            G + + ++             +GH+ + +      A V            Q ++  T L
Sbjct: 156 HGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETAL 215
Query: 712 HLCA----QEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
           H CA       +  VA + +  GA ++   K   TPLH+A+     +++  L ++GA +N
Sbjct: 216 H-CAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN 274
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
           A  +LG T LH+A+  G +    LLL  G+ P+
Sbjct: 275 ALDSLGQTALHRAALAGHLQTCRLLLSYGSDPS 307

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 26/221 (11%)
Query: 610 TPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNA 669
           TPLH+A+ Y+   +  LLL  GA  HA  K G  PLH A      ++   LL++ A  NA
Sbjct: 60  TPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNA 119
Query: 670 ESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN 729
                FTPLH +A +   ++ SLL+ HGA  +    +G + + + A   ++       F 
Sbjct: 120 MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDM-APTPELRERLTYEFK 178
Query: 730 G---------AEIDPVTKA------GF-------TPLHIAS---HFGQLNMVRYLVENGA 764
           G         A++  V K        F       T LH A    H  +  +   L+  GA
Sbjct: 179 GHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGA 238
Query: 765 NVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNL 805
           NVN       TPLH A+++    ++++L   GA+ NA  +L
Sbjct: 239 NVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSL 279

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 105/194 (54%), Gaps = 3/194 (1%)
Query: 569 TATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLL 628
           T T +   T LH A   G  +I + LLQ   PV+ +   G +PLH+A+      +   LL
Sbjct: 35  TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALL 94
Query: 629 DRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD 688
            +GA  +AV +NG TPLH AA KN+ +IA  LLE  A P+A+     T +H +A +G+  
Sbjct: 95  GKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLK 154
Query: 689 MSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS 748
           M  +L+ + A+ + Q   G TPLHL   E++V  A + +  GA I    K   TPL +A 
Sbjct: 155 MIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAK 214
Query: 749 HFGQLNMV-RYLVE 761
             G L ++ + +VE
Sbjct: 215 --GGLGLILKRMVE 226

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 78/159 (49%)
Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
           ++  T LH A      +I   LL+     N +  AG++PLH++A  G  ++   L+  GA
Sbjct: 39  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGA 98
Query: 699 TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY 758
            V+   +NG TPLH  A +++  +A + +  GA  D       T +H A+  G L M+  
Sbjct: 99  QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHI 158
Query: 759 LVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
           L+   A+ N     G TPLH A  + RV    LL+  GA
Sbjct: 159 LLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGA 197

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 709 TPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNA 768
           T LH         +    +  G  ++    AG++PLHIA+  G+  +V+ L+  GA VNA
Sbjct: 43  TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNA 102
Query: 769 TTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA 801
               G TPLH A+ + R  I  +LL  GA P+A
Sbjct: 103 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA 135

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 105/194 (54%), Gaps = 3/194 (1%)
Query: 569 TATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLL 628
           T T +   T LH A   G  +I + LLQ   PV+ +   G +PLH+A+      +   LL
Sbjct: 34  TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALL 93
Query: 629 DRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD 688
            +GA  +AV +NG TPLH AA KN+ +IA  LLE  A P+A+     T +H +A +G+  
Sbjct: 94  GKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLK 153
Query: 689 MSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS 748
           M  +L+ + A+ + Q   G TPLHL   E++V  A + +  GA I    K   TPL +A 
Sbjct: 154 MIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAK 213
Query: 749 HFGQLNMV-RYLVE 761
             G L ++ + +VE
Sbjct: 214 --GGLGLILKRMVE 225

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 78/159 (49%)
Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
           ++  T LH A      +I   LL+     N +  AG++PLH++A  G  ++   L+  GA
Sbjct: 38  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGA 97
Query: 699 TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY 758
            V+   +NG TPLH  A +++  +A + +  GA  D       T +H A+  G L M+  
Sbjct: 98  QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHI 157
Query: 759 LVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
           L+   A+ N     G TPLH A  + RV    LL+  GA
Sbjct: 158 LLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGA 196

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 709 TPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNA 768
           T LH         +    +  G  ++    AG++PLHIA+  G+  +V+ L+  GA VNA
Sbjct: 42  TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNA 101
Query: 769 TTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA 801
               G TPLH A+ + R  I  +LL  GA P+A
Sbjct: 102 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA 134

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 59/126 (46%), Positives = 82/126 (65%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A      TPLH+A+  G+ +I  +LL+HGA VDA    G
Sbjct: 21  AARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
           YT LH++A  G  E+  +L ++GA + A    G TPLHLAAK+G ++I ++LL+  A V+
Sbjct: 81  YTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVN 140
Query: 553 SQGKVA 558
           +Q K  
Sbjct: 141 AQDKFG 146

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 82/141 (58%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
            Q     IL  +GA + A    G TPLHLAA  G ++I ++LL+  A VD+    G TPL
Sbjct: 25  GQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPL 84
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           H+A+++ H  +  +LL  GA  +A+  +G TPLH+AAK   ++I   LL++ A  NA+ K
Sbjct: 85  HLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDK 144
Query: 673 AGFTPLHLSAQEGHTDMSSLL 693
            G T   +S   G+ D++ +L
Sbjct: 145 FGKTAFDISIDNGNEDLAEIL 165

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 95.9 bits (237), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +A+ G  D   +L+ +GA V+     G TPLHL A    + +  + + +GA++D     G
Sbjct: 21  AARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFG 80
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
           +TPLH+A+++G L +V  L++NGA+VNA  + G TPLH A++ G + I+++LL  GA  N
Sbjct: 81  YTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVN 140
Query: 801 ATTNLFCCA-TILVKNGAE 818
           A       A  I + NG E
Sbjct: 141 AQDKFGKTAFDISIDNGNE 159

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score =  113 bits (282), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/126 (46%), Positives = 84/126 (66%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+AR     TPLH+A+  G+ +I  +LL++GA V+A    G
Sbjct: 21  AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
            T LH++A+ G  E+  +L ++GA + A+   GFTPLHLAAK G ++I ++LL+  A V+
Sbjct: 81  VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 553 SQGKVA 558
           +Q K  
Sbjct: 141 AQDKFG 146

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score =  105 bits (262), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 84/141 (59%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
            Q     IL  +GA + A    G+TPLHLAA +G ++I ++LL+  A V+++   GVTPL
Sbjct: 25  GQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLGVTPL 84
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           H+A+   H  +  +LL  GA  +A   +G+TPLH+AAK+  ++I   LL+  A  NA+ K
Sbjct: 85  HLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVNAQDK 144
Query: 673 AGFTPLHLSAQEGHTDMSSLL 693
            G T   +S   G+ D++ +L
Sbjct: 145 FGKTAFDISIDNGNEDLAEIL 165

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 83/145 (57%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+  Q D    L+   A  NA    G+TPLHL+A  GH ++  +L+++GA V+ +   G
Sbjct: 21  AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
           +TPLHL A+   + +  + + NGA+++     GFTPLH+A+  G L +V  L++NGA+VN
Sbjct: 81  VTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVN 140
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLL 792
           A    G T    +   G   + ++L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score =  112 bits (280), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 82/126 (65%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A   +  TPLH+A+ +G+ +I  +LL+HGA V+A   DG
Sbjct: 21  AARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
           +T LH++A  G  E+  +L + GA + A    G TPLHLAA  G ++I ++LL+  A V+
Sbjct: 81  WTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVN 140
Query: 553 SQGKVA 558
           +Q K  
Sbjct: 141 AQDKFG 146

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 81/144 (56%)
Query: 582 AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNG 641
           AA+ G+    ++L+   A V++    G TPLH+A+   H  +  +LL  GA  +A   +G
Sbjct: 21  AARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDG 80
Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVS 701
           +TPLH+AA    ++I   LL+Y A  NA+   G TPLHL+A  GH ++  +L++HGA V+
Sbjct: 81  WTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVN 140
Query: 702 HQAKNGLTPLHLCAQEDKVNVATI 725
            Q K G T   +       ++A I
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEI 164

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 79/145 (54%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+  Q D    L+   A  NA    G TPLHL+A  GH ++  +L++HGA V+ +  +G
Sbjct: 21  AARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDG 80
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            TPLHL A    + +  + +  GA+++     G TPLH+A+  G L +V  L+++GA+VN
Sbjct: 81  WTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVN 140
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLL 792
           A    G T    +   G   + ++L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 96/179 (53%)
Query: 569 TATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLL 628
           T T +   T LH A   G  +I + LLQ   PV+ +   G +PLH+A+      +   LL
Sbjct: 34  TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALL 93
Query: 629 DRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD 688
            +GA  +AV +NG TPLH AA KN+ +IA  LLE  A P+A+     T +H +A +G+  
Sbjct: 94  VKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLK 153
Query: 689 MSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIA 747
           M  +L+ + A+ + Q   G TPLHL   E++V  A   +  GA I    K   TPL +A
Sbjct: 154 MVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA 212

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 77/159 (48%)
Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
           ++  T LH A      +I   LL+     N +  AG++PLH++A  G  ++   L+  GA
Sbjct: 38  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGA 97
Query: 699 TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY 758
            V+   +NG TPLH  A +++  +A + +  GA  D       T +H A+  G L MV  
Sbjct: 98  HVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHI 157
Query: 759 LVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
           L+   A+ N     G TPLH A  + RV     L+  GA
Sbjct: 158 LLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGA 196

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 49/93 (52%)
Query: 709 TPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNA 768
           T LH         +    +  G  ++    AG++PLHIA+  G+  +V+ L+  GA+VNA
Sbjct: 42  TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAHVNA 101
Query: 769 TTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA 801
               G TPLH A+ + R  I  +LL  GA P+A
Sbjct: 102 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA 134

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score =  111 bits (278), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 96/179 (53%)
Query: 569 TATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLL 628
           T T +   T LH A   G  +I + LLQ   PV+ +   G +PLH+A+      +   LL
Sbjct: 34  TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALL 93
Query: 629 DRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD 688
            +GA  +AV +NG TPLH AA KN+ +IA  LLE  A P+A+     T +H +A +G+  
Sbjct: 94  VKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLK 153
Query: 689 MSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIA 747
           M  +L+ + A+ + Q   G TPLHL   E++V  A   +  GA I    K   TPL +A
Sbjct: 154 MVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA 212

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 77/159 (48%)
Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
           ++  T LH A      +I   LL+     N +  AG++PLH++A  G  ++   L+  GA
Sbjct: 38  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGA 97
Query: 699 TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY 758
            V+   +NG TPLH  A +++  +A + +  GA  D       T +H A+  G L MV  
Sbjct: 98  HVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHI 157
Query: 759 LVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
           L+   A+ N     G TPLH A  + RV     L+  GA
Sbjct: 158 LLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGA 196

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 709 TPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNA 768
           T LH         +    +  G  ++    AG++PLHIA+  G   +V+ L+  GA+VNA
Sbjct: 42  TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNA 101
Query: 769 TTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA 801
               G TPLH A+ + R  I  +LL  GA P+A
Sbjct: 102 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA 134

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score =  110 bits (275), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 86/147 (58%)
Query: 72  TGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITP 131
            G ++  K L++NGA +N    +G TPL+ AA+  H  VV+ L+SKG +         TP
Sbjct: 14  NGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTP 73
Query: 132 LHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKT 191
           LH A + G   +V+LLISKGA++ AK  DG TPLH AA +GH  V+ +LI KGA + +  
Sbjct: 74  LHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSD 133
Query: 192 KNGLAPLHMASQGDHEAATRVLIYHGA 218
            +G  PL +A +  +E   ++L   G 
Sbjct: 134 SDGRTPLDLAREHGNEEVVKLLEKQGG 160

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 96.3 bits (238), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AA     D V+ L+ NGA V+A   + +TPLH A+  G+ ++  LL+  GA V+A   DG
Sbjct: 11  AAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDG 70
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
            T LH +A+ G  EV  +L   GA + A    G TPLH AA+ G  ++ ++L+ K     
Sbjct: 71  RTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK----- 125
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 597
                       GA +  +   G TPL LA ++G  ++ ++L ++
Sbjct: 126 ------------GADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQ 158

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 466 ASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKG 525
           A+  GN D    L+++GA V+A   DG T LH +A+ G  EV  +L   GA + A    G
Sbjct: 11  AAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDG 70
Query: 526 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKY 585
            TPLH AA+ G  ++ ++L+ K                 GA + A    G TPLH AA+ 
Sbjct: 71  RTPLHHAAENGHKEVVKLLISK-----------------GADVNAKDSDGRTPLHHAAEN 113
Query: 586 GRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGA 632
           G  ++ ++L+ K A V++   +G TPL +A  + ++ V  LL  +G 
Sbjct: 114 GHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 93.2 bits (230), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 78/150 (52%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+    D    L+E  A  NA    G TPLH +A+ GH ++  LLI  GA V+ +  +G
Sbjct: 11  AAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDG 70
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            TPLH  A+     V  + +  GA+++     G TPLH A+  G   +V+ L+  GA+VN
Sbjct: 71  RTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN 130
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
            + + G TPL  A + G   ++ LL   G 
Sbjct: 131 TSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score =  109 bits (272), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 82/134 (61%)
Query: 560 ILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYD 619
           IL  +GA + A    G+TPLHLAA +G ++I ++LL+  A V++    G TPLH+A+H+ 
Sbjct: 32  ILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLGSTPLHLAAHFG 91
Query: 620 HQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLH 679
           H  +  +LL  GA  +A   NG TPLH+AA +  ++I   LL+Y A  NA+ K G T   
Sbjct: 92  HLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVNAQDKFGKTAFD 151
Query: 680 LSAQEGHTDMSSLL 693
           +S   G+ D++ +L
Sbjct: 152 ISINNGNEDLAEIL 165

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 97.1 bits (240), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +A+ G  D   +L+ +GA V+     G TPLHL A    + +  + + NGA+++     G
Sbjct: 21  AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLG 80
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
            TPLH+A+HFG L +V  L++NGA+VNA  + G TPLH A+ +G + I+++LL  GA  N
Sbjct: 81  STPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVN 140
Query: 801 ATTNLFCCA-TILVKNGAE 818
           A       A  I + NG E
Sbjct: 141 AQDKFGKTAFDISINNGNE 159

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score =  109 bits (272), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 59/124 (47%), Positives = 83/124 (66%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A     +TPLH+A+  G+ +I  +LL+HGA V+A  K G
Sbjct: 21  AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
            T LH++A  G  E+  +L ++GA + AT   GFTPLHLAA  G ++I ++LL+  A V+
Sbjct: 81  DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 553 SQGK 556
           +Q K
Sbjct: 141 AQDK 144

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 80/141 (56%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
            Q     IL  +GA + A    G TPLHLAA  G ++I ++LL+  A V++  K G TPL
Sbjct: 25  GQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPL 84
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           H+A+ Y H  +  +LL  GA  +A    G+TPLH+AA    ++I   LL+Y A  NA+ K
Sbjct: 85  HLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDK 144
Query: 673 AGFTPLHLSAQEGHTDMSSLL 693
            G T   +S   G+ D++ +L
Sbjct: 145 FGKTAFDISIDNGNEDLAEIL 165

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 82/145 (56%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+  Q D    L+   A  NAE  +G TPLHL+A +GH ++  +L++HGA V+   K G
Sbjct: 21  AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            TPLHL A    + +  + + NGA+++     GFTPLH+A+  G L +V  L++ GA+VN
Sbjct: 81  DTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVN 140
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLL 792
           A    G T    +   G   + ++L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 111/228 (48%), Gaps = 9/228 (3%)
Query: 192 KNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKA 251
           +N  +PLH A++  H     +L+  GA +D  + D  T L  A+   H+   K L+   A
Sbjct: 9   QNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGA 68
Query: 252 DPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDR-KADPNARALNGFTPLHIACK 310
             + +   G T LH+A KK  Y+        V + LL   + D N +   G+TP+  A +
Sbjct: 69  LVDPKDAEGSTCLHLAAKKGHYE--------VVQYLLSNGQMDVNCQDDGGWTPMIWATE 120
Query: 311 KNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETP 370
                +V+LLL  G+ I          LH A+F GC++IA  LL A        + G++P
Sbjct: 121 YKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSP 180
Query: 371 LHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQ 418
           LH+AAR N+ D V + L   + V  + +E +TPL  AS   +  SA Q
Sbjct: 181 LHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQ 228

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 113/223 (50%), Gaps = 16/223 (7%)
Query: 460 QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASIT 519
           ++PLH A+  G+ DI  +L+Q GA++D  ++D  T L  +A+    E    L ++GA + 
Sbjct: 12  RSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVD 71
Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPL 579
               +G T LHLAAK G  ++ Q LL       S G++          +      G+TP+
Sbjct: 72  PKDAEGSTCLHLAAKKGHYEVVQYLL-------SNGQM---------DVNCQDDGGWTPM 115
Query: 580 HLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAK 639
             A +Y  + + ++LL K + ++ +       LH A+     ++A +LL      HAV  
Sbjct: 116 IWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNI 175
Query: 640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSA 682
           +G +PLHIAA++N+ D     L  ++    ++K G TPL  ++
Sbjct: 176 HGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCAS 218

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Query: 577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA 636
           +PLH AA+ G + I  ML+Q  A +D+  ++  TPL  A+  +H      L+  GA    
Sbjct: 13  SPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP 72
Query: 637 VAKNGYTPLHIAAKKNQMDIATTLLEY-NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIE 695
               G T LH+AAKK   ++   LL       N +   G+TP+  + +  H D+  LL+ 
Sbjct: 73  KDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLS 132
Query: 696 HGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNM 755
            G+ ++ +       LH  A    V++A I +    ++  V   G +PLHIA+   + + 
Sbjct: 133 KGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDC 192
Query: 756 VRYLVENGANVNATTNLGYTPLHQASQQGRVL 787
           V   +   ++V      G TPL  AS   +V 
Sbjct: 193 VVLFLSRDSDVTLKNKEGETPLQCASLNSQVW 224

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Query: 676 TPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDP 735
           +PLH +A+ GH D+  +L++ GA +   +++  TPL   A+ + +      +  GA +DP
Sbjct: 13  SPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP 72
Query: 736 VTKAGFTPLHIASHFGQLNMVRYLVENG-ANVNATTNLGYTPLHQASQQGRVLIIDLLLG 794
               G T LH+A+  G   +V+YL+ NG  +VN   + G+TP+  A++   V ++ LLL 
Sbjct: 73  KDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLS 132
Query: 795 AGAQPNATTN 804
            G+  N   N
Sbjct: 133 KGSDINIRDN 142

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 80/126 (63%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A      TPLH+A+  G+ +I  +LL++GA V+A    G
Sbjct: 21  AARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
            T LH++A  G  EV  +L ++GA + A    GFTPLHLAA  G ++I ++LL+  A V+
Sbjct: 81  VTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVN 140
Query: 553 SQGKVA 558
           +Q K  
Sbjct: 141 AQDKFG 146

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score =  105 bits (262), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 83/141 (58%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
            Q     IL  +GA + A+   G+TPLHLAA +G ++I ++LL+  A V++    GVTPL
Sbjct: 25  GQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPL 84
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           H+A+   H  V  +LL  GA  +A   NG+TPLH+AA    ++I   LL++ A  NA+ K
Sbjct: 85  HLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDK 144
Query: 673 AGFTPLHLSAQEGHTDMSSLL 693
            G T   +S   G+ D++ +L
Sbjct: 145 FGKTAFDISIDNGNEDLAEIL 165

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 82/145 (56%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+  Q D    L+   A  NA    G+TPLHL+A  GH ++  +L+++GA V+     G
Sbjct: 21  AARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLG 80
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
           +TPLHL A    + V  + + NGA+++     GFTPLH+A++ G L +V  L+++GA+VN
Sbjct: 81  VTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVN 140
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLL 792
           A    G T    +   G   + ++L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score =  107 bits (266), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 82/134 (61%)
Query: 560 ILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYD 619
           IL  +GA + AT   G TPLHLAA  G+++I ++LL+  A V++    G+TPLH+A++  
Sbjct: 24  ILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAYDG 83
Query: 620 HQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLH 679
           H  +  +LL  GA  +A  + G+TPLH+AA   Q++I   LL++ A  NA+   G T   
Sbjct: 84  HLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTAFD 143
Query: 680 LSAQEGHTDMSSLL 693
           +S  +G  D++ +L
Sbjct: 144 ISINQGQEDLAEIL 157

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +A  G  D   +L+ +GA V+    NGLTPLHL A   ++ +  + + NGA+++    AG
Sbjct: 13  AAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAG 72
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
            TPLH+A++ G L +V  L+++GA+VNA    G+TPLH A+  G++ I+++LL  GA  N
Sbjct: 73  ITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVN 132
Query: 801 ATTNLFCCA-TILVKNGAE 818
           A   L   A  I +  G E
Sbjct: 133 AQDALGLTAFDISINQGQE 151

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score =  106 bits (265), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 81/126 (64%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A   +  TPLH+A+  G+ +I  +LL++GA V+A    G
Sbjct: 21  AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
            T LH++A  G  E+  +L + GA + A    G TPLHLAAKYG ++I ++LL+  A V+
Sbjct: 81  ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 553 SQGKVA 558
           +Q K  
Sbjct: 141 AQDKFG 146

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 83/141 (58%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
            Q     IL  +GA + AT   G+TPLHLAA  G ++I ++LL+  A V++    G+TPL
Sbjct: 25  GQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPL 84
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           H+A+   H  +  +LL  GA  +A   +G+TPLH+AAK   ++I   LL++ A  NA+ K
Sbjct: 85  HLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVNAQDK 144
Query: 673 AGFTPLHLSAQEGHTDMSSLL 693
            G T   +S   G+ D++ +L
Sbjct: 145 FGKTAFDISIDNGNEDLAEIL 165

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 81/145 (55%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+  Q D    L+   A  NA    G+TPLHL+A  GH ++  +L+++GA V+     G
Sbjct: 21  AARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTG 80
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
           +TPLHL A    + +  + + +GA+++     G TPLH+A+ +G L +V  L+++GA+VN
Sbjct: 81  ITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVN 140
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLL 792
           A    G T    +   G   + ++L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score =  105 bits (262), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 84/161 (52%), Gaps = 8/161 (4%)
Query: 234 ASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKAD 293
           A+  G+    K LL+  ADPNA   +G TPLH A +          H  + K LL + AD
Sbjct: 11  AAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENG--------HKEIVKLLLSKGAD 62
Query: 294 PNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFL 353
           PNA+  +G TPLH A +    ++V+LLL  GA   A    G TPLH A+  G   I   L
Sbjct: 63  PNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLL 122
Query: 354 LQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVD 394
           L  GA P+T+   G TPL LA      +IV++L + G  ++
Sbjct: 123 LSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLE 163

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 99.8 bits (247), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 79/141 (56%)
Query: 561 LTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDH 620
           L E+GA   A+   G TPLH AA+ G  +I ++LL K A  +++  +G TPLH A+   H
Sbjct: 23  LLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGH 82
Query: 621 QNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHL 680
           + +  LLL +GA P+A   +G TPLH AA+    +I   LL   A PN     G TPL L
Sbjct: 83  KEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDL 142
Query: 681 SAQEGHTDMSSLLIEHGATVS 701
           + + G+ ++  LL + G  + 
Sbjct: 143 AREHGNEEIVKLLEKQGGWLE 163

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 76/150 (50%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+    D    LLE  A PNA    G TPLH +A+ GH ++  LL+  GA  + +  +G
Sbjct: 11  AAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDG 70
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            TPLH  A+     +  + +  GA+ +     G TPLH A+  G   +V+ L+  GA+ N
Sbjct: 71  RTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPN 130
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
            + + G TPL  A + G   I+ LL   G 
Sbjct: 131 TSDSDGRTPLDLAREHGNEEIVKLLEKQGG 160

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score =  105 bits (262), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 86/147 (58%)
Query: 72  TGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITP 131
            G ++  K L++NGA +N    +G TPL++AA+  H  VV+ LLS+G +         TP
Sbjct: 14  NGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTP 73
Query: 132 LHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKT 191
           LH+A + G   +V+LL+S+GA+  AK  DG TPLH AA +GH  V+ +L+ +GA   +  
Sbjct: 74  LHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNTSD 133
Query: 192 KNGLAPLHMASQGDHEAATRVLIYHGA 218
            +G  PL +A +  +E   ++L   G 
Sbjct: 134 SDGRTPLDLAREHGNEEVVKLLEKQGG 160

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 8/161 (4%)
Query: 234 ASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKAD 293
           A+  G+    K LL+  AD NA   +G TPLH+A +          H  V K LL + AD
Sbjct: 11  AAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENG--------HKEVVKLLLSQGAD 62
Query: 294 PNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFL 353
           PNA+  +G TPLH+A +    +VV+LLL  GA   A    G TPLH+A+  G   +   L
Sbjct: 63  PNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLL 122
Query: 354 LQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVD 394
           L  GA P+T+   G TPL LA      ++V++L + G  ++
Sbjct: 123 LSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score =  102 bits (255), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 83/141 (58%)
Query: 561 LTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDH 620
           L E+GA + A+   G TPLHLAA+ G  ++ ++LL + A  +++  +G TPLH+A+   H
Sbjct: 23  LLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGH 82
Query: 621 QNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHL 680
           + V  LLL +GA P+A   +G TPLH+AA+    ++   LL   A PN     G TPL L
Sbjct: 83  KEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNTSDSDGRTPLDL 142
Query: 681 SAQEGHTDMSSLLIEHGATVS 701
           + + G+ ++  LL + G  + 
Sbjct: 143 AREHGNEEVVKLLEKQGGWLE 163

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 92.8 bits (229), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 75/138 (54%)
Query: 627 LLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGH 686
           LL+ GA  +A   +G TPLH+AA+    ++   LL   A PNA+   G TPLHL+A+ GH
Sbjct: 23  LLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGH 82
Query: 687 TDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHI 746
            ++  LL+  GA  + +  +G TPLHL A+     V  + +  GA+ +     G TPL +
Sbjct: 83  KEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNTSDSDGRTPLDL 142
Query: 747 ASHFGQLNMVRYLVENGA 764
           A   G   +V+ L + G 
Sbjct: 143 AREHGNEEVVKLLEKQGG 160

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 69/122 (56%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +A+ G+ D    L+E+GA V+    +G TPLHL A+     V  + +  GA+ +     G
Sbjct: 11  AAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDG 70
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
            TPLH+A+  G   +V+ L+  GA+ NA  + G TPLH A++ G   ++ LLL  GA PN
Sbjct: 71  KTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPN 130
Query: 801 AT 802
            +
Sbjct: 131 TS 132

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/126 (44%), Positives = 81/126 (64%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A      TPLH+A++ G+ +I  +LL++GA V+A    G
Sbjct: 21  AARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
            T LH++A  G  E+  +L + GA + A   +GFTPLHLAA  G ++I ++LL+  A V+
Sbjct: 81  ATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVN 140
Query: 553 SQGKVA 558
           +Q K  
Sbjct: 141 AQDKFG 146

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 80/141 (56%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
            Q     IL  +GA + AT   G TPLHLAAK G ++I ++LL+  A V++    G TPL
Sbjct: 25  GQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPL 84
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           H+A+   H  +  +LL  GA  +A    G+TPLH+AA    ++I   LL+Y A  NA+ K
Sbjct: 85  HLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDK 144
Query: 673 AGFTPLHLSAQEGHTDMSSLL 693
            G T   +S   G+ D++ +L
Sbjct: 145 FGKTAFDISIDNGNEDLAEIL 165

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 80/145 (55%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+  Q D    L+   A  NA    G TPLHL+A+ GH ++  +L+++GA V+     G
Sbjct: 21  AARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYG 80
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            TPLHL A    + +  + + +GA+++     GFTPLH+A++ G L +V  L++ GA+VN
Sbjct: 81  ATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVN 140
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLL 792
           A    G T    +   G   + ++L
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/124 (45%), Positives = 81/124 (65%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A      TPLH+A+R+G+ +I  +LL++GA V+A    G
Sbjct: 21  AARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
            T LH++AK G  E+  +L + GA + A    G TPLHLAA  G ++I ++LL+  A V+
Sbjct: 81  STPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVN 140
Query: 553 SQGK 556
           +Q K
Sbjct: 141 AQDK 144

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 79/140 (56%)
Query: 554 QGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLH 613
           Q     IL  +GA + A    G TPLHLAA+ G ++I ++LL+  A V++   +G TPLH
Sbjct: 26  QDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLH 85
Query: 614 VASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKA 673
           +A+   H  +  +LL  GA  +A    G TPLH+AA    ++I   LL+Y A  NA+ K 
Sbjct: 86  LAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKF 145
Query: 674 GFTPLHLSAQEGHTDMSSLL 693
           G T   +S   G+ D++ +L
Sbjct: 146 GKTAFDISIDNGNEDLAEIL 165

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 84/144 (58%)
Query: 582 AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNG 641
           AA+ G+    ++L+   A V+++   G TPLH+A+   H  +  +LL  GA  +A+  +G
Sbjct: 21  AARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSG 80
Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVS 701
            TPLH+AAK+  ++I   LL+Y A  NA+   G TPLHL+A  GH ++  +L+++GA V+
Sbjct: 81  STPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVN 140
Query: 702 HQAKNGLTPLHLCAQEDKVNVATI 725
            Q K G T   +       ++A I
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEI 164

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 89.7 bits (221), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +A+ G  D   +L+ +GA V+ +   G TPLHL A+   + +  + + NGA+++ +  +G
Sbjct: 21  AARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSG 80
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
            TPLH+A+  G L +V  L++ GA+VNA   +G TPLH A+  G + I+++LL  GA  N
Sbjct: 81  STPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVN 140
Query: 801 ATTNLFCCA-TILVKNGAE 818
           A       A  I + NG E
Sbjct: 141 AQDKFGKTAFDISIDNGNE 159

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 81/141 (57%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
            Q     IL  +GA + A    G TPLHL    G ++I ++LL+  A V++  K+G TPL
Sbjct: 25  GQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPL 84
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           H+A++  H  +  +LL  GA  +A+   GYTPLH+AA+   ++I   LL+Y A  NA+ K
Sbjct: 85  HLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDK 144
Query: 673 AGFTPLHLSAQEGHTDMSSLL 693
            G T   +S   G+ D++ +L
Sbjct: 145 FGKTAFDISIDNGNEDLAEIL 165

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 84/144 (58%)
Query: 582 AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNG 641
           AA+ G+    ++L+   A V++    G+TPLH+  +  H  +  +LL   A  +A  K+G
Sbjct: 21  AARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSG 80
Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVS 701
           +TPLH+AA +  ++I   LL+Y A  NA    G+TPLHL+A++GH ++  +L+++GA V+
Sbjct: 81  WTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVN 140
Query: 702 HQAKNGLTPLHLCAQEDKVNVATI 725
            Q K G T   +       ++A I
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEI 164

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +A+ G  D   +L+ +GA V+     G+TPLHL      + +  + +   A+++   K+G
Sbjct: 21  AARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSG 80
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
           +TPLH+A++ G L +V  L++ GA+VNA    GYTPLH A++ G + I+++LL  GA  N
Sbjct: 81  WTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVN 140
Query: 801 ATTNLFCCA-TILVKNGAE 818
           A       A  I + NG E
Sbjct: 141 AQDKFGKTAFDISIDNGNE 159

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score =  103 bits (256), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/124 (45%), Positives = 79/124 (63%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A      TPLH+A+  G+ +I  +LL+HGA VDA    G
Sbjct: 21  AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
           +T LH++A  G  E+  +L + GA + A    G TPLHLAA  G ++I ++LL+  A V+
Sbjct: 81  FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 553 SQGK 556
           +Q K
Sbjct: 141 AQDK 144

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 76/137 (55%)
Query: 554 QGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLH 613
           Q     IL  +GA + A    G TPLHLAA  G ++I ++LL+  A VD+    G TPLH
Sbjct: 26  QDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYGFTPLH 85
Query: 614 VASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKA 673
           +A+   H  +  +LL  GA  +A    G TPLH+AA +  ++I   LL+Y A  NA+ K 
Sbjct: 86  LAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVNAQDKF 145
Query: 674 GFTPLHLSAQEGHTDMS 690
           G T   +S   G+ D++
Sbjct: 146 GKTAFDISIDNGNEDLA 162

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +A+ G  D   +LI +GA V+     GLTPLHL A    + +  + + +GA++D     G
Sbjct: 21  AARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYG 80
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
           FTPLH+A+  G L +V  L++ GA+VNA    G TPLH A+ +G + I+++LL  GA  N
Sbjct: 81  FTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVN 140
Query: 801 ATTNLFCCA-TILVKNGAE 818
           A       A  I + NG E
Sbjct: 141 AQDKFGKTAFDISIDNGNE 159

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/124 (42%), Positives = 81/124 (65%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA  +A     +TPLH+A+ +G+ +I  +LL++GA V+A   +G
Sbjct: 9   AARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNG 68
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
            T LH++A  G  E+  +L + GA + A    G TPL+LAA +G ++I ++LL+  A V+
Sbjct: 69  TTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVN 128
Query: 553 SQGK 556
           +Q K
Sbjct: 129 AQDK 132

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 499 SAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
           +A+ GQD+   IL  +GA   A    G TPLH+AA  G ++I ++LL+            
Sbjct: 9   AARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLR------------ 56
Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY 618
                +GA + A    G TPLHLAA  G ++I ++LL+  A V+++   G+TPL++A+++
Sbjct: 57  -----NGADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYW 111
Query: 619 DHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTL 660
            H  +  +LL  GA  +A  K G T   I+      D+A  L
Sbjct: 112 GHLEIVEVLLKHGADVNAQDKFGKTAFDISIDIGNEDLAEIL 153

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 77/141 (54%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
            Q     IL  +GA   A    G TPLH+AA  G ++I ++LL+  A V++   NG TPL
Sbjct: 13  GQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPL 72
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           H+A+   H  +  +LL  GA  +A    G TPL++AA    ++I   LL++ A  NA+ K
Sbjct: 73  HLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDK 132
Query: 673 AGFTPLHLSAQEGHTDMSSLL 693
            G T   +S   G+ D++ +L
Sbjct: 133 FGKTAFDISIDIGNEDLAEIL 153

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 80/144 (55%)
Query: 582 AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNG 641
           AA+ G+    ++L+   A  ++    G TPLH+A+   H  +  +LL  GA  +AV  NG
Sbjct: 9   AARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNG 68
Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVS 701
            TPLH+AA    ++I   LL+Y A  NA+   G TPL+L+A  GH ++  +L++HGA V+
Sbjct: 69  TTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVN 128
Query: 702 HQAKNGLTPLHLCAQEDKVNVATI 725
            Q K G T   +       ++A I
Sbjct: 129 AQDKFGKTAFDISIDIGNEDLAEI 152

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 73/130 (56%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+  Q D    L+   A  NA    G TPLH++A  GH ++  +L+ +GA V+    NG
Sbjct: 9   AARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNG 68
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            TPLHL A    + +  + +  GA+++     G TPL++A+++G L +V  L+++GA+VN
Sbjct: 69  TTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVN 128
Query: 768 ATTNLGYTPL 777
           A    G T  
Sbjct: 129 AQDKFGKTAF 138

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score =  100 bits (248), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 80/141 (56%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
            Q     IL  +GA + AT   G TPLHLAA YG ++I ++LL+  A V++    G TPL
Sbjct: 25  GQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPL 84
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           H+A+   H  +  +LL  GA  +AV   G TPLH+AA    ++I   LL++ A  NA+ K
Sbjct: 85  HLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDK 144
Query: 673 AGFTPLHLSAQEGHTDMSSLL 693
            G T   +S   G+ D++ +L
Sbjct: 145 FGKTAFDISIDNGNEDLAEIL 165

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 82/144 (56%)
Query: 582 AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNG 641
           AA+ G+    ++L+   A V++   +G+TPLH+A+ Y H  +  +LL  GA  +A+   G
Sbjct: 21  AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVS 701
            TPLH+AA    ++I   LL++ A  NA    G TPLHL+A  GH ++  +L++HGA V+
Sbjct: 81  STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 702 HQAKNGLTPLHLCAQEDKVNVATI 725
            Q K G T   +       ++A I
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEI 164

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 76/138 (55%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+  Q D    L+   A  NA   +G TPLHL+A  GH ++  +L++HGA V+     G
Sbjct: 21  AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            TPLHL A    + +  + + +GA+++ V   G TPLH+A+  G L +V  L+++GA+VN
Sbjct: 81  STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 768 ATTNLGYTPLHQASQQGR 785
           A    G T    +   G 
Sbjct: 141 AQDKFGKTAFDISIDNGN 158

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +A+ G  D   +L+ +GA V+    +GLTPLHL A    + +  + + +GA+++ +   G
Sbjct: 21  AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXG 80
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
            TPLH+A+  G L +V  L+++GA+VNA    G TPLH A+  G + I+++LL  GA  N
Sbjct: 81  STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 801 ATTNLFCCA-TILVKNGAE 818
           A       A  I + NG E
Sbjct: 141 AQDKFGKTAFDISIDNGNE 159

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 99.4 bits (246), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 80/141 (56%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
            Q     IL  +GA + AT   G TPLHLAA YG ++I ++LL+  A V++    G TPL
Sbjct: 25  GQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPL 84
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           H+A+   H  +  +LL  GA  +AV   G TPLH+AA    ++I   LL++ A  NA+ K
Sbjct: 85  HLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDK 144
Query: 673 AGFTPLHLSAQEGHTDMSSLL 693
            G T   +S   G+ D++ +L
Sbjct: 145 FGKTAFDISIDNGNEDLAEIL 165

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 82/144 (56%)
Query: 582 AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNG 641
           AA+ G+    ++L+   A V++   +G+TPLH+A+ Y H  +  +LL  GA  +A+   G
Sbjct: 21  AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVS 701
            TPLH+AA    ++I   LL++ A  NA    G TPLHL+A  GH ++  +L++HGA V+
Sbjct: 81  STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 702 HQAKNGLTPLHLCAQEDKVNVATI 725
            Q K G T   +       ++A I
Sbjct: 141 AQDKFGKTAFDISIDNGNEDLAEI 164

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 89.7 bits (221), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 76/138 (55%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+  Q D    L+   A  NA   +G TPLHL+A  GH ++  +L++HGA V+     G
Sbjct: 21  AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            TPLHL A    + +  + + +GA+++ V   G TPLH+A+  G L +V  L+++GA+VN
Sbjct: 81  STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 768 ATTNLGYTPLHQASQQGR 785
           A    G T    +   G 
Sbjct: 141 AQDKFGKTAFDISIDNGN 158

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +A+ G  D   +L+ +GA V+    +GLTPLHL A    + +  + + +GA+++ +   G
Sbjct: 21  AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMG 80
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
            TPLH+A+  G L +V  L+++GA+VNA    G TPLH A+  G + I+++LL  GA  N
Sbjct: 81  STPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVN 140
Query: 801 ATTNLFCCA-TILVKNGAE 818
           A       A  I + NG E
Sbjct: 141 AQDKFGKTAFDISIDNGNE 159

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/124 (42%), Positives = 80/124 (64%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA + D VRIL+ NGA V+A      TPLH+A+  G+ +I  +LL++GA V+A    G
Sbjct: 21  AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
            T L ++A  G  E+  +L ++GA + A   +G TPLHLAA +G ++I ++LL+  A V+
Sbjct: 81  MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 553 SQGK 556
           +Q K
Sbjct: 141 AQDK 144

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 17/166 (10%)
Query: 499 SAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
           +A+ G+D+   IL  +GA + A    G+TPLHLAA  G ++I ++LL+            
Sbjct: 21  AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLK------------ 68
Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY 618
                +GA + A    G TPL LAA +G ++I ++LL+  A V++    G TPLH+A+ +
Sbjct: 69  -----NGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMF 123
Query: 619 DHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN 664
            H  +  +LL  GA  +A  K G T   I+      D+A  L + N
Sbjct: 124 GHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 95.9 bits (237), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +A+ G  D   +L+ +GA V+ +  +G TPLHL A    + +  + + NGA+++ V  AG
Sbjct: 21  AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
            TPL +A+ FG L +V  L++NGA+VNA    G+TPLH A+  G + I+++LL  GA  N
Sbjct: 81  MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140
Query: 801 ATTNLFCCA-TILVKNGAE 818
           A       A  I + NG E
Sbjct: 141 AQDKFGKTAFDISIDNGNE 159

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 92.4 bits (228), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/138 (40%), Positives = 76/138 (55%), Gaps = 26/138 (18%)
Query: 374 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLA 433
           AARA Q D VRIL+ NGA V+A  R                          +G TPLHLA
Sbjct: 21  AARAGQDDEVRILMANGADVNANDR--------------------------KGNTPLHLA 54
Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
           A  +  +IV +LL++GA V+A   +  TPLH+A+  G+ +I  +LL+HGA V+A  K G 
Sbjct: 55  ADYDHLEIVEVLLKHGADVNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGK 114
Query: 494 TALHISAKEGQDEVASIL 511
           TA  IS   G +++A IL
Sbjct: 115 TAFDISIDNGNEDLAEIL 132

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 68/112 (60%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A  R+  TPLH+A+   + +I  +LL+HGA V+A   DG
Sbjct: 21  AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
            T LH++A  G  E+  +L + GA + A  K G T   ++   G   +A++L
Sbjct: 81  STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 17/129 (13%)
Query: 499 SAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
           +A+ GQD+   IL  +GA + A  +KG TPLHLAA Y  ++I ++LL+            
Sbjct: 21  AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLK------------ 68
Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY 618
                 GA + A    G TPLHLAA +G ++I ++LL+  A V++Q K G T   ++   
Sbjct: 69  -----HGADVNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDN 123
Query: 619 DHQNVALLL 627
            ++++A +L
Sbjct: 124 GNEDLAEIL 132

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 61/111 (54%)
Query: 554 QGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLH 613
           Q     IL  +GA + A  +KG TPLHLAA Y  ++I ++LL+  A V++   +G TPLH
Sbjct: 26  QDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDGSTPLH 85
Query: 614 VASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN 664
           +A+ + H  +  +LL  GA  +A  K G T   I+      D+A  L + N
Sbjct: 86  LAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 136

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 63/112 (56%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +A+ G  D   +L+ +GA V+   + G TPLHL A  D + +  + + +GA+++     G
Sbjct: 21  AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLL 792
            TPLH+A+ FG L +V  L+++GA+VNA    G T    +   G   + ++L
Sbjct: 81  STPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 747 ASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN-- 804
           A+  GQ + VR L+ NGA+VNA    G TPLH A+    + I+++LL  GA  NA  N  
Sbjct: 21  AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDG 80
Query: 805 --------LFC---CATILVKNGAEIDPVTKL 825
                   LF       +L+K+GA+++   K 
Sbjct: 81  STPLHLAALFGHLEIVEVLLKHGADVNAQDKF 112

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 17/279 (6%)
Query: 431 HLAARANQ---TDIVRILLRNGASVDARARED-QTPLHVASRLGNGDIASLLLQHGASVD 486
           HL  +A Q    D+V+ LL  GA+V+ +  E   TPLH A ++   DI  LLL+HGA   
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 66
Query: 487 APTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
              K+G T   ++A  G  ++  +    GA +      GFT    AA YG++K  + L +
Sbjct: 67  LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK 126
Query: 547 KDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA----PVD 602
           + A V+ + K                K G T L  AA+ G +++ ++LL +        D
Sbjct: 127 RGANVNLRRKTKE-------DQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACD 179
Query: 603 SQGKNGVT-PLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLL 661
           + G+N +   L  +   D + +  LLLD GA  +   + G TPL +A +K  + +   LL
Sbjct: 180 NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL 239
Query: 662 EYN-AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT 699
           E    + N     G T L L+ +     ++ LL + GA+
Sbjct: 240 EQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 278

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 648 AAKKNQMDIATTLLEYNAKPN-AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN 706
           A +   +D+   LLE  A  N  E + G+TPLH + Q    D+  LL+ HGA    + KN
Sbjct: 12  AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 71
Query: 707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
           G TP  L A    V +  + +  GA+++     GFT    A+ +G++  +++L + GANV
Sbjct: 72  GATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 131
Query: 767 NATTNL----------GYTPLHQASQQGRVLIIDLLLGA-GAQPNATTNLFCCATI---L 812
           N               G T L  A+++G V ++ +LL   GA  NA  N+   A I   L
Sbjct: 132 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 191
Query: 813 VKNGAEIDPVTKLSDEH 829
             + ++++ +T L  +H
Sbjct: 192 SSDDSDVEAITHLLLDH 208

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 111/217 (51%), Gaps = 1/217 (0%)
Query: 287 LLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGC 346
           LL+R AD N   ++G T LH AC  +   +V+ L++ GA+I      G  PLH A+  G 
Sbjct: 59  LLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118
Query: 347 MNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILL-RNGASVDARAREDQTPLH 405
           ++IA +L+  GA        G+TPL +A      ++++  + R G  ++A  +E++  + 
Sbjct: 119 LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIML 178
Query: 406 VASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHV 465
             +R    S           G T LH+AA    T+++++L++    V+ +  +  TPLH 
Sbjct: 179 RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHA 238
Query: 466 ASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKE 502
           A+  G  +   +L+++   ++A  K G TA  ++ ++
Sbjct: 239 AAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED 275

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 14/246 (5%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           A  +  T+ V  LL  GA ++    +  T LH A    N D+   L+++GA+++ P  +G
Sbjct: 47  ACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEG 106
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK---DA 549
           +  LH +A  G  ++A  L   GA + A   +G TPL +A +    ++ Q  + +   D 
Sbjct: 107 WIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI 166
Query: 550 PVDSQGKVASILTESGASITAT-------TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 602
               + +   +L ++   + +         K G T LH+AA  G  ++ ++L+Q    V+
Sbjct: 167 EAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN 226
Query: 603 SQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLE 662
            +  +G TPLH A+H+  +    +L++      AV K G T   +A +    DI   L E
Sbjct: 227 IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE----DILGYLEE 282
Query: 663 YNAKPN 668
              K N
Sbjct: 283 LQKKQN 288

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 16/227 (7%)
Query: 561 LTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDH 620
           L E GA I      G T LH A     + + + L++  A ++     G  PLH A+   +
Sbjct: 59  LLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118
Query: 621 QNVALLLLDRGASPHAVAKNGYTPLHIAAKKN-----QMDIATTLLEYNAKPNAESKAGF 675
            ++A  L+ +GA   AV   G TPL IA ++      Q ++    ++  A    E +   
Sbjct: 119 LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIML 178
Query: 676 TPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDP 735
                    GH +           V H AK+G T LH+ A +    V  + +    +++ 
Sbjct: 179 RDARQWLNSGHIN----------DVRH-AKSGGTALHVAAAKGYTEVLKLLIQARYDVNI 227
Query: 736 VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQ 782
               G+TPLH A+H+G+    R LVEN  ++ A   +G T    A +
Sbjct: 228 KDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE 274

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 706 NGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN 765
           +G   L  C+  D   V  + +  GA+I+     G T LH A     ++MV++LVENGAN
Sbjct: 40  DGAVFLAACSSGDTEEVLRL-LERGADINYANVDGLTALHQACIDDNVDMVKFLVENGAN 98
Query: 766 VNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
           +N   N G+ PLH A+  G + I + L+  GA   A  
Sbjct: 99  INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVN 136

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 17/279 (6%)
Query: 431 HLAARANQ---TDIVRILLRNGASVDARARED-QTPLHVASRLGNGDIASLLLQHGASVD 486
           HL  +A Q    D+V+ LL  GA+V+ +  E   TPLH A ++   DI  LLL+HGA   
Sbjct: 27  HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 86
Query: 487 APTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
              K+G T   ++A  G  ++  +    GA +      GFT    AA YG++K  + L +
Sbjct: 87  LRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK 146
Query: 547 KDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA----PVD 602
           + A V+ + K                K G T L  AA+ G +++ ++LL +        D
Sbjct: 147 RGANVNLRRKTKE-------DQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACD 199
Query: 603 SQGKNG-VTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLL 661
           + G+N  +  L  +   D + +  LLLD GA  +   + G TPL +A +K  + +   LL
Sbjct: 200 NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL 259
Query: 662 EYN-AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT 699
           E    + N     G T L L+ +     ++ LL + GA+
Sbjct: 260 EQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 298

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 648 AAKKNQMDIATTLLEYNAKPN-AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN 706
           A +   +D+   LLE  A  N  E + G+TPLH + Q    D+  LL+ HGA    + KN
Sbjct: 32  AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN 91
Query: 707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
           G TP  L A    V +  + +  GA+++     GFT    A+ +G++  +++L + GANV
Sbjct: 92  GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 151
Query: 767 NATTNL----------GYTPLHQASQQGRVLIIDLLLGA-GAQPNATTNLFCCATI---L 812
           N               G T L  A+++G V ++ +LL   GA  NA  N+   A I   L
Sbjct: 152 NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 211
Query: 813 VKNGAEIDPVTKLSDEH 829
             + ++++ +T L  +H
Sbjct: 212 SSDDSDVEAITHLLLDH 228

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA 636
           TPLH AA Y R+ + + LLQ  A V ++ K G+ PLH A  Y H  VA LL+  GA  + 
Sbjct: 44  TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 103
Query: 637 VAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLL 693
                +TPLH AA K + +I   LL++ A P  +++ G TPL L  ++G TD+  LL
Sbjct: 104 ADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDL-VKDGDTDIQDLL 159

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 58/104 (55%)
Query: 643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSH 702
           TPLH AA  N++ +   LL++ A  +A+ K G  PLH +   GH +++ LL++HGA V+ 
Sbjct: 44  TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 103
Query: 703 QAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHI 746
                 TPLH  A + K  +  + + +GA+     + G TPL +
Sbjct: 104 ADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDL 147

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 56/108 (51%)
Query: 709 TPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNA 768
           TPLH  A  ++V+V    + +GA++    K G  PLH A  +G   +   LV++GA VN 
Sbjct: 44  TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 103
Query: 769 TTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCATILVKNG 816
                +TPLH+A+ +G+  I  LLL  GA P            LVK+G
Sbjct: 104 ADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDG 151

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA 636
           TPLH AA Y R+ + + LLQ  A V ++ K G+ PLH A  Y H  VA LL+  GA  + 
Sbjct: 48  TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 107
Query: 637 VAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLL 693
                +TPLH AA K + +I   LL++ A P  +++ G TPL L  ++G TD+  LL
Sbjct: 108 ADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDL-VKDGDTDIQDLL 163

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 56/108 (51%)
Query: 709 TPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNA 768
           TPLH  A  ++V+V    + +GA++    K G  PLH A  +G   +   LV++GA VN 
Sbjct: 48  TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 107
Query: 769 TTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCATILVKNG 816
                +TPLH+A+ +G+  I  LLL  GA P            LVK+G
Sbjct: 108 ADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDG 155

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA 636
           TPLH AA Y R+ + + LLQ  A V ++ K G+ PLH A  Y H  VA LL+  GA  + 
Sbjct: 46  TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 105
Query: 637 VAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLL 693
                +TPLH AA K + +I   LL++ A P  +++ G TPL L  ++G TD+  LL
Sbjct: 106 ADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDL-VKDGDTDIQDLL 161

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 58/104 (55%)
Query: 643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSH 702
           TPLH AA  N++ +   LL++ A  +A+ K G  PLH +   GH +++ LL++HGA V+ 
Sbjct: 46  TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 105
Query: 703 QAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHI 746
                 TPLH  A + K  +  + + +GA+     + G TPL +
Sbjct: 106 ADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDL 149

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 56/108 (51%)
Query: 709 TPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNA 768
           TPLH  A  ++V+V    + +GA++    K G  PLH A  +G   +   LV++GA VN 
Sbjct: 46  TPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV 105
Query: 769 TTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCATILVKNG 816
                +TPLH+A+ +G+  I  LLL  GA P            LVK+G
Sbjct: 106 ADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDG 153

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 82/171 (47%), Gaps = 27/171 (15%)
Query: 374 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLA 433
           AARA Q D VRIL+ NGA                              T   G +PLHLA
Sbjct: 9   AARAGQDDEVRILMANGAPF---------------------------TTDWLGTSPLHLA 41
Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
           A+        +LLR G S DAR + D+TPLH+A+  G+ +I  +LL+HGA V+A      
Sbjct: 42  AQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKM 101
Query: 494 TALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
           TALH + +    EV  +L + GA +   +K   T   ++   G   +A++L
Sbjct: 102 TALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 18/162 (11%)
Query: 499 SAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
           +A+ GQD+   IL  +GA  T T   G +PLHLAA+YG     ++LL+            
Sbjct: 9   AARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLR------------ 55
Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY 618
                +G S  A TK   TPLH+AA  G   I ++LL+  A V+++    +T LH A+ +
Sbjct: 56  -----AGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEH 110
Query: 619 DHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTL 660
           +HQ V  LL+  GA  H  +K   T   I+      D+A  L
Sbjct: 111 NHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 554 QGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLH 613
           Q     IL  +GA  T T   G +PLHLAA+YG     ++LL+     D++ K   TPLH
Sbjct: 14  QDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLH 72
Query: 614 VASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKA 673
           +A+   H N+  +LL  GA  +A      T LH A + N  ++   L++Y A  + +SK 
Sbjct: 73  MAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKF 132
Query: 674 GFTPLHLSAQEGHTDMSSLL 693
             T   +S   G+ D++ +L
Sbjct: 133 CKTAFDISIDNGNEDLAEIL 152

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 582 AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNG 641
           AA+ G+    ++L+   AP  +    G +PLH+A+ Y H +   +LL  G S  A  K  
Sbjct: 9   AARAGQDDEVRILMANGAPFTTDWL-GTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVS 701
            TPLH+AA +   +I   LL++ A  NA+     T LH + +  H ++  LLI++GA V 
Sbjct: 68  RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 702 HQAKNGLTPLHLCAQEDKVNVATI 725
            Q+K   T   +       ++A I
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEI 151

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +A+ G  D   +L+ +GA  +     G +PLHL AQ    +   + +  G   D  TK  
Sbjct: 9   AARAGQDDEVRILMANGAPFTTDWL-GTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVD 67
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
            TPLH+A+  G  N+V  L+++GA+VNA   L  T LH A++     +++LL+  GA  +
Sbjct: 68  RTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127
Query: 801 ATTNLFC--CATILVKNGAE 818
            T + FC     I + NG E
Sbjct: 128 -TQSKFCKTAFDISIDNGNE 146

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/138 (41%), Positives = 76/138 (55%), Gaps = 26/138 (18%)
Query: 374 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLA 433
           AARA Q D VRIL+ NGA V+A   ED+  L                       TPLHLA
Sbjct: 21  AARAGQDDEVRILMANGADVNA---EDKVGL-----------------------TPLHLA 54
Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
           A  +  +IV +LL+NGA V+A     +TPLH+ +  G+ +I  +LL+HGA V+A  K G 
Sbjct: 55  AMNDHLEIVEVLLKNGADVNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGK 114
Query: 494 TALHISAKEGQDEVASIL 511
           TA  IS   G +++A IL
Sbjct: 115 TAFDISIDNGNEDLAEIL 132

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 61/104 (58%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +A+ G  D   +L+ +GA V+ + K GLTPLHL A  D + +  + + NGA+++ +   G
Sbjct: 21  AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQG 784
            TPLH+ + +G L +V  L+++GA+VNA    G T    +   G
Sbjct: 81  ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNG 124

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 714 CAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLG 773
             Q+D+V    I M NGA+++   K G TPLH+A+    L +V  L++NGA+VNA   +G
Sbjct: 24  AGQDDEV---RILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 774 YTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCA-TILVKNGAE 818
            TPLH  +  G + I+++LL  GA  NA       A  I + NG E
Sbjct: 81  ETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 126

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 64/91 (70%)
Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
           G TPLHLAAR    ++V++LL  GA V+A+ +  +TPLH+A+R G+ ++  LLL+ GA V
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGA 516
           +A  K+G T LH++A+ G  EV  +L E+GA
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 85.9 bits (211), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 63/90 (70%)
Query: 460 QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASIT 519
           +TPLH+A+R G+ ++  LLL+ GA V+A  K+G T LH++A+ G  EV  +L E+GA + 
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62
Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDA 549
           A  K G TPLHLAA+ G +++ ++LL+  A
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 60/92 (65%)
Query: 607 NGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK 666
           NG TPLH+A+   H  V  LLL+ GA  +A  KNG TPLH+AA+   +++   LLE  A 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 667 PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
            NA+ K G TPLHL+A+ GH ++  LL+E GA
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 59/92 (64%)
Query: 640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT 699
           NG TPLH+AA+   +++   LLE  A  NA+ K G TPLHL+A+ GH ++  LL+E GA 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 700 VSHQAKNGLTPLHLCAQEDKVNVATITMFNGA 731
           V+ + KNG TPLHL A+   + V  + +  GA
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 60/91 (65%)
Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEI 733
           G TPLHL+A+ GH ++  LL+E GA V+ + KNG TPLHL A+   + V  + +  GA++
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGA 764
           +   K G TPLH+A+  G L +V+ L+E GA
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 79.3 bits (194), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 706 NGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN 765
           NG TPLHL A+   + V  + +  GA+++   K G TPLH+A+  G L +V+ L+E GA+
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 766 VNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
           VNA    G TPLH A++ G + ++ LLL AGA
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 114/250 (45%), Gaps = 8/250 (3%)
Query: 515 GASITATTKKGFTPLHLAA-KYGRMKIAQMLLQKDAPVDSQGKVASILTESGASI-TATT 572
           G  +      GFTPL +A+   G ++      ++DAP      V S     GAS+   T 
Sbjct: 1   GMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPA-----VISDFIYQGASLHNQTD 55
Query: 573 KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNV-ALLLLDRG 631
           + G T LHLAA+Y R   A+ LL+  A  + Q   G TPLH A   D Q V  +L+ +R 
Sbjct: 56  RTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 115
Query: 632 ASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSS 691
               A   +G TPL +AA+     +   L+  +A  NA    G + LH +A   + D + 
Sbjct: 116 TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAV 175
Query: 692 LLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG 751
           +L+++GA    Q     TPL L A+E     A + + + A  D        P  IA    
Sbjct: 176 VLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERM 235
Query: 752 QLNMVRYLVE 761
             ++VR L E
Sbjct: 236 HHDIVRLLDE 245

>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 38/251 (15%)
Query: 565 GASITATTKKGFTPLHLAA-KYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNV 623
           G  +      GFTPL +A+   G ++      ++DAP             V S + +Q  
Sbjct: 1   GMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPA------------VISDFIYQ-- 46
Query: 624 ALLLLDRGASPH-AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSA 682
                  GAS H    + G T LH+AA+ ++ D A  LLE +A  N +   G TPLH + 
Sbjct: 47  -------GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAV 99
Query: 683 QEGHTDMSSLLIEHGAT-VSHQAKNGLTPLHLCAQ-------EDKVNVATITMFNGAEID 734
                 +  +LI + AT +  +  +G TPL L A+       ED +N       + A+++
Sbjct: 100 SADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN-------SHADVN 152
Query: 735 PVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG 794
            V   G + LH A+    ++    L++NGAN +   N   TPL  A+++G      +LL 
Sbjct: 153 AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLD 212
Query: 795 AGAQPNATTNL 805
             A  + T ++
Sbjct: 213 HFANRDITDHM 223

>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 20/190 (10%)
Query: 640 NGYTPLHIAA----------KKNQMD----IATTLLEYNAKPNAESKAGFTPLHLSAQEG 685
           +G+TPL IA+           + + D    I+  + +  +  N   + G T LHL+A+  
Sbjct: 10  DGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYS 69
Query: 686 HTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGA-EIDPVTKAGFTPL 744
            +D +  L+E  A  + Q   G TPLH     D   V  I + N A ++D     G TPL
Sbjct: 70  RSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPL 129
Query: 745 HIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
            +A+      M+  L+ + A+VNA  +LG + LH A+    V    +LL  GA  +   N
Sbjct: 130 ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN 189
Query: 805 -----LFCCA 809
                LF  A
Sbjct: 190 REETPLFLAA 199

>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain Length = 253

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 111/238 (46%), Gaps = 8/238 (3%)
Query: 525 GFTPLHLAA-KYGRMKIAQMLLQKDAPVDSQGKVASILTESGASI-TATTKKGFTPLHLA 582
           GFTPL +A+   G ++      ++DAP      V S     GAS+   T + G T LHLA
Sbjct: 10  GFTPLMIASCSGGGLETGNSEEEEDAPA-----VISDFIYQGASLHNQTDRTGETALHLA 64
Query: 583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNV-ALLLLDRGASPHAVAKNG 641
           A+Y R   A+ LL+  A  + Q   G TPLH A   D Q V  +L+ +R     A   +G
Sbjct: 65  ARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDG 124
Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVS 701
            TPL +AA+     +   L+  +A  NA    G + LH +A   + D + +L+++GA   
Sbjct: 125 TTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD 184
Query: 702 HQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
            Q     TPL L A+E     A + + + A  D        P  IA      ++VR L
Sbjct: 185 MQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242

>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain Length = 253

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 601 VDSQGKNGVTPLHVAS-------------HYDHQNVALLLLDRGASPH-AVAKNGYTPLH 646
           V+ +G +G TPL +AS               D   V    + +GAS H    + G T LH
Sbjct: 3   VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALH 62
Query: 647 IAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT-VSHQAK 705
           +AA+ ++ D A  LLE +A  N +   G TPLH +       +  +LI + AT +  +  
Sbjct: 63  LAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH 122
Query: 706 NGLTPLHLCAQ-------EDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY 758
           +G TPL L A+       ED +N       + A+++ V   G + LH A+    ++    
Sbjct: 123 DGTTPLILAARLAVEGMLEDLIN-------SHADVNAVDDLGKSALHWAAAVNNVDAAVV 175
Query: 759 LVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNL 805
           L++NGAN +   N   TPL  A+++G      +LL   A  + T ++
Sbjct: 176 LLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHM 222

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 71/138 (51%), Gaps = 26/138 (18%)
Query: 374 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLA 433
           AARA Q D VRIL  NGA V+A                              G TPLHLA
Sbjct: 21  AARAGQDDEVRILTANGADVNA--------------------------NDYWGHTPLHLA 54
Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
           A     +IV +LL+NGA V+A     +TPLH+A+   + +I  +LL+HGA V+A  K G 
Sbjct: 55  AMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGK 114
Query: 494 TALHISAKEGQDEVASIL 511
           TA  IS   G +++A IL
Sbjct: 115 TAFDISIDNGNEDLAEIL 132

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 65/112 (58%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL  NGA V+A      TPLH+A+ LG+ +I  +LL++GA V+A    G
Sbjct: 21  AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
            T LH++A     E+  +L + GA + A  K G T   ++   G   +A++L
Sbjct: 81  RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 17/129 (13%)
Query: 499 SAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
           +A+ GQD+   ILT +GA + A    G TPLHLAA  G ++I ++LL+            
Sbjct: 21  AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLK------------ 68
Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY 618
                +GA + AT   G TPLHLAA    ++I ++LL+  A V++Q K G T   ++   
Sbjct: 69  -----NGADVNATGNTGRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDN 123
Query: 619 DHQNVALLL 627
            ++++A +L
Sbjct: 124 GNEDLAEIL 132

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 58/108 (53%)
Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPL 612
            Q     ILT +GA + A    G TPLHLAA  G ++I ++LL+  A V++ G  G TPL
Sbjct: 25  GQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPL 84
Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTL 660
           H+A+  DH  +  +LL  GA  +A  K G T   I+      D+A  L
Sbjct: 85  HLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Query: 714 CAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLG 773
             Q+D+V + T    NGA+++     G TPLH+A+  G L +V  L++NGA+VNAT N G
Sbjct: 24  AGQDDEVRILTA---NGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTG 80
Query: 774 YTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCA-TILVKNGAE 818
            TPLH A+    + I+++LL  GA  NA       A  I + NG E
Sbjct: 81  RTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 126

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 69/112 (61%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A   +  TPLH+A++LG+ +I  +LL++GA V+A    G
Sbjct: 21  AARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
            T LH++A  G  E+  +L + GA + A  K G T   ++   G   +A++L
Sbjct: 81  ITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 17/129 (13%)
Query: 499 SAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
           +A+ GQD+   IL  +GA + A  + G TPLHLAA+ G ++I ++LL+            
Sbjct: 21  AARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLK------------ 68
Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY 618
                 GA + A    G TPLHLAA  G ++I ++LL+  A V++Q K G T   ++   
Sbjct: 69  -----YGADVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDN 123
Query: 619 DHQNVALLL 627
            ++++A +L
Sbjct: 124 GNEDLAEIL 132

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 626 LLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEG 685
           +L+  GA  +A+ ++G TPLH+AA+   ++I   LL+Y A  NAE   G TPLHL+A  G
Sbjct: 32  ILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAIRG 91
Query: 686 HTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATI 725
           H ++  +L++HGA V+ Q K G T   +       ++A I
Sbjct: 92  HLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEI 131

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
Query: 714 CAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLG 773
             Q+D+V    I M NGA+++ + + G TPLH+A+  G L +V  L++ GA+VNA  N G
Sbjct: 24  AGQDDEV---RILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFG 80
Query: 774 YTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCA-TILVKNGAE 818
            TPLH A+ +G + I+++LL  GA  NA       A  I + NG E
Sbjct: 81  ITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 126

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 76/138 (55%), Gaps = 26/138 (18%)
Query: 374 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLA 433
           A RA Q D VRIL+ NGA V+A                    A         G TPLHLA
Sbjct: 21  ATRAGQDDEVRILMANGADVNA-----------------MDDA---------GVTPLHLA 54
Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
           A+    +IV +LL++GA V+AR    +TPLH+A+ +G+ +I  +LL++GA V+A  K G 
Sbjct: 55  AKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGK 114
Query: 494 TALHISAKEGQDEVASIL 511
           TA  IS   G +++A IL
Sbjct: 115 TAFDISIDNGNEDLAEIL 132

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 66/112 (58%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           A RA Q D VRIL+ NGA V+A      TPLH+A++ G+ +I  +LL+HGA V+A    G
Sbjct: 21  ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
            T LH++A  G  E+  +L E GA + A  K G T   ++   G   +A++L
Sbjct: 81  RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 17/129 (13%)
Query: 499 SAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
           + + GQD+   IL  +GA + A    G TPLHLAAK G ++I ++LL+            
Sbjct: 21  ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLK------------ 68
Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY 618
                 GA + A    G TPLHLAA  G ++I ++LL+  A V++Q K G T   ++   
Sbjct: 69  -----HGADVNARDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDN 123
Query: 619 DHQNVALLL 627
            ++++A +L
Sbjct: 124 GNEDLAEIL 132

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 714 CAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLG 773
             Q+D+V    I M NGA+++ +  AG TPLH+A+  G L +V  L+++GA+VNA    G
Sbjct: 24  AGQDDEVR---ILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWG 80
Query: 774 YTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCA-TILVKNGAE 818
            TPLH A+  G + I+++LL  GA  NA       A  I + NG E
Sbjct: 81  RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNE 126

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 74/138 (53%), Gaps = 26/138 (18%)
Query: 374 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLA 433
           AARA Q D VRIL+ NGA V+A+                             G TPL+LA
Sbjct: 21  AARAGQDDEVRILMANGADVNAKDE--------------------------YGLTPLYLA 54
Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
                 +IV +LL+NGA V+A      TPLH+A+ +G+ +IA +LL+HGA V+A  K G 
Sbjct: 55  TAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGK 114
Query: 494 TALHISAKEGQDEVASIL 511
           TA  IS   G +++A IL
Sbjct: 115 TAFDISIGNGNEDLAEIL 132

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 69/112 (61%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A+     TPL++A+  G+ +I  +LL++GA V+A    G
Sbjct: 21  AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
           +T LH++A  G  E+A +L + GA + A  K G T   ++   G   +A++L
Sbjct: 81  FTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 17/129 (13%)
Query: 499 SAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
           +A+ GQD+   IL  +GA + A  + G TPL+LA  +G ++I ++LL+            
Sbjct: 21  AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLK------------ 68
Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY 618
                +GA + A    GFTPLHLAA  G ++IA++LL+  A V++Q K G T   ++   
Sbjct: 69  -----NGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGN 123
Query: 619 DHQNVALLL 627
            ++++A +L
Sbjct: 124 GNEDLAEIL 132

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 68/112 (60%)
Query: 582 AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNG 641
           AA+ G+    ++L+   A V+++ + G+TPL++A+ + H  +  +LL  GA  +AV   G
Sbjct: 21  AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIG 80
Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLL 693
           +TPLH+AA    ++IA  LL++ A  NA+ K G T   +S   G+ D++ +L
Sbjct: 81  FTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 57/97 (58%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +A+ G  D   +L+ +GA V+ + + GLTPL+L      + +  + + NGA+++ V   G
Sbjct: 21  AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIG 80
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPL 777
           FTPLH+A+  G L +   L+++GA+VNA    G T  
Sbjct: 81  FTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAF 117

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 714 CAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLG 773
             Q+D+V    I M NGA+++   + G TPL++A+  G L +V  L++NGA+VNA   +G
Sbjct: 24  AGQDDEVR---ILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIG 80
Query: 774 YTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCA-TILVKNGAE 818
           +TPLH A+  G + I ++LL  GA  NA       A  I + NG E
Sbjct: 81  FTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNE 126

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 110/238 (46%), Gaps = 8/238 (3%)
Query: 525 GFTPLHLAA-KYGRMKIAQMLLQKDAPVDSQGKVASILTESGASI-TATTKKGFTPLHLA 582
           GFTPL +A+   G ++      ++DAP      V S     GAS+   T + G T LHLA
Sbjct: 10  GFTPLMIASCSGGGLETGNSEEEEDAPA-----VISDFIYQGASLHNQTDRTGATALHLA 64
Query: 583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNV-ALLLLDRGASPHAVAKNG 641
           A Y R   A+ LL+  A  + Q   G TPLH A   D Q V  +L+ +R     A   +G
Sbjct: 65  AAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDG 124
Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVS 701
            TPL +AA+     +   L+  +A  NA    G + LH +A   + D + +L+++GA   
Sbjct: 125 TTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD 184
Query: 702 HQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
            Q     TPL L A+E     A + + + A  D        P  IA      ++VR L
Sbjct: 185 MQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 601 VDSQGKNGVTPLHVAS-------------HYDHQNVALLLLDRGASPH-AVAKNGYTPLH 646
           V+ +G +G TPL +AS               D   V    + +GAS H    + G T LH
Sbjct: 3   VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGATALH 62
Query: 647 IAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT-VSHQAK 705
           +AA  ++ D A  LLE +A  N +   G TPLH +       +  +LI + AT +  +  
Sbjct: 63  LAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH 122
Query: 706 NGLTPLHLCAQ-------EDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY 758
           +G TPL L A+       ED +N       + A+++ V   G + LH A+    ++    
Sbjct: 123 DGTTPLILAARLAVEGMLEDLIN-------SHADVNAVDDLGKSALHWAAAVNNVDAAVV 175
Query: 759 LVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNL 805
           L++NGAN +   N   TPL  A+++G      +LL   A  + T ++
Sbjct: 176 LLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHM 222

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 26/138 (18%)
Query: 374 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLA 433
           A RA Q D VRIL+ NGA  D  A +D                         G TPLHLA
Sbjct: 21  ATRAGQDDEVRILMANGA--DVNAMDDA------------------------GVTPLHLA 54
Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
           A+    +IV +LL++GA V+A     +TPLH+A+ +G+ +I  +LL++GA V+A  K G 
Sbjct: 55  AKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGK 114
Query: 494 TALHISAKEGQDEVASIL 511
           TA  IS   G +++A IL
Sbjct: 115 TAFDISIDNGNEDLAEIL 132

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 66/112 (58%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           A RA Q D VRIL+ NGA V+A      TPLH+A++ G+ +I  +LL+HGA V+A    G
Sbjct: 21  ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
            T LH++A  G  E+  +L E GA + A  K G T   ++   G   +A++L
Sbjct: 81  RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 17/129 (13%)
Query: 499 SAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
           + + GQD+   IL  +GA + A    G TPLHLAAK G ++I ++LL+            
Sbjct: 21  ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKH----------- 69
Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY 618
                 GA + A+   G TPLHLAA  G ++I ++LL+  A V++Q K G T   ++   
Sbjct: 70  ------GADVNASDSWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDN 123
Query: 619 DHQNVALLL 627
            ++++A +L
Sbjct: 124 GNEDLAEIL 132

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
Query: 714 CAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLG 773
             Q+D+V    I M NGA+++ +  AG TPLH+A+  G L +V  L+++GA+VNA+ + G
Sbjct: 24  AGQDDEVR---ILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWG 80
Query: 774 YTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCA-TILVKNGAE 818
            TPLH A+  G + I+++LL  GA  NA       A  I + NG E
Sbjct: 81  RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNE 126

>pdb|3LJN|A Chain A, Ankyrin Repeat Protein From Leishmania Major Length = 364

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 14/250 (5%)
Query: 305 LHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTAT 364
           +H+A +K +   V  L++ G S       G T LH+A   GC++ A +L   G     + 
Sbjct: 24  IHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV--HSL 81
Query: 365 VRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRV 424
             G+ P+HLA  AN+TD+V + L  GA    R +  ++ L+      R  +   S +   
Sbjct: 82  WHGQKPIHLAVXANKTDLV-VALVEGAK--ERGQXPESLLNECD--EREVNEIGSHVKHC 136
Query: 425 RGETPLHLAA--RANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
           +G+T LH          + ++IL++ GAS  A+ + D+TPL  A    N +   L     
Sbjct: 137 KGQTALHWCVGLGPEYLEXIKILVQLGASPTAKDKADETPLXRAXEFRNREALDLXXDTV 196
Query: 483 AS-----VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGR 537
            S     +D   K G + LH +     ++VA    E G  +     +   PL+L+ +   
Sbjct: 197 PSKSSLRLDYANKQGNSHLHWAILINWEDVAXRFVEXGIDVNXEDNEHTVPLYLSVRAAX 256
Query: 538 MKIAQMLLQK 547
           + + + LLQK
Sbjct: 257 VLLTKELLQK 266

>pdb|3LJN|A Chain A, Ankyrin Repeat Protein From Leishmania Major Length = 364

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 19/252 (7%)
Query: 458 EDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGAS 517
           E+   +HVA+R G  D    L++ G S     + G TALH++ K G  + A  L   G  
Sbjct: 19  ENXEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGE- 77
Query: 518 ITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKV-ASILTESGA----SITATT 572
              +   G  P+HLA    +  +   L++       +G+   S+L E        I +  
Sbjct: 78  -VHSLWHGQKPIHLAVXANKTDLVVALVEG---AKERGQXPESLLNECDEREVNEIGSHV 133
Query: 573 K--KGFTPLHLAAKYG--RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLL 628
           K  KG T LH     G   ++  ++L+Q  A   ++ K   TPL  A  + ++    L  
Sbjct: 134 KHCKGQTALHWCVGLGPEYLEXIKILVQLGASPTAKDKADETPLXRAXEFRNREALDLXX 193
Query: 629 DRGASPHAVA-----KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQ 683
           D   S  ++      K G + LH A   N  D+A   +E     N E      PL+LS +
Sbjct: 194 DTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAXRFVEXGIDVNXEDNEHTVPLYLSVR 253
Query: 684 EGHTDMSSLLIE 695
                ++  L++
Sbjct: 254 AAXVLLTKELLQ 265

>pdb|3LJN|A Chain A, Ankyrin Repeat Protein From Leishmania Major Length = 364

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 120/328 (36%), Gaps = 68/328 (20%)
Query: 496 LHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG 555
           +H++A++GQ +    L E+G S T   + G T LHLA K+G +  A+ L        S G
Sbjct: 24  IHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLA-------SVG 76
Query: 556 KVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVA 615
           +V S+              G  P+HLA    +  +   L      V+   + G  P  + 
Sbjct: 77  EVHSLW------------HGQKPIHLAVXANKTDLVVAL------VEGAKERGQXPESLL 118
Query: 616 SHYDHQNVALLLLDRGASPHAVAKNGYTPLH--IAAKKNQMDIATTLLEYNAKPNAESKA 673
           +  D + V  +        H     G T LH  +      ++    L++  A P A+ KA
Sbjct: 119 NECDEREVNEI------GSHVKHCKGQTALHWCVGLGPEYLEXIKILVQLGASPTAKDKA 172
Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEI 733
             TPL  + +  + +   L  +                            T+   +   +
Sbjct: 173 DETPLXRAXEFRNREALDLXXD----------------------------TVPSKSSLRL 204
Query: 734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
           D   K G + LH A      ++    VE G +VN   N    PL+ + +   VL+   LL
Sbjct: 205 DYANKQGNSHLHWAILINWEDVAXRFVEXGIDVNXEDNEHTVPLYLSVRAAXVLLTKELL 264
Query: 794 GAGAQPNATTNLFCCATILVKNGAEIDP 821
                    T++F        NG  + P
Sbjct: 265 -------QKTDVFLIQACPYHNGTTVLP 285

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 61/97 (62%)
Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
           G TPLH AA+    + V+ LL  GA V+AR+++  TPLH+A++ G+ +I  LLL  GA V
Sbjct: 9   GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV 68
Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATT 522
           +A +KDG T  H++ K G  E+  +L   GA + A +
Sbjct: 69  NARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 61/99 (61%)
Query: 456 AREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESG 515
           +++  TPLH A++ G+ +    LL  GA V+A +KDG T LH++AK G  E+  +L   G
Sbjct: 6   SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65
Query: 516 ASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQ 554
           A + A +K G TP HLA K G  +I ++L  K A V+++
Sbjct: 66  ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNAR 104

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 17/116 (14%)
Query: 489 TKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD 548
           +KDG T LH +AK G  E    L   GA + A +K G TPLHLAAK G  +I ++LL K 
Sbjct: 6   SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK- 64
Query: 549 APVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQ 604
                           GA + A +K G TP HLA K G  +I ++L  K A V+++
Sbjct: 65  ----------------GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNAR 104

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 59/100 (59%)
Query: 671 SKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNG 730
           SK G TPLH +A+ GH +    L+  GA V+ ++K+G TPLHL A+     +  + +  G
Sbjct: 6   SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65
Query: 731 AEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATT 770
           A+++  +K G TP H+A   G   +V+ L   GA+VNA +
Sbjct: 66  ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%)
Query: 704 AKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENG 763
           +K+G TPLH  A+          +  GA+++  +K G TPLH+A+  G   +V+ L+  G
Sbjct: 6   SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65
Query: 764 ANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
           A+VNA +  G TP H A + G   I+ LL   GA  NA +
Sbjct: 66  ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 26/138 (18%)
Query: 374 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLA 433
           A RA Q D VRIL+ NGA  D  A +D                         G TPLHLA
Sbjct: 21  ATRAGQDDEVRILMANGA--DVNAMDDA------------------------GVTPLHLA 54
Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
           A+    +IV +LL++GA V+A     +TPLH+A+ +G+ +I  +LL++GA V+A  K G 
Sbjct: 55  AKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGK 114
Query: 494 TALHISAKEGQDEVASIL 511
           TA  IS   G +++A IL
Sbjct: 115 TAFDISIDNGNEDLAEIL 132

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 66/112 (58%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           A RA Q D VRIL+ NGA V+A      TPLH+A++ G+ +I  +LL+HGA V+A    G
Sbjct: 21  ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
            T LH++A  G  E+  +L E GA + A  K G T   ++   G   +A++L
Sbjct: 81  RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 17/129 (13%)
Query: 499 SAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
           + + GQD+   IL  +GA + A    G TPLHLAAK G ++I ++LL+            
Sbjct: 21  ATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKH----------- 69
Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY 618
                 GA + A+   G TPLHLAA  G ++I ++LL+  A V++Q K G T   ++   
Sbjct: 70  ------GADVNASDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDN 123
Query: 619 DHQNVALLL 627
            ++++A +L
Sbjct: 124 GNEDLAEIL 132

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
Query: 714 CAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLG 773
             Q+D+V    I M NGA+++ +  AG TPLH+A+  G L +V  L+++GA+VNA+   G
Sbjct: 24  AGQDDEVR---ILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWG 80
Query: 774 YTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCA-TILVKNGAE 818
            TPLH A+  G + I+++LL  GA  NA       A  I + NG E
Sbjct: 81  RTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNE 126

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 81/153 (52%)
Query: 601 VDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTL 660
           V+   ++G +PLHVA+ +   ++  LLL  GA+  A   +   PLH+A ++    +   L
Sbjct: 79  VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCL 138
Query: 661 LEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKV 720
           L+ NAKPN +  +G TPL  +   GH ++ +LL++HGA+++     G T LH    E  V
Sbjct: 139 LDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHV 198
Query: 721 NVATITMFNGAEIDPVTKAGFTPLHIASHFGQL 753
            V  + + +GA +  + K   T +  A    ++
Sbjct: 199 FVVELLLLHGASVQVLNKRQRTAVDCAEQNSKI 231

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 72/130 (55%)
Query: 668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM 727
           N  S+ G +PLH++A  G  D+  LL++HGA    +  +   PLHL  Q+    V    +
Sbjct: 80  NVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLL 139
Query: 728 FNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVL 787
            + A+ +    +G TPL  A   G   +V  L+++GA++NA+ N G T LH+A  +  V 
Sbjct: 140 DSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVF 199
Query: 788 IIDLLLGAGA 797
           +++LLL  GA
Sbjct: 200 VVELLLLHGA 209

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 729 NGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLI 788
           +G  ++  ++ G +PLH+A+  G+ +++  L+++GAN  A       PLH A QQG   +
Sbjct: 75  SGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQV 134
Query: 789 IDLLLGAGAQPNA------TTNLFCCA-------TILVKNGAEID 820
           +  LL + A+PN       T  ++ C+        +L+++GA I+
Sbjct: 135 VKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASIN 179

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 43/248 (17%)
Query: 93  LNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGA 152
           ++ ++P++ AA   H   +R L+S+G    + T  +++PLH AC  G ++ V++L+  GA
Sbjct: 1   MSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGA 60
Query: 153 NIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRV 212
            +   T D  TPL  A  SG  + +++L++ GA++  ++    +P+H A++  H      
Sbjct: 61  QVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA-SPIHEAARRGHVECVNS 119
Query: 213 LIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNR 272
           LI +G  +D          H  SH G                       TPL++AC+  +
Sbjct: 120 LIAYGGNID----------HKISHLG-----------------------TPLYLACENQQ 146
Query: 273 YKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTE 332
                       K LL+  AD N +     +PLH   +    ++  LL+ +GA   A   
Sbjct: 147 RA--------CVKKLLESGADVN-QGKGQDSPLHAVARTASEELACLLMDFGADTQAKNA 197
Query: 333 SGLTPLHV 340
            G  P+ +
Sbjct: 198 EGKRPVEL 205

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 21/241 (8%)
Query: 428 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDA 487
           +P+H AA       +R L+  G +V+    +  +PLH A   G+     +LL+HGA V+ 
Sbjct: 5   SPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG 64
Query: 488 PTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 547
            T D +T L  +   G  +  ++L + GAS+   +    +P+H AA+ G ++    L+  
Sbjct: 65  VTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA-SPIHEAARRGHVECVNSLIAY 123
Query: 548 DAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKN 607
              +D +      ++  G           TPL+LA +  +    + LL+  A V+ QGK 
Sbjct: 124 GGNIDHK------ISHLG-----------TPLYLACENQQRACVKKLLESGADVN-QGKG 165
Query: 608 GVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKP 667
             +PLH  +    + +A LL+D GA   A    G  P+ +   ++ +  A   LE    P
Sbjct: 166 QDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPL--AQLFLEREGPP 223
Query: 668 N 668
           +
Sbjct: 224 S 224

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Query: 576 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPH 635
           ++P+H AA +G     + L+ +   V+    + V+PLH A    H +   +LL  GA  +
Sbjct: 4   WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN 63
Query: 636 AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIE 695
            V  + +TPL  A      D    LL++ A    ES    +P+H +A+ GH +  + LI 
Sbjct: 64  GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA-SPIHEAARRGHVECVNSLIA 122
Query: 696 HGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNM 755
           +G  + H+  +  TPL+L  +  +       + +GA+++   K   +PLH  +      +
Sbjct: 123 YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEEL 181
Query: 756 VRYLVENGANVNATTNLGYTPL 777
              L++ GA+  A    G  P+
Sbjct: 182 ACLLMDFGADTQAKNAEGKRPV 203

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 675 FTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID 734
           ++P+H +A  GH      LI  G  V+    + ++PLH       ++   I + +GA+++
Sbjct: 4   WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN 63
Query: 735 PVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG 794
            VT    TPL  A   G  + V  L+++GA+V   ++L  +P+H+A+++G V  ++ L+ 
Sbjct: 64  GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA-SPIHEAARRGHVECVNSLIA 122
Query: 795 AGA 797
            G 
Sbjct: 123 YGG 125

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
           ++P+H A+  G    +R L+  G  VN  T    +PLH+A   G +  + +LL  GAQ N
Sbjct: 4   WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN 63
Query: 801 AT-----TNLF--C------CATILVKNGAEIDPVTKLS 826
                  T LF  C      C  +L+++GA + P + L+
Sbjct: 64  GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA 102

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 43/249 (17%)
Query: 92  SLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKG 151
           +++ ++P++ AA   H   +R L+S+G    + T  +++PLH AC  G ++ V++L+  G
Sbjct: 56  AVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHG 115
Query: 152 ANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATR 211
           A +   T D  TPL  A  SG  + +++L++ GA++  ++ +  +P+H A++  H     
Sbjct: 116 AQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVN 174
Query: 212 VLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKN 271
            LI +G  +D          H  SH G                       TPL++AC+  
Sbjct: 175 SLIAYGGNID----------HKISHLG-----------------------TPLYLACENQ 201
Query: 272 RYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATT 331
           +            K LL+  AD N +     +PLH   +    ++  LL+ +GA   A  
Sbjct: 202 QRA--------CVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKN 252
Query: 332 ESGLTPLHV 340
             G  P+ +
Sbjct: 253 AEGKRPVEL 261

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 16/231 (6%)
Query: 298 ALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAG 357
           A++ ++P+H A        +  L+  G ++   T   ++PLH A   G ++    LL+ G
Sbjct: 56  AVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHG 115
Query: 358 AAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSAS 417
           A  +  T    TPL  A  +   D V +LL++GASV   + +  +P+H A+  RR     
Sbjct: 116 AQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAA--RRGHVEC 172
Query: 418 QSALTRVRGE---------TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR 468
            ++L    G          TPL+LA    Q   V+ LL +GA V+    +D +PLH   R
Sbjct: 173 VNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQD-SPLHAVVR 231
Query: 469 LGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTE-SGASI 518
             + ++A LL+  GA   A   +G   + +   E    +A +  E  GAS+
Sbjct: 232 TASEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPLAQLFLEREGASL 280

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 19/231 (8%)
Query: 424 VRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGA 483
           V   +P+H AA       +R L+  G +V+    +  +PLH A   G+     +LL+HGA
Sbjct: 57  VSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGA 116
Query: 484 SVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQM 543
            V+  T D +T L  +   G  +  ++L + GAS+   +    +P+H AA+ G ++    
Sbjct: 117 QVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA-SPIHEAARRGHVECVNS 175
Query: 544 LLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS 603
           L+     +D   K++ +                TPL+LA +  +    + LL+  A V+ 
Sbjct: 176 LIAYGGNIDH--KISHL---------------GTPLYLACENQQRACVKKLLESGADVN- 217
Query: 604 QGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQM 654
           QGK   +PLH       + +A LL+D GA   A    G  P+ +   ++ +
Sbjct: 218 QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPL 268

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Query: 576 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPH 635
           ++P+H AA +G     + L+ +   V+    + V+PLH A    H +   +LL  GA  +
Sbjct: 60  WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN 119
Query: 636 AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIE 695
            V  + +TPL  A      D    LL++ A    ES    +P+H +A+ GH +  + LI 
Sbjct: 120 GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA-SPIHEAARRGHVECVNSLIA 178
Query: 696 HGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNM 755
           +G  + H+  +  TPL+L  +  +       + +GA+++   K   +PLH         +
Sbjct: 179 YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEEL 237
Query: 756 VRYLVENGANVNATTNLGYTPL 777
              L++ GA+  A    G  P+
Sbjct: 238 ACLLMDFGADTQAKNAEGKRPV 259

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 675 FTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID 734
           ++P+H +A  GH      LI  G  V+    + ++PLH       ++   I + +GA+++
Sbjct: 60  WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN 119
Query: 735 PVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG 794
            VT    TPL  A   G  + V  L+++GA+V   ++L  +P+H+A+++G V  ++ L+ 
Sbjct: 120 GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA-SPIHEAARRGHVECVNSLIA 178
Query: 795 AGA 797
            G 
Sbjct: 179 YGG 181

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
           ++P+H A+  G    +R L+  G  VN  T    +PLH+A   G +  + +LL  GAQ N
Sbjct: 60  WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN 119
Query: 801 AT-----TNLF--C------CATILVKNGAEIDPVTKLS 826
                  T LF  C      C  +L+++GA + P + L+
Sbjct: 120 GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLA 158

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 114/240 (47%), Gaps = 6/240 (2%)
Query: 525 GFTPLHLAA-KYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKK-GFTPLHLA 582
           G TPL +AA + G +   + +   +   DS  +V S L   GA + AT  K G T LHLA
Sbjct: 2   GLTPLMIAAVRGGGLDTGEDIENNE---DSTAQVISDLLAQGAELNATMDKTGETSLHLA 58
Query: 583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNV-ALLLLDRGASPHAVAKNG 641
           A++ R   A+ LL   A  +SQ   G TPLH A   D   V  +LL +R  + +A   +G
Sbjct: 59  ARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDG 118
Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVS 701
            TPL +AA+     +   L+  +A  NA   +G T LH +A   +T+  ++L+ H A   
Sbjct: 119 TTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRD 178
Query: 702 HQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE 761
            Q     TPL L A+E     +   + N A  +        P  +AS     ++VR L E
Sbjct: 179 AQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDE 238

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 101/235 (42%), Gaps = 17/235 (7%)
Query: 575 GFTPLHLAAKYG---------------RMKIAQMLLQKDAPVD-SQGKNGVTPLHVASHY 618
           G TPL +AA  G                 ++   LL + A ++ +  K G T LH+A+ +
Sbjct: 2   GLTPLMIAAVRGGGLDTGEDIENNEDSTAQVISDLLAQGAELNATMDKTGETSLHLAARF 61
Query: 619 DHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKP-NAESKAGFTP 677
              + A  LLD GA  ++    G TPLH A   + M +   LL   A   NA    G TP
Sbjct: 62  ARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTP 121
Query: 678 LHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVT 737
           L L+A+     M   LI   A ++    +G T LH  A  +      I + + A  D   
Sbjct: 122 LILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQD 181
Query: 738 KAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLL 792
               TPL +A+  G     + L++N AN   T ++   P   AS++    I+ LL
Sbjct: 182 DKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 236

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 78/170 (45%), Gaps = 17/170 (10%)
Query: 641 GYTPLHIAAKK-----------NQMD----IATTLLEYNAKPNAE-SKAGFTPLHLSAQE 684
           G TPL IAA +           N  D    + + LL   A+ NA   K G T LHL+A+ 
Sbjct: 2   GLTPLMIAAVRGGGLDTGEDIENNEDSTAQVISDLLAQGAELNATMDKTGETSLHLAARF 61
Query: 685 GHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGA-EIDPVTKAGFTP 743
              D +  L++ GA  + Q   G TPLH     D + V  I + N A  ++     G TP
Sbjct: 62  ARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTP 121
Query: 744 LHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
           L +A+      MV  L+   A++NA  N G T LH A+       +++LL
Sbjct: 122 LILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILL 171

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 12/240 (5%)
Query: 569 TATTKKGFTPLHLAAKYGRM----KIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVA 624
           T   + G TPLH+A   G +    ++  +  Q    +D       TPLH+A      +V 
Sbjct: 3   TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVV 62
Query: 625 LLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKA----GFTPLHL 680
            LL+  GASP A+ ++G T  H+A +         LL+  A    + +A    G T LH+
Sbjct: 63  RLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHV 122
Query: 681 SAQEGHTDMSSLLIEHGATVSH-QAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKA 739
           +      +   LL+E GA +     K+G +PL    + + +++  + + +GA ++    +
Sbjct: 123 AVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYS 182
Query: 740 GFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP 799
           G + LH AS  G L +VR LV +GA+ +       TPL  A  +    +ID+L G   +P
Sbjct: 183 GSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRR---VIDILRGKATRP 239

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE----SKAGFTPLHLSAQEGHTDMSSLLI 694
           ++G TPLHIA  +  +     L+    +   E    +    TPLHL+       +  LL+
Sbjct: 7   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV 66
Query: 695 EHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGA-----EIDPVTKAGFTPLHIASH 749
             GA+     ++G T  HL A E +       + + A     +++     G T LH+A +
Sbjct: 67  TAGASPMALDRHGQTAAHL-ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 125
Query: 750 FGQLNMVRYLVENGANVNAT-TNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA 801
                 V+ L+E GA+++A     G +PL  A +   + ++ LLL  GA  NA
Sbjct: 126 TECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA 178

>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain Length = 210

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 96/209 (45%), Gaps = 2/209 (0%)
Query: 555 GKVASILTESGASI-TATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLH 613
           G V S     GAS+   T + G T LHLAA+Y R   A+ LL+  A    Q   G TPLH
Sbjct: 1   GSVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLH 60
Query: 614 VASHYDHQNV-ALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
            A   D Q V  +LL +R     A   +G TPL +AA+     +   L+  +A  NA   
Sbjct: 61  AAVSADAQGVFQILLRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDD 120
Query: 673 AGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAE 732
            G + LH +A   + D + +L+++GA    Q     TPL L A+E     A + + + A 
Sbjct: 121 LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFAN 180
Query: 733 IDPVTKAGFTPLHIASHFGQLNMVRYLVE 761
            D        P  IA      ++VR L E
Sbjct: 181 RDITDHMDRLPRDIAQERMHHDIVRLLDE 209

>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain Length = 210

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM 727
           N   + G T LHL+A+   +D +  L+E  A    Q   G TPLH     D   V  I +
Sbjct: 16  NQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAAVSADAQGVFQILL 75
Query: 728 FNGA-EIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRV 786
            N A ++D     G TPL +A+      M+  L+ + A+VNA  +LG + LH A+    V
Sbjct: 76  RNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNV 135
Query: 787 LIIDLLLGAGAQPNATTN-----LFCCA 809
               +LL  GA  +   N     LF  A
Sbjct: 136 DAAVVLLKNGANKDMQNNKEETPLFLAA 163

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 61/107 (57%)
Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
           G +PLH A R  ++ +V +L+  GA ++   R D TPLH+A+  G+ DI   LLQ+ A +
Sbjct: 39  GFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI 98
Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLA 532
           +A  + G   LH +   GQD+VA  L  +GA ++   K G  P+  A
Sbjct: 99  NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKA 145

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 59/115 (51%)
Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEI 733
           GF+PLH + +EG + +  +LI  GA ++   +   TPLHL A     ++    +   A+I
Sbjct: 39  GFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI 98
Query: 734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLI 788
           + V + G  PLH A  +GQ  +   LV NGA V+     G  P+ +A    R L+
Sbjct: 99  NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELL 153

>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a Resolution. Length = 223

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 99/216 (45%), Gaps = 7/216 (3%)
Query: 548 DAPVDSQGKVASILTESGASI-TATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGK 606
           DAP      V S     GAS+   T + G T LHLAA+Y R   A+ LL+  A  + Q  
Sbjct: 2   DAPA-----VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDN 56
Query: 607 NGVTPLHVASHYDHQNV-ALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
            G TPLH A   D Q V  +L+ +R     A   +G TPL +AA+     +   L+  +A
Sbjct: 57  MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHA 116
Query: 666 KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATI 725
             NA    G + LH +A   + D + +L+++GA    Q     TPL L A+E     A +
Sbjct: 117 DVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKV 176
Query: 726 TMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE 761
            + + A  D        P  IA      ++VR L E
Sbjct: 177 LLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDE 212

>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a Resolution. Length = 223

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 630 RGASPH-AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD 688
           +GAS H    + G T LH+AA+ ++ D A  LLE +A  N +   G TPLH +       
Sbjct: 13  QGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQG 72
Query: 689 MSSLLIEHGAT-VSHQAKNGLTPLHLCAQ-------EDKVNVATITMFNGAEIDPVTKAG 740
           +  +LI + AT +  +  +G TPL L A+       ED +N       + A+++ V   G
Sbjct: 73  VFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN-------SHADVNAVDDLG 125
Query: 741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
            + LH A+    ++    L++NGAN +   N   TPL  A+++G      +LL   A  +
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185
Query: 801 ATTNL 805
            T ++
Sbjct: 186 ITDHM 190

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 8/211 (3%)
Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGG-NQTLATEHNITP 131
           G  E  + LV+ G  +        T L+ AA  N   +V+Y +SKG     L  + N TP
Sbjct: 20  GIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTP 79
Query: 132 LHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKT 191
           LH A + G ++MV  L+  GA+      +G + +H AA+ GH +++  LI KG  +    
Sbjct: 80  LHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMD 139
Query: 192 KNGLAPLHMASQGDHEA-ATRVLIYHGAGV---DEITVDYLTALHVASHCGHVRVAKTLL 247
           +NG+ PL  A+   H    TR+L+     V   D+   +  TALH A   G+  V   LL
Sbjct: 140 QNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKN--TALHWAVLAGNTTVISLLL 197
Query: 248 DRKADPNARALNGFTPLHIA-CKKNRYKSSH 277
           +  A+ +A+ + G + L +A  +KN +  +H
Sbjct: 198 EAGANVDAQNIKGESALDLAKQRKNVWMINH 228

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 3/214 (1%)
Query: 582 AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKN- 640
           A +YG  +  + L++    V    K  VT LH A+  +  ++    + +GA    +  + 
Sbjct: 16  ATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDL 75
Query: 641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATV 700
             TPLH A ++  + +   L++Y A P+     G + +HL+AQ GHT + + LI  G  V
Sbjct: 76  NSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV 135
Query: 701 SHQAKNGLTPLHLCA-QEDKVNVATITMFNGAEIDPVTKA-GFTPLHIASHFGQLNMVRY 758
               +NG+TPL   A +   V+   + +     ++   K    T LH A   G   ++  
Sbjct: 136 DMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISL 195
Query: 759 LVENGANVNATTNLGYTPLHQASQQGRVLIIDLL 792
           L+E GANV+A    G + L  A Q+  V +I+ L
Sbjct: 196 LLEAGANVDAQNIKGESALDLAKQRKNVWMINHL 229

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVT-KA 739
           + Q G  +    L+E G  V    K  +T LH  A  +++++    +  GA +D +    
Sbjct: 16  ATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDL 75
Query: 740 GFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG 796
             TPLH A+  G L+MV  L++ GA+ +     G + +H A+Q G   I+  L+  G
Sbjct: 76  NSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG 132

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/107 (37%), Positives = 61/107 (57%)
Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
           G +PLH A R  ++ +V +L+  GA ++   R D TPLH+A+  G+ DI   LLQ+ A +
Sbjct: 34  GFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI 93
Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLA 532
           +A  + G   LH +   GQD+VA  L  +GA ++   K G  P+  A
Sbjct: 94  NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKA 140

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM 727
           N     GF+PLH + +EG + +  +LI  GA ++   +   TPLHL A     ++    +
Sbjct: 28  NQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLL 87
Query: 728 FNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVL 787
              A+I+ V + G  PLH A  +GQ  +   LV NGA V+     G  P+ +A    R L
Sbjct: 88  QYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLREL 147
Query: 788 I 788
           +
Sbjct: 148 L 148

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 56/82 (68%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V+A+ ++  TPLH+A+R G+ +I  +LL+ GA V+A  K G
Sbjct: 9   AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFG 68
Query: 493 YTALHISAKEGQDEVASILTES 514
            TA  IS   G +++A IL ++
Sbjct: 69  KTAFDISIDNGNEDLAEILQKA 90

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 466 ASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKG 525
           A+R G  D   +L+ +GA V+A  KDGYT LH++A+EG  E+  +L ++GA + A  K G
Sbjct: 9   AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFG 68
Query: 526 FTPLHLAAKYGRMKIAQML 544
            T   ++   G   +A++L
Sbjct: 69  KTAFDISIDNGNEDLAEIL 87

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 747 ASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLF 806
           A+  GQ + VR L+ NGA+VNA    GYTPLH A+++G + I+++LL AGA  NA     
Sbjct: 9   AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFG 68
Query: 807 CCA-TILVKNGAE 818
             A  I + NG E
Sbjct: 69  KTAFDISIDNGNE 81

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 52/79 (65%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V A+ +   TPLH+A+R G+ ++  LLL+ GA V+A  K G
Sbjct: 13  AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFG 72
Query: 493 YTALHISAKEGQDEVASIL 511
            TA  IS   G +++A IL
Sbjct: 73  KTAFDISIDNGNEDLAEIL 91

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 17/96 (17%)
Query: 499 SAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
           +A+ GQD+   IL  +GA + A  K G TPLHLAA+ G +++ ++LL             
Sbjct: 13  AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLL------------- 59
Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 594
               E+GA + A  K G T   ++   G   +A++L
Sbjct: 60  ----EAGADVNAQDKFGKTAFDISIDNGNEDLAEIL 91

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 626 LLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEG 685
           +L+  GA   A  KNG TPLH+AA+   +++   LLE  A  NA+ K G T   +S   G
Sbjct: 24  ILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISIDNG 83
Query: 686 HTDMSSLL 693
           + D++ +L
Sbjct: 84  NEDLAEIL 91

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 714 CAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLG 773
             Q+D+V    I M NGA++    K G TPLH+A+  G L +V+ L+E GA+VNA    G
Sbjct: 16  AGQDDEV---RILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFG 72
Query: 774 YTPLHQASQQGRVLIIDLL 792
            T    +   G   + ++L
Sbjct: 73  KTAFDISIDNGNEDLAEIL 91

>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q) Length = 168

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 623 VALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSA 682
           +A  LL RGA+P    + G+  +H AA+  Q+D   TLLE+ A  N E   G  PLHL+A
Sbjct: 52  IARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLAA 111
Query: 683 QEGHTDMSSLLIEHGAT-VSHQAKNGLTPLHLCAQEDKVNVATITMFNGA 731
           +EGH  +   L++H A+ V H+   G T   L     +  V ++   NGA
Sbjct: 112 KEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q) Length = 168

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 722 VATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQAS 781
           +A   +  GA  D   + GF  +H A+  GQL+ ++ L+E  A+VN   N G  PLH A+
Sbjct: 52  IARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLAA 111
Query: 782 QQGRVLIIDLLL 793
           ++G + +++ L+
Sbjct: 112 KEGHLRVVEFLV 123

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 336 TPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDA 395
           TPLH+A       IA  LL AG  P+    RG TPLHLA                ASV  
Sbjct: 44  TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCL----------ASVGV 93
Query: 396 RAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDAR 455
             +   TP H+ S L+          T   G T LHLA+      IV +L+  GA V+A+
Sbjct: 94  LTQSCTTP-HLHSILKA---------TNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQ 143
Query: 456 ARED-QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHIS 499
              + +T LH+A  L N D+ SLLL+ GA V+  T  GY+   ++
Sbjct: 144 EPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLT 188

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 31/200 (15%)
Query: 426 GETPLHLA----ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQH 481
           G++ LHLA     +A   +++R +  + A ++ +    QTPLH+A      +IA  LL  
Sbjct: 5   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALL-- 62
Query: 482 GASVDAPTKD--GYTALHISAKEGQDEVASILTESGAS------ITATTKKGFTPLHLAA 533
           GA  D   +D  G T LH++ ++G      +LT+S  +      + AT   G T LHLA+
Sbjct: 63  GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS 122
Query: 534 KYGRMKIAQMLLQKDAPVDSQ----GKVA-------------SILTESGASITATTKKGF 576
            +G + I ++L+   A V++Q    G+ A             S+L + GA +   T +G+
Sbjct: 123 IHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGY 182
Query: 577 TPLHLAAKYGRMKIAQMLLQ 596
           +P  L       +I Q L Q
Sbjct: 183 SPYQLTWGRPSTRIQQQLGQ 202

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 11/186 (5%)
Query: 572 TKKGFTPLHLA----AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLL 627
           T+ G + LHLA     K   M++ + +    A ++ Q     TPLH+A   +   +A  L
Sbjct: 2   TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 61
Query: 628 LDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPN------AESKAGFTPLHLS 681
           L  G  P      G TPLH+A ++  +     L +    P+      A +  G T LHL+
Sbjct: 62  LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 121
Query: 682 AQEGHTDMSSLLIEHGATVSHQAK-NGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +  G+  +  LL+  GA V+ Q   NG T LHL       ++ ++ +  GA+++ VT  G
Sbjct: 122 SIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQG 181
Query: 741 FTPLHI 746
           ++P  +
Sbjct: 182 YSPYQL 187

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT--- 699
           TPLH+A   NQ +IA  LL     P      G TPLHL+ ++G      +L +   T   
Sbjct: 44  TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 103
Query: 700 ---VSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKA-GFTPLHIASHFGQLNM 755
              +     NG T LHL +    + +  + +  GA+++      G T LH+A      ++
Sbjct: 104 HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL 163
Query: 756 VRYLVENGANVNATTNLGYTP 776
           V  L++ GA+VN  T  GY+P
Sbjct: 164 VSLLLKCGADVNRVTYQGYSP 184

>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236

Iteration: 1
 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 336 TPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDA 395
           TPLH+A       IA  LL AG  P+    RG TPLHLA                ASV  
Sbjct: 47  TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCL----------ASVGV 96
Query: 396 RAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDAR 455
             +   TP H+ S L+          T   G T LHLA+      IV +L+  GA V+A+
Sbjct: 97  LTQSCTTP-HLHSILKA---------TNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQ 146
Query: 456 ARED-QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHIS 499
              + +T LH+A  L N D+ SLLL+ GA V+  T  GY+   ++
Sbjct: 147 EPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLT 191

>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 31/200 (15%)
Query: 426 GETPLHLA----ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQH 481
           G++ LHLA     +A   +++R +  + A ++ +    QTPLH+A      +IA  LL  
Sbjct: 8   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALL-- 65
Query: 482 GASVDAPTKD--GYTALHISAKEGQDEVASILTESGAS------ITATTKKGFTPLHLAA 533
           GA  D   +D  G T LH++ ++G      +LT+S  +      + AT   G T LHLA+
Sbjct: 66  GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS 125
Query: 534 KYGRMKIAQMLLQKDAPVDSQ----GKVA-------------SILTESGASITATTKKGF 576
            +G + I ++L+   A V++Q    G+ A             S+L + GA +   T +G+
Sbjct: 126 IHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGY 185
Query: 577 TPLHLAAKYGRMKIAQMLLQ 596
           +P  L       +I Q L Q
Sbjct: 186 SPYQLTWGRPSTRIQQQLGQ 205

>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 20/204 (9%)
Query: 572 TKKGFTPLHLA----AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLL 627
           T+ G + LHLA     K   M++ + +    A ++ Q     TPLH+A   +   +A  L
Sbjct: 5   TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64
Query: 628 LDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPN------AESKAGFTPLHLS 681
           L  G  P      G TPLH+A ++  +     L +    P+      A +  G T LHL+
Sbjct: 65  LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124
Query: 682 AQEGHTDMSSLLIEHGATVSHQAK-NGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAG 740
           +  G+  +  LL+  GA V+ Q   NG T LHL       ++ ++ +  GA+++ VT  G
Sbjct: 125 SIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQG 184
Query: 741 FTPLH---------IASHFGQLNM 755
           ++P           I    GQL +
Sbjct: 185 YSPYQLTWGRPSTRIQQQLGQLTL 208

>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT--- 699
           TPLH+A   NQ +IA  LL     P      G TPLHL+ ++G      +L +   T   
Sbjct: 47  TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 106
Query: 700 ---VSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKA-GFTPLHIASHFGQLNM 755
              +     NG T LHL +    + +  + +  GA+++      G T LH+A      ++
Sbjct: 107 HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL 166
Query: 756 VRYLVENGANVNATTNLGYTP 776
           V  L++ GA+VN  T  GY+P
Sbjct: 167 VSLLLKCGADVNRVTYQGYSP 187

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
           AARA Q D VRIL+ NGA V A+ +   TPLH+A+R G+ ++  LLL+ GA V A  K G
Sbjct: 31  AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFG 90
Query: 493 YTALHISAKEGQDEVASIL 511
            TA  IS   G +++A IL
Sbjct: 91  KTAFDISIDNGNEDLAEIL 109

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 17/96 (17%)
Query: 499 SAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
           +A+ GQD+   IL  +GA + A  K G TPLHLAA+ G +++ ++LL             
Sbjct: 31  AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLL------------- 77
Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 594
               E+GA + A  K G T   ++   G   +A++L
Sbjct: 78  ----EAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 560 ILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYD 619
           IL  +GA + A  K G TPLHLAA+ G +++ ++LL+  A V +Q K G T   ++    
Sbjct: 42  ILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNG 101
Query: 620 HQNVALLL 627
           ++++A +L
Sbjct: 102 NEDLAEIL 109

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 626 LLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEG 685
           +L+  GA   A  KNG TPLH+AA+   +++   LLE  A   A+ K G T   +S   G
Sbjct: 42  ILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNG 101
Query: 686 HTDMSSLL 693
           + D++ +L
Sbjct: 102 NEDLAEIL 109

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 714 CAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLG 773
             Q+D+V    I M NGA++    K G TPLH+A+  G L +V+ L+E GA+V A    G
Sbjct: 34  AGQDDEVR---ILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFG 90
Query: 774 YTPLHQASQQGRVLIIDLL 792
            T    +   G   + ++L
Sbjct: 91  KTAFDISIDNGNEDLAEIL 109

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 94/231 (40%), Gaps = 36/231 (15%)
Query: 304 PLHIACKKNRY-KVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQA------ 356
           PLH AC +N + KV ELL    + +    + G  PLH +       I  FLL        
Sbjct: 5   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64
Query: 357 GAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSA 416
              PD +   G TP H+A      ++V+ L       D     +Q               
Sbjct: 65  DDYPDDS---GWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQ--------------- 106
Query: 417 SQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIAS 476
                    G T LHLA      ++ + L+ NGASV  + + +Q PLH A+ +G+  +  
Sbjct: 107 ---------GVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIE 157
Query: 477 LLLQHGAS-VDAPTKDGYTALHISAKEGQDEVASILTES-GASITATTKKG 525
           LL   G S V+   K G+T L  +  EG  + A +L E  GA       KG
Sbjct: 158 LLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKG 208

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 82/196 (41%), Gaps = 15/196 (7%)
Query: 556 KVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK-------DAPVDSQGKNG 608
           KV  +L    + +    + G  PLH +  +   +I   LL K       D P DS    G
Sbjct: 17  KVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDS----G 72
Query: 609 VTPLHVASHYDHQNVALLLLDRGASP--HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK 666
            TP H+A    +  V   L DR   P  + +   G T LH+A  K   +++  L+E  A 
Sbjct: 73  WTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS 132
Query: 667 PNAESKAGFTPLHLSAQEGHTDMSSLLIEHG-ATVSHQAKNGLTPLHLCAQEDKVNVATI 725
              + K    PLH +A  G   +  LL   G + V+ Q K G TPL     E   + A +
Sbjct: 133 VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVL 192
Query: 726 TMFN-GAEIDPVTKAG 740
            +   GAE D V   G
Sbjct: 193 LVEKYGAEYDLVDNKG 208

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 644 PLHIAAKKNQMDIATTLLEYNAKPN---AESKAGFTPLHLSAQEGHTDMSSLLIEHGATV 700
           PLH A  +N+      LL  ++KP+    + + G  PLH S      +++S L+     V
Sbjct: 5   PLHQACMENEFFKVQELL--HSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 62
Query: 701 S---HQAKNGLTPLHLCAQEDKVNVATITMFN---GAEIDPVTKAGFTPLHIASHFGQLN 754
           +   +   +G TP H+      + V   ++++     +++ +T  G T LH+A       
Sbjct: 63  NLDDYPDDSGWTPFHIACSVGNLEVVK-SLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121
Query: 755 MVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG 796
           + ++L+ENGA+V         PLH+A+  G + +I+LL G G
Sbjct: 122 VSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG 163

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 94/231 (40%), Gaps = 36/231 (15%)
Query: 304 PLHIACKKNRY-KVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQA------ 356
           PLH AC +N + KV ELL    + +    + G  PLH +       I  FLL        
Sbjct: 5   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64
Query: 357 GAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSA 416
              PD +   G TP H+A      ++V+ L       D     +Q               
Sbjct: 65  DDYPDDS---GWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQ--------------- 106
Query: 417 SQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIAS 476
                    G T LHLA      ++ + L+ NGASV  + + +Q PLH A+ +G+  +  
Sbjct: 107 ---------GVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIE 157
Query: 477 LLLQHGAS-VDAPTKDGYTALHISAKEGQDEVASILTES-GASITATTKKG 525
           LL   G S V+   K G+T L  +  EG  + A +L E  GA       KG
Sbjct: 158 LLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKG 208

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 82/196 (41%), Gaps = 15/196 (7%)
Query: 556 KVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK-------DAPVDSQGKNG 608
           KV  +L    + +    + G  PLH +  +   +I   LL K       D P DS    G
Sbjct: 17  KVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDS----G 72
Query: 609 VTPLHVASHYDHQNVALLLLDRGASP--HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK 666
            TP H+A    +  V   L DR   P  + +   G T LH+A  K   +++  L+E  A 
Sbjct: 73  WTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS 132
Query: 667 PNAESKAGFTPLHLSAQEGHTDMSSLLIEHG-ATVSHQAKNGLTPLHLCAQEDKVNVATI 725
              + K    PLH +A  G   +  LL   G + V+ Q K G TPL     E   + A +
Sbjct: 133 VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVL 192
Query: 726 TMFN-GAEIDPVTKAG 740
            +   GAE D V   G
Sbjct: 193 LVEKYGAEYDLVDNKG 208

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 644 PLHIAAKKNQMDIATTLLEYNAKPN---AESKAGFTPLHLSAQEGHTDMSSLLIEHGATV 700
           PLH A  +N+      LL  ++KP+    + + G  PLH S      +++S L+     V
Sbjct: 5   PLHQACMENEFFKVQELL--HSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 62
Query: 701 S---HQAKNGLTPLHLCAQEDKVNVATITMFN---GAEIDPVTKAGFTPLHIASHFGQLN 754
           +   +   +G TP H+      + V   ++++     +++ +T  G T LH+A       
Sbjct: 63  NLDDYPDDSGWTPFHIACSVGNLEVVK-SLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121
Query: 755 MVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG 796
           + ++L+ENGA+V         PLH+A+  G + +I+LL G G
Sbjct: 122 VSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG 163

>pdb|2RFA|A Chain A, Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat Domain Length = 232

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 95/216 (43%), Gaps = 36/216 (16%)
Query: 368 ETPLHLAARANQTDIVRILLR-NGASVDARAREDQTPLHVASRLRRFSSAS---QSALTR 423
           E+PL LAA+ N    +  LL+  G  V  R    +T LH+A+      +A    ++A   
Sbjct: 4   ESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPEL 63
Query: 424 V---------RGETPLHLAARANQTDIVRILLRNGASVDARA-------------REDQT 461
           V          G+T LH+A      ++VR LL  GASV ARA                + 
Sbjct: 64  VFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEH 123
Query: 462 PLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVAS-----ILTESGA 516
           PL  A+ +G+ +I  LL++HGA + A    G T LHI   +     A      +L+  G 
Sbjct: 124 PLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183
Query: 517 SITATTK-----KGFTPLHLAAKYGRMKIAQMLLQK 547
               + +     +G TP  LA   G + + Q L+QK
Sbjct: 184 DHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQK 219

>pdb|2RFA|A Chain A, Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat Domain Length = 232

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 37/218 (16%)
Query: 577 TPLHLAAKYGRMK-IAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPH 635
           +PL LAAK   ++ ++++L  +   V  +G  G T LH+A+ YD+   A++L++  A+P 
Sbjct: 5   SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLME--AAPE 62
Query: 636 AVAK-------NGYTPLHIAAKKNQMDIATTLLE-------------YNAKPNAESKAGF 675
            V +        G T LHIA     +++   LL              ++ +P+     G 
Sbjct: 63  LVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGE 122
Query: 676 TPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN------ 729
            PL  +A  G  ++  LLIEHGA +  Q   G T LH+   +     A   M+N      
Sbjct: 123 HPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFAC-QMYNLLLSYD 181
Query: 730 ------GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE 761
                   E+ P    G TP  +A   G + M ++L++
Sbjct: 182 GGDHLKSLELVP-NNQGLTPFKLAGVEGNIVMFQHLMQ 218

>pdb|2RFA|A Chain A, Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat Domain Length = 232

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 37/185 (20%)
Query: 643 TPLHIAAKKNQMDIATTLLEYN-AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATV- 700
           +PL +AAK+N +   + LL++   + +     G T LH++A   + + + +L+E    + 
Sbjct: 5   SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELV 64
Query: 701 ----SHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDP-------------VTKAGFTP 743
               + +   G T LH+      VN+    +  GA +               +   G  P
Sbjct: 65  FEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHP 124
Query: 744 LHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
           L  A+  G   +VR L+E+GA++ A  +LG T LH       +LI+        QPN T 
Sbjct: 125 LSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLH-------ILIL--------QPNKT- 168
Query: 804 NLFCC 808
             F C
Sbjct: 169 --FAC 171

>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures Length = 168

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 582 AAKYGRMKIAQMLLQKD-APVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKN 640
           AA  G ++  + LL ++    D+  + G T L V   +    VAL LL +GASP+    +
Sbjct: 17  AAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSPAVALELLKQGASPNVQDAS 75
Query: 641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATV 700
           G +P+H AA+   +D    L+E+ A  NA    G  P+HL+ +EGH+ + S L    + +
Sbjct: 76  GTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFLAPE-SDL 134
Query: 701 SHQAKNGLTPLHLCAQEDKVNVATI 725
            H+  +GLTPL L  Q    N+  I
Sbjct: 135 HHRDASGLTPLELARQRGAQNLMDI 159

>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures Length = 168

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 615 ASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAG 674
           A+  D Q V  LL      P A+ + G T L +    +   +A  LL+  A PN +  +G
Sbjct: 18  AARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSPA-VALELLKQGASPNVQDASG 76
Query: 675 FTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID 734
            +P+H +A+ G  D   +L+EH                                 GA+++
Sbjct: 77  TSPVHDAARTGFLDTLKVLVEH---------------------------------GADVN 103
Query: 735 PVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG 794
            +   G  P+H+A   G  ++V +L    ++++     G TPL  A Q+G   ++D+L G
Sbjct: 104 ALDSTGSLPIHLAIREGHSSVVSFLAPE-SDLHHRDASGLTPLELARQRGAQNLMDILQG 162

>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX Length = 166

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 582 AAKYGRMKIAQMLLQKD-APVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKN 640
           AA  G ++  + LL ++    D+  + G T L V   +    VAL LL +GASP+    +
Sbjct: 15  AAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSPAVALELLKQGASPNVQDAS 73
Query: 641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATV 700
           G +P+H AA+   +D    L+E+ A  NA    G  P+HL+ +EGH+ + S L    + +
Sbjct: 74  GTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFLAPE-SDL 132
Query: 701 SHQAKNGLTPLHLCAQEDKVNVATI 725
            H+  +GLTPL L  Q    N+  I
Sbjct: 133 HHRDASGLTPLELARQRGAQNLMDI 157

>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX Length = 166

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 615 ASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAG 674
           A+  D Q V  LL      P A+ + G T L +    +   +A  LL+  A PN +  +G
Sbjct: 16  AARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSPA-VALELLKQGASPNVQDASG 74
Query: 675 FTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID 734
            +P+H +A+ G  D   +L+EH                                 GA+++
Sbjct: 75  TSPVHDAARTGFLDTLKVLVEH---------------------------------GADVN 101
Query: 735 PVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG 794
            +   G  P+H+A   G  ++V +L    ++++     G TPL  A Q+G   ++D+L G
Sbjct: 102 ALDSTGSLPIHLAIREGHSSVVSFLAPE-SDLHHRDASGLTPLELARQRGAQNLMDILQG 160

>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 94/231 (40%), Gaps = 36/231 (15%)
Query: 304 PLHIACKKNRY-KVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQA------ 356
           PLH AC +N + KV ELL    + +    + G  PLH +       I  FLL        
Sbjct: 5   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64
Query: 357 GAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSA 416
              PD +   G TP H+A      ++V+ L       D     +Q               
Sbjct: 65  DDYPDDS---GWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQ--------------- 106
Query: 417 SQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIAS 476
                    G T LHLA      ++ + L+ NGASV  + + +Q PLH A+ +G+  +  
Sbjct: 107 ---------GVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIE 157
Query: 477 LLLQHGAS-VDAPTKDGYTALHISAKEGQDEVASILTES-GASITATTKKG 525
           LL   G S V+   K G+T L  +  EG  + A +L E  GA       KG
Sbjct: 158 LLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKG 208

>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 82/196 (41%), Gaps = 15/196 (7%)
Query: 556 KVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK-------DAPVDSQGKNG 608
           KV  +L    + +    + G  PLH +  +   +I   LL K       D P DS    G
Sbjct: 17  KVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDS----G 72
Query: 609 VTPLHVASHYDHQNVALLLLDRGASP--HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK 666
            TP H+A    +  V   L DR   P  + +   G T LH+A  K   +++  L+E  A 
Sbjct: 73  WTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS 132
Query: 667 PNAESKAGFTPLHLSAQEGHTDMSSLLIEHG-ATVSHQAKNGLTPLHLCAQEDKVNVATI 725
              + K    PLH +A  G   +  LL   G + V+ Q K G TPL     E   + A +
Sbjct: 133 VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVL 192
Query: 726 TMFN-GAEIDPVTKAG 740
            +   GAE D V   G
Sbjct: 193 LVEKYGAEYDLVDNKG 208

>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 644 PLHIAAKKNQMDIATTLLEYNAKPN---AESKAGFTPLHLSAQEGHTDMSSLLIEHGATV 700
           PLH A  +N+      LL  ++KP+    + + G  PLH S      +++S L+     V
Sbjct: 5   PLHQACMENEFFKVQELL--HSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 62
Query: 701 S---HQAKNGLTPLHLCAQEDKVNVATITMFN---GAEIDPVTKAGFTPLHIASHFGQLN 754
           +   +   +G TP H+      + V   ++++     +++ +T  G T LH+A       
Sbjct: 63  NLDDYPDDSGWTPFHIACSVGNLEVVK-SLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121
Query: 755 MVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG 796
           + ++L+ENGA+V         PLH+A+  G + +I+LL G G
Sbjct: 122 VSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG 163

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 553 SQGKVASILT--ESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVT 610
           +QG++  + T  E    I  T ++GFTPL  AA +G++ + + LLQ  A     GK   +
Sbjct: 10  AQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRES 69
Query: 611 PLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE 670
            L +A    + ++  +LLD G   +    NG TPL  A   N +     LLE  A P  E
Sbjct: 70  ALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIE 129
Query: 671 SKAGFTPLHLSAQEGHTDMSSLLIEH 696
           + +G+  + L+   G+  +  ++  H
Sbjct: 130 TDSGYNSMDLAVALGYRSVQQVIESH 155

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
           + G+TPL  AA   Q+ +   LL+  A P    K   + L L+  +G+TD+  +L++ G 
Sbjct: 32  EEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGV 91
Query: 699 TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG 751
            V+    NG TPL      + V    + + +GA+    T +G+  + +A   G
Sbjct: 92  DVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALG 144

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 678 LHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVT 737
           +H  A +G     +  IE    ++H  + G TPL   A   ++ V    + NGA+   + 
Sbjct: 5   VHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG 64
Query: 738 KAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
           K   + L +A   G  ++V+ L++ G +VN     G TPL  A     V  + +LL +GA
Sbjct: 65  KGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 124
Query: 798 QPNATTN 804
            P   T+
Sbjct: 125 DPTIETD 131

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 553 SQGKVASILT--ESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVT 610
           +QG++  + T  E    I  T ++GFTPL  AA +G++ + + LLQ  A     GK   +
Sbjct: 28  AQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRES 87
Query: 611 PLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE 670
            L +A    + ++  +LLD G   +    NG TPL  A   N +     LLE  A P  E
Sbjct: 88  ALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIE 147
Query: 671 SKAGFTPLHLSAQEGHTDMSSLLIEH 696
           + +G+  + L+   G+  +  ++  H
Sbjct: 148 TDSGYNSMDLAVALGYRSVQQVIESH 173

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 678 LHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVT 737
           +H  A +G     +  IE    ++H  + G TPL   A   ++ V    + NGA+   + 
Sbjct: 23  VHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG 82
Query: 738 KAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
           K   + L +A   G  ++V+ L++ G +VN     G TPL  A     V  + +LL +GA
Sbjct: 83  KGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 142
Query: 798 QPNATTN 804
            P   T+
Sbjct: 143 DPTIETD 149

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 553 SQGKVASILT--ESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVT 610
           +QG++  + T  E    I  T ++GFTPL  AA +G++ + + LLQ  A     GK   +
Sbjct: 12  AQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRES 71
Query: 611 PLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE 670
            L +A    + ++  +LLD G   +    NG TPL  A   N +     LLE  A P  E
Sbjct: 72  ALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIE 131
Query: 671 SKAGFTPLHLSAQEGHTDMSSLLIEH 696
           + +G+  + L+   G+  +  ++  H
Sbjct: 132 TDSGYNSMDLAVALGYRSVQQVIESH 157

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
           + G+TPL  AA   Q+ +   LL+  A P    K   + L L+  +G+TD+  +L++ G 
Sbjct: 34  EEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGV 93
Query: 699 TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG 751
            V+    NG TPL      + V    + + +GA+    T +G+  + +A   G
Sbjct: 94  DVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALG 146

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 678 LHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVT 737
           +H  A +G     +  IE    ++H  + G TPL   A   ++ V    + NGA+   + 
Sbjct: 7   VHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG 66
Query: 738 KAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
           K   + L +A   G  ++V+ L++ G +VN     G TPL  A     V  + +LL +GA
Sbjct: 67  KGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 126
Query: 798 QPNATTN 804
            P   T+
Sbjct: 127 DPTIETD 133

>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6) Length = 162

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 623 VALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSA 682
           +A  LL RGA+P    + G+  +H AA+   +D   TLLE+ A  N E   G  PLHL+A
Sbjct: 52  IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAA 111
Query: 683 QEGHTDMSSLLIEHGAT-VSHQAKNGLTPLHLCAQEDKVNVATITMFNGA 731
           +EGH  +   L++H A+ V H+   G T   L     +  V ++   NGA
Sbjct: 112 KEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6) Length = 162

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 722 VATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQAS 781
           +A   +  GA  D   + GF  +H A+  G L+ ++ L+E  A+VN   N G  PLH A+
Sbjct: 52  IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAA 111
Query: 782 QQGRVLIIDLLL 793
           ++G + +++ L+
Sbjct: 112 KEGHLRVVEFLV 123

>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures Length = 168

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 623 VALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSA 682
           +A  LL RGA+P    + G+  +H AA+   +D   TLLE+ A  N E   G  PLHL+A
Sbjct: 52  IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAA 111
Query: 683 QEGHTDMSSLLIEHGAT-VSHQAKNGLTPLHLCAQEDKVNVATITMFNGA 731
           +EGH  +   L++H A+ V H+   G T   L     +  V ++   NGA
Sbjct: 112 KEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures Length = 168

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 722 VATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQAS 781
           +A   +  GA  D   + GF  +H A+  G L+ ++ L+E  A+VN   N G  PLH A+
Sbjct: 52  IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAA 111
Query: 782 QQGRVLIIDLLL 793
           ++G + +++ L+
Sbjct: 112 KEGHLRVVEFLV 123

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 229 TALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLL 288
           T LH+AS  G +   + LL   +DPN +   G+TPLH AC           H+ V + LL
Sbjct: 12  TLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNH--------GHLKVVELLL 63
Query: 289 DRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPL 338
             KA  N       +PLH A K     +V+LLL YGAS  A    GL P+
Sbjct: 64  QHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPV 113

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 260 GFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVEL 319
           G T LHIA  K    S         + LL   +DPN +   G+TPLH AC     KVVEL
Sbjct: 10  GETLLHIASIKGDIPS--------VEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVEL 61
Query: 320 LLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPL 371
           LL++ A +  T     +PLH A+  G ++I   LL  GA+ +   + G  P+
Sbjct: 62  LLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPV 113

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 51/95 (53%)
Query: 301 GFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAP 360
           G T LHIA  K     VE LL+ G+       +G TPLH A   G + +   LLQ  A  
Sbjct: 10  GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV 69
Query: 361 DTATVRGETPLHLAARANQTDIVRILLRNGASVDA 395
           +T   + ++PLH AA+    DIV++LL  GAS +A
Sbjct: 70  NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA 104

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 53/109 (48%)
Query: 421 LTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQ 480
            T  RGET LH+A+       V  LL+NG+  + +     TPLH A   G+  +  LLLQ
Sbjct: 5   FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQ 64
Query: 481 HGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPL 529
           H A V+       + LH +AK G  ++  +L   GAS  A    G  P+
Sbjct: 65  HKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPV 113

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 571 TTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDR 630
           T  +G T LH+A+  G +   + LLQ  +  + +   G TPLH A ++ H  V  LLL  
Sbjct: 6   TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQH 65
Query: 631 GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMS 690
            A  +       +PLH AAK   +DI   LL Y A  NA +  G  P+  +  E    M 
Sbjct: 66  KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDES---MK 122
Query: 691 SLLI 694
           SLL+
Sbjct: 123 SLLL 126

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATV 700
           G T LHIA+ K  +     LL+  + PN +  AG+TPLH +   GH  +  LL++H A V
Sbjct: 10  GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV 69
Query: 701 SHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPL 744
           +       +PLH  A+   V++  + +  GA  + V   G  P+
Sbjct: 70  NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPV 113

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
           G T LH+ + +  +      + NG++ +    AG+TPLH A + G L +V  L+++ A V
Sbjct: 10  GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV 69
Query: 767 NATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCATILVKNGAEIDPVTKLS 826
           N T     +PLH A++ G V I+ LLL  GA  NA  N+F    +   +   +  +  L 
Sbjct: 70  NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA-VNIFGLRPVDYTDDESMKSLLLLP 128
Query: 827 DEHEKS 832
           +++E S
Sbjct: 129 EKNESS 134

>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d Length = 156

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 582 AAKYGRMKIAQMLLQKD-APVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKN 640
           AA  G ++  + LL ++    D+  + G T L V   +    +AL LL +GASP+    +
Sbjct: 9   AAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTS 67
Query: 641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATV 700
           G +P+H AA+   +D    L+E+ A  N     G  P+HL+ QEGHT + S L    + +
Sbjct: 68  GTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDL 126
Query: 701 SHQAKNGLTPLHLCAQEDKVNVATI 725
             +   GLTPL L  Q    ++  I
Sbjct: 127 HRRDARGLTPLELALQRGAQDLVDI 151

>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d Length = 156

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+ +  ++   L      P+A ++ G T L +    G T ++  L++ GA+ + Q  +G
Sbjct: 10  AARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSG 68
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            +P+H  A+   ++   + + +GA+++     G  P+H+A   G   +V +L    ++++
Sbjct: 69  TSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH 127
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLLLG 794
                G TPL  A Q+G   ++D+L G
Sbjct: 128 RRDARGLTPLELALQRGAQDLVDILQG 154

>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 166

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 582 AAKYGRMKIAQMLLQKD-APVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKN 640
           AA  G ++  + LL ++    D+  + G T L V   +    +AL LL +GASP+    +
Sbjct: 15  AAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTS 73
Query: 641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATV 700
           G +P+H AA+   +D    L+E+ A  N     G  P+HL+ QEGHT + S L    + +
Sbjct: 74  GTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDL 132
Query: 701 SHQAKNGLTPLHLCAQEDKVNVATI 725
             +   GLTPL L  Q    ++  I
Sbjct: 133 HRRDARGLTPLELALQRGAQDLVDI 157

>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 166

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
           AA+ +  ++   L      P+A ++ G T L +    G T ++  L++ GA+ + Q  +G
Sbjct: 16  AARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSG 74
Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
            +P+H  A+   ++   + + +GA+++     G  P+H+A   G   +V +L    ++++
Sbjct: 75  TSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH 133
Query: 768 ATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP 799
                G TPL  A Q+G   ++D+L G    P
Sbjct: 134 RRDARGLTPLELALQRGAQDLVDILQGHMVAP 165

>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n) Length = 168

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 623 VALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSA 682
           +A  LL RGA+P    + G+  +H AA+   +D   TLLE  A  N E   G  PLHL+A
Sbjct: 52  IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLAA 111
Query: 683 QEGHTDMSSLLIEHGAT-VSHQAKNGLTPLHLCAQEDKVNVATITMFNGA 731
           +EGH  +   L++H A+ V H+   G T   L     +  V ++   NGA
Sbjct: 112 KEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n) Length = 168

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 722 VATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQAS 781
           +A   +  GA  D   + GF  +H A+  G L+ ++ L+EN A+VN   N G  PLH A+
Sbjct: 52  IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLAA 111
Query: 782 QQGRVLIIDLLL 793
           ++G + +++ L+
Sbjct: 112 KEGHLRVVEFLV 123

>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c Length = 168

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 623 VALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSA 682
           +A  LL RGA+P    + G   +H AA+   +D   TLLE+ A  N E   G  PLHL+A
Sbjct: 52  IARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAA 111
Query: 683 QEGHTDMSSLLIEHGAT-VSHQAKNGLTPLHLCAQEDKVNVATITMFNGA 731
           +EGH  +   L++H A+ V H+   G T   L     +  V ++   NGA
Sbjct: 112 KEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 65/123 (52%)
Query: 424 VRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGA 483
           + G T L  A + N+  I   LL  G++V+ +    +TPL  +   G  +++  LL+HGA
Sbjct: 66  IEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGA 125
Query: 484 SVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQM 543
           +V+    +G T L +++K G+ E+   L E GA I+A    G T    A  +GR ++ ++
Sbjct: 126 NVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKI 185
Query: 544 LLQ 546
             +
Sbjct: 186 FTE 188

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 70/152 (46%)
Query: 610 TPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNA 669
           TPL VA     +N    L++           G T L  A K N++ IA  LL   +  N 
Sbjct: 37  TPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT 96
Query: 670 ESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN 729
           +  +G TPL  S   G+++MS  L+EHGA V+ +   G TPL + ++  +  +    +  
Sbjct: 97  KDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLEL 156
Query: 730 GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE 761
           GA+I      G T    A  FG+  +++   E
Sbjct: 157 GADISARDLTGLTAEASARIFGRQEVIKIFTE 188

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 63/126 (50%)
Query: 676 TPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDP 735
           TPL ++   G  +    L+E+   +  +   G T L    + +++ +A   +  G+ ++ 
Sbjct: 37  TPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT 96
Query: 736 VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGA 795
              +G TPL  +  FG   M  +L+E+GANVN     G TPL  AS+ GR  I+  LL  
Sbjct: 97  KDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLEL 156
Query: 796 GAQPNA 801
           GA  +A
Sbjct: 157 GADISA 162

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 63/135 (46%)
Query: 580 HLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAK 639
            LAA+    ++ + L + D  V+   + G TPL  AS +        LL+ GA PH +AK
Sbjct: 8   QLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAK 67
Query: 640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT 699
              + L +A+     DI   LLE +   N     G TPL  + +  H      L+  GA 
Sbjct: 68  ERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGAD 127
Query: 700 VSHQAKNGLTPLHLC 714
           ++ +A +G TP+ L 
Sbjct: 128 LTTEADSGYTPMDLA 142

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
           + G+TPL  A+   +++    LLE+ A P+  +K   + L L++  G+TD+  LL+E   
Sbjct: 34  ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV 93
Query: 699 TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY 758
            ++    NG TPL    + + V      +  GA++     +G+TP+ +A   G    V+ 
Sbjct: 94  DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALG-YRKVQQ 152
Query: 759 LVEN 762
           ++EN
Sbjct: 153 VIEN 156

>pdb|2FO1|E Chain E, Crystal Structure Of The Csl-Notch-Mastermind Ternary Complex Bound To Dna Length = 373

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 25/235 (10%)
Query: 284 AKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASF 343
           AK  +   AD NA   +  TPL +A    R ++V  L K GA      +S  + LH A+ 
Sbjct: 149 AKECIAAGADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAAA 208
Query: 344 MGCMNIAIFLLQAGAAP---DTATVRGETPLHLAARANQTDIV---RILLRNGASVDARA 397
                  ++ L +       +     G T L + A     D V   ++L+  GA VD   
Sbjct: 209 NRDFGXXVYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVD--- 265
Query: 398 REDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILL-RNGASVDARA 456
                          +  A++    + +G T LH AA+ +   IV+ L+   G++ D + 
Sbjct: 266 ---------------YDGAARKDSEKYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQD 310
Query: 457 REDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASIL 511
            + +TP+ +A++ G  ++   L+Q GASV+A     +TA  ++       +  I 
Sbjct: 311 EDGKTPIXLAAQEGRIEVVXYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIF 365

>pdb|2FO1|E Chain E, Crystal Structure Of The Csl-Notch-Mastermind Ternary Complex Bound To Dna Length = 373

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 35/219 (15%)
Query: 428 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGAS--- 484
           TPL LA  A +  +V  L + GA      + +++ LH A+   N D    +    ++   
Sbjct: 168 TPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAA--ANRDFGXXVYXLNSTKLK 225
Query: 485 --VDAPTKDGYTALHISA-KEGQDEVAS--ILTESGASIT--------ATTKKGFTPLHL 531
             ++   ++G TAL I A  EG+D+VAS  +L E GA +         +   KG T LH 
Sbjct: 226 GDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHY 285
Query: 532 AAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIA 591
           AA+     I + L+                 E G++     + G TP+ LAA+ GR+++ 
Sbjct: 286 AAQVSNXPIVKYLV----------------GEKGSNKDKQDEDGKTPIXLAAQEGRIEVV 329
Query: 592 QMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDR 630
             L+Q+ A V++      T   +A   +H N+ + + DR
Sbjct: 330 XYLIQQGASVEAVDATDHTARQLAQANNHHNI-VDIFDR 367

>pdb|2FO1|E Chain E, Crystal Structure Of The Csl-Notch-Mastermind Ternary Complex Bound To Dna Length = 373

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 19/184 (10%)
Query: 631 GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMS 690
           GA  +A   +  TPL +A    +  +   L +  A P   +K+  + LH +A   + D  
Sbjct: 156 GADVNAXDCDENTPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALHQAA--ANRDFG 213
Query: 691 SLLIEHGAT-----VSHQAKNGLTPLHLCAQ---EDKVNVATITMFNGAEIDPVTKA--- 739
             +    +T     +    +NG T L + A     D+V  A + +  GA++D    A   
Sbjct: 214 XXVYXLNSTKLKGDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD 273
Query: 740 -----GFTPLHIASHFGQLNMVRYLV-ENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
                G T LH A+      +V+YLV E G+N +     G TP+  A+Q+GR+ ++  L+
Sbjct: 274 SEKYKGRTALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLI 333
Query: 794 GAGA 797
             GA
Sbjct: 334 QQGA 337

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 495 ALHISAKEGQ-DEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS 553
           ++H  A +G+ D++   L +    +    ++GFTPL  A+ +G ++  + LL        
Sbjct: 5   SIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLL-------- 56
Query: 554 QGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLH 613
                    E GA      K+  + L LA+  G   I  +LL++D  ++    NG TPL 
Sbjct: 57  ---------EWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLL 107
Query: 614 VASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIA 648
            A H +H      LL RGA     A +GYTP+ +A
Sbjct: 108 YAVHGNHVKCVEALLARGADLTTEADSGYTPMDLA 142

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 62/135 (45%)
Query: 580 HLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAK 639
            LAA+    ++ + L + D  V+   + G TPL  AS +        LL+ GA PH +AK
Sbjct: 8   QLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAK 67
Query: 640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT 699
              + L +A+     DI   LLE +   N     G TPL  +    H      L+  GA 
Sbjct: 68  ERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVHGNHVKCVEALLARGAD 127
Query: 700 VSHQAKNGLTPLHLC 714
           ++ +A +G TP+ L 
Sbjct: 128 LTTEADSGYTPMDLA 142

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
           + G+TPL  A+   +++    LLE+ A P+  +K   + L L++  G+TD+  LL+E   
Sbjct: 34  ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDV 93
Query: 699 TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY 758
            ++    NG TPL      + V      +  GA++     +G+TP+ +A   G    V+ 
Sbjct: 94  DINIYDWNGGTPLLYAVHGNHVKCVEALLARGADLTTEADSGYTPMDLAVALG-YRKVQQ 152
Query: 759 LVEN 762
           ++EN
Sbjct: 153 VIEN 156

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
Query: 67  TKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDG---VVRYLLSKGGNQTL 123
           T    TG E +A     +G  +       F PL +    + +G   +V+ ++ +  + +L
Sbjct: 17  TNLRKTGSERIA-----HGMRVK------FNPLALLLDSSLEGEFDLVQRIIYEVDDPSL 65
Query: 124 ATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEK 183
             +  IT LH A   G   +V+ L+  G N+ A   DG TPLHCAA   +  V   L+E 
Sbjct: 66  PNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVES 125
Query: 184 GAALYSKT 191
           GAA+++ T
Sbjct: 126 GAAVFAMT 133

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 458 EDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGAS 517
           E  T LH A   G+ +I   L+Q G +V+A   DG+T LH +A     +V   L ESGA+
Sbjct: 69  EGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA 128
Query: 518 ITATT 522
           + A T
Sbjct: 129 VFAMT 133

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 740 GFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP 799
           G T LH A   G   +V++LV+ G NVNA  + G+TPLH A+    V +   L+ +GA  
Sbjct: 70  GITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129
Query: 800 NATT 803
            A T
Sbjct: 130 FAMT 133

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Query: 67  TKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDG---VVRYLLSKGGNQTL 123
           T    TG E +A     +G  +    L    PL +    + +G   +V+ ++ +  + +L
Sbjct: 15  TNLRKTGSERIA-----HGMRVKFNPL----PLALLLDSSLEGEFDLVQRIIYEVDDPSL 65
Query: 124 ATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEK 183
             +  IT LH A   G   +V+ L+  G N+ A   DG TPLHCAA   +  V   L+E 
Sbjct: 66  PNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVES 125
Query: 184 GAALYSKT 191
           GAA+++ T
Sbjct: 126 GAAVFAMT 133

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 458 EDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGAS 517
           E  T LH A   G+ +I   L+Q G +V+A   DG+T LH +A     +V   L ESGA+
Sbjct: 69  EGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA 128
Query: 518 ITATT 522
           + A T
Sbjct: 129 VFAMT 133

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 740 GFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP 799
           G T LH A   G   +V++LV+ G NVNA  + G+TPLH A+    V +   L+ +GA  
Sbjct: 70  GITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129
Query: 800 NATT 803
            A T
Sbjct: 130 FAMT 133

>pdb|1OY3|D Chain D, Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 97/228 (42%), Gaps = 20/228 (8%)
Query: 492 GYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPV 551
           G TALH++A  G+      L  +GA +    + G T LHLA +      A +LLQ   P 
Sbjct: 45  GQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQ---PR 101
Query: 552 DSQGKVAS--ILTESGASITATTKK----GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG 605
            S  + AS   LT+S      T+         P     +  R +  ++ L+      ++ 
Sbjct: 102 PSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE------AEN 155
Query: 606 KNGVTPLHVASHYDHQNVALLLLDRGAS---PHAVAKNGYTPLHIAAKKNQMDIATTLLE 662
            +G TPLHVA  +    +  LL D GA    P      G TPLH+A +     +   LL+
Sbjct: 156 YDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTC--GRTPLHLAVEAQAASVLELLLK 213
Query: 663 YNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTP 710
             A P A    G TPL  +    +  ++ LL  HGA       + L+P
Sbjct: 214 AGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSP 261

>pdb|1OY3|D Chain D, Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 92/234 (39%), Gaps = 23/234 (9%)
Query: 572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAP---VDSQGKNGVTPLHVASHYDHQNVALLLL 628
           T+ G T LHLA  +        LL   A    +D Q   G T LH+A+     +    L 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65
Query: 629 DRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD 688
             GA      + G+T LH+A +      A  LL+   +P+    A  T L   +Q+   D
Sbjct: 66  AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQ--PRPSHPRDASDTYL-TQSQDCTPD 122
Query: 689 MSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS 748
            S     H         N         +E+  +            D     G TPLH+A 
Sbjct: 123 TS-----HAPAAVDSQPNPEN------EEEPRDEDWRLQLEAENYD-----GHTPLHVAV 166
Query: 749 HFGQLNMVRYLVENGANVN-ATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA 801
                 MVR L + GA++N      G TPLH A +     +++LLL AGA P A
Sbjct: 167 IHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTA 220

>pdb|1K3Z|D Chain D, X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 97/228 (42%), Gaps = 20/228 (8%)
Query: 492 GYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPV 551
           G TALH++A  G+      L  +GA +    + G T LHLA +      A +LLQ   P 
Sbjct: 45  GQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQ---PR 101
Query: 552 DSQGKVAS--ILTESGASITATTKK----GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG 605
            S  + AS   LT+S      T+         P     +  R +  ++ L+      ++ 
Sbjct: 102 PSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE------AEN 155
Query: 606 KNGVTPLHVASHYDHQNVALLLLDRGAS---PHAVAKNGYTPLHIAAKKNQMDIATTLLE 662
            +G TPLHVA  +    +  LL D GA    P      G TPLH+A +     +   LL+
Sbjct: 156 YDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTC--GRTPLHLAVEAQAASVLELLLK 213
Query: 663 YNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTP 710
             A P A    G TPL  +    +  ++ LL  HGA       + L+P
Sbjct: 214 AGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSP 261

>pdb|1K3Z|D Chain D, X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 92/234 (39%), Gaps = 23/234 (9%)
Query: 572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAP---VDSQGKNGVTPLHVASHYDHQNVALLLL 628
           T+ G T LHLA  +        LL   A    +D Q   G T LH+A+     +    L 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65
Query: 629 DRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD 688
             GA      + G+T LH+A +      A  LL+   +P+    A  T L   +Q+   D
Sbjct: 66  AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQ--PRPSHPRDASDTYL-TQSQDCTPD 122
Query: 689 MSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS 748
            S     H         N         +E+  +            D     G TPLH+A 
Sbjct: 123 TS-----HAPAAVDSQPNPEN------EEEPRDEDWRLQLEAENYD-----GHTPLHVAV 166
Query: 749 HFGQLNMVRYLVENGANVN-ATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA 801
                 MVR L + GA++N      G TPLH A +     +++LLL AGA P A
Sbjct: 167 IHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTA 220

>pdb|3UI2|A Chain A, Crystal Structure Of The Cpsrp54 Tail Bound To Cpsrp43 Length = 244

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 458 EDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGAS 517
           E +TP   A+R  +    S LL+    VDA  ++G TAL   A  G D+   +L E+GA 
Sbjct: 44  EYETPWWTAARKADEQALSQLLED-RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD 102
Query: 518 IT-ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGF 576
           +     + G T LH+AA Y R ++ + L++  A ++ + +      E    I  TT KG 
Sbjct: 103 LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKG- 161
Query: 577 TPLHLAAKYGRMKIAQML 594
            P+    + G  K+  +L
Sbjct: 162 NPMQFGRRIGLEKVINVL 179

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 7/188 (3%)
Query: 612 LHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAES 671
           L  A+  D + V  +L D       V   G TPL+IA   N ++IA  L++  A  N ++
Sbjct: 10  LEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQN 69
Query: 672 KAGFTPLHLSAQEGHTDMSSLLIEHGA-TVSHQAKNGLTPLHLCAQEDKVNVATITMFNG 730
               +P   +  +G T++ + +++H    ++   + G   L   A++  ++   + + +G
Sbjct: 70  SISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDG 129
Query: 731 AE-IDPVTKAGFTPLHIASHFGQLN-----MVRYLVENGANVNATTNLGYTPLHQASQQG 784
            E ID     G+T L  A    + N     +V+ L+ENGA+ +   N G T +  A+Q+G
Sbjct: 130 REDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKG 189
Query: 785 RVLIIDLL 792
              I  +L
Sbjct: 190 YTEISKIL 197

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 711 LHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATT 770
           L    Q D   V  I      ++D V   G TPL+IA H   + + + L++ GA++N   
Sbjct: 10  LEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQN 69
Query: 771 NLGYTPLHQASQQGRVLIIDLLLG-AGAQPNATTNLFCCATILVKNGAEIDPVTKLSDEH 829
           ++  +P   A  QGR  I+  +L  A    N        A I       ID V  L ++ 
Sbjct: 70  SISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDG 129
Query: 830 EKSIDLPN 837
            + ID  N
Sbjct: 130 REDIDFQN 137

>pdb|3DEO|A Chain A, Structural Basis For Specific Substrate Recognition By The Chloroplast Signal Recognition Particle Protein Cpsrp43 Length = 183

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 458 EDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGAS 517
           E +TP   A+R  +    S LL+    VDA  ++G TAL   A  G D+   +L E+GA 
Sbjct: 43  EYETPWWTAARKADEQALSQLLED-RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD 101
Query: 518 IT-ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGF 576
           +     + G T LH+AA Y R ++ + L++  A ++ + +      E    I  TT KG 
Sbjct: 102 LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKG- 160
Query: 577 TPLHLAAKYGRMKIAQML 594
            P+    + G  K+  +L
Sbjct: 161 NPMQFGRRIGLEKVINVL 178

>pdb|2F37|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Human Trpv2 Length = 251

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 81/193 (41%), Gaps = 47/193 (24%)
Query: 366 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVR 425
           RG + LH+A        V++L+ NGA+V ARA              RF    Q       
Sbjct: 94  RGHSALHIAIEKRSLQCVKLLVENGANVHARA------------CGRFFQKGQGTCFYF- 140
Query: 426 GETPLHLAARANQTDIVRILLRNG---ASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
           GE PL LAA   Q D+V  LL N    AS+ A   +  T LH    + +    ++     
Sbjct: 141 GELPLSLAACTKQWDVVSYLLENPHQPASLQATDSQGNTVLHALVXISDNSAENI----- 195
Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTK-------KGFTPLHLAAKY 535
                       AL  S  +G       L ++GA +  T +       +  TPL LAAK 
Sbjct: 196 ------------ALVTSXYDG-------LLQAGARLCPTVQLEDIRNLQDLTPLKLAAKE 236
Query: 536 GRMKIAQMLLQKD 548
           G+++I + +LQ++
Sbjct: 237 GKIEIFRHILQRE 249

>pdb|2F37|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Human Trpv2 Length = 251

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 44/187 (23%)
Query: 425 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGAS 484
           RG + LH+A        V++L+ NGA+V ARA                       Q G  
Sbjct: 94  RGHSALHIAIEKRSLQCVKLLVENGANVHARA------------------CGRFFQKGQG 135
Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESG---ASITATTKKGFTPLHLAAKYGRMKIA 541
                  G   L ++A   Q +V S L E+    AS+ AT  +G T LH           
Sbjct: 136 T--CFYFGELPLSLAACTKQWDVVSYLLENPHQPASLQATDSQGNTVLH----------- 182
Query: 542 QMLLQKDAPVDSQGKVASI---LTESGASITATTK-------KGFTPLHLAAKYGRMKIA 591
            ++   D   ++   V S    L ++GA +  T +       +  TPL LAAK G+++I 
Sbjct: 183 ALVXISDNSAENIALVTSXYDGLLQAGARLCPTVQLEDIRNLQDLTPLKLAAKEGKIEIF 242
Query: 592 QMLLQKD 598
           + +LQ++
Sbjct: 243 RHILQRE 249

>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESG-ASITATTKKGFTPLHLAAKYGRMKIAQM 543
           V+    +G TALH S       V   L +SG   +    + G++P+ L A      +A +
Sbjct: 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTA------LATL 157
Query: 544 LLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS 603
             Q D     Q      L   G      ++ G T L LA  +GR+ + + LL  +A V+ 
Sbjct: 158 KTQDDIETVLQ------LFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNV 211
Query: 604 QGKNGVTPLHVASHYDHQNVALLLLDRGASPHA----VAKNGYTPLHIAAKKNQMDIATT 659
           Q  +G T L  A  + H+ +A LLL   A P        ++G T L +A    Q +IA+ 
Sbjct: 212 QDDDGSTALMCACEHGHKEIAGLLL---AVPSCDISLTDRDGSTALMVALDAGQSEIASM 268
Query: 660 L 660
           L
Sbjct: 269 L 269

>pdb|2ETA|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of The Trpv2 Length = 256

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 80/186 (43%), Gaps = 33/186 (17%)
Query: 366 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVR 425
           +G + LH+A        V++L+ NGA V  RA              RF    Q       
Sbjct: 89  QGHSALHIAIEKRSLQCVKLLVENGADVHLRA------------CGRFFQKHQGTCFYF- 135
Query: 426 GETPLHLAARANQTDIVRILLRNG---ASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
           GE PL LAA   Q D+V  LL N    AS++A      T LH    + +           
Sbjct: 136 GELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIAD----------- 184
Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQ 542
              ++P     +AL I   +G  ++ + L  +      +  +G TPL LAAK G+++I +
Sbjct: 185 ---NSPEN---SALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFR 238
Query: 543 MLLQKD 548
            +LQ++
Sbjct: 239 HILQRE 244

>pdb|2ETC|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Trpv2 Length = 274

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 27/183 (14%)
Query: 366 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVR 425
           +G + LH+A        V++L+ NGA V  RA              RF    Q       
Sbjct: 102 QGHSALHIAIEKRSLQCVKLLVENGADVHLRA------------CGRFFQKHQGTCFYF- 148
Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
           GE PL LAA   Q D+V  LL N              L     LGN  + +L++    + 
Sbjct: 149 GELPLSLAACTKQWDVVTYLLENP--------HQPASLEATDSLGNTVLHALVM---IAD 197
Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           ++P     +AL I   +G  ++ + L  +      +  +G TPL LAAK G+++I + +L
Sbjct: 198 NSPEN---SALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHIL 254
Query: 546 QKD 548
           Q++
Sbjct: 255 QRE 257

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 100 YMAAQENHD-GVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKT 158
           +M A +N D   V+  ++KG +     E    PLH A   G++ ++E L+ KGA+I A  
Sbjct: 6   FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 65
Query: 159 RDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLH 199
           +  +TPL  A   GH + + +L+ KGA    K  +GL  L 
Sbjct: 66  KHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALE 106

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 565 GASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVA 624
           G  +  T + G  PLH AA  G+++I + LL K A +++  K+ +TPL  A +  H +  
Sbjct: 25  GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCV 84
Query: 625 LLLLDRGASPHAVAKNGYTPLHIAAKKNQ 653
            LLL +GA       +G T L   A  NQ
Sbjct: 85  KLLLSKGADKTVKGPDGLTALE--ATDNQ 111

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 730 GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLII 789
           G +++   + G  PLH A+  GQL ++ +L+  GA++NA      TPL  A  +G V  +
Sbjct: 25  GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCV 84
Query: 790 DLLLGAGAQ 798
            LLL  GA 
Sbjct: 85  KLLLSKGAD 93

>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With V-1 Length = 123

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 100 YMAAQENHD-GVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKT 158
           +M A +N D   V+  ++KG +     E    PLH A   G++ ++E L+ KGA+I A  
Sbjct: 11  FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 70
Query: 159 RDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGL 195
           +  +TPL  A   GH + + +L+ KGA    K  +GL
Sbjct: 71  KHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGL 107

>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With V-1 Length = 123

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 730 GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLII 789
           G +++   + G  PLH A+  GQL ++ +L+  GA++NA      TPL  A  +G V  +
Sbjct: 30  GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCV 89
Query: 790 DLLLGAGAQ 798
            LLL  GA 
Sbjct: 90  KLLLSKGAD 98

>pdb|1YMP|A Chain A, The Crystal Structure Of A Partial Mouse Notch-1 Ankyrin Domain: Repeats 4 Through 7 Preserve An Ankyrin Fold Length = 135

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 64/122 (52%)
Query: 287 LLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGC 346
           L +R  D +AR  +G TPL +A +     ++E L+   A + A  + G + LH A+ +  
Sbjct: 1   LRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN 60
Query: 347 MNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHV 406
           ++ A+ LL+ GA  D    + ETPL LAAR    +  ++LL + A+ D     D+ P  +
Sbjct: 61  VDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI 120
Query: 407 AS 408
           A 
Sbjct: 121 AQ 122

>pdb|1YMP|A Chain A, The Crystal Structure Of A Partial Mouse Notch-1 Ankyrin Domain: Repeats 4 Through 7 Preserve An Ankyrin Fold Length = 135

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 446 LRNGAS-VDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQ 504
           LRN A+ +DAR  +  TPL +A+RL    +   L+   A V+A    G +ALH +A    
Sbjct: 1   LRNRATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN 60
Query: 505 DEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
            + A +L ++GA+      K  TPL LAA+ G  + A++LL 
Sbjct: 61  VDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLD 102

>pdb|2VGE|A Chain A, Crystal Structure Of The C-Terminal Region Of Human Iaspp Length = 229

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 93  LNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGA 152
           LN    L  AA      VV+  + +  + +   E  IT LH A      ++V+ LI+ GA
Sbjct: 19  LNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGA 78
Query: 153 NIEAKTRDGLTPLHCAARSGHDNVIDI-LIEKGAALYSKT 191
           N+ +    G TPLHCAA S +D VI + L++ GAA+++ T
Sbjct: 79  NVNSPDSHGWTPLHCAA-SCNDTVICMALVQHGAAIFATT 117

>pdb|2VGE|A Chain A, Crystal Structure Of The C-Terminal Region Of Human Iaspp Length = 229

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 44/86 (51%)
Query: 315 KVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLA 374
           +VV+  +K     +   E G+T LH A      +I  FL+ AGA  ++    G TPLH A
Sbjct: 35  EVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCA 94
Query: 375 ARANQTDIVRILLRNGASVDARARED 400
           A  N T I   L+++GA++ A    D
Sbjct: 95  ASCNDTVICMALVQHGAAIFATTLSD 120

>pdb|2NYJ|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Trpv1 Length = 273

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 366 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVR 425
           +G+T LH+A       +V +L+ NGA V A A  D            F   ++       
Sbjct: 100 KGQTALHIAIERRNXTLVTLLVENGADVQAAANGD------------FFKKTKGRPGFYF 147
Query: 426 GETPLHLAARANQTDIVRILLRNG---ASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
           GE PL LAA  NQ  IV+ LL+N    A + AR     T LH    + +  + +      
Sbjct: 148 GELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKF--- 204
Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQ 542
                     Y  + I        + + L  +      T +KG TPL LAA  G++ +  
Sbjct: 205 ------VTSXYNEILI--------LGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLA 250
Query: 543 MLLQKD 548
            +LQ++
Sbjct: 251 YILQRE 256

>pdb|1D9S|A Chain A, Tumor Suppressor P15(Ink4b) Structure By Comparative Modeling And Nmr Data Length = 136

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
           H +  +    L  AA + Q++    LLE  A PNA ++ G  P+ +    G   ++ LL+
Sbjct: 6   HMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLL 64
Query: 695 EHGATVSHQAKNGLT-PLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQL 753
            HGA  +      LT P+H  A+E  ++   +    GA +D     G  P+ +A   G  
Sbjct: 65  LHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHR 124
Query: 754 NMVRYL 759
           ++ RYL
Sbjct: 125 DIARYL 130

>pdb|1BI7|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structure Of The Cdk6-P16ink4a Tumor Suppressor Complex Length = 156

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Query: 645 LHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA 704
           L  AA + +++    LLE  A PNA +  G  P+ +    G   ++ LL+ HGA  +   
Sbjct: 16  LATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVAELLLLHGAEPNCAD 74
Query: 705 KNGLT-PLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
              LT P+H  A+E  ++   +    GA +D     G  P+ +A   G  ++ RYL
Sbjct: 75  PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130

>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor Length = 222

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 29/182 (15%)
Query: 676 TPLHLSAQEGH----TDMSSLLIEHGAT-----------VSHQAKNGLTPLHLCAQEDKV 720
           TP  L  +EG     TD S      G +           V+ QA++   PLH  A+   +
Sbjct: 27  TPDELYIEEGDIIYITDXSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNL 86
Query: 721 NVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLV-ENGANVNATTNLGYTPLHQ 779
           +     + N   ++ + KAG T L+ A H G  ++V  L  +    +N    LG T LH 
Sbjct: 87  SWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFTQPNIELNQQNKLGDTALHA 146
Query: 780 ASQQGRVLIIDLLLGAGAQP-----------NATTNLFCCATILVKNGAEIDPVTKLSDE 828
           A+ +G   I+ LLL  GA+            +  TN  C + +  K G   D V  LS+ 
Sbjct: 147 AAWKGYADIVQLLLAKGARTDLRNIEKKLAFDXATNAACASLLKKKQGT--DAVRTLSNA 204
Query: 829 HE 830
            +
Sbjct: 205 ED 206

>pdb|1DC2|A Chain A, Solution Nmr Structure Of Tumor Suppressor P16ink4a, 20 Structures Length = 156

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Query: 645 LHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA 704
           L  AA + +++    LLE  A PNA +  G  P+ +    G   ++ LL+ HGA  +   
Sbjct: 16  LATAAARGRVEEVRALLEAGALPNAPNSYGRRPIQVMMM-GSARVAELLLLHGAEPNCAD 74
Query: 705 KNGLT-PLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
              LT P+H  A+E  ++   +    GA +D     G  P+ +A   G  ++ RYL
Sbjct: 75  PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130

>pdb|3LVR|E Chain E, The Crystal Structure Of Asap3 In Complex With Arf6 In Trans State Soaked With Calcium Length = 497

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 427 ETPLHLAAR-ANQTDI--VRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGA 483
           E  LHLA + ANQ  +  V  +++NG  +DA+A +  T LH A+     D   LLL+  A
Sbjct: 172 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 231
Query: 484 SVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKY 535
            V    + G TAL I+ K+   E   +L ++ A   A       PLH+   +
Sbjct: 232 LVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDYSW 277

>pdb|2B0O|E Chain E, Crystal Structure Of Uplc1 Gap Domain Length = 301

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 427 ETPLHLAAR-ANQTDI--VRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGA 483
           E  LHLA + ANQ  +  V  +++NG  +DA+A +  T LH A+     D   LLL+  A
Sbjct: 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250
Query: 484 SVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKY 535
            V    + G TAL I+ K+   E   +L ++ A   A       PLH+   +
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDYSW 296

>pdb|3T9K|A Chain A, Crystal Structure Of Acap1 C-portion Mutant S554d Fused With Integrin Beta1 Peptide Length = 390

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Query: 303 TPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDT 362
           TPL  A   N     E LL+ GA++     +G  PLH A+ +G   +A   L+ GA    
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296
Query: 363 ATVRGETPLHLAARANQTDIVRIL----LRNGASVDARAREDQTPLHVASRLRRFSSASQ 418
               G  PL +A      DIV +L    +R   +   +A  D+T L +       +S   
Sbjct: 297 RDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQA-GDETYLDIFRDFSLMASDDP 355
Query: 419 SALTR 423
             L+R
Sbjct: 356 EKLSR 360

>pdb|3T9K|A Chain A, Crystal Structure Of Acap1 C-portion Mutant S554d Fused With Integrin Beta1 Peptide Length = 390

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%)
Query: 428 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDA 487
           TPL  A  AN       LL+NGA+V+      + PLH A+ LG+  +A L L+ GA + A
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296
Query: 488 PTKDGYTALHISAKEGQDEVASIL 511
              +G   L I+ +    ++ ++L
Sbjct: 297 RDSEGRDPLTIAMETANADIVTLL 320

>pdb|3T9K|A Chain A, Crystal Structure Of Acap1 C-portion Mutant S554d Fused With Integrin Beta1 Peptide Length = 390

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 37/84 (44%)
Query: 577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA 636
           TPL  A     +   + LLQ  A V+     G  PLH A+   H  +A L L RGA   A
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296
Query: 637 VAKNGYTPLHIAAKKNQMDIATTL 660
               G  PL IA +    DI T L
Sbjct: 297 RDSEGRDPLTIAMETANADIVTLL 320

>pdb|4F1P|A Chain A, Crystal Structure Of Mutant S554d For Arfgap And Ank Repeat Domain Of Acap1 Length = 368

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Query: 303 TPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDT 362
           TPL  A   N     E LL+ GA++     +G  PLH A+ +G   +A   L+ GA    
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296
Query: 363 ATVRGETPLHLAARANQTDIVRIL----LRNGASVDARAREDQTPLHVASRLRRFSSASQ 418
               G  PL +A      DIV +L    +R   +   +A  D+T L +       +S   
Sbjct: 297 RDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQA-GDETYLDIFRDFSLMASDDP 355
Query: 419 SALTR 423
             L+R
Sbjct: 356 EKLSR 360

>pdb|4F1P|A Chain A, Crystal Structure Of Mutant S554d For Arfgap And Ank Repeat Domain Of Acap1 Length = 368

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%)
Query: 428 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDA 487
           TPL  A  AN       LL+NGA+V+      + PLH A+ LG+  +A L L+ GA + A
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296
Query: 488 PTKDGYTALHISAKEGQDEVASIL 511
              +G   L I+ +    ++ ++L
Sbjct: 297 RDSEGRDPLTIAMETANADIVTLL 320

>pdb|4F1P|A Chain A, Crystal Structure Of Mutant S554d For Arfgap And Ank Repeat Domain Of Acap1 Length = 368

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 37/84 (44%)
Query: 577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA 636
           TPL  A     +   + LLQ  A V+     G  PLH A+   H  +A L L RGA   A
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296
Query: 637 VAKNGYTPLHIAAKKNQMDIATTL 660
               G  PL IA +    DI T L
Sbjct: 297 RDSEGRDPLTIAMETANADIVTLL 320

>pdb|3JUE|A Chain A, Crystal Structure Of Arfgap And Ank Repeat Domain Of Acap1 Length = 368

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Query: 303 TPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDT 362
           TPL  A   N     E LL+ GA++     +G  PLH A+ +G   +A   L+ GA    
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296
Query: 363 ATVRGETPLHLAARANQTDIVRIL----LRNGASVDARAREDQTPLHVASRLRRFSSASQ 418
               G  PL +A      DIV +L    +R   +   +A  D+T L +       +S   
Sbjct: 297 RDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQA-GDETYLDIFRDFSLMASDDP 355
Query: 419 SALTR 423
             L+R
Sbjct: 356 EKLSR 360

>pdb|3JUE|A Chain A, Crystal Structure Of Arfgap And Ank Repeat Domain Of Acap1 Length = 368

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%)
Query: 428 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDA 487
           TPL  A  AN       LL+NGA+V+      + PLH A+ LG+  +A L L+ GA + A
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296
Query: 488 PTKDGYTALHISAKEGQDEVASIL 511
              +G   L I+ +    ++ ++L
Sbjct: 297 RDSEGRDPLTIAMETANADIVTLL 320

>pdb|3JUE|A Chain A, Crystal Structure Of Arfgap And Ank Repeat Domain Of Acap1 Length = 368

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 37/84 (44%)
Query: 577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA 636
           TPL  A     +   + LLQ  A V+     G  PLH A+   H  +A L L RGA   A
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296
Query: 637 VAKNGYTPLHIAAKKNQMDIATTL 660
               G  PL IA +    DI T L
Sbjct: 297 RDSEGRDPLTIAMETANADIVTLL 320

>pdb|1DCQ|A Chain A, Crystal Structure Of The Arf-Gap Domain And Ankyrin Repeats Of Papbeta Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 347 MNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHV 406
           ++I  FL+Q     D  T +G T LH     +  + +++LLR  AS++      +TPL +
Sbjct: 185 LHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 244
Query: 407 ASRLR 411
           A RL+
Sbjct: 245 AKRLK 249

>pdb|1DCQ|A Chain A, Crystal Structure Of The Arf-Gap Domain And Ankyrin Repeats Of Papbeta Length = 278

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 427 ETPLHLAARA---NQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGA 483
           ET LHLA R+       IV  L++N  ++D +  +  T LH      N +   LLL+  A
Sbjct: 170 ETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKA 229
Query: 484 SVDAPTKDGYTALHISAKEGQDEVASILTES 514
           S++   + G T L I+ +   +    +LT++
Sbjct: 230 SIEIANESGETPLDIAKRLKHEHCEELLTQA 260

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	838
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-144
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-143
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-142
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-141
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-137
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-111
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-97
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-61
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-107
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-107
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-105
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-103
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-101
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	8e-92
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-82
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	6e-80
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-99
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	8e-99
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-98
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-98
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-97
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-92
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-82
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-77
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-58
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-46
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	5e-88
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-85
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	6e-85
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-81
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-80
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-74
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-61
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-54
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-14
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	7e-86
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-82
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-82
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-80
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-77
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-75
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-74
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	6e-68
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	6e-48
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-38
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-05
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-83
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-78
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-77
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	3e-75
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-74
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-72
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	9e-68
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-47
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-33
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-28
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	9e-04
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-81
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-81
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	8e-81
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-79
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	6e-79
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	4e-73
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	7e-62
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	6e-36
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-31
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-81
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-74
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-69
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-68
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	6e-67
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-66
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	7e-62
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-57
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	6e-43
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	8e-09
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	9e-81
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	9e-80
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-79
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	5e-79
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-58
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-52
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-19
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-78
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-72
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-71
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-70
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-69
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	9e-68
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-63
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-37
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	8e-25
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-23
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-78
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-76
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-76
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-75
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	6e-75
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-73
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-70
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-57
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-53
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-76
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	6e-72
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-71
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-71
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	6e-68
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-67
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	5e-67
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	7e-66
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	8e-55
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	8e-49
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	5e-21
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	5e-06
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-76
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-75
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-74
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	9e-73
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-72
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-71
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-70
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-61
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-54
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	8e-45
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-37
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	8e-10
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-74
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-70
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-70
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-68
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-66
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-61
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-53
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	5e-44
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-34
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-12
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-68
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-61
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-60
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-60
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-60
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-59
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-59
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-56
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-55
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-46
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-34
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-23
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-16
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-68
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	6e-65
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-65
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-63
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-62
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-61
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	4e-61
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-59
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	4e-44
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-27
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	8e-09
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-63
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-63
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-62
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-61
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-59
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	8e-59
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	8e-59
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-55
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-48
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-37
2rfa_A	232	Transient receptor potential cation channel subfa	2e-60
2rfa_A	232	Transient receptor potential cation channel subfa	4e-55
2rfa_A	232	Transient receptor potential cation channel subfa	6e-54
2rfa_A	232	Transient receptor potential cation channel subfa	9e-53
2rfa_A	232	Transient receptor potential cation channel subfa	9e-52
2rfa_A	232	Transient receptor potential cation channel subfa	1e-46
2rfa_A	232	Transient receptor potential cation channel subfa	1e-46
2rfa_A	232	Transient receptor potential cation channel subfa	8e-44
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	4e-60
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-58
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-56
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-54
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	7e-52
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-51
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	8e-50
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-49
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	8e-40
3hra_A	201	Ankyrin repeat family protein; structural protein;	5e-57
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-51
3hra_A	201	Ankyrin repeat family protein; structural protein;	4e-51
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-50
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-50
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-49
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-48
3hra_A	201	Ankyrin repeat family protein; structural protein;	5e-48
3hra_A	201	Ankyrin repeat family protein; structural protein;	4e-47
3hra_A	201	Ankyrin repeat family protein; structural protein;	7e-47
3hra_A	201	Ankyrin repeat family protein; structural protein;	5e-46
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-39
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-31
3hra_A	201	Ankyrin repeat family protein; structural protein;	4e-16
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-56
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-56
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-56
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-56
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-55
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	4e-55
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-54
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-53
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	4e-53
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-50
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-50
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	5e-42
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-25
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-14
3v30_A	172	DNA-binding protein rfxank; structural genomics co	5e-55
3v30_A	172	DNA-binding protein rfxank; structural genomics co	6e-54
3v30_A	172	DNA-binding protein rfxank; structural genomics co	6e-54
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-53
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-53
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-50
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-50
3v30_A	172	DNA-binding protein rfxank; structural genomics co	4e-50
3v30_A	172	DNA-binding protein rfxank; structural genomics co	5e-46
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-41
2pnn_A	273	Transient receptor potential cation channel subfa	7e-55
2pnn_A	273	Transient receptor potential cation channel subfa	5e-46
2pnn_A	273	Transient receptor potential cation channel subfa	2e-45
2pnn_A	273	Transient receptor potential cation channel subfa	4e-43
2pnn_A	273	Transient receptor potential cation channel subfa	3e-40
2pnn_A	273	Transient receptor potential cation channel subfa	4e-38
2pnn_A	273	Transient receptor potential cation channel subfa	1e-28
2pnn_A	273	Transient receptor potential cation channel subfa	1e-23
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-54
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-54
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-53
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	7e-49
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	9e-46
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-44
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	8e-41
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	3e-35
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-54
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-52
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-52
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-52
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-52
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-52
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-51
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-50
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-48
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-47
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-41
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	5e-40
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-29
2etb_A	256	Transient receptor potential cation channel subfam	3e-54
2etb_A	256	Transient receptor potential cation channel subfam	9e-46
2etb_A	256	Transient receptor potential cation channel subfam	3e-45
2etb_A	256	Transient receptor potential cation channel subfam	4e-43
2etb_A	256	Transient receptor potential cation channel subfam	2e-38
2etb_A	256	Transient receptor potential cation channel subfam	2e-35
2etb_A	256	Transient receptor potential cation channel subfam	5e-26
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	5e-54
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-53
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	5e-53
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	8e-53
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	9e-52
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-51
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	5e-50
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-49
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-49
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	5e-49
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-46
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-38
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	4e-25
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	8e-54
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	5e-51
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-50
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-50
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-50
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	7e-50
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	9e-50
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-49
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-48
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-50
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-49
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-49
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	6e-48
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-44
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-44
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-43
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-43
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-42
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-39
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-21
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-50
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	5e-47
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-45
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-44
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	7e-43
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-42
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-42
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	8e-42
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-41
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	5e-41
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-40
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-35
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-33
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-14
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-07
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-49
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-47
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-47
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-47
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-47
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-46
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	7e-46
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	7e-46
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-45
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-44
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-44
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	7e-44
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-41
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-48
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-45
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-44
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	4e-43
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-43
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-42
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-42
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	9e-42
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-41
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-48
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-48
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	4e-48
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	3e-46
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	5e-46
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-45
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	3e-43
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	8e-43
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	8e-41
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	6e-26
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	9e-08
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	3e-46
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	6e-46
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	7e-46
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	4e-45
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	6e-45
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	4e-44
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-42
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	3e-42
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-41
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-41
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-38
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	8e-36
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	3e-19
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-46
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-45
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-44
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-43
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-43
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-43
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-43
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-42
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-41
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	6e-40
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-37
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-35
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-15
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	5e-44
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-43
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	9e-43
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-42
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	6e-42
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	7e-42
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-41
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	4e-41
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	4e-40
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	7e-40
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	8e-40
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-38
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	4e-37
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	9e-28
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-14
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-44
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-42
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-40
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-40
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-39
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-37
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-37
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	7e-37
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	9e-37
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-36
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-36
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-35
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-27
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	6e-43
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	7e-43
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-42
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-42
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-41
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-41
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	7e-41
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-40
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-40
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-40
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	6e-40
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	8e-39
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	7e-30
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-20
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	4e-19
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	7e-43
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	6e-40
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	7e-40
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	4e-38
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	9e-36
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	8e-23
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	7e-12
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	5e-10
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-08
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	9e-42
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-40
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	6e-40
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-39
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	8e-39
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	9e-39
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	7e-38
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-37
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-36
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-36
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-36
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-35
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-35
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-26
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	7e-22
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-12
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-09
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-41
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	5e-41
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-39
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	8e-39
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	9e-39
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	7e-38
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-37
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-37
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-37
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	7e-37
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-36
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-36
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-35
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	6e-27
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-22
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-09
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-06
3jxi_A	260	Vanilloid receptor-related osmotically activated p	8e-40
3jxi_A	260	Vanilloid receptor-related osmotically activated p	7e-37
3jxi_A	260	Vanilloid receptor-related osmotically activated p	8e-36
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-35
3jxi_A	260	Vanilloid receptor-related osmotically activated p	5e-35
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-31
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-28
3jxi_A	260	Vanilloid receptor-related osmotically activated p	8e-17
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-39
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-34
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-34
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	7e-34
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-33
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	6e-33
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	7e-33
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-31
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-31
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-31
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-30
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-30
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-29
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-26
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-39
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	6e-37
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-36
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-35
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-34
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-29
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	9e-23
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	4e-15
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	7e-38
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-37
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-37
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-37
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-37
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-36
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-35
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	6e-32
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-30
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	4e-17
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-37
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-36
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-34
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-34
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-33
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-32
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-32
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-32
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-32
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	7e-32
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	7e-32
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-31
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-29
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-24
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	7e-37
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-36
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-35
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-34
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-34
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	7e-34
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	8e-34
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-32
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-32
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	4e-32
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-31
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	4e-31
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-30
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-27
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	5e-21
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-33
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-30
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-29
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-28
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	8e-27
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-26
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-26
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-26
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-26
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-25
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	6e-25
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-24
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-24
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-22
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-21
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-20
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-31
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-29
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-29
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-27
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	6e-27
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	7e-27
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-26
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-25
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-25
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-25
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-24
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	7e-24
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	8e-22
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-18
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-11
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	4e-19
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-18
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	7e-18
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	4e-17
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-16
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-16
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-16
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-15
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-14
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	4e-14
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	4e-14
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-13
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-12
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-11
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	7e-11
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-10
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-09
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-08
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-04
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	5e-17
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	9e-17
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	5e-16
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	6e-16
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-15
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-15
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-14
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-12
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-12
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-11
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-11
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	5e-11
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-10
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-10
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-10
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-10
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-09
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-09
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-08
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-16
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	5e-16
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	7e-16
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-15
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-15
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	6e-15
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	8e-14
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-13
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	4e-13
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-12
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	1e-11
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-11
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-11
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	8e-11
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-08
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	4e-07
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	8e-14
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	1e-13
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	3e-12
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	1e-11
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	8e-11
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	1e-10
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-10
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	5e-09
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	5e-09
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	8e-09
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	7e-08
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-07
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	7e-07
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	7e-07
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-06

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  432 bits (1114), Expect = e-144
 Identities = 178/379 (46%), Positives = 254/379 (67%), Gaps = 17/379 (4%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
           G TPLH+A+      IV+ LL+ GAS +    + +TPLH+A+R G+ ++A  LLQ+ A V
Sbjct: 14  GLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 73

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           +A  KD  T LH +A+ G   +  +L E+ A+    T  G TPLH+AA+ G ++    LL
Sbjct: 74  NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALL 133

Query: 546 QKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG 605
           +K                  AS    TKKGFTPLH+AAKYG++++A++LL++DA  ++ G
Sbjct: 134 EK-----------------EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAG 176

Query: 606 KNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
           KNG+TPLHVA H+++ ++  LLL RG SPH+ A NGYTPLHIAAK+NQ+++A +LL+Y  
Sbjct: 177 KNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG 236

Query: 666 KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATI 725
             NAES  G TPLHL+AQEGH +M +LL+   A  +   K+GLTPLHL AQE  V VA +
Sbjct: 237 SANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADV 296

Query: 726 TMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGR 785
            + +G  +D  T+ G+TPLH+ASH+G + +V++L+++ A+VNA T LGY+PLHQA+QQG 
Sbjct: 297 LIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGH 356

Query: 786 VLIIDLLLGAGAQPNATTN 804
             I+ LLL  GA PN  ++
Sbjct: 357 TDIVTLLLKNGASPNEVSS 375

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  429 bits (1107), Expect = e-143
 Identities = 152/467 (32%), Positives = 231/467 (49%), Gaps = 48/467 (10%)

Query: 116 SKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDN 175
           S G +     E  +TPLHVA   G + +V+ L+ +GA+         TPLH AAR+GH  
Sbjct: 2   SPGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTE 61

Query: 176 VIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVAS 235
           V   L++  A + +K K+   PLH A++  H    ++L+ + A  +  T    T LH+A+
Sbjct: 62  VAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAA 121

Query: 236 HCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPN 295
             GHV     LL+++A        GFTPLH+A K           V VA+ LL+R A PN
Sbjct: 122 REGHVETVLALLEKEASQACMTKKGFTPLHVAAKY--------GKVRVAELLLERDAHPN 173

Query: 296 ARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQ 355
           A   NG TPLH+A   N   +V+LLL  G S  +   +G TPLH+A+    + +A  LLQ
Sbjct: 174 AAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQ 233

Query: 356 AGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSS 415
            G + +  +V+G TPLHLAA+    ++V +LL   A+ +   +                 
Sbjct: 234 YGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKS---------------- 277

Query: 416 ASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIA 475
                     G TPLHL A+     +  +L+++G  VDA  R   TPLHVAS  GN  + 
Sbjct: 278 ----------GLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLV 327

Query: 476 SLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKY 535
             LLQH A V+A TK GY+ LH +A++G  ++ ++L ++GAS    +  G TPL +A + 
Sbjct: 328 KFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRL 387

Query: 536 GRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLA 582
           G + +  +L                +T+  + +  + K   +     
Sbjct: 388 GYISVTDVLKV--------------VTDETSFVLVSDKHRMSFPETV 420

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  426 bits (1099), Expect = e-142
 Identities = 153/452 (33%), Positives = 232/452 (51%), Gaps = 37/452 (8%)

Query: 84  NGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAM 143
            G +      +G TPL++A+   H  +V+ LL +G +  ++     TPLH+A + G   +
Sbjct: 3   PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEV 62

Query: 144 VELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQ 203
            + L+   A + AK +D  TPLHCAAR GH N++ +L+E  A     T  G  PLH+A++
Sbjct: 63  AKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAR 122

Query: 204 GDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTP 263
             H      L+   A    +T    T LHVA+  G VRVA+ LL+R A PNA   NG TP
Sbjct: 123 EGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTP 182

Query: 264 LHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKY 323
           LH+A         H N++ + K LL R   P++ A NG+TPLHIA K+N+ +V   LL+Y
Sbjct: 183 LHVAV--------HHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQY 234

Query: 324 GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIV 383
           G S  A +  G+TPLH+A+  G   +   LL   A  +     G TPLHL A+     + 
Sbjct: 235 GGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVA 294

Query: 384 RILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVR 443
            +L+++G  VDA  R                           G TPLH+A+      +V+
Sbjct: 295 DVLIKHGVMVDATTRM--------------------------GYTPLHVASHYGNIKLVK 328

Query: 444 ILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEG 503
            LL++ A V+A+ +   +PLH A++ G+ DI +LLL++GAS +  + DG T L I+ + G
Sbjct: 329 FLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLG 388

Query: 504 QDEVASIL---TESGASITATTKKGFTPLHLA 532
              V  +L   T+  + +  + K   +     
Sbjct: 389 YISVTDVLKVVTDETSFVLVSDKHRMSFPETV 420

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  424 bits (1092), Expect = e-141
 Identities = 163/486 (33%), Positives = 252/486 (51%), Gaps = 59/486 (12%)

Query: 357 GAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSA 416
           G +       G TPLH+A+      IV+ LL+ GAS +                      
Sbjct: 4   GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSN------------------- 44

Query: 417 SQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIAS 476
                  V+ ETPLH+AARA  T++ + LL+N A V+A+A++DQTPLH A+R+G+ ++  
Sbjct: 45  -------VKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVK 97

Query: 477 LLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYG 536
           LLL++ A+ +  T  G+T LHI+A+EG  E    L E  AS    TKKGFTPLH+AAKYG
Sbjct: 98  LLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYG 157

Query: 537 RMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 596
           ++++A++LL++                  A   A  K G TPLH+A  +  + I ++LL 
Sbjct: 158 KVRVAELLLER-----------------DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLP 200

Query: 597 KDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDI 656
           +     S   NG TPLH+A+  +   VA  LL  G S +A +  G TPLH+AA++   ++
Sbjct: 201 RGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEM 260

Query: 657 ATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQ 716
              LL   A  N  +K+G TPLHL AQEGH  ++ +LI+HG  V    + G TPLH+ + 
Sbjct: 261 VALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASH 320

Query: 717 EDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTP 776
              + +    + + A+++  TK G++PLH A+  G  ++V  L++NGA+ N  ++ G TP
Sbjct: 321 YGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTP 380

Query: 777 LHQASQQGRVLIIDLLLGA---GAQPNAT----TNLFCCATILVKNGAEIDPVTKLSDEH 829
           L  A + G + + D+L       +    +     +       ++             DE 
Sbjct: 381 LAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPETVDEILDVSE---------DEG 431

Query: 830 EKSIDL 835
           E+ I  
Sbjct: 432 EELISF 437

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  413 bits (1065), Expect = e-137
 Identities = 149/446 (33%), Positives = 221/446 (49%), Gaps = 44/446 (9%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G   + K L+  GA+ NV ++   TPL+MAA+  H  V +YLL          + + TPL
Sbjct: 25  GHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPL 84

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H A + G   MV+LL+   AN    T  G TPLH AAR GH   +  L+EK A+    TK
Sbjct: 85  HCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTK 144

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
            G  PLH+A++        +L+   A  +    + LT LHVA H  ++ + K LL R   
Sbjct: 145 KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS 204

Query: 253 PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN 312
           P++ A NG+TPLHIA K+        N V VA++LL      NA ++ G TPLH+A ++ 
Sbjct: 205 PHSPAWNGYTPLHIAAKQ--------NQVEVARSLLQYGGSANAESVQGVTPLHLAAQEG 256

Query: 313 RYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLH 372
             ++V LLL   A+     +SGLTPLH+ +  G + +A  L++ G   D  T  G TPLH
Sbjct: 257 HAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLH 316

Query: 373 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHL 432
           +A+      +V+ LL++ A V+A+ +                           G +PLH 
Sbjct: 317 VASHYGNIKLVKFLLQHQADVNAKTKL--------------------------GYSPLHQ 350

Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLL---LQHGASVDAPT 489
           AA+   TDIV +LL+NGAS +  + +  TPL +A RLG   +  +L       + V    
Sbjct: 351 AAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSD 410

Query: 490 KDGYTALHI-------SAKEGQDEVA 508
           K   +           S  EG++ ++
Sbjct: 411 KHRMSFPETVDEILDVSEDEGEELIS 436

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  344 bits (886), Expect = e-111
 Identities = 121/416 (29%), Positives = 195/416 (46%), Gaps = 55/416 (13%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
           + GH  V   LL+N    + K K     LH AA+                          
Sbjct: 56  RAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARI------------------------- 90

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                          G   + K+L++N A  N+ +  G TPL++AA+E H   V  LL K
Sbjct: 91  ---------------GHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 135

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI 177
             +Q   T+   TPLHVA K+GKV + ELL+ + A+  A  ++GLTPLH A    + +++
Sbjct: 136 EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIV 195

Query: 178 DILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHC 237
            +L+ +G + +S   NG  PLH+A++ +     R L+ +G   +  +V  +T LH+A+  
Sbjct: 196 KLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQE 255

Query: 238 GHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNAR 297
           GH  +   LL ++A+ N    +G TPLH+  ++         HV VA  L+      +A 
Sbjct: 256 GHAEMVALLLSKQANGNLGNKSGLTPLHLVAQE--------GHVPVADVLIKHGVMVDAT 307

Query: 298 ALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAG 357
              G+TPLH+A      K+V+ LL++ A + A T+ G +PLH A+  G  +I   LL+ G
Sbjct: 308 TRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG 367

Query: 358 AAPDTATVRGETPLHLAARANQTDIVRILLR---NGASVDARAREDQTPLHVASRL 410
           A+P+  +  G TPL +A R     +  +L       + V    +   +       +
Sbjct: 368 ASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPETVDEI 423

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  309 bits (795), Expect = 2e-97
 Identities = 102/397 (25%), Positives = 167/397 (42%), Gaps = 64/397 (16%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
           + GH  +V +LLEN    +         LHIAA++                         
Sbjct: 89  RIGHTNMVKLLLENNANPNLATTAGHTPLHIAARE------------------------- 123

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                          G  E    L++  A+    +  GFTPL++AA+     V   LL +
Sbjct: 124 ---------------GHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER 168

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI 177
             +   A ++ +TPLHVA     + +V+LL+ +G +  +   +G TPLH AA+     V 
Sbjct: 169 DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVA 228

Query: 178 DILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHC 237
             L++ G +  +++  G+ PLH+A+Q  H     +L+   A  +      LT LH+ +  
Sbjct: 229 RSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQE 288

Query: 238 GHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNAR 297
           GHV VA  L+      +A    G+TPLH+A            ++ + K LL  +AD NA+
Sbjct: 289 GHVPVADVLIKHGVMVDATTRMGYTPLHVASHY--------GNIKLVKFLLQHQADVNAK 340

Query: 298 ALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQA- 356
              G++PLH A ++    +V LLLK GAS    +  G TPL +A  +G +++   L    
Sbjct: 341 TKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT 400

Query: 357 --GAAPDTATVRGETPLHLAARANQTDIVRILLRNGA 391
              +    +     +             V  +L    
Sbjct: 401 DETSFVLVSDKHRMSFPE---------TVDEILDVSE 428

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  213 bits (545), Expect = 2e-61
 Identities = 79/306 (25%), Positives = 126/306 (41%), Gaps = 64/306 (20%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
              +  +V +LL       +        LHIAAK+                         
Sbjct: 188 HHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQ------------------------- 222

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                           Q EVA+ L+  G + N +S+ G TPL++AAQE H  +V  LLSK
Sbjct: 223 ---------------NQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSK 267

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI 177
             N  L  +  +TPLH+  + G V + ++LI  G  ++A TR G TPLH A+  G+  ++
Sbjct: 268 QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLV 327

Query: 178 DILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHC 237
             L++  A + +KTK G +PLH A+Q  H     +L+ +GA  +E++ D  T L +A   
Sbjct: 328 KFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRL 387

Query: 238 GHVRVAKTL---LDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADP 294
           G++ V   L    D  +       +  +                        +LD   D 
Sbjct: 388 GYISVTDVLKVVTDETSFVLVSDKHRMSFPET-----------------VDEILDVSEDE 430

Query: 295 NARALN 300
               ++
Sbjct: 431 GEELIS 436

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  333 bits (857), Expect = e-107
 Identities = 77/386 (19%), Positives = 131/386 (33%), Gaps = 58/386 (15%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
               +H+AAR  QTD VR L+  G S   + R   T LH+A + G  D A  L   G   
Sbjct: 20  NMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH 79

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
                 G   +H++    + ++   L E         ++G  P  L  +    ++ +   
Sbjct: 80  SL--WHGQKPIHLAVMANKTDLVVALVEGAK------ERGQMPESLLNECDEREVNE--- 128

Query: 546 QKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYG--RMKIAQMLLQKDAPVDS 603
                                       KG T LH     G   +++ ++L+Q  A   +
Sbjct: 129 --------------------IGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA 168

Query: 604 QGKNGVTPLHVASHYDHQNVALLLLDRGASPH-----AVAKNGYTPLHIAAKKNQMDIAT 658
           + K   TPL  A  + ++    L++D   S          K G + LH A   N  D+A 
Sbjct: 169 KDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAM 228

Query: 659 TLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQED 718
             +E     N E      PL+LS +     ++  L++       QA     P H      
Sbjct: 229 RFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQA----CPYH------ 278

Query: 719 KVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLH 778
                     NG  + P        +  A+   +  +++ L E    V  + N G     
Sbjct: 279 ----------NGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAV 328

Query: 779 QASQQGRVLIIDLLLGAGAQPNATTN 804
           +  ++    +  + L   A     + 
Sbjct: 329 KRKKKAAPAVKRMKLAPSAPVRTRSR 354

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  332 bits (853), Expect = e-107
 Identities = 65/384 (16%), Positives = 128/384 (33%), Gaps = 44/384 (11%)

Query: 124 ATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEK 183
           + + N+  +HVA + G+   V  LI  G +   + R G T LH A + G  +    L   
Sbjct: 16  SDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASV 75

Query: 184 GAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVA 243
           G        +G  P+H+A   +       L+       +          + + C    V 
Sbjct: 76  GEVH--SLWHGQKPIHLAVMANKTDLVVALVEGAKERGQ------MPESLLNECDEREVN 127

Query: 244 KTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFT 303
                 +   + +   G T LH              ++ + K L+   A P A+     T
Sbjct: 128 ------EIGSHVKHCKGQTALHWCVGLG------PEYLEMIKILVQLGASPTAKDKADET 175

Query: 304 PLHIACKKNRYKVVELLLKY-----GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGA 358
           PL  A +    + ++L++          +    + G + LH A  +   ++A+  ++ G 
Sbjct: 176 PLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGI 235

Query: 359 APDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQ---TPLHVASRLRRFSS 415
             +        PL+L+ RA    + + LL+       +A       T L           
Sbjct: 236 DVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLP---------- 285

Query: 416 ASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIA 475
                  RV     +  AA  ++ +++++L      V               +     + 
Sbjct: 286 ------DRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVK 339

Query: 476 SLLLQHGASVDAPTKDGYTALHIS 499
            + L   A V   ++    +  +S
Sbjct: 340 RMKLAPSAPVRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  327 bits (840), Expect = e-105
 Identities = 70/404 (17%), Positives = 137/404 (33%), Gaps = 55/404 (13%)

Query: 250 KADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIAC 309
           K +           +H+A +K              + L++    P  +   G T LH+AC
Sbjct: 10  KLNRIKSDDENMEKIHVAARKG--------QTDEVRRLIETGVSPTIQNRFGCTALHLAC 61

Query: 310 KKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGET 369
           K       + L   G   +     G  P+H+A      ++ + L++          RG+ 
Sbjct: 62  KFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVMANKTDLVVALVEGAK------ERGQM 113

Query: 370 PLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETP 429
           P  L    ++ ++             +  + QT LH    L                   
Sbjct: 114 PESLLNECDEREVN------EIGSHVKHCKGQTALHWCVGLGP----------------- 150

Query: 430 LHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLL-----QHGAS 484
                     ++++IL++ GAS  A+ + D+TPL  A    N +   L++     +    
Sbjct: 151 -------EYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLR 203

Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
           +D   K G + LH +     ++VA    E G  +     +   PL+L+ +   + + + L
Sbjct: 204 LDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKEL 263

Query: 545 LQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQ 604
           LQK      Q    +    +G ++          +  AA   + ++ Q+L +K   V   
Sbjct: 264 LQKTDVFLIQ----ACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRS 319

Query: 605 GKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIA 648
              G              V  + L   A     +++      ++
Sbjct: 320 LNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  322 bits (828), Expect = e-103
 Identities = 67/410 (16%), Positives = 127/410 (30%), Gaps = 67/410 (16%)

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN 378
           +      +   + +  +  +HVA+  G  +    L++ G +P      G T LHLA +  
Sbjct: 5   MTDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFG 64

Query: 379 QTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQ 438
             D  + L   G                                   G+ P+HLA  AN+
Sbjct: 65  CVDTAKYLASVGEVHSLW----------------------------HGQKPIHLAVMANK 96

Query: 439 TDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHI 498
           TD+V  L+             Q P  + +     ++                 G TALH 
Sbjct: 97  TDLVVALVEGAKERG------QMPESLLNECDEREVN------EIGSHVKHCKGQTALHW 144

Query: 499 SAKEGQD--EVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGK 556
               G +  E+  IL + GAS TA  K   TPL  A ++   +   +++           
Sbjct: 145 CVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSK----- 199

Query: 557 VASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVAS 616
                  S   +    K+G + LH A       +A   ++    V+ +      PL+++ 
Sbjct: 200 -------SSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSV 252

Query: 617 HYDHQNVALLLLDRGAS-------------PHAVAKNGYTPLHIAAKKNQMDIATTLLEY 663
                 +   LL +                           +  AA  ++ ++   L E 
Sbjct: 253 RAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEK 312

Query: 664 NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHL 713
             +       G        ++    +  + +   A V  ++++      +
Sbjct: 313 LDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAV 362

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  317 bits (815), Expect = e-101
 Identities = 65/407 (15%), Positives = 124/407 (30%), Gaps = 68/407 (16%)

Query: 146 LLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGD 205
           +      N      + +  +H AAR G  + +  LIE G +   + + G   LH+A +  
Sbjct: 5   MTDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFG 64

Query: 206 HEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLH 265
                + L   G             +H+A       +   L++   +       G  P  
Sbjct: 65  CVDTAKYLASVGEVHSL--WHGQKPIHLAVMANKTDLVVALVEGAKE------RGQMPES 116

Query: 266 IACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACK--KNRYKVVELLLKY 323
           +         + C+   V       +   + +   G T LH          +++++L++ 
Sbjct: 117 LL--------NECDEREVN------EIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL 162

Query: 324 GASIAATTESGLTPLHVASFMGCMNIAIFLL-----QAGAAPDTATVRGETPLHLAARAN 378
           GAS  A  ++  TPL  A           ++     ++    D A  +G + LH A   N
Sbjct: 163 GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILIN 222

Query: 379 QTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQ 438
             D+    +  G  V+    E                             PL+L+ RA  
Sbjct: 223 WEDVAMRFVEMGIDVNMEDNE--------------------------HTVPLYLSVRAAM 256

Query: 439 TDIVRILL-------------RNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
             + + LL              NG +V          +  A+     ++  LL +    V
Sbjct: 257 VLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEV 316

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLA 532
                 G        K+    V  +     A +   ++       ++
Sbjct: 317 VRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  292 bits (750), Expect = 8e-92
 Identities = 60/355 (16%), Positives = 107/355 (30%), Gaps = 42/355 (11%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           GQ +  + L++ G +  +Q+  G T L++A +       +YL S G   +    H   P+
Sbjct: 31  GQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHS--LWHGQKPI 88

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H+A    K  +V  L+            G  P           V +I          K  
Sbjct: 89  HLAVMANKTDLVVALVEGAKE------RGQMPESLLNECDEREVNEIGSHV------KHC 136

Query: 193 NGLAPLHMASQ--GDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRK 250
            G   LH       ++    ++L+  GA          T L  A    +      ++D  
Sbjct: 137 KGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTV 196

Query: 251 -----ADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPL 305
                   +     G + LH A           N   VA   ++   D N        PL
Sbjct: 197 PSKSSLRLDYANKQGNSHLHWAILI--------NWEDVAMRFVEMGIDVNMEDNEHTVPL 248

Query: 306 HIACKKNRYKVVELLL-------------KYGASIAATTESGLTPLHVASFMGCMNIAIF 352
           +++ +     + + LL               G ++       L  +  A+      +   
Sbjct: 249 YLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQL 308

Query: 353 LLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVA 407
           L +       +   G        +     + R+ L   A V  R+R       V+
Sbjct: 309 LQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  267 bits (685), Expect = 3e-82
 Identities = 61/397 (15%), Positives = 117/397 (29%), Gaps = 86/397 (21%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
           ++G    V  L+E       + +    ALH+A K                          
Sbjct: 29  RKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKF------------------------- 63

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                          G  + AK L   G   ++   +G  P+++A   N   +V  L+  
Sbjct: 64  ---------------GCVDTAKYLASVGEVHSLW--HGQKPIHLAVMANKTDLVVALVEG 106

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSG--HDN 175
              +         P  +  +  +  + E           K   G T LH     G  +  
Sbjct: 107 AKER------GQMPESLLNECDEREVNE------IGSHVKHCKGQTALHWCVGLGPEYLE 154

Query: 176 VIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIY-----HGAGVDEITVDYLTA 230
           +I IL++ GA+  +K K    PL  A +  +  A  +++          +D       + 
Sbjct: 155 MIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSH 214

Query: 231 LHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDR 290
           LH A       VA   ++   D N        PL+++ +           V + K LL +
Sbjct: 215 LHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAA--------MVLLTKELLQK 266

Query: 291 KA-------------DPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTP 337
                                +     +  A   ++ +V++LL +    +  +  +G   
Sbjct: 267 TDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGG 326

Query: 338 LHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLA 374
                      +    L   A   T +        ++
Sbjct: 327 AVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  260 bits (668), Expect = 6e-80
 Identities = 62/383 (16%), Positives = 129/383 (33%), Gaps = 64/383 (16%)

Query: 475 ASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAK 534
            S+      +      +    +H++A++GQ +    L E+G S T   + G T LHLA K
Sbjct: 3   GSMTDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACK 62

Query: 535 YGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 594
           +G +  A+ L                    G   +     G  P+HLA    +  +   L
Sbjct: 63  FGCVDTAKYLASV-----------------GEVHSL--WHGQKPIHLAVMANKTDLVVAL 103

Query: 595 LQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQ- 653
           ++         + G  P  + +  D + V           H     G T LH        
Sbjct: 104 VEGAK------ERGQMPESLLNECDEREVN------EIGSHVKHCKGQTALHWCVGLGPE 151

Query: 654 -MDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIE-----HGATVSHQAKNG 707
            +++   L++  A P A+ KA  TPL  + +  + +   L+++         + +  K G
Sbjct: 152 YLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQG 211

Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN-- 765
            + LH     +  +VA   +  G +++        PL+++     + + + L++      
Sbjct: 212 NSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFL 271

Query: 766 -----------VNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN-----LFC-- 807
                      V     +    +  A+   +  ++ LL     +   + N          
Sbjct: 272 IQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRK 331

Query: 808 ------CATILVKNGAEIDPVTK 824
                    + +   A +   ++
Sbjct: 332 KKAAPAVKRMKLAPSAPVRTRSR 354

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  312 bits (803), Expect = e-99
 Identities = 92/402 (22%), Positives = 144/402 (35%), Gaps = 58/402 (14%)

Query: 107 HDG-VVRYLLSKGGNQTLATEHNITPLHVACKWG-KVAMVELLISKGANIEAKTRDGLTP 164
             G     L        L  E+    L  A + G +  ++ LL     N  A      TP
Sbjct: 2   EFGKSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTP 61

Query: 165 LHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEIT 224
           LH AA      ++ +L++ GA +++K K GL PLH A    H   T +L+ HGA V+ + 
Sbjct: 62  LHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMD 121

Query: 225 VDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVA 284
           +   T LH A+    V V   LL   ADP     +G + + +A                 
Sbjct: 122 LWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTP--------ELRERL 173

Query: 285 KTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFM 344
                           G + L  A + +  KV + L     +     +S  T LH A   
Sbjct: 174 TYEFK-----------GHSLLQAAREADLAKVKKTLALEIINFKQ-PQSHETALHCAVAS 221

Query: 345 GCMN---IAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQ 401
                  +A  LL+ GA  +       TPLH+AA     D++ +L ++GA ++A      
Sbjct: 222 LHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSL-- 279

Query: 402 TPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQT 461
                                   G+T LH AA A      R+LL  G+     + +  T
Sbjct: 280 ------------------------GQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFT 315

Query: 462 PLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEG 503
              + +     +    +L     +     D    L  ++K G
Sbjct: 316 AAQMGN-----EAVQQILSESTPMRT--SDVDYRLLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  310 bits (797), Expect = 8e-99
 Identities = 82/383 (21%), Positives = 149/383 (38%), Gaps = 51/383 (13%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGD-IASLLLQHGAS 484
           G++ L LA                A         +  L  A+R GN + + +LL     +
Sbjct: 4   GKSALDLAD-------------PSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVN 50

Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
             A      T LH++A   +  +  +L + GA + A  K G  PLH A  YG  ++ ++L
Sbjct: 51  CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELL 110

Query: 545 LQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQ 604
           L+                  GA + A     FTPLH AA   R+++  +LL   A     
Sbjct: 111 LKH-----------------GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLV 153

Query: 605 GKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN 664
             +G + + +A   + +                   G++ L  A + +        L   
Sbjct: 154 NCHGKSAVDMAPTPELRERLTYEFK-----------GHSLLQAAREADL-AKVKKTLALE 201

Query: 665 AKPNAESKAGFTPLHLSAQEGH---TDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVN 721
                + ++  T LH +    H     ++ LL+  GA V+ + K+ +TPLH+ A+    +
Sbjct: 202 IINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHND 261

Query: 722 VATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQAS 781
           V  +   +GA+++ +   G T LH A+  G L   R L+  G++ +  +  G+T     +
Sbjct: 262 VMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN 321

Query: 782 QQGRVLIIDLLLGAGAQPNATTN 804
           +      +  +L        +  
Sbjct: 322 E-----AVQQILSESTPMRTSDV 339

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  310 bits (796), Expect = 1e-98
 Identities = 92/421 (21%), Positives = 145/421 (34%), Gaps = 77/421 (18%)

Query: 367 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRG 426
           G++ L LA                A         +  L                      
Sbjct: 4   GKSALDLAD-------------PSAKAVLTGEYKKDELL--------------------- 29

Query: 427 ETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVD 486
                 A   N+  ++ +L     +  A      TPLH+A+      I  LLLQHGA V 
Sbjct: 30  ----EAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVH 85

Query: 487 APTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
           A  K G   LH +   G  EV  +L + GA + A     FTPLH AA   R+++  +LL 
Sbjct: 86  AKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLS 145

Query: 547 KDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGK 606
                             GA  T     G + + +A      +                 
Sbjct: 146 H-----------------GADPTLVNCHGKSAVDMAPTPELRERLTYEF----------- 177

Query: 607 NGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKK---NQMDIATTLLEY 663
            G + L  A   D   V   L           ++  T LH A       +  +A  LL  
Sbjct: 178 KGHSLLQAAREADLAKVKKTL-ALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRK 236

Query: 664 NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
            A  N ++K   TPLH++A+  H D+  +L +HGA ++     G T LH  A    +   
Sbjct: 237 GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTC 296

Query: 724 TITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQ 783
            + +  G++   ++  GFT   + +       V+ ++     +  +       L +AS+ 
Sbjct: 297 RLLLSYGSDPSIISLQGFTAAQMGN-----EAVQQILSESTPMRTSDV--DYRLLEASKA 349

Query: 784 G 784
           G
Sbjct: 350 G 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  308 bits (791), Expect = 6e-98
 Identities = 88/400 (22%), Positives = 150/400 (37%), Gaps = 57/400 (14%)

Query: 76  EVAKILVDNGATINVQSLNGFTPLYMAAQENH-DGVVRYLLSKGGNQTLATEHNITPLHV 134
           + A  L D  A   +        L  AA+  + + ++  L     N   +     TPLH+
Sbjct: 5   KSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHL 64

Query: 135 ACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNG 194
           A  + +V +V+LL+  GA++ AK + GL PLH A   GH  V ++L++ GA + +     
Sbjct: 65  AAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQ 124

Query: 195 LAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPN 254
             PLH A+  +      +L+ HGA    +     +A+ +A                    
Sbjct: 125 FTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFK------ 178

Query: 255 ARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKK--- 311
                G + L  A +           +   K  L  +     +  +  T LH A      
Sbjct: 179 -----GHSLLQAARE---------ADLAKVKKTLALEIINFKQPQSHETALHCAVASLHP 224

Query: 312 NRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPL 371
            R +V ELLL+ GA++    +  +TPLHVA+     ++   L + GA  +     G+T L
Sbjct: 225 KRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTAL 284

Query: 372 HLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLH 431
           H AA A      R+LL  G+     + +  T   + +                       
Sbjct: 285 HRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN----------------------- 321

Query: 432 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGN 471
                   + V+ +L     +     +    L  AS+ G+
Sbjct: 322 --------EAVQQILSESTPMR--TSDVDYRLLEASKAGD 351

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  306 bits (787), Expect = 3e-97
 Identities = 81/337 (24%), Positives = 134/337 (39%), Gaps = 24/337 (7%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
            +E++  +L       +       TPL++AA  N   +V+ LL  G +     +  + PL
Sbjct: 36  NEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPL 95

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H AC +G   + ELL+  GA + A      TPLH AA      V  +L+  GA       
Sbjct: 96  HNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNC 155

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
           +G + + MA   +                        +L  A+    +   K  L  +  
Sbjct: 156 HGKSAVDMAPTPELRERLTYEFKGH------------SLLQAAREADLAKVKKTLALEII 203

Query: 253 PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN 312
              +  +  T LH A         H     VA+ LL + A+ N +  +  TPLH+A ++ 
Sbjct: 204 NFKQPQSHETALHCAVASL-----HPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERA 258

Query: 313 RYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLH 372
              V+E+L K+GA + A    G T LH A+  G +     LL  G+ P   +++G T   
Sbjct: 259 HNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQ 318

Query: 373 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASR 409
           +       + V+ +L     +     +    L  AS+
Sbjct: 319 MGN-----EAVQQILSESTPMR--TSDVDYRLLEASK 348

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  294 bits (755), Expect = 1e-92
 Identities = 87/366 (23%), Positives = 145/366 (39%), Gaps = 41/366 (11%)

Query: 471 NGDIASLLLQHGASVDAPTKDGYTALHISAKEG-QDEVASILTESGASITATTKKGFTPL 529
            G  A  L    A      +     L  +A+ G ++++ ++LT    +  A+  +  TPL
Sbjct: 3   FGKSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPL 62

Query: 530 HLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMK 589
           HLAA Y R++I Q+LLQ                  GA + A  K G  PLH A  YG  +
Sbjct: 63  HLAAGYNRVRIVQLLLQH-----------------GADVHAKDKGGLVPLHNACSYGHYE 105

Query: 590 IAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAA 649
           + ++LL+  A V++      TPLH A+  +   V  LLL  GA P  V  +G + + +A 
Sbjct: 106 VTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAP 165

Query: 650 KKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLT 709
                +  T   +           G + L  + +     +   L         Q ++  T
Sbjct: 166 TPELRERLTYEFK-----------GHSLLQAAREADLAKVKKTLALEII-NFKQPQSHET 213

Query: 710 PLHLCAQEDKVNVATITMF---NGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
            LH            +       GA ++   K   TPLH+A+     +++  L ++GA +
Sbjct: 214 ALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKM 273

Query: 767 NATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN-----LFC---CATILVKNGAE 818
           NA  +LG T LH+A+  G +    LLL  G+ P+  +                ++     
Sbjct: 274 NALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEAVQQILSESTP 333

Query: 819 IDPVTK 824
           +     
Sbjct: 334 MRTSDV 339

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  267 bits (684), Expect = 3e-82
 Identities = 77/382 (20%), Positives = 126/382 (32%), Gaps = 74/382 (19%)

Query: 4   GHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTK 59
             ++++A+L             K   LH+AA                             
Sbjct: 36  NEEKLMALLTPLNVNCHASDGRKSTPLHLAAGY--------------------------- 68

Query: 60  LEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGG 119
                         +  + ++L+ +GA ++ +   G  PL+ A    H  V   LL  G 
Sbjct: 69  -------------NRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGA 115

Query: 120 NQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDI 179
                     TPLH A    +V +  LL+S GA+       G + +  A        +  
Sbjct: 116 CVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTY 175

Query: 180 LIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGH 239
                         G + L  A + D     + L        +    + TALH A    H
Sbjct: 176 EF-----------KGHSLLQAAREADLAKVKKTLALEII-NFKQPQSHETALHCAVASLH 223

Query: 240 ---VRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNA 296
               +VA+ LL + A+ N +  +  TPLH+A ++         H  V + L    A  NA
Sbjct: 224 PKRKQVAELLLRKGANVNEKNKDFMTPLHVAAER--------AHNDVMEVLHKHGAKMNA 275

Query: 297 RALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQA 356
               G T LH A      +   LLL YG+  +  +  G T   + +          +L  
Sbjct: 276 LDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN-----EAVQQILSE 330

Query: 357 GAAPDTATVRGETPLHLAARAN 378
                T+    +  L  A++A 
Sbjct: 331 STPMRTSD--VDYRLLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  253 bits (650), Expect = 2e-77
 Identities = 86/351 (24%), Positives = 144/351 (41%), Gaps = 57/351 (16%)

Query: 490 KDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA 549
           + G +AL              L +  A    T +     L  AA+ G  +          
Sbjct: 2   EFGKSALD-------------LADPSAKAVLTGEYKKDELLEAARSGNEE---------- 38

Query: 550 PVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGV 609
                 K+ ++LT    +  A+  +  TPLHLAA Y R++I Q+LLQ  A V ++ K G+
Sbjct: 39  ------KLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGL 92

Query: 610 TPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNA 669
            PLH A  Y H  V  LLL  GA  +A+    +TPLH AA KN++++ + LL + A P  
Sbjct: 93  VPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTL 152

Query: 670 ESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN 729
            +  G + + ++      +  +   +             + L    + D   V    +  
Sbjct: 153 VNCHGKSAVDMAPTPELRERLTYEFKGH-----------SLLQAAREADLAKVKKT-LAL 200

Query: 730 GAEIDPVTKAGFTPLHIAS---HFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRV 786
                   ++  T LH A    H  +  +   L+  GANVN       TPLH A+++   
Sbjct: 201 EIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHN 260

Query: 787 LIIDLLLGAGAQPNATTN-----LFCCA--------TILVKNGAEIDPVTK 824
            ++++L   GA+ NA  +     L   A         +L+  G++   ++ 
Sbjct: 261 DVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISL 311

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  201 bits (515), Expect = 2e-58
 Identities = 65/318 (20%), Positives = 110/318 (34%), Gaps = 74/318 (23%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
             GH  V  +LL++    +     +   LH AA K                         
Sbjct: 100 SYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASK------------------------- 134

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                           + EV  +L+ +GA   + + +G + + MA        + Y    
Sbjct: 135 ---------------NRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG 179

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI 177
                       + L  A +     + + L  +  N   + +   T LHCA  S H    
Sbjct: 180 H-----------SLLQAAREADLAKVKKTLALEIINF-KQPQSHETALHCAVASLHPKRK 227

Query: 178 DI---LIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVA 234
            +   L+ KGA +  K K+ + PLH+A++  H     VL  HGA ++ +     TALH A
Sbjct: 228 QVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRA 287

Query: 235 SHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADP 294
           +  GH++  + LL   +DP+  +L GFT   +  +               + +L      
Sbjct: 288 ALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNE-------------AVQQILSESTPM 334

Query: 295 NARALNGFTPLHIACKKN 312
                +    L  A K  
Sbjct: 335 RTS--DVDYRLLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  169 bits (430), Expect = 1e-46
 Identities = 48/218 (22%), Positives = 77/218 (35%), Gaps = 16/218 (7%)

Query: 605 GKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAA-KKNQMDIATTLLEY 663
           G+ G + L              L D  A      +     L  AA   N+  +   L   
Sbjct: 1   GEFGKSALD-------------LADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPL 47

Query: 664 NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
           N   +A      TPLHL+A      +  LL++HGA V  + K GL PLH         V 
Sbjct: 48  NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVT 107

Query: 724 TITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQ 783
            + + +GA ++ +    FTPLH A+   ++ +   L+ +GA+       G + +  A   
Sbjct: 108 ELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTP 167

Query: 784 GRVLIIDLLLGAGAQPNATT--NLFCCATILVKNGAEI 819
                +       +   A    +L      L       
Sbjct: 168 ELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINF 205

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  277 bits (710), Expect = 7e-86
 Identities = 74/387 (19%), Positives = 129/387 (33%), Gaps = 66/387 (17%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
            +  L  A+        R  L++ +           P       GN  +      +    
Sbjct: 37  SQHSLLEASYDGYIKRQRNELQHYS---------LYPNPQGYGNGNDFLGDFNHTNLQIP 87

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
             P  +    LH  A  G   +   +T    +I    +   T LH  A     + ++ L+
Sbjct: 88  TEPEPESPIKLHTEAA-GSYAITEPITRESVNI-IDPRHNRTVLHWIASNSSAEKSEDLI 145

Query: 546 QKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG 605
             +A              +GA + A      TPL LA    R ++   L++  A      
Sbjct: 146 VHEA---------KECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYN 196

Query: 606 KNGVTPLHVASHYDHQNVALLLLD---RGASPHAVAKNGYTPLHIAAKKN---QMDIATT 659
           K+  + LH A+      + + +L+          + +NG T L I A      Q+  A  
Sbjct: 197 KSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKL 256

Query: 660 LLEYNAKPN--------AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPL 711
           L+E  AK +        +E   G T LH +AQ  +  +   L+                 
Sbjct: 257 LVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE--------------- 301

Query: 712 HLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTN 771
                             G+  D   + G TP+ +A+  G++ +V YL++ GA+V A   
Sbjct: 302 -----------------KGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDA 344

Query: 772 LGYTPLHQASQQGRVLIIDLLLGAGAQ 798
             +T    A       I+D+      +
Sbjct: 345 TDHTARQLAQANNHHNIVDIFDRCRPE 371

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  268 bits (687), Expect = 1e-82
 Identities = 71/377 (18%), Positives = 129/377 (34%), Gaps = 36/377 (9%)

Query: 149 SKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEA 208
            K              L  A+  G+       ++            L P        ++ 
Sbjct: 25  EKNRKNHQSITSSQHSLLEASYDGYIKRQRNELQ---------HYSLYPNPQGYGNGNDF 75

Query: 209 ATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIAC 268
                  +     E   +    LH  +  G   + + +     +      +  T LH   
Sbjct: 76  LGDFNHTNLQIPTEPEPESPIKLHTEAA-GSYAITEPITRESVNIIDPR-HNRTVLHWIA 133

Query: 269 KKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIA 328
             +  + S    V  AK  +   AD NA   +  TPL +A    R ++V  L+K GA   
Sbjct: 134 SNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPT 193

Query: 329 ATTESGLTPLHVASFMGCMNIAIFLLQ---AGAAPDTATVRGETPLHLAARANQTD---I 382
              +S  + LH A+      + +++L         +     G T L + A     D    
Sbjct: 194 IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVAS 253

Query: 383 VRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIV 442
            ++L+  GA VD      +                     + +G T LH AA+ +   IV
Sbjct: 254 AKLLVEKGAKVDYDGAARKD------------------SEKYKGRTALHYAAQVSNMPIV 295

Query: 443 RILLR-NGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAK 501
           + L+   G++ D +  + +TP+ +A++ G  ++   L+Q GASV+A     +TA  ++  
Sbjct: 296 KYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQA 355

Query: 502 EGQDEVASILTESGASI 518
                +  I        
Sbjct: 356 NNHHNIVDIFDRCRPER 372

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  267 bits (686), Expect = 2e-82
 Identities = 75/393 (19%), Positives = 132/393 (33%), Gaps = 61/393 (15%)

Query: 289 DRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMN 348
           ++    +    +    L  A      K     L++           L P       G   
Sbjct: 25  EKNRKNHQSITSSQHSLLEASYDGYIKRQRNELQHY---------SLYPNPQGYGNGNDF 75

Query: 349 IAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVAS 408
           +  F       P          LH  A A    I   + R   ++     + +       
Sbjct: 76  LGDFNHTNLQIPTEPEPESPIKLHTEA-AGSYAITEPITRESVNII----DPR------- 123

Query: 409 RLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRN--------GASVDARAREDQ 460
                              T LH  A  +  +    L+ +        GA V+A   ++ 
Sbjct: 124 ----------------HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDEN 167

Query: 461 TPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASIL---TESGAS 517
           TPL +A       + + L++ GA      K   +ALH +A      +   +   T+    
Sbjct: 168 TPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD 227

Query: 518 ITATTKKGFTPLHLAAKYG---RMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKK 574
           I    + G T L + A      ++  A++L+        +G  A +  +  A   +   K
Sbjct: 228 IEELDRNGMTALMIVAHNEGRDQVASAKLLV-------EKG--AKVDYDGAARKDSEKYK 278

Query: 575 GFTPLHLAAKYGRMKIAQMLL-QKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGAS 633
           G T LH AA+   M I + L+ +K +  D Q ++G TP+ +A+      V + L+ +GAS
Sbjct: 279 GRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS 338

Query: 634 PHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK 666
             AV    +T   +A   N  +I         +
Sbjct: 339 VEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  262 bits (672), Expect = 2e-80
 Identities = 69/337 (20%), Positives = 114/337 (33%), Gaps = 27/337 (8%)

Query: 78  AKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACK 137
           A          N        P        +D +  +  +     T     +   LH    
Sbjct: 44  ASYDGYIKRQRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAA 103

Query: 138 WGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILI--------EKGAALYS 189
            G  A+ E +  +  NI    R   T LH  A +      + LI          GA + +
Sbjct: 104 -GSYAITEPITRESVNI-IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNA 161

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR 249
              +   PL +A           L+  GA          +ALH A+      +   +L+ 
Sbjct: 162 MDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNS 221

Query: 250 K---ADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARAL------- 299
                D      NG T L I            + V  AK L+++ A  +           
Sbjct: 222 TKLKGDIEELDRNGMTALMIVAHNE-----GRDQVASAKLLVEKGAKVDYDGAARKDSEK 276

Query: 300 -NGFTPLHIACKKNRYKVVELLL-KYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAG 357
             G T LH A + +   +V+ L+ + G++     E G TP+ +A+  G + + ++L+Q G
Sbjct: 277 YKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG 336

Query: 358 AAPDTATVRGETPLHLAARANQTDIVRILLRNGASVD 394
           A+ +       T   LA   N  +IV I  R     +
Sbjct: 337 ASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPERE 373

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  254 bits (650), Expect = 3e-77
 Identities = 73/402 (18%), Positives = 118/402 (29%), Gaps = 77/402 (19%)

Query: 388 RNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLR 447
                        Q  L  AS         Q    +     P           +      
Sbjct: 25  EKNRKNHQSITSSQHSLLEASYD--GYIKRQRNELQHYSLYPNPQGYGNGNDFLGDFNHT 82

Query: 448 NGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEV 507
           N         E    LH  +  G+  I   + +   ++    +   T LH  A     E 
Sbjct: 83  NLQIPTEPEPESPIKLHTEAA-GSYAITEPITRESVNIID-PRHNRTVLHWIASNSSAEK 140

Query: 508 ASIL--------TESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVAS 559
           +  L          +GA + A      TPL LA    R ++   L++             
Sbjct: 141 SEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKA------------ 188

Query: 560 ILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD---APVDSQGKNGVTPLHVAS 616
                GA  T   K   + LH AA      +   +L        ++   +NG+T L + +
Sbjct: 189 -----GADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVA 243

Query: 617 ---HYDHQNVALLLLDRGA--------SPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN- 664
                D    A LL+++GA           +    G T LH AA+ + M I   L+    
Sbjct: 244 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG 303

Query: 665 AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVAT 724
           +  + + + G TP+ L+AQEG  ++   LI+                             
Sbjct: 304 SNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ---------------------------- 335

Query: 725 ITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
                GA ++ V     T   +A      N+V          
Sbjct: 336 -----GASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  249 bits (637), Expect = 2e-75
 Identities = 72/397 (18%), Positives = 123/397 (30%), Gaps = 85/397 (21%)

Query: 229 TALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLL 288
            +L  AS+ G+++  +  L               P                + ++     
Sbjct: 39  HSLLEASYDGYIKRQRNELQH---------YSLYPNPQG--------YGNGNDFLGDFNH 81

Query: 289 DRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMN 348
                P          LH       Y + E + +   +I        T LH  +      
Sbjct: 82  TNLQIPTEPEPESPIKLHTEAA-GSYAITEPITRESVNIIDP-RHNRTVLHWIASNSSAE 139

Query: 349 IAIFLL--------QAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARARED 400
            +  L+         AGA  +       TPL LA  A +  +V  L++ GA      +  
Sbjct: 140 KSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKS- 198

Query: 401 QTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRN---GASVDARAR 457
                                      + LH AA      ++  +L +      ++   R
Sbjct: 199 -------------------------ERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR 233

Query: 458 EDQTPLHVASRLGNGD---IASLLLQHGASV--------DAPTKDGYTALHISAKEGQDE 506
              T L + +     D    A LL++ GA V        D+    G TALH +A+     
Sbjct: 234 NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMP 293

Query: 507 VASIL-TESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESG 565
           +   L  E G++     + G TP+ LAA+ GR+++   L+Q+                 G
Sbjct: 294 IVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ-----------------G 336

Query: 566 ASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 602
           AS+ A      T   LA       I  +  +     +
Sbjct: 337 ASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPERE 373

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  246 bits (630), Expect = 3e-74
 Identities = 62/309 (20%), Positives = 114/309 (36%), Gaps = 33/309 (10%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G + +      N              L+  A      +   +  +  N      HN T L
Sbjct: 72  GNDFLGDFNHTNLQIPTEPEPESPIKLHTEAA-GSYAITEPITRESVNII-DPRHNRTVL 129

Query: 133 HVACKWGKVAMVELLI--------SKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKG 184
           H           E LI        + GA++ A   D  TPL  A  +    ++  L++ G
Sbjct: 130 HWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAG 189

Query: 185 AALYSKTKNGLAPLHMASQGDHEAATRVLIYH---GAGVDEITVDYLTALHVASHCGH-- 239
           A      K+  + LH A+          ++        ++E+  + +TAL + +H     
Sbjct: 190 ADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRD 249

Query: 240 -VRVAKTLLDRKADPNARAL--------NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDR 290
            V  AK L+++ A  +             G T LH A        +  +++ + K L+  
Sbjct: 250 QVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYA--------AQVSNMPIVKYLVGE 301

Query: 291 K-ADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNI 349
           K ++ + +  +G TP+ +A ++ R +VV  L++ GAS+ A   +  T   +A      NI
Sbjct: 302 KGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNI 361

Query: 350 AIFLLQAGA 358
                +   
Sbjct: 362 VDIFDRCRP 370

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  229 bits (585), Expect = 6e-68
 Identities = 66/375 (17%), Positives = 122/375 (32%), Gaps = 64/375 (17%)

Query: 482 GASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIA 541
                        +L  ++ +G  +      +              P       G   + 
Sbjct: 27  NRKNHQSITSSQHSLLEASYDGYIKRQRNELQ---------HYSLYPNPQGYGNGNDFLG 77

Query: 542 QMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPV 601
                                      T    +    LH  A  G   I + + ++   +
Sbjct: 78  DFNHTN-----------------LQIPTEPEPESPIKLHTEAA-GSYAITEPITRESVNI 119

Query: 602 DSQGKNGVTPLHVASHYDHQNVALLLL--------DRGASPHAVAKNGYTPLHIAAKKNQ 653
               ++  T LH  +       +  L+          GA  +A+  +  TPL +A    +
Sbjct: 120 I-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARR 178

Query: 654 MDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH---GATVSHQAKNGLTP 710
             +   L++  A P   +K+  + LH +A      M   ++        +    +NG+T 
Sbjct: 179 RRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTA 238

Query: 711 LHLCAQE---DKVNVATITMFNGAEIDPVTKA--------GFTPLHIASHFGQLNMVRYL 759
           L + A     D+V  A + +  GA++D    A        G T LH A+    + +V+YL
Sbjct: 239 LMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYL 298

Query: 760 V-ENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN-----LFC------ 807
           V E G+N +     G TP+  A+Q+GR+ ++  L+  GA   A                 
Sbjct: 299 VGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNH 358

Query: 808 --CATILVKNGAEID 820
                I  +   E +
Sbjct: 359 HNIVDIFDRCRPERE 373

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  173 bits (441), Expect = 6e-48
 Identities = 45/261 (17%), Positives = 77/261 (29%), Gaps = 25/261 (9%)

Query: 563 ESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQN 622
           E       +       L  A+  G +K  +  LQ            + P        +  
Sbjct: 25  EKNRKNHQSITSSQHSLLEASYDGYIKRQRNELQH---------YSLYPNPQGYGNGNDF 75

Query: 623 VALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSA 682
           +          P          LH  A      I   +   +     + +   T LH  A
Sbjct: 76  LGDFNHTNLQIPTEPEPESPIKLHTEA-AGSYAITEPITRESVNII-DPRHNRTVLHWIA 133

Query: 683 QEGHTDMSSLLIEH--------GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID 734
                + S  LI H        GA V+    +  TPL L     +  +    M  GA+  
Sbjct: 134 SNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPT 193

Query: 735 PVTKAGFTPLHIASHFGQLNMVRYLVEN---GANVNATTNLGYTPLHQASQQG---RVLI 788
              K+  + LH A+      M+ Y++ +     ++      G T L   +      +V  
Sbjct: 194 IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVAS 253

Query: 789 IDLLLGAGAQPNATTNLFCCA 809
             LL+  GA+ +        +
Sbjct: 254 AKLLVEKGAKVDYDGAARKDS 274

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  146 bits (371), Expect = 2e-38
 Identities = 32/164 (19%), Positives = 60/164 (36%), Gaps = 15/164 (9%)

Query: 73  GQEEVAKILVDN---GATINVQSLNGFTPLYMAAQENHDG---VVRYLLSKGGNQTLATE 126
               +   ++++      I     NG T L + A           + L+ KG        
Sbjct: 210 RDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGA 269

Query: 127 HNI--------TPLHVACKWGKVAMVELLIS-KGANIEAKTRDGLTPLHCAARSGHDNVI 177
                      T LH A +   + +V+ L+  KG+N + +  DG TP+  AA+ G   V+
Sbjct: 270 ARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVV 329

Query: 178 DILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVD 221
             LI++GA++ +          +A   +H     +        +
Sbjct: 330 MYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPERE 373

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 46.1 bits (110), Expect = 3e-05
 Identities = 13/104 (12%), Positives = 23/104 (22%), Gaps = 21/104 (20%)

Query: 729 NGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLI 788
              +      +    L  AS+ G +   R  +++             P  Q    G   +
Sbjct: 26  KNRKNHQSITSSQHSLLEASYDGYIKRQRNELQHY---------SLYPNPQGYGNGNDFL 76

Query: 789 IDLLLGAGAQPNATTN-----LFCCAT-------ILVKNGAEID 820
            D        P          L   A         + +    I 
Sbjct: 77  GDFNHTNLQIPTEPEPESPIKLHTEAAGSYAITEPITRESVNII 120

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  267 bits (685), Expect = 2e-83
 Identities = 66/289 (22%), Positives = 102/289 (35%), Gaps = 33/289 (11%)

Query: 426 GETPLHLAARANQTDIVRILLRNGA---SVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
           G+T LHLA        +  LL   A    +D +    QT LH+A+ LG       L   G
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68

Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGASITA-------------TTKKGFTPL 529
           A V    + G+TALH++ +      A +L +   S                T      P 
Sbjct: 69  AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA 128

Query: 530 HLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMK 589
            + ++                            +    + A    G TPLH+A  +   +
Sbjct: 129 AVDSQPNPENE----------------EEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAE 172

Query: 590 IAQMLLQKDAPVDSQGKN-GVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIA 648
           + ++L    A ++      G TPLH+A      +V  LLL  GA P A    G TPL  A
Sbjct: 173 MVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSA 232

Query: 649 AKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHG 697
             +    +A  L  + A    +     +P   S  +  +D      E+ 
Sbjct: 233 LLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGDEYD 281

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  254 bits (650), Expect = 2e-78
 Identities = 66/304 (21%), Positives = 99/304 (32%), Gaps = 31/304 (10%)

Query: 88  INVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTL---ATEHNITPLHVACKWGKVAMV 144
               + +G T L++A    H+  + +LL             +   T LH+A   G+ + V
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61

Query: 145 ELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQG 204
           E L + GA +    R G T LH A R        +L++   +      +           
Sbjct: 62  EKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTP 121

Query: 205 DHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPL 264
           D                     +  A   +             D +    A   +G TPL
Sbjct: 122 DT-------------------SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162

Query: 265 HIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALN-GFTPLHIACKKNRYKVVELLLKY 323
           H+A               + + L D  AD N      G TPLH+A +     V+ELLLK 
Sbjct: 163 HVAVIHK--------DAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA 214

Query: 324 GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIV 383
           GA   A    G TPL  A       +A  L   GA          +P   +   + +D  
Sbjct: 215 GADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNR 274

Query: 384 RILL 387
               
Sbjct: 275 DEGD 278

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  251 bits (644), Expect = 1e-77
 Identities = 64/269 (23%), Positives = 99/269 (36%), Gaps = 9/269 (3%)

Query: 460 QTPLHVASRLGNGDIASLLLQHGA---SVDAPTKDGYTALHISAKEGQDEVASILTESGA 516
            T LH+A    +      LL   A    +D     G TALH++A  G+      L  +GA
Sbjct: 10  DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGA 69

Query: 517 SITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGF 576
            +    + G T LHLA +      A +LLQ             +          T     
Sbjct: 70  GVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDC----TPDTSH 125

Query: 577 TPLHLAAKYGRMK-IAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPH 635
            P  + ++                 ++++  +G TPLHVA  +    +  LL D GA  +
Sbjct: 126 APAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN 185

Query: 636 AVAKN-GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
                 G TPLH+A +     +   LL+  A P A    G TPL  +    +  ++ LL 
Sbjct: 186 KPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLR 245

Query: 695 EHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
            HGA       + L+P      +   +  
Sbjct: 246 AHGAPEPEDGGDKLSPCSSSGSDSDSDNR 274

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  245 bits (628), Expect = 3e-75
 Identities = 64/289 (22%), Positives = 96/289 (33%), Gaps = 29/289 (10%)

Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPL 579
             T+ G T LHLA  +        LL   A                  +      G T L
Sbjct: 4   YVTEDGDTALHLAVIHQHEPFLDFLLGFSA--------------GHEYLDLQNDLGQTAL 49

Query: 580 HLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP----- 634
           HLAA  G     + L    A V    + G T LH+A        A +LL    S      
Sbjct: 50  HLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDAS 109

Query: 635 --------HAVAKNGYTPLHIAAKKN-QMDIATTLLEYNAKPNAESKAGFTPLHLSAQEG 685
                          + P  + ++ N + +      ++  +  AE+  G TPLH++    
Sbjct: 110 DTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHK 169

Query: 686 HTDMSSLLIEHGATVSHQAKN-GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPL 744
             +M  LL + GA ++      G TPLHL  +    +V  + +  GA+       G TPL
Sbjct: 170 DAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPL 229

Query: 745 HIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
             A       + R L  +GA          +P   +         D   
Sbjct: 230 GSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGD 278

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  243 bits (624), Expect = 1e-74
 Identities = 66/266 (24%), Positives = 94/266 (35%), Gaps = 10/266 (3%)

Query: 154 IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS---KTKNGLAPLHMASQGDHEAAT 210
               T DG T LH A    H+  +D L+   A       +   G   LH+A+     +  
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61

Query: 211 RVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKK 270
             L   GAGV        TALH+A        A  LL  +      A + +      C  
Sbjct: 62  EKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTP 121

Query: 271 NR------YKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYG 324
           +         S             D +    A   +G TPLH+A      ++V LL   G
Sbjct: 122 DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAG 181

Query: 325 ASI-AATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIV 383
           A +       G TPLH+A      ++   LL+AGA P      G TPL  A       + 
Sbjct: 182 ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILA 241

Query: 384 RILLRNGASVDARAREDQTPLHVASR 409
           R+L  +GA       +  +P   +  
Sbjct: 242 RLLRAHGAPEPEDGGDKLSPCSSSGS 267

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  238 bits (610), Expect = 1e-72
 Identities = 52/270 (19%), Positives = 90/270 (33%), Gaps = 26/270 (9%)

Query: 73  GQEEVAKILVDNGA---TINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNI 129
             E     L+   A    +++Q+  G T L++AA       V  L + G    +A     
Sbjct: 20  QHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGH 79

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTP--------------LHCAARSGHDN 175
           T LH+AC+        +L+    +      D                     +  +  + 
Sbjct: 80  TALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENE 139

Query: 176 VIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDY-LTALHVA 234
                 +    L ++  +G  PLH+A         R+L   GA +++       T LH+A
Sbjct: 140 EEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLA 199

Query: 235 SHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADP 294
                  V + LL   ADP AR   G TPL  A  +         +  +A+ L    A  
Sbjct: 200 VEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP--------NPILARLLRAHGAPE 251

Query: 295 NARALNGFTPLHIACKKNRYKVVELLLKYG 324
                +  +P   +   +     +   +Y 
Sbjct: 252 PEDGGDKLSPCSSSGSDSDSDNRDEGDEYD 281

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  225 bits (576), Expect = 9e-68
 Identities = 56/253 (22%), Positives = 91/253 (35%), Gaps = 18/253 (7%)

Query: 570 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDA---PVDSQGKNGVTPLHVASHYDHQNVALL 626
             T+ G T LHLA  +        LL   A    +D Q   G T LH+A+     +    
Sbjct: 4   YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK 63

Query: 627 LLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE-------------SKA 673
           L   GA      + G+T LH+A +      A  LL+       +                
Sbjct: 64  LYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123

Query: 674 GFTPLHLSAQE-GHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAE 732
              P  + +Q     +      +    +  +  +G TPLH+        +  +    GA+
Sbjct: 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD 183

Query: 733 IDPVTK-AGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDL 791
           ++      G TPLH+A      +++  L++ GA+  A    G TPL  A  +   ++  L
Sbjct: 184 LNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARL 243

Query: 792 LLGAGAQPNATTN 804
           L   GA       
Sbjct: 244 LRAHGAPEPEDGG 256

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  168 bits (427), Expect = 5e-47
 Identities = 45/218 (20%), Positives = 78/218 (35%), Gaps = 12/218 (5%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
             G    V  L           +    ALH+A +      A +LL+   S+ +       
Sbjct: 54  ILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYL 113

Query: 58  TKLEVSLSNTKFEAT-------GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGV 110
           T+ +    +T             + E      D    +  ++ +G TPL++A       +
Sbjct: 114 TQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEM 173

Query: 111 VRYLLSKGGNQTLAT-EHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAA 169
           VR L   G +          TPLH+A +    +++ELL+  GA+  A+   G TPL  A 
Sbjct: 174 VRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSAL 233

Query: 170 RSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHE 207
              +  +  +L   GA       + L+P   +      
Sbjct: 234 LRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDS 271

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  128 bits (324), Expect = 4e-33
 Identities = 38/201 (18%), Positives = 63/201 (31%), Gaps = 24/201 (11%)

Query: 2   QQGHDRVVAVLLEN-----------------DTKGKVKLPALHIAAKKDDCKAAALLLEV 44
           +        VLL+                  D           + ++ +         E 
Sbjct: 87  RVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDED 146

Query: 45  SFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLN-GFTPLYMAA 103
                + E    +T L V++ +         E+ ++L D GA +N      G TPL++A 
Sbjct: 147 WRLQLEAENYDGHTPLHVAVIH------KDAEMVRLLRDAGADLNKPEPTCGRTPLHLAV 200

Query: 104 QENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLT 163
           +     V+  LL  G + T       TPL  A       +  LL + GA       D L+
Sbjct: 201 EAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLS 260

Query: 164 PLHCAARSGHDNVIDILIEKG 184
           P   +      +  D   E  
Sbjct: 261 PCSSSGSDSDSDNRDEGDEYD 281

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  115 bits (290), Expect = 1e-28
 Identities = 30/183 (16%), Positives = 49/183 (26%), Gaps = 30/183 (16%)

Query: 668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGA---TVSHQAKNGLTPLHLCAQEDKVNVAT 724
              ++ G T LHL+    H      L+   A    +  Q   G T LHL A   + +   
Sbjct: 3   GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVE 62

Query: 725 ITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTP-------- 776
                GA +    + G T LH+A           L++   +     +  Y          
Sbjct: 63  KLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD 122

Query: 777 ------LHQASQQGRVLIIDLLLGAGAQPNATTN-----LFC--------CATILVKNGA 817
                    +                 Q  A        L             +L   GA
Sbjct: 123 TSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA 182

Query: 818 EID 820
           +++
Sbjct: 183 DLN 185

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 41.0 bits (97), Expect = 9e-04
 Identities = 16/71 (22%), Positives = 20/71 (28%), Gaps = 16/71 (22%)

Query: 766 VNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP---NATTN-----LFCCAT------- 810
               T  G T LH A        +D LLG  A     +   +     L   A        
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61

Query: 811 -ILVKNGAEID 820
             L   GA + 
Sbjct: 62  EKLYAAGAGVL 72

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  262 bits (672), Expect = 2e-81
 Identities = 74/380 (19%), Positives = 129/380 (33%), Gaps = 90/380 (23%)

Query: 425 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGAS 484
           + +    L         +   +        +  +D      A   G+ +    LL+ GA 
Sbjct: 7   KQKRNEQLKRWIGSETDLEPPVVKRKKTKVKF-DDGAVFLAACSSGDTEEVLRLLERGAD 65

Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
           ++    DG TALH +  +   ++   L E+GA+I     +G+ PLH AA  G + IA+ L
Sbjct: 66  INYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYL 125

Query: 545 LQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQ 604
           + +                 GA + A   +G TPL +A +    ++ Q  + +      Q
Sbjct: 126 ISQ-----------------GAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNR------Q 162

Query: 605 GKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN 664
           G +             ++    L     +    AK+G T LH+AA K             
Sbjct: 163 GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK------------- 209

Query: 665 AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVAT 724
                               G+T++  LLI+    V+ +  +G                 
Sbjct: 210 --------------------GYTEVLKLLIQARYDVNIKDYDG----------------- 232

Query: 725 ITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQG 784
                           +TPLH A+H+G+    R LVEN  ++ A   +G T    A +  
Sbjct: 233 ----------------WTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI 276

Query: 785 RVLIIDLLLGAGAQPNATTN 804
              + +L        +    
Sbjct: 277 LGYLEELQKKQNLLHSEKRE 296

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  261 bits (670), Expect = 5e-81
 Identities = 68/321 (21%), Positives = 118/321 (36%), Gaps = 41/321 (12%)

Query: 229 TALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLL 288
               +    G     +  + ++     +  +       AC                  LL
Sbjct: 10  RNEQLKRWIGSETDLEPPVVKRKKTKVKF-DDGAVFLAACSSG--------DTEEVLRLL 60

Query: 289 DRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMN 348
           +R AD N   ++G T LH AC  +   +V+ L++ GA+I      G  PLH A+  G ++
Sbjct: 61  ERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLD 120

Query: 349 IAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVAS 408
           IA +L+  GA        G+TPL +A      ++++  +                     
Sbjct: 121 IAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQG----------------- 163

Query: 409 RLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR 468
                          V  E       R    D  + L     +    A+   T LHVA+ 
Sbjct: 164 ---------------VDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAA 208

Query: 469 LGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTP 528
            G  ++  LL+Q    V+    DG+T LH +A  G++E   IL E+   + A  K G T 
Sbjct: 209 KGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTA 268

Query: 529 LHLAAKYGRMKIAQMLLQKDA 549
             +A +     + ++  +++ 
Sbjct: 269 FDVADEDILGYLEELQKKQNL 289

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  260 bits (668), Expect = 8e-81
 Identities = 61/341 (17%), Positives = 111/341 (32%), Gaps = 50/341 (14%)

Query: 366 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVR 425
           + +    L         +   +        +                             
Sbjct: 7   KQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFD--------------------------- 39

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
                  A  +  T+ V  LL  GA ++    +  T LH A    N D+   L+++GA++
Sbjct: 40  DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANI 99

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           + P  +G+  LH +A  G  ++A  L   GA + A   +G TPL +A +    ++ Q  +
Sbjct: 100 NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEV 159

Query: 546 QKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG 605
            +                                    +       Q L           
Sbjct: 160 NRQG-----------------------VDIEAARKEEERIMLRDARQWLNSGHINDVRHA 196

Query: 606 KNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
           K+G T LHVA+   +  V  LL+      +    +G+TPLH AA   + +    L+E   
Sbjct: 197 KSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLC 256

Query: 666 KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN 706
              A +K G T   ++ ++    +  L  +     S + + 
Sbjct: 257 DMEAVNKVGQTAFDVADEDILGYLEELQKKQNLLHSEKREK 297

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  257 bits (660), Expect = 1e-79
 Identities = 66/286 (23%), Positives = 106/286 (37%), Gaps = 15/286 (5%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G E   +  V       V+  +       A        V  LL +G +   A    +T L
Sbjct: 19  GSETDLEPPVVKRKKTKVKF-DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTAL 77

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H AC    V MV+ L+  GANI     +G  PLH AA  G+ ++ + LI +GA + +   
Sbjct: 78  HQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNS 137

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
            G  PL +A +   E   +  +          VD   A             + L     +
Sbjct: 138 EGDTPLDIAEEEAMEELLQNEVNRQG------VDIEAARKEEERIMLRDARQWLNSGHIN 191

Query: 253 PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN 312
               A +G T LH+A        +   +  V K L+  + D N +  +G+TPLH A    
Sbjct: 192 DVRHAKSGGTALHVA--------AAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWG 243

Query: 313 RYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGA 358
           + +   +L++    + A  + G T   VA       +     +   
Sbjct: 244 KEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQNL 289

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  255 bits (655), Expect = 6e-79
 Identities = 58/315 (18%), Positives = 108/315 (34%), Gaps = 16/315 (5%)

Query: 88  INVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELL 147
           + +          +      +  +   + K     +  +        AC  G    V  L
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDG-AVFLAACSSGDTEEVLRL 59

Query: 148 ISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHE 207
           + +GA+I     DGLT LH A    + +++  L+E GA +      G  PLH A+   + 
Sbjct: 60  LERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYL 119

Query: 208 AATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIA 267
                LI  GA V  +  +  T L +A       + +  ++R+        +        
Sbjct: 120 DIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGV------DIEAARKEE 173

Query: 268 CKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASI 327
                            + L     +    A +G T LH+A  K   +V++LL++    +
Sbjct: 174 --------ERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDV 225

Query: 328 AATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILL 387
                 G TPLH A+  G       L++     +     G+T   +A       +  +  
Sbjct: 226 NIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQK 285

Query: 388 RNGASVDARAREDQT 402
           +       + RE ++
Sbjct: 286 KQNLLHSEK-REKKS 299

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  240 bits (615), Expect = 4e-73
 Identities = 56/282 (19%), Positives = 100/282 (35%), Gaps = 24/282 (8%)

Query: 523 KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLA 582
            K      L    G     +  + K                           G      A
Sbjct: 6   AKQKRNEQLKRWIGSETDLEPPVVK-----------------RKKTKVKFDDG-AVFLAA 47

Query: 583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGY 642
              G  +    LL++ A ++    +G+T LH A   D+ ++   L++ GA+ +     G+
Sbjct: 48  CSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGW 107

Query: 643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSH 702
            PLH AA    +DIA  L+   A   A +  G TPL ++ +E   ++    +      + 
Sbjct: 108 IPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEV------NR 161

Query: 703 QAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN 762
           Q  +         +    +                K+G T LH+A+  G   +++ L++ 
Sbjct: 162 QGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQA 221

Query: 763 GANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
             +VN     G+TPLH A+  G+     +L+       A   
Sbjct: 222 RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNK 263

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  210 bits (536), Expect = 7e-62
 Identities = 67/335 (20%), Positives = 103/335 (30%), Gaps = 91/335 (27%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
             G    V  LLE     +      L ALH A                            
Sbjct: 49  SSGDTEEVLRLLERGADINYANVDGLTALHQACID------------------------- 83

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                             ++ K LV+NGA IN     G+ PL+ AA   +          
Sbjct: 84  ---------------DNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY---------- 118

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI 177
                                  + + E LIS+GA++ A   +G TPL  A     + ++
Sbjct: 119 -----------------------LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELL 155

Query: 178 DILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHC 237
              + +         +  A      +     A + L               TALHVA+  
Sbjct: 156 QNEVNRQGV------DIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK 209

Query: 238 GHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNAR 297
           G+  V K L+  + D N +  +G+TPLH A        +H       + L++   D  A 
Sbjct: 210 GYTEVLKLLIQARYDVNIKDYDGWTPLHAA--------AHWGKEEACRILVENLCDMEAV 261

Query: 298 ALNGFTPLHIACKKNRYKVVELLLKYGASIAATTE 332
              G T   +A +     + EL  K     +   E
Sbjct: 262 NKVGQTAFDVADEDILGYLEELQKKQNLLHSEKRE 296

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  136 bits (346), Expect = 6e-36
 Identities = 31/200 (15%), Positives = 66/200 (33%), Gaps = 25/200 (12%)

Query: 2   QQGHDRVVAVLLEN-------DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVS 54
             G+  +   L+         +++G      L IA ++   +     +     +      
Sbjct: 115 SCGYLDIAEYLISQGAHVGAVNSEGDT---PLDIAEEEAMEELLQNEVNRQGVDI----- 166

Query: 55  LSNTKLEVSLSNTKFEAT-GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRY 113
                        K E      +  + L          + +G T L++AA + +  V++ 
Sbjct: 167 --EAAR-------KEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKL 217

Query: 114 LLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGH 173
           L+    +  +      TPLH A  WGK     +L+    ++EA  + G T    A     
Sbjct: 218 LIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDIL 277

Query: 174 DNVIDILIEKGAALYSKTKN 193
             + ++  ++      K + 
Sbjct: 278 GYLEELQKKQNLLHSEKREK 297

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  124 bits (313), Expect = 2e-31
 Identities = 33/137 (24%), Positives = 50/137 (36%), Gaps = 1/137 (0%)

Query: 668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM 727
                       L    G        +        +  +G                   +
Sbjct: 2   KMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDG-AVFLAACSSGDTEEVLRLL 60

Query: 728 FNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVL 787
             GA+I+     G T LH A     ++MV++LVENGAN+N   N G+ PLH A+  G + 
Sbjct: 61  ERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLD 120

Query: 788 IIDLLLGAGAQPNATTN 804
           I + L+  GA   A  +
Sbjct: 121 IAEYLISQGAHVGAVNS 137

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  261 bits (669), Expect = 4e-81
 Identities = 42/274 (15%), Positives = 93/274 (33%), Gaps = 21/274 (7%)

Query: 71  ATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNIT 130
            T + +  K  + +        ++G +  Y A  +N+  +V  LL+ G  +      N  
Sbjct: 8   NTWKSKQLKSFL-SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKN--LLENEF 64

Query: 131 PLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSK 190
           PLH A       +V++L+  G +       G T L+ A  SG+   + + ++K   L   
Sbjct: 65  PLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFY 124

Query: 191 TKNGLA-PLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR 249
            K G     + A   +  +     +             L+ +H+    GHV +   LLD 
Sbjct: 125 GKTGWKTSFYHAVMLNDVSIVSYFLSEIP-STFDLAILLSCIHITIKNGHVDMMILLLDY 183

Query: 250 KADPNARALNGFTP-LHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIA 308
               N      F P + +A             + + + L     +         +     
Sbjct: 184 MTSTNTNNSLLFIPDIKLAIDN--------KDIEMLQALFKYDINIY-------SANLEN 228

Query: 309 CKKNRYKVVELLLKYGASIAATTESGLTPLHVAS 342
              +  ++ +++++      + + +    +   +
Sbjct: 229 VLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKNN 262

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  242 bits (620), Expect = 5e-74
 Identities = 46/336 (13%), Positives = 98/336 (29%), Gaps = 65/336 (19%)

Query: 460 QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASIT 519
                + +           L            G++A + +  +    +   L  +GA   
Sbjct: 2   MDLSRINT--WKSKQLKSFLS-SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKN 58

Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPL 579
               +   PLH AA     KI ++LL                   G   +    KG T L
Sbjct: 59  L--LENEFPLHQAATLEDTKIVKILLFS-----------------GLDDSQFDDKGNTAL 99

Query: 580 HLAAKYGRMKIAQMLLQKDAPVDSQGKNGV-TPLHVASHYDHQNVALLLLDRGASPHAVA 638
           + A   G M+  ++ ++K+  +   GK G  T  + A   +  ++    L    S   + 
Sbjct: 100 YYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL- 158

Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTP-LHLSAQEGHTDMSSLLIEHG 697
               + +HI  K   +D+   LL+Y    N  +   F P + L+      +M   L ++ 
Sbjct: 159 AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYD 218

Query: 698 ATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVR 757
             +                                         +            + +
Sbjct: 219 INIY----------------------------------------SANLENVLLDDAEIAK 238

Query: 758 YLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
            ++E      + +      + + ++   ++  +  L
Sbjct: 239 MIIEKHVEYKSDSYTKDLDIVKNNKLDEIISKNKEL 274

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  230 bits (589), Expect = 1e-69
 Identities = 47/338 (13%), Positives = 95/338 (28%), Gaps = 64/338 (18%)

Query: 260 GFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVEL 319
           G     I   K++                    D     ++G +  + A   N  ++V  
Sbjct: 1   GMDLSRINTWKSK-----------QLKSFLSSKDTFKADVHGHSASYYAIADNNVRLVCT 49

Query: 320 LLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQ 379
           LL  GA           PLH A+ +    I   LL +G        +G T L+ A  +  
Sbjct: 50  LLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGN 107

Query: 380 TDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQT 439
              V++ ++    +    +                            +T  + A   N  
Sbjct: 108 MQTVKLFVKKNWRLMFYGKTG-------------------------WKTSFYHAVMLNDV 142

Query: 440 DIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYT-ALHI 498
            IV   L              + +H+  + G+ D+  LLL +  S +      +   + +
Sbjct: 143 SIVSYFLSEIP-STFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKL 201

Query: 499 SAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVA 558
           +      E+   L +   +I        +           +IA+M+++K           
Sbjct: 202 AIDNKDIEMLQALFKYDINIY-------SANLENVLLDDAEIAKMIIEK----------- 243

Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 596
                      + +      +    K   +      L+
Sbjct: 244 ------HVEYKSDSYTKDLDIVKNNKLDEIISKNKELR 275

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  227 bits (581), Expect = 2e-68
 Identities = 45/334 (13%), Positives = 94/334 (28%), Gaps = 58/334 (17%)

Query: 367 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRG 426
           G           ++  ++  L +                                    G
Sbjct: 1   GMDLSR--INTWKSKQLKSFL-SSKDTFKADVH--------------------------G 31

Query: 427 ETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVD 486
            +  + A   N   +V  LL  GA  +    E++ PLH A+ L +  I  +LL  G    
Sbjct: 32  HSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDS 89

Query: 487 APTKDGYTALHISAKEGQDEVASILTESGASITATTKKGF-TPLHLAAKYGRMKIAQMLL 545
                G TAL+ +   G  +   +  +    +    K G+ T  + A     + I    L
Sbjct: 90  QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFL 149

Query: 546 QKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG 605
            +                             + +H+  K G + +  +LL      ++  
Sbjct: 150 SEIPST------------------FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNN 191

Query: 606 KNGVTP-LHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN 664
                P + +A       +   L            N Y+        +  +IA  ++E +
Sbjct: 192 SLLFIPDIKLAIDNKDIEMLQALFKYDI-------NIYSANLENVLLDDAEIAKMIIEKH 244

Query: 665 AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
            +  ++S      +  + +       +  +    
Sbjct: 245 VEYKSDSYTKDLDIVKNNKLDEIISKNKELRLMY 278

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  223 bits (571), Expect = 6e-67
 Identities = 38/345 (11%), Positives = 92/345 (26%), Gaps = 80/345 (23%)

Query: 161 GLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGV 220
           G+        +     +   +      +    +G +  + A   ++      L+  GA  
Sbjct: 1   GMDLSR--INTWKSKQLKSFL-SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK 57

Query: 221 DEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNH 280
           +   ++    LH A+     ++ K LL    D +     G T L+ A            +
Sbjct: 58  NL--LENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDS--------GN 107

Query: 281 VWVAKTLLDRKADPNARALNGF-TPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLH 339
           +   K  + +          G+ T  + A   N   +V   L    S             
Sbjct: 108 MQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAI------- 160

Query: 340 VASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARARE 399
                                        + +H+  +    D++ +LL    S +     
Sbjct: 161 ---------------------------LLSCIHITIKNGHVDMMILLLDYMTSTNTNNSL 193

Query: 400 DQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARARED 459
              P                          + LA      ++++ L +   ++       
Sbjct: 194 LFIPD-------------------------IKLAIDNKDIEMLQALFKYDINIY------ 222

Query: 460 QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQ 504
            +       L + +IA ++++      + +      +  + K  +
Sbjct: 223 -SANLENVLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKNNKLDE 266

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  221 bits (566), Expect = 2e-66
 Identities = 44/314 (14%), Positives = 91/314 (28%), Gaps = 63/314 (20%)

Query: 492 GYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPV 551
           G     I+  +   ++ S L  S          G +  + A     +++   LL   A  
Sbjct: 1   GMDLSRINTWK-SKQLKSFL--SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK 57

Query: 552 DSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTP 611
           +                     +   PLH AA     KI ++LL            G T 
Sbjct: 58  N-------------------LLENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTA 98

Query: 612 LHVASHYDHQNVALLLLDRGASPHAVAKNGY-TPLHIAAKKNQMDIATTLLEYNAKPNAE 670
           L+ A    +     L + +        K G+ T  + A   N + I +  L        +
Sbjct: 99  LYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP-STFD 157

Query: 671 SKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNG 730
                + +H++ + GH DM  LL+++  + +        P                    
Sbjct: 158 LAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPD------------------- 198

Query: 731 AEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIID 790
                        + +A     + M++ L +   N+        +   +        I  
Sbjct: 199 -------------IKLAIDNKDIEMLQALFKYDINIY-------SANLENVLLDDAEIAK 238

Query: 791 LLLGAGAQPNATTN 804
           +++    +  + + 
Sbjct: 239 MIIEKHVEYKSDSY 252

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  209 bits (535), Expect = 7e-62
 Identities = 38/254 (14%), Positives = 81/254 (31%), Gaps = 14/254 (5%)

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
           G     +     + K  +  L           +G +  + A   ++  +   LL+ GA  
Sbjct: 1   GMDLSRIN--TWKSKQLKSFLSS-KDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK 57

Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
           +        PLH AA      I   LL      +     G T L+ +   G+     L +
Sbjct: 58  NL--LENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFV 115

Query: 695 EHGATVSHQAKNGL-TPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQL 753
           +    +    K G  T  +     + V++ +  +              + +HI    G +
Sbjct: 116 KKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF-DLAILLSCIHITIKNGHV 174

Query: 754 NMVRYLVENGANVNATTNLGYTP-LHQASQQGRVLIIDLLLGAGAQPNATTNLFCC---- 808
           +M+  L++   + N   +L + P +  A     + ++  L        +           
Sbjct: 175 DMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANLENVLLDDA 234

Query: 809 --ATILVKNGAEID 820
             A ++++   E  
Sbjct: 235 EIAKMIIEKHVEYK 248

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  196 bits (501), Expect = 4e-57
 Identities = 35/278 (12%), Positives = 90/278 (32%), Gaps = 22/278 (7%)

Query: 4   GHDRVVAVLLEN---DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKL 60
              + +   L +            A + A   ++ +    LL    +     +  +   L
Sbjct: 10  WKSKQLKSFLSSKDTFKADVHGHSASYYAIADNNVRLVCTLLN---AGALKNLLENEFPL 66

Query: 61  EVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGN 120
             + +          ++ KIL+ +G   +     G T LY A    +   V+  + K   
Sbjct: 67  HQAATL------EDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR 120

Query: 121 QTLATEHNI-TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDI 179
                +    T  + A     V++V   +S+  +        L+ +H   ++GH +++ +
Sbjct: 121 LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF-DLAILLSCIHITIKNGHVDMMIL 179

Query: 180 LIEKGAALYSKTKNGLAP-LHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCG 238
           L++   +  +       P + +A         + L  +   +        +A        
Sbjct: 180 LLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIY-------SANLENVLLD 232

Query: 239 HVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSS 276
              +AK ++++  +  + +      +    K +   S 
Sbjct: 233 DAEIAKMIIEKHVEYKSDSYTKDLDIVKNNKLDEIISK 270

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  156 bits (398), Expect = 6e-43
 Identities = 33/257 (12%), Positives = 65/257 (25%), Gaps = 54/257 (21%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
                ++V +LL +             AL+ A                            
Sbjct: 71  TLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDS------------------------- 105

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGF-TPLYMAAQENHDGVVRYLLS 116
                          G  +  K+ V     +      G+ T  Y A   N   +V Y LS
Sbjct: 106 ---------------GNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLS 150

Query: 117 KGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTP-LHCAARSGHDN 175
           +  + T      ++ +H+  K G V M+ LL+    +          P +  A  +    
Sbjct: 151 EIPS-TFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIE 209

Query: 176 VIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVAS 235
           ++  L +          N  +        D     +++I         +      +   +
Sbjct: 210 MLQALFKYDI-------NIYSANLENVLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKNN 262

Query: 236 HCGHVRVAKTLLDRKAD 252
               +      L     
Sbjct: 263 KLDEIISKNKELRLMYV 279

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 56.8 bits (138), Expect = 8e-09
 Identities = 12/163 (7%), Positives = 35/163 (21%), Gaps = 56/163 (34%)

Query: 2   QQGHDRVVAVLLEN-------DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVS 54
           + GH  ++ +LL+        ++   +  P + +A                         
Sbjct: 170 KNGHVDMMILLLDYMTSTNTNNSLLFI--PDIKLAIDN---------------------- 205

Query: 55  LSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYL 114
                                E+ + L      I        +        +   + + +
Sbjct: 206 ------------------KDIEMLQALFKYDINIY-------SANLENVLLDDAEIAKMI 240

Query: 115 LSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAK 157
           + K       +      +    K  ++      +        K
Sbjct: 241 IEKHVEYKSDSYTKDLDIVKNNKLDEIISKNKELRLMYVNCVK 283

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  260 bits (667), Expect = 9e-81
 Identities = 62/333 (18%), Positives = 117/333 (35%), Gaps = 58/333 (17%)

Query: 373 LAARANQTDIVRILLRNGASVDAR-----AREDQTPLHVASRLRRFSSASQSALTRVRGE 427
           + +  +       L+  G+ + +        +   P            ++      V   
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDW 60

Query: 428 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDA 487
           +P+H AA       +R L+  G +V+    +  +PLH A   G+     +LL+HGA V+ 
Sbjct: 61  SPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG 120

Query: 488 PTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 547
            T D +T L  +   G  +  ++L + GAS+                             
Sbjct: 121 VTADWHTPLFNACVSGSWDCVNLLLQHGASVQP--------------------------- 153

Query: 548 DAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKN 607
                                        +P+H AA+ G ++    L+     +D +  +
Sbjct: 154 ------------------------ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISH 189

Query: 608 GVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKP 667
             TPL++A     +     LL+ GA  +   K   +PLH   +    ++A  L+++ A  
Sbjct: 190 LGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADT 248

Query: 668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATV 700
            A++  G  P+ L   E        L   GA++
Sbjct: 249 QAKNAEGKRPVELVPPESPLAQ-LFLEREGASL 280

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  257 bits (660), Expect = 9e-80
 Identities = 69/320 (21%), Positives = 120/320 (37%), Gaps = 50/320 (15%)

Query: 233 VASHCGHVRVAKTLLDRKADPNAR-----ALNGFTPLHIACKKNRYKSSHCNHVWVAKTL 287
           + S   H   +  L+ R +   +       ++G  P            S+          
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPL-------- 52

Query: 288 LDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCM 347
                     A++ ++P+H A        +  L+  G ++   T   ++PLH A   G +
Sbjct: 53  -------MGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHL 105

Query: 348 NIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVA 407
           +    LL+ GA  +  T    TPL  A  +   D V +LL++GASV   +          
Sbjct: 106 SCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES---------- 155

Query: 408 SRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVAS 467
                               +P+H AAR    + V  L+  G ++D +     TPL++A 
Sbjct: 156 -----------------DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLAC 198

Query: 468 RLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFT 527
                     LL+ GA V+   K   + LH   +   +E+A +L + GA   A   +G  
Sbjct: 199 ENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKR 257

Query: 528 PLHLAAKYGRMKIAQMLLQK 547
           P+ L        +AQ+ L++
Sbjct: 258 PVELVPPES--PLAQLFLER 275

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  257 bits (658), Expect = 1e-79
 Identities = 65/290 (22%), Positives = 117/290 (40%), Gaps = 42/290 (14%)

Query: 73  GQEEVAKILVDNGATIN-------------------------------VQSLNGFTPLYM 101
                +  LV  G+ +                                  +++ ++P++ 
Sbjct: 6   HHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHE 65

Query: 102 AAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDG 161
           AA   H   +R L+S+G    + T  +++PLH AC  G ++ V++L+  GA +   T D 
Sbjct: 66  AAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADW 125

Query: 162 LTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVD 221
            TPL  A  SG  + +++L++ GA++     +  +P+H A++  H      LI +G  +D
Sbjct: 126 HTPLFNACVSGSWDCVNLLLQHGASV-QPESDLASPIHEAARRGHVECVNSLIAYGGNID 184

Query: 222 EITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHV 281
                  T L++A         K LL+  AD N       +PLH   +            
Sbjct: 185 HKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRT--------ASE 235

Query: 282 WVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATT 331
            +A  L+D  AD  A+   G  P+ +   ++       L + GAS+    
Sbjct: 236 ELACLLMDFGADTQAKNAEGKRPVELVPPES-PLAQLFLEREGASLPKPK 284

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  255 bits (655), Expect = 5e-79
 Identities = 67/339 (19%), Positives = 119/339 (35%), Gaps = 55/339 (16%)

Query: 465 VASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKK 524
           + S   +   +S L+  G+ + +   DG                                
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMAS--MDGKQ--------------------------GGMD 32

Query: 525 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK 584
           G  P       G   ++  L+                              ++P+H AA 
Sbjct: 33  GSKPAGPRDFPGIRLLSNPLMGDA------------------------VSDWSPMHEAAI 68

Query: 585 YGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTP 644
           +G     + L+ +   V+    + V+PLH A    H +   +LL  GA  + V  + +TP
Sbjct: 69  HGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTP 128

Query: 645 LHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA 704
           L  A      D    LL++ A    ES    +P+H +A+ GH +  + LI +G  + H+ 
Sbjct: 129 LFNACVSGSWDCVNLLLQHGASVQPESD-LASPIHEAARRGHVECVNSLIAYGGNIDHKI 187

Query: 705 KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA 764
            +  TPL+L  +  +       + +GA+++   K   +PLH         +   L++ GA
Sbjct: 188 SHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGA 246

Query: 765 NVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
           +  A    G  P+     +   L    L   GA      
Sbjct: 247 DTQAKNAEGKRPVELVPPESP-LAQLFLEREGASLPKPK 284

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  200 bits (510), Expect = 2e-58
 Identities = 51/261 (19%), Positives = 93/261 (35%), Gaps = 25/261 (9%)

Query: 581 LAAKYGRMKIAQMLLQKDAPVDSQGKN-----GVTPLHVASHYDHQNVALLLLDRGASPH 635
           + + +     +  L+ + + + S         G  P               LL       
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGI-----RLLSNPLMGD 55

Query: 636 AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIE 695
           A   + ++P+H AA          L+      N  +    +PLH +   GH     +L++
Sbjct: 56  A--VSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLK 113

Query: 696 HGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNM 755
           HGA V+    +  TPL         +   + + +GA + P      +P+H A+  G +  
Sbjct: 114 HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVEC 172

Query: 756 VRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN----LFC---- 807
           V  L+  G N++   +   TPL+ A +  +   +  LL +GA  N        L      
Sbjct: 173 VNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRT 232

Query: 808 ----CATILVKNGAEIDPVTK 824
                A +L+  GA+      
Sbjct: 233 ASEELACLLMDFGADTQAKNA 253

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  183 bits (466), Expect = 3e-52
 Identities = 51/258 (19%), Positives = 82/258 (31%), Gaps = 47/258 (18%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
             GH   +  L+      +      +  LH A                            
Sbjct: 68  IHGHQLSLRNLISQGWAVNIITADHVSPLHEACLG------------------------- 102

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                          G     KIL+ +GA +N  + +  TPL+ A        V  LL  
Sbjct: 103 ---------------GHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQH 147

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI 177
           G +         +P+H A + G V  V  LI+ G NI+ K     TPL+ A  +     +
Sbjct: 148 GAS-VQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACV 206

Query: 178 DILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHC 237
             L+E GA + ++ K   +PLH   +   E    +L+  GA       +    + +    
Sbjct: 207 KKLLESGADV-NQGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPE 265

Query: 238 GHVRVAKTLLDRKADPNA 255
             +     L    A    
Sbjct: 266 SPL-AQLFLEREGASLPK 282

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 87.9 bits (219), Expect = 3e-19
 Identities = 25/161 (15%), Positives = 49/161 (30%), Gaps = 47/161 (29%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
           ++GH   V  L+      D K       L++A +                          
Sbjct: 166 RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACEN------------------------- 200

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                           Q    K L+++GA +N Q     +PL+   +   + +   L+  
Sbjct: 201 ---------------QQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDF 244

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANI-EAK 157
           G +          P+ +      +A    L  +GA++ + K
Sbjct: 245 GADTQAKNAEGKRPVELVPPESPLA-QLFLEREGASLPKPK 284

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  252 bits (647), Expect = 1e-78
 Identities = 71/277 (25%), Positives = 114/277 (41%), Gaps = 48/277 (17%)

Query: 124 ATEHNITPLHVACKWGKVAMVELLIS----KGANIEAKTRDGLTPLHCAARSGHDNVIDI 179
           A E   TPLH+A   G +  V  L++     G  ++       TPLH A  +   +V+ +
Sbjct: 5   ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRL 64

Query: 180 LIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAG----VDEITVDYLTALHVAS 235
           L+  GA+  +  ++G    H+A +       R L+   A     ++    D LTALHVA 
Sbjct: 65  LVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAV 124

Query: 236 HCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPN 295
           +       + LL+R AD +A  +                                     
Sbjct: 125 NTECQETVQLLLERGADIDAVDIK------------------------------------ 148

Query: 296 ARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQ 355
               +G +PL  A + N   +V+LLL++GA++ A   SG + LH AS  G + +   L++
Sbjct: 149 ----SGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVR 204

Query: 356 AGAAPDTATVRGETPLHLAARANQTDIVRILLRNGAS 392
           +GA         +TPL +A      DI+R      AS
Sbjct: 205 SGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  236 bits (604), Expect = 2e-72
 Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 9/239 (3%)

Query: 568 ITATTKKGFTPLHLAAKYGRMKIAQMLL----QKDAPVDSQGKNGVTPLHVASHYDHQNV 623
            T   + G TPLH+A   G +     L+    Q    +D       TPLH+A      +V
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV 61

Query: 624 ALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKP----NAESKAGFTPLH 679
             LL+  GASP A+ ++G T  H+A +         LL+  A       A +  G T LH
Sbjct: 62  VRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALH 121

Query: 680 LSAQEGHTDMSSLLIEHGATVSHQ-AKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTK 738
           ++      +   LL+E GA +     K+G +PL    + + +++  + + +GA ++    
Sbjct: 122 VAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMY 181

Query: 739 AGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
           +G + LH AS  G L +VR LV +GA+ +       TPL  A  +  + I+       A
Sbjct: 182 SGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  233 bits (596), Expect = 3e-71
 Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 18/244 (7%)

Query: 460 QTPLHVASRLGNGDIA----SLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESG 515
            TPLH+A   GN        +L  Q G  +D       T LH++       V  +L  +G
Sbjct: 10  DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG 69

Query: 516 ASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKG 575
           AS  A  + G T  HLA ++      + LL   AP                 + A    G
Sbjct: 70  ASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAP-------------GTLDLEARNYDG 116

Query: 576 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQ-GKNGVTPLHVASHYDHQNVALLLLDRGASP 634
            T LH+A      +  Q+LL++ A +D+   K+G +PL  A   +  ++  LLL  GA+ 
Sbjct: 117 LTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV 176

Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
           +A   +G + LH A+ +  + +  TL+   A  + ++    TPL ++      D+     
Sbjct: 177 NAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKA 236

Query: 695 EHGA 698
              A
Sbjct: 237 TRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  230 bits (589), Expect = 4e-70
 Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 18/253 (7%)

Query: 518 ITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFT 577
            T   + G TPLH+A   G +     L+             ++  + G  +        T
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLV-------------NLFQQGGRELDIYNNLRQT 48

Query: 578 PLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPH-- 635
           PLHLA       + ++L+   A   +  ++G T  H+A  +        LLD  A     
Sbjct: 49  PLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLD 108

Query: 636 --AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNA-ESKAGFTPLHLSAQEGHTDMSSL 692
             A   +G T LH+A      +    LLE  A  +A + K+G +PL  + +     M  L
Sbjct: 109 LEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQL 168

Query: 693 LIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQ 752
           L++HGA V+ Q  +G + LH  +    + +    + +GA+         TPL +A     
Sbjct: 169 LLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRV 228

Query: 753 LNMVRYLVENGAN 765
           ++++R      A+
Sbjct: 229 IDILRGKATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  228 bits (584), Expect = 2e-69
 Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 24/248 (9%)

Query: 426 GETPLHLAARANQTDIVRILL----RNGASVDARAREDQTPLHVASRLGNGDIASLLLQH 481
           G+TPLH+A        V  L+    + G  +D      QTPLH+A       +  LL+  
Sbjct: 9   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 68

Query: 482 GASVDAPTKDGYTALHISAKEGQDEVASILTESGAS----ITATTKKGFTPLHLAAKYGR 537
           GAS  A  + G TA H++ +         L +S A     + A    G T LH+A     
Sbjct: 69  GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 128

Query: 538 MKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 597
            +  Q+LL++ A +D+                   K G +PL  A +   + + Q+LLQ 
Sbjct: 129 QETVQLLLERGADIDAV----------------DIKSGRSPLIHAVENNSLSMVQLLLQH 172

Query: 598 DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIA 657
            A V++Q  +G + LH AS      +   L+  GA       +  TPL +A  +  +DI 
Sbjct: 173 GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 232

Query: 658 TTLLEYNA 665
                  A
Sbjct: 233 RGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  223 bits (572), Expect = 9e-68
 Identities = 64/272 (23%), Positives = 100/272 (36%), Gaps = 41/272 (15%)

Query: 254 NARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRK----ADPNARALNGFTPLHIAC 309
                +G TPLHIA  +         ++     L++       + +       TPLH+A 
Sbjct: 3   TRADEDGDTPLHIAVVQG--------NLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAV 54

Query: 310 KKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAP----DTATV 365
                 VV LL+  GAS  A    G T  H+A           LL + A      +    
Sbjct: 55  ITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY 114

Query: 366 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVR 425
            G T LH+A      + V++LL  GA +DA   +                          
Sbjct: 115 DGLTALHVAVNTECQETVQLLLERGADIDAVDIKS------------------------- 149

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
           G +PL  A   N   +V++LL++GA+V+A+     + LH AS  G   +   L++ GA  
Sbjct: 150 GRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADS 209

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGAS 517
                   T L ++      ++        AS
Sbjct: 210 SLKNCHNDTPLMVARSRRVIDILRGKATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  211 bits (541), Expect = 3e-63
 Identities = 61/291 (20%), Positives = 97/291 (33%), Gaps = 75/291 (25%)

Query: 73  GQEEVAKILVD----NGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHN 128
           G       LV+     G  +++ +    TPL++A       V                  
Sbjct: 20  GNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV------------------ 61

Query: 129 ITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALY 188
                          V LL++ GA+  A  R G T  H A        +  L++  A   
Sbjct: 62  ---------------VRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAP-- 104

Query: 189 SKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLD 248
                                          ++    D LTALHVA +       + LL+
Sbjct: 105 ---------------------------GTLDLEARNYDGLTALHVAVNTECQETVQLLLE 137

Query: 249 RKADPNARALN-GFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHI 307
           R AD +A  +  G +PL  A +         N + + + LL   A+ NA+  +G + LH 
Sbjct: 138 RGADIDAVDIKSGRSPLIHAVEN--------NSLSMVQLLLQHGANVNAQMYSGSSALHS 189

Query: 308 ACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGA 358
           A  +    +V  L++ GA  +       TPL VA     ++I        A
Sbjct: 190 ASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  140 bits (355), Expect = 1e-37
 Identities = 38/197 (19%), Positives = 65/197 (32%), Gaps = 24/197 (12%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
                 VV +L+          +    A H+A +         LL     +         
Sbjct: 55  ITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALL----DSAAPGTLDLE 110

Query: 58  TKLEVSLSNTKFEAT--------GQEEVAKILVDNGATINVQSLN-GFTPLYMAAQENHD 108
            +            T          +E  ++L++ GA I+   +  G +PL  A + N  
Sbjct: 111 AR-------NYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSL 163

Query: 109 GVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCA 168
            +V+ LL  G N         + LH A   G + +V  L+  GA+   K     TPL  A
Sbjct: 164 SMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVA 223

Query: 169 ARSGHDNVIDILIEKGA 185
                 +++     + A
Sbjct: 224 RSRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  102 bits (258), Expect = 8e-25
 Identities = 36/170 (21%), Positives = 55/170 (32%), Gaps = 46/170 (27%)

Query: 668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM 727
               + G TPLH++  +G+      L+                              +  
Sbjct: 3   TRADEDGDTPLHIAVVQGNLPAVHRLVN-----------------------------LFQ 33

Query: 728 FNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVL 787
             G E+D       TPLH+A      ++VR LV  GA+  A    G T  H A +     
Sbjct: 34  QGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPT 93

Query: 788 IIDLLLGAGAQP----NATTN-----LFC--------CATILVKNGAEID 820
            +  LL + A       A        L             +L++ GA+ID
Sbjct: 94  CLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADID 143

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 97.9 bits (245), Expect = 5e-23
 Identities = 33/168 (19%), Positives = 66/168 (39%), Gaps = 30/168 (17%)

Query: 2   QQGHDRVVAVLLEN--------DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEV 53
           +      +  LL++        + +    L ALH+A   +  +   LLLE          
Sbjct: 88  EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER--------- 138

Query: 54  SLSNTKLEVSLSNTKFEAT--------GQEEVAKILVDNGATINVQSLNGFTPLYMAAQE 105
                  ++   + K   +            + ++L+ +GA +N Q  +G + L+ A+  
Sbjct: 139 -----GADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGR 193

Query: 106 NHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN 153
               +VR L+  G + +L   HN TPL VA     + ++    ++ A+
Sbjct: 194 GLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPAS 241

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  253 bits (648), Expect = 5e-78
 Identities = 82/278 (29%), Positives = 113/278 (40%), Gaps = 17/278 (6%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHN-ITPLHVACKWGKVAMVELLISKGA 152
                L  A Q     +V+ LL  G N     E    TPLH A +  +  +VELL+  GA
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 153 NIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRV 212
           +   + ++G TP   AA +G   ++ + + KGA +      G      A+      A + 
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123

Query: 213 LIYHGAGVDEITVDYL----------TALHVASHCGHVRVAKTLLDRK-ADPNARALNGF 261
           L   GA V+                 TAL  A+  GHV V K LLD   AD NA    G 
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 183

Query: 262 TPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLL 321
             L  A   +       +   +   LLD  AD N R   G TPL +A +K    +V+ LL
Sbjct: 184 NALIHALLSS----DDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL 239

Query: 322 -KYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGA 358
            +    I  T   G T L +A  +    IA  L + GA
Sbjct: 240 EQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA 277

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  248 bits (636), Expect = 3e-76
 Identities = 82/322 (25%), Positives = 127/322 (39%), Gaps = 56/322 (17%)

Query: 363 ATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALT 422
           A V     L  A +    D+V+ LL  GA+V+ +  E                       
Sbjct: 1   AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEG---------------------- 38

Query: 423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
              G TPLH A + ++ DIV +LLR+GA    R +   TP  +A+  G+  +  L L  G
Sbjct: 39  ---GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKG 95

Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGASI----------TATTKKGFTPLHLA 532
           A V+     G+TA   +A  G+ +    L + GA++              K G T L  A
Sbjct: 96  ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 155

Query: 533 AKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMK--- 589
           A+ G +++ ++L                L E GA + A    G   L  A          
Sbjct: 156 AEKGHVEVLKIL----------------LDEMGADVNACDNMGRNALIHALLSSDDSDVE 199

Query: 590 -IAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDR-GASPHAVAKNGYTPLHI 647
            I  +LL   A V+ +G+ G TPL +A    H  +   LL++     +    +G T L +
Sbjct: 200 AITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLL 259

Query: 648 AAKKNQMDIATTLLEYNAKPNA 669
           A +     IA  L +  A  + 
Sbjct: 260 AVELKLKKIAELLCKRGASTDC 281

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  248 bits (636), Expect = 3e-76
 Identities = 82/290 (28%), Positives = 120/290 (41%), Gaps = 25/290 (8%)

Query: 124 ATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRD-GLTPLHCAARSGHDNVIDILIE 182
           A   +   L  A +   V +V+ L+  GAN+  +  + G TPLH A +   ++++++L+ 
Sbjct: 1   AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR 60

Query: 183 KGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRV 242
            GA    + KNG  P  +A+        ++ +  GA V+E      TA   A+  G V+ 
Sbjct: 61  HGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 120

Query: 243 AKTLLDRKADPNAR----------ALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRK- 291
            K L  R A+ N R             G T L  A +K         HV V K LLD   
Sbjct: 121 LKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK--------GHVEVLKILLDEMG 172

Query: 292 ADPNARALNGFTPLHIACKKNRYK----VVELLLKYGASIAATTESGLTPLHVASFMGCM 347
           AD NA    G   L  A   +       +  LLL +GA +    E G TPL +A     +
Sbjct: 173 ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHL 232

Query: 348 NIAIFLL-QAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDAR 396
            +   LL Q     +     G+T L LA       I  +L + GAS D  
Sbjct: 233 GLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  246 bits (630), Expect = 2e-75
 Identities = 78/345 (22%), Positives = 127/345 (36%), Gaps = 70/345 (20%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARARED-QTPLHVASRLGNGDIASLLLQHGAS 484
               L  A +    D+V+ LL  GA+V+ +  E   TPLH A ++   DI  LLL+HGA 
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD 64

Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
                K+G T   ++A  G  ++  +    GA +      GFT    AA YG++K  + L
Sbjct: 65  PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 124

Query: 545 LQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD-APVDS 603
            ++ A V+ + K       +        K G T L  AA+ G +++ ++LL +  A V++
Sbjct: 125 YKRGANVNLRRK-------TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA 177

Query: 604 QGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEY 663
               G   L  A      +                             +   I   LL++
Sbjct: 178 CDNMGRNALIHALLSSDDS-----------------------------DVEAITHLLLDH 208

Query: 664 NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
            A  N   + G TPL L+ ++ H  +   L+E                            
Sbjct: 209 GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ--------------------------- 241

Query: 724 TITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNA 768
                   EI+     G T L +A       +   L + GA+ + 
Sbjct: 242 -----EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 281

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  244 bits (626), Expect = 6e-75
 Identities = 78/303 (25%), Positives = 125/303 (41%), Gaps = 31/303 (10%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALN-GFTPLHIACKKNRYKVV 317
                L  A +           V + + LL+  A+ N +    G+TPLH A + +R  +V
Sbjct: 4   EDNHLLIKAVQNE--------DVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIV 55

Query: 318 ELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARA 377
           ELLL++GA      ++G TP  +A+  G + +    L  GA  +     G T    AA  
Sbjct: 56  ELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY 115

Query: 378 NQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARAN 437
            +   ++ L + GA+V+ R +  +    +                   G T L  AA   
Sbjct: 116 GKVKALKFLYKRGANVNLRRKTKEDQERLRK----------------GGATALMDAAEKG 159

Query: 438 QTDIVRILLRN-GASVDARAREDQTPLHVASRLGNGD----IASLLLQHGASVDAPTKDG 492
             ++++ILL   GA V+A     +  L  A    +      I  LLL HGA V+   + G
Sbjct: 160 HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERG 219

Query: 493 YTALHISAKEGQDEVASILTES-GASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPV 551
            T L ++ ++    +   L E     I  T   G T L LA +    KIA++L ++ A  
Sbjct: 220 KTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279

Query: 552 DSQ 554
           D  
Sbjct: 280 DCG 282

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  240 bits (614), Expect = 3e-73
 Identities = 75/296 (25%), Positives = 122/296 (41%), Gaps = 32/296 (10%)

Query: 522 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHL 581
             +    L  A +   + + Q LL+  A V+ Q +                + G+TPLH 
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEE----------------EGGWTPLHN 45

Query: 582 AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNG 641
           A +  R  I ++LL+  A    + KNG TP  +A+      +  L L +GA  +     G
Sbjct: 46  AVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYG 105

Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESK----------AGFTPLHLSAQEGHTDMSS 691
           +T    AA   ++     L +  A  N   K           G T L  +A++GH ++  
Sbjct: 106 FTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLK 165

Query: 692 LLIEH-GATVSHQAKNGLTPLHLCAQE-DKVNVATITMF---NGAEIDPVTKAGFTPLHI 746
           +L++  GA V+     G   L       D  +V  IT     +GA+++   + G TPL +
Sbjct: 166 ILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLIL 225

Query: 747 ASHFGQLNMVRYLVEN-GANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA 801
           A     L +V+ L+E     +N T + G T L  A +     I +LL   GA  + 
Sbjct: 226 AVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 281

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  233 bits (596), Expect = 1e-70
 Identities = 80/321 (24%), Positives = 124/321 (38%), Gaps = 58/321 (18%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKYGASI-AATTESGLTPLHVASFMGCMNIAIFLLQAGA 358
                L  A +     +V+ LL+ GA++     E G TPLH A  M   +I   LL+ GA
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 359 APDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQ 418
            P      G TP  LAA A    ++++ L  GA V+                        
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFY------------------- 104

Query: 419 SALTRVRGETPLHLAARANQTDIVRILLRNGASVDARARED----------QTPLHVASR 468
                  G T    AA   +   ++ L + GA+V+ R +             T L  A+ 
Sbjct: 105 -------GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157

Query: 469 LGNGDIASLLLQH-GASVDAPTKDGYTALHISAKEGQD----EVASILTESGASITATTK 523
            G+ ++  +LL   GA V+A    G  AL  +     D     +  +L + GA +    +
Sbjct: 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE 217

Query: 524 KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAA 583
           +G TPL LA +   + + Q LL+++                   I  T   G T L LA 
Sbjct: 218 RGKTPLILAVEKKHLGLVQRLLEQE----------------HIEINDTDSDGKTALLLAV 261

Query: 584 KYGRMKIAQMLLQKDAPVDSQ 604
           +    KIA++L ++ A  D  
Sbjct: 262 ELKLKKIAELLCKRGASTDCG 282

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  197 bits (503), Expect = 2e-57
 Identities = 64/239 (26%), Positives = 92/239 (38%), Gaps = 29/239 (12%)

Query: 572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKN-GVTPLHVASHYDHQNVALLLLDR 630
             +    L  A +   + + Q LL+  A V+ Q +  G TPLH A     +++  LLL  
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61

Query: 631 GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMS 690
           GA P    KNG TP  +AA    + +    L   A  N     GFT    +A  G     
Sbjct: 62  GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 121

Query: 691 SLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHF 750
             L + GA V+ + K                          + + + K G T L  A+  
Sbjct: 122 KFLYKRGANVNLRRK-----------------------TKEDQERLRKGGATALMDAAEK 158

Query: 751 GQLNMVRYLV-ENGANVNATTNLGYTPLHQASQQGRVL----IIDLLLGAGAQPNATTN 804
           G + +++ L+ E GA+VNA  N+G   L  A           I  LLL  GA  N    
Sbjct: 159 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE 217

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  185 bits (473), Expect = 3e-53
 Identities = 60/276 (21%), Positives = 107/276 (38%), Gaps = 28/276 (10%)

Query: 2   QQGHDRVVAVLLE-----NDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLS 56
           Q     +V  LLE     N  + +     LH A +        LLL    ++  L     
Sbjct: 14  QNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG-ADPVLRKKNG 72

Query: 57  NTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLS 116
            T   ++         G  ++ K+ +  GA +N     GFT    AA       +++L  
Sbjct: 73  ATPFLLAAIA------GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK 126

Query: 117 KGGN----------QTLATEHNITPLHVACKWGKVAMVELLISK-GANIEAKTRDGLTPL 165
           +G N          Q    +   T L  A + G V ++++L+ + GA++ A    G   L
Sbjct: 127 RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNAL 186

Query: 166 HCAARSGHDN----VIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLI-YHGAGV 220
             A  S  D+    +  +L++ GA +  + + G  PL +A +  H    + L+      +
Sbjct: 187 IHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEI 246

Query: 221 DEITVDYLTALHVASHCGHVRVAKTLLDRKADPNAR 256
           ++   D  TAL +A      ++A+ L  R A  +  
Sbjct: 247 NDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  247 bits (634), Expect = 1e-76
 Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 3/237 (1%)

Query: 568 ITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLL 627
           +T         +  A +YG  +  + L++    V    K  VT LH A+  +  ++    
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYY 61

Query: 628 LDRGASPHAVAKN-GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGH 686
           + +GA    +  +   TPLH A ++  + +   L++Y A P+     G + +HL+AQ GH
Sbjct: 62  ISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGH 121

Query: 687 TDMSSLLIEHGATVSHQAKNGLTPLHLCAQE-DKVNVATITMFNGAEIDPVTKA-GFTPL 744
           T + + LI  G  V    +NG+TPL   A     V+   + +     ++   K    T L
Sbjct: 122 TSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTAL 181

Query: 745 HIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA 801
           H A   G   ++  L+E GANV+A    G + L  A Q+  V +I+ L  A      
Sbjct: 182 HWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGY 238

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  235 bits (601), Expect = 6e-72
 Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 11/245 (4%)

Query: 88  INVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELL 147
           +          +  A Q       R L+  G +     + N+T LH A    ++ +V+  
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYY 61

Query: 148 ISKGANIEAKTRD-GLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDH 206
           ISKGA ++    D   TPLH A R GH +++  L++ GA        G + +H+A+Q  H
Sbjct: 62  ISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGH 121

Query: 207 EAATRVLIYHGAGVDEITVDYLTALHVASHCGH-VRVAKTLLDRKADPNARA-LNGFTPL 264
            +    LI  G  VD +  + +T L  A++  H V   + LL      N     +  T L
Sbjct: 122 TSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTAL 181

Query: 265 HIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYG 324
           H A            +  V   LL+  A+ +A+ + G + L +A ++    ++  L +  
Sbjct: 182 HWAVLA--------GNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEAR 233

Query: 325 ASIAA 329
            +   
Sbjct: 234 QAKGY 238

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  233 bits (598), Expect = 2e-71
 Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 9/235 (3%)

Query: 126 EHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGA 185
           +++   +  A ++G       L+  G ++    ++ +T LH AA +   +++   I KGA
Sbjct: 7   DYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGA 66

Query: 186 ALYSKTKN-GLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAK 244
            +     +    PLH A++  H +    L+ +GA    I  +  + +H+A+  GH  +  
Sbjct: 67  IVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVA 126

Query: 245 TLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARA-LNGFT 303
            L+ +  D +    NG TPL  A  +        + V   + LL      N     +  T
Sbjct: 127 YLIAKGQDVDMMDQNGMTPLMWAAYRT-------HSVDPTRLLLTFNVSVNLGDKYHKNT 179

Query: 304 PLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGA 358
            LH A       V+ LLL+ GA++ A    G + L +A     + +   L +A  
Sbjct: 180 ALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQ 234

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  233 bits (598), Expect = 2e-71
 Identities = 58/246 (23%), Positives = 95/246 (38%), Gaps = 11/246 (4%)

Query: 153 NIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRV 212
           ++          +  A + G       L+E G  +    K  +  LH A+  +     + 
Sbjct: 1   HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKY 60

Query: 213 LIYHGAGVDEITVDY-LTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKN 271
            I  GA VD++  D   T LH A+  GH+ +   L+   ADP+     G + +H+A +  
Sbjct: 61  YISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQF- 119

Query: 272 RYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYK-VVELLLKYGASI-AA 329
                   H  +   L+ +  D +    NG TPL  A  +        LLL +  S+   
Sbjct: 120 -------GHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLG 172

Query: 330 TTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRN 389
                 T LH A   G   +   LL+AGA  D   ++GE+ L LA +     ++  L   
Sbjct: 173 DKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEA 232

Query: 390 GASVDA 395
             +   
Sbjct: 233 RQAKGY 238

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  224 bits (573), Expect = 6e-68
 Identities = 65/269 (24%), Positives = 103/269 (38%), Gaps = 35/269 (13%)

Query: 254 NARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNR 313
                     +  A +               + L++   D         T LH A   NR
Sbjct: 3   THIDDYSTWDIVKATQYG--------IYERCRELVEAGYDVRQPDKENVTLLHWAAINNR 54

Query: 314 YKVVELLLKYGASI-AATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLH 372
             +V+  +  GA +     +   TPLH A+  G +++ + L++ GA P      G + +H
Sbjct: 55  IDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIH 114

Query: 373 LAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHL 432
           LAA+   T IV  L+  G  VD   +   TPL  A+                        
Sbjct: 115 LAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAY----------------------- 151

Query: 433 AARANQTDIVRILLRNGASVDARARED-QTPLHVASRLGNGDIASLLLQHGASVDAPTKD 491
             R +  D  R+LL    SV+   +    T LH A   GN  + SLLL+ GA+VDA    
Sbjct: 152 --RTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIK 209

Query: 492 GYTALHISAKEGQDEVASILTESGASITA 520
           G +AL ++ +     + + L E+  +   
Sbjct: 210 GESALDLAKQRKNVWMINHLQEARQAKGY 238

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  223 bits (570), Expect = 2e-67
 Identities = 61/270 (22%), Positives = 103/270 (38%), Gaps = 35/270 (12%)

Query: 220 VDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCN 279
           +  I       +  A+  G     + L++   D         T LH A   N        
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINN-------- 53

Query: 280 HVWVAKTLLDRKADPNARALN-GFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPL 338
            + + K  + + A  +    +   TPLH A ++    +V  L+KYGA  +     G + +
Sbjct: 54  RIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCI 113

Query: 339 HVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAA-RANQTDIVRILLRNGASVDARA 397
           H+A+  G  +I  +L+  G   D     G TPL  AA R +  D  R+LL    SV+   
Sbjct: 114 HLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGD 173

Query: 398 REDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAR 457
           +                             T LH A  A  T ++ +LL  GA+VDA+  
Sbjct: 174 KYH-------------------------KNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208

Query: 458 EDQTPLHVASRLGNGDIASLLLQHGASVDA 487
           + ++ L +A +  N  + + L +   +   
Sbjct: 209 KGESALDLAKQRKNVWMINHLQEARQAKGY 238

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  221 bits (567), Expect = 5e-67
 Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 11/227 (4%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQ-TLATEHNITP 131
           G  E  + LV+ G  +        T L+ AA  N   +V+Y +SKG     L  + N TP
Sbjct: 20  GIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTP 79

Query: 132 LHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKT 191
           LH A + G ++MV  L+  GA+      +G + +H AA+ GH +++  LI KG  +    
Sbjct: 80  LHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMD 139

Query: 192 KNGLAPLHMASQGDHEAAT-RVLIYHGAGVDEIT-VDYLTALHVASHCGHVRVAKTLLDR 249
           +NG+ PL  A+   H     R+L+     V+        TALH A   G+  V   LL+ 
Sbjct: 140 QNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA 199

Query: 250 KADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNA 296
            A+ +A+ + G + L +A ++         +VW+   L + +     
Sbjct: 200 GANVDAQNIKGESALDLAKQR--------KNVWMINHLQEARQAKGY 238

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  218 bits (559), Expect = 7e-66
 Identities = 59/275 (21%), Positives = 97/275 (35%), Gaps = 44/275 (16%)

Query: 327 IAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRIL 386
           +    +     +  A+  G       L++AG           T LH AA  N+ D+V+  
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYY 61

Query: 387 LRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILL 446
           +  GA VD    +                            TPLH A R     +V  L+
Sbjct: 62  ISKGAIVDQLGGD-------------------------LNSTPLHWATRQGHLSMVVQLM 96

Query: 447 RNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEG-QD 505
           + GA       E  + +H+A++ G+  I + L+  G  VD   ++G T L  +A      
Sbjct: 97  KYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSV 156

Query: 506 EVASILTESGASITATTKK-GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTES 564
           +   +L     S+    K    T LH A   G   +  +LL+                  
Sbjct: 157 DPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA----------------- 199

Query: 565 GASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA 599
           GA++ A   KG + L LA +   + +   L +   
Sbjct: 200 GANVDAQNIKGESALDLAKQRKNVWMINHLQEARQ 234

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  188 bits (480), Expect = 8e-55
 Identities = 51/261 (19%), Positives = 97/261 (37%), Gaps = 47/261 (18%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
           Q G       L+E         K  +  LH AA                           
Sbjct: 18  QYGIYERCRELVEAGYDVRQPDKENVTLLHWAAIN------------------------- 52

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLN-GFTPLYMAAQENHDGVVRYLLS 116
                           + ++ K  +  GA ++    +   TPL+ A ++ H  +V  L+ 
Sbjct: 53  ---------------NRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMK 97

Query: 117 KGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHD-N 175
            G + +L      + +H+A ++G  ++V  LI+KG +++   ++G+TPL  AA   H  +
Sbjct: 98  YGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVD 157

Query: 176 VIDILIEKGAALYSKTK-NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVA 234
              +L+    ++    K +    LH A    +     +L+  GA VD   +   +AL +A
Sbjct: 158 PTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLA 217

Query: 235 SHCGHVRVAKTLLDRKADPNA 255
               +V +   L + +     
Sbjct: 218 KQRKNVWMINHLQEARQAKGY 238

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  171 bits (437), Expect = 8e-49
 Identities = 48/240 (20%), Positives = 81/240 (33%), Gaps = 49/240 (20%)

Query: 601 VDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTL 660
           +          +  A+ Y        L++ G       K   T LH AA  N++D+    
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYY 61

Query: 661 LEYNAKPNAESK-AGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDK 719
           +   A  +        TPLH + ++GH  M   L+++GA  S     G            
Sbjct: 62  ISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEG------------ 109

Query: 720 VNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQ 779
                                 + +H+A+ FG  ++V YL+  G +V+     G TPL  
Sbjct: 110 ---------------------CSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMW 148

Query: 780 ASQQGRVL-IIDLLLGAGAQPNATTN------LFC--------CATILVKNGAEIDPVTK 824
           A+ +   +    LLL      N          L            ++L++ GA +D    
Sbjct: 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 92.1 bits (230), Expect = 5e-21
 Identities = 25/161 (15%), Positives = 45/161 (27%), Gaps = 44/161 (27%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
           Q GH  +VA L+      D   +  +  L  AA +                         
Sbjct: 118 QFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSV--------------------- 156

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQ-SLNGFTPLYMAAQENHDGVVRYLLS 116
                             +  ++L+    ++N+    +  T L+ A    +  V+  LL 
Sbjct: 157 ------------------DPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLE 198

Query: 117 KGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAK 157
            G N         + L +A +   V M+  L          
Sbjct: 199 AGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYD 239

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 47.8 bits (115), Expect = 5e-06
 Identities = 10/69 (14%), Positives = 19/69 (27%), Gaps = 13/69 (18%)

Query: 765 NVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN-----LFC--------CATI 811
           ++    +     + +A+Q G       L+ AG             L              
Sbjct: 1   HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKY 60

Query: 812 LVKNGAEID 820
            +  GA +D
Sbjct: 61  YISKGAIVD 69

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  245 bits (629), Expect = 5e-76
 Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 9/239 (3%)

Query: 88  INVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELL 147
             ++  N  +PL+ AA+  H  +   L+  G N    +E   TPL  A +   +  V+ L
Sbjct: 4   FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYL 63

Query: 148 ISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAA-LYSKTKNGLAPLHMASQGDH 206
           I  GA ++ K  +G T LH AA+ GH  V+  L+  G   +  +   G  P+  A++  H
Sbjct: 64  IKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKH 123

Query: 207 EAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHI 266
               ++L+  G+ ++    +    LH A+  G V +A+ LL  K D +A  ++G +PLHI
Sbjct: 124 VDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHI 183

Query: 267 ACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGA 325
           A ++        N        L R +D   +   G TPL  A   ++      + K   
Sbjct: 184 AARE--------NRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  243 bits (623), Expect = 5e-75
 Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 16/247 (6%)

Query: 452 VDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASIL 511
                +  ++PLH A+  G+ DI  +L+Q GA++D  ++D  T L  +A+    E    L
Sbjct: 4   FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYL 63

Query: 512 TESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITAT 571
            ++GA +     +G T LHLAAK G  ++ Q LL                      +   
Sbjct: 64  IKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ----------------MDVNCQ 107

Query: 572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRG 631
              G+TP+  A +Y  + + ++LL K + ++ +       LH A+     ++A +LL   
Sbjct: 108 DDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAK 167

Query: 632 ASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSS 691
              HAV  +G +PLHIAA++N+ D     L  ++    ++K G TPL  ++       + 
Sbjct: 168 CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSAL 227

Query: 692 LLIEHGA 698
            + +   
Sbjct: 228 QMSKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  240 bits (616), Expect = 4e-74
 Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 9/241 (3%)

Query: 152 ANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATR 211
            N + + ++  +PLH AA +GH ++  +L++ GA + + +++   PL  A++ +H  A +
Sbjct: 2   MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVK 61

Query: 212 VLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKA-DPNARALNGFTPLHIACKK 270
            LI  GA VD    +  T LH+A+  GH  V + LL     D N +   G+TP+  A + 
Sbjct: 62  YLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEY 121

Query: 271 NRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAAT 330
                    HV + K LL + +D N R       LH A       + E+LL     + A 
Sbjct: 122 K--------HVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAV 173

Query: 331 TESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNG 390
              G +PLH+A+     +  +  L   +        GETPL  A+  +Q      + +  
Sbjct: 174 NIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKAL 233

Query: 391 A 391
            
Sbjct: 234 Q 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  237 bits (607), Expect = 9e-73
 Identities = 67/241 (27%), Positives = 114/241 (47%), Gaps = 18/241 (7%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
             +PLH AA A   DI  +L++ GA++D  + + +TPL  A+   + +    L++ GA V
Sbjct: 11  KRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV 70

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGAS-ITATTKKGFTPLHLAAKYGRMKIAQML 544
           D    +G T LH++AK+G  EV   L  +G   +      G+TP+  A +Y  + + ++L
Sbjct: 71  DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLL 130

Query: 545 LQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQ 604
           L K                 G+ I     +    LH AA  G + IA++LL     + + 
Sbjct: 131 LSK-----------------GSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAV 173

Query: 605 GKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN 664
             +G +PLH+A+  +  +  +L L R +      K G TPL  A+  +Q+  A  + +  
Sbjct: 174 NIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKAL 233

Query: 665 A 665
            
Sbjct: 234 Q 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  236 bits (604), Expect = 2e-72
 Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 1/231 (0%)

Query: 568 ITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLL 627
                +   +PLH AA+ G + I  ML+Q  A +D+  ++  TPL  A+  +H      L
Sbjct: 4   FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYL 63

Query: 628 LDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK-PNAESKAGFTPLHLSAQEGH 686
           +  GA        G T LH+AAKK   ++   LL       N +   G+TP+  + +  H
Sbjct: 64  IKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKH 123

Query: 687 TDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHI 746
            D+  LL+  G+ ++ +       LH  A    V++A I +    ++  V   G +PLHI
Sbjct: 124 VDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHI 183

Query: 747 ASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
           A+   + + V   +   ++V      G TPL  AS   +V     +  A  
Sbjct: 184 AARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  233 bits (598), Expect = 2e-71
 Identities = 67/259 (25%), Positives = 112/259 (43%), Gaps = 27/259 (10%)

Query: 292 ADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAI 351
            +      N  +PLH A +     +  +L++ GA+I   +E   TPL  A+    +    
Sbjct: 2   MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVK 61

Query: 352 FLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGAS-VDARAREDQTPLHVASRL 410
           +L++AGA  D     G T LHLAA+    ++V+ LL NG   V+ +              
Sbjct: 62  YLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDG----------- 110

Query: 411 RRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLG 470
                          G TP+  A      D+V++LL  G+ ++ R  E+   LH A+  G
Sbjct: 111 ---------------GWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSG 155

Query: 471 NGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLH 530
             DIA +LL     + A    G + LHI+A+E + +   +     + +T   K+G TPL 
Sbjct: 156 CVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQ 215

Query: 531 LAAKYGRMKIAQMLLQKDA 549
            A+   ++  A  + +   
Sbjct: 216 CASLNSQVWSALQMSKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  230 bits (589), Expect = 3e-70
 Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 18/240 (7%)

Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
                ++  + LH +A+ G  ++  +L ++GA+I   ++   TPL  AA+   ++  + L
Sbjct: 4   FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYL 63

Query: 545 LQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAP-VDS 603
           ++                  GA +     +G T LHLAAK G  ++ Q LL      V+ 
Sbjct: 64  IKA-----------------GALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNC 106

Query: 604 QGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEY 663
           Q   G TP+  A+ Y H ++  LLL +G+  +         LH AA    +DIA  LL  
Sbjct: 107 QDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAA 166

Query: 664 NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
               +A +  G +PLH++A+E   D   L +   + V+ + K G TPL   +   +V  A
Sbjct: 167 KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSA 226

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  205 bits (525), Expect = 4e-61
 Identities = 49/205 (23%), Positives = 99/205 (48%), Gaps = 1/205 (0%)

Query: 601 VDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTL 660
              + +N  +PLH A+   H ++  +L+  GA+    +++  TPL  AA+ N ++    L
Sbjct: 4   FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYL 63

Query: 661 LEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT-VSHQAKNGLTPLHLCAQEDK 719
           ++  A  + +   G T LHL+A++GH ++   L+ +G   V+ Q   G TP+    +   
Sbjct: 64  IKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKH 123

Query: 720 VNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQ 779
           V++  + +  G++I+         LH A+  G +++   L+    +++A    G +PLH 
Sbjct: 124 VDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHI 183

Query: 780 ASQQGRVLIIDLLLGAGAQPNATTN 804
           A+++ R   + L L   +       
Sbjct: 184 AARENRYDCVVLFLSRDSDVTLKNK 208

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  186 bits (476), Expect = 3e-54
 Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 1/181 (0%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKG-GNQTLATEHNITP 131
              E  K L+  GA ++ +   G T L++AA++ H  VV+YLLS G  +     +   TP
Sbjct: 55  NHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTP 114

Query: 132 LHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKT 191
           +  A ++  V +V+LL+SKG++I  +  +    LH AA SG  ++ +IL+     L++  
Sbjct: 115 MIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVN 174

Query: 192 KNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKA 251
            +G +PLH+A++ +      + +   + V     +  T L  AS    V  A  +     
Sbjct: 175 IHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQ 234

Query: 252 D 252
           D
Sbjct: 235 D 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  160 bits (407), Expect = 8e-45
 Identities = 52/222 (23%), Positives = 82/222 (36%), Gaps = 45/222 (20%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
           +  H   V  L++     D K       LH+AAKK                         
Sbjct: 53  ENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKK------------------------- 87

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGAT-INVQSLNGFTPLYMAAQENHDGVVRYLLS 116
                          G  EV + L+ NG   +N Q   G+TP+  A +  H  +V+ LLS
Sbjct: 88  ---------------GHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLS 132

Query: 117 KGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNV 176
           KG +  +        LH A   G V + E+L++   ++ A    G +PLH AAR    + 
Sbjct: 133 KGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDC 192

Query: 177 IDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGA 218
           + + + + + +  K K G  PL  AS      +   +     
Sbjct: 193 VVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  138 bits (351), Expect = 3e-37
 Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 14/171 (8%)

Query: 664 NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
           +     E +   +PLH +A+ GH D+  +L++ GA +   +++  TPL   A+ + +   
Sbjct: 1   HMNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAV 60

Query: 724 TITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA-NVNATTNLGYTPLHQASQ 782
              +  GA +DP    G T LH+A+  G   +V+YL+ NG  +VN   + G+TP+  A++
Sbjct: 61  KYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATE 120

Query: 783 QGRVLIIDLLLGAGAQPNATTN-----LFC--------CATILVKNGAEID 820
              V ++ LLL  G+  N   N     L           A IL+    ++ 
Sbjct: 121 YKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLH 171

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 59.0 bits (144), Expect = 8e-10
 Identities = 17/132 (12%), Positives = 41/132 (31%), Gaps = 27/132 (20%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEV--------SFSNT 49
           +  H  +V +LL      + +   +   LH AA       A +LL             ++
Sbjct: 120 EYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDS 179

Query: 50  KLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDG 109
            L ++                   + +   + +   + + +++  G TPL  A+  +   
Sbjct: 180 PLHIAARE---------------NRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVW 224

Query: 110 VVRYLLSKGGNQ 121
               +     + 
Sbjct: 225 SALQMSKALQDS 236

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  241 bits (618), Expect = 4e-74
 Identities = 78/300 (26%), Positives = 123/300 (41%), Gaps = 56/300 (18%)

Query: 252 DPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKK 311
           D N R  +GFTPL IA                                 G    +   ++
Sbjct: 2   DVNVRGPDGFTPLMIASCSG----------------------------GGLETGNSEEEE 33

Query: 312 NRYKVVELLLKYGASI-AATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETP 370
           +   V+   +  GAS+   T  +G T LH+A+     + A  LL+A A  +     G TP
Sbjct: 34  DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 93

Query: 371 LHLAARANQTDIVRILLRNGAS-VDARAREDQTPLHVASRLRRFSSASQSALTRVRGETP 429
           LH A  A+   + +IL+RN A+ +DAR  +                          G TP
Sbjct: 94  LHAAVSADAQGVFQILIRNRATDLDARMHD--------------------------GTTP 127

Query: 430 LHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPT 489
           L LAAR     ++  L+ + A V+A     ++ LH A+ + N D A +LL++GA+ D   
Sbjct: 128 LILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQN 187

Query: 490 KDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA 549
               T L ++A+EG  E A +L +  A+   T      P  +A +     I ++L  +  
Sbjct: 188 NREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  231 bits (591), Expect = 3e-70
 Identities = 65/275 (23%), Positives = 108/275 (39%), Gaps = 30/275 (10%)

Query: 88  INVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELL 147
           +NV+  +GFTPL +A+                         +   +   +    A++   
Sbjct: 3   VNVRGPDGFTPLMIASCSGG--------------------GLETGNSEEEEDAPAVISDF 42

Query: 148 ISKGANIE-AKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDH 206
           I +GA++     R G T LH AAR    +    L+E  A    +   G  PLH A   D 
Sbjct: 43  IYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADA 102

Query: 207 EAATRVLIYHGAG-VDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLH 265
           +   ++LI + A  +D    D  T L +A+      + + L++  AD NA    G + LH
Sbjct: 103 QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALH 162

Query: 266 IACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGA 325
            A        +  N+V  A  LL   A+ + +     TPL +A ++  Y+  ++LL + A
Sbjct: 163 WA--------AAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 214

Query: 326 SIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAP 360
           +   T      P  +A      +I   L       
Sbjct: 215 NRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHH 249

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  230 bits (589), Expect = 6e-70
 Identities = 73/252 (28%), Positives = 110/252 (43%), Gaps = 6/252 (2%)

Query: 518 ITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATT-KKGF 576
           +      GFTPL +A+  G         +++        V S     GAS+   T + G 
Sbjct: 3   VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPA----VISDFIYQGASLHNQTDRTGE 58

Query: 577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGAS-PH 635
           T LHLAA+Y R   A+ LL+  A  + Q   G TPLH A   D Q V  +L+   A+   
Sbjct: 59  TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 118

Query: 636 AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIE 695
           A   +G TPL +AA+     +   L+  +A  NA    G + LH +A   + D + +L++
Sbjct: 119 ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLK 178

Query: 696 HGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNM 755
           +GA    Q     TPL L A+E     A + + + A  D        P  IA      ++
Sbjct: 179 NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDI 238

Query: 756 VRYLVENGANVN 767
           VR L     + +
Sbjct: 239 VRLLDLEHHHHH 250

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  226 bits (580), Expect = 1e-68
 Identities = 79/309 (25%), Positives = 120/309 (38%), Gaps = 65/309 (21%)

Query: 293 DPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIF 352
           D N R  +GFTPL IA                         GL   +         +   
Sbjct: 2   DVNVRGPDGFTPLMIASCSG--------------------GGLETGNSEEEEDAPAVISD 41

Query: 353 LLQAGAAPDTATVR-GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLR 411
            +  GA+    T R GET LHLAAR +++D  + LL   A  + +               
Sbjct: 42  FIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNM------------ 89

Query: 412 RFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGAS-VDARAREDQTPLHVASRLG 470
                         G TPLH A  A+   + +IL+RN A+ +DAR  +  TPL +A+RL 
Sbjct: 90  --------------GRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 135

Query: 471 NGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLH 530
              +   L+   A V+A    G +ALH +A     + A +L ++GA+      +  TPL 
Sbjct: 136 VEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 195

Query: 531 LAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKI 590
           LAA+ G  + A++LL                    A+   T      P  +A +     I
Sbjct: 196 LAAREGSYETAKVLLDH-----------------FANRDITDHMDRLPRDIAQERMHHDI 238

Query: 591 AQMLLQKDA 599
            ++L  +  
Sbjct: 239 VRLLDLEHH 247

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  218 bits (559), Expect = 8e-66
 Identities = 80/300 (26%), Positives = 118/300 (39%), Gaps = 56/300 (18%)

Query: 153 NIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRV 212
           ++  +  DG TPL  A+ SG                     GL   +   + D  A    
Sbjct: 2   DVNVRGPDGFTPLMIASCSGG--------------------GLETGNSEEEEDAPAVISD 41

Query: 213 LIYHGAGVDEITVDY-LTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKN 271
            IY GA +   T     TALH+A+       AK LL+  AD N +   G TPLH A    
Sbjct: 42  FIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA---- 97

Query: 272 RYKSSHCNHVWVAKTLLDRKA-DPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAAT 330
                  +   V + L+  +A D +AR  +G TPL +A +     ++E L+   A + A 
Sbjct: 98  ----VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAV 153

Query: 331 TESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNG 390
            + G + LH A+ +  ++ A+ LL+ GA  D    R ETPL LAAR    +  ++LL + 
Sbjct: 154 DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 213

Query: 391 ASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGA 450
           A+ D                                  P  +A      DIVR+L     
Sbjct: 214 ANRDITDHM--------------------------DRLPRDIAQERMHHDIVRLLDLEHH 247

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  205 bits (524), Expect = 8e-61
 Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 10/225 (4%)

Query: 73  GQEEVAKILVDNGATI-NVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITP 131
               V    +  GA++ N     G T L++AA+ +     + LL    +  +      TP
Sbjct: 34  DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 93

Query: 132 LHVACKWGKVAMVELLISKGA-NIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSK 190
           LH A       + ++LI   A +++A+  DG TPL  AAR   + +++ LI   A + + 
Sbjct: 94  LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAV 153

Query: 191 TKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRK 250
              G + LH A+  ++  A  VL+ +GA  D       T L +A+  G    AK LLD  
Sbjct: 154 DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 213

Query: 251 ADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPN 295
           A+ +        P  IA ++         H  + + L       +
Sbjct: 214 ANRDITDHMDRLPRDIAQER--------MHHDIVRLLDLEHHHHH 250

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  185 bits (472), Expect = 2e-53
 Identities = 53/250 (21%), Positives = 91/250 (36%), Gaps = 14/250 (5%)

Query: 16  DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFE----- 70
           + +G      L IA+            E   +   +   +       SL N         
Sbjct: 4   NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ---GASLHNQTDRTGETA 60

Query: 71  -----ATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLAT 125
                   + + AK L++  A  N+Q   G TPL+ A   +  GV + L+        A 
Sbjct: 61  LHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDAR 120

Query: 126 EHN-ITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKG 184
            H+  TPL +A +     M+E LI+  A++ A    G + LH AA   + +   +L++ G
Sbjct: 121 MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG 180

Query: 185 AALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAK 244
           A    +      PL +A++       +VL+ H A  D           +A    H  + +
Sbjct: 181 ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVR 240

Query: 245 TLLDRKADPN 254
            L       +
Sbjct: 241 LLDLEHHHHH 250

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  158 bits (403), Expect = 5e-44
 Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 13/223 (5%)

Query: 2   QQGHDRVVAVLLEN-----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLS 56
           ++    V++  +       +   +    ALH+AA+     AA  LLE S ++  ++ ++ 
Sbjct: 32  EEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEAS-ADANIQDNMG 90

Query: 57  NTKLEVSLSNTKFEATGQEEVAKILVDNGAT-INVQSLNGFTPLYMAAQENHDGVVRYLL 115
            T L  ++S         + V +IL+ N AT ++ +  +G TPL +AA+   +G++  L+
Sbjct: 91  RTPLHAAVSA------DAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI 144

Query: 116 SKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDN 175
           +   +     +   + LH A     V    +L+  GAN + +     TPL  AAR G   
Sbjct: 145 NSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYE 204

Query: 176 VIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGA 218
              +L++  A           P  +A +  H    R+L     
Sbjct: 205 TAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  130 bits (329), Expect = 4e-34
 Identities = 47/197 (23%), Positives = 79/197 (40%), Gaps = 35/197 (17%)

Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
            +G+TPL IA+                        G    +   +E    + S  I  GA
Sbjct: 8   PDGFTPLMIASCSGG--------------------GLETGNSEEEEDAPAVISDFIYQGA 47

Query: 699 TVS-HQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVR 757
           ++     + G T LHL A+  + + A   +   A+ +     G TPLH A       + +
Sbjct: 48  SLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQ 107

Query: 758 YLVENGA-NVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN-----LFC---- 807
            L+ N A +++A  + G TPL  A++     +++ L+ + A  NA  +     L      
Sbjct: 108 ILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAV 167

Query: 808 ----CATILVKNGAEID 820
                A +L+KNGA  D
Sbjct: 168 NNVDAAVVLLKNGANKD 184

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 67.5 bits (166), Expect = 2e-12
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 14/87 (16%)

Query: 732 EIDPVTKAGFTPLHIASHFGQ-------------LNMVRYLVENGANV-NATTNLGYTPL 777
           +++     GFTPL IAS  G                ++   +  GA++ N T   G T L
Sbjct: 2   DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETAL 61

Query: 778 HQASQQGRVLIIDLLLGAGAQPNATTN 804
           H A++  R      LL A A  N   N
Sbjct: 62  HLAARYSRSDAAKRLLEASADANIQDN 88

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  224 bits (574), Expect = 4e-68
 Identities = 58/270 (21%), Positives = 102/270 (37%), Gaps = 49/270 (18%)

Query: 426 GETPLHLAARANQT----DIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQH 481
           G++ LHLA    +     +++R +  + A ++ +    QTPLH+A      +IA  LL  
Sbjct: 8   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 67

Query: 482 GASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIA 541
           G   +     G T LH++ ++G      +LT+S  +                        
Sbjct: 68  GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTP----------------------- 104

Query: 542 QMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPV 601
                                   + + AT   G T LHLA+ +G + I ++L+   A V
Sbjct: 105 ---------------------HLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV 143

Query: 602 DSQ-GKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTL 660
           ++Q   NG T LH+A    + ++  LLL  GA  + V   GY+P  +   +    I   L
Sbjct: 144 NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQL 203

Query: 661 LEYNAKPNAESKAGFTPLHLSAQEGHTDMS 690
            +   +                +   T+ +
Sbjct: 204 GQLTLENLQMLPESEDEESYDTESEFTEFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  207 bits (529), Expect = 1e-61
 Identities = 60/247 (24%), Positives = 94/247 (38%), Gaps = 25/247 (10%)

Query: 300 NGFTPLHIACKKNR----YKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQ 355
           +G + LH+A          +V+  +    A +        TPLH+A       IA  LL 
Sbjct: 7   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 66

Query: 356 AGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSS 415
           AG  P+    RG TPLHLA        V +L ++  +    +    T  +          
Sbjct: 67  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYN---------- 116

Query: 416 ASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARARED-QTPLHVASRLGNGDI 474
                     G T LHLA+      IV +L+  GA V+A+   + +T LH+A  L N D+
Sbjct: 117 ----------GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL 166

Query: 475 ASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAK 534
            SLLL+ GA V+  T  GY+   ++       +   L +          +         +
Sbjct: 167 VSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTE 226

Query: 535 YGRMKIA 541
               +  
Sbjct: 227 SEFTEFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  204 bits (521), Expect = 1e-60
 Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 11/210 (5%)

Query: 606 KNGVTPLHVASHYDHQNVAL----LLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLL 661
           ++G + LH+A  ++ + + +     +    A  +       TPLH+A   NQ +IA  LL
Sbjct: 6   EDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALL 65

Query: 662 EYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA------KNGLTPLHLCA 715
                P      G TPLHL+ ++G      +L +   T    +       NG T LHL +
Sbjct: 66  GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS 125

Query: 716 QEDKVNVATITMFNGAEIDPVTKA-GFTPLHIASHFGQLNMVRYLVENGANVNATTNLGY 774
               + +  + +  GA+++      G T LH+A      ++V  L++ GA+VN  T  GY
Sbjct: 126 IHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGY 185

Query: 775 TPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           +P      +    I   L     +      
Sbjct: 186 SPYQLTWGRPSTRIQQQLGQLTLENLQMLP 215

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  203 bits (520), Expect = 2e-60
 Identities = 56/240 (23%), Positives = 80/240 (33%), Gaps = 19/240 (7%)

Query: 155 EAKTRDGLTPLHCAARSGH----DNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAAT 210
           +  T DG + LH A           VI  +    A L  +      PLH+A   +     
Sbjct: 2   QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIA 61

Query: 211 RVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADP------NARALNGFTPL 264
             L+  G   +       T LH+A   G +     L      P       A   NG T L
Sbjct: 62  EALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCL 121

Query: 265 HIACKKNRYKSSHCNHVWVAKTLLDRKADPNARA-LNGFTPLHIACKKNRYKVVELLLKY 323
           H+A            ++ + + L+   AD NA+   NG T LH+A       +V LLLK 
Sbjct: 122 HLASIHG--------YLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC 173

Query: 324 GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIV 383
           GA +   T  G +P  +        I   L Q            E        +  T+  
Sbjct: 174 GADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  203 bits (518), Expect = 4e-60
 Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 28/248 (11%)

Query: 487 APTKDGYTALHISA----KEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQ 542
             T+DG + LH++     K    EV   +    A +        TPLHLA    + +IA+
Sbjct: 3   QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAE 62

Query: 543 MLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA--- 599
            LL                   G        +G TPLHLA + G +    +L Q      
Sbjct: 63  ALLGA-----------------GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPH 105

Query: 600 ---PVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAK-NGYTPLHIAAKKNQMD 655
               + +   NG T LH+AS + +  +  LL+  GA  +A    NG T LH+A      D
Sbjct: 106 LHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPD 165

Query: 656 IATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCA 715
           + + LL+  A  N  +  G++P  L+     T +   L +                    
Sbjct: 166 LVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDT 225

Query: 716 QEDKVNVA 723
           + +     
Sbjct: 226 ESEFTEFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  201 bits (513), Expect = 1e-59
 Identities = 47/236 (19%), Positives = 80/236 (33%), Gaps = 19/236 (8%)

Query: 94  NGFTPLYMAAQENHDG----VVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLIS 149
           +G + L++A           V+R +               TPLH+A    +  + E L+ 
Sbjct: 7   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 66

Query: 150 KGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGA------ALYSKTKNGLAPLHMASQ 203
            G + E +   G TPLH A   G    + +L +          L +   NG   LH+AS 
Sbjct: 67  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 126

Query: 204 GDHEAATRVLIYHGAGVDEITVDY-LTALHVASHCGHVRVAKTLLDRKADPNARALNGFT 262
             +     +L+  GA V+        TALH+A    +  +   LL   AD N     G++
Sbjct: 127 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 186

Query: 263 PLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
           P  +   +            + + L     +                +    +  E
Sbjct: 187 PYQLTWGRP--------STRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEFTE 234

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  200 bits (511), Expect = 3e-59
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 19/237 (8%)

Query: 125 TEHNITPLHVACKWGKVA----MVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDIL 180
           TE   + LH+A    + A    ++  +    A +  +     TPLH A  +    + + L
Sbjct: 5   TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64

Query: 181 IEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGA------GVDEITVDYLTALHVA 234
           +  G     +   G  PLH+A +    A+  VL            +     +  T LH+A
Sbjct: 65  LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124

Query: 235 SHCGHVRVAKTLLDRKADPNARA-LNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKAD 293
           S  G++ + + L+   AD NA+   NG T LH+A            +  +   LL   AD
Sbjct: 125 SIHGYLGIVELLVSLGADVNAQEPCNGRTALHLA--------VDLQNPDLVSLLLKCGAD 176

Query: 294 PNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIA 350
            N     G++P  +   +   ++ + L +                   +        
Sbjct: 177 VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  192 bits (491), Expect = 2e-56
 Identities = 55/270 (20%), Positives = 92/270 (34%), Gaps = 53/270 (19%)

Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPL 579
             T+ G + LHLA  +    +               +V   +    A +        TPL
Sbjct: 3   QLTEDGDSFLHLAIIHEEKALTM-------------EVIRQVKGDLAFLNFQNNLQQTPL 49

Query: 580 HLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVA- 638
           HLA    + +IA+ LL      + +   G TPLH+A          +L     +PH  + 
Sbjct: 50  HLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSI 109

Query: 639 -----KNGYTPLHIAAKKNQMDIATTLLEYNAKPNA-ESKAGFTPLHLSAQEGHTDMSSL 692
                 NG+T LH+A+    + I   L+   A  NA E   G T LHL+    + D+ SL
Sbjct: 110 LKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSL 169

Query: 693 LIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQ 752
           L++                                  GA+++ VT  G++P  +      
Sbjct: 170 LLKC---------------------------------GADVNRVTYQGYSPYQLTWGRPS 196

Query: 753 LNMVRYLVENGANVNATTNLGYTPLHQASQ 782
             + + L +                   ++
Sbjct: 197 TRIQQQLGQLTLENLQMLPESEDEESYDTE 226

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  190 bits (485), Expect = 1e-55
 Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 75  EEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHV 134
            EV + +  + A +N Q+    TPL++A   N   +   LL  G +  L      TPLH+
Sbjct: 25  MEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHL 84

Query: 135 ACKWGKVAMVELLISKGAN------IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALY 188
           AC+ G +A V +L            ++A   +G T LH A+  G+  ++++L+  GA + 
Sbjct: 85  ACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN 144

Query: 189 SKTK-NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLL 247
           ++   NG   LH+A    +     +L+  GA V+ +T    +   +       R+ + L 
Sbjct: 145 AQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLG 204

Query: 248 DRKADPNARALNGFTPLHIACKKN 271
               +                +  
Sbjct: 205 QLTLENLQMLPESEDEESYDTESE 228

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  164 bits (418), Expect = 2e-46
 Identities = 39/175 (22%), Positives = 72/175 (41%), Gaps = 7/175 (4%)

Query: 72  TGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNI-- 129
           T Q E+A+ L+  G    ++   G TPL++A ++     V  L        L +      
Sbjct: 55  TNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATN 114

Query: 130 ----TPLHVACKWGKVAMVELLISKGANIEAKT-RDGLTPLHCAARSGHDNVIDILIEKG 184
               T LH+A   G + +VELL+S GA++ A+   +G T LH A    + +++ +L++ G
Sbjct: 115 YNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG 174

Query: 185 AALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGH 239
           A +   T  G +P  +          + L        ++  +        +    
Sbjct: 175 ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEF 229

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  129 bits (328), Expect = 3e-34
 Identities = 36/190 (18%), Positives = 65/190 (34%), Gaps = 14/190 (7%)

Query: 25  ALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDN 84
            LH+A   +  + A  LL     + +L     NT L ++         G      +L  +
Sbjct: 48  PLHLAVITNQPEIAEALLGAG-CDPELRDFRGNTPLHLACEQ------GCLASVGVLTQS 100

Query: 85  GA------TINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHN-ITPLHVACK 137
                    +   + NG T L++A+   + G+V  L+S G +       N  T LH+A  
Sbjct: 101 CTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVD 160

Query: 138 WGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAP 197
                +V LL+  GA++   T  G +P           +   L +               
Sbjct: 161 LQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDE 220

Query: 198 LHMASQGDHE 207
               ++ +  
Sbjct: 221 ESYDTESEFT 230

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 99.5 bits (249), Expect = 1e-23
 Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 51/188 (27%)

Query: 2   QQGHDRVVAVLLENDTKGKVKLP----------ALHIAAKKDDCKAAALLLEVSFSNTKL 51
           +QG    V VL ++ T   +              LH+A+                     
Sbjct: 87  EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH------------------- 127

Query: 52  EVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQ-SLNGFTPLYMAAQENHDGV 110
                                G   + ++LV  GA +N Q   NG T L++A    +  +
Sbjct: 128 ---------------------GYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL 166

Query: 111 VRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAAR 170
           V  LL  G +    T    +P  +        + + L            +          
Sbjct: 167 VSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTE 226

Query: 171 SGHDNVID 178
           S      +
Sbjct: 227 SEFTEFTE 234

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 79.1 bits (196), Expect = 1e-16
 Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 17/107 (15%)

Query: 736 VTKAGFTPLHIASHFGQ----LNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDL 791
           +T+ G + LH+A    +    + ++R +  + A +N   NL  TPLH A    +  I + 
Sbjct: 4   LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEA 63

Query: 792 LLGAGAQPNATTN-----LFC--------CATILVKNGAEIDPVTKL 825
           LLGAG  P          L             +L ++       + L
Sbjct: 64  LLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSIL 110

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  223 bits (571), Expect = 7e-68
 Identities = 69/224 (30%), Positives = 99/224 (44%), Gaps = 9/224 (4%)

Query: 557 VASILTESGASIT-ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVA 615
           V S     GAS+   T + G T LHLAA+Y R   A+ LL+  A  + Q   G TPLH A
Sbjct: 6   VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65

Query: 616 SHYDHQNVALLLLDRGAS-PHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAG 674
              D Q V  +L+   A+   A   +G TPL +AA+     +   L+  +A  NA    G
Sbjct: 66  VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 125

Query: 675 FTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID 734
            + LH +A   + D + +L+++GA    Q     TPL L A+E     A + + + A  D
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185

Query: 735 PVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLH 778
                   P  IA      ++VR L E     +         LH
Sbjct: 186 ITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS-------PQLH 222

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  215 bits (551), Expect = 6e-65
 Identities = 63/246 (25%), Positives = 94/246 (38%), Gaps = 26/246 (10%)

Query: 436 ANQTDIVRILLRNGASVDARARED-QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYT 494
            +   ++   +  GAS+  +     +T LH+A+R    D A  LL+  A  +     G T
Sbjct: 1   GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT 60

Query: 495 ALHISAKEGQDEVASILTESGAS-ITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS 553
            LH +       V  IL  + A+ + A    G TPL LAA+     + + L+        
Sbjct: 61  PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS------ 114

Query: 554 QGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLH 613
                       A + A    G + LH AA    +  A +LL+  A  D Q     TPL 
Sbjct: 115 -----------HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 163

Query: 614 VASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKA 673
           +A+       A +LLD  A+          P  IA ++   DI   L EYN   +     
Sbjct: 164 LAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS----- 218

Query: 674 GFTPLH 679
               LH
Sbjct: 219 --PQLH 222

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  215 bits (550), Expect = 7e-65
 Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 24/244 (9%)

Query: 470 GNGDIASLLLQHGASV-DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTP 528
               + S  +  GAS+ +   + G TALH++A+  + + A  L E+ A        G TP
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 61

Query: 529 LHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRM 588
           LH A       + Q+L++  A                  + A    G TPL LAA+    
Sbjct: 62  LHAAVSADAQGVFQILIRNRA----------------TDLDARMHDGTTPLILAARLAVE 105

Query: 589 KIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIA 648
            + + L+   A V++    G + LH A+  ++ + A++LL  GA+         TPL +A
Sbjct: 106 GMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLA 165

Query: 649 AKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGL 708
           A++   + A  LL++ A  +        P  ++ +  H D+  LL E+            
Sbjct: 166 AREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRS 218

Query: 709 TPLH 712
             LH
Sbjct: 219 PQLH 222

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  211 bits (541), Expect = 2e-63
 Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 28/236 (11%)

Query: 316 VVELLLKYGASI-AATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLA 374
           V+   +  GAS+   T  +G T LH+A+     + A  LL+A A  +     G TPLH A
Sbjct: 6   VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65

Query: 375 ARANQTDIVRILLRNGAS-VDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLA 433
             A+   + +IL+RN A+ +DAR  +                          G TPL LA
Sbjct: 66  VSADAQGVFQILIRNRATDLDARMHD--------------------------GTTPLILA 99

Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
           AR     ++  L+ + A V+A     ++ LH A+ + N D A +LL++GA+ D       
Sbjct: 100 ARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREE 159

Query: 494 TALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA 549
           T L ++A+EG  E A +L +  A+   T      P  +A +     I ++L + + 
Sbjct: 160 TPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL 215

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  207 bits (530), Expect = 5e-62
 Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 11/231 (4%)

Query: 73  GQEEVAKILVDNGATI-NVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITP 131
               V    +  GA++ N     G T L++AA+ +     + LL    +  +      TP
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 61

Query: 132 LHVACKWGKVAMVELLISKGA-NIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSK 190
           LH A       + ++LI   A +++A+  DG TPL  AAR   + +++ LI   A + + 
Sbjct: 62  LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAV 121

Query: 191 TKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRK 250
              G + LH A+  ++  A  VL+ +GA  D       T L +A+  G    AK LLD  
Sbjct: 122 DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 181

Query: 251 ADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNG 301
           A+ +        P  IA ++         H  + + L +     +   L+G
Sbjct: 182 ANRDITDHMDRLPRDIAQER--------MHHDIVRLLDEYNLVRSP-QLHG 223

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  206 bits (527), Expect = 1e-61
 Identities = 65/264 (24%), Positives = 92/264 (34%), Gaps = 48/264 (18%)

Query: 143 MVELLISKGANIE-AKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMA 201
           ++   I +GA++     R G T LH AAR    +    L+E  A    +   G  PLH A
Sbjct: 6   VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA 65

Query: 202 SQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGF 261
              D +   ++LI + A                                 D +AR  +G 
Sbjct: 66  VSADAQGVFQILIRNRA--------------------------------TDLDARMHDGT 93

Query: 262 TPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLL 321
           TPL +A +             + + L++  AD NA    G + LH A   N      +LL
Sbjct: 94  TPLILAARLA--------VEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLL 145

Query: 322 KYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTD 381
           K GA+         TPL +A+  G    A  LL   A  D        P  +A      D
Sbjct: 146 KNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHD 205

Query: 382 IVRILLRNGASVDARAREDQTPLH 405
           IVR+L                 LH
Sbjct: 206 IVRLLDEYNLVR-------SPQLH 222

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  205 bits (524), Expect = 4e-61
 Identities = 69/271 (25%), Positives = 107/271 (39%), Gaps = 52/271 (19%)

Query: 345 GCMNIAIFLLQAGAAPDTATVR-GETPLHLAARANQTDIVRILLRNGASVDARAREDQTP 403
               +    +  GA+    T R GET LHLAAR +++D  + LL   A  + +       
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNM---- 57

Query: 404 LHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGAS-VDARAREDQTP 462
                                 G TPLH A  A+   + +IL+RN A+ +DAR  +  TP
Sbjct: 58  ----------------------GRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTP 95

Query: 463 LHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATT 522
           L +A+RL    +   L+   A V+A    G +ALH +A     + A +L ++GA+     
Sbjct: 96  LILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQN 155

Query: 523 KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLA 582
            +  TPL LAA+ G  + A++LL                    A+   T      P  +A
Sbjct: 156 NREETPLFLAAREGSYETAKVLLDH-----------------FANRDITDHMDRLPRDIA 198

Query: 583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLH 613
            +     I ++L                 LH
Sbjct: 199 QERMHHDIVRLLD-------EYNLVRSPQLH 222

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  199 bits (508), Expect = 7e-59
 Identities = 73/263 (27%), Positives = 105/263 (39%), Gaps = 43/263 (16%)

Query: 204 GDHEAATRVLIYHGAGVDEITVDY-LTALHVASHCGHVRVAKTLLDRKADPNARALNGFT 262
           GD  A     IY GA +   T     TALH+A+       AK LL+  AD N +   G T
Sbjct: 1   GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT 60

Query: 263 PLHIACKKNRYKSSHCNHVWVAKTLLDRKA-DPNARALNGFTPLHIACKKNRYKVVELLL 321
           PLH A   +           V + L+  +A D +AR  +G TPL +A +     ++E L+
Sbjct: 61  PLHAAVSAD--------AQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI 112

Query: 322 KYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTD 381
              A + A  + G + LH A+ +  ++ A+ LL+ GA  D    R ETPL LAAR    +
Sbjct: 113 NSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYE 172

Query: 382 IVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDI 441
             ++LL + A+ D                                  P  +A      DI
Sbjct: 173 TAKVLLDHFANRDITDHM--------------------------DRLPRDIAQERMHHDI 206

Query: 442 VRILLRNGASVDARAREDQTPLH 464
           VR+L                 LH
Sbjct: 207 VRLLDEYNLVR-------SPQLH 222

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  157 bits (401), Expect = 4e-44
 Identities = 44/234 (18%), Positives = 75/234 (32%), Gaps = 52/234 (22%)

Query: 4   GHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTK 59
                   LLE     + +  +    LH A                              
Sbjct: 36  SRSDAAKRLLEASADANIQDNMGRTPLHAAVSA--------------------------- 68

Query: 60  LEVSLSNTKFEATGQEEVAKILVDNGAT-INVQSLNGFTPLYMAAQENHDGVVRYLLSKG 118
                          + V +IL+ N AT ++ +  +G TPL +AA+   +G++  L++  
Sbjct: 69  -------------DAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH 115

Query: 119 GNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVID 178
            +     +   + LH A     V    +L+  GAN + +     TPL  AAR G      
Sbjct: 116 ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAK 175

Query: 179 ILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALH 232
           +L++  A           P  +A +  H    R+L  +              LH
Sbjct: 176 VLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL-------VRSPQLH 222

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  109 bits (276), Expect = 2e-27
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 15/151 (9%)

Query: 685 GHTDMSSLLIEHGATVSHQA-KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTP 743
               + S  I  GA++ +Q  + G T LHL A+  + + A   +   A+ +     G TP
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 61

Query: 744 LHIASHFGQLNMVRYLVENGA-NVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT 802
           LH A       + + L+ N A +++A  + G TPL  A++     +++ L+ + A  NA 
Sbjct: 62  LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAV 121

Query: 803 TN-----LFCCAT--------ILVKNGAEID 820
            +     L   A         +L+KNGA  D
Sbjct: 122 DDLGKSALHWAAAVNNVDAAVVLLKNGANKD 152

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 55.9 bits (136), Expect = 8e-09
 Identities = 21/121 (17%), Positives = 36/121 (29%), Gaps = 44/121 (36%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
              +     VLL+N    D +   +   L +AA++                         
Sbjct: 134 AVNNVDAAVVLLKNGANKDMQNNREETPLFLAARE------------------------- 168

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                          G  E AK+L+D+ A  ++       P  +A +  H  +VR L   
Sbjct: 169 ---------------GSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEY 213

Query: 118 G 118
            
Sbjct: 214 N 214

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  212 bits (542), Expect = 1e-63
 Identities = 54/221 (24%), Positives = 81/221 (36%), Gaps = 16/221 (7%)

Query: 130 TPLHVACKWG-KVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGA--- 185
            PLH AC       + ELL SK + +  K +DG  PLH +       +   L+ K     
Sbjct: 4   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 63

Query: 186 ALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVD--EITVDYLTALHVASHCGHVRVA 243
                  +G  P H+A    +    + L       D  +IT   +T LH+A       V+
Sbjct: 64  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 123

Query: 244 KTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDR-KADPNARALNGF 302
           + L++  A    +      PLH A             + + + L    K+  N +   G+
Sbjct: 124 QFLIENGASVRIKDKFNQIPLHRAASV--------GSLKLIELLCGLGKSAVNWQDKQGW 175

Query: 303 TPLHIACKKNRYKVVELLL-KYGASIAATTESGLTPLHVAS 342
           TPL  A  +       LL+ KYGA        G     VA 
Sbjct: 176 TPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL 216

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  211 bits (540), Expect = 3e-63
 Identities = 55/236 (23%), Positives = 89/236 (37%), Gaps = 19/236 (8%)

Query: 95  GFTPLYMAAQENH-DGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN 153
              PL+ A  EN    V   L SK        +    PLH +  +    +   L+SK  N
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 61

Query: 154 I---EAKTRDGLTPLHCAARSGHDNVIDILIEK--GAALYSKTKNGLAPLHMASQGDHEA 208
           +   +     G TP H A   G+  V+  L ++     L   T  G+  LH+A       
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121

Query: 209 ATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR-KADPNARALNGFTPLHIA 267
            ++ LI +GA V          LH A+  G +++ + L    K+  N +   G+TPL  A
Sbjct: 122 VSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHA 181

Query: 268 CKKNRYKSSHCNHVWVAKTLLDRK-ADPNARALNGFTPLHIACKKNRYKVVELLLK 322
             +         H   A  L+++  A+ +     G     +A  +    V +  L 
Sbjct: 182 LAE--------GHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQ---VKKFFLN 226

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  209 bits (535), Expect = 1e-62
 Identities = 66/246 (26%), Positives = 94/246 (38%), Gaps = 30/246 (12%)

Query: 301 GFTPLHIACKKNRYK-VVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGA- 358
              PLH AC +N +  V ELL    + +    + G  PLH +       I  FLL     
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 61

Query: 359 --APDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSA 416
               D     G TP H+A      ++V+ L       D     +Q               
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQ--------------- 106

Query: 417 SQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIAS 476
                    G T LHLA      ++ + L+ NGASV  + + +Q PLH A+ +G+  +  
Sbjct: 107 ---------GVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIE 157

Query: 477 LLLQHGAS-VDAPTKDGYTALHISAKEGQDEVASILTES-GASITATTKKGFTPLHLAAK 534
           LL   G S V+   K G+T L  +  EG  + A +L E  GA       KG     +A  
Sbjct: 158 LLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217

Query: 535 YGRMKI 540
               K 
Sbjct: 218 EQVKKF 223

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  205 bits (525), Expect = 3e-61
 Identities = 59/275 (21%), Positives = 87/275 (31%), Gaps = 57/275 (20%)

Query: 525 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK 584
              PLH A                        V  +L    + +    + G  PLH +  
Sbjct: 2   SNYPLHQACMENEFFK----------------VQELLHSKPSLLLQKDQDGRIPLHWSVS 45

Query: 585 YGRMKIAQMLLQKDAPV---DSQGKNGVTPLHVASHYDHQNVALLLLDR--GASPHAVAK 639
           +   +I   LL K   V   D    +G TP H+A    +  V   L DR      + +  
Sbjct: 46  FQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITN 105

Query: 640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT 699
            G T LH+A  K   +++  L+E  A    + K    PLH +A  G   +  LL   G  
Sbjct: 106 QGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGK- 164

Query: 700 VSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
                                          + ++   K G+TPL  A   G  +    L
Sbjct: 165 -------------------------------SAVNWQDKQGWTPLFHALAEGHGDAAVLL 193

Query: 760 VEN-GANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
           VE  GA  +   N G      A  +    +    L
Sbjct: 194 VEKYGAEYDLVDNKGAKAEDVALNEQ---VKKFFL 225

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  200 bits (512), Expect = 2e-59
 Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 7/204 (3%)

Query: 75  EEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGN---QTLATEHNITP 131
            +V ++L    + +  +  +G  PL+ +       +  +LLSK  N        +   TP
Sbjct: 16  FKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTP 75

Query: 132 LHVACKWGKVAMVELLISK--GANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
            H+AC  G + +V+ L  +    ++   T  G+T LH A       V   LIE GA++  
Sbjct: 76  FHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRI 135

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHG-AGVDEITVDYLTALHVASHCGHVRVAKTLLD 248
           K K    PLH A+         +L   G + V+       T L  A   GH   A  L++
Sbjct: 136 KDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVE 195

Query: 249 RK-ADPNARALNGFTPLHIACKKN 271
           +  A+ +     G     +A  + 
Sbjct: 196 KYGAEYDLVDNKGAKAEDVALNEQ 219

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  199 bits (508), Expect = 8e-59
 Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 8/205 (3%)

Query: 608 GVTPLHVASHYDHQN-VALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK 666
              PLH A   +    V  LL  + +      ++G  PLH +      +I + LL     
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 61

Query: 667 PNAES---KAGFTPLHLSAQEGHTDMSSLLIEH--GATVSHQAKNGLTPLHLCAQEDKVN 721
            N +     +G+TP H++   G+ ++   L +      ++     G+T LHL   +    
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121

Query: 722 VATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN-VNATTNLGYTPLHQA 780
           V+   + NGA +    K    PLH A+  G L ++  L   G + VN     G+TPL  A
Sbjct: 122 VSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHA 181

Query: 781 SQQGRVLIIDLLLGA-GAQPNATTN 804
             +G      LL+   GA+ +   N
Sbjct: 182 LAEGHGDAAVLLVEKYGAEYDLVDN 206

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  199 bits (508), Expect = 8e-59
 Identities = 60/268 (22%), Positives = 97/268 (36%), Gaps = 51/268 (19%)

Query: 367 GETPLHLAARANQTDIVR-ILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVR 425
              PLH A   N+   V+ +L    + +  + ++                          
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQD-------------------------- 35

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARARED---QTPLHVASRLGNGDIASLLLQH- 481
           G  PLH +      +I   LL    +V+     D    TP H+A  +GN ++   L    
Sbjct: 36  GRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRP 95

Query: 482 -GASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKI 540
               ++  T  G T LH++  +   EV+  L E+GAS+    K    PLH AA  G +K+
Sbjct: 96  LKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKL 155

Query: 541 AQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD-A 599
            ++L                     +++    K+G+TPL  A   G    A +L++K  A
Sbjct: 156 IELLCGLGK----------------SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGA 199

Query: 600 PVDSQGKNGVTPLHVASHYDHQNVALLL 627
             D     G     VA +         L
Sbjct: 200 EYDLVDNKGAKAEDVALNEQV--KKFFL 225

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  189 bits (483), Expect = 2e-55
 Identities = 56/221 (25%), Positives = 89/221 (40%), Gaps = 16/221 (7%)

Query: 197 PLHMASQ-GDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNA 255
           PLH A    +      +L    + + +   D    LH +       +   LL +  + N 
Sbjct: 5   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 64

Query: 256 RAL---NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDR--KADPNARALNGFTPLHIACK 310
                 +G+TP HIAC           ++ V K+L DR  K D N     G T LH+A  
Sbjct: 65  DDYPDDSGWTPFHIACSVG--------NLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVG 116

Query: 311 KNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAP-DTATVRGET 369
           K  ++V + L++ GAS+    +    PLH A+ +G + +   L   G +  +    +G T
Sbjct: 117 KKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWT 176

Query: 370 PLHLAARANQTDIVRILL-RNGASVDARAREDQTPLHVASR 409
           PL  A      D   +L+ + GA  D    +      VA  
Sbjct: 177 PLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  169 bits (432), Expect = 2e-48
 Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 16/231 (6%)

Query: 25  ALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDN 84
            LH A  +++      LL    S    +       L  S+S          E+   L+  
Sbjct: 5   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSF------QAHEITSFLLSK 58

Query: 85  GATINVQSL---NGFTPLYMAAQENHDGVVRYLLSK--GGNQTLATEHNITPLHVACKWG 139
              +N+      +G+TP ++A    +  VV+ L  +    +    T   +T LH+A    
Sbjct: 59  MENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKK 118

Query: 140 KVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAA-LYSKTKNGLAPL 198
              + + LI  GA++  K +    PLH AA  G   +I++L   G + +  + K G  PL
Sbjct: 119 WFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPL 178

Query: 199 HMASQGDHEAATRVLI-YHGAGVDEITVDYLTALHVASHCGHVRVAKTLLD 248
             A    H  A  +L+  +GA  D +      A  VA +     V K  L+
Sbjct: 179 FHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQ---VKKFFLN 226

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  137 bits (349), Expect = 5e-37
 Identities = 44/226 (19%), Positives = 71/226 (31%), Gaps = 54/226 (23%)

Query: 2   QQGHDRVVAVLLEN-------DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVS 54
                 + + LL         D          HIA                         
Sbjct: 45  SFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV---------------------- 82

Query: 55  LSNTKLEVSLSNTKFEATGQEEVAKILVDN--GATINVQSLNGFTPLYMAAQENHDGVVR 112
                             G  EV K L D      +N  +  G T L++A  +    V +
Sbjct: 83  ------------------GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124

Query: 113 YLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN-IEAKTRDGLTPLHCAARS 171
           +L+  G +  +  + N  PLH A   G + ++ELL   G + +  + + G TPL  A   
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184

Query: 172 GHDNVIDILIEK-GAALYSKTKNGLAPLHMASQGDHEAATRVLIYH 216
           GH +   +L+EK GA        G     +A         +  + +
Sbjct: 185 GHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQV---KKFFLNN 227

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  202 bits (516), Expect = 4e-60
 Identities = 73/243 (30%), Positives = 112/243 (46%), Gaps = 19/243 (7%)

Query: 525 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK 584
                +LA      ++ + +L                    +  T T +   T LH A  
Sbjct: 7   NIMICNLAYSGKLDELKERILAD-----------------KSLATRTDQDSRTALHWACS 49

Query: 585 YGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTP 644
            G  +I + LLQ   PV+ +   G +PLH+A+      +   LL +GA  +AV +NG TP
Sbjct: 50  AGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTP 109

Query: 645 LHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA 704
           LH AA KN+ +IA  LLE  A P+A+     T +H +A +G+  M  +L+ + A+ + Q 
Sbjct: 110 LHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQD 169

Query: 705 KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA 764
             G TPLHL   E++V  A   +  GA I    K   TPL +A   G L ++   +  G 
Sbjct: 170 TEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAK--GGLGLILKRLAEGE 227

Query: 765 NVN 767
             +
Sbjct: 228 EAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  198 bits (504), Expect = 2e-58
 Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 10/234 (4%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN 153
           +      +A     D +   +L+     T   + + T LH AC  G   +VE L+  G  
Sbjct: 6   SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP 65

Query: 154 IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVL 213
           +  K   G +PLH AA +G D ++  L+ KGA + +  +NG  PLH A+  +      +L
Sbjct: 66  VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVML 125

Query: 214 IYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRY 273
           +  GA  D       TA+H A+  G++++   LL  KA  N +   G TPLH+AC +   
Sbjct: 126 LEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDE--- 182

Query: 274 KSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASI 327
                  V  AK L+ + A          TPL +A  K    ++   L  G   
Sbjct: 183 -----ERVEEAKFLVTQGASIYIENKEEKTPLQVA--KGGLGLILKRLAEGEEA 229

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  193 bits (491), Expect = 1e-56
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 2/226 (0%)

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
                +LA      ++ + +L   +      ++  T LH A    H  +   LL  G   
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 66

Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
           +     G++PLHIAA     +I   LL   A  NA ++ G TPLH +A +   +++ +L+
Sbjct: 67  NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL 126

Query: 695 EHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLN 754
           E GA    +     T +H  A +  + +  I +F  A  +     G TPLH+A    ++ 
Sbjct: 127 EGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVE 186

Query: 755 MVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
             ++LV  GA++        TPL  A   G + +I   L  G + +
Sbjct: 187 EAKFLVTQGASIYIENKEEKTPLQVAK--GGLGLILKRLAEGEEAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  186 bits (475), Expect = 2e-54
 Identities = 69/243 (28%), Positives = 105/243 (43%), Gaps = 19/243 (7%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
                +LA      ++   +L + +      ++ +T LH A   G+ +I   LLQ G  V
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 66

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           +     G++ LHI+A  G DE+   L   GA + A  + G TPLH AA   R +IA MLL
Sbjct: 67  NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL 126

Query: 546 QKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG 605
           +                  GA+  A      T +H AA  G +K+  +LL   A  + Q 
Sbjct: 127 EG-----------------GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQD 169

Query: 606 KNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
             G TPLH+A   +    A  L+ +GAS +   K   TPL +A     + +    L    
Sbjct: 170 TEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAK--GGLGLILKRLAEGE 227

Query: 666 KPN 668
           + +
Sbjct: 228 EAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  180 bits (457), Expect = 7e-52
 Identities = 68/267 (25%), Positives = 104/267 (38%), Gaps = 43/267 (16%)

Query: 128 NITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAAL 187
           NI   ++A       + E +++  +      +D  T LH A  +GH  +++ L++ G  +
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 66

Query: 188 YSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLL 247
             K   G                                  + LH+A+  G   + K LL
Sbjct: 67  NDKDDAGW---------------------------------SPLHIAASAGXDEIVKALL 93

Query: 248 DRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHI 307
            + A  NA   NG TPLH A  KN           +A  LL+  A+P+A+     T +H 
Sbjct: 94  VKGAHVNAVNQNGCTPLHYAASKN--------RHEIAVMLLEGGANPDAKDHYDATAMHR 145

Query: 308 ACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRG 367
           A  K   K+V +LL Y AS       G TPLH+A     +  A FL+  GA+        
Sbjct: 146 AAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEE 205

Query: 368 ETPLHLAARANQTDIVRILLRNGASVD 394
           +TPL +A       ++   L  G    
Sbjct: 206 KTPLQVAK--GGLGLILKRLAEGEEAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  179 bits (455), Expect = 1e-51
 Identities = 65/260 (25%), Positives = 100/260 (38%), Gaps = 36/260 (13%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
           +     ++A               + + +L  K+       +  T LH AC     ++VE
Sbjct: 6   SNIMICNLAYSGK--------LDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVE 57

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN 378
            LL+ G  +    ++G +PLH+A+  G   I   LL  GA  +     G TPLH AA  N
Sbjct: 58  FLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKN 117

Query: 379 QTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQ 438
           + +I  +LL  GA+ DA+                               T +H AA    
Sbjct: 118 RHEIAVMLLEGGANPDAKDHY--------------------------DATAMHRAAAKGN 151

Query: 439 TDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHI 498
             +V ILL   AS + +  E  TPLH+A      + A  L+  GAS+    K+  T L +
Sbjct: 152 LKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQV 211

Query: 499 SAKEGQDEVASILTESGASI 518
           +   G   +       G   
Sbjct: 212 AK--GGLGLILKRLAEGEEA 229

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  174 bits (442), Expect = 8e-50
 Identities = 66/264 (25%), Positives = 104/264 (39%), Gaps = 36/264 (13%)

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR 249
              + +   ++A  G  +     ++   +       D  TALH A   GH  + + LL  
Sbjct: 3   GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQL 62

Query: 250 KADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIAC 309
               N +   G++PLHIA      +        + K LL + A  NA   NG TPLH A 
Sbjct: 63  GVPVNDKDDAGWSPLHIAASAGXDE--------IVKALLVKGAHVNAVNQNGCTPLHYAA 114

Query: 310 KKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGET 369
            KNR+++  +LL+ GA+  A      T +H A+  G + +   LL   A+ +     G T
Sbjct: 115 SKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNT 174

Query: 370 PLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETP 429
           PLHLA    + +  + L+  GAS+    +E++TPL VA                      
Sbjct: 175 PLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA---------------------- 212

Query: 430 LHLAARANQTDIVRILLRNGASVD 453
                      ++   L  G    
Sbjct: 213 ------KGGLGLILKRLAEGEEAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  172 bits (438), Expect = 3e-49
 Identities = 55/213 (25%), Positives = 90/213 (42%)

Query: 607 NGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK 666
           + +   ++A       +   +L   +      ++  T LH A      +I   LL+    
Sbjct: 6   SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP 65

Query: 667 PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATIT 726
            N +  AG++PLH++A  G  ++   L+  GA V+   +NG TPLH  A +++  +A + 
Sbjct: 66  VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVML 125

Query: 727 MFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRV 786
           +  GA  D       T +H A+  G L MV  L+   A+ N     G TPLH A  + RV
Sbjct: 126 LEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERV 185

Query: 787 LIIDLLLGAGAQPNATTNLFCCATILVKNGAEI 819
                L+  GA              + K G  +
Sbjct: 186 EEAKFLVTQGASIYIENKEEKTPLQVAKGGLGL 218

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  146 bits (369), Expect = 8e-40
 Identities = 55/257 (21%), Positives = 95/257 (36%), Gaps = 46/257 (17%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
               D +   +L +        +    ALH A                            
Sbjct: 16  SGKLDELKERILADKSLATRTDQDSRTALHWACSA------------------------- 50

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                          G  E+ + L+  G  +N +   G++PL++AA    D +V+ LL K
Sbjct: 51  ---------------GHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI 177
           G +     ++  TPLH A    +  +  +L+  GAN +AK     T +H AA  G+  ++
Sbjct: 96  GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155

Query: 178 DILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHC 237
            IL+   A+   +   G  PLH+A   +     + L+  GA +     +  T L VA   
Sbjct: 156 HILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAK-- 213

Query: 238 GHVRVAKTLLDRKADPN 254
           G + +    L    + +
Sbjct: 214 GGLGLILKRLAEGEEAS 230

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  193 bits (492), Expect = 5e-57
 Identities = 40/201 (19%), Positives = 81/201 (40%), Gaps = 5/201 (2%)

Query: 125 TEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKG 184
           T      L  A +     + E+L      ++    +G TPL+ A  +    +   LI++G
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG 62

Query: 185 AALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAG-VDEITVDYLTALHVASHCGHVRVA 243
           A +  +     +P   A           ++ H    +++       AL  A+  GH+   
Sbjct: 63  ADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNV 122

Query: 244 KTLLDR-KADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGF 302
           K LL+  + D + +   G+T L  A         +  +  + K L++  AD + +  +G 
Sbjct: 123 KLLLEDGREDIDFQNDFGYTALIEAVGLR---EGNQLYQDIVKLLMENGADQSIKDNSGR 179

Query: 303 TPLHIACKKNRYKVVELLLKY 323
           T +  A +K   ++ ++L +Y
Sbjct: 180 TAMDYANQKGYTEISKILAQY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  176 bits (450), Expect = 3e-51
 Identities = 48/215 (22%), Positives = 87/215 (40%), Gaps = 24/215 (11%)

Query: 489 TKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD 548
           T +    L  + +    +V  IL ++   +     +G TPL++A     ++IA+ L+ + 
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR- 61

Query: 549 APVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAP-VDSQGKN 607
                           GA I        +P   A   GR +I   +L+   P ++   + 
Sbjct: 62  ----------------GADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRY 105

Query: 608 GVTPLHVASHYDHQNVALLLLDRG-ASPHAVAKNGYTPLHIAA-----KKNQMDIATTLL 661
           G   L  A+   H +   LLL+ G          GYT L  A       +   DI   L+
Sbjct: 106 GGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLM 165

Query: 662 EYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH 696
           E  A  + +  +G T +  + Q+G+T++S +L ++
Sbjct: 166 ENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  176 bits (450), Expect = 4e-51
 Identities = 47/211 (22%), Positives = 79/211 (37%), Gaps = 22/211 (10%)

Query: 460 QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASIT 519
              L  A++     +  +L      VD    +G T L+I+      E+A  L + GA I 
Sbjct: 7   GALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADIN 66

Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPL 579
                  +P   A   GR +I   +L+                     +    + G   L
Sbjct: 67  LQNSISDSPYLYAGAQGRTEILAYMLKHAT----------------PDLNKHNRYGGNAL 110

Query: 580 HLAAKYGRMKIAQMLLQK-DAPVDSQGKNGVTPLHVASHYD-----HQNVALLLLDRGAS 633
             AA+ G +   ++LL+     +D Q   G T L  A         +Q++  LL++ GA 
Sbjct: 111 IPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGAD 170

Query: 634 PHAVAKNGYTPLHIAAKKNQMDIATTLLEYN 664
                 +G T +  A +K   +I+  L +YN
Sbjct: 171 QSIKDNSGRTAMDYANQKGYTEISKILAQYN 201

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  174 bits (444), Expect = 2e-50
 Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 7/195 (3%)

Query: 606 KNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
                 L  A+  D + V  +L D       V   G TPL+IA   N ++IA  L++  A
Sbjct: 4   YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGA 63

Query: 666 KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT-VSHQAKNGLTPLHLCAQEDKVNVAT 724
             N ++    +P   +  +G T++ + +++H    ++   + G   L   A++  ++   
Sbjct: 64  DINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVK 123

Query: 725 ITMFNG-AEIDPVTKAGFTPLHIASHF-----GQLNMVRYLVENGANVNATTNLGYTPLH 778
           + + +G  +ID     G+T L  A           ++V+ L+ENGA+ +   N G T + 
Sbjct: 124 LLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMD 183

Query: 779 QASQQGRVLIIDLLL 793
            A+Q+G   I  +L 
Sbjct: 184 YANQKGYTEISKILA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  174 bits (444), Expect = 2e-50
 Identities = 38/209 (18%), Positives = 76/209 (36%), Gaps = 22/209 (10%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
               L  A + +   +  IL      VD    E  TPL++A    + +IA  L+  GA +
Sbjct: 6   VGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI 65

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGAS-ITATTKKGFTPLHLAAKYGRMKIAQML 544
           +       +    +  +G+ E+ + + +     +    + G   L  AA+ G +   ++L
Sbjct: 66  NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLL 125

Query: 545 LQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKY-----GRMKIAQMLLQKDA 599
           L         G+           I      G+T L  A            I ++L++  A
Sbjct: 126 L-------EDGR---------EDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGA 169

Query: 600 PVDSQGKNGVTPLHVASHYDHQNVALLLL 628
               +  +G T +  A+   +  ++ +L 
Sbjct: 170 DQSIKDNSGRTAMDYANQKGYTEISKILA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  171 bits (437), Expect = 2e-49
 Identities = 46/206 (22%), Positives = 75/206 (36%), Gaps = 15/206 (7%)

Query: 157 KTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYH 216
           KT +    L  A +     V +IL +    +      G  PL++A   +     + LI  
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR 61

Query: 217 GAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKA-DPNARALNGFTPLHIACKKNRYKS 275
           GA ++       +    A   G   +   +L     D N     G   L  A +K     
Sbjct: 62  GADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEK----- 116

Query: 276 SHCNHVWVAKTLLDR-KADPNARALNGFTPLHIACKKNRYK-----VVELLLKYGASIAA 329
               H+   K LL+  + D + +   G+T L  A            +V+LL++ GA  + 
Sbjct: 117 ---GHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSI 173

Query: 330 TTESGLTPLHVASFMGCMNIAIFLLQ 355
              SG T +  A+  G   I+  L Q
Sbjct: 174 KDNSGRTAMDYANQKGYTEISKILAQ 199

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  169 bits (430), Expect = 2e-48
 Identities = 50/219 (22%), Positives = 84/219 (38%), Gaps = 33/219 (15%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA 359
                L  A +++  KV E+L      +      G TPL++A     + IA  L+  GA 
Sbjct: 5   EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD 64

Query: 360 PDTATVRGETPLHLAARANQTDIVRILLRNGAS-VDARAREDQTPLHVASRLRRFSSASQ 418
            +      ++P   A    +T+I+  +L++    ++   R                    
Sbjct: 65  INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRY------------------- 105

Query: 419 SALTRVRGETPLHLAARANQTDIVRILLRNG-ASVDARAREDQTPLHVASRLGNG----- 472
                  G   L  AA     D V++LL +G   +D +     T L  A  L  G     
Sbjct: 106 -------GGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQ 158

Query: 473 DIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASIL 511
           DI  LL+++GA        G TA+  + ++G  E++ IL
Sbjct: 159 DIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKIL 197

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  168 bits (428), Expect = 5e-48
 Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 7/182 (3%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
             ++V +IL D    ++     G TPL +A   N   + + L+ +G +  L    + +P 
Sbjct: 17  DTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPY 76

Query: 133 HVACKWGKVAMVELLISKGA-NIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAA-LYSK 190
             A   G+  ++  ++     ++    R G   L  AA  GH + + +L+E G   +  +
Sbjct: 77  LYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQ 136

Query: 191 TKNGLAPLHMA-----SQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKT 245
              G   L  A         ++   ++L+ +GA          TA+  A+  G+  ++K 
Sbjct: 137 NDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKI 196

Query: 246 LL 247
           L 
Sbjct: 197 LA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  165 bits (420), Expect = 4e-47
 Identities = 46/225 (20%), Positives = 84/225 (37%), Gaps = 33/225 (14%)

Query: 331 TESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNG 390
           T      L  A+      +   L       D     G TPL++A   N  +I + L+  G
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG 62

Query: 391 ASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGA 450
           A ++ +                              ++P   A    +T+I+  +L++  
Sbjct: 63  ADINLQNSI--------------------------SDSPYLYAGAQGRTEILAYMLKHAT 96

Query: 451 S-VDARAREDQTPLHVASRLGNGDIASLLLQHG-ASVDAPTKDGYTALHISA-----KEG 503
             ++   R     L  A+  G+ D   LLL+ G   +D     GYTAL  +       + 
Sbjct: 97  PDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQL 156

Query: 504 QDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD 548
             ++  +L E+GA  +     G T +  A + G  +I+++L Q +
Sbjct: 157 YQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  164 bits (419), Expect = 7e-47
 Identities = 49/225 (21%), Positives = 82/225 (36%), Gaps = 31/225 (13%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
                L  A +++           V + L D     +     G TPL+IA   N  ++ +
Sbjct: 5   EVGALLEAANQRD--------TKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAK 56

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA-PDTATVRGETPLHLAARA 377
            L+  GA I        +P   A   G   I  ++L+      +     G   L  AA  
Sbjct: 57  ALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEK 116

Query: 378 NQTDIVRILLRNG-ASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARA 436
              D V++LL +G   +D +     T L  A  LR  +                      
Sbjct: 117 GHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQ--------------------- 155

Query: 437 NQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQH 481
              DIV++L+ NGA    +    +T +  A++ G  +I+ +L Q+
Sbjct: 156 LYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  162 bits (413), Expect = 5e-46
 Identities = 40/209 (19%), Positives = 81/209 (38%), Gaps = 24/209 (11%)

Query: 522 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHL 581
           T +    L  A +    K+ ++L                  ++   +     +G TPL++
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQ-----------------DTTYQVDEVDTEGNTPLNI 45

Query: 582 AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGAS-PHAVAKN 640
           A     ++IA+ L+ + A ++ Q     +P   A       +   +L       +   + 
Sbjct: 46  AVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRY 105

Query: 641 GYTPLHIAAKKNQMDIATTLLEY-NAKPNAESKAGFTPLHLSA-----QEGHTDMSSLLI 694
           G   L  AA+K  +D    LLE      + ++  G+T L  +       + + D+  LL+
Sbjct: 106 GGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLM 165

Query: 695 EHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
           E+GA  S +  +G T +    Q+    ++
Sbjct: 166 ENGADQSIKDNSGRTAMDYANQKGYTEIS 194

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  144 bits (366), Expect = 1e-39
 Identities = 42/226 (18%), Positives = 79/226 (34%), Gaps = 51/226 (22%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
           Q+   +V  +L +     D         L+IA                            
Sbjct: 15  QRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHN------------------------- 49

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                             E+AK L+D GA IN+Q+    +P   A  +    ++ Y+L  
Sbjct: 50  ---------------NDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKH 94

Query: 118 GG-NQTLATEHNITPLHVACKWGKVAMVELLISKG-ANIEAKTRDGLTPLHCAA-----R 170
              +      +    L  A + G +  V+LL+  G  +I+ +   G T L  A       
Sbjct: 95  ATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGN 154

Query: 171 SGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYH 216
             + +++ +L+E GA    K  +G   +  A+Q  +   +++L  +
Sbjct: 155 QLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  120 bits (304), Expect = 2e-31
 Identities = 25/168 (14%), Positives = 58/168 (34%), Gaps = 35/168 (20%)

Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
                 L  A +++   +   L +   + +     G TPL+++      +++  LI+ GA
Sbjct: 4   YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGA 63

Query: 699 TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY 758
            +    +N                                   +P   A   G+  ++ Y
Sbjct: 64  DI--NLQN-------------------------------SISDSPYLYAGAQGRTEILAY 90

Query: 759 LVENGA-NVNATTNLGYTPLHQASQQGRVLIIDLLLGAG-AQPNATTN 804
           ++++   ++N     G   L  A+++G +  + LLL  G    +   +
Sbjct: 91  MLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQND 138

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 76.7 bits (190), Expect = 4e-16
 Identities = 15/68 (22%), Positives = 23/68 (33%)

Query: 737 TKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG 796
           T      L  A+      +   L +    V+     G TPL+ A     + I   L+  G
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG 62

Query: 797 AQPNATTN 804
           A  N   +
Sbjct: 63  ADINLQNS 70

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  192 bits (491), Expect = 1e-56
 Identities = 41/234 (17%), Positives = 67/234 (28%), Gaps = 23/234 (9%)

Query: 454 ARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTE 513
              +  Q  +  A           L      +   T    T       +G+  +      
Sbjct: 7   KPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGL-----I 61

Query: 514 SGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTK 573
               +    +    PLH AAK G +   +  L                      +    K
Sbjct: 62  PSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDN-----------------RVGVNGLDK 104

Query: 574 KGFTPLHLAAKYGRMKIAQMLL-QKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGA 632
            G T L+ A   G   I +ML  Q +  ++ Q K G T LH A+   + ++  LLL +GA
Sbjct: 105 AGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGA 164

Query: 633 SPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGH 686
                         +A       +       +A     +   +     S  E H
Sbjct: 165 RTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEHH 218

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  192 bits (489), Expect = 2e-56
 Identities = 40/227 (17%), Positives = 63/227 (27%), Gaps = 21/227 (9%)

Query: 425 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGAS 484
            G+  +  A    +      L      +        T     +  G        L     
Sbjct: 11  PGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGR-----TGLIPSNY 65

Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
           V    +     LH +AK G         ++   +    K G T L+ A   G   I +ML
Sbjct: 66  VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEML 125

Query: 545 LQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQ 604
                            T+    +    K G T LH AA  G   I Q+LL K A  D +
Sbjct: 126 F----------------TQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLR 169

Query: 605 GKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKK 651
                    +A++    ++        A         Y     +  +
Sbjct: 170 NIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLE 216

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  192 bits (489), Expect = 2e-56
 Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 14/223 (6%)

Query: 124 ATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEK 183
             +     +  A    +    + L  +  +I   T    T        G        +  
Sbjct: 8   PVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGR-----TGLIP 62

Query: 184 GAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVA 243
              +  + ++   PLH A++  + +  R  + +  GV+ +     TAL+ A H GH  + 
Sbjct: 63  SNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIV 122

Query: 244 KTLLDRK-ADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGF 302
           + L  +   + N +   G T LH A  K         +  + + LL + A  + R +   
Sbjct: 123 EMLFTQPNIELNQQNKLGDTALHAAAWK--------GYADIVQLLLAKGARTDLRNIEKK 174

Query: 303 TPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMG 345
               +A       +++      A    +          +    
Sbjct: 175 LAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEH 217

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  191 bits (488), Expect = 3e-56
 Identities = 42/244 (17%), Positives = 68/244 (27%), Gaps = 32/244 (13%)

Query: 294 PNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFL 353
           P      G   +  A      +  + L      I   T+   T     +  G        
Sbjct: 5   PPKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRT-----G 59

Query: 354 LQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRF 413
           L             + PLH AA+      +R  L N   V+   +               
Sbjct: 60  LIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKA-------------- 105

Query: 414 SSASQSALTRVRGETPLHLAARANQTDIVRILLRN-GASVDARAREDQTPLHVASRLGNG 472
                       G T L+ A      DIV +L       ++ + +   T LH A+  G  
Sbjct: 106 ------------GSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYA 153

Query: 473 DIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLA 532
           DI  LLL  GA  D    +   A  ++       +      + A  T +  + +     +
Sbjct: 154 DIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDS 213

Query: 533 AKYG 536
               
Sbjct: 214 DLEH 217

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  189 bits (482), Expect = 2e-55
 Identities = 37/222 (16%), Positives = 63/222 (28%), Gaps = 14/222 (6%)

Query: 156 AKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIY 215
              + G   +  A  +      D L  +   +   T          +           + 
Sbjct: 7   KPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGR-----TGLI 61

Query: 216 HGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKS 275
               V E        LH A+  G++   +  LD +   N     G T L+ AC       
Sbjct: 62  PSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGG---- 117

Query: 276 SHCNHVWVAKTLLDRK-ADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESG 334
               H  + + L  +   + N +   G T LH A  K    +V+LLL  GA         
Sbjct: 118 ----HKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEK 173

Query: 335 LTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAAR 376
                +A+   C ++        A    +          +  
Sbjct: 174 KLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDL 215

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  188 bits (480), Expect = 4e-55
 Identities = 41/232 (17%), Positives = 63/232 (27%), Gaps = 23/232 (9%)

Query: 487 APTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
            P K G   +  +    +      L      I   T    T        GR  +      
Sbjct: 7   KPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIP---- 62

Query: 547 KDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGK 606
                                +    +    PLH AAK G +   +  L     V+   K
Sbjct: 63  ------------------SNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDK 104

Query: 607 NGVTPLHVASHYDHQNVA-LLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
            G T L+ A H  H+++  +L        +   K G T LH AA K   DI   LL   A
Sbjct: 105 AGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGA 164

Query: 666 KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQE 717
           + +  +        ++       +        A  +               E
Sbjct: 165 RTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLE 216

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  186 bits (475), Expect = 2e-54
 Identities = 37/216 (17%), Positives = 69/216 (31%), Gaps = 6/216 (2%)

Query: 570 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLD 629
              K G   +  A      +    L  ++  +        T     +           L 
Sbjct: 7   KPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGR-----TGLI 61

Query: 630 RGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDM 689
                   A++   PLH AAK+  +      L+     N   KAG T L+ +   GH D+
Sbjct: 62  PSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDI 121

Query: 690 SSLLIEH-GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS 748
             +L       ++ Q K G T LH  A +   ++  + +  GA  D           +A+
Sbjct: 122 VEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMAT 181

Query: 749 HFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQG 784
           +    ++++      A    +    Y     +  + 
Sbjct: 182 NAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEH 217

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  184 bits (469), Expect = 1e-53
 Identities = 33/224 (14%), Positives = 67/224 (29%), Gaps = 14/224 (6%)

Query: 89  NVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLI 148
                 G   ++ A           L  + G+    T+ + T        G        +
Sbjct: 6   PKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKG-----RTGL 60

Query: 149 SKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEA 208
                +  +      PLH AA+ G+ + +   ++    +    K G   L+ A  G H+ 
Sbjct: 61  IPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKD 120

Query: 209 ATRVLIYH-GAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIA 267
              +L       +++      TALH A+  G+  + + LL + A  + R +       +A
Sbjct: 121 IVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMA 180

Query: 268 CKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKK 311
                          + K      A         +     +  +
Sbjct: 181 TNA--------ACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLE 216

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  183 bits (466), Expect = 4e-53
 Identities = 44/226 (19%), Positives = 70/226 (30%), Gaps = 14/226 (6%)

Query: 185 AALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAK 244
                  K G   +  A           L      +  IT    T     +  G      
Sbjct: 3   KPPPKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGR----- 57

Query: 245 TLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTP 304
           T L        +A +   PLH A K+         ++   +  LD +   N     G T 
Sbjct: 58  TGLIPSNYVAEQAESIDNPLHEAAKRG--------NLSWLRECLDNRVGVNGLDKAGSTA 109

Query: 305 LHIACKKNRYKVVELLL-KYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTA 363
           L+ AC      +VE+L  +    +    + G T LH A++ G  +I   LL  GA  D  
Sbjct: 110 LYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLR 169

Query: 364 TVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR 409
            +  +    +A  A    +++      A       ED      +  
Sbjct: 170 NIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDL 215

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  176 bits (449), Expect = 1e-50
 Identities = 34/207 (16%), Positives = 66/207 (31%), Gaps = 6/207 (2%)

Query: 599 APVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIAT 658
            P     K G   +  A +         L         +     T       K +     
Sbjct: 3   KPPPKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGR----- 57

Query: 659 TLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQED 718
           T L  +     ++++   PLH +A+ G+       +++   V+   K G T L+      
Sbjct: 58  TGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGG 117

Query: 719 KVNVATITMFN-GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPL 777
             ++  +       E++   K G T LH A+  G  ++V+ L+  GA  +          
Sbjct: 118 HKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAF 177

Query: 778 HQASQQGRVLIIDLLLGAGAQPNATTN 804
             A+      ++    G  A    +  
Sbjct: 178 DMATNAACASLLKKKQGTDAVRTLSNA 204

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  175 bits (446), Expect = 2e-50
 Identities = 32/199 (16%), Positives = 66/199 (33%), Gaps = 6/199 (3%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
            +      L      I   +    T  +    +   G++              E    PL
Sbjct: 23  FEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLI-----PSNYVAEQAESIDNPL 77

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILI-EKGAALYSKT 191
           H A K G ++ +   +     +    + G T L+ A   GH +++++L  +    L  + 
Sbjct: 78  HEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQN 137

Query: 192 KNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKA 251
           K G   LH A+   +    ++L+  GA  D   ++   A  +A++     + K      A
Sbjct: 138 KLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDA 197

Query: 252 DPNARALNGFTPLHIACKK 270
                    +     +  +
Sbjct: 198 VRTLSNAEDYLDDEDSDLE 216

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  152 bits (385), Expect = 5e-42
 Identities = 30/162 (18%), Positives = 59/162 (36%), Gaps = 1/162 (0%)

Query: 80  ILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWG 139
             +     +  Q+ +   PL+ AA+  +   +R  L          +   T L+ AC  G
Sbjct: 58  TGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGG 117

Query: 140 KVAMVELLISK-GANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPL 198
              +VE+L ++    +  + + G T LH AA  G+ +++ +L+ KGA    +        
Sbjct: 118 HKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAF 177

Query: 199 HMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHV 240
            MA+     +  +      A       +       +    H 
Sbjct: 178 DMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEHHH 219

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  105 bits (263), Expect = 1e-25
 Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 27/182 (14%)

Query: 2   QQGHDRVVAVLLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFS-NTKLEVSLSNTKL 60
            +G   ++      + + +     LH AAK+ +       L+     N            
Sbjct: 54  SKGRTGLIPSNYVAE-QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGL---------- 102

Query: 61  EVSLSNTKFEAT--------GQEEVAKILVDN-GATINVQSLNGFTPLYMAAQENHDGVV 111
                  K  +T        G +++ ++L       +N Q+  G T L+ AA + +  +V
Sbjct: 103 ------DKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIV 156

Query: 112 RYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARS 171
           + LL+KG    L          +A      ++++      A       +       +   
Sbjct: 157 QLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLE 216

Query: 172 GH 173
            H
Sbjct: 217 HH 218

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 8/96 (8%)

Query: 737 TKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG 796
            K G   +  A +  +      L     ++   T++  T   + + +GR  +I     A 
Sbjct: 9   VKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAE 68

Query: 797 AQPNATTNLFC--------CATILVKNGAEIDPVTK 824
              +    L               + N   ++ + K
Sbjct: 69  QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDK 104

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  186 bits (475), Expect = 5e-55
 Identities = 43/203 (21%), Positives = 73/203 (35%), Gaps = 34/203 (16%)

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDA-PVDSQGKNGVTPLHVASHYDHQNVALLLLDRGAS 633
               +H  A  G +   +  L+K    V+   + G TPL  AS +        LL+ GA 
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 634 PHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLL 693
           PH +AK   + L +A+     DI   LLE +   N     G TPL  + +  H      L
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEAL 121

Query: 694 IEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQL 753
           +  GA ++ +A +                                 G+TP+ +A   G  
Sbjct: 122 LARGADLTTEADS---------------------------------GYTPMDLAVALGYR 148

Query: 754 NMVRYLVENGANVNATTNLGYTP 776
            + + +  +   +  +  +   P
Sbjct: 149 KVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  183 bits (468), Expect = 6e-54
 Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 16/186 (8%)

Query: 525 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK 584
               +H  A  G +   +  L+K                    +    ++GFTPL  A+ 
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGD----------------NLVNKPDERGFTPLIWASA 45

Query: 585 YGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTP 644
           +G ++  + LL+  A      K   + L +AS   + ++  LLL+R    +    NG TP
Sbjct: 46  FGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTP 105

Query: 645 LHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA 704
           L  A + N +     LL   A    E+ +G+TP+ L+   G+  +  ++  H   +    
Sbjct: 106 LLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSN 165

Query: 705 KNGLTP 710
                P
Sbjct: 166 LVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  183 bits (468), Expect = 6e-54
 Identities = 44/187 (23%), Positives = 70/187 (37%), Gaps = 18/187 (9%)

Query: 426 GETPLHLAARANQTDIVRILLRNGA-SVDARAREDQTPLHVASRLGNGDIASLLLQHGAS 484
               +H  A   + D ++  LR G   V+       TPL  AS  G  +    LL+ GA 
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
                K+  +AL +++  G  ++  +L E    I      G TPL  A +   +K  + L
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEAL 121

Query: 545 LQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQ 604
           L +                 GA +T     G+TP+ LA   G  K+ Q++      +   
Sbjct: 122 LAR-----------------GADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQS 164

Query: 605 GKNGVTP 611
                 P
Sbjct: 165 NLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  182 bits (465), Expect = 1e-53
 Identities = 35/170 (20%), Positives = 69/170 (40%), Gaps = 1/170 (0%)

Query: 95  GFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHN-ITPLHVACKWGKVAMVELLISKGAN 153
               ++  A +     ++  L KG N     +    TPL  A  +G++  V  L+  GA+
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 154 IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVL 213
                ++  + L  A+  G+ +++ +L+E+   +     NG  PL  A +G+H      L
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEAL 121

Query: 214 IYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTP 263
           +  GA +        T + +A   G+ +V + + +         L    P
Sbjct: 122 LARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  181 bits (463), Expect = 3e-53
 Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 9/176 (5%)

Query: 130 TPLHVACKWGKVAMVELLISKGAN-IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALY 188
             +H     G++  ++  + KG N +      G TPL  A+  G    +  L+E GA  +
Sbjct: 4   LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH 63

Query: 189 SKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLD 248
              K   + L +AS G +     +L+     ++    +  T L  A    HV+  + LL 
Sbjct: 64  ILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLA 123

Query: 249 RKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTP 304
           R AD    A +G+TP+ +A            +  V + + +         L    P
Sbjct: 124 RGADLTTEADSGYTPMDLAVAL--------GYRKVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  173 bits (442), Expect = 2e-50
 Identities = 44/190 (23%), Positives = 72/190 (37%), Gaps = 25/190 (13%)

Query: 367 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRG 426
               +H  A   + D ++  LR G ++  +  E                          G
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDER-------------------------G 36

Query: 427 ETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVD 486
            TPL  A+   + + VR LL  GA     A+E ++ L +AS  G  DI  LLL+    ++
Sbjct: 37  FTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDIN 96

Query: 487 APTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
               +G T L  + +    +    L   GA +T     G+TP+ LA   G  K+ Q++  
Sbjct: 97  IYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIEN 156

Query: 547 KDAPVDSQGK 556
               +     
Sbjct: 157 HILKLFQSNL 166

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  173 bits (441), Expect = 3e-50
 Identities = 40/176 (22%), Positives = 63/176 (35%), Gaps = 9/176 (5%)

Query: 229 TALHVASHCGHVRVAKTLLDRKAD-PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTL 287
            ++H  +  G +   K  L +  +  N     GFTPL  A             +   + L
Sbjct: 4   LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFG--------EIETVRFL 55

Query: 288 LDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCM 347
           L+  ADP+  A    + L +A       +V LLL+    I     +G TPL  A     +
Sbjct: 56  LEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHV 115

Query: 348 NIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTP 403
                LL  GA   T    G TP+ LA       + +++  +   +         P
Sbjct: 116 KCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  172 bits (440), Expect = 4e-50
 Identities = 35/165 (21%), Positives = 63/165 (38%), Gaps = 1/165 (0%)

Query: 641 GYTPLHIAAKKNQMDIATTLLEYNA-KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT 699
               +H  A + ++D     L       N   + GFTPL  ++  G  +    L+E GA 
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 700 VSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
               AK   + L L +     ++  + +    +I+     G TPL  A     +  V  L
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEAL 121

Query: 760 VENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           +  GA++    + GYTP+  A   G   +  ++     +   +  
Sbjct: 122 LARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNL 166

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  161 bits (410), Expect = 5e-46
 Identities = 41/204 (20%), Positives = 63/204 (30%), Gaps = 35/204 (17%)

Query: 260 GFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKAD-PNARALNGFTPLHIACKKNRYKVVE 318
               +H    +          +   K  L +  +  N     GFTPL  A      + V 
Sbjct: 2   DSLSIHQLAAQG--------ELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVR 53

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN 378
            LL++GA      +   + L +AS  G  +I   LL+     +     G TPL  A R N
Sbjct: 54  FLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGN 113

Query: 379 QTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQ 438
               V  LL  GA +   A                            G TP+ LA     
Sbjct: 114 HVKCVEALLARGADLTTEADS--------------------------GYTPMDLAVALGY 147

Query: 439 TDIVRILLRNGASVDARAREDQTP 462
             + +++  +   +         P
Sbjct: 148 RKVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  148 bits (377), Expect = 2e-41
 Identities = 33/201 (16%), Positives = 65/201 (32%), Gaps = 45/201 (22%)

Query: 2   QQGHDRVVAVLLEN-----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLS 56
            QG    +   L       +   +     L  A+                          
Sbjct: 11  AQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAF------------------------ 46

Query: 57  NTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLS 116
                           G+ E  + L++ GA  ++ +    + L +A+   +  +V  LL 
Sbjct: 47  ----------------GEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLE 90

Query: 117 KGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNV 176
           +  +  +   +  TPL  A +   V  VE L+++GA++  +   G TP+  A   G+  V
Sbjct: 91  RDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKV 150

Query: 177 IDILIEKGAALYSKTKNGLAP 197
             ++      L+        P
Sbjct: 151 QQVIENHILKLFQSNLVPADP 171

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  189 bits (483), Expect = 7e-55
 Identities = 68/320 (21%), Positives = 101/320 (31%), Gaps = 78/320 (24%)

Query: 292 ADPNARALNGFTPLHIACKKNRYKVVELLLKY-------GASIAAT-TESGLTPLHVASF 343
           A      L     +  A  ++  + +E LL +                E+G T L  A  
Sbjct: 4   AGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAML 63

Query: 344 ---MGCMNIAIFLLQAGAAPDTAT-----------VRGETPLHLAARANQTDIVRILLRN 389
               G  +    LL      D+              +G+T LH+A       +V +L+ N
Sbjct: 64  NLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN 123

Query: 390 GASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNG 449
           GA V A A  D            F            GE PL LAA  NQ  IV+ LL+N 
Sbjct: 124 GADVQAAANGDFFKKTKGRPGFYF------------GELPLSLAACTNQLAIVKFLLQNS 171

Query: 450 ---ASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDE 506
              A + AR     T LH    + +  + +                 T    S       
Sbjct: 172 WQPADISARDSVGNTVLHALVEVADNTVDN-----------------TKFVTSMYNEILI 214

Query: 507 VASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGA 566
           + + L  +      T +KG TPL LAA  G++ +   +LQ++                  
Sbjct: 215 LGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREI----------------- 257

Query: 567 SITATTKKGFTPLHLAAKYG 586
                        H AA + 
Sbjct: 258 -------HEPECRHAAAHHH 270

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  164 bits (418), Expect = 5e-46
 Identities = 57/362 (15%), Positives = 89/362 (24%), Gaps = 99/362 (27%)

Query: 149 SKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEA 208
           S  A  +         +  A    +   ++ L+                           
Sbjct: 1   SVSAGEKPPRLYDRRSIFDAVAQSNCQELESLLP-------------------------- 34

Query: 209 ATRVLIYHGAGVDEITVDY-LTALHVAS---HCGHVRVAKTLLDRKADPNARALNGFTPL 264
             +         +    +   T L  A    H G       LLD     ++         
Sbjct: 35  FLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFV---- 90

Query: 265 HIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYG 324
                                      A        G T LHIA ++    +V LL++ G
Sbjct: 91  --------------------------NASYTDSYYKGQTALHIAIERRNMTLVTLLVENG 124

Query: 325 ASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVR 384
           A + A                                     GE PL LAA  NQ  IV+
Sbjct: 125 ADVQAAANGDFFKKT-------------------KGRPGFYFGELPLSLAACTNQLAIVK 165

Query: 385 ILLRNG---ASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDI 441
            LL+N    A + AR     T LH    +   +             T    +       +
Sbjct: 166 FLLQNSWQPADISARDSVGNTVLHALVEVADNT----------VDNTKFVTSMYNEILIL 215

Query: 442 VRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAK 501
              L       +   R+  TPL +A+  G   + + +LQ                H +A 
Sbjct: 216 GAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREI-------HEPECRHAAAH 268

Query: 502 EG 503
             
Sbjct: 269 HH 270

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  163 bits (415), Expect = 2e-45
 Identities = 51/298 (17%), Positives = 89/298 (29%), Gaps = 52/298 (17%)

Query: 449 GASVDARAREDQTPLHVASRLGNGDIASLLLQ-------HGASVDAP-TKDGYTALH--- 497
            A        D+  +  A    N      LL             +    + G T L    
Sbjct: 3   SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAM 62

Query: 498 ISAKEGQDEVASILTESGASITATTK-----------KGFTPLHLAAKYGRMKIAQMLLQ 546
           ++   GQ++  ++L +      +  +           KG T LH+A +   M +  +L++
Sbjct: 63  LNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVE 122

Query: 547 KDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK---DAPVDS 603
             A V +                     G  PL LAA   ++ I + LLQ     A + +
Sbjct: 123 NGADVQAAANGDF---FKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA 179

Query: 604 QGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEY 663
           +   G T LH         V                + Y  + I   K        L   
Sbjct: 180 RDSVGNTVLHALVEVADNTVDNTKF---------VTSMYNEILILGAK--------LHPT 222

Query: 664 NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVN 721
                  ++ G TPL L+A  G   + + +++          +     H  A     +
Sbjct: 223 LKLEEITNRKGLTPLALAASSGKIGVLAYILQREI-------HEPECRHAAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  156 bits (397), Expect = 4e-43
 Identities = 45/277 (16%), Positives = 80/277 (28%), Gaps = 54/277 (19%)

Query: 116 SKGGNQTLATEHNITPLHVACKWGKVAMVELL-------ISKGANIEAKTRD-GLTPLHC 167
           S    +     ++   +  A        +E L         +  + E K  + G T L  
Sbjct: 1   SVSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLK 60

Query: 168 A---ARSGHDNVIDILIEKGAALY-----------SKTKNGLAPLHMASQGDHEAATRVL 213
           A     +G ++ I +L++                      G   LH+A +  +     +L
Sbjct: 61  AMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLL 120

Query: 214 IYHGAGVDEITVDYL--------------TALHVASHCGHVRVAKTLLDR---KADPNAR 256
           + +GA V                        L +A+    + + K LL      AD +AR
Sbjct: 121 VENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISAR 180

Query: 257 ALNGFTPLHIACKKNR--------YKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIA 308
              G T LH   +             S +   + +   L             G TPL +A
Sbjct: 181 DSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240

Query: 309 CKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMG 345
               +  V+  +L+                H A+   
Sbjct: 241 ASSGKIGVLAYILQREI-------HEPECRHAAAHHH 270

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  148 bits (376), Expect = 3e-40
 Identities = 49/272 (18%), Positives = 80/272 (29%), Gaps = 56/272 (20%)

Query: 565 GASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG--------KNGVTPLHVAS 616
            A            +  A      +  + LL        +         + G T L  A 
Sbjct: 3   SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAM 62

Query: 617 ---HYDHQNVALLLLDRGASPHAVAK-----------NGYTPLHIAAKKNQMDIATTLLE 662
              H    +   LLLD      ++ +            G T LHIA ++  M + T L+E
Sbjct: 63  LNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVE 122

Query: 663 YNAKPNAESKAGF--------------TPLHLSAQEGHTDMSSLLIEHG---ATVSHQAK 705
             A   A +   F               PL L+A      +   L+++    A +S +  
Sbjct: 123 NGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDS 182

Query: 706 NGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN 765
            G T LH   +     V                   T    + +   L +   L      
Sbjct: 183 VGNTVLHALVEVADNTVDN-----------------TKFVTSMYNEILILGAKLHPTLKL 225

Query: 766 VNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
              T   G TPL  A+  G++ ++  +L    
Sbjct: 226 EEITNRKGLTPLALAASSGKIGVLAYILQREI 257

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  142 bits (360), Expect = 4e-38
 Identities = 42/320 (13%), Positives = 79/320 (24%), Gaps = 97/320 (30%)

Query: 25  ALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDN 84
           ++  A  + +C+    LL                                    +     
Sbjct: 16  SIFDAVAQSNCQELESLL---------------------------------PFLQRSKKR 42

Query: 85  GATINVQSL-NGFTPLYMA---AQENHDGVVRYLLSKGGNQTLATEHNI----------- 129
                 +    G T L  A        +  +  LL          +              
Sbjct: 43  LTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQ 102

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRD--------------GLTPLHCAARSGHDN 175
           T LH+A +   + +V LL+  GA+++A                  G  PL  AA +    
Sbjct: 103 TALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLA 162

Query: 176 VIDILIEKG---AALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALH 232
           ++  L++     A + ++   G   LH   +                         T   
Sbjct: 163 IVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDN-----------------TKFV 205

Query: 233 VASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKA 292
            + +   + +   L             G TPL +A             + V   +L R+ 
Sbjct: 206 TSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS--------GKIGVLAYILQREI 257

Query: 293 DPNARALNGFTPLHIACKKN 312
                  +     H A   +
Sbjct: 258 -------HEPECRHAAAHHH 270

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  115 bits (289), Expect = 1e-28
 Identities = 35/168 (20%), Positives = 58/168 (34%), Gaps = 40/168 (23%)

Query: 73  GQEEVAKILVDNGATINVQSLNGF--------------TPLYMAAQENHDGVVRYLLSKG 118
               +  +LV+NGA +   +   F               PL +AA  N   +V++LL   
Sbjct: 112 RNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNS 171

Query: 119 G---NQTLATEHNITPLHVACKWGK---------VAMVELLISKGANI-------EAKTR 159
               + +       T LH   +             +M   ++  GA +       E   R
Sbjct: 172 WQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNR 231

Query: 160 DGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHE 207
            GLTPL  AA SG   V+  ++++         +     H A+   H 
Sbjct: 232 KGLTPLALAASSGKIGVLAYILQREI-------HEPECRHAAAHHHHH 272

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  100 bits (251), Expect = 1e-23
 Identities = 39/194 (20%), Positives = 59/194 (30%), Gaps = 47/194 (24%)

Query: 631 GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEY-------NAKPNA-ESKAGFTPLH--- 679
            A            +  A  ++      +LL +              + + G T L    
Sbjct: 3   SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAM 62

Query: 680 LSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKA 739
           L+   G  D  +LL++                            ++  F  A        
Sbjct: 63  LNLHNGQNDTIALLLDVAR----------------------KTDSLKQFVNASYTDSYYK 100

Query: 740 GFTPLHIASHFGQLNMVRYLVENGANVNATTN--------------LGYTPLHQASQQGR 785
           G T LHIA     + +V  LVENGA+V A  N               G  PL  A+   +
Sbjct: 101 GQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQ 160

Query: 786 VLIIDLLLGAGAQP 799
           + I+  LL    QP
Sbjct: 161 LAIVKFLLQNSWQP 174

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  188 bits (479), Expect = 1e-54
 Identities = 49/296 (16%), Positives = 84/296 (28%), Gaps = 54/296 (18%)

Query: 492 GYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPV 551
           G     I ++   +                   G     +  K G            A V
Sbjct: 1   GEVNKIIGSRTAGE-------------------GAMEYLIEWKDGHSPSWVPSSYIAADV 41

Query: 552 DSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTP 611
            S+ +                    TP   AA+    +    LL+ D  VD+  +NG T 
Sbjct: 42  VSEYE--------------------TPWWTAARKADEQALSQLLE-DRDVDAVDENGRTA 80

Query: 612 LHVASHYDHQNVALLLLDRGASPHAV-AKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE 670
           L   +         LL + GA       + G T LH+AA   + ++   L+E  A    E
Sbjct: 81  LLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVE 140

Query: 671 SKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNG 730
            + G T L L+ +   T      ++ G  +  +    +  +      +   V  I    G
Sbjct: 141 DERGLTALELAREILKTTPKGNPMQFGRRIGLEK---VINVLEGQVFEYAEVDEIVEKRG 197

Query: 731 AEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRV 786
                    G    ++       +       + A   A        L  A  +  +
Sbjct: 198 --------KGKDVEYLVRWKDGGDCEWVKGVHVAEDVAKDY--EDGLEYAVAESVI 243

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  187 bits (478), Expect = 2e-54
 Identities = 57/276 (20%), Positives = 96/276 (34%), Gaps = 49/276 (17%)

Query: 426 GETPLHLAARAN--------------QTDIVRILLRNGASVDARAREDQTPLHVASRLGN 471
           GE    + +R                 +          A V +   E +TP   A+R  +
Sbjct: 1   GEVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS---EYETPWWTAARKAD 57

Query: 472 GDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKK-GFTPLH 530
               S LL     VDA  ++G TAL   A  G D+   +L E+GA +     + G T LH
Sbjct: 58  EQALSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALH 116

Query: 531 LAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKI 590
           +AA Y R ++ + L++                  GA I    ++G T L LA +  +   
Sbjct: 117 MAAGYVRPEVVEALVEL-----------------GADIEVEDERGLTALELAREILKTTP 159

Query: 591 AQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAK 650
               +Q    +  +    V  +     +++  V  ++  RG         G    ++   
Sbjct: 160 KGNPMQFGRRIGLE---KVINVLEGQVFEYAEVDEIVEKRGK--------GKDVEYLVRW 208

Query: 651 KNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGH 686
           K+  D       + A+  A  K     L  +  E  
Sbjct: 209 KDGGDCEWVKGVHVAEDVA--KDYEDGLEYAVAESV 242

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  184 bits (470), Expect = 2e-53
 Identities = 45/314 (14%), Positives = 85/314 (27%), Gaps = 78/314 (24%)

Query: 95  GFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANI 154
           G     + ++   +G                        +  K G            A++
Sbjct: 1   GEVNKIIGSRTAGEGA-------------------MEYLIEWKDGHSPSWVPSSYIAADV 41

Query: 155 EAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLI 214
            ++     TP   AAR   +  +  L+                                 
Sbjct: 42  VSE---YETPWWTAARKADEQALSQLL--------------------------------- 65

Query: 215 YHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNAR-ALNGFTPLHIACKKNRY 273
                VD +  +  TAL   +  G  +  + L +  AD + R    G T LH+A      
Sbjct: 66  -EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV-- 122

Query: 274 KSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTES 333
                    V + L++  AD       G T L +A +  +       +++G  I      
Sbjct: 123 ------RPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLE--- 173

Query: 334 GLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASV 393
            +  +          +   + + G         G+   +L    +  D   +   + A  
Sbjct: 174 KVINVLEGQVFEYAEVDEIVEKRGK--------GKDVEYLVRWKDGGDCEWVKGVHVAED 225

Query: 394 DARAREDQTPLHVA 407
            A+  E    L  A
Sbjct: 226 VAKDYE--DGLEYA 237

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  172 bits (437), Expect = 7e-49
 Identities = 47/294 (15%), Positives = 73/294 (24%), Gaps = 59/294 (20%)

Query: 295 NARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLL 354
           +  A  G     I  K              A + +      TP   A+          LL
Sbjct: 9   SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSE---YETPWWTAARKADEQALSQLL 65

Query: 355 QAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFS 414
           +     D     G T L   A       VR+L   GA +D R                  
Sbjct: 66  E-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG-------------- 110

Query: 415 SASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDI 474
                      G T LH+AA   + ++V  L+  GA ++       T L +A  +     
Sbjct: 111 -----------GLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTP 159

Query: 475 ASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAK 534
               +Q G  +     +    +         EV  I+ + G         G    +L   
Sbjct: 160 KGNPMQFGRRIGL---EKVINVLEGQVFEYAEVDEIVEKRGK--------GKDVEYLVRW 208

Query: 535 YGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRM 588
                   +                      A   A   +    L  A     +
Sbjct: 209 KDGGDCEWVKGVH-----------------VAEDVAKDYE--DGLEYAVAESVI 243

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  163 bits (415), Expect = 9e-46
 Identities = 48/248 (19%), Positives = 79/248 (31%), Gaps = 22/248 (8%)

Query: 555 GKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHV 614
           G+V  I+       + T  +G     +  K G            A V S+ +   TP   
Sbjct: 1   GEVNKII------GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE---TPWWT 51

Query: 615 ASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNA-ESKA 673
           A+    +     LL+      AV +NG T L   A          L E  A  +  + + 
Sbjct: 52  AARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG 110

Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEI 733
           G T LH++A     ++   L+E GA +  + + GLT L L  +  K       M  G  I
Sbjct: 111 GLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRI 170

Query: 734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
                     +     F    +   + + G         G    +    +       +  
Sbjct: 171 G---LEKVINVLEGQVFEYAEVDEIVEKRGK--------GKDVEYLVRWKDGGDCEWVKG 219

Query: 794 GAGAQPNA 801
              A+  A
Sbjct: 220 VHVAEDVA 227

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  160 bits (407), Expect = 1e-44
 Identities = 43/256 (16%), Positives = 83/256 (32%), Gaps = 25/256 (9%)

Query: 25  ALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFE-------ATGQEEV 77
              I ++     A   L+E    ++   V  S    +V    +++E           E+ 
Sbjct: 4   NKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADV---VSEYETPWWTAARKADEQA 60

Query: 78  AKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLA-TEHNITPLHVAC 136
              L++    ++    NG T L   A    D  VR L   G +         +T LH+A 
Sbjct: 61  LSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 119

Query: 137 KWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLA 196
            + +  +VE L+  GA+IE +   GLT L  A            ++ G  +  +    + 
Sbjct: 120 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLE---KVI 176

Query: 197 PLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNAR 256
            +      ++     ++   G G            ++                 A+  A+
Sbjct: 177 NVLEGQVFEYAEVDEIVEKRGKGK--------DVEYLVRWKDGGDCEWVKGVHVAEDVAK 228

Query: 257 ALNGFTPLHIACKKNR 272
             +    L  A  ++ 
Sbjct: 229 --DYEDGLEYAVAESV 242

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  149 bits (378), Expect = 8e-41
 Identities = 45/247 (18%), Positives = 69/247 (27%), Gaps = 57/247 (23%)

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
           G     + ++                       G     +     H    +      A  
Sbjct: 1   GEVNKIIGSR-------------------TAGEGAMEYLIEWKDGHSPSWVPSSYIAAD- 40

Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
             V     TP   AA+K      + LLE +   +A  + G T L   A  G      LL 
Sbjct: 41  --VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLA 97

Query: 695 EHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLN 754
           E GA + H+   G                                G T LH+A+ + +  
Sbjct: 98  EAGADLDHRDMRG--------------------------------GLTALHMAAGYVRPE 125

Query: 755 MVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA--TTNLFCCATIL 812
           +V  LVE GA++      G T L  A +  +       +  G +       N+       
Sbjct: 126 VVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185

Query: 813 VKNGAEI 819
                EI
Sbjct: 186 YAEVDEI 192

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  133 bits (337), Expect = 3e-35
 Identities = 44/252 (17%), Positives = 83/252 (32%), Gaps = 45/252 (17%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
           + GH               ++ +        AA+K D +A + LLE    +         
Sbjct: 24  KDGHSPSWVPSSYIAADVVSEYET---PWWTAARKADEQALSQLLEDRDVDAV------- 73

Query: 58  TKLEVSLSNTKFEAT--------GQEEVAKILVDNGATINVQ-SLNGFTPLYMAAQENHD 108
                     +   T        G ++  ++L + GA ++ +    G T L+MAA     
Sbjct: 74  ---------DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRP 124

Query: 109 GVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCA 168
            VV  L+  G +  +  E  +T L +A +  K       +  G  I  +    +  +   
Sbjct: 125 EVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLE---KVINVLEG 181

Query: 169 ARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYL 228
               +  V +I+ ++G         G    ++    D      V   H A  +++  DY 
Sbjct: 182 QVFEYAEVDEIVEKRGK--------GKDVEYLVRWKDGGDCEWVKGVHVA--EDVAKDYE 231

Query: 229 TALHVASHCGHV 240
             L  A     +
Sbjct: 232 DGLEYAVAESVI 243

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  185 bits (472), Expect = 1e-54
 Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 17/181 (9%)

Query: 525 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK 584
               +H  A  G M      +++                    I  T ++GFTPL  AA 
Sbjct: 3   NSLSVHQLAAQGEMLYLATRIEQ-----------------ENVINHTDEEGFTPLMWAAA 45

Query: 585 YGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTP 644
           +G++ + + LLQ  A     GK   + L +A    + ++  +LLD G   +    NG TP
Sbjct: 46  HGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTP 105

Query: 645 LHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA 704
           L  A   N +     LLE  A P  E+ +G+  + L+   G+  +  ++  H   +    
Sbjct: 106 LLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNI 165

Query: 705 K 705
           K
Sbjct: 166 K 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  179 bits (458), Expect = 1e-52
 Identities = 36/197 (18%), Positives = 65/197 (32%), Gaps = 33/197 (16%)

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
               +H  A  G M      ++++  ++   + G TPL  A+ +    V   LL  GA P
Sbjct: 3   NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP 62

Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
             + K   + L +A  K   DI   LL+     N     G TPL  +    H     +L+
Sbjct: 63  QLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLL 122

Query: 695 EHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLN 754
           E GA  + +  +                                 G+  + +A   G  +
Sbjct: 123 ESGADPTIETDS---------------------------------GYNSMDLAVALGYRS 149

Query: 755 MVRYLVENGANVNATTN 771
           + + +  +   +     
Sbjct: 150 VQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  179 bits (458), Expect = 1e-52
 Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 8/171 (4%)

Query: 127 HNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAA 186
            N   +H     G++  +   I +   I     +G TPL  AA  G   V++ L++ GA 
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 187 LYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTL 246
                K   + L +A    +    ++L+  G  V+E   +  T L  A H  HV+  K L
Sbjct: 62  PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKML 121

Query: 247 LDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNAR 297
           L+  ADP     +G+  + +A            +  V + +          
Sbjct: 122 LESGADPTIETDSGYNSMDLAVAL--------GYRSVQQVIESHLLKLLQN 164

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  179 bits (457), Expect = 1e-52
 Identities = 38/198 (19%), Positives = 69/198 (34%), Gaps = 33/198 (16%)

Query: 607 NGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK 666
                +H  +           +++    +   + G+TPL  AA   Q+ +   LL+  A 
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 667 PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATIT 726
           P    K   + L L+  +G+TD+  +L++ G  V+    N                    
Sbjct: 62  PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWN-------------------- 101

Query: 727 MFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRV 786
                        G TPL  A H   +  V+ L+E+GA+    T+ GY  +  A   G  
Sbjct: 102 -------------GGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYR 148

Query: 787 LIIDLLLGAGAQPNATTN 804
            +  ++     +      
Sbjct: 149 SVQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  179 bits (457), Expect = 2e-52
 Identities = 32/163 (19%), Positives = 64/163 (39%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN 153
                ++  A +     +   + +        E   TPL  A   G++A+VE L+  GA+
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 154 IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVL 213
            +   +   + L  A   G+ +++ +L++ G  +     NG  PL  A  G+H    ++L
Sbjct: 62  PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKML 121

Query: 214 IYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNAR 256
           +  GA     T     ++ +A   G+  V + +          
Sbjct: 122 LESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQN 164

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  178 bits (454), Expect = 4e-52
 Identities = 38/182 (20%), Positives = 65/182 (35%), Gaps = 17/182 (9%)

Query: 425 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGAS 484
                +H  A   +   +   +     ++    E  TPL  A+  G   +   LLQ+GA 
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
                K   +AL ++  +G  ++  +L + G  +      G TPL  A     +K  +ML
Sbjct: 62  PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKML 121

Query: 545 LQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQ 604
           L+                  GA  T  T  G+  + LA   G   + Q++      +   
Sbjct: 122 LES-----------------GADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQN 164

Query: 605 GK 606
            K
Sbjct: 165 IK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  176 bits (450), Expect = 1e-51
 Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 8/171 (4%)

Query: 229 TALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLL 288
            ++H  +  G +    T ++++   N     GFTPL  A             + V + LL
Sbjct: 5   LSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHG--------QIAVVEFLL 56

Query: 289 DRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMN 348
              ADP        + L +AC K    +V++LL  G  +     +G TPL  A     + 
Sbjct: 57  QNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVK 116

Query: 349 IAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARARE 399
               LL++GA P   T  G   + LA       + +++  +   +    +E
Sbjct: 117 CVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIKE 167

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  173 bits (441), Expect = 3e-50
 Identities = 38/150 (25%), Positives = 66/150 (44%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G+       ++    IN     GFTPL  AA      VV +LL  G +  L  +   + L
Sbjct: 14  GEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESAL 73

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
            +AC  G   +V++L+  G ++     +G TPL  A    H   + +L+E GA    +T 
Sbjct: 74  SLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETD 133

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDE 222
           +G   + +A    + +  +V+  H   + +
Sbjct: 134 SGYNSMDLAVALGYRSVQQVIESHLLKLLQ 163

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  168 bits (428), Expect = 1e-48
 Identities = 42/192 (21%), Positives = 66/192 (34%), Gaps = 26/192 (13%)

Query: 333 SGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGAS 392
           +    +H  +  G M      ++     +     G TPL  AA   Q  +V  LL+NGA 
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 393 VDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASV 452
                +                            E+ L LA     TDIV++LL  G  V
Sbjct: 62  PQLLGKG--------------------------RESALSLACSKGYTDIVKMLLDCGVDV 95

Query: 453 DARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILT 512
           +       TPL  A    +     +LL+ GA     T  GY ++ ++   G   V  ++ 
Sbjct: 96  NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIE 155

Query: 513 ESGASITATTKK 524
                +    K+
Sbjct: 156 SHLLKLLQNIKE 167

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  165 bits (420), Expect = 2e-47
 Identities = 38/200 (19%), Positives = 63/200 (31%), Gaps = 34/200 (17%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
                +H    +          +    T ++++   N     GFTPL  A    +  VVE
Sbjct: 2   ANSLSVHQLAAQG--------EMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVE 53

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN 378
            LL+ GA      +   + L +A   G  +I   LL  G   +     G TPL  A   N
Sbjct: 54  FLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGN 113

Query: 379 QTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQ 438
               V++LL +GA                                  G   + LA     
Sbjct: 114 HVKCVKMLLESGADPTIETDS--------------------------GYNSMDLAVALGY 147

Query: 439 TDIVRILLRNGASVDARARE 458
             + +++  +   +    +E
Sbjct: 148 RSVQQVIESHLLKLLQNIKE 167

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  147 bits (373), Expect = 4e-41
 Identities = 38/198 (19%), Positives = 66/198 (33%), Gaps = 46/198 (23%)

Query: 640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT 699
                +H  A + +M    T +E     N   + GFTPL  +A  G   +   L+++GA 
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 700 VSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
                K                                    + L +A   G  ++V+ L
Sbjct: 62  PQLLGKGR---------------------------------ESALSLACSKGYTDIVKML 88

Query: 760 VENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN-----LFC------- 807
           ++ G +VN     G TPL  A     V  + +LL +GA P   T+     +         
Sbjct: 89  LDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYR 148

Query: 808 -CATILVKNGAEIDPVTK 824
               ++  +  ++    K
Sbjct: 149 SVQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  144 bits (366), Expect = 5e-40
 Identities = 36/195 (18%), Positives = 61/195 (31%), Gaps = 44/195 (22%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
            QG    +A  +E     +   +     L  AA                           
Sbjct: 12  AQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAH------------------------- 46

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                          GQ  V + L+ NGA   +      + L +A  + +  +V+ LL  
Sbjct: 47  ---------------GQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDC 91

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI 177
           G +      +  TPL  A     V  V++L+  GA+   +T  G   +  A   G+ +V 
Sbjct: 92  GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQ 151

Query: 178 DILIEKGAALYSKTK 192
            ++      L    K
Sbjct: 152 QVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  113 bits (285), Expect = 4e-29
 Identities = 35/163 (21%), Positives = 57/163 (34%), Gaps = 44/163 (26%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
             G   VV  LL+N       GK +  AL +A  K                         
Sbjct: 45  AHGQIAVVEFLLQNGADPQLLGKGRESALSLACSK------------------------- 79

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                          G  ++ K+L+D G  +N    NG TPL  A   NH   V+ LL  
Sbjct: 80  ---------------GYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES 124

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRD 160
           G + T+ T+     + +A   G  ++ +++ S    +    ++
Sbjct: 125 GADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIKE 167

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  187 bits (476), Expect = 3e-54
 Identities = 63/276 (22%), Positives = 96/276 (34%), Gaps = 55/276 (19%)

Query: 303 TPLHIACKKNRYKVVELLLKY--------GASIAATTESGLTPLHVASFM---GCMNIAI 351
             L     +   + +  LL+Y          S      +G T L  A      G     +
Sbjct: 4   DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIM 63

Query: 352 FLLQAGAAPDTATV-----------RGETPLHLAARANQTDIVRILLRNGASVDARARED 400
            LLQ                     +G + LH+A        V++L+ NGA V  RA   
Sbjct: 64  PLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGR 123

Query: 401 QTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNG---ASVDARAR 457
               H  +                 GE PL LAA   Q D+V  LL N    AS++A   
Sbjct: 124 FFQKHQGT-------------CFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDS 170

Query: 458 EDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGAS 517
              T LH                    + A      +AL I   +G  ++ + L  +   
Sbjct: 171 LGNTVLHALV-----------------MIADNSPENSALVIHMYDGLLQMGARLCPTVQL 213

Query: 518 ITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS 553
              +  +G TPL LAAK G+++I + +LQ++    +
Sbjct: 214 EEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAA 249

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  163 bits (415), Expect = 9e-46
 Identities = 57/315 (18%), Positives = 82/315 (26%), Gaps = 90/315 (28%)

Query: 229 TALHVASHCGHVRVAKTLLD--------RKADPNARALNGFTPLHIACKKNRYKSSHCNH 280
             L      G       LL+                   G T L  A       +     
Sbjct: 4   DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVL-----NLQDGV 58

Query: 281 VWVAKTLLDRKADP-----------NARALNGFTPLHIACKKNRYKVVELLLKYGASIAA 329
                 LL    D                  G + LHIA +K   + V+LL++ GA +  
Sbjct: 59  NACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118

Query: 330 TTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRN 389
                    H                      T    GE PL LAA   Q D+V  LL N
Sbjct: 119 RACGRFFQKH--------------------QGTCFYFGELPLSLAACTKQWDVVTYLLEN 158

Query: 390 G---ASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILL 446
               AS++A      T LH                                         
Sbjct: 159 PHQPASLEATDSLGNTVLHALV-------------------------------------- 180

Query: 447 RNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDE 506
                + A    + + L +    G   + + L       +     G T L ++AKEG+ E
Sbjct: 181 -----MIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIE 235

Query: 507 VASILTESGASITAT 521
           +   + +   S  A 
Sbjct: 236 IFRHILQREFSGAAA 250

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  162 bits (411), Expect = 3e-45
 Identities = 49/266 (18%), Positives = 78/266 (29%), Gaps = 55/266 (20%)

Query: 577 TPLHLAAKYGRMKIAQMLLQK--------DAPVDSQGKNGVTPLHVA---SHYDHQNVAL 625
             L      G  +    LL+              ++G  G T L  A            +
Sbjct: 4   DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIM 63

Query: 626 LLLDRG-----------ASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNA----- 669
            LL              A        G++ LHIA +K  +     L+E  A  +      
Sbjct: 64  PLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGR 123

Query: 670 --------ESKAGFTPLHLSAQEGHTDMSSLLIEHG---ATVSHQAKNGLTPLHLCAQED 718
                       G  PL L+A     D+ + L+E+    A++      G T LH      
Sbjct: 124 FFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIA 183

Query: 719 KVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLH 778
                                  + L I  + G L M   L         + + G TPL 
Sbjct: 184 D-----------------NSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLK 226

Query: 779 QASQQGRVLIIDLLLGAGAQPNATTN 804
            A+++G++ I   +L       A  +
Sbjct: 227 LAAKEGKIEIFRHILQREFSGAAAHH 252

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  156 bits (396), Expect = 4e-43
 Identities = 45/265 (16%), Positives = 84/265 (31%), Gaps = 46/265 (17%)

Query: 459 DQTPLHVASRLGNGDIASLLLQH--------GASVDAPTKDGYTALHISA---KEGQDEV 507
           D+  L      G  +  + LL++          S       G T L  +    ++G +  
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 508 ASILTESG-----------ASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGK 556
              L +             A  T    +G + LH+A +   ++  ++L++  A V  +  
Sbjct: 62  IMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRAC 121

Query: 557 VASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK---DAPVDSQGKNGVTPLH 613
                   G         G  PL LAA   +  +   LL+     A +++    G T LH
Sbjct: 122 GRFFQKHQG----TCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLH 177

Query: 614 VASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKA 673
                   +                    + L I      + +   L          +  
Sbjct: 178 ALVMIADNS-----------------PENSALVIHMYDGLLQMGARLCPTVQLEEISNHQ 220

Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGA 698
           G TPL L+A+EG  ++   +++   
Sbjct: 221 GLTPLKLAAKEGKIEIFRHILQREF 245

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  142 bits (360), Expect = 2e-38
 Identities = 43/252 (17%), Positives = 77/252 (30%), Gaps = 55/252 (21%)

Query: 75  EEVAKILVDNGATINVQSLNGFTPLYMAAQENHDG---VVRYLLSKGGNQTLATEHN--- 128
           E +         +   +   G T L  A     DG    +  LL    +           
Sbjct: 23  EYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQ 82

Query: 129 --------ITPLHVACKWGKVAMVELLISKGANIEAKTR-------------DGLTPLHC 167
                    + LH+A +   +  V+LL+  GA++  +                G  PL  
Sbjct: 83  CTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSL 142

Query: 168 AARSGHDNVIDILIEKG---AALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEIT 224
           AA +   +V+  L+E     A+L +    G   LH        +                
Sbjct: 143 AACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPEN------------- 189

Query: 225 VDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVA 284
               +AL +  + G +++   L             G TPL +A K+          + + 
Sbjct: 190 ----SALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKE--------GKIEIF 237

Query: 285 KTLLDRKADPNA 296
           + +L R+    A
Sbjct: 238 RHILQREFSGAA 249

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  134 bits (338), Expect = 2e-35
 Identities = 41/266 (15%), Positives = 77/266 (28%), Gaps = 54/266 (20%)

Query: 24  PALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTK-------LEVSLSNTKFEATGQEE 76
             L     +   +    LLE    N+K     + T+       L  ++ N +    G   
Sbjct: 4   DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQ---DGVNA 60

Query: 77  VAKILVDNG-----------ATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGN----- 120
               L+              A    +   G + L++A ++     V+ L+  G +     
Sbjct: 61  CIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRA 120

Query: 121 --------QTLATEHNITPLHVACKWGKVAMVELLISKG---ANIEAKTRDGLTPLHCAA 169
                   Q         PL +A    +  +V  L+      A++EA    G T LH   
Sbjct: 121 CGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALV 180

Query: 170 RSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLT 229
               ++                    + L +            L       +      LT
Sbjct: 181 MIADNS-----------------PENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLT 223

Query: 230 ALHVASHCGHVRVAKTLLDRKADPNA 255
            L +A+  G + + + +L R+    A
Sbjct: 224 PLKLAAKEGKIEIFRHILQREFSGAA 249

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  107 bits (268), Expect = 5e-26
 Identities = 39/209 (18%), Positives = 62/209 (29%), Gaps = 41/209 (19%)

Query: 2   QQGHDRVVAVLLENDTKGKVKLP---------------ALHIAAKKDDCKAAALLLE--- 43
           Q G +  +  LL+ D       P               ALHIA +K   +   LL+E   
Sbjct: 55  QDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGA 114

Query: 44  -VSFSNTKLEVSLSNTKLEVSLSNTKFEA--TGQEEVAKILVDNG---ATINVQSLNGFT 97
            V                          A  T Q +V   L++N    A++      G T
Sbjct: 115 DVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNT 174

Query: 98  PLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAK 157
            L+       +                     + L +    G + M   L       E  
Sbjct: 175 VLHALVMIADN-----------------SPENSALVIHMYDGLLQMGARLCPTVQLEEIS 217

Query: 158 TRDGLTPLHCAARSGHDNVIDILIEKGAA 186
              GLTPL  AA+ G   +   ++++  +
Sbjct: 218 NHQGLTPLKLAAKEGKIEIFRHILQREFS 246

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  184 bits (469), Expect = 5e-54
 Identities = 47/200 (23%), Positives = 77/200 (38%), Gaps = 24/200 (12%)

Query: 489 TKDGYTALHISAKEGQDEVASILTESGAS-ITATTKKGFTPLHLAAKYGRMKIAQMLLQK 547
           + +    +    +EG      +  ++  + +      GF+PLH A + GR  + +ML+ +
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61

Query: 548 DAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKN 607
                            GA I    +   TPLHLAA +G   I Q LLQ  A +++  ++
Sbjct: 62  -----------------GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEH 104

Query: 608 GVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKP 667
           G  PLH A  +    VA  L+  GA      K G  P+  A    +  +     +     
Sbjct: 105 GNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNL 164

Query: 668 NAESKAGFTPLHLSAQEGHT 687
           N        P   +  +G T
Sbjct: 165 NR------IPYKDTFWKGTT 178

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  182 bits (464), Expect = 2e-53
 Identities = 49/223 (21%), Positives = 75/223 (33%), Gaps = 48/223 (21%)

Query: 124 ATEHNITPLHVACKWGKVAMVELLISKGAN-IEAKTRDGLTPLHCAARSGHDNVIDILIE 182
            +   +  +   C+ G    V L +    N +      G +PLH A R G   V+++LI 
Sbjct: 1   GSPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIM 60

Query: 183 KGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRV 242
           +GA +    +                                    T LH+A+  GH  +
Sbjct: 61  RGARINVMNRGD---------------------------------DTPLHLAASHGHRDI 87

Query: 243 AKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGF 302
            + LL  KAD NA   +G  PLH AC              VA+ L+   A  +     G 
Sbjct: 88  VQKLLQYKADINAVNEHGNVPLHYACFW--------GQDQVAEDLVANGALVSICNKYGE 139

Query: 303 TPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMG 345
            P+  A    R  + E   K G ++         P     + G
Sbjct: 140 MPVDKAKAPLRELLRERAEKMGQNLNR------IPYKDTFWKG 176

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  181 bits (461), Expect = 5e-53
 Identities = 49/214 (22%), Positives = 74/214 (34%), Gaps = 41/214 (19%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKA-DPNARALNGFTPLHIACKKNRYKVV 317
                +   C++         +    +  LD    D N    +GF+PLH AC++ R  VV
Sbjct: 4   EFMDDIFTQCREG--------NAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVV 55

Query: 318 ELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARA 377
           E+L+  GA I        TPLH+A+  G  +I   LLQ  A  +     G  PLH A   
Sbjct: 56  EMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFW 115

Query: 378 NQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARAN 437
            Q  +   L+ NGA V    +                           GE P+  A    
Sbjct: 116 GQDQVAEDLVANGALVSICNKY--------------------------GEMPVDKAKAPL 149

Query: 438 QTDIVRILLRNGASVDARAREDQTPLHVASRLGN 471
           +  +     + G +++        P       G 
Sbjct: 150 RELLRERAEKMGQNLNR------IPYKDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  180 bits (460), Expect = 8e-53
 Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 7/178 (3%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGNQT-LATEHNITPLHVACKWGKVAMVELLISKGA 152
                ++   +E +   VR  L    N      +H  +PLH AC+ G+ A+VE+LI +GA
Sbjct: 4   EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGA 63

Query: 153 NIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRV 212
            I    R   TPLH AA  GH +++  L++  A + +  ++G  PLH A     +     
Sbjct: 64  RINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAED 123

Query: 213 LIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKK 270
           L+ +GA V          +  A       + +       + N        P      K
Sbjct: 124 LVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR------IPYKDTFWK 175

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  177 bits (452), Expect = 9e-52
 Identities = 38/196 (19%), Positives = 74/196 (37%), Gaps = 22/196 (11%)

Query: 522 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHL 581
           + +    +    + G     ++ L                      +      GF+PLH 
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTE----------------NDLNQGDDHGFSPLHW 45

Query: 582 AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNG 641
           A + GR  + +ML+ + A ++   +   TPLH+A+ + H+++   LL   A  +AV ++G
Sbjct: 46  ACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHG 105

Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVS 701
             PLH A    Q  +A  L+   A  +  +K G  P+  +       +     + G  ++
Sbjct: 106 NVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLN 165

Query: 702 HQAKNGLTPLHLCAQE 717
                   P      +
Sbjct: 166 R------IPYKDTFWK 175

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  176 bits (450), Expect = 2e-51
 Identities = 45/215 (20%), Positives = 75/215 (34%), Gaps = 40/215 (18%)

Query: 572 TKKGFTPLHLAAKYGRMKIAQMLLQKDA-PVDSQGKNGVTPLHVASHYDHQNVALLLLDR 630
           + +    +    + G     ++ L      ++    +G +PLH A       V  +L+ R
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61

Query: 631 GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMS 690
           GA  + + +   TPLH+AA     DI   LL+Y A  NA ++ G  PLH +   G   ++
Sbjct: 62  GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVA 121

Query: 691 SLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHF 750
             L+ +GA VS   K                                  G  P+  A   
Sbjct: 122 EDLVANGALVSICNKY---------------------------------GEMPVDKAKAP 148

Query: 751 GQLNMVRYLVENGANVNATTNLGYTPLHQASQQGR 785
            +  +     + G N+N        P      +G 
Sbjct: 149 LRELLRERAEKMGQNLNR------IPYKDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  173 bits (440), Expect = 5e-50
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 1/165 (0%)

Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNA-KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHG 697
                 +    ++         L+      N     GF+PLH + +EG + +  +LI  G
Sbjct: 3   PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRG 62

Query: 698 ATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVR 757
           A ++   +   TPLHL A     ++    +   A+I+ V + G  PLH A  +GQ  +  
Sbjct: 63  ARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAE 122

Query: 758 YLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT 802
            LV NGA V+     G  P+ +A    R L+ +     G   N  
Sbjct: 123 DLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRI 167

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  171 bits (437), Expect = 1e-49
 Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 7/170 (4%)

Query: 73  GQEEVAKILVDNGAT-INVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITP 131
           G     ++ +DN    +N    +GF+PL+ A +E    VV  L+ +G    +    + TP
Sbjct: 16  GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTP 75

Query: 132 LHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKT 191
           LH+A   G   +V+ L+   A+I A    G  PLH A   G D V + L+  GA +    
Sbjct: 76  LHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICN 135

Query: 192 KNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVR 241
           K G  P+  A     E         G  ++                G  R
Sbjct: 136 KYGEMPVDKAKAPLRELLRERAEKMGQNLNR------IPYKDTFWKGTTR 179

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  171 bits (436), Expect = 2e-49
 Identities = 39/196 (19%), Positives = 71/196 (36%), Gaps = 24/196 (12%)

Query: 426 GETPLHLAARANQTDIVRILLRNGAS-VDARAREDQTPLHVASRLGNGDIASLLLQHGAS 484
               +    R      VR+ L N  + ++       +PLH A R G   +  +L+  GA 
Sbjct: 5   FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR 64

Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
           ++   +   T LH++A  G  ++   L +  A I A  + G  PLH A  +G+ ++A+ L
Sbjct: 65  INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDL 124

Query: 545 LQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQ 604
           +                   GA ++   K G  P+  A    R  + +   +    ++  
Sbjct: 125 VAN-----------------GALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR- 166

Query: 605 GKNGVTPLHVASHYDH 620
                 P         
Sbjct: 167 -----IPYKDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  169 bits (432), Expect = 5e-49
 Identities = 49/224 (21%), Positives = 81/224 (36%), Gaps = 50/224 (22%)

Query: 367 GETPLHLAARANQTDIVRILLRNGAS-VDARAREDQTPLHVASRLRRFSSASQSALTRVR 425
               +    R      VR+ L N  + ++                               
Sbjct: 5   FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDH-------------------------- 38

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
           G +PLH A R  ++ +V +L+  GA ++   R D TPLH+A+  G+ DI   LLQ+ A +
Sbjct: 39  GFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI 98

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           +A  + G   LH +   GQD+VA  L  +GA ++   K G  P+  A    R  + +   
Sbjct: 99  NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAE 158

Query: 546 QKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMK 589
           +                  G ++         P       G  +
Sbjct: 159 KM-----------------GQNLNR------IPYKDTFWKGTTR 179

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  162 bits (412), Expect = 3e-46
 Identities = 42/210 (20%), Positives = 71/210 (33%), Gaps = 33/210 (15%)

Query: 331 TESGLTPLHVASFMGCMNIAIFLLQAGAA-PDTATVRGETPLHLAARANQTDIVRILLRN 389
           +   +  +      G        L       +     G +PLH A R  ++ +V +L+  
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61

Query: 390 GASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNG 449
           GA ++   R                            +TPLHLAA     DIV+ LL+  
Sbjct: 62  GARINVMNRG--------------------------DDTPLHLAASHGHRDIVQKLLQYK 95

Query: 450 ASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVAS 509
           A ++A       PLH A   G   +A  L+ +GA V    K G   +  +    ++ +  
Sbjct: 96  ADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRE 155

Query: 510 ILTESGASITATTKKGFTPLHLAAKYGRMK 539
              + G ++         P       G  +
Sbjct: 156 RAEKMGQNLNR------IPYKDTFWKGTTR 179

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  139 bits (354), Expect = 2e-38
 Identities = 45/210 (21%), Positives = 73/210 (34%), Gaps = 57/210 (27%)

Query: 2   QQGHDRVVAVLLEN--------DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEV 53
           ++G+   V + L+N        D  G      LH A ++                     
Sbjct: 14  REGNAVAVRLWLDNTENDLNQGDDHGFS---PLHWACRE--------------------- 49

Query: 54  SLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRY 113
                              G+  V ++L+  GA INV +    TPL++AA   H  +V+ 
Sbjct: 50  -------------------GRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQK 90

Query: 114 LLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGH 173
           LL    +     EH   PLH AC WG+  + E L++ GA +    + G  P+  A     
Sbjct: 91  LLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLR 150

Query: 174 DNVIDILIEKGAALYSKTKNGLAPLHMASQ 203
           + + +   + G  L         P      
Sbjct: 151 ELLRERAEKMGQNLNRI------PYKDTFW 174

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  102 bits (256), Expect = 4e-25
 Identities = 28/176 (15%), Positives = 52/176 (29%), Gaps = 50/176 (28%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
           ++G   VV +L+      +   +     LH+AA                           
Sbjct: 48  REGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH------------------------- 82

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                          G  ++ + L+   A IN  + +G  PL+ A     D V   L++ 
Sbjct: 83  ---------------GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN 127

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGH 173
           G   ++  ++   P+  A    +  + E     G N+         P       G 
Sbjct: 128 GALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR------IPYKDTFWKGT 177

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  185 bits (473), Expect = 8e-54
 Identities = 33/225 (14%), Positives = 70/225 (31%), Gaps = 17/225 (7%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN 153
            G   L    + N        ++ G          +  L  +   G+  +V+ +I +  +
Sbjct: 4   TGQVSLPPGKRTNLRKTGSERIAHGMRVK-FNPLPLALLLDSSLEGEFDLVQRIIYEVDD 62

Query: 154 IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVL 213
                 +G+T LH A  +GH  ++  L++ G  + +   +G  PLH A+  ++    + L
Sbjct: 63  PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFL 122

Query: 214 IYHGAGVDEITVD---YLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKK 270
           +  GA V  +T                G+ + ++ L   +             L     +
Sbjct: 123 VESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQ 182

Query: 271 NRYKSSHCNHVWVAKTLLDRKADPNA--RALNGFTPLHIACKKNR 313
           N             +  +          R          A   ++
Sbjct: 183 N-----------DDELPMKEGDCMTIIHREDEDEIEWWWARLNDK 216

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  177 bits (452), Expect = 5e-51
 Identities = 32/169 (18%), Positives = 57/169 (33%), Gaps = 4/169 (2%)

Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
             G   L    + N     +  + +  +    +      L  S+ EG  D+   +I    
Sbjct: 3   ITGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVD 61

Query: 699 TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY 758
             S     G+T LH         +    +  G  ++     G+TPLH A+    + + ++
Sbjct: 62  DPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKF 121

Query: 759 LVENGANVNATTN---LGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           LVE+GA V A T           +  ++G       L G   +      
Sbjct: 122 LVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNK 170

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  177 bits (450), Expect = 1e-50
 Identities = 43/267 (16%), Positives = 77/267 (28%), Gaps = 41/267 (15%)

Query: 523 KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLA 582
             G   L    +    K     +                   G  +          L  +
Sbjct: 3   ITGQVSLPPGKRTNLRKTGSERIAH-----------------GMRVKFN-PLPLALLLDS 44

Query: 583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGY 642
           +  G   + Q ++ +          G+T LH A    H  +   L+  G + +A   +G+
Sbjct: 45  SLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGW 104

Query: 643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAG---FTPLHLSAQEGHTDMSSLLIEHGAT 699
           TPLH AA  N + +   L+E  A   A + +            +EG+T  S  L      
Sbjct: 105 TPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEK 164

Query: 700 VSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
           +    K  +  L     +           N  E+        T +H        + + + 
Sbjct: 165 MGIMNKGVIYALWDYEPQ-----------NDDELPMKEGDCMTIIHR----EDEDEIEWW 209

Query: 760 VENGANVNATTNLGYTPLHQASQQGRV 786
                +       GY P +      R+
Sbjct: 210 WARLND-----KEGYVPRNLLGLYPRI 231

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  175 bits (447), Expect = 3e-50
 Identities = 52/307 (16%), Positives = 87/307 (28%), Gaps = 77/307 (25%)

Query: 360 PDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQS 419
           P+   + G+  L    R N        + +G  V         PL               
Sbjct: 1   PE---ITGQVSLPPGKRTNLRKTGSERIAHGMRVKF------NPL--------------- 36

Query: 420 ALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLL 479
                     L  ++   + D+V+ ++           E  T LH A   G+ +I   L+
Sbjct: 37  ------PLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLV 90

Query: 480 QHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKG---FTPLHLAAKYG 536
           Q G +V+A   DG+T LH +A     +V   L ESGA++ A T              + G
Sbjct: 91  QFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEG 150

Query: 537 RMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 596
             + +Q L                       +    K     L         ++   + +
Sbjct: 151 YTQCSQFLYGV-----------------QEKMGIMNKGVIYALWDYEPQNDDELP--MKE 191

Query: 597 KDAP-VDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAA-----K 650
            D   +  +          A   D                     GY P ++       K
Sbjct: 192 GDCMTIIHREDEDEIEWWWARLNDK-------------------EGYVPRNLLGLYPRIK 232

Query: 651 KNQMDIA 657
             Q  +A
Sbjct: 233 PRQRSLA 239

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  175 bits (446), Expect = 4e-50
 Identities = 35/218 (16%), Positives = 65/218 (29%), Gaps = 17/218 (7%)

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
             L    +          I+ G  ++      L  L  ++  G  +++  +I +      
Sbjct: 7   VSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSL 65

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR 249
               G+  LH A    H    + L+  G  V+    D  T LH A+ C +V+V K L++ 
Sbjct: 66  PNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVES 125

Query: 250 KADPNARALNG---FTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLH 306
            A   A   +            ++         +   ++ L   +             L 
Sbjct: 126 GAAVFAMTYSDMQTAADKCEEMEE--------GYTQCSQFLYGVQEKMGIMNKGVIYALW 177

Query: 307 IACKKNRYKVVELLLKYGASIAATTESGL--TPLHVAS 342
               +N     EL +K G  +               A 
Sbjct: 178 DYEPQN---DDELPMKEGDCMTIIHREDEDEIEWWWAR 212

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  174 bits (444), Expect = 7e-50
 Identities = 42/226 (18%), Positives = 70/226 (30%), Gaps = 19/226 (8%)

Query: 160 DGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAG 219
            G   L    R+         I  G  +       LA L  +S        + +IY    
Sbjct: 4   TGQVSLPPGKRTNLRKTGSERIAHGMRV-KFNPLPLALLLDSSLEGEFDLVQRIIYEVDD 62

Query: 220 VDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCN 279
                 + +TALH A   GH  + K L+    + NA   +G+TPLH A        + CN
Sbjct: 63  PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCA--------ASCN 114

Query: 280 HVWVAKTLLDRKADPNARALNG---FTPLHIACKKNRYKVVELLLKYGASIAATTESGLT 336
           +V V K L++  A   A   +            ++   +  + L      +    +  + 
Sbjct: 115 NVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIY 174

Query: 337 PLHVASFMGCMNIAIFLLQAGAAPDTATVRG---ETPLHLAARANQ 379
            L          + +          T   R    E     A   ++
Sbjct: 175 ALWDYEPQNDDELPM----KEGDCMTIIHREDEDEIEWWWARLNDK 216

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  174 bits (443), Expect = 9e-50
 Identities = 38/205 (18%), Positives = 74/205 (36%), Gaps = 9/205 (4%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
              +     + +G  +          L  ++ E    +V+ ++ +  + +L  +  IT L
Sbjct: 16  NLRKTGSERIAHGMRVKFNP-LPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITAL 74

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H A   G   +V+ L+  G N+ A   DG TPLHCAA   +  V   L+E GAA+++ T 
Sbjct: 75  HNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTY 134

Query: 193 NGL---APLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR 249
           + +   A      +  +   ++ L      +  +    + AL            +  +  
Sbjct: 135 SDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQND---DELPMKE 191

Query: 250 KADPNA--RALNGFTPLHIACKKNR 272
                   R          A   ++
Sbjct: 192 GDCMTIIHREDEDEIEWWWARLNDK 216

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  173 bits (440), Expect = 3e-49
 Identities = 42/283 (14%), Positives = 78/283 (27%), Gaps = 56/283 (19%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
            G   L    + N                +                L  +  +  + +V+
Sbjct: 4   TGQVSLPPGKRTN--------LRKTGSERIAHGMRVKFNP-LPLALLLDSSLEGEFDLVQ 54

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN 378
            ++      +   + G+T LH A   G   I  FL+Q G   + A   G TPLH AA  N
Sbjct: 55  RIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN 114

Query: 379 QTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQ 438
              + + L+ +GA+V A    D                        +             
Sbjct: 115 NVQVCKFLVESGAAVFAMTYSDM-----------------------QTAADKCEEMEEGY 151

Query: 439 TDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY--TAL 496
           T   + L      +    +     L       + ++    ++ G  +    ++       
Sbjct: 152 TQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELP---MKEGDCMTIIHREDEDEIEW 208

Query: 497 HISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMK 539
             +                       K+G+ P +L   Y R+K
Sbjct: 209 WWARLND-------------------KEGYVPRNLLGLYPRIK 232

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  170 bits (434), Expect = 2e-48
 Identities = 49/248 (19%), Positives = 78/248 (31%), Gaps = 29/248 (11%)

Query: 192 KNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKA 251
             G   L    + +        I HG  V       L  L  +S  G   + + ++    
Sbjct: 3   ITGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVD 61

Query: 252 DPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKK 311
           DP+     G T LH A            H  + K L+    + NA   +G+TPLH A   
Sbjct: 62  DPSLPNDEGITALHNAVCA--------GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASC 113

Query: 312 NRYKVVELLLKYGASIAATTESGL---TPLHVASFMGCMNIAIFLLQAGAAPDTATVRGE 368
           N  +V + L++ GA++ A T S +            G    + FL               
Sbjct: 114 NNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVI 173

Query: 369 TPLHLAARANQTDIVRILLRNGASVDARARED--QTPLHVASRLRRFSSASQSALTRVRG 426
             L      N  +   + ++ G  +    RED  +     A    +             G
Sbjct: 174 YALWDYEPQNDDE---LPMKEGDCMTIIHREDEDEIEWWWARLNDK------------EG 218

Query: 427 ETPLHLAA 434
             P +L  
Sbjct: 219 YVPRNLLG 226

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  174 bits (443), Expect = 3e-50
 Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 50/242 (20%)

Query: 85  GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMV 144
           G+ ++    NG     +  +++ +  + +L +   +      +N TPL VAC  G    +
Sbjct: 1   GSHMDK---NGEIVEKIKDEKSINQNLDFLRNYRDS------YNRTPLMVACMLGMENAI 51

Query: 145 ELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQG 204
           + L+     +E K  +G T L  A ++    + + L+ KG+ + +K  +G          
Sbjct: 52  DKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSG---------- 101

Query: 205 DHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPL 264
                                   T L  +   G+  ++  LL+  A+ N R L G TPL
Sbjct: 102 -----------------------KTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPL 138

Query: 265 HIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYG 324
            +A        S      + K LL+  AD +AR L G T    A    R +V+++  +  
Sbjct: 139 IVA--------SKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190

Query: 325 AS 326
            +
Sbjct: 191 RA 192

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  171 bits (436), Expect = 3e-49
 Identities = 48/217 (22%), Positives = 84/217 (38%), Gaps = 26/217 (11%)

Query: 482 GASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIA 541
           G+ +D   K+G     I  ++  ++    L               TPL +A   G     
Sbjct: 1   GSHMD---KNGEIVEKIKDEKSINQNLDFLRN------YRDSYNRTPLMVACMLGMENAI 51

Query: 542 QMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPV 601
             L++                     +     +G T L  A K  R+ IA+ LL K + V
Sbjct: 52  DKLVEN-----------------FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94

Query: 602 DSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLL 661
           +++  +G TPL  +  + +  ++  LL+ GA+ +     G TPL +A+K  + +I   LL
Sbjct: 95  NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154

Query: 662 EYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
           E  A  +A    G T    +   G  ++  +  E   
Sbjct: 155 ELGADISARDLTGLTAEASARIFGRQEVIKIFTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  171 bits (435), Expect = 3e-49
 Identities = 48/209 (22%), Positives = 88/209 (42%), Gaps = 17/209 (8%)

Query: 151 GANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAAT 210
           G++++   ++G            +  +D L         +      PL +A     E A 
Sbjct: 1   GSHMD---KNGEIVEKIKDEKSINQNLDFLRNY------RDSYNRTPLMVACMLGMENAI 51

Query: 211 RVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKK 270
             L+ +   +++  ++  TAL  A     + +A+ LL + ++ N +  +G TPL  +   
Sbjct: 52  DKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWS--- 108

Query: 271 NRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAAT 330
                    +  ++  LL+  A+ N R L G TPL +A K  R ++V+ LL+ GA I+A 
Sbjct: 109 -----IIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISAR 163

Query: 331 TESGLTPLHVASFMGCMNIAIFLLQAGAA 359
             +GLT    A   G   +     +   A
Sbjct: 164 DLTGLTAEASARIFGRQEVIKIFTEVRRA 192

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  167 bits (426), Expect = 6e-48
 Identities = 56/229 (24%), Positives = 87/229 (37%), Gaps = 42/229 (18%)

Query: 565 GASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVA 624
           G+ +    K G     +  +    +    L       + +     TPL VA     +N  
Sbjct: 1   GSHMD---KNGEIVEKIKDEKSINQNLDFL------RNYRDSYNRTPLMVACMLGMENAI 51

Query: 625 LLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQE 684
             L++           G T L  A K N++ IA  LL   +  N +  +G TPL  S   
Sbjct: 52  DKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIF 111

Query: 685 GHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPL 744
           G+++MS  L+EHGA V    +N                                 G TPL
Sbjct: 112 GYSEMSYFLLEHGANV--NDRN-------------------------------LEGETPL 138

Query: 745 HIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
            +AS +G+  +V+ L+E GA+++A    G T    A   GR  +I +  
Sbjct: 139 IVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  157 bits (400), Expect = 2e-44
 Identities = 41/209 (19%), Positives = 76/209 (36%), Gaps = 26/209 (12%)

Query: 515 GASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKK 574
           G+ +    K G     +  +    +    L                              
Sbjct: 1   GSHMD---KNGEIVEKIKDEKSINQNLDFL-----------------------RNYRDSY 34

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
             TPL +A   G       L++    ++ +   G T L  A   +   +A  LL +G++ 
Sbjct: 35  NRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94

Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
           +    +G TPL  +      +++  LLE+ A  N  +  G TPL ++++ G +++   L+
Sbjct: 95  NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154

Query: 695 EHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
           E GA +S +   GLT         +  V 
Sbjct: 155 ELGADISARDLTGLTAEASARIFGRQEVI 183

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  156 bits (398), Expect = 4e-44
 Identities = 51/229 (22%), Positives = 81/229 (35%), Gaps = 49/229 (21%)

Query: 367 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRG 426
           GE    +    +    +  L  N                                     
Sbjct: 8   GEIVEKIKDEKSINQNLDFLR-NYRDSY-------------------------------N 35

Query: 427 ETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVD 486
            TPL +A      + +  L+ N   ++ +  E  T L  A +     IA  LL  G++V+
Sbjct: 36  RTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN 95

Query: 487 APTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
                G T L  S   G  E++  L E GA++     +G TPL +A+KYGR +I + LL+
Sbjct: 96  TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLE 155

Query: 547 KDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 595
                             GA I+A    G T    A  +GR ++ ++  
Sbjct: 156 L-----------------GADISARDLTGLTAEASARIFGRQEVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  154 bits (393), Expect = 2e-43
 Identities = 54/212 (25%), Positives = 85/212 (40%), Gaps = 32/212 (15%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA 359
           NG     I  +K+  + ++ L               TPL VA  +G  N    L++    
Sbjct: 7   NGEIVEKIKDEKSINQNLDFL------RNYRDSYNRTPLMVACMLGMENAIDKLVENFDK 60

Query: 360 PDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQS 419
            +   + G T L  A + N+  I   LL  G++V+ +                       
Sbjct: 61  LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFS-------------------- 100

Query: 420 ALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLL 479
                 G+TPL  +     +++   LL +GA+V+ R  E +TPL VAS+ G  +I   LL
Sbjct: 101 ------GKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154

Query: 480 QHGASVDAPTKDGYTALHISAKEGQDEVASIL 511
           + GA + A    G TA   +   G+ EV  I 
Sbjct: 155 ELGADISARDLTGLTAEASARIFGRQEVIKIF 186

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  153 bits (390), Expect = 4e-43
 Identities = 39/147 (26%), Positives = 62/147 (42%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G E     LV+N   +  + + G T L  A + N  G+   LLSKG N         TPL
Sbjct: 46  GMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPL 105

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
             +  +G   M   L+  GAN+  +  +G TPL  A++ G   ++  L+E GA + ++  
Sbjct: 106 MWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDL 165

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAG 219
            GL     A     +   ++       
Sbjct: 166 TGLTAEASARIFGRQEVIKIFTEVRRA 192

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  150 bits (382), Expect = 5e-42
 Identities = 52/226 (23%), Positives = 84/226 (37%), Gaps = 40/226 (17%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
           NG     I  +K+       N       L       N R     TPL +AC       ++
Sbjct: 7   NGEIVEKIKDEKS------INQN--LDFLR------NYRDSYNRTPLMVACMLGMENAID 52

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN 378
            L++    +      G T L  A     + IA  LL  G+  +T    G+TPL  +    
Sbjct: 53  KLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFG 112

Query: 379 QTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQ 438
            +++   LL +GA+V+ R  E                          GETPL +A++  +
Sbjct: 113 YSEMSYFLLEHGANVNDRNLE--------------------------GETPLIVASKYGR 146

Query: 439 TDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGAS 484
           ++IV+ LL  GA + AR     T    A   G  ++  +  +   +
Sbjct: 147 SEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVRRA 192

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  144 bits (365), Expect = 1e-39
 Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 6/166 (3%)

Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
           KNG     I  +K+       L       N       TPL ++   G  +    L+E+  
Sbjct: 6   KNGEIVEKIKDEKSINQNLDFLR------NYRDSYNRTPLMVACMLGMENAIDKLVENFD 59

Query: 699 TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY 758
            +  +   G T L    + +++ +A   +  G+ ++    +G TPL  +  FG   M  +
Sbjct: 60  KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYF 119

Query: 759 LVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           L+E+GANVN     G TPL  AS+ GR  I+  LL  GA  +A   
Sbjct: 120 LLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDL 165

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 90.9 bits (227), Expect = 4e-21
 Identities = 43/197 (21%), Positives = 65/197 (32%), Gaps = 60/197 (30%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEV--------SFSNT 49
             G +  +  L+EN    + K      AL  A K +    A  LL              T
Sbjct: 44  MLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKT 103

Query: 50  KLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDG 109
            L  S+                 G  E++  L+++GA +N ++L G TPL +A++     
Sbjct: 104 PLMWSIIF---------------GYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGR-- 146

Query: 110 VVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAA 169
                                            +V+ L+  GA+I A+   GLT    A 
Sbjct: 147 -------------------------------SEIVKKLLELGADISARDLTGLTAEASAR 175

Query: 170 RSGHDNVIDILIEKGAA 186
             G   VI I  E   A
Sbjct: 176 IFGRQEVIKIFTEVRRA 192

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  172 bits (438), Expect = 4e-50
 Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 3/151 (1%)

Query: 574 KGFTPLHLAAKYGRMKIAQMLLQKD-APVDSQGKNGVTPLHVASHYDHQNVALLLLDRGA 632
           +    L  AA  G ++  + LL ++    D+  + G T L V   +    +AL LL +GA
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGA 59

Query: 633 SPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSL 692
           SP+    +G +P+H AA+   +D    L+E+ A  N     G  P+HL+ QEGHT + S 
Sbjct: 60  SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119

Query: 693 LIEHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
           L    + +  +   GLTPL L  Q    ++ 
Sbjct: 120 LAAE-SDLHRRDARGLTPLELALQRGAQDLV 149

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  163 bits (416), Expect = 5e-47
 Identities = 46/172 (26%), Positives = 67/172 (38%), Gaps = 20/172 (11%)

Query: 425 RGETPLHLAARANQTDIVRILL-RNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGA 483
           R    L  AA       VR LL R     DA  R  +T L V    G+  IA  LL+ GA
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGA 59

Query: 484 SVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQM 543
           S +     G + +H +A+ G  +   +L E GA +      G  P+HLA + G   +   
Sbjct: 60  SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119

Query: 544 LLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 595
           L                   + + +     +G TPL LA + G   +  +L 
Sbjct: 120 LA------------------AESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  158 bits (402), Expect = 4e-45
 Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 18/173 (10%)

Query: 524 KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAA 583
           +    L  AA  G ++  + LL ++                     A  + G T L +  
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRE----------------LVHPDALNRFGKTALQVMM 44

Query: 584 KYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYT 643
            +G   IA  LL++ A  + Q  +G +P+H A+     +   +L++ GA  +     G  
Sbjct: 45  -FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGAL 103

Query: 644 PLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH 696
           P+H+A ++    + + L    +  +     G TPL L+ Q G  D+  +L  H
Sbjct: 104 PIHLAVQEGHTAVVSFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  156 bits (398), Expect = 1e-44
 Identities = 49/181 (27%), Positives = 71/181 (39%), Gaps = 29/181 (16%)

Query: 366 RGETPLHLAARANQTDIVRILL-RNGASVDARAREDQTPLHVASRLRRFSSASQSALTRV 424
           R    L  AA       VR LL R     DA  R  +T L V                  
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF--------------- 45

Query: 425 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGAS 484
                         T I   LL+ GAS + +     +P+H A+R G  D   +L++HGA 
Sbjct: 46  ------------GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD 93

Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
           V+ P   G   +H++ +EG   V S L  + + +     +G TPL LA + G   +  +L
Sbjct: 94  VNVPDGTGALPIHLAVQEGHTAVVSFL-AAESDLHRRDARGLTPLELALQRGAQDLVDIL 152

Query: 545 L 545
            
Sbjct: 153 Q 153

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  151 bits (385), Expect = 7e-43
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 11/160 (6%)

Query: 229 TALHVASHCGHVRVAKTLLDRK-ADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTL 287
             L  A+  G V+  + LL R+   P+A    G T L +                +A  L
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF---------GSTAIALEL 54

Query: 288 LDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCM 347
           L + A PN +  +G +P+H A +      +++L+++GA +     +G  P+H+A   G  
Sbjct: 55  LKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHT 114

Query: 348 NIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILL 387
            +  FL    +       RG TPL LA +    D+V IL 
Sbjct: 115 AVVSFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  151 bits (384), Expect = 1e-42
 Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 3/155 (1%)

Query: 95  GFTPLYMAAQENHDGVVRYLLSKGG-NQTLATEHNITPLHVACKWGKVAMVELLISKGAN 153
               L  AA       VR LL +   +         T L V   +G  A+   L+ +GA+
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGAS 60

Query: 154 IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVL 213
              +   G +P+H AAR+G  + + +L+E GA +      G  P+H+A Q  H A    L
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120

Query: 214 IYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLD 248
               + +       LT L +A   G   +   L  
Sbjct: 121 A-AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  149 bits (380), Expect = 4e-42
 Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 11/161 (6%)

Query: 130 TPLHVACKWGKVAMV-ELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALY 188
             L  A   G V  V  LL  +  + +A  R G T L      G   +   L+++GA+  
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPN 62

Query: 189 SKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLD 248
            +  +G +P+H A++       +VL+ HGA V+         +H+A   GH  V    L 
Sbjct: 63  VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS-FLA 121

Query: 249 RKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLD 289
            ++D + R   G TPL +A               +   L  
Sbjct: 122 AESDLHRRDARGLTPLELA--------LQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  149 bits (378), Expect = 8e-42
 Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 2/142 (1%)

Query: 75  EEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHV 134
           +EV ++L       +  +  G T L +        +   LL +G +  +      +P+H 
Sbjct: 16  QEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHD 74

Query: 135 ACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNG 194
           A + G +  +++L+  GA++      G  P+H A + GH  V+  L    + L+ +   G
Sbjct: 75  AARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARG 133

Query: 195 LAPLHMASQGDHEAATRVLIYH 216
           L PL +A Q   +    +L  H
Sbjct: 134 LTPLELALQRGAQDLVDILQGH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  147 bits (374), Expect = 2e-41
 Identities = 42/172 (24%), Positives = 65/172 (37%), Gaps = 20/172 (11%)

Query: 492 GYTALHISAKEGQ-DEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAP 550
               L  +A  G   EV  +L        A  + G T L +   +G   IA  LL++   
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQ--- 57

Query: 551 VDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVT 610
                         GAS       G +P+H AA+ G +   ++L++  A V+     G  
Sbjct: 58  --------------GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGAL 103

Query: 611 PLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLE 662
           P+H+A    H  V   L    +  H     G TPL +A ++   D+   L  
Sbjct: 104 PIHLAVQEGHTAVVSFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  146 bits (372), Expect = 5e-41
 Identities = 47/182 (25%), Positives = 71/182 (39%), Gaps = 29/182 (15%)

Query: 301 GFTPLHIACKKNRYKVV-ELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA 359
               L  A  +   + V  LL +      A    G T L V  F G   IA+ LL+ GA+
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGAS 60

Query: 360 PDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQS 419
           P+     G +P+H AAR    D +++L+ +GA V+                         
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGT-------------------- 100

Query: 420 ALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLL 479
                 G  P+HLA +   T +V  L    + +  R     TPL +A + G  D+  +L 
Sbjct: 101 ------GALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

Query: 480 QH 481
            H
Sbjct: 154 GH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  145 bits (369), Expect = 1e-40
 Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 10/163 (6%)

Query: 192 KNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKA 251
           + G      A++GD +   R+L       D +     TAL V    G   +A  LL + A
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGA 59

Query: 252 DPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKK 311
            PN +  +G +P+H A +           +   K L++  AD N     G  P+H+A ++
Sbjct: 60  SPNVQDTSGTSPVHDAART--------GFLDTLKVLVEHGADVNVPDGTGALPIHLAVQE 111

Query: 312 NRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLL 354
               VV  L    + +      GLTPL +A   G  ++   L 
Sbjct: 112 GHTAVVSFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  130 bits (329), Expect = 3e-35
 Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 8/158 (5%)

Query: 25  ALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDN 84
            L  AA + D +    LL     +         T L+V          G   +A  L+  
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVM-------MFGSTAIALELLKQ 57

Query: 85  GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMV 144
           GA+ NVQ  +G +P++ AA+      ++ L+  G +  +       P+H+A + G  A+V
Sbjct: 58  GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVV 117

Query: 145 ELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIE 182
             L +  +++  +   GLTPL  A + G  +++DIL  
Sbjct: 118 SFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  124 bits (314), Expect = 3e-33
 Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 674 GFTPLHLSAQEGHTD-MSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAE 732
               L  +A  G    +  LL           + G T L +        +A   +  GA 
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS 60

Query: 733 IDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLL 792
            +    +G +P+H A+  G L+ ++ LVE+GA+VN     G  P+H A Q+G   ++  L
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120

Query: 793 LGAGAQPNATTN 804
             A +  +    
Sbjct: 121 A-AESDLHRRDA 131

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 70.1 bits (173), Expect = 3e-14
 Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 15/95 (15%)

Query: 740 GFTPLHIASHFGQLNMVRYLVE-NGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQ 798
               L  A+  G +  VR L+     + +A    G T L      G   I   LL  GA 
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGAS 60

Query: 799 PNATTN-----LFCCA--------TILVKNGAEID 820
           PN         +   A         +LV++GA+++
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVN 95

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 50.9 bits (123), Expect = 1e-07
 Identities = 17/119 (14%), Positives = 32/119 (26%), Gaps = 45/119 (37%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
           + G    + VL+E+    +         +H+A ++                         
Sbjct: 77  RTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQE------------------------- 111

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLS 116
                          G   V   L    + ++ +   G TPL +A Q     +V  L  
Sbjct: 112 ---------------GHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  170 bits (434), Expect = 3e-49
 Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 17/173 (9%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
               L  AARA + D VRIL+ NGA V+A      TPLH+A+  G+ +I  +LL++GA V
Sbjct: 14  LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV 73

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           +A    G T L ++A  G  E+  +L ++GA + A   +G TPLHLAA +G ++I ++LL
Sbjct: 74  NAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLL 133

Query: 546 QKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD 598
           +                  GA + A  K G T   ++   G   +A++L + +
Sbjct: 134 KN-----------------GADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  165 bits (421), Expect = 2e-47
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 9/175 (5%)

Query: 150 KGANIEAKT-RDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEA 208
           +G++       D    L  AAR+G D+ + IL+  GA + ++  +G  PLH+A+   H  
Sbjct: 2   RGSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLE 61

Query: 209 ATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIAC 268
              VL+ +GA V+ +    +T L +A+  GH+ + + LL   AD NA  + G TPLH+A 
Sbjct: 62  IVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLA- 120

Query: 269 KKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKY 323
                  +   H+ + + LL   AD NA+   G T   I+       + E+L K 
Sbjct: 121 -------AMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  165 bits (420), Expect = 2e-47
 Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 24/190 (12%)

Query: 475 ASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAK 534
           +     HG+       D    L  +A+ G+D+   IL  +GA + A    G+TPLHLAA 
Sbjct: 4   SHHHHHHGS-------DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAF 56

Query: 535 YGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 594
            G ++I ++LL+                  GA + A    G TPL LAA +G ++I ++L
Sbjct: 57  NGHLEIVEVLLKN-----------------GADVNAVDHAGMTPLRLAALFGHLEIVEVL 99

Query: 595 LQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQM 654
           L+  A V++    G TPLH+A+ + H  +  +LL  GA  +A  K G T   I+      
Sbjct: 100 LKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNE 159

Query: 655 DIATTLLEYN 664
           D+A  L + N
Sbjct: 160 DLAEILQKLN 169

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  164 bits (419), Expect = 3e-47
 Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 7/170 (4%)

Query: 78  AKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACK 137
           +     +G+       +    L  AA+   D  VR L++ G +         TPLH+A  
Sbjct: 4   SHHHHHHGS-------DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAF 56

Query: 138 WGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAP 197
            G + +VE+L+  GA++ A    G+TPL  AA  GH  ++++L++ GA + +    G  P
Sbjct: 57  NGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTP 116

Query: 198 LHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLL 247
           LH+A+   H     VL+ +GA V+       TA  ++   G+  +A+ L 
Sbjct: 117 LHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  164 bits (418), Expect = 4e-47
 Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 8/159 (5%)

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
             L  A + G+   V +L++ GA++ A+   G TPLH AA +GH  ++++L++ GA + +
Sbjct: 16  KKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA 75

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR 249
               G+ PL +A+   H     VL+ +GA V+   ++  T LH+A+  GH+ + + LL  
Sbjct: 76  VDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN 135

Query: 250 KADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLL 288
            AD NA+   G T   I+            +  +A+ L 
Sbjct: 136 GADVNAQDKFGKTAFDIS--------IDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  161 bits (411), Expect = 3e-46
 Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)

Query: 630 RGASP-HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD 688
           RG+   H    +    L  AA+  + D    L+   A  NAE  +G+TPLHL+A  GH +
Sbjct: 2   RGSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLE 61

Query: 689 MSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS 748
           +  +L+++GA V+     G+TPL L A    + +  + + NGA+++     G TPLH+A+
Sbjct: 62  IVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAA 121

Query: 749 HFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
            FG L +V  L++NGA+VNA    G T    +   G   + ++L 
Sbjct: 122 MFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  160 bits (409), Expect = 7e-46
 Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 15/176 (8%)

Query: 212 VLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKN 271
              +HG+       D    L  A+  G     + L+   AD NA   +G+TPLH+A    
Sbjct: 6   HHHHHGS-------DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNG 58

Query: 272 RYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATT 331
                   H+ + + LL   AD NA    G TPL +A      ++VE+LLK GA + A  
Sbjct: 59  --------HLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNAND 110

Query: 332 ESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILL 387
             G TPLH+A+  G + I   LL+ GA  +     G+T   ++      D+  IL 
Sbjct: 111 MEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  160 bits (409), Expect = 7e-46
 Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 17/172 (9%)

Query: 525 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK 584
               L  AA+ GR    ++L+                   GA + A    G+TPLHLAA 
Sbjct: 14  LGKKLLEAARAGRDDEVRILMAN-----------------GADVNAEDASGWTPLHLAAF 56

Query: 585 YGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTP 644
            G ++I ++LL+  A V++    G+TPL +A+ + H  +  +LL  GA  +A    G+TP
Sbjct: 57  NGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTP 116

Query: 645 LHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH 696
           LH+AA    ++I   LL+  A  NA+ K G T   +S   G+ D++ +L + 
Sbjct: 117 LHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  159 bits (404), Expect = 3e-45
 Identities = 45/144 (31%), Positives = 81/144 (56%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G+++  +IL+ NGA +N +  +G+TPL++AA   H  +V  LL  G +        +TPL
Sbjct: 25  GRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPL 84

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
            +A  +G + +VE+L+  GA++ A   +G TPLH AA  GH  ++++L++ GA + ++ K
Sbjct: 85  RLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDK 144

Query: 193 NGLAPLHMASQGDHEAATRVLIYH 216
            G     ++    +E    +L   
Sbjct: 145 FGKTAFDISIDNGNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  155 bits (396), Expect = 4e-44
 Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 15/178 (8%)

Query: 178 DILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHC 237
                 G+       +    L  A++   +   R+L+ +GA V+       T LH+A+  
Sbjct: 5   HHHHHHGS-------DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFN 57

Query: 238 GHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNAR 297
           GH+ + + LL   AD NA    G TPL +A        +   H+ + + LL   AD NA 
Sbjct: 58  GHLEIVEVLLKNGADVNAVDHAGMTPLRLA--------ALFGHLEIVEVLLKNGADVNAN 109

Query: 298 ALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQ 355
            + G TPLH+A      ++VE+LLK GA + A  + G T   ++   G  ++A  L +
Sbjct: 110 DMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  155 bits (396), Expect = 4e-44
 Identities = 51/149 (34%), Positives = 79/149 (53%)

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
               L  AA+ GR    ++L+   A V+++  +G TPLH+A+   H  +  +LL  GA  
Sbjct: 14  LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV 73

Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
           +AV   G TPL +AA    ++I   LL+  A  NA    G TPLHL+A  GH ++  +L+
Sbjct: 74  NAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLL 133

Query: 695 EHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
           ++GA V+ Q K G T   +       ++A
Sbjct: 134 KNGADVNAQDKFGKTAFDISIDNGNEDLA 162

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  155 bits (394), Expect = 7e-44
 Identities = 49/159 (30%), Positives = 80/159 (50%)

Query: 603 SQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLE 662
             G +    L  A+     +   +L+  GA  +A   +G+TPLH+AA    ++I   LL+
Sbjct: 9   HHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLK 68

Query: 663 YNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNV 722
             A  NA   AG TPL L+A  GH ++  +L+++GA V+     G TPLHL A    + +
Sbjct: 69  NGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEI 128

Query: 723 ATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE 761
             + + NGA+++   K G T   I+   G  ++   L +
Sbjct: 129 VEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  147 bits (375), Expect = 3e-41
 Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 8/151 (5%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
           +    L  A        +        + L+   AD NA   +G+TPLH+A      ++VE
Sbjct: 13  DLGKKLLEA--------ARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVE 64

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN 378
           +LLK GA + A   +G+TPL +A+  G + I   LL+ GA  +   + G TPLHLAA   
Sbjct: 65  VLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFG 124

Query: 379 QTDIVRILLRNGASVDARAREDQTPLHVASR 409
             +IV +LL+NGA V+A+ +  +T   ++  
Sbjct: 125 HLEIVEVLLKNGADVNAQDKFGKTAFDISID 155

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  168 bits (428), Expect = 1e-48
 Identities = 56/176 (31%), Positives = 82/176 (46%), Gaps = 17/176 (9%)

Query: 523 KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLA 582
            +    L  AAK G ++  + L        +             +      +  TPLH A
Sbjct: 6   SEADRQLLEAAKAGDVETVKKLC-------TVQ---------SVNCRDIEGRQSTPLHFA 49

Query: 583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGY 642
           A Y R+ + + LLQ  A V ++ K G+ PLH A  Y H  VA LL+  GA  +      +
Sbjct: 50  AGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKF 109

Query: 643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
           TPLH AA K + +I   LL++ A P  +++ G TPL L  ++G TD+  LL    A
Sbjct: 110 TPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDL-VKDGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  159 bits (404), Expect = 3e-45
 Identities = 49/176 (27%), Positives = 67/176 (38%), Gaps = 13/176 (7%)

Query: 151 GANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAA-LYSKTKNGLAPLHMASQGDHEAA 209
           GA   +   +    L  AA++G    +  L    +            PLH A+  +  + 
Sbjct: 1   GAMGNS---EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSV 57

Query: 210 TRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACK 269
              L+ HGA V       L  LH A   GH  VA+ L+   A  N   L  FTPLH A  
Sbjct: 58  VEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAA 117

Query: 270 KNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGA 325
           K            + K LL   ADP  +  +G TPL +  K     + +LL    A
Sbjct: 118 K--------GKYEICKLLLQHGADPTKKNRDGNTPLDLV-KDGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  157 bits (400), Expect = 1e-44
 Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 5/168 (2%)

Query: 85  GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGG-NQTLATEHNITPLHVACKWGKVAM 143
           GA  N         L  AA+      V+ L +    N         TPLH A  + +V++
Sbjct: 1   GAMGNS---EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSV 57

Query: 144 VELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQ 203
           VE L+  GA++ AK + GL PLH A   GH  V ++L++ GA +         PLH A+ 
Sbjct: 58  VEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAA 117

Query: 204 GDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKA 251
                  ++L+ HGA   +   D  T L +    G   +   L    A
Sbjct: 118 KGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  152 bits (388), Expect = 4e-43
 Identities = 54/175 (30%), Positives = 71/175 (40%), Gaps = 19/175 (10%)

Query: 426 GETPLHLAARANQTDIVRILL-RNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGAS 484
            +  L  AA+A   + V+ L      +         TPLH A+      +   LLQHGA 
Sbjct: 8   ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD 67

Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
           V A  K G   LH +   G  EVA +L + GA +       FTPLH AA  G+ +I ++L
Sbjct: 68  VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLL 127

Query: 545 LQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA 599
           LQ                  GA  T   + G TPL L    G   I  +L    A
Sbjct: 128 LQH-----------------GADPTKKNRDGNTPLDLVK-DGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  152 bits (388), Expect = 5e-43
 Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 2/160 (1%)

Query: 573 KKGFTPLHLAAKYGRMKIAQMLL-QKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRG 631
            +    L  AAK G ++  + L   +            TPLH A+ Y+  +V   LL  G
Sbjct: 6   SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG 65

Query: 632 ASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSS 691
           A  HA  K G  PLH A      ++A  L+++ A  N      FTPLH +A +G  ++  
Sbjct: 66  ADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICK 125

Query: 692 LLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGA 731
           LL++HGA  + + ++G TPL L  ++   ++  +   + A
Sbjct: 126 LLLQHGADPTKKNRDGNTPLDL-VKDGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  151 bits (385), Expect = 1e-42
 Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 29/193 (15%)

Query: 357 GAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSA 416
           GA  ++     +  L  AA+A   + V+ L    + V+ R  E                 
Sbjct: 1   GAMGNS---EADRQLLEAAKAGDVETVKKLCTVQS-VNCRDIEG---------------- 40

Query: 417 SQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIAS 476
                   R  TPLH AA  N+  +V  LL++GA V A+ +    PLH A   G+ ++A 
Sbjct: 41  --------RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAE 92

Query: 477 LLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYG 536
           LL++HGA V+      +T LH +A +G+ E+  +L + GA  T   + G TPL L    G
Sbjct: 93  LLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVK-DG 151

Query: 537 RMKIAQMLLQKDA 549
              I  +L    A
Sbjct: 152 DTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  150 bits (382), Expect = 3e-42
 Identities = 46/160 (28%), Positives = 66/160 (41%), Gaps = 2/160 (1%)

Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYN-AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHG 697
                 L  AAK   ++    L                TPLH +A      +   L++HG
Sbjct: 6   SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG 65

Query: 698 ATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVR 757
           A V  + K GL PLH         VA + + +GA ++      FTPLH A+  G+  + +
Sbjct: 66  ADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICK 125

Query: 758 YLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
            L+++GA+       G TPL      G   I DLL G  A
Sbjct: 126 LLLQHGADPTKKNRDGNTPLDLVK-DGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  149 bits (378), Expect = 9e-42
 Identities = 57/201 (28%), Positives = 79/201 (39%), Gaps = 39/201 (19%)

Query: 251 ADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRK-ADPNARALNGFTPLHIAC 309
           A  N+        L  A K           V   K L   +  +         TPLH A 
Sbjct: 2   AMGNS---EADRQLLEAAKAG--------DVETVKKLCTVQSVNCRDIEGRQSTPLHFAA 50

Query: 310 KKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGET 369
             NR  VVE LL++GA + A  + GL PLH A   G   +A  L++ GA  + A +   T
Sbjct: 51  GYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFT 110

Query: 370 PLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETP 429
           PLH AA   + +I ++LL++GA    + R+                          G TP
Sbjct: 111 PLHEAAAKGKYEICKLLLQHGADPTKKNRD--------------------------GNTP 144

Query: 430 LHLAARANQTDIVRILLRNGA 450
           L L      TDI  +L  + A
Sbjct: 145 LDLVKD-GDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  147 bits (375), Expect = 3e-41
 Identities = 45/147 (30%), Positives = 62/147 (42%), Gaps = 2/147 (1%)

Query: 73  GQEEVAKILVD-NGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITP 131
           G  E  K L                TPL+ AA  N   VV YLL  G +     +  + P
Sbjct: 19  GDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVP 78

Query: 132 LHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKT 191
           LH AC +G   + ELL+  GA +        TPLH AA  G   +  +L++ GA    K 
Sbjct: 79  LHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKN 138

Query: 192 KNGLAPLHMASQGDHEAATRVLIYHGA 218
           ++G  PL +   GD +    +L    A
Sbjct: 139 RDGNTPLDLVKDGDTDIQ-DLLRGDAA 164

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  170 bits (433), Expect = 2e-48
 Identities = 44/228 (19%), Positives = 82/228 (35%), Gaps = 12/228 (5%)

Query: 560 ILTESGASITATTKKGFTP---LHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVAS 616
            +     S     +    P   L  AA  G +++ Q  +++        + G+T LH A 
Sbjct: 3   SVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAI 62

Query: 617 HYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE-SKAGF 675
              + ++   L+  GA+ ++   +G+TPLH AA  N   I   L+++ A   A     G 
Sbjct: 63  CGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGA 122

Query: 676 TPLHL--SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEI 733
           T        +EG+ D ++ L +   ++       +  L   + E       ++   G  +
Sbjct: 123 TAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAE---FGDELSFREGESV 179

Query: 734 DPVTK--AGFTPLHIASHFGQLNMV-RYLVENGANVNATTNLGYTPLH 778
             + +     T    A+  GQ   V R        V    +      H
Sbjct: 180 TVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRVKPQRSKVKHHHH 227

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  170 bits (432), Expect = 2e-48
 Identities = 44/236 (18%), Positives = 73/236 (30%), Gaps = 16/236 (6%)

Query: 111 VRYLLSKGGNQTLATEHNITP---LHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHC 167
           +R +L K G+   A    + P   L  A   G++ +V+  + +  +      +G+T LH 
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHN 60

Query: 168 AARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITV-D 226
           A    + +++D LI  GA + S   +G  PLH A+  +       L+ HGA +   T+ D
Sbjct: 61  AICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSD 120

Query: 227 YLTALHVASHC--GHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVA 284
             TA         G+   A  L D +             L     +              
Sbjct: 121 GATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAE---------FGDEL 171

Query: 285 KTLLDRKADPNARALNGFTPLHIACKKNRYKVVE-LLLKYGASIAATTESGLTPLH 339
                       R     T    A    +   V          +           H
Sbjct: 172 SFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRVKPQRSKVKHHHH 227

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  169 bits (431), Expect = 4e-48
 Identities = 40/234 (17%), Positives = 67/234 (28%), Gaps = 12/234 (5%)

Query: 144 VELLISKGANIEAKTR---DGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHM 200
           +  ++ K  +     R   + L  L  AA +G   V+   +++        + G+  LH 
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHN 60

Query: 201 ASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALN- 259
           A  G + +    LI  GA V+       T LH A+ C    +   L+   A   A  L+ 
Sbjct: 61  AICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSD 120

Query: 260 GFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVEL 319
           G T                 +   A  L D +             L     +     +  
Sbjct: 121 GATAFEKC------DPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG-DELSF 173

Query: 320 LLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHL 373
                 ++        T    A+  G           G  P     R +   H 
Sbjct: 174 REGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY-FGLFPRVKPQRSKVKHHH 226

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  164 bits (417), Expect = 3e-46
 Identities = 49/266 (18%), Positives = 76/266 (28%), Gaps = 43/266 (16%)

Query: 383 VRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIV 442
           +R +LR   S     R    PL                         L  AA   + ++V
Sbjct: 1   MRSVLRKAGSPRKARRARLNPL-----------------------VLLLDAALTGELEVV 37

Query: 443 RILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKE 502
           +  ++          E  T LH A    N  I   L+  GA+V++P   G+T LH +A  
Sbjct: 38  QQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASC 97

Query: 503 GQDEVASILTESGASITATTKK-GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASIL 561
               +   L + GA+I ATT   G T       Y                      A+ L
Sbjct: 98  NDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYA---------------DCATYL 142

Query: 562 TESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQ 621
            +   S+          L   +             +   V  +     T    A+ +  +
Sbjct: 143 ADVEQSMGLMNSGAVYALWDYSA-EFGDELSFREGESVTVLRRDGPEETDWWWAALHGQE 201

Query: 622 N-VALLLLDRGASPHAVAKNGYTPLH 646
             V       G  P    +      H
Sbjct: 202 GYVPRNYF--GLFPRVKPQRSKVKHH 225

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  163 bits (415), Expect = 5e-46
 Identities = 40/200 (20%), Positives = 67/200 (33%), Gaps = 7/200 (3%)

Query: 79  KILVDNGATINVQ---SLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVA 135
           + ++    +        LN    L  AA      VV+  + +  + +   E  IT LH A
Sbjct: 2   RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNA 61

Query: 136 CKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKT-KNG 194
                 ++V+ LI+ GAN+ +    G TPLHCAA      +   L++ GAA+++ T  +G
Sbjct: 62  ICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDG 121

Query: 195 LAPLHMASQGD--HEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
                        +      L      +  +    + AL   S                 
Sbjct: 122 ATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYS-AEFGDELSFREGESVT 180

Query: 253 PNARALNGFTPLHIACKKNR 272
              R     T    A    +
Sbjct: 181 VLRRDGPEETDWWWAALHGQ 200

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  162 bits (411), Expect = 2e-45
 Identities = 54/252 (21%), Positives = 78/252 (30%), Gaps = 32/252 (12%)

Query: 285 KTLLDRKADPNAR---ALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVA 341
           +++L +   P       LN    L  A      +VV+  +K     +   E G+T LH A
Sbjct: 2   RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNA 61

Query: 342 SFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQ 401
                 +I  FL+ AGA  ++    G TPLH AA  N T I   L+++GA++ A    D 
Sbjct: 62  ICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSD- 120

Query: 402 TPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQT--DIVRILLRNGASVDARARED 459
                                   G T         +   D    L     S+       
Sbjct: 121 ------------------------GATAFEKCDPYREGYADCATYLADVEQSMGLMNSGA 156

Query: 460 QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDE-VASILTESGASI 518
              L   S    GD  S       +V        T    +A  GQ+  V          +
Sbjct: 157 VYALWDYSA-EFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRV 215

Query: 519 TATTKKGFTPLH 530
                K     H
Sbjct: 216 KPQRSKVKHHHH 227

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  155 bits (394), Expect = 3e-43
 Identities = 37/188 (19%), Positives = 59/188 (31%), Gaps = 4/188 (2%)

Query: 601 VDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTL 660
                 N +  L  A+      V    +     P    + G T LH A       I   L
Sbjct: 14  ARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFL 73

Query: 661 LEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQ-AKNGLTPLHLCA--QE 717
           +   A  N+    G+TPLH +A    T +   L++HGA +      +G T    C   +E
Sbjct: 74  ITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYRE 133

Query: 718 DKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPL 777
              + AT        +  +       L   S     + + +       V        T  
Sbjct: 134 GYADCATYLADVEQSMGLMNSGAVYALWDYSA-EFGDELSFREGESVTVLRRDGPEETDW 192

Query: 778 HQASQQGR 785
             A+  G+
Sbjct: 193 WWAALHGQ 200

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  154 bits (391), Expect = 8e-43
 Identities = 39/199 (19%), Positives = 63/199 (31%), Gaps = 9/199 (4%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G+ EV +  V      +  +  G T L+ A    +  +V +L++ G N      H  TPL
Sbjct: 32  GELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPL 91

Query: 133 HVACKWGKVAMVELLISKGANIEAKTR-DGLTPLHCAARS--GHDNVIDILIEKGAALYS 189
           H A       +   L+  GA I A T  DG T          G+ +    L +   ++  
Sbjct: 92  HCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGL 151

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDY--LTALHVASHCGHVR-VAKTL 246
                +  L   S    +    +    G  V  +  D    T    A+  G    V +  
Sbjct: 152 MNSGAVYALWDYSAEFGDE---LSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208

Query: 247 LDRKADPNARALNGFTPLH 265
                    +        H
Sbjct: 209 FGLFPRVKPQRSKVKHHHH 227

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  148 bits (377), Expect = 8e-41
 Identities = 52/234 (22%), Positives = 76/234 (32%), Gaps = 21/234 (8%)

Query: 244 KTLLDRKADPNAR---ALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALN 300
           +++L +   P       LN    L  A             + V +  +    DP+     
Sbjct: 2   RSVLRKAGSPRKARRARLNPLVLLLDAALTG--------ELEVVQQAVKEMNDPSQPNEE 53

Query: 301 GFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAP 360
           G T LH A     Y +V+ L+  GA++ +    G TPLH A+      I + L+Q GAA 
Sbjct: 54  GITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAI 113

Query: 361 DTATVR-GETPLHLAARANQT--DIVRILLRNGASVDARAREDQTPLHVASR-----LRR 412
              T+  G T         +   D    L     S+          L   S      L  
Sbjct: 114 FATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSF 173

Query: 413 FSSASQSALTR-VRGETPLHLAARANQTDIV-RILLRNGASVDARAREDQTPLH 464
               S + L R    ET    AA   Q   V R        V  +  + +   H
Sbjct: 174 REGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRVKPQRSKVKHHHH 227

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  106 bits (266), Expect = 6e-26
 Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 3/116 (2%)

Query: 692 LLIEHGATVSHQAK---NGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS 748
            ++    +     +   N L  L   A   ++ V    +    +     + G T LH A 
Sbjct: 3   SVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAI 62

Query: 749 HFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
                ++V +L+  GANVN+  + G+TPLH A+     +I   L+  GA   ATT 
Sbjct: 63  CGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTL 118

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 52.6 bits (127), Expect = 9e-08
 Identities = 10/81 (12%), Positives = 23/81 (28%), Gaps = 16/81 (19%)

Query: 756 VRYLVENGANVNATTNLGYTP---LHQASQQGRVLIIDLLLGAGAQPNATTN-----LFC 807
           +R ++    +          P   L  A+  G + ++   +     P+         L  
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHN 60

Query: 808 CAT--------ILVKNGAEID 820
                       L+  GA ++
Sbjct: 61  AICGANYSIVDFLITAGANVN 81

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  161 bits (410), Expect = 3e-46
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 18/169 (10%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
               L  AARA Q D VRIL+ NGA          +PLH+A++ G+     +LL+ G S 
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFTTD-WLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           DA TK   T LH++A EG   +  +L + GA + A      T LH A ++   ++ ++L+
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120

Query: 546 QKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 594
           +                  GA +   +K   T   ++   G   +A++L
Sbjct: 121 KY-----------------GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  160 bits (408), Expect = 6e-46
 Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)

Query: 367 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRG 426
               L  AARA Q D VRIL+ NGA        D                         G
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFTT----DW-----------------------LG 34

Query: 427 ETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVD 486
            +PLHLAA+        +LLR G S DAR + D+TPLH+A+  G+ +I  +LL+HGA V+
Sbjct: 35  TSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVN 94

Query: 487 APTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
           A      TALH + +    EV  +L + GA +   +K   T   ++   G   +A++L
Sbjct: 95  AKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  160 bits (407), Expect = 7e-46
 Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 18/169 (10%)

Query: 525 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK 584
               L  AA+ G+    ++L+   AP                    T   G +PLHLAA+
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPF------------------TTDWLGTSPLHLAAQ 43

Query: 585 YGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTP 644
           YG     ++LL+     D++ K   TPLH+A+   H N+  +LL  GA  +A      T 
Sbjct: 44  YGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTA 103

Query: 645 LHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLL 693
           LH A + N  ++   L++Y A  + +SK   T   +S   G+ D++ +L
Sbjct: 104 LHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  157 bits (401), Expect = 4e-45
 Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 1/153 (0%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN 153
           +    L  AA+   D  VR L++ G   T       +PLH+A ++G  +  E+L+  G +
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 154 IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVL 213
            +A+T+   TPLH AA  GH N++++L++ GA + +K    +  LH A++ +H+    +L
Sbjct: 60  RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL 119

Query: 214 IYHGAGVDEITVDYLTALHVASHCGHVRVAKTL 246
           I +GA V   +    TA  ++   G+  +A+ L
Sbjct: 120 IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  157 bits (400), Expect = 6e-45
 Identities = 57/170 (33%), Positives = 81/170 (47%), Gaps = 18/170 (10%)

Query: 491 DGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAP 550
           D    L  +A+ GQD+   IL  +GA    T   G +PLHLAA+YG     ++LL+    
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPF-TTDWLGTSPLHLAAQYGHFSTTEVLLRA--- 56

Query: 551 VDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVT 610
                         G S  A TK   TPLH+AA  G   I ++LL+  A V+++    +T
Sbjct: 57  --------------GVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMT 102

Query: 611 PLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTL 660
            LH A+ ++HQ V  LL+  GA  H  +K   T   I+      D+A  L
Sbjct: 103 ALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  155 bits (394), Expect = 4e-44
 Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 1/143 (0%)

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
             L  A + G+   V +L++ GA        G +PLH AA+ GH +  ++L+  G +  +
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPF-TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR 249
           +TK    PLHMA+   H     VL+ HGA V+   +  +TALH A+   H  V + L+  
Sbjct: 63  RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122

Query: 250 KADPNARALNGFTPLHIACKKNR 272
            AD + ++    T   I+     
Sbjct: 123 GADVHTQSKFCKTAFDISIDNGN 145

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  150 bits (383), Expect = 1e-42
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 1/153 (0%)

Query: 640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT 699
           +    L  AA+  Q D    L+   A    +   G +PLHL+AQ GH   + +L+  G +
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTTD-WLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 700 VSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
              + K   TPLH+ A E   N+  + + +GA+++       T LH A+      +V  L
Sbjct: 60  RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL 119

Query: 760 VENGANVNATTNLGYTPLHQASQQGRVLIIDLL 792
           ++ GA+V+  +    T    +   G   + ++L
Sbjct: 120 IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  150 bits (381), Expect = 3e-42
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 1/149 (0%)

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
               L  AA+ G+    ++L+   AP       G +PLH+A+ Y H +   +LL  G S 
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60

Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
            A  K   TPLH+AA +   +I   LL++ A  NA+     T LH + +  H ++  LLI
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120

Query: 695 EHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
           ++GA V  Q+K   T   +       ++A
Sbjct: 121 KYGADVHTQSKFCKTAFDISIDNGNEDLA 149

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  148 bits (376), Expect = 1e-41
 Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 9/161 (5%)

Query: 226 DYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAK 285
           D    L  A+  G     + L+   A        G +PLH+A +          H    +
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTTDW-LGTSPLHLAAQYG--------HFSTTE 51

Query: 286 TLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMG 345
            LL      +AR     TPLH+A  +    +VE+LLK+GA + A     +T LH A+   
Sbjct: 52  VLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHN 111

Query: 346 CMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRIL 386
              +   L++ GA   T +   +T   ++      D+  IL
Sbjct: 112 HQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  148 bits (376), Expect = 1e-41
 Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           GQ++  +IL+ NGA        G +PL++AAQ  H      LL  G ++   T+ + TPL
Sbjct: 13  GQDDEVRILMANGAPFTTDW-LGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPL 71

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H+A   G   +VE+L+  GA++ AK    +T LH A    H  V+++LI+ GA +++++K
Sbjct: 72  HMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK 131

Query: 193 NGLAPLHMASQGDHEAATRVL 213
                  ++    +E    +L
Sbjct: 132 FCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  139 bits (354), Expect = 1e-38
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 9/151 (5%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
           +    L  A        +        + L+   A        G +PLH+A +   +   E
Sbjct: 1   DLGKKLLEA--------ARAGQDDEVRILMANGAPFTTDW-LGTSPLHLAAQYGHFSTTE 51

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN 378
           +LL+ G S  A T+   TPLH+A+  G  NI   LL+ GA  +   +   T LH A   N
Sbjct: 52  VLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHN 111

Query: 379 QTDIVRILLRNGASVDARAREDQTPLHVASR 409
             ++V +L++ GA V  +++  +T   ++  
Sbjct: 112 HQEVVELLIKYGADVHTQSKFCKTAFDISID 142

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  131 bits (333), Expect = 8e-36
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 1/131 (0%)

Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEI 733
               L  +A+ G  D   +L+ +GA  +     G +PLHL AQ    +   + +  G   
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60

Query: 734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
           D  TK   TPLH+A+  G  N+V  L+++GA+VNA   L  T LH A++     +++LL+
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120

Query: 794 GAGAQPNATTN 804
             GA  +  + 
Sbjct: 121 KYGADVHTQSK 131

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 84.4 bits (210), Expect = 3e-19
 Identities = 35/183 (19%), Positives = 60/183 (32%), Gaps = 77/183 (42%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
           Q GH     VLL      D + KV    LH+AA +                         
Sbjct: 43  QYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASE------------------------- 77

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                          G   + ++L+ +GA +N + +   T L+ A + NH  V       
Sbjct: 78  ---------------GHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEV------- 115

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI 177
                                     VELLI  GA++  +++   T    +  +G++++ 
Sbjct: 116 --------------------------VELLIKYGADVHTQSKFCKTAFDISIDNGNEDLA 149

Query: 178 DIL 180
           +IL
Sbjct: 150 EIL 152

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  161 bits (410), Expect = 4e-46
 Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 17/175 (9%)

Query: 425 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGAS 484
                L  AA     + +  LL+N  +V+A+    +T L V    GN +IA  LL  GA+
Sbjct: 4   PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN 62

Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
            D   + G+  +H +A+ G  +    L E  A +     +G  PLHLAAK G +++ + L
Sbjct: 63  PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122

Query: 545 LQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA 599
           ++  A                 ++     KG T   LA  YGR ++  ++    A
Sbjct: 123 VKHTAS----------------NVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  158 bits (402), Expect = 4e-45
 Identities = 52/193 (26%), Positives = 79/193 (40%), Gaps = 33/193 (17%)

Query: 572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRG 631
            +     L  AA  G ++    LLQ +  V++Q   G T L V     +  +A  LL RG
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRG 60

Query: 632 ASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSS 691
           A+P    + G+  +H AA+   +D   TLLE+ A  N E   G  PLHL+A+EGH  +  
Sbjct: 61  ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 120

Query: 692 LLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG 751
            L++H A                                + +      G T   +A  +G
Sbjct: 121 FLVKHTA--------------------------------SNVGHRNHKGDTACDLARLYG 148

Query: 752 QLNMVRYLVENGA 764
           +  +V  +  NGA
Sbjct: 149 RNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  156 bits (397), Expect = 2e-44
 Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 10/167 (5%)

Query: 226 DYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAK 285
            +   L  A+  G +    +LL    + NA+   G T L +             +  +A+
Sbjct: 4   PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL---------GNPEIAR 54

Query: 286 TLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMG 345
            LL R A+P+ +   GF  +H A +      ++ LL++ A +      G  PLH+A+  G
Sbjct: 55  RLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEG 114

Query: 346 CMNIAIFLLQAGAA-PDTATVRGETPLHLAARANQTDIVRILLRNGA 391
            + +  FL++  A+       +G+T   LA    + ++V ++  NGA
Sbjct: 115 HLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  154 bits (392), Expect = 1e-43
 Identities = 42/159 (26%), Positives = 60/159 (37%), Gaps = 2/159 (1%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN 153
                L  AA       +  LL    N         T L V  K G   +   L+ +GAN
Sbjct: 4   PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVM-KLGNPEIARRLLLRGAN 62

Query: 154 IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVL 213
            + K R G   +H AAR+G  + +  L+E  A +  +   G  PLH+A++  H      L
Sbjct: 63  PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122

Query: 214 IYHGAG-VDEITVDYLTALHVASHCGHVRVAKTLLDRKA 251
           + H A  V        TA  +A   G   V   +    A
Sbjct: 123 VKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  153 bits (390), Expect = 2e-43
 Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 2/162 (1%)

Query: 637 VAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH 696
           +A+     L  AA +  ++  T+LL+ N   NA++  G T L +  + G+ +++  L+  
Sbjct: 1   MAEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQV-MKLGNPEIARRLLLR 59

Query: 697 GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMV 756
           GA    + + G   +H  A+   ++     +   A+++     G  PLH+A+  G L +V
Sbjct: 60  GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVV 119

Query: 757 RYLVENGA-NVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
            +LV++ A NV    + G T    A   GR  ++ L+   GA
Sbjct: 120 EFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  152 bits (388), Expect = 4e-43
 Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 2/148 (1%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G  E    L+ N   +N Q+  G T L    +  +  + R LL +G N  L        +
Sbjct: 16  GDLEQLTSLLQNNVNVNAQNGFGRTAL-QVMKLGNPEIARRLLLRGANPDLKDRTGFAVI 74

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAA-LYSKT 191
           H A + G +  ++ L+   A++  +  +G  PLH AA+ GH  V++ L++  A+ +  + 
Sbjct: 75  HDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRN 134

Query: 192 KNGLAPLHMASQGDHEAATRVLIYHGAG 219
             G     +A          ++  +GAG
Sbjct: 135 HKGDTACDLARLYGRNEVVSLMQANGAG 162

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  152 bits (388), Expect = 4e-43
 Identities = 37/169 (21%), Positives = 62/169 (36%), Gaps = 10/169 (5%)

Query: 125 TEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKG 184
            E     L  A   G +  +  L+    N+ A+   G T L      G+  +   L+ +G
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRG 60

Query: 185 AALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAK 244
           A    K + G A +H A++       + L+   A V+    +    LH+A+  GH+RV +
Sbjct: 61  ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 120

Query: 245 TLLDRKA-DPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKA 292
            L+   A +   R   G T   +A               V   +    A
Sbjct: 121 FLVKHTASNVGHRNHKGDTACDLARLY--------GRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  150 bits (381), Expect = 3e-42
 Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 10/170 (5%)

Query: 191 TKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRK 250
            +     L  A+          L+ +   V+       TAL V    G+  +A+ LL R 
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRG 60

Query: 251 ADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACK 310
           A+P+ +   GF  +H A        +    +   +TLL+ +AD N     G  PLH+A K
Sbjct: 61  ANPDLKDRTGFAVIHDA--------ARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAK 112

Query: 311 KNRYKVVELLLKYGAS-IAATTESGLTPLHVASFMGCMNIAIFLLQAGAA 359
           +   +VVE L+K+ AS +      G T   +A   G   +   +   GA 
Sbjct: 113 EGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  148 bits (377), Expect = 1e-41
 Identities = 41/178 (23%), Positives = 69/178 (38%), Gaps = 19/178 (10%)

Query: 489 TKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD 548
            +     L  +A  G  E  + L ++  ++ A    G T L +    G  +IA+ LL + 
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLR- 59

Query: 549 APVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNG 608
                           GA+     + GF  +H AA+ G +   Q LL+  A V+ +   G
Sbjct: 60  ----------------GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEG 103

Query: 609 VTPLHVASHYDHQNVALLLLDRGAS-PHAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
             PLH+A+   H  V   L+   AS        G T   +A    + ++ + +    A
Sbjct: 104 NLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  143 bits (364), Expect = 6e-40
 Identities = 49/187 (26%), Positives = 74/187 (39%), Gaps = 28/187 (14%)

Query: 331 TESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNG 390
            E     L  A+  G +     LLQ     +     G T L +       +I R LL  G
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRG 60

Query: 391 ASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGA 450
           A+ D + R                           G   +H AARA   D ++ LL   A
Sbjct: 61  ANPDLKDRT--------------------------GFAVIHDAARAGFLDTLQTLLEFQA 94

Query: 451 SVDARAREDQTPLHVASRLGNGDIASLLLQHGAS-VDAPTKDGYTALHISAKEGQDEVAS 509
            V+    E   PLH+A++ G+  +   L++H AS V      G TA  ++   G++EV S
Sbjct: 95  DVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVS 154

Query: 510 ILTESGA 516
           ++  +GA
Sbjct: 155 LMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  137 bits (348), Expect = 1e-37
 Identities = 42/193 (21%), Positives = 70/193 (36%), Gaps = 36/193 (18%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
                L  A  +          +    +LL    + NA+   G T L +  K    ++  
Sbjct: 4   PWGNELASAAARG--------DLEQLTSLLQNNVNVNAQNGFGRTALQVM-KLGNPEIAR 54

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN 378
            LL  GA+      +G   +H A+  G ++    LL+  A  +     G  PLHLAA+  
Sbjct: 55  RLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEG 114

Query: 379 QTDIVRILLRNGAS-VDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARAN 437
              +V  L+++ AS V  R  +                          G+T   LA    
Sbjct: 115 HLRVVEFLVKHTASNVGHRNHK--------------------------GDTACDLARLYG 148

Query: 438 QTDIVRILLRNGA 450
           + ++V ++  NGA
Sbjct: 149 RNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  130 bits (331), Expect = 2e-35
 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 1/117 (0%)

Query: 71  ATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNIT 130
             G  E+A+ L+  GA  +++   GF  ++ AA+      ++ LL    +  +       
Sbjct: 46  KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNL 105

Query: 131 PLHVACKWGKVAMVELLISKGA-NIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAA 186
           PLH+A K G + +VE L+   A N+  +   G T    A   G + V+ ++   GA 
Sbjct: 106 PLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 74.3 bits (184), Expect = 1e-15
 Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 14/98 (14%)

Query: 736 VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGA 795
           + +     L  A+  G L  +  L++N  NVNA    G T L      G   I   LL  
Sbjct: 1   MAEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLR 59

Query: 796 GAQPNATTN-----LFC--------CATILVKNGAEID 820
           GA P+         +              L++  A+++
Sbjct: 60  GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVN 97

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  155 bits (394), Expect = 5e-44
 Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 7/159 (4%)

Query: 566 ASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVAL 625
            +  ++ +     L  AA  GR++  + LL+  A  ++    G  P+ V        VA 
Sbjct: 3   PAAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAE 61

Query: 626 LLLDRGASPHAVAKNGYT-PLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQE 684
           LLL  GA P+       T P+H AA++  +D    L    A+ +     G  P+ L+ + 
Sbjct: 62  LLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEEL 121

Query: 685 GHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
           GH D++  L             G     + A E   ++ 
Sbjct: 122 GHRDVARYLRAAAGGT-----RGSNHARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  153 bits (390), Expect = 2e-43
 Identities = 39/167 (23%), Positives = 60/167 (35%), Gaps = 24/167 (14%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
               L  AA   + + VR LL  GA+ +A     + P+ V    G+  +A LLL HGA  
Sbjct: 12  SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVAELLLLHGAEP 70

Query: 486 DAPTKDGYT-ALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
           +       T  +H +A+EG  +   +L  +GA +      G  P+ LA + G   +A+ L
Sbjct: 71  NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130

Query: 545 LQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIA 591
                                         G     + A  G   I 
Sbjct: 131 RAAAGGTR----------------------GSNHARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  151 bits (385), Expect = 9e-43
 Identities = 38/163 (23%), Positives = 58/163 (35%), Gaps = 9/163 (5%)

Query: 82  VDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKV 141
           ++  A  +++       L  AA       VR LL  G N      +   P+ V    G  
Sbjct: 1   MEPAAGSSME--PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSA 57

Query: 142 AMVELLISKGANIEAKTRDGLT-PLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHM 200
            + ELL+  GA         LT P+H AAR G  + + +L   GA L  +   G  P+ +
Sbjct: 58  RVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDL 117

Query: 201 ASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVA 243
           A +  H    R L     G             + +  G   + 
Sbjct: 118 AEELGHRDVARYLRAAAGGTRGS-----NHARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  151 bits (383), Expect = 1e-42
 Identities = 37/189 (19%), Positives = 64/189 (33%), Gaps = 35/189 (18%)

Query: 354 LQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRF 413
           ++  A   ++       L  AA   + + VR LL  GA+ +A     + P+ V       
Sbjct: 1   MEPAA--GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM---- 54

Query: 414 SSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQT-PLHVASRLGNG 472
                                      +  +LL +GA  +       T P+H A+R G  
Sbjct: 55  -----------------------GSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFL 91

Query: 473 DIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLA 532
           D   +L + GA +D     G   + ++ + G  +VA  L  +         +G     + 
Sbjct: 92  DTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGT-----RGSNHARID 146

Query: 533 AKYGRMKIA 541
           A  G   I 
Sbjct: 147 AAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  149 bits (378), Expect = 6e-42
 Identities = 32/172 (18%), Positives = 53/172 (30%), Gaps = 17/172 (9%)

Query: 148 ISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHE 207
           +   A   +        L  AA  G    +  L+E GA   +    G  P+ +   G   
Sbjct: 1   MEPAAG--SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMG-SA 57

Query: 208 AATRVLIYHGAGVDEITVDYLT-ALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHI 266
               +L+ HGA  +      LT  +H A+  G +     L    A  + R   G  P+ +
Sbjct: 58  RVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDL 117

Query: 267 ACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
           A +          H  VA+ L                   I   +    + +
Sbjct: 118 AEELG--------HRDVARYLRAAAGGTRGS-----NHARIDAAEGPSDIPD 156

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  149 bits (378), Expect = 7e-42
 Identities = 39/169 (23%), Positives = 62/169 (36%), Gaps = 17/169 (10%)

Query: 216 HGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKS 275
             AG           L  A+  G V   + LL+  A+PNA    G  P+ +         
Sbjct: 3   PAAGSS--MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM------ 54

Query: 276 SHCNHVWVAKTLLDRKADPNARALNGFT-PLHIACKKNRYKVVELLLKYGASIAATTESG 334
                  VA+ LL   A+PN       T P+H A ++     + +L + GA +      G
Sbjct: 55  ---GSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWG 111

Query: 335 LTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIV 383
             P+ +A  +G  ++A +L  A          G     + A    +DI 
Sbjct: 112 RLPVDLAEELGHRDVARYLRAAAGGTR-----GSNHARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  147 bits (373), Expect = 3e-41
 Identities = 44/186 (23%), Positives = 61/186 (32%), Gaps = 33/186 (17%)

Query: 291 KADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIA 350
           +    +        L  A  + R + V  LL+ GA+  A    G  P+ V   MG   +A
Sbjct: 2   EPAAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVA 60

Query: 351 IFLLQAGAAPDTATVRGET-PLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR 409
             LL  GA P+ A     T P+H AAR    D + +L R GA +D R             
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAW---------- 110

Query: 410 LRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRL 469
                           G  P+ LA      D+ R L                   + +  
Sbjct: 111 ----------------GRLPVDLAEELGHRDVARYLRAAAGGTRGS-----NHARIDAAE 149

Query: 470 GNGDIA 475
           G  DI 
Sbjct: 150 GPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  146 bits (372), Expect = 4e-41
 Identities = 41/184 (22%), Positives = 65/184 (35%), Gaps = 31/184 (16%)

Query: 325 ASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVR 384
            +  ++ E     L  A+  G +     LL+AGA P+     G  P+ +        +  
Sbjct: 3   PAAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVAE 61

Query: 385 ILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRI 444
           +LL +GA  +       T                          P+H AAR    D + +
Sbjct: 62  LLLLHGAEPNCADPATLT-------------------------RPVHDAAREGFLDTLVV 96

Query: 445 LLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQ 504
           L R GA +D R    + P+ +A  LG+ D+A  L             G     I A EG 
Sbjct: 97  LHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGT-----RGSNHARIDAAEGP 151

Query: 505 DEVA 508
            ++ 
Sbjct: 152 SDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  144 bits (365), Expect = 4e-40
 Identities = 33/143 (23%), Positives = 47/143 (32%), Gaps = 7/143 (4%)

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
             L  A   G+V  V  L+  GAN  A    G  P+      G   V ++L+  GA    
Sbjct: 14  DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVAELLLLHGAEPNC 72

Query: 190 KTKNGL-APLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLD 248
                L  P+H A++        VL   GA +D         + +A   GH  VA+ L  
Sbjct: 73  ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 132

Query: 249 RKADPNARALNGFTPLHIACKKN 271
                            I   + 
Sbjct: 133 AAGGTRGS-----NHARIDAAEG 150

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  143 bits (363), Expect = 7e-40
 Identities = 36/182 (19%), Positives = 58/182 (31%), Gaps = 35/182 (19%)

Query: 598 DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIA 657
           +    S  +     L  A+          LL+ GA+P+A    G  P+ +        +A
Sbjct: 2   EPAAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVA 60

Query: 658 TTLLEYNAKPNAESKAGFT-PLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQ 716
             LL + A+PN    A  T P+H +A+EG  D   +L   GA                  
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGA------------------ 102

Query: 717 EDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTP 776
                           +D     G  P+ +A   G  ++ RYL         + +     
Sbjct: 103 ---------------RLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDA 147

Query: 777 LH 778
             
Sbjct: 148 AE 149

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  143 bits (362), Expect = 8e-40
 Identities = 36/161 (22%), Positives = 57/161 (35%), Gaps = 15/161 (9%)

Query: 250 KADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIAC 309
           +    +        L  A  +          V   + LL+  A+PNA    G  P+ +  
Sbjct: 2   EPAAGSSMEPSADWLATAAAR--------GRVEEVRALLEAGANPNAPNSYGRRPIQVMM 53

Query: 310 KKNRYKVVELLLKYGASIAATTESGLT-PLHVASFMGCMNIAIFLLQAGAAPDTATVRGE 368
                +V ELLL +GA       + LT P+H A+  G ++  + L +AGA  D     G 
Sbjct: 54  -MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGR 112

Query: 369 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR 409
            P+ LA      D+ R L                   + + 
Sbjct: 113 LPVDLAEELGHRDVARYLRAAAGGTRGS-----NHARIDAA 148

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  139 bits (354), Expect = 1e-38
 Identities = 35/178 (19%), Positives = 61/178 (34%), Gaps = 35/178 (19%)

Query: 628 LDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHT 687
           ++  A   +  +     L  AA + +++    LLE  A PNA +  G  P+ +    G  
Sbjct: 1   MEPAAG--SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSA 57

Query: 688 DMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIA 747
            ++ LL+ HGA  +      LT                                 P+H A
Sbjct: 58  RVAELLLLHGAEPNCADPATLT--------------------------------RPVHDA 85

Query: 748 SHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNL 805
           +  G L+ +  L   GA ++     G  P+  A + G   +   L  A      + + 
Sbjct: 86  AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHA 143

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  135 bits (343), Expect = 4e-37
 Identities = 28/128 (21%), Positives = 47/128 (36%), Gaps = 2/128 (1%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNIT-P 131
           G+ E  + L++ GA  N  +  G  P+ +        V   LL  G     A    +T P
Sbjct: 23  GRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVAELLLLHGAEPNCADPATLTRP 81

Query: 132 LHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKT 191
           +H A + G +  + +L   GA ++ +   G  P+  A   GH +V   L           
Sbjct: 82  VHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSN 141

Query: 192 KNGLAPLH 199
              +    
Sbjct: 142 HARIDAAE 149

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  108 bits (273), Expect = 9e-28
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 6/109 (5%)

Query: 71  ATGQEEVAKILVDNGATINVQSLNGFT-PLYMAAQENHDGVVRYLLSKGGNQTLATEHNI 129
             G   VA++L+ +GA  N       T P++ AA+E     +  L   G    +      
Sbjct: 53  MMGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGR 112

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVID 178
            P+ +A + G   +   L +                   A  G  ++ D
Sbjct: 113 LPVDLAEELGHRDVARYLRAAAGGTRGS-----NHARIDAAEGPSDIPD 156

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 69.8 bits (172), Expect = 3e-14
 Identities = 24/150 (16%), Positives = 42/150 (28%), Gaps = 54/150 (36%)

Query: 3   QGHDRVVAVLLEN-------DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSL 55
            G  RV  +LL +       D         +H AA++                       
Sbjct: 54  MGSARVAELLLLHGAEPNCADPATLT--RPVHDAARE----------------------- 88

Query: 56  SNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLL 115
                            G  +   +L   GA ++V+   G  P+ +A +  H  V RYL 
Sbjct: 89  -----------------GFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 131

Query: 116 SKGGNQTLATEHNITPLHVACKWGKVAMVE 145
           +  G    +         +    G   + +
Sbjct: 132 AAAGGTRGS-----NHARIDAAEGPSDIPD 156

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  153 bits (390), Expect = 6e-44
 Identities = 53/125 (42%), Positives = 82/125 (65%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN 153
           NG TPL++AA+  H  VV+ LL  G +     ++  TPLH+A + G + +V+LL+  GA+
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 154 IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVL 213
           + AK ++G TPLH AAR+GH  V+ +L+E GA + +K KNG  PLH+A++  H    ++L
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 120

Query: 214 IYHGA 218
           +  GA
Sbjct: 121 LEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  148 bits (376), Expect = 6e-42
 Identities = 57/124 (45%), Positives = 86/124 (69%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
           G TPLHLAAR    ++V++LL  GA V+A+ +  +TPLH+A+R G+ ++  LLL+ GA V
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           +A  K+G T LH++A+ G  EV  +L E+GA + A  K G TPLHLAA+ G +++ ++LL
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121

Query: 546 QKDA 549
           +  A
Sbjct: 122 EAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  144 bits (365), Expect = 2e-40
 Identities = 59/124 (47%), Positives = 84/124 (67%)

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
           G TPLHLAA+ G +++ ++LL+  A V+++ KNG TPLH+A+   H  V  LLL+ GA  
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
           +A  KNG TPLH+AA+   +++   LLE  A  NA+ K G TPLHL+A+ GH ++  LL+
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121

Query: 695 EHGA 698
           E GA
Sbjct: 122 EAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  142 bits (361), Expect = 6e-40
 Identities = 49/113 (43%), Positives = 75/113 (66%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G  EV K+L++ GA +N +  NG TPL++AA+  H  VV+ LL  G +     ++  TPL
Sbjct: 13  GHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPL 72

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGA 185
           H+A + G + +V+LL+  GA++ AK ++G TPLH AAR+GH  V+ +L+E GA
Sbjct: 73  HLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  141 bits (358), Expect = 2e-39
 Identities = 52/122 (42%), Positives = 80/122 (65%)

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
           TPLH+A + G + +V+LL+  GA++ AK ++G TPLH AAR+GH  V+ +L+E GA + +
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR 249
           K KNG  PLH+A++  H    ++L+  GA V+    +  T LH+A+  GH+ V K LL+ 
Sbjct: 64  KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123

Query: 250 KA 251
            A
Sbjct: 124 GA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  135 bits (344), Expect = 1e-37
 Identities = 57/142 (40%), Positives = 85/142 (59%), Gaps = 17/142 (11%)

Query: 491 DGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAP 550
           +G T LH++A+ G  EV  +L E+GA + A  K G TPLHLAA+ G +++ ++LL+    
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA--- 57

Query: 551 VDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVT 610
                         GA + A  K G TPLHLAA+ G +++ ++LL+  A V+++ KNG T
Sbjct: 58  --------------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT 103

Query: 611 PLHVASHYDHQNVALLLLDRGA 632
           PLH+A+   H  V  LLL+ GA
Sbjct: 104 PLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  134 bits (340), Expect = 4e-37
 Identities = 57/133 (42%), Positives = 80/133 (60%), Gaps = 8/133 (6%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
           NG TPLH+A +          H+ V K LL+  AD NA+  NG TPLH+A +    +VV+
Sbjct: 1   NGRTPLHLAARNG--------HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVK 52

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN 378
           LLL+ GA + A  ++G TPLH+A+  G + +   LL+AGA  +     G TPLHLAAR  
Sbjct: 53  LLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 112

Query: 379 QTDIVRILLRNGA 391
             ++V++LL  GA
Sbjct: 113 HLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  133 bits (338), Expect = 7e-37
 Identities = 59/158 (37%), Positives = 82/158 (51%), Gaps = 33/158 (20%)

Query: 607 NGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK 666
           NG TPLH+A+   H  V  LLL+ GA  +A  KNG TPLH+AA+   +++   LLE  A 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 667 PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATIT 726
            NA+ K G TPLHL+A+ GH ++  LL+E                               
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEA------------------------------ 90

Query: 727 MFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA 764
              GA+++   K G TPLH+A+  G L +V+ L+E GA
Sbjct: 91  ---GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  133 bits (337), Expect = 9e-37
 Identities = 56/140 (40%), Positives = 86/140 (61%), Gaps = 17/140 (12%)

Query: 460 QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASIT 519
           +TPLH+A+R G+ ++  LLL+ GA V+A  K+G T LH++A+ G  EV  +L E+GA + 
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62

Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPL 579
           A  K G TPLHLAA+ G +++ ++LL+                  GA + A  K G TPL
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEA-----------------GADVNAKDKNGRTPL 105

Query: 580 HLAAKYGRMKIAQMLLQKDA 599
           HLAA+ G +++ ++LL+  A
Sbjct: 106 HLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  132 bits (335), Expect = 2e-36
 Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 17/141 (12%)

Query: 525 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK 584
           G TPLHLAA+ G +++ ++LL+                  GA + A  K G TPLHLAA+
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEA-----------------GADVNAKDKNGRTPLHLAAR 44

Query: 585 YGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTP 644
            G +++ ++LL+  A V+++ KNG TPLH+A+   H  V  LLL+ GA  +A  KNG TP
Sbjct: 45  NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTP 104

Query: 645 LHIAAKKNQMDIATTLLEYNA 665
           LH+AA+   +++   LLE  A
Sbjct: 105 LHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  132 bits (334), Expect = 2e-36
 Identities = 63/166 (37%), Positives = 85/166 (51%), Gaps = 41/166 (24%)

Query: 160 DGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAG 219
           +G TPLH AAR+GH  V+ +L+E GA + +K KNG                         
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG------------------------- 35

Query: 220 VDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCN 279
                    T LH+A+  GH+ V K LL+  AD NA+  NG TPLH+A +          
Sbjct: 36  --------RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN--------G 79

Query: 280 HVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGA 325
           H+ V K LL+  AD NA+  NG TPLH+A +    +VV+LLL+ GA
Sbjct: 80  HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  130 bits (329), Expect = 1e-35
 Identities = 57/151 (37%), Positives = 82/151 (54%), Gaps = 26/151 (17%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA 359
           NG TPLH+A +    +VV+LLL+ GA + A  ++G TPLH+A+  G + +   LL+AGA 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 360 PDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQS 419
            +     G TPLHLAAR    ++V++LL  GA V+A+ +                     
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-------------------- 100

Query: 420 ALTRVRGETPLHLAARANQTDIVRILLRNGA 450
                 G TPLHLAAR    ++V++LL  GA
Sbjct: 101 ------GRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  107 bits (270), Expect = 1e-27
 Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 33/131 (25%)

Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEI 733
           G TPLHL+A+ GH ++  LL+E GA                                 ++
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGA---------------------------------DV 28

Query: 734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
           +   K G TPLH+A+  G L +V+ L+E GA+VNA    G TPLH A++ G + ++ LLL
Sbjct: 29  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88

Query: 794 GAGAQPNATTN 804
            AGA  NA   
Sbjct: 89  EAGADVNAKDK 99

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  153 bits (388), Expect = 6e-43
 Identities = 39/192 (20%), Positives = 64/192 (33%), Gaps = 22/192 (11%)

Query: 514 SGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTK 573
           +    + T  +G     +  K G            A V                      
Sbjct: 3   NKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV--------------------S 42

Query: 574 KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGAS 633
           +  TP   AA+    +    LL +D  VD+  +NG T L   +         LL + GA 
Sbjct: 43  EYETPWWTAARKADEQALSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD 101

Query: 634 PHAV-AKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSL 692
                 + G T LH+AA   + ++   L+E  A    E + G T L L+ +   T     
Sbjct: 102 LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGN 161

Query: 693 LIEHGATVSHQA 704
            ++ G  +  + 
Sbjct: 162 PMQFGRRIGLEK 173

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  153 bits (388), Expect = 7e-43
 Identities = 45/199 (22%), Positives = 68/199 (34%), Gaps = 32/199 (16%)

Query: 366 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVR 425
            G     +  +   +          A V +                              
Sbjct: 13  EGAMEYLIEWKDGHSPSWVPSSYIAADVVSE----------------------------- 43

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
            ETP   AAR      +  LL     VDA     +T L   + LG+     LL + GA +
Sbjct: 44  YETPWWTAARKADEQALSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL 102

Query: 486 DAP-TKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
           D    + G TALH++A   + EV   L E GA I    ++G T L LA +  +       
Sbjct: 103 DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNP 162

Query: 545 LQKDAPVDSQGKVASILTE 563
           +Q    +  + KV ++L  
Sbjct: 163 MQFGRRIGLE-KVINVLEG 180

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  151 bits (384), Expect = 2e-42
 Identities = 33/173 (19%), Positives = 57/173 (32%), Gaps = 5/173 (2%)

Query: 84  NGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAM 143
           N    +  +  G     +  ++ H            +         TP   A +      
Sbjct: 3   NKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAAD---VVSEYETPWWTAARKADEQA 59

Query: 144 VELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSK-TKNGLAPLHMAS 202
           +  L+ +  +++A   +G T L   A  G D  + +L E GA L  +  + GL  LHMA+
Sbjct: 60  LSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118

Query: 203 QGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNA 255
                     L+  GA ++      LTAL +A            +        
Sbjct: 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGL 171

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  151 bits (383), Expect = 3e-42
 Identities = 34/181 (18%), Positives = 57/181 (31%), Gaps = 13/181 (7%)

Query: 150 KGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAA 209
                     +G        + GH           A           P   A++   E A
Sbjct: 3   NKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAA---DVVSEYETPWWTAARKADEQA 59

Query: 210 TRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALN-GFTPLHIAC 268
              L+     VD +  +  TAL   +  G  +  + L +  AD + R +  G T LH+A 
Sbjct: 60  LSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118

Query: 269 KKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIA 328
                         V + L++  AD       G T L +A +  +       +++G  I 
Sbjct: 119 GYV--------RPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIG 170

Query: 329 A 329
            
Sbjct: 171 L 171

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  149 bits (378), Expect = 2e-41
 Identities = 41/198 (20%), Positives = 61/198 (30%), Gaps = 36/198 (18%)

Query: 604 QGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEY 663
               G     +     H    +      A    V     TP   AA+K      + LLE 
Sbjct: 10  TAGEGAMEYLIEWKDGHSPSWVPSSYIAAD---VVSEYETPWWTAARKADEQALSQLLE- 65

Query: 664 NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
           +   +A  + G T L   A  G      LL E GA + H+   G                
Sbjct: 66  DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG---------------- 109

Query: 724 TITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQ 783
                           G T LH+A+ + +  +V  LVE GA++      G T L  A + 
Sbjct: 110 ----------------GLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI 153

Query: 784 GRVLIIDLLLGAGAQPNA 801
            +       +  G +   
Sbjct: 154 LKTTPKGNPMQFGRRIGL 171

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  147 bits (374), Expect = 5e-41
 Identities = 37/216 (17%), Positives = 69/216 (31%), Gaps = 39/216 (18%)

Query: 482 GASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIA 541
                    +G     I  K+G        +   A + +   +  TP   AA+    +  
Sbjct: 4   KIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS---EYETPWWTAARKADEQAL 60

Query: 542 QMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPV 601
             LL                      + A  + G T L   A  G  K  ++L +  A +
Sbjct: 61  SQLL------------------EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL 102

Query: 602 DSQ-GKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTL 660
           D +  + G+T LH+A+ Y    V   L++ GA      + G T L +A +  +       
Sbjct: 103 DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNP 162

Query: 661 LEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH 696
           +++                   + G   + ++L   
Sbjct: 163 MQF-----------------GRRIGLEKVINVLEGQ 181

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  147 bits (373), Expect = 7e-41
 Identities = 45/208 (21%), Positives = 69/208 (33%), Gaps = 31/208 (14%)

Query: 182 EKGAALYSKT-KNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHV 240
           E    + S+T   G     +  +  H  +     Y  A V     +Y T    A+     
Sbjct: 1   EVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS---EYETPWWTAARKADE 57

Query: 241 RVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALN 300
           +    LL+   D +A   NG T L                    + L +  AD + R + 
Sbjct: 58  QALSQLLE-DRDVDAVDENGRTALLFVAGLG--------SDKCVRLLAEAGADLDHRDMR 108

Query: 301 -GFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA 359
            G T LH+A    R +VVE L++ GA I    E GLT L +A  +               
Sbjct: 109 GGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPK--------- 159

Query: 360 PDTATVRGETPLHLAARANQTDIVRILL 387
                     P+    R     ++ +L 
Sbjct: 160 --------GNPMQFGRRIGLEKVINVLE 179

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  146 bits (372), Expect = 1e-40
 Identities = 38/197 (19%), Positives = 56/197 (28%), Gaps = 29/197 (14%)

Query: 291 KADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIA 350
           K   +  A  G     I  K              A + +      TP   A+        
Sbjct: 4   KIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSE---YETPWWTAARKADEQAL 60

Query: 351 IFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRL 410
             LL+     D     G T L   A       VR+L   GA +D R              
Sbjct: 61  SQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG---------- 109

Query: 411 RRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLG 470
                          G T LH+AA   + ++V  L+  GA ++       T L +A  + 
Sbjct: 110 ---------------GLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL 154

Query: 471 NGDIASLLLQHGASVDA 487
                   +Q G  +  
Sbjct: 155 KTTPKGNPMQFGRRIGL 171

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  145 bits (369), Expect = 3e-40
 Identities = 34/195 (17%), Positives = 60/195 (30%), Gaps = 30/195 (15%)

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
               +  K G            A++ ++     TP   AAR   +  +  L+E    + +
Sbjct: 16  MEYLIEWKDGHSPSWVPSSYIAADVVSE---YETPWWTAARKADEQALSQLLE-DRDVDA 71

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDY-LTALHVASHCGHVRVAKTLLD 248
             +NG   L   +    +   R+L   GA +D   +   LTALH+A+      V + L++
Sbjct: 72  VDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVE 131

Query: 249 RKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIA 308
             AD       G T L +A +                  +                    
Sbjct: 132 LGADIEVEDERGLTALELAREIL--------KTTPKGNPMQFGRRIGLEK---------- 173

Query: 309 CKKNRYKVVELLLKY 323
                  V+ +L   
Sbjct: 174 -------VINVLEGQ 181

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  144 bits (367), Expect = 5e-40
 Identities = 40/225 (17%), Positives = 65/225 (28%), Gaps = 48/225 (21%)

Query: 324 GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIV 383
               + T   G     +    G     +      A   +     ETP   AAR      +
Sbjct: 4   KIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS---EYETPWWTAARKADEQAL 60

Query: 384 RILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVR 443
             LL     VDA                              G T L   A       VR
Sbjct: 61  SQLL-EDRDVDAVDEN--------------------------GRTALLFVAGLGSDKCVR 93

Query: 444 ILLRNGASVDARARED-QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKE 502
           +L   GA +D R      T LH+A+     ++   L++ GA ++   + G TAL ++ + 
Sbjct: 94  LLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI 153

Query: 503 GQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 547
            +                        +    + G  K+  +L  +
Sbjct: 154 LKTTPKGNP-----------------MQFGRRIGLEKVINVLEGQ 181

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  144 bits (366), Expect = 6e-40
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 5/151 (3%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G            A +        TP + AA++  +  +  LL +  +     E+  T L
Sbjct: 25  GHSPSWVPSSYIAADVVS---EYETPWWTAARKADEQALSQLL-EDRDVDAVDENGRTAL 80

Query: 133 HVACKWGKVAMVELLISKGANIEAK-TRDGLTPLHCAARSGHDNVIDILIEKGAALYSKT 191
                 G    V LL   GA+++ +  R GLT LH AA      V++ L+E GA +  + 
Sbjct: 81  LFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVED 140

Query: 192 KNGLAPLHMASQGDHEAATRVLIYHGAGVDE 222
           + GL  L +A +          +  G  +  
Sbjct: 141 ERGLTALELAREILKTTPKGNPMQFGRRIGL 171

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  141 bits (358), Expect = 8e-39
 Identities = 37/216 (17%), Positives = 70/216 (32%), Gaps = 37/216 (17%)

Query: 448 NGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEV 507
           N       A E      +  + G+           A V +   +  T    +A++  ++ 
Sbjct: 3   NKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS---EYETPWWTAARKADEQA 59

Query: 508 ASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGAS 567
            S L E    + A  + G T L   A  G  K  ++L +  A +D +             
Sbjct: 60  LSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRD------------ 106

Query: 568 ITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLL 627
                + G T LH+AA Y R ++ + L++  A ++ + + G+T L +A            
Sbjct: 107 ----MRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNP 162

Query: 628 LDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEY 663
           +  G                  +     +   L   
Sbjct: 163 MQFGR-----------------RIGLEKVINVLEGQ 181

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  115 bits (291), Expect = 7e-30
 Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 5/138 (3%)

Query: 668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM 727
           +  +  G     +  ++GH+          A V        TP    A++      +  +
Sbjct: 8   SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV---SEYETPWWTAARKADEQALSQ-L 63

Query: 728 FNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNAT-TNLGYTPLHQASQQGRV 786
               ++D V + G T L   +  G    VR L E GA+++      G T LH A+   R 
Sbjct: 64  LEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRP 123

Query: 787 LIIDLLLGAGAQPNATTN 804
            +++ L+  GA       
Sbjct: 124 EVVEALVELGADIEVEDE 141

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 88.7 bits (221), Expect = 2e-20
 Identities = 28/160 (17%), Positives = 53/160 (33%), Gaps = 44/160 (27%)

Query: 2   QQGHDRVVAVLLEN---DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNT 58
           ++  ++ ++ LLE+   D   +    AL   A                            
Sbjct: 53  RKADEQALSQLLEDRDVDAVDENGRTALLFVAGL-------------------------- 86

Query: 59  KLEVSLSNTKFEATGQEEVAKILVDNGATINVQ-SLNGFTPLYMAAQENHDGVVRYLLSK 117
                         G ++  ++L + GA ++ +    G T L+MAA      VV  L+  
Sbjct: 87  --------------GSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL 132

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAK 157
           G +  +  E  +T L +A +  K       +  G  I  +
Sbjct: 133 GADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLE 172

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 84.9 bits (211), Expect = 4e-19
 Identities = 27/138 (19%), Positives = 45/138 (32%), Gaps = 18/138 (13%)

Query: 697 GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMV 756
               S  A  G     +  ++        + +  A++        TP   A+       +
Sbjct: 4   KIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV---SEYETPWWTAARKADEQAL 60

Query: 757 RYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT------TNLFC--- 807
             L+E   +V+A    G T L   +  G    + LL  AGA  +        T L     
Sbjct: 61  SQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119

Query: 808 -----CATILVKNGAEID 820
                    LV+ GA+I+
Sbjct: 120 YVRPEVVEALVELGADIE 137

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  159 bits (403), Expect = 7e-43
 Identities = 51/395 (12%), Positives = 101/395 (25%), Gaps = 45/395 (11%)

Query: 13  LENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTK-LEVSLSNTKFEA 71
            END + ++    L     +    A  L L        + + L  TK +E          
Sbjct: 12  YENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYY 71

Query: 72  TGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITP 131
                 AK L  +     ++S        +    +    +  LL+      +    N   
Sbjct: 72  AHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQA 131

Query: 132 LHVACKWGKVAMVELLISKGANIEA--KTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
             +A + G + ++  L              +       AA +GH +V++ L E      +
Sbjct: 132 FRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEAT 191

Query: 190 KT---KNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTL 246
                +N  A    A    H      L+     +         A       G   V   +
Sbjct: 192 AMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA-------YAEIHEFEYGEKYVNPFI 244

Query: 247 LDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLH 306
                              ++               +            +  L GF  L 
Sbjct: 245 ARHVNRLKE----MHDAFKLSNPD--------GVFDLVT---------KSECLQGFYMLR 283

Query: 307 IACKKNRYKVVELL--------LKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGA 358
              ++N   +++ +        +K  A  A         L +A  +G       LL   +
Sbjct: 284 NLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPS 343

Query: 359 APDTATVRGETPLHLAARANQTDIVRILLRNGASV 393
                        ++     + D+  + L +    
Sbjct: 344 VLALTK---ANNYYINETGGRLDLRAVALEHHHHH 375

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  150 bits (381), Expect = 6e-40
 Identities = 44/377 (11%), Positives = 95/377 (25%), Gaps = 56/377 (14%)

Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDI-ASLLLQHGASVDAPTKDG 492
              +  + + I L    +++      Q    +     + +  A  L          ++  
Sbjct: 42  MTLSYKEAIHIFLPGTKNME------QVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVI 95

Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
                I+      +   +L  S   +     + +    LAA+ G + +   L +      
Sbjct: 96  CFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEI 155

Query: 553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPV---DSQGKNGV 609
                                + +    LAA+ G + +   L +          Q +N  
Sbjct: 156 MAMI---------------QAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYY 200

Query: 610 TPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNA 669
                A    H NV   LLD          + +                    + A+   
Sbjct: 201 AFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNP-----------FIARHVN 249

Query: 670 ESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQED--------KVN 721
             K       LS  +G  D+ +           +   G   L    + +        +  
Sbjct: 250 RLKEMHDAFKLSNPDGVFDLVT---------KSECLQGFYMLRNLIRRNDEVLLDDIRFL 300

Query: 722 VATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQAS 781
           ++   +   A    +       L +A   G       L+   + +  T        +   
Sbjct: 301 LSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTKA---NNYYINE 357

Query: 782 QQGRVLIIDLLLGAGAQ 798
             GR+ +  + L     
Sbjct: 358 TGGRLDLRAVALEHHHH 374

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  150 bits (381), Expect = 7e-40
 Identities = 39/298 (13%), Positives = 87/298 (29%), Gaps = 33/298 (11%)

Query: 424 VRGETPLHLAARA---NQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQ 480
           ++ E    +AA     +  D + +LL +   V     E+     +A+  G+  + + L +
Sbjct: 90  IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCE 149

Query: 481 HGASVDAPTK--DGYTALHISAKEGQDEVASILTESGASITATT--KKGFTPLHLAA-KY 535
              +        + Y A  ++A+ G   V + L E   +        + +     AA   
Sbjct: 150 LAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGR 209

Query: 536 GRMKIAQMLLQKDAPVDSQGKVAS-----ILTESGASITATTKKGFTPLHLAAKYGRMKI 590
           G   +   LL     +              +    A      K+      L+   G   +
Sbjct: 210 GHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDL 269

Query: 591 AQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNV--------ALLLLDRGASPHAVAKNGY 642
                       S+   G   L      + + +        ++  +   A    +  +  
Sbjct: 270 VT---------KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDAN 320

Query: 643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATV 700
             L +A +         LL   +             +++   G  D+ ++ +EH    
Sbjct: 321 ELLRLALRLGNQGACALLLSIPSVLALTKA---NNYYINETGGRLDLRAVALEHHHHH 375

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  145 bits (367), Expect = 4e-38
 Identities = 44/382 (11%), Positives = 100/382 (26%), Gaps = 55/382 (14%)

Query: 269 KKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIA 328
             N       ++       L      N   +     L+ A   +  +  + L        
Sbjct: 35  SANELSLMTLSYKEAIHIFLPGTK--NMEQVRQLLCLYYA---HYNRNAKQLWSDAHKKG 89

Query: 329 ATTESGLTPLHVASFMGCMN---IAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRI 385
             +E       VA+  GC +       LL +                LAA      ++  
Sbjct: 90  IKSE---VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNR 146

Query: 386 LLRNGASVDAR--AREDQTPLHVASR---------LRRFSSASQSALTRVRGETPLHLAA 434
           L     +        E+     +A+          L   +    +A+ +         AA
Sbjct: 147 LCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAA 206

Query: 435 RAN-QTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
                 +++  LL     +                 G   +   + +H   +    K+ +
Sbjct: 207 VGRGHHNVINFLLDCPVMLAYAEIH-------EFEYGEKYVNPFIARHVNRL----KEMH 255

Query: 494 TALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS 553
            A  +S  +G  ++ +          +   +GF  L    +     +   +         
Sbjct: 256 DAFKLSNPDGVFDLVT---------KSECLQGFYMLRNLIRRNDEVLLDDI--------- 297

Query: 554 QGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLH 613
           +  ++    ++ A            L LA + G      +LL   + +     N     +
Sbjct: 298 RFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTKANN---YY 354

Query: 614 VASHYDHQNVALLLLDRGASPH 635
           +       ++  + L+     H
Sbjct: 355 INETGGRLDLRAVALEHHHHHH 376

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  138 bits (349), Expect = 9e-36
 Identities = 36/270 (13%), Positives = 71/270 (26%), Gaps = 26/270 (9%)

Query: 561 LTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDH 620
           L          ++       +      +    +LL  D  V            +A+   H
Sbjct: 81  LWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGH 140

Query: 621 QNVALLLLDRGASPHA--VAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE--SKAGFT 676
            +V   L +   +     +    Y    +AA+   + +   L E              + 
Sbjct: 141 LHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYY 200

Query: 677 PLHLSAQE-GHTDMSSLLIEHGATVSHQAKNGLTPLHLC-----AQEDKVNVATITMFNG 730
               +A   GH ++ + L++    +++   +             A+           F  
Sbjct: 201 AFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKL 260

Query: 731 AEIDPVT--------KAGFTPLHIAS---HFGQLNMVRYL-----VENGANVNATTNLGY 774
           +  D V           GF  L           L+ +R+L     ++  A          
Sbjct: 261 SNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDAN 320

Query: 775 TPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
             L  A + G      LLL   +    T  
Sbjct: 321 ELLRLALRLGNQGACALLLSIPSVLALTKA 350

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  100 bits (250), Expect = 8e-23
 Identities = 34/273 (12%), Positives = 68/273 (24%), Gaps = 45/273 (16%)

Query: 568 ITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVAS---HYDHQNVA 624
           +  T         L   Y         L  D     +G        VA+        +  
Sbjct: 54  LPGTKNMEQVRQLLCLYYAHYNRNAKQLWSD--AHKKGIKSEVICFVAAITGCSSALDTL 111

Query: 625 LLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKA--GFTPLHLSA 682
            LLL        +    Y    +AA+   + +   L E              +    L+A
Sbjct: 112 CLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAA 171

Query: 683 QEGHTDMSSLLIEHGATVSH---QAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKA 739
           + GH  + + L E   T +    QA+N              NV    +     +      
Sbjct: 172 ENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA----- 226

Query: 740 GFTPLHIASHFGQLNMVRYLVENGANVNATTN--------------------LGYTPLHQ 779
                     +G+  +  ++  +   +    +                     G+  L  
Sbjct: 227 --YAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRN 284

Query: 780 ASQQGRVLIIDLL--------LGAGAQPNATTN 804
             ++   +++D +        + A A       
Sbjct: 285 LIRRNDEVLLDDIRFLLSIPGIKALAPTATIPG 317

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 66.9 bits (163), Expect = 7e-12
 Identities = 29/193 (15%), Positives = 54/193 (27%), Gaps = 34/193 (17%)

Query: 1   MQQGHDRVVAVLLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKL 60
           + +GH  V+  LL+               A  +  +       V               +
Sbjct: 207 VGRGHHNVINFLLDCPVM----------LAYAEIHEFEYGEKYV--------NPFIARHV 248

Query: 61  EVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDG---VVRYLLSK 117
                          +    LV        + L GF  L    + N +     +R+LLS 
Sbjct: 249 NRLKEMHDAFKLSNPDGVFDLVTKS-----ECLQGFYMLRNLIRRNDEVLLDDIRFLLSI 303

Query: 118 GGNQTLA-----TEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSG 172
            G + LA            L +A + G      LL+S  + +     +     +     G
Sbjct: 304 PGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTKANN---YYINETGG 360

Query: 173 HDNVIDILIEKGA 185
             ++  + +E   
Sbjct: 361 RLDLRAVALEHHH 373

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 61.1 bits (148), Expect = 5e-10
 Identities = 19/159 (11%), Positives = 45/159 (28%), Gaps = 21/159 (13%)

Query: 2   QQGHDRVVAVLLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLE 61
           + G   V   +  +  + K    A  ++           + ++    TK E       L 
Sbjct: 234 EYGEKYVNPFIARHVNRLKEMHDAFKLSNPDG-------VFDL---VTKSECLQGFYMLR 283

Query: 62  VSLSNTKFEATGQEEVAKIL-----VDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLS 116
             +           +  + L     +   A       +    L +A +  + G    LLS
Sbjct: 284 NLIRR---NDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLS 340

Query: 117 KGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIE 155
                 L   +N    ++    G++ +  + +    +  
Sbjct: 341 IPSVLALTKANN---YYINETGGRLDLRAVALEHHHHHH 376

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 55.7 bits (134), Expect = 3e-08
 Identities = 12/121 (9%), Positives = 36/121 (29%), Gaps = 5/121 (4%)

Query: 682 AQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGF 741
               + +   + +    T + +    L  L+  A  ++      +  +  +    ++   
Sbjct: 42  MTLSYKEAIHIFLP--GTKNMEQVRQLLCLY-YAHYNRNAKQLWS--DAHKKGIKSEVIC 96

Query: 742 TPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA 801
               I      L+ +  L+ +   V       Y     A++ G + +++ L         
Sbjct: 97  FVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM 156

Query: 802 T 802
            
Sbjct: 157 A 157

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  147 bits (375), Expect = 9e-42
 Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 2/126 (1%)

Query: 425 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGAS 484
             +  L  AA   Q + VR LL  GA  +A  R  + P+ V    G+  +A LLL HGA 
Sbjct: 11  SSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE 69

Query: 485 VDAPTKDGYT-ALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQM 543
            +       T  +H +A+EG  +   +L  +GA +      G  P+ LA + G   IA+ 
Sbjct: 70  PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARY 129

Query: 544 LLQKDA 549
           L     
Sbjct: 130 LHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  144 bits (367), Expect = 1e-40
 Identities = 35/135 (25%), Positives = 49/135 (36%), Gaps = 2/135 (1%)

Query: 85  GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMV 144
              I++   +    L  AA       VR LL  G +          P+ V    G   + 
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVA 60

Query: 145 ELLISKGANIEAKTRDGLT-PLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQ 203
           ELL+  GA         LT P+H AAR G  + + +L   GA L      G  P+ +A +
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEE 120

Query: 204 GDHEAATRVLIYHGA 218
             H    R L     
Sbjct: 121 QGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  142 bits (362), Expect = 6e-40
 Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 2/135 (1%)

Query: 565 GASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVA 624
              I          L  AA  G+++  + LL+  A  ++  + G  P+ V        VA
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMM-MGSAQVA 60

Query: 625 LLLLDRGASPHAVAKNGYT-PLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQ 683
            LLL  GA P+       T P+H AA++  +D    L    A+ +     G  P+ L+ +
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEE 120

Query: 684 EGHTDMSSLLIEHGA 698
           +GH D++  L     
Sbjct: 121 QGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  141 bits (358), Expect = 2e-39
 Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 28/162 (17%)

Query: 356 AGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSS 415
                       +  L  AA   Q + VR LL  GA  +A  R  + P+ V         
Sbjct: 1   GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM------ 54

Query: 416 ASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQT-PLHVASRLGNGDI 474
                                    +  +LL +GA  +       T P+H A+R G  D 
Sbjct: 55  ---------------------GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDT 93

Query: 475 ASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGA 516
             +L + GA +D     G   + ++ ++G  ++A  L  +  
Sbjct: 94  LVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  139 bits (353), Expect = 8e-39
 Identities = 30/144 (20%), Positives = 49/144 (34%), Gaps = 10/144 (6%)

Query: 151 GANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAAT 210
              I          L  AA  G    +  L+E GA   +  + G  P+ +   G      
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMG-SAQVA 60

Query: 211 RVLIYHGAGVDEITVDYLT-ALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACK 269
            +L+ HGA  +      LT  +H A+  G +     L    A  +     G  P+ +A +
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEE 120

Query: 270 KNRYKSSHCNHVWVAKTLLDRKAD 293
           +         H  +A+ L     D
Sbjct: 121 Q--------GHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  139 bits (353), Expect = 9e-39
 Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 10/143 (6%)

Query: 217 GAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSS 276
             G+  +       L  A+  G V   + LL+  ADPNA    G  P+ +          
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM------- 54

Query: 277 HCNHVWVAKTLLDRKADPNARALNGFT-PLHIACKKNRYKVVELLLKYGASIAATTESGL 335
                 VA+ LL   A+PN       T P+H A ++     + +L + GA +      G 
Sbjct: 55  --GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGR 112

Query: 336 TPLHVASFMGCMNIAIFLLQAGA 358
            P+ +A   G  +IA +L  A  
Sbjct: 113 LPVDLAEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  136 bits (346), Expect = 7e-38
 Identities = 38/167 (22%), Positives = 59/167 (35%), Gaps = 33/167 (19%)

Query: 631 GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMS 690
               H +  +    L  AA + Q++    LLE  A PNA ++ G  P+ +    G   ++
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVA 60

Query: 691 SLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHF 750
            LL+ HGA  +      LT                                 P+H A+  
Sbjct: 61  ELLLLHGAEPNCADPATLT--------------------------------RPVHDAARE 88

Query: 751 GQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
           G L+ +  L   GA ++     G  P+  A +QG   I   L  A  
Sbjct: 89  GFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  135 bits (343), Expect = 2e-37
 Identities = 38/142 (26%), Positives = 55/142 (38%), Gaps = 10/142 (7%)

Query: 251 ADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACK 310
              +    +    L  A  +          V   + LL+  ADPNA    G  P+ +   
Sbjct: 3   PGIHMLGGSSDAGLATAAARG--------QVETVRQLLEAGADPNALNRFGRRPIQVMMM 54

Query: 311 KNRYKVVELLLKYGASIAATTESGLT-PLHVASFMGCMNIAIFLLQAGAAPDTATVRGET 369
               +V ELLL +GA       + LT P+H A+  G ++  + L +AGA  D     G  
Sbjct: 55  -GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRL 113

Query: 370 PLHLAARANQTDIVRILLRNGA 391
           P+ LA      DI R L     
Sbjct: 114 PVDLAEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  133 bits (338), Expect = 1e-36
 Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 2/130 (1%)

Query: 124 ATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEK 183
               +   L  A   G+V  V  L+  GA+  A  R G  P+      G   V ++L+  
Sbjct: 8   LGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLH 66

Query: 184 GAALYSKTKNGL-APLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRV 242
           GA         L  P+H A++        VL   GA +D         + +A   GH  +
Sbjct: 67  GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDI 126

Query: 243 AKTLLDRKAD 252
           A+ L     D
Sbjct: 127 ARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  133 bits (337), Expect = 1e-36
 Identities = 33/152 (21%), Positives = 54/152 (35%), Gaps = 19/152 (12%)

Query: 482 GASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIA 541
              +          L  +A  GQ E    L E+GA   A  + G  P+ +    G  ++A
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMM-MGSAQVA 60

Query: 542 QMLLQKDAPVDSQGKVASILTESGASITATTKKGFT-PLHLAAKYGRMKIAQMLLQKDAP 600
           ++LL                   GA          T P+H AA+ G +    +L +  A 
Sbjct: 61  ELLLLH-----------------GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103

Query: 601 VDSQGKNGVTPLHVASHYDHQNVALLLLDRGA 632
           +D     G  P+ +A    H+++A  L     
Sbjct: 104 LDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  132 bits (336), Expect = 2e-36
 Identities = 36/168 (21%), Positives = 58/168 (34%), Gaps = 35/168 (20%)

Query: 599 APVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIAT 658
             +   G +    L  A+          LL+ GA P+A+ + G  P+ +        +A 
Sbjct: 3   PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAE 61

Query: 659 TLLEYNAKPNAESKAGFT-PLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQE 717
            LL + A+PN    A  T P+H +A+EG  D   +L   GA                   
Sbjct: 62  LLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGA------------------- 102

Query: 718 DKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN 765
                          +D     G  P+ +A   G  ++ RYL     +
Sbjct: 103 --------------RLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  130 bits (330), Expect = 1e-35
 Identities = 36/160 (22%), Positives = 54/160 (33%), Gaps = 26/160 (16%)

Query: 324 GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIV 383
              I     S    L  A+  G +     LL+AGA P+     G  P+ +        + 
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVA 60

Query: 384 RILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVR 443
            +LL +GA  +       T                          P+H AAR    D + 
Sbjct: 61  ELLLLHGAEPNCADPATLT-------------------------RPVHDAAREGFLDTLV 95

Query: 444 ILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGA 483
           +L R GA +D      + P+ +A   G+ DIA  L     
Sbjct: 96  VLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  130 bits (329), Expect = 2e-35
 Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 2/114 (1%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNIT-P 131
           GQ E  + L++ GA  N  +  G  P+ +        V   LL  G     A    +T P
Sbjct: 23  GQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRP 81

Query: 132 LHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGA 185
           +H A + G +  + +L   GA ++     G  P+  A   GH ++   L     
Sbjct: 82  VHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  103 bits (260), Expect = 3e-26
 Identities = 23/142 (16%), Positives = 45/142 (31%), Gaps = 35/142 (24%)

Query: 664 NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
           +   +    +    L  +A  G  +    L+E GA  +   + G  P+ +          
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM------- 54

Query: 724 TITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYT-PLHQASQ 782
                                      G   +   L+ +GA  N       T P+H A++
Sbjct: 55  ---------------------------GSAQVAELLLLHGAEPNCADPATLTRPVHDAAR 87

Query: 783 QGRVLIIDLLLGAGAQPNATTN 804
           +G +  + +L  AGA+ +    
Sbjct: 88  EGFLDTLVVLHRAGARLDVCDA 109

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 91.3 bits (228), Expect = 7e-22
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 1/84 (1%)

Query: 71  ATGQEEVAKILVDNGATINVQSLNGFT-PLYMAAQENHDGVVRYLLSKGGNQTLATEHNI 129
             G  +VA++L+ +GA  N       T P++ AA+E     +  L   G    +      
Sbjct: 53  MMGSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGR 112

Query: 130 TPLHVACKWGKVAMVELLISKGAN 153
            P+ +A + G   +   L +   +
Sbjct: 113 LPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 64.8 bits (159), Expect = 1e-12
 Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 49/125 (39%)

Query: 3   QGHDRVVAVLLEN-------DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSL 55
            G  +V  +LL +       D         +H AA++                       
Sbjct: 54  MGSAQVAELLLLHGAEPNCADPATLT--RPVHDAARE----------------------- 88

Query: 56  SNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLL 115
                            G  +   +L   GA ++V    G  P+ +A ++ H  + RYL 
Sbjct: 89  -----------------GFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLH 131

Query: 116 SKGGN 120
           +  G+
Sbjct: 132 AATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 55.9 bits (136), Expect = 2e-09
 Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 12/74 (16%)

Query: 763 GANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN-----LFCCA-------T 810
              ++         L  A+ +G+V  +  LL AGA PNA        +            
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSAQVAE 61

Query: 811 ILVKNGAEIDPVTK 824
           +L+ +GAE +    
Sbjct: 62  LLLLHGAEPNCADP 75

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  147 bits (375), Expect = 1e-41
 Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 1/134 (0%)

Query: 565 GASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVA 624
           G     T  +G T LH+A+  G +   + LLQ  +  + +   G TPLH A ++ H  V 
Sbjct: 1   GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV 59

Query: 625 LLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQE 684
            LLL   A  +       +PLH AAK   +DI   LL Y A  NA +  G  P+  +  E
Sbjct: 60  ELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDE 119

Query: 685 GHTDMSSLLIEHGA 698
               +  L  ++ +
Sbjct: 120 SMKSLLLLPEKNES 133

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  146 bits (370), Expect = 5e-41
 Identities = 38/129 (29%), Positives = 58/129 (44%)

Query: 425 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGAS 484
           RGET LH+A+       V  LL+NG+  + +     TPLH A   G+  +  LLLQH A 
Sbjct: 9   RGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL 68

Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
           V+       + LH +AK G  ++  +L   GAS  A    G  P+          +  + 
Sbjct: 69  VNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLP 128

Query: 545 LQKDAPVDS 553
            + ++   S
Sbjct: 129 EKNESSSAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  140 bits (356), Expect = 4e-39
 Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 19/155 (12%)

Query: 515 GASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKK 574
           G     T  +G T LH+A+  G +   + LLQ                  G+        
Sbjct: 1   GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQN-----------------GSDPNVKDHA 42

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
           G+TPLH A  +G +K+ ++LLQ  A V++ G    +PLH A+   H ++  LLL  GAS 
Sbjct: 43  GWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASR 102

Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNA 669
           +AV   G  P+     ++   +   L E N   +A
Sbjct: 103 NAVNIFGLRPVDYTDDESMKSLL-LLPEKNESSSA 136

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  139 bits (354), Expect = 8e-39
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)

Query: 85  GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMV 144
           G         G T L++A+ +     V YLL  G +  +      TPLH AC  G + +V
Sbjct: 1   GIDPFTNH-RGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV 59

Query: 145 ELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQG 204
           ELL+   A +        +PLH AA++GH +++ +L+  GA+  +    GL P+      
Sbjct: 60  ELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDE 119

Query: 205 DHEAATRVLIYHGA 218
             ++   +   + +
Sbjct: 120 SMKSLLLLPEKNES 133

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  139 bits (353), Expect = 9e-39
 Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 9/142 (6%)

Query: 251 ADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACK 310
            DP      G T LHIA  K          +   + LL   +DPN +   G+TPLH AC 
Sbjct: 2   IDPFTNH-RGETLLHIASIKG--------DIPSVEYLLQNGSDPNVKDHAGWTPLHEACN 52

Query: 311 KNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETP 370
               KVVELLL++ A +  T     +PLH A+  G ++I   LL  GA+ +   + G  P
Sbjct: 53  HGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRP 112

Query: 371 LHLAARANQTDIVRILLRNGAS 392
           +      +   ++ +  +N +S
Sbjct: 113 VDYTDDESMKSLLLLPEKNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  137 bits (347), Expect = 7e-38
 Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 1/126 (0%)

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
           T LH+A   G +  VE L+  G++   K   G TPLH A   GH  V+++L++  A + +
Sbjct: 12  TLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT 71

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR 249
                 +PLH A++  H    ++L+ +GA  + + +  L  +          +   L ++
Sbjct: 72  TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLL-LPEK 130

Query: 250 KADPNA 255
               +A
Sbjct: 131 NESSSA 136

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  136 bits (345), Expect = 1e-37
 Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 8/140 (5%)

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR 249
               G   LH+AS      +   L+ +G+  +       T LH A + GH++V + LL  
Sbjct: 6   TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQH 65

Query: 250 KADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIAC 309
           KA  N       +PLH A        +   HV + K LL   A  NA  + G  P+    
Sbjct: 66  KALVNTTGYQNDSPLHDA--------AKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTD 117

Query: 310 KKNRYKVVELLLKYGASIAA 329
            ++   ++ L  K  +S A+
Sbjct: 118 DESMKSLLLLPEKNESSSAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  135 bits (342), Expect = 3e-37
 Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 34/164 (20%)

Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
             G T LHIA+ K  +     LL+  + PN +  AG+TPLH +   GH  +  LL++H A
Sbjct: 8   HRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKA 67

Query: 699 TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY 758
            V+                                        +PLH A+  G +++V+ 
Sbjct: 68  LVNTTGYQ---------------------------------NDSPLHDAAKNGHVDIVKL 94

Query: 759 LVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT 802
           L+  GA+ NA    G  P+     +    ++ L     +  +A+
Sbjct: 95  LLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES-SSAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  135 bits (342), Expect = 3e-37
 Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 18/152 (11%)

Query: 482 GASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIA 541
           G         G T LHI++ +G       L ++G+        G+TPLH A  +G +K+ 
Sbjct: 1   GIDPFT-NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV 59

Query: 542 QMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPV 601
           ++LLQ                   A +  T  +  +PLH AAK G + I ++LL   A  
Sbjct: 60  ELLLQH-----------------KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASR 102

Query: 602 DSQGKNGVTPLHVASHYDHQNVALLLLDRGAS 633
           ++    G+ P+        +++ LL     +S
Sbjct: 103 NAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  134 bits (339), Expect = 7e-37
 Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 17/144 (11%)

Query: 460 QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASIT 519
           +T LH+AS  G+      LLQ+G+  +     G+T LH +   G  +V  +L +  A + 
Sbjct: 11  ETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN 70

Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPL 579
            T  +  +PLH AAK G + I ++LL                   GAS  A    G  P+
Sbjct: 71  TTGYQNDSPLHDAAKNGHVDIVKLLLSY-----------------GASRNAVNIFGLRPV 113

Query: 580 HLAAKYGRMKIAQMLLQKDAPVDS 603
                     +  +  + ++   S
Sbjct: 114 DYTDDESMKSLLLLPEKNESSSAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  133 bits (337), Expect = 1e-36
 Identities = 34/113 (30%), Positives = 52/113 (46%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G     + L+ NG+  NV+   G+TPL+ A    H  VV  LL            N +PL
Sbjct: 21  GDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPL 80

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGA 185
           H A K G V +V+LL+S GA+  A    GL P+         +++ +  +  +
Sbjct: 81  HDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  132 bits (335), Expect = 3e-36
 Identities = 36/126 (28%), Positives = 57/126 (45%)

Query: 606 KNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
             G T LH+AS          LL  G+ P+     G+TPLH A     + +   LL++ A
Sbjct: 8   HRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKA 67

Query: 666 KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATI 725
             N       +PLH +A+ GH D+  LL+ +GA+ +     GL P+     E   ++  +
Sbjct: 68  LVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLL 127

Query: 726 TMFNGA 731
              N +
Sbjct: 128 PEKNES 133

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  129 bits (328), Expect = 2e-35
 Identities = 44/160 (27%), Positives = 64/160 (40%), Gaps = 27/160 (16%)

Query: 292 ADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAI 351
            DP      G T LHIA  K     VE LL+ G+       +G TPLH A   G + +  
Sbjct: 2   IDPFTNH-RGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60

Query: 352 FLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLR 411
            LLQ  A  +T   + ++PLH AA+    DIV++LL  GAS +A                
Sbjct: 61  LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIF------------ 108

Query: 412 RFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGAS 451
                         G  P+      +   ++ +  +N +S
Sbjct: 109 --------------GLRPVDYTDDESMKSLLLLPEKNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  105 bits (265), Expect = 6e-27
 Identities = 35/100 (35%), Positives = 53/100 (53%)

Query: 705 KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA 764
             G T LH+ + +  +      + NG++ +    AG+TPLH A + G L +V  L+++ A
Sbjct: 8   HRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKA 67

Query: 765 NVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
            VN T     +PLH A++ G V I+ LLL  GA  NA   
Sbjct: 68  LVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNI 107

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 93.6 bits (234), Expect = 1e-22
 Identities = 17/81 (20%), Positives = 37/81 (45%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G  +V ++L+ + A +N       +PL+ AA+  H  +V+ LLS G ++       + P+
Sbjct: 54  GHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPV 113

Query: 133 HVACKWGKVAMVELLISKGAN 153
                    +++ L     ++
Sbjct: 114 DYTDDESMKSLLLLPEKNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 56.3 bits (137), Expect = 1e-09
 Identities = 22/125 (17%), Positives = 39/125 (31%), Gaps = 44/125 (35%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
             GH +VV +LL++    +T G      LH AAK                          
Sbjct: 52  NHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKN------------------------- 86

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                          G  ++ K+L+  GA+ N  ++ G  P+     E+   ++      
Sbjct: 87  ---------------GHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131

Query: 118 GGNQT 122
             +  
Sbjct: 132 ESSSA 136

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 46.6 bits (112), Expect = 3e-06
 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 14/71 (19%)

Query: 763 GANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN-----LFC--------CA 809
           G +   T + G T LH AS +G +  ++ LL  G+ PN   +     L            
Sbjct: 1   GIDPF-TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV 59

Query: 810 TILVKNGAEID 820
            +L+++ A ++
Sbjct: 60  ELLLQHKALVN 70

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  147 bits (372), Expect = 8e-40
 Identities = 57/284 (20%), Positives = 84/284 (29%), Gaps = 72/284 (25%)

Query: 303 TPLHIACKKNRYK----VVELLLKYGASI----AATTESGLTPLHVASFM---GCMNIAI 351
             L     +        ++  LL +   +         +G T L  A      G  +   
Sbjct: 7   PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIP 66

Query: 352 FLLQAGAAPDTATV-----------RGETPLHLAARANQTDIVRILLRNGASVDARARED 400
            LL                      RG+T LH+A        V +L+  GA V A+AR  
Sbjct: 67  ILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGR 126

Query: 401 QTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNG---ASVDARAR 457
                       F            GE PL LAA  NQ  IV  L  NG   A +  +  
Sbjct: 127 FFQPKDEGGYFYF------------GELPLSLAACTNQPHIVHYLTENGHKQADLRRQDS 174

Query: 458 EDQTPLHVASRLGNG---------DIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVA 508
              T LH    + +           +  LLL   A +   T                   
Sbjct: 175 RGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLE---------------- 218

Query: 509 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD 552
                           G +PL +AAK G++ I Q +++++    
Sbjct: 219 ----------ALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  138 bits (350), Expect = 7e-37
 Identities = 49/252 (19%), Positives = 80/252 (31%), Gaps = 44/252 (17%)

Query: 459 DQTPLHVASRLGNG----DIASLLLQHGASVDA----PTKDGYTALHISA---KEGQDEV 507
           ++  L      G+      + S LL H   +          G T L  +      G+++ 
Sbjct: 5   NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDT 64

Query: 508 ASILTESG-----------ASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGK 556
             IL +             +       +G T LH+A +       ++L++K A V +Q  
Sbjct: 65  IPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ-- 122

Query: 557 VASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK---DAPVDSQGKNGVTPLH 613
            A                G  PL LAA   +  I   L +     A +  Q   G T LH
Sbjct: 123 -ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLH 181

Query: 614 VASHYDHQN---------VALLLLDRGASPHAVA-------KNGYTPLHIAAKKNQMDIA 657
                             +  LLL + A              +G +PL +AAK  ++ I 
Sbjct: 182 ALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIF 241

Query: 658 TTLLEYNAKPNA 669
             ++       A
Sbjct: 242 QHIIRREIADAA 253

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  135 bits (342), Expect = 8e-36
 Identities = 40/267 (14%), Positives = 83/267 (31%), Gaps = 52/267 (19%)

Query: 97  TPLYMAAQEN----HDGVVRYLLSKGGN----QTLATEHNITPLHVA---CKWGKVAMVE 145
             L+           +G++ +LL+        +        T L  A      G+   + 
Sbjct: 7   PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIP 66

Query: 146 LLISKG-----------ANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNG 194
           +L+              +        G T LH A      + +++L+EKGA ++++ +  
Sbjct: 67  ILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGR 126

Query: 195 LAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR---KA 251
                               Y G             L +A+      +   L +    +A
Sbjct: 127 FFQPKDEGGYF---------YFGE----------LPLSLAACTNQPHIVHYLTENGHKQA 167

Query: 252 DPNARALNGFTPLHIACK-KNRYKSSHCNHVWVAKTLLDRKADPNARAL-------NGFT 303
           D   +   G T LH      +  + +      +   LL + A              +G +
Sbjct: 168 DLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLS 227

Query: 304 PLHIACKKNRYKVVELLLKYGASIAAT 330
           PL +A K  +  + + +++   + AA 
Sbjct: 228 PLMMAAKTGKIGIFQHIIRREIADAAA 254

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  134 bits (339), Expect = 2e-35
 Identities = 53/291 (18%), Positives = 76/291 (26%), Gaps = 66/291 (22%)

Query: 228 LTALHVASHCGHVRVAKTLLDRKADPNA----RALNGFTPLHIACKKNRYKSSHCNHVWV 283
              +   S  G   +   LL  K             G T L  A                
Sbjct: 10  FDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSA-----GRNDT 64

Query: 284 AKTLLDRKADP-----------NARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTE 332
              LLD                      G T LHIA ++     VELL++ GA + A   
Sbjct: 65  IPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQAR 124

Query: 333 SGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNG-- 390
                                             GE PL LAA  NQ  IV  L  NG  
Sbjct: 125 GRFFQPK-------------------DEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK 165

Query: 391 -ASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNG 449
            A +  +     T LH    +                            T +  +LL   
Sbjct: 166 QADLRRQDSRGNTVLHALVAIAD-----------------NTRENTKFVTKMYDLLLIKC 208

Query: 450 ASVDARARED-------QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
           A +      +        +PL +A++ G   I   +++   +  A     +
Sbjct: 209 AKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAAAHHHHH 259

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  133 bits (336), Expect = 5e-35
 Identities = 55/287 (19%), Positives = 83/287 (28%), Gaps = 83/287 (28%)

Query: 527 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKK----GFTPLHLA 582
             L      G     + LL               L      +T    +    G T L  A
Sbjct: 7   PILFDIVSRGSPDGLEGLLS-------------FLLTHKKRLTDEEFREPSTGKTCLPKA 53

Query: 583 A---KYGRMKIAQMLLQK-----------DAPVDSQGKNGVTPLHVASHYDHQNVALLLL 628
                 GR     +LL             ++P       G T LH+A     ++   LL+
Sbjct: 54  LLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLV 113

Query: 629 DRGASPHAVAKN--------------GYTPLHIAAKKNQMDIATTLLE---YNAKPNAES 671
           ++GA  HA A+               G  PL +AA  NQ  I   L E     A    + 
Sbjct: 114 EKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQD 173

Query: 672 KAGFTPLHLSAQEGH---------TDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNV 722
             G T LH                T M  LL+   A +                E  +N 
Sbjct: 174 SRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNL----------EALLN- 222

Query: 723 ATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNAT 769
                            G +PL +A+  G++ + ++++       A 
Sbjct: 223 ---------------NDGLSPLMMAAKTGKIGIFQHIIRREIADAAA 254

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  122 bits (309), Expect = 2e-31
 Identities = 46/236 (19%), Positives = 76/236 (32%), Gaps = 52/236 (22%)

Query: 73  GQEEVAKILVDNGATIN----VQSLNGFTPLYMAA---QENHDGVVRYLLSKGGNQTLAT 125
           G E +   L+ +   +      +   G T L  A        +  +  LL          
Sbjct: 20  GLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR 79

Query: 126 EHNI-----------TPLHVACKWGKVAMVELLISKGANIEAKTR--------------D 160
           E              T LH+A +      VELL+ KGA++ A+ R               
Sbjct: 80  EFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYF 139

Query: 161 GLTPLHCAARSGHDNVIDILIEKG---AALYSKTKNGLAPLHMASQGDHE---------A 208
           G  PL  AA +   +++  L E G   A L  +   G   LH                  
Sbjct: 140 GELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTK 199

Query: 209 ATRVLIYHGAGVDEITVDY-------LTALHVASHCGHVRVAKTLLDRKA-DPNAR 256
              +L+   A +   T          L+ L +A+  G + + + ++ R+  D  A 
Sbjct: 200 MYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAAAH 255

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  114 bits (287), Expect = 2e-28
 Identities = 48/230 (20%), Positives = 68/230 (29%), Gaps = 53/230 (23%)

Query: 610 TPLHVASHY----DHQNVALLLLDRGASPHAV----AKNGYTPLHIAA---KKNQMDIAT 658
             L            + +   LL                G T L  A       + D   
Sbjct: 7   PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIP 66

Query: 659 TLLEY-----------NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG 707
            LL+            N+        G T LH++ +        LL+E GA V  QA+  
Sbjct: 67  ILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGR 126

Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENG---A 764
                               F   +       G  PL +A+   Q ++V YL ENG   A
Sbjct: 127 F-------------------FQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQA 167

Query: 765 NVNATTNLGYTPLHQASQQG---------RVLIIDLLLGAGAQPNATTNL 805
           ++    + G T LH                  + DLLL   A+    TNL
Sbjct: 168 DLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNL 217

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 80.2 bits (198), Expect = 8e-17
 Identities = 39/215 (18%), Positives = 61/215 (28%), Gaps = 56/215 (26%)

Query: 4   GHDRVVAVLLENDTKGKVKLP---------------ALHIAAKKDDCKAAALLLE----V 44
           G +  + +LL+   K                     ALHIA ++       LL+E    V
Sbjct: 60  GRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV 119

Query: 45  SFSNTKLEVSLSNTKLEVSLSNTKF---EATGQEEVAKILVDNG---ATINVQSLNGFTP 98
                       +                 T Q  +   L +NG   A +  Q   G T 
Sbjct: 120 HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTV 179

Query: 99  LYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKT 158
           L+       +                                  M +LL+ K A +   T
Sbjct: 180 LHALVAIADN------------------------TRENTKFVTKMYDLLLIKCAKLFPDT 215

Query: 159 -------RDGLTPLHCAARSGHDNVIDILIEKGAA 186
                   DGL+PL  AA++G   +   +I +  A
Sbjct: 216 NLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIA 250

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  140 bits (356), Expect = 2e-39
 Identities = 42/115 (36%), Positives = 68/115 (59%), Gaps = 2/115 (1%)

Query: 85  GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMV 144
           G      S +G TPL+ AA+  H   V+ LLSKG +    ++   TPLH+A K G   +V
Sbjct: 1   GHMWG--SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIV 58

Query: 145 ELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLH 199
           +LL++KGA++ A+++DG TP H A ++GH  ++ +L  KGA + +++       H
Sbjct: 59  KLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  126 bits (320), Expect = 1e-34
 Identities = 43/107 (40%), Positives = 58/107 (54%)

Query: 606 KNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
           K+G TPLH A+   H      LL +GA  +A +K+G TPLH+AAK    +I   LL   A
Sbjct: 7   KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA 66

Query: 666 KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLH 712
             NA SK G TP HL+ + GH ++  LL   GA V+ ++       H
Sbjct: 67  DVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  125 bits (318), Expect = 3e-34
 Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 2/115 (1%)

Query: 151 GANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAAT 210
           G    +K  DG TPLH AA++GH   +  L+ KGA + +++K+G  PLH+A++  H    
Sbjct: 1   GHMWGSK--DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIV 58

Query: 211 RVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLH 265
           ++L+  GA V+  + D  T  H+A   GH  + K L  + AD NAR+       H
Sbjct: 59  KLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  124 bits (315), Expect = 7e-34
 Identities = 42/105 (40%), Positives = 62/105 (59%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
           G TPLH AA+    + V+ LL  GA V+AR+++  TPLH+A++ G+ +I  LLL  GA V
Sbjct: 9   GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV 68

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLH 530
           +A +KDG T  H++ K G  E+  +L   GA + A +       H
Sbjct: 69  NARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  123 bits (312), Expect = 2e-33
 Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 2/115 (1%)

Query: 565 GASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVA 624
           G      +K G TPLH AAK G  +  + LL K A V+++ K+G TPLH+A+   H  + 
Sbjct: 1   GHMWG--SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIV 58

Query: 625 LLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLH 679
            LLL +GA  +A +K+G TP H+A K    +I   L    A  NA S       H
Sbjct: 59  KLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  122 bits (308), Expect = 6e-33
 Identities = 39/112 (34%), Positives = 60/112 (53%)

Query: 668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM 727
              SK G TPLH +A+ GH +    L+  GA V+ ++K+G TPLHL A+     +  + +
Sbjct: 3   MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL 62

Query: 728 FNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQ 779
             GA+++  +K G TP H+A   G   +V+ L   GA+VNA +       H 
Sbjct: 63  AKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHHH 114

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  121 bits (307), Expect = 7e-33
 Identities = 39/110 (35%), Positives = 65/110 (59%)

Query: 123 LATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIE 182
             ++   TPLH A K G    V+ L+SKGA++ A+++DG TPLH AA++GH  ++ +L+ 
Sbjct: 4   WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLA 63

Query: 183 KGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALH 232
           KGA + +++K+G  P H+A +  H    ++L   GA V+  +       H
Sbjct: 64  KGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  116 bits (294), Expect = 4e-31
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 19/132 (14%)

Query: 515 GASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKK 574
           G      +K G TPLH AAK G  +  + LL K                 GA + A +K 
Sbjct: 1   GHMWG--SKDGNTPLHNAAKNGHAEEVKKLLSK-----------------GADVNARSKD 41

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
           G TPLHLAAK G  +I ++LL K A V+++ K+G TP H+A    H  +  LL  +GA  
Sbjct: 42  GNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101

Query: 635 HAVAKNGYTPLH 646
           +A +       H
Sbjct: 102 NARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  116 bits (294), Expect = 4e-31
 Identities = 40/106 (37%), Positives = 56/106 (52%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA 359
           +G TPLH A K    + V+ LL  GA + A ++ G TPLH+A+  G   I   LL  GA 
Sbjct: 8   DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67

Query: 360 PDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLH 405
            +  +  G TP HLA +    +IV++L   GA V+AR+       H
Sbjct: 68  VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  116 bits (294), Expect = 4e-31
 Identities = 48/132 (36%), Positives = 63/132 (47%), Gaps = 19/132 (14%)

Query: 482 GASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIA 541
           G      +KDG T LH +AK G  E    L   GA + A +K G TPLHLAAK G  +I 
Sbjct: 1   GHMWG--SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIV 58

Query: 542 QMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPV 601
           ++LL K                 GA + A +K G TP HLA K G  +I ++L  K A V
Sbjct: 59  KLLLAK-----------------GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101

Query: 602 DSQGKNGVTPLH 613
           +++        H
Sbjct: 102 NARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  114 bits (289), Expect = 2e-30
 Identities = 34/94 (36%), Positives = 55/94 (58%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G  E  K L+  GA +N +S +G TPL++AA+  H  +V+ LL+KG +    ++   TP 
Sbjct: 20  GHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPE 79

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLH 166
           H+A K G   +V+LL +KGA++ A++       H
Sbjct: 80  HLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  114 bits (288), Expect = 3e-30
 Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 8/114 (7%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
           +G TPLH A        +   H    K LL + AD NAR+ +G TPLH+A K    ++V+
Sbjct: 8   DGNTPLHNA--------AKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVK 59

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLH 372
           LLL  GA + A ++ G TP H+A   G   I   L   GA  +  +       H
Sbjct: 60  LLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  112 bits (282), Expect = 2e-29
 Identities = 42/121 (34%), Positives = 59/121 (48%), Gaps = 17/121 (14%)

Query: 460 QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASIT 519
            TPLH A++ G+ +    LL  GA V+A +KDG T LH++AK G  E+  +L   GA + 
Sbjct: 10  NTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN 69

Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPL 579
           A +K G TP HLA K G  +I ++L  K                 GA + A +       
Sbjct: 70  ARSKDGNTPEHLAKKNGHHEIVKLLDAK-----------------GADVNARSWGSSHHH 112

Query: 580 H 580
           H
Sbjct: 113 H 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  104 bits (262), Expect = 1e-26
 Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 28/141 (19%)

Query: 324 GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIV 383
           G      ++ G TPLH A+  G       LL  GA  +  +  G TPLHLAA+    +IV
Sbjct: 1   GHMWG--SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIV 58

Query: 384 RILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVR 443
           ++LL  GA V+AR+++                          G TP HLA +    +IV+
Sbjct: 59  KLLLAKGADVNARSKD--------------------------GNTPEHLAKKNGHHEIVK 92

Query: 444 ILLRNGASVDARAREDQTPLH 464
           +L   GA V+AR+       H
Sbjct: 93  LLDAKGADVNARSWGSSHHHH 113

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  147 bits (372), Expect = 3e-39
 Identities = 46/288 (15%), Positives = 85/288 (29%), Gaps = 31/288 (10%)

Query: 414 SSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGD 473
           S        +++ E  L         ++   L  + ++ ++            S      
Sbjct: 51  SPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQ 110

Query: 474 -IASLLLQHGASVDAPT-KDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHL 531
            +         +++ P  + G T LH        E+   L + G++       G + L  
Sbjct: 111 EVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVK 170

Query: 532 AAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMK-- 589
           A K                    G   ++L      +        T LH       M   
Sbjct: 171 AVKSVNNY-------------DSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGC 217

Query: 590 ----------IAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVA- 638
                     +   +++K       G N         + + ++  L  LD       +  
Sbjct: 218 SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN 277

Query: 639 ---KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQ 683
               NG T L+IAA+   + I   LL+Y A P   +K+G  P+   A 
Sbjct: 278 AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 325

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  140 bits (355), Expect = 6e-37
 Identities = 51/325 (15%), Positives = 96/325 (29%), Gaps = 18/325 (5%)

Query: 31  KKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINV 90
             +   +       +  N +    +       +   T    +   ++ K L       N 
Sbjct: 3   DINKGPSGDNENNGTDDNDRTAGPIITF----THDLTSDFLSSPLKIMKALPSPVVNDNE 58

Query: 91  QSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL-HVACKWGKVAMVELLIS 149
           Q +     L          +   L +   N+      +     HV+       + +   +
Sbjct: 59  QKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPN 118

Query: 150 KGANIEAKT-RDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDH-- 206
              N+       G TPLH      +  ++  L++ G+        G + L  A +  +  
Sbjct: 119 TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNY 178

Query: 207 --EAATRVLIYHGAGVDEITVDYLTALH----VASHCGHVRVAK----TLLDRKADPNAR 256
                  +L Y    +        T LH     +   G    AK     L+        R
Sbjct: 179 DSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNR 238

Query: 257 ALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKV 316
            +   T    +   ++      + +             NA+  NG T L+IA +     +
Sbjct: 239 PIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISI 298

Query: 317 VELLLKYGASIAATTESGLTPLHVA 341
           V+ LL YGA      +SGL P+   
Sbjct: 299 VDALLDYGADPFIANKSGLRPVDFG 323

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  140 bits (353), Expect = 1e-36
 Identities = 39/302 (12%), Positives = 88/302 (29%), Gaps = 39/302 (12%)

Query: 357 GAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSA 416
               +   ++ E  L         ++   L  + ++ ++                     
Sbjct: 53  VVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQ----------- 101

Query: 417 SQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARARED-QTPLHVASRLGNGDIA 475
                         H++  +   ++         +++    E   TPLH  + + N ++ 
Sbjct: 102 --------------HVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELV 147

Query: 476 SLLLQHGASVDAPTKDGYTALHISAKEG----QDEVASILTESGASITATTKKGFTPLHL 531
             L++HG++       G + L  + K           ++L      +        T LH 
Sbjct: 148 KHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHH 207

Query: 532 AAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGR---- 587
                 M          A       +   + +       +               R    
Sbjct: 208 IIITSGMT-----GCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSI 262

Query: 588 MKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHI 647
           ++   +       +++Q  NG T L++A+   + ++   LLD GA P    K+G  P+  
Sbjct: 263 LENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDF 322

Query: 648 AA 649
            A
Sbjct: 323 GA 324

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  136 bits (344), Expect = 1e-35
 Identities = 41/353 (11%), Positives = 94/353 (26%), Gaps = 73/353 (20%)

Query: 436 ANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTA 495
           ++   I++ L     + + +  + +  L         ++ + L    ++ ++        
Sbjct: 40  SSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQ 99

Query: 496 L-HISAKEGQDEVASILTESGASITATT-KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS 553
             H+S      EV      +  ++     + G TPLH       +++ + L++       
Sbjct: 100 QQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKH------ 153

Query: 554 QGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLH 613
                      G++       G + L  A K                             
Sbjct: 154 -----------GSNRLYGDNMGESCLVKAVKSVN-------------------------- 176

Query: 614 VASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKA 673
              +YD      LL               T LH     + M   +   +Y          
Sbjct: 177 ---NYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMG--- 230

Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM----FN 729
                              +++          N           ++ +     +      
Sbjct: 231 ------------------WIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWII 272

Query: 730 GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQ 782
              ++     G T L+IA+  G +++V  L++ GA+       G  P+   + 
Sbjct: 273 ANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 325

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  134 bits (337), Expect = 2e-34
 Identities = 38/257 (14%), Positives = 82/257 (31%), Gaps = 16/257 (6%)

Query: 283 VAKTLLDRKADPNARALNGFTPLHIACKKNRYK-VVELLLKYGASI-AATTESGLTPLHV 340
           +  +L +  ++ N+   +           +  + V +       ++     E G TPLH 
Sbjct: 78  MPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHW 137

Query: 341 ASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN----QTDIVRILLRNGASVDAR 396
            + +  + +   L++ G+        GE+ L  A ++           +L      +   
Sbjct: 138 LTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILE 197

Query: 397 AREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARA 456
              ++T LH        +  S +A  +   +  +    +     I         S     
Sbjct: 198 DSMNRTILHHIIITSGMTGCSAAA--KYYLDILMGWIVKKQNRPI--------QSGTNEK 247

Query: 457 REDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGA 516
                  +   +    +   L       ++A   +G T L+I+A+ G   +   L + GA
Sbjct: 248 ESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGA 307

Query: 517 SITATTKKGFTPLHLAA 533
                 K G  P+   A
Sbjct: 308 DPFIANKSGLRPVDFGA 324

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  118 bits (297), Expect = 2e-29
 Identities = 40/279 (14%), Positives = 84/279 (30%), Gaps = 22/279 (7%)

Query: 548 DAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKN 607
              + S  K+   L     +      K    L         ++   L    +  +S+G +
Sbjct: 36  SDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGS 95

Query: 608 GVTPL-HVASHYDHQNVALLLLDRGASP-HAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
                 HV+     Q V     +   +    V ++G TPLH       +++   L+++ +
Sbjct: 96  SNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGS 155

Query: 666 KPNAESKAGFTPLHLSAQEGHT----DMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVN 721
                   G + L  + +  +        +LL      +  +     T LH       + 
Sbjct: 156 NRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMT 215

Query: 722 ------------VATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN----GAN 765
                       +    +                     +  + + +   ++        
Sbjct: 216 GCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANM 275

Query: 766 VNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           +NA  + G T L+ A++ G + I+D LL  GA P     
Sbjct: 276 LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANK 314

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 99.3 bits (247), Expect = 9e-23
 Identities = 31/259 (11%), Positives = 61/259 (23%), Gaps = 85/259 (32%)

Query: 25  ALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDN 84
            LH                                                E+ K LV +
Sbjct: 134 PLHWLTSI----------------------------------------ANLELVKHLVKH 153

Query: 85  GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMV 144
           G+        G + L  A +  +                              +      
Sbjct: 154 GSNRLYGDNMGESCLVKAVKSVN-----------------------------NYDSGTFE 184

Query: 145 ELLISKGANIEAKTRDGLTPLHCAA------------RSGHDNVIDILIEKGAALYSKTK 192
            LL      +  +     T LH               +   D ++  +++K         
Sbjct: 185 ALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGT 244

Query: 193 NGLAPLHMASQGDHEAATRVLIYH----GAGVDEITVDYLTALHVASHCGHVRVAKTLLD 248
           N          G+ + +    +         ++    +  T L++A+  G++ +   LLD
Sbjct: 245 NEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLD 304

Query: 249 RKADPNARALNGFTPLHIA 267
             ADP     +G  P+   
Sbjct: 305 YGADPFIANKSGLRPVDFG 323

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 76.6 bits (188), Expect = 4e-15
 Identities = 26/158 (16%), Positives = 52/158 (32%), Gaps = 2/158 (1%)

Query: 629 DRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD 688
           D               L      + + I   L       N +       L         +
Sbjct: 18  DDNDRTAGPIITFTHDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQE 77

Query: 689 MSSLLIEHGATVSHQAKNGLTPLHLCAQEDKV-NVATITMFNGAEID-PVTKAGFTPLHI 746
           M + L    +  + +  +        + +  +  V          ++ PV + G TPLH 
Sbjct: 78  MPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHW 137

Query: 747 ASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQG 784
            +    L +V++LV++G+N     N+G + L +A +  
Sbjct: 138 LTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSV 175

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  138 bits (350), Expect = 7e-38
 Identities = 37/222 (16%), Positives = 64/222 (28%), Gaps = 40/222 (18%)

Query: 454 ARAREDQTPLHVASRLGNGDIASLLLQHGASVDAP---TKDGYTALHISAKEGQDEVASI 510
           + A  +   +  A+ LG  +    L + G         +   Y  L  +  E + +++  
Sbjct: 1   SNAMSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMF 60

Query: 511 LTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITA 570
           L   GA I + TK+G T      + G   I               ++  I  E GA ITA
Sbjct: 61  LINKGADIKSRTKEGTTLFFPLFQGGGNDITGTT-----------ELCKIFLEKGADITA 109

Query: 571 TTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDR 630
             K     +        +   +M+                              L+    
Sbjct: 110 LYKPYKIVVFKNIFNYFVDENEMI--------------------------PLYKLIFSQS 143

Query: 631 GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK 672
           G       K G T L    +  +      + +Y  K N +  
Sbjct: 144 GLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  137 bits (347), Expect = 2e-37
 Identities = 28/201 (13%), Positives = 56/201 (27%), Gaps = 36/201 (17%)

Query: 367 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRG 426
               +  AA     +    L   G   + +    ++ +                      
Sbjct: 6   EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILY-------------------- 43

Query: 427 ETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIAS------LLLQ 480
              L       +  I   L+  GA + +R +E  T      + G  DI        + L+
Sbjct: 44  -DVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLE 102

Query: 481 HGASVDAPTKDGYTALHISAKEGQDE-------VASILTESGASITATTKKGFTPLHLAA 533
            GA + A  K     +  +      +          I ++SG  +    K G T L    
Sbjct: 103 KGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVK 162

Query: 534 KYGRMKIAQMLLQKDAPVDSQ 554
           +  +    +M+       + +
Sbjct: 163 RCQKPIALKMMEDYIKKYNLK 183

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  137 bits (347), Expect = 2e-37
 Identities = 26/187 (13%), Positives = 46/187 (24%), Gaps = 10/187 (5%)

Query: 156 AKTRDGLTPLHCAARSGHDNVIDILIEKGA---ALYSKTKNGLAPLHMASQGDHEAATRV 212
           +        +  AA  G       L EKG        K+      L   +       +  
Sbjct: 1   SNAMSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMF 60

Query: 213 LIYHGAGVDEITVDYLTALHVASHCGH------VRVAKTLLDRKADPNARALNGFTPLHI 266
           LI  GA +   T +  T        G         + K  L++ AD  A        +  
Sbjct: 61  LINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFK 120

Query: 267 ACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGAS 326
                    +    +               +   G T L    +  +   ++++  Y   
Sbjct: 121 NIFNYFVDENEMIPL-YKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKK 179

Query: 327 IAATTES 333
                 S
Sbjct: 180 YNLKENS 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  137 bits (347), Expect = 2e-37
 Identities = 29/183 (15%), Positives = 56/183 (30%), Gaps = 16/183 (8%)

Query: 638 AKNGYTPLHIAAKKNQMDIATTLLEYNA---KPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
           A + Y  +  AA     +    L E      +   +S   +  L  +  E    +S  LI
Sbjct: 3   AMSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLI 62

Query: 695 EHGATVSHQAKNGLTPLHLCAQEDKVNVATITMF------NGAEIDPVTKAGFTPLHIAS 748
             GA +  + K G T      Q    ++   T         GA+I  + K     +    
Sbjct: 63  NKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNI 122

Query: 749 HFGQLNMVR-------YLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA 801
               ++             ++G  +      G T L    +  + + + ++     + N 
Sbjct: 123 FNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNL 182

Query: 802 TTN 804
             N
Sbjct: 183 KEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  137 bits (346), Expect = 3e-37
 Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 16/181 (8%)

Query: 92  SLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHN---ITPLHVACKWGKVAMVELLI 148
           +++ +  +  AA          L  KG     +   +      L       +  +   LI
Sbjct: 3   AMSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLI 62

Query: 149 SKGANIEAKTRDGLTPLHCAARSGHDNVID------ILIEKGAALYSKTKNGLAPLHMAS 202
           +KGA+I+++T++G T      + G +++        I +EKGA + +  K     +    
Sbjct: 63  NKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNI 122

Query: 203 QGDHEAATR-------VLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNA 255
                           +    G  +       LTAL     C      K + D     N 
Sbjct: 123 FNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNL 182

Query: 256 R 256
           +
Sbjct: 183 K 183

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  135 bits (341), Expect = 2e-36
 Identities = 28/201 (13%), Positives = 59/201 (29%), Gaps = 29/201 (14%)

Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPV-DSQGKVASILTESGASITATTKKGFTP 578
           +     +  +  AA  G  +    L +K     +S  K               +   +  
Sbjct: 1   SNAMSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLK---------------SNILYDV 45

Query: 579 LHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVAL------LLLDRGA 632
           L       R KI+  L+ K A + S+ K G T           ++        + L++GA
Sbjct: 46  LRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGA 105

Query: 633 SPHAVAKNGYTPLHIAAKKNQMDIATT-------LLEYNAKPNAESKAGFTPLHLSAQEG 685
              A+ K     +        +D             +   +   + K G T L    +  
Sbjct: 106 DITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQ 165

Query: 686 HTDMSSLLIEHGATVSHQAKN 706
                 ++ ++    + +  +
Sbjct: 166 KPIALKMMEDYIKKYNLKENS 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  131 bits (331), Expect = 3e-35
 Identities = 27/205 (13%), Positives = 58/205 (28%), Gaps = 28/205 (13%)

Query: 296 ARALNGFTPLHIACKKNRYKVVELLLKYGASIAAT---TESGLTPLHVASFMGCMNIAIF 352
           + A++ +  +  A     Y+    L + G     +   +      L   +      I++F
Sbjct: 1   SNAMSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMF 60

Query: 353 LLQAGAAPDTATVRGETPLHLAARANQTDI------VRILLRNGASVDARAREDQTPLHV 406
           L+  GA   + T  G T      +    DI       +I L  GA + A  +  +  +  
Sbjct: 61  LINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFK 120

Query: 407 ASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVA 466
                         L ++                   I  ++G  +  + +   T L   
Sbjct: 121 NIFNYFVDENEMIPLYKL-------------------IFSQSGLQLLIKDKWGLTALEFV 161

Query: 467 SRLGNGDIASLLLQHGASVDAPTKD 491
            R        ++  +    +     
Sbjct: 162 KRCQKPIALKMMEDYIKKYNLKENS 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  121 bits (306), Expect = 6e-32
 Identities = 28/217 (12%), Positives = 59/217 (27%), Gaps = 50/217 (23%)

Query: 255 ARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALN---GFTPLHIACKK 311
           + A++ +  +  A     Y+            L ++  +     L     +  L     +
Sbjct: 1   SNAMSEYRTVSAAAMLGTYE--------DFLELFEKGYEDKESVLKSNILYDVLRNNNDE 52

Query: 312 NRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAI------FLLQAGAAPDTATV 365
            RYK+   L+  GA I + T+ G T        G  +I          L+ GA       
Sbjct: 53  ARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYK 112

Query: 366 RGETPLHLAARANQTDIVR-------ILLRNGASVDARAREDQTPLHVASRLRRFSSASQ 418
             +  +         D          I  ++G  +  + +                    
Sbjct: 113 PYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKW------------------- 153

Query: 419 SALTRVRGETPLHLAARANQTDIVRILLRNGASVDAR 455
                  G T L    R  +   ++++       + +
Sbjct: 154 -------GLTALEFVKRCQKPIALKMMEDYIKKYNLK 183

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  117 bits (295), Expect = 2e-30
 Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 25/186 (13%)

Query: 25  ALHIAAKKDDCKAAALLLE----VSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKI 80
            +  AA     +    L E       S  K      +  L   L N   E   + +++  
Sbjct: 9   TVSAAAMLGTYEDFLELFEKGYEDKESVLK------SNILYDVLRNNNDE--ARYKISMF 60

Query: 81  LVDNGATINVQSLNGFTPLYMAAQENHDGV------VRYLLSKGGNQTLATEHNITPLHV 134
           L++ GA I  ++  G T  +   Q   + +       +  L KG + T   +     +  
Sbjct: 61  LINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFK 120

Query: 135 ACKWGKVAMVE-------LLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAAL 187
                 V   E       +    G  +  K + GLT L    R      + ++ +     
Sbjct: 121 NIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKY 180

Query: 188 YSKTKN 193
             K  +
Sbjct: 181 NLKENS 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 79.3 bits (196), Expect = 4e-17
 Identities = 18/142 (12%), Positives = 38/142 (26%), Gaps = 36/142 (25%)

Query: 669 AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMF 728
           + + + +  +  +A  G  +    L E G           + +                 
Sbjct: 1   SNAMSEYRTVSAAAMLGTYEDFLELFEKGYEDK--ESVLKSNIL---------------- 42

Query: 729 NGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGR--- 785
                       +  L   +   +  +  +L+  GA++ + T  G T      Q G    
Sbjct: 43  ------------YDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDI 90

Query: 786 ---VLIIDLLLGAGAQPNATTN 804
                +  + L  GA   A   
Sbjct: 91  TGTTELCKIFLEKGADITALYK 112

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  134 bits (341), Expect = 4e-37
 Identities = 46/123 (37%), Positives = 72/123 (58%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
               L  AARA Q D VRIL+ NGA V+A+     TPL++A+  G+ +I  +LL++GA V
Sbjct: 14  LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV 73

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           +A    G+T LH++A  G  E+A +L + GA + A  K G T   ++   G   +A++L 
Sbjct: 74  NAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQ 133

Query: 546 QKD 548
           + +
Sbjct: 134 KLN 136

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  133 bits (338), Expect = 1e-36
 Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 7/139 (5%)

Query: 78  AKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACK 137
           +     +G+ +          L  AA+   D  VR L++ G +     E+ +TPL++A  
Sbjct: 4   SHHHHHHGSDLG-------KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATA 56

Query: 138 WGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAP 197
            G + +VE+L+  GA++ A    G TPLH AA  GH  + ++L++ GA + ++ K G   
Sbjct: 57  HGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTA 116

Query: 198 LHMASQGDHEAATRVLIYH 216
             ++    +E    +L   
Sbjct: 117 FDISIGNGNEDLAEILQKL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  127 bits (322), Expect = 2e-34
 Identities = 40/122 (32%), Positives = 70/122 (57%)

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
               L  AA+ G+    ++L+   A V+++ + G+TPL++A+ + H  +  +LL  GA  
Sbjct: 14  LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV 73

Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI 694
           +AV   G+TPLH+AA    ++IA  LL++ A  NA+ K G T   +S   G+ D++ +L 
Sbjct: 74  NAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQ 133

Query: 695 EH 696
           + 
Sbjct: 134 KL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  127 bits (321), Expect = 2e-34
 Identities = 37/118 (31%), Positives = 62/118 (52%)

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
             L  A + G+   V +L++ GA++ AK   GLTPL+ A   GH  ++++L++ GA + +
Sbjct: 16  KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA 75

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLL 247
               G  PLH+A+   H     VL+ HGA V+       TA  ++   G+  +A+ L 
Sbjct: 76  VDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  124 bits (314), Expect = 2e-33
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 6/126 (4%)

Query: 57  NTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLS 116
             KL  +         GQ++  +IL+ NGA +N +   G TPLY+A    H  +V  LL 
Sbjct: 15  GKKLLEAARA------GQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLK 68

Query: 117 KGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNV 176
            G +         TPLH+A   G + + E+L+  GA++ A+ + G T    +  +G++++
Sbjct: 69  NGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDL 128

Query: 177 IDILIE 182
            +IL +
Sbjct: 129 AEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  121 bits (307), Expect = 1e-32
 Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 15/146 (10%)

Query: 178 DILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHC 237
                 G+       +    L  A++   +   R+L+ +GA V+      LT L++A+  
Sbjct: 5   HHHHHHGS-------DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAH 57

Query: 238 GHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNAR 297
           GH+ + + LL   AD NA    GFTPLH+A        +   H+ +A+ LL   AD NA+
Sbjct: 58  GHLEIVEVLLKNGADVNAVDAIGFTPLHLA--------AFIGHLEIAEVLLKHGADVNAQ 109

Query: 298 ALNGFTPLHIACKKNRYKVVELLLKY 323
              G T   I+       + E+L K 
Sbjct: 110 DKFGKTAFDISIGNGNEDLAEILQKL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  121 bits (306), Expect = 2e-32
 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 7/128 (5%)

Query: 145 ELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQG 204
                 G+++          L  AAR+G D+ + IL+  GA + +K + GL PL++A+  
Sbjct: 5   HHHHHHGSDLG-------KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAH 57

Query: 205 DHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPL 264
            H     VL+ +GA V+ +     T LH+A+  GH+ +A+ LL   AD NA+   G T  
Sbjct: 58  GHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAF 117

Query: 265 HIACKKNR 272
            I+     
Sbjct: 118 DISIGNGN 125

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  121 bits (306), Expect = 2e-32
 Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 24/155 (15%)

Query: 444 ILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEG 503
               +G+ +          L  A+R G  D   +L+ +GA V+A  + G T L+++   G
Sbjct: 6   HHHHHGSDL-------GKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHG 58

Query: 504 QDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTE 563
             E+  +L ++GA + A    GFTPLHLAA  G ++IA++LL+                 
Sbjct: 59  HLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKH---------------- 102

Query: 564 SGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD 598
            GA + A  K G T   ++   G   +A++L + +
Sbjct: 103 -GADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  120 bits (305), Expect = 3e-32
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 17/140 (12%)

Query: 525 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK 584
               L  AA+ G+    ++L+                   GA + A  + G TPL+LA  
Sbjct: 14  LGKKLLEAARAGQDDEVRILMAN-----------------GADVNAKDEYGLTPLYLATA 56

Query: 585 YGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTP 644
           +G ++I ++LL+  A V++    G TPLH+A+   H  +A +LL  GA  +A  K G T 
Sbjct: 57  HGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTA 116

Query: 645 LHIAAKKNQMDIATTLLEYN 664
             I+      D+A  L + N
Sbjct: 117 FDISIGNGNEDLAEILQKLN 136

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  119 bits (302), Expect = 7e-32
 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 33/154 (21%)

Query: 640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT 699
           +    L  AA+  Q D    L+   A  NA+ + G TPL+L+   GH ++  +L+++GA 
Sbjct: 13  DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGA- 71

Query: 700 VSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
                                           +++ V   GFTPLH+A+  G L +   L
Sbjct: 72  --------------------------------DVNAVDAIGFTPLHLAAFIGHLEIAEVL 99

Query: 760 VENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
           +++GA+VNA    G T    +   G   + ++L 
Sbjct: 100 LKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  119 bits (302), Expect = 7e-32
 Identities = 38/121 (31%), Positives = 61/121 (50%)

Query: 603 SQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLE 662
             G +    L  A+     +   +L+  GA  +A  + G TPL++A     ++I   LL+
Sbjct: 9   HHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLK 68

Query: 663 YNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNV 722
             A  NA    GFTPLHL+A  GH +++ +L++HGA V+ Q K G T   +       ++
Sbjct: 69  NGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDL 128

Query: 723 A 723
           A
Sbjct: 129 A 129

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  118 bits (298), Expect = 2e-31
 Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 8/129 (6%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
           +    L  A        +        + L+   AD NA+   G TPL++A      ++VE
Sbjct: 13  DLGKKLLEA--------ARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVE 64

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN 378
           +LLK GA + A    G TPLH+A+F+G + IA  LL+ GA  +     G+T   ++    
Sbjct: 65  VLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNG 124

Query: 379 QTDIVRILL 387
             D+  IL 
Sbjct: 125 NEDLAEILQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  112 bits (282), Expect = 4e-29
 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 26/147 (17%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA 359
           +    L  A +  +   V +L+  GA + A  E GLTPL++A+  G + I   LL+ GA 
Sbjct: 13  DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD 72

Query: 360 PDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQS 419
            +     G TPLHLAA     +I  +LL++GA V+A+ +                     
Sbjct: 73  VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKF-------------------- 112

Query: 420 ALTRVRGETPLHLAARANQTDIVRILL 446
                 G+T   ++      D+  IL 
Sbjct: 113 ------GKTAFDISIGNGNEDLAEILQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 97.5 bits (244), Expect = 4e-24
 Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 7/112 (6%)

Query: 693 LIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQ 752
              HG+       +    L   A+  + +   I M NGA+++   + G TPL++A+  G 
Sbjct: 7   HHHHGS-------DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGH 59

Query: 753 LNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           L +V  L++NGA+VNA   +G+TPLH A+  G + I ++LL  GA  NA   
Sbjct: 60  LEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDK 111

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  133 bits (338), Expect = 7e-37
 Identities = 31/115 (26%), Positives = 50/115 (43%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN 153
                   A +      V+  ++KG +     E    PLH A   G++ ++E L+ KGA+
Sbjct: 6   MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD 65

Query: 154 IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEA 208
           I A  +  +TPL  A   GH + + +L+ KGA    K  +GL           +A
Sbjct: 66  INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKA 120

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  131 bits (333), Expect = 3e-36
 Identities = 29/117 (24%), Positives = 42/117 (35%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
            +     A +    D V+  +  G  V+      + PLH A+  G  +I   LL  GA +
Sbjct: 7   CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI 66

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQ 542
           +AP K   T L  +  EG      +L   GA  T     G T            + Q
Sbjct: 67  NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  129 bits (327), Expect = 2e-35
 Identities = 29/115 (25%), Positives = 50/115 (43%)

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
                A K G +  V+  ++KG ++      G  PLH AA  G   +++ L+ KGA + +
Sbjct: 9   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 68

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAK 244
             K+ + PL  A    H +  ++L+  GA       D LTA     +     + +
Sbjct: 69  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  127 bits (321), Expect = 1e-34
 Identities = 34/105 (32%), Positives = 49/105 (46%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G  +  K  V  G  +N     G  PL+ AA      ++ +LL KG +     +H+ITPL
Sbjct: 18  GDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPL 77

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI 177
             A   G V+ V+LL+SKGA+   K  DGLT            ++
Sbjct: 78  LSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALL 122

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  126 bits (320), Expect = 2e-34
 Identities = 25/116 (21%), Positives = 40/116 (34%)

Query: 573 KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGA 632
                    A K G +   +  + K   V+   + G  PLH A+      +   LL +GA
Sbjct: 5   SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGA 64

Query: 633 SPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD 688
             +A  K+  TPL  A  +  +     LL   A    +   G T    +  +    
Sbjct: 65  DINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKA 120

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  124 bits (315), Expect = 7e-34
 Identities = 30/114 (26%), Positives = 43/114 (37%)

Query: 605 GKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN 664
           G         A      +     + +G   +   + G  PLH AA   Q++I   LL   
Sbjct: 4   GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG 63

Query: 665 AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQED 718
           A  NA  K   TPL  +  EGH     LL+  GA  + +  +GLT       + 
Sbjct: 64  ADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  124 bits (315), Expect = 8e-34
 Identities = 27/154 (17%), Positives = 45/154 (29%), Gaps = 33/154 (21%)

Query: 636 AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIE 695
            +          A K   +D     +      N   + G  PLH +A  G  ++   L+ 
Sbjct: 2   PLGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLL 61

Query: 696 HGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNM 755
            GA                                 +I+   K   TPL  A + G ++ 
Sbjct: 62  KGA---------------------------------DINAPDKHHITPLLSAVYEGHVSC 88

Query: 756 VRYLVENGANVNATTNLGYTPLHQASQQGRVLII 789
           V+ L+  GA+       G T       Q    ++
Sbjct: 89  VKLLLSKGADKTVKGPDGLTAFEATDNQAIKALL 122

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  121 bits (306), Expect = 1e-32
 Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 17/134 (12%)

Query: 523 KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLA 582
                    A K G +   +  + K                 G  +  T + G  PLH A
Sbjct: 5   SMCDKEFMWALKNGDLDEVKDYVAK-----------------GEDVNRTLEGGRKPLHYA 47

Query: 583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGY 642
           A  G+++I + LL K A +++  K+ +TPL  A +  H +   LLL +GA       +G 
Sbjct: 48  ADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGL 107

Query: 643 TPLHIAAKKNQMDI 656
           T       +    +
Sbjct: 108 TAFEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  121 bits (306), Expect = 2e-32
 Identities = 32/134 (23%), Positives = 49/134 (36%), Gaps = 17/134 (12%)

Query: 490 KDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA 549
                    + K G  +        G  +  T + G  PLH AA  G+++I + LL K  
Sbjct: 5   SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLK-- 62

Query: 550 PVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGV 609
                          GA I A  K   TPL  A   G +   ++LL K A    +G +G+
Sbjct: 63  ---------------GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGL 107

Query: 610 TPLHVASHYDHQNV 623
           T      +   + +
Sbjct: 108 TAFEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  120 bits (303), Expect = 4e-32
 Identities = 32/132 (24%), Positives = 43/132 (32%), Gaps = 17/132 (12%)

Query: 461 TPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITA 520
                A + G+ D     +  G  V+   + G   LH +A  GQ E+   L   GA I A
Sbjct: 9   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 68

Query: 521 TTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLH 580
             K   TPL  A   G +   ++LL K                 GA  T     G T   
Sbjct: 69  PDKHHITPLLSAVYEGHVSCVKLLLSK-----------------GADKTVKGPDGLTAFE 111

Query: 581 LAAKYGRMKIAQ 592
                    + Q
Sbjct: 112 ATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  118 bits (299), Expect = 1e-31
 Identities = 25/112 (22%), Positives = 43/112 (38%)

Query: 160 DGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAG 219
                   A ++G  + +   + KG  +    + G  PLH A+          L+  GA 
Sbjct: 6   MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD 65

Query: 220 VDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKN 271
           ++     ++T L  A + GHV   K LL + AD   +  +G T       + 
Sbjct: 66  INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  117 bits (295), Expect = 4e-31
 Identities = 28/126 (22%), Positives = 43/126 (34%), Gaps = 8/126 (6%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
                   A K           +   K  + +  D N     G  PLH A    + +++E
Sbjct: 6   MCDKEFMWALKNG--------DLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILE 57

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN 378
            LL  GA I A  +  +TPL  A + G ++    LL  GA        G T         
Sbjct: 58  FLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117

Query: 379 QTDIVR 384
              +++
Sbjct: 118 IKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  115 bits (292), Expect = 1e-30
 Identities = 28/110 (25%), Positives = 38/110 (34%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA 359
                   A K      V+  +  G  +  T E G  PLH A+  G + I  FLL  GA 
Sbjct: 6   MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD 65

Query: 360 PDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR 409
            +       TPL  A        V++LL  GA    +  +  T       
Sbjct: 66  INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  107 bits (270), Expect = 1e-27
 Identities = 25/100 (25%), Positives = 42/100 (42%)

Query: 705 KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA 764
                      +   ++     +  G +++   + G  PLH A+  GQL ++ +L+  GA
Sbjct: 5   SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGA 64

Query: 765 NVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           ++NA      TPL  A  +G V  + LLL  GA       
Sbjct: 65  DINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGP 104

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 88.2 bits (220), Expect = 5e-21
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 13/99 (13%)

Query: 735 PVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG 794
           P+          A   G L+ V+  V  G +VN T   G  PLH A+  G++ I++ LL 
Sbjct: 2   PLGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLL 61

Query: 795 AGAQPNATTN-----LFC--------CATILVKNGAEID 820
            GA  NA        L          C  +L+  GA+  
Sbjct: 62  KGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKT 100

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  122 bits (309), Expect = 2e-33
 Identities = 41/92 (44%), Positives = 62/92 (67%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN 153
           NG TPL++AA+  H  VV+ LL  G +     ++  TPLH+A + G + +V+LL+  GA+
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 154 IEAKTRDGLTPLHCAARSGHDNVIDILIEKGA 185
           + AK ++G TPLH AAR+GH  V+ +L+E GA
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  113 bits (286), Expect = 3e-30
 Identities = 40/89 (44%), Positives = 62/89 (69%)

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
           TPLH+A + G + +V+LL+  GA++ AK ++G TPLH AAR+GH  V+ +L+E GA + +
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGA 218
           K KNG  PLH+A++  H    ++L+  GA
Sbjct: 64  KDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  110 bits (279), Expect = 2e-29
 Identities = 45/92 (48%), Positives = 60/92 (65%)

Query: 607 NGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK 666
           NG TPLH+A+   H  V  LLL+ GA  +A  KNG TPLH+AA+   +++   LLE  A 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 667 PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
            NA+ K G TPLHL+A+ GH ++  LL+E GA
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  108 bits (274), Expect = 1e-28
 Identities = 43/91 (47%), Positives = 64/91 (70%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
           G TPLHLAAR    ++V++LL  GA V+A+ +  +TPLH+A+R G+ ++  LLL+ GA V
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGA 516
           +A  K+G T LH++A+ G  EV  +L E+GA
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  103 bits (260), Expect = 8e-27
 Identities = 41/90 (45%), Positives = 63/90 (70%)

Query: 460 QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASIT 519
           +TPLH+A+R G+ ++  LLL+ GA V+A  K+G T LH++A+ G  EV  +L E+GA + 
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62

Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDA 549
           A  K G TPLHLAA+ G +++ ++LL+  A
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  103 bits (259), Expect = 1e-26
 Identities = 41/92 (44%), Positives = 59/92 (64%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA 359
           NG TPLH+A +    +VV+LLL+ GA + A  ++G TPLH+A+  G + +   LL+AGA 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 360 PDTATVRGETPLHLAARANQTDIVRILLRNGA 391
            +     G TPLHLAAR    ++V++LL  GA
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  103 bits (259), Expect = 1e-26
 Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 33/124 (26%)

Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEI 733
           G TPLHL+A+ GH ++  LL+E GA                                 ++
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGA---------------------------------DV 28

Query: 734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
           +   K G TPLH+A+  G L +V+ L+E GA+VNA    G TPLH A++ G + ++ LLL
Sbjct: 29  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88

Query: 794 GAGA 797
            AGA
Sbjct: 89  EAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  103 bits (259), Expect = 1e-26
 Identities = 42/91 (46%), Positives = 61/91 (67%)

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
           G TPLHLAA+ G +++ ++LL+  A V+++ KNG TPLH+A+   H  V  LLL+ GA  
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
           +A  KNG TPLH+AA+   +++   LLE  A
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  101 bits (254), Expect = 7e-26
 Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 8/100 (8%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
           NG TPLH+A        +   H+ V K LL+  AD NA+  NG TPLH+A +    +VV+
Sbjct: 1   NGRTPLHLA--------ARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVK 52

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGA 358
           LLL+ GA + A  ++G TPLH+A+  G + +   LL+AGA
Sbjct: 53  LLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 99.7 bits (250), Expect = 2e-25
 Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 17/108 (15%)

Query: 525 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK 584
           G TPLHLAA+ G +++ ++LL+                  GA + A  K G TPLHLAA+
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEA-----------------GADVNAKDKNGRTPLHLAAR 44

Query: 585 YGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGA 632
            G +++ ++LL+  A V+++ KNG TPLH+A+   H  V  LLL+ GA
Sbjct: 45  NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 98.6 bits (247), Expect = 6e-25
 Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 33/125 (26%)

Query: 640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT 699
           NG TPLH+AA+   +++   LLE  A  NA+ K G TPLHL+A+ GH ++  LL+E    
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA--- 57

Query: 700 VSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
                                         GA+++   K G TPLH+A+  G L +V+ L
Sbjct: 58  ------------------------------GADVNAKDKNGRTPLHLAARNGHLEVVKLL 87

Query: 760 VENGA 764
           +E GA
Sbjct: 88  LEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 97.4 bits (244), Expect = 1e-24
 Identities = 39/92 (42%), Positives = 58/92 (63%)

Query: 160 DGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAG 219
           +G TPLH AAR+GH  V+ +L+E GA + +K KNG  PLH+A++  H    ++L+  GA 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 220 VDEITVDYLTALHVASHCGHVRVAKTLLDRKA 251
           V+    +  T LH+A+  GH+ V K LL+  A
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 96.3 bits (241), Expect = 3e-24
 Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 17/109 (15%)

Query: 491 DGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAP 550
           +G T LH++A+ G  EV  +L E+GA + A  K G TPLHLAA+ G +++ ++LL+    
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA--- 57

Query: 551 VDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA 599
                         GA + A  K G TPLHLAA+ G +++ ++LL+  A
Sbjct: 58  --------------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 90.9 bits (227), Expect = 3e-22
 Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 8/100 (8%)

Query: 193 NGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
           NG  PLH+A++  H    ++L+  GA V+    +  T LH+A+  GH+ V K LL+  AD
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 253 PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKA 292
            NA+  NG TPLH+A +          H+ V K LL+  A
Sbjct: 61  VNAKDKNGRTPLHLAARN--------GHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 88.6 bits (221), Expect = 2e-21
 Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 26/118 (22%)

Query: 333 SGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGAS 392
           +G TPLH+A+  G + +   LL+AGA  +     G TPLHLAAR    ++V++LL  GA 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 393 VDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGA 450
           V+A+ +                           G TPLHLAAR    ++V++LL  GA
Sbjct: 61  VNAKDKN--------------------------GRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 85.9 bits (214), Expect = 2e-20
 Identities = 31/65 (47%), Positives = 42/65 (64%)

Query: 740 GFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP 799
           G TPLH+A+  G L +V+ L+E GA+VNA    G TPLH A++ G + ++ LLL AGA  
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 800 NATTN 804
           NA   
Sbjct: 62  NAKDK 66

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  118 bits (297), Expect = 2e-31
 Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 3/112 (2%)

Query: 102 AAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDG 161
            +  +H      L+ +G +           L  A + G+   V +L++ GA++ AK ++G
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMG---SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 162 LTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVL 213
            TPLH AAR+GH  V+ +L+E GA + ++ K G     ++    +E    +L
Sbjct: 58  STPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  111 bits (279), Expect = 4e-29
 Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
                +  LV  G+ +     +    L  AA+   D  VR L++ G +     ++  TPL
Sbjct: 5   HHHHHSSGLVPRGSHMGS---DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPL 61

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDIL 180
           H+A + G + +V+LL+  GA++ A+ + G T    +  +G++++ +IL
Sbjct: 62  HLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  111 bits (279), Expect = 4e-29
 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 3/112 (2%)

Query: 433 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
            +  +       L+  G+ + +        L  A+R G  D   +L+ +GA V A  K+G
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSD---LGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 493 YTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
            T LH++A+ G  EV  +L E+GA + A  K G T   ++   G   +A++L
Sbjct: 58  STPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  106 bits (266), Expect = 2e-27
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 3/112 (2%)

Query: 135 ACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNG 194
                       L+ +G+++ +   D    L  AAR+G D+ + IL+  GA + +K KNG
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGS---DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 195 LAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTL 246
             PLH+A++  H    ++L+  GA V        TA  ++   G+  +A+ L
Sbjct: 58  STPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  104 bits (263), Expect = 6e-27
 Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 29/138 (21%)

Query: 374 AARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLA 433
            +  +       L+  G+ + +                                  L  A
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSD-----------------------------LGKKLLEA 31

Query: 434 ARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY 493
           ARA Q D VRIL+ NGA V A+ +   TPLH+A+R G+ ++  LLL+ GA V A  K G 
Sbjct: 32  ARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGK 91

Query: 494 TALHISAKEGQDEVASIL 511
           TA  IS   G +++A IL
Sbjct: 92  TAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  104 bits (262), Expect = 7e-27
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 11/120 (9%)

Query: 234 ASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKAD 293
            S   H   +  L+ R +   +   +    L  A        +        + L+   AD
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGS---DLGKKLLEA--------ARAGQDDEVRILMANGAD 49

Query: 294 PNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFL 353
             A+  NG TPLH+A +    +VV+LLL+ GA + A  + G T   ++   G  ++A  L
Sbjct: 50  VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  103 bits (259), Expect = 2e-26
 Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 615 ASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAG 674
            S + H + +  L+ RG+    +  +    L  AA+  Q D    L+   A   A+ K G
Sbjct: 1   GSSHHHHHHSSGLVPRGSH---MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 675 FTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATI 725
            TPLHL+A+ GH ++  LL+E GA V  Q K G T   +       ++A I
Sbjct: 58  STPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEI 108

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  101 bits (253), Expect = 1e-25
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 20/129 (15%)

Query: 466 ASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKG 525
            S   +   +S L+  G+ + +   D    L  +A+ GQD+   IL  +GA + A  K G
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGS---DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 526 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKY 585
            TPLHLAA+ G +++ ++LL+                  GA + A  K G T   ++   
Sbjct: 58  STPLHLAARNGHLEVVKLLLEA-----------------GADVXAQDKFGKTAFDISIDN 100

Query: 586 GRMKIAQML 594
           G   +A++L
Sbjct: 101 GNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  100 bits (252), Expect = 2e-25
 Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%)

Query: 582 AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNG 641
            + +     +  L+ + + +     +    L  A+     +   +L+  GA   A  KNG
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMG---SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLL 693
            TPLH+AA+   +++   LLE  A   A+ K G T   +S   G+ D++ +L
Sbjct: 58  STPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  100 bits (251), Expect = 2e-25
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 3/111 (2%)

Query: 682 AQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGF 741
           +   H   SS L+  G+ +     +    L   A+  + +   I M NGA++    K G 
Sbjct: 2   SSHHHHHHSSGLVPRGSHMG---SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGS 58

Query: 742 TPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLL 792
           TPLH+A+  G L +V+ L+E GA+V A    G T    +   G   + ++L
Sbjct: 59  TPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 97.6 bits (244), Expect = 2e-24
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 3/108 (2%)

Query: 279 NHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPL 338
           +H   +  L+ R +   +   +    L  A +  +   V +L+  GA +AA  ++G TPL
Sbjct: 5   HHHHHSSGLVPRGSHMGS---DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPL 61

Query: 339 HVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRIL 386
           H+A+  G + +   LL+AGA        G+T   ++      D+  IL
Sbjct: 62  HLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 96.1 bits (240), Expect = 7e-24
 Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 20/129 (15%)

Query: 532 AAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIA 591
            + +     +  L+ + + +                           L  AA+ G+    
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMG--------------------SDLGKKLLEAARAGQDDEV 40

Query: 592 QMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKK 651
           ++L+   A V ++ KNG TPLH+A+   H  V  LLL+ GA   A  K G T   I+   
Sbjct: 41  RILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDN 100

Query: 652 NQMDIATTL 660
              D+A  L
Sbjct: 101 GNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 90.3 bits (225), Expect = 8e-22
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 3/102 (2%)

Query: 308 ACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRG 367
               + +     L+  G+ + +        L  A+  G  +    L+  GA        G
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGS---DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 368 ETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR 409
            TPLHLAAR    ++V++LL  GA V A+ +  +T   ++  
Sbjct: 58  STPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 79.5 bits (197), Expect = 4e-18
 Identities = 29/150 (19%), Positives = 49/150 (32%), Gaps = 47/150 (31%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
              H    + L+       +        L  AA+                          
Sbjct: 3   SHHHHHHSSGLVPRGSHMGSDLGK---KLLEAARA------------------------- 34

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                          GQ++  +IL+ NGA +  +  NG TPL++AA+  H  VV+ LL  
Sbjct: 35  ---------------GQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEA 79

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELL 147
           G +     +   T   ++   G   + E+L
Sbjct: 80  GADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 59.9 bits (146), Expect = 3e-11
 Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 16/86 (18%)

Query: 747 ASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN-- 804
            S     +    LV  G+++ +        L +A++ G+   + +L+  GA   A     
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSD---LGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 805 ---LFCCAT--------ILVKNGAEI 819
              L   A         +L++ GA++
Sbjct: 58  STPLHLAARNGHLEVVKLLLEAGADV 83

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 87.7 bits (217), Expect = 4e-19
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 3/105 (2%)

Query: 413 FSSASQSALTRVRGETPLHLAARANQTDIVRI---LLRNGASVDARAREDQTPLHVASRL 469
            +     A      ET LHLA R+     + I   L++N  ++D +  +  T LH     
Sbjct: 156 LTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLT 215

Query: 470 GNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTES 514
            N +   LLL+  AS++   + G T L I+ +   +    +LT++
Sbjct: 216 DNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 86.2 bits (213), Expect = 1e-18
 Identities = 27/146 (18%), Positives = 48/146 (32%), Gaps = 15/146 (10%)

Query: 270 KNRYKSSHCNHVWVAKTLLDRKADPNA------RALNGFTPLHIAC---KKNRYKVVELL 320
            +  ++     ++          D               T LH+A     +    +V+ L
Sbjct: 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 191

Query: 321 LKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQT 380
           ++   ++   T  G T LH             LL+  A+ + A   GETPL +A R    
Sbjct: 192 VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 251

Query: 381 DIVRILLRNGASVDARAREDQTPLHV 406
               +L        A +    + +HV
Sbjct: 252 HCEELLT------QALSGRFNSHVHV 271

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 83.9 bits (207), Expect = 7e-18
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 3/100 (3%)

Query: 567 SITATTKKGFTPLHLAAKYG---RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNV 623
            +    +   T LHLA +      + I   L+Q    +D Q   G T LH     D+   
Sbjct: 161 PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAEC 220

Query: 624 ALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEY 663
             LLL   AS     ++G TPL IA +         L + 
Sbjct: 221 LKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 81.6 bits (201), Expect = 4e-17
 Identities = 30/123 (24%), Positives = 47/123 (38%), Gaps = 9/123 (7%)

Query: 433 AARANQTDIVRILLRNGASVDA------RAREDQTPLHVASRLGNGD---IASLLLQHGA 483
           A +      +     +G  +            D+T LH+A R  +     I   L+Q+  
Sbjct: 137 AVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG 196

Query: 484 SVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQM 543
           ++D  T  G TALH        E   +L    ASI    + G TPL +A +       ++
Sbjct: 197 NLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEEL 256

Query: 544 LLQ 546
           L Q
Sbjct: 257 LTQ 259

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 79.7 bits (196), Expect = 2e-16
 Identities = 35/206 (16%), Positives = 66/206 (32%), Gaps = 30/206 (14%)

Query: 278 CNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTP 337
            N +       +    PN  +       +I  K    +         A+   +    +  
Sbjct: 81  FNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKT 140

Query: 338 LHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRI---LLRNGASVD 394
             +   +      + L +     +      ET LHLA R+     + I   L++N  ++D
Sbjct: 141 RDIFGLLQAYADGVDLTEKIPLANGHE-PDETALHLAVRSVDRTSLHIVDFLVQNSGNLD 199

Query: 395 ARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDA 454
            +  +  T LH                               +  + +++LLR  AS++ 
Sbjct: 200 KQTGKGSTALHY--------------------------CCLTDNAECLKLLLRGKASIEI 233

Query: 455 RAREDQTPLHVASRLGNGDIASLLLQ 480
                +TPL +A RL +     LL Q
Sbjct: 234 ANESGETPLDIAKRLKHEHCEELLTQ 259

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 79.3 bits (195), Expect = 2e-16
 Identities = 29/129 (22%), Positives = 46/129 (35%), Gaps = 11/129 (8%)

Query: 234 ASHCGHVRVAKTLLDRKADPNA------RALNGFTPLHIACKKNRYKSSHCNHVWVAKTL 287
           A     +           D               T LH+A      +S     + +   L
Sbjct: 137 AVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAV-----RSVDRTSLHIVDFL 191

Query: 288 LDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCM 347
           +    + + +   G T LH  C  +  + ++LLL+  ASI    ESG TPL +A  +   
Sbjct: 192 VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 251

Query: 348 NIAIFLLQA 356
           +    L QA
Sbjct: 252 HCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 79.3 bits (195), Expect = 2e-16
 Identities = 34/167 (20%), Positives = 53/167 (31%), Gaps = 41/167 (24%)

Query: 308 ACKKNRYKVVELLLKYGASIAA------TTESGLTPLHVASFMG---CMNIAIFLLQAGA 358
           A K      +      G  +          E   T LH+A        ++I  FL+Q   
Sbjct: 137 AVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG 196

Query: 359 APDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQ 418
             D  T +G T LH     +  + +++LLR  AS++                        
Sbjct: 197 NLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEI----------------------- 233

Query: 419 SALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHV 465
                  GETPL +A R        +L        A +    + +HV
Sbjct: 234 ---ANESGETPLDIAKRLKHEHCEELLT------QALSGRFNSHVHV 271

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 76.6 bits (188), Expect = 2e-15
 Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 115 LSKGGNQTLATEHNITPLHVACKWGK---VAMVELLISKGANIEAKTRDGLTPLHCAARS 171
           L++        E + T LH+A +      + +V+ L+    N++ +T  G T LH    +
Sbjct: 156 LTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLT 215

Query: 172 GHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLI 214
            +   + +L+   A++    ++G  PL +A +  HE    +L 
Sbjct: 216 DNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 73.5 bits (180), Expect = 2e-14
 Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 3/98 (3%)

Query: 701 SHQAKNGLTPLHLCAQEDKVNVATITMF---NGAEIDPVTKAGFTPLHIASHFGQLNMVR 757
           ++  +   T LHL  +        I  F   N   +D  T  G T LH          ++
Sbjct: 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLK 222

Query: 758 YLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGA 795
            L+   A++      G TPL  A +       +LL  A
Sbjct: 223 LLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 72.7 bits (178), Expect = 4e-14
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 3/92 (3%)

Query: 94  NGFTPLYMA---AQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISK 150
              T L++A          +V +L+   GN    T    T LH  C       ++LL+  
Sbjct: 168 PDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRG 227

Query: 151 GANIEAKTRDGLTPLHCAARSGHDNVIDILIE 182
            A+IE     G TPL  A R  H++  ++L +
Sbjct: 228 KASIEIANESGETPLDIAKRLKHEHCEELLTQ 259

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 72.3 bits (177), Expect = 4e-14
 Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 3/92 (3%)

Query: 607 NGVTPLHVASHYDHQN---VALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEY 663
              T LH+A     +    +   L+    +       G T LH     +  +    LL  
Sbjct: 168 PDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRG 227

Query: 664 NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIE 695
            A     +++G TPL ++ +  H     LL +
Sbjct: 228 KASIEIANESGETPLDIAKRLKHEHCEELLTQ 259

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 70.0 bits (171), Expect = 3e-13
 Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 4/146 (2%)

Query: 583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGY 642
           AKY   + A+      A         V    +          + L ++    +   +   
Sbjct: 112 AKYMERRYARKKHADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANG-HEPDE 170

Query: 643 TPLHIA---AKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT 699
           T LH+A     +  + I   L++ +   + ++  G T LH      + +   LL+   A+
Sbjct: 171 TALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS 230

Query: 700 VSHQAKNGLTPLHLCAQEDKVNVATI 725
           +    ++G TPL +  +    +   +
Sbjct: 231 IEIANESGETPLDIAKRLKHEHCEEL 256

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 66.9 bits (163), Expect = 3e-12
 Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 28/132 (21%)

Query: 491 DGYTALHISAKEGQDEVASI---LTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 547
              TALH++ +        I   L ++  ++   T KG T LH        +  ++LL+ 
Sbjct: 168 PDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR- 226

Query: 548 DAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKN 607
                             ASI    + G TPL +A +       ++L         Q  +
Sbjct: 227 ----------------GKASIEIANESGETPLDIAKRLKHEHCEELLT--------QALS 262

Query: 608 GVTPLHVASHYD 619
           G    HV   Y+
Sbjct: 263 GRFNSHVHVEYE 274

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 65.4 bits (159), Expect = 1e-11
 Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 20/115 (17%)

Query: 517 SITATTKKGFTPLHLAAKYG---RMKIAQMLLQKDAPVDSQGKVASILTESGASITATTK 573
            +    +   T LHLA +      + I   L+Q                 +  ++   T 
Sbjct: 161 PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ-----------------NSGNLDKQTG 203

Query: 574 KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLL 628
           KG T LH        +  ++LL+  A ++   ++G TPL +A    H++   LL 
Sbjct: 204 KGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 62.7 bits (152), Expect = 7e-11
 Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 3/95 (3%)

Query: 674 GFTPLHL---SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNG 730
             T LHL   S       +   L+++   +  Q   G T LH C   D      + +   
Sbjct: 169 DETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGK 228

Query: 731 AEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN 765
           A I+   ++G TPL IA      +    L +  + 
Sbjct: 229 ASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 3/78 (3%)

Query: 197 PLHMASQGDHEAATRV---LIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADP 253
            LH+A +     +  +   L+ +   +D+ T    TALH      +    K LL  KA  
Sbjct: 172 ALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASI 231

Query: 254 NARALNGFTPLHIACKKN 271
                +G TPL IA +  
Sbjct: 232 EIANESGETPLDIAKRLK 249

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 59.2 bits (143), Expect = 1e-09
 Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 3/66 (4%)

Query: 740 GFTPLHIASHFGQLN---MVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG 796
             T LH+A          +V +LV+N  N++  T  G T LH          + LLL   
Sbjct: 169 DETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGK 228

Query: 797 AQPNAT 802
           A     
Sbjct: 229 ASIEIA 234

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 55.0 bits (132), Expect = 3e-08
 Identities = 18/77 (23%), Positives = 32/77 (41%)

Query: 77  VAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVAC 136
           +   LV N   ++ Q+  G T L+     ++   ++ LL    +  +A E   TPL +A 
Sbjct: 187 IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 246

Query: 137 KWGKVAMVELLISKGAN 153
           +       ELL    + 
Sbjct: 247 RLKHEHCEELLTQALSG 263

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 14/117 (11%)

Query: 25  ALHIAAKKDD--CKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILV 82
           ALH+A +  D         L  +  N   +    +T L               E  K+L+
Sbjct: 172 ALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLT------DNAECLKLLL 225

Query: 83  DNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWG 139
              A+I + + +G TPL +A +  H+     L      +     H    +HV  +W 
Sbjct: 226 RGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF--NSH----VHVEYEWR 276

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 81.6 bits (201), Expect = 5e-17
 Identities = 28/146 (19%), Positives = 49/146 (33%), Gaps = 15/146 (10%)

Query: 270 KNRYKSSHCNHVWVAKTLLDRKADPNA------RALNGFTPLHIAC---KKNRYKVVELL 320
           +  + +     +           D                 LH+A     +    +V+ +
Sbjct: 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFI 212

Query: 321 LKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQT 380
           ++ G  + A    G T LH A+     +    LL+  A   T    GET L +A + +  
Sbjct: 213 IQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHK 272

Query: 381 DIVRILLRNGASVDARAREDQTPLHV 406
           +   +L        A+A     PLHV
Sbjct: 273 ECEELL------EQAQAGTFAFPLHV 292

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 81.2 bits (200), Expect = 9e-17
 Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 9/125 (7%)

Query: 431 HLAARANQTDIVRILLRNGASVDA------RAREDQTPLHVASRLGNGD---IASLLLQH 481
             A        V     NG               ++  LH+A ++ N     +   ++Q+
Sbjct: 156 WTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 215

Query: 482 GASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIA 541
           G  +DA   DG TALH +A   Q +   +L +  A +    + G T L +A K    +  
Sbjct: 216 GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECE 275

Query: 542 QMLLQ 546
           ++L Q
Sbjct: 276 ELLEQ 280

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 78.5 bits (193), Expect = 5e-16
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 3/92 (3%)

Query: 574 KGFTPLHLAAKYGRMK---IAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDR 630
                LHLA K        +   ++Q    +D++  +G T LH A+ Y+  +   LLL  
Sbjct: 189 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKG 248

Query: 631 GASPHAVAKNGYTPLHIAAKKNQMDIATTLLE 662
            A    V + G T L IA KK+  +    L +
Sbjct: 249 RALVGTVNEAGETALDIARKKHHKECEELLEQ 280

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 78.5 bits (193), Expect = 6e-16
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 426 GETPLHLAARA---NQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
            E  LHLA +        +V  +++NG  +DA+A +  T LH A+     D   LLL+  
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 249

Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTES 514
           A V    + G TAL I+ K+   E   +L ++
Sbjct: 250 ALVGTVNEAGETALDIARKKHHKECEELLEQA 281

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 77.7 bits (191), Expect = 1e-15
 Identities = 35/169 (20%), Positives = 51/169 (30%), Gaps = 41/169 (24%)

Query: 306 HIACKKNRYKVVELLLKYGASI------AATTESGLTPLHVASFMG---CMNIAIFLLQA 356
             A        V      G                   LH+A  +     + +  F++Q 
Sbjct: 156 WTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 215

Query: 357 GAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSA 416
           G   D     G T LH AA  NQ D +++LL+  A V                       
Sbjct: 216 GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEA----------------- 258

Query: 417 SQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHV 465
                    GET L +A + +  +   +L        A+A     PLHV
Sbjct: 259 ---------GETALDIARKKHHKECEELL------EQAQAGTFAFPLHV 292

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 77.3 bits (190), Expect = 1e-15
 Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 29/117 (24%)

Query: 367 GETPLHLAARA---NQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTR 423
            E  LHLA +        +V  +++NG  +DA+A                          
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKA-------------------------- 223

Query: 424 VRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQ 480
             G T LH AA  NQ D +++LL+  A V       +T L +A +  + +   LL Q
Sbjct: 224 ADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQ 280

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 73.1 bits (179), Expect = 3e-14
 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 3/94 (3%)

Query: 124 ATEHNITPLHVACKWGK---VAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDIL 180
           A       LH+A K      + +V+ +I  G +++AK  DG T LH AA     + + +L
Sbjct: 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLL 245

Query: 181 IEKGAALYSKTKNGLAPLHMASQGDHEAATRVLI 214
           ++  A + +  + G   L +A +  H+    +L 
Sbjct: 246 LKGRALVGTVNEAGETALDIARKKHHKECEELLE 279

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 68.5 bits (167), Expect = 1e-12
 Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 3/92 (3%)

Query: 707 GLTPLHLCAQEDKVNVATITMF---NGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENG 763
               LHL  +        +  F   NG  +D     G T LH A+ + Q + ++ L++  
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 249

Query: 764 ANVNATTNLGYTPLHQASQQGRVLIIDLLLGA 795
           A V      G T L  A ++      +LL  A
Sbjct: 250 ALVGTVNEAGETALDIARKKHHKECEELLEQA 281

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 67.3 bits (164), Expect = 3e-12
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 608 GVTPLHVASHYDHQN---VALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN 664
               LH+A    +Q    +   ++  G    A A +G T LH AA  NQ D    LL+  
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 249

Query: 665 AKPNAESKAGFTPLHLSAQEGHTDMSSLLIE 695
           A     ++AG T L ++ ++ H +   LL +
Sbjct: 250 ALVGTVNEAGETALDIARKKHHKECEELLEQ 280

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 65.4 bits (159), Expect = 1e-11
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 3/91 (3%)

Query: 95  GFTPLYMAAQENHDG---VVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKG 151
               L++A +  +     +V +++  GG+         T LH A  + +   ++LL+   
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 249

Query: 152 ANIEAKTRDGLTPLHCAARSGHDNVIDILIE 182
           A +      G T L  A +  H    ++L +
Sbjct: 250 ALVGTVNEAGETALDIARKKHHKECEELLEQ 280

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 64.2 bits (156), Expect = 3e-11
 Identities = 27/152 (17%), Positives = 48/152 (31%), Gaps = 26/152 (17%)

Query: 454 ARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTK------DGYTALHIS---AKEGQ 504
            R   +   L  A    +         +G     P             LH++   A +  
Sbjct: 146 RRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQAS 205

Query: 505 DEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTES 564
             +   + ++G  + A    G T LH AA Y +    ++LL+                  
Sbjct: 206 LPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLK-----------------G 248

Query: 565 GASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 596
            A +    + G T L +A K    +  ++L Q
Sbjct: 249 RALVGTVNEAGETALDIARKKHHKECEELLEQ 280

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 63.5 bits (154), Expect = 5e-11
 Identities = 27/133 (20%), Positives = 43/133 (32%), Gaps = 17/133 (12%)

Query: 199 HMASQGDHEAATRVLIYHGAGVDEITV------DYLTALHVASHCGH---VRVAKTLLDR 249
             A       +      +G    +              LH+A    +   + +   ++  
Sbjct: 156 WTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 215

Query: 250 KADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIAC 309
               +A+A +G T LH A           N     K LL  +A        G T L IA 
Sbjct: 216 GGHLDAKAADGNTALHYAAL--------YNQPDCLKLLLKGRALVGTVNEAGETALDIAR 267

Query: 310 KKNRYKVVELLLK 322
           KK+  +  ELL +
Sbjct: 268 KKHHKECEELLEQ 280

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 61.2 bits (148), Expect = 3e-10
 Identities = 26/107 (24%), Positives = 39/107 (36%), Gaps = 20/107 (18%)

Query: 524 KGFTPLHLAAKYGRMK---IAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLH 580
                LHLA K        +   ++Q                 +G  + A    G T LH
Sbjct: 189 PEELVLHLAVKVANQASLPLVDFIIQ-----------------NGGHLDAKAADGNTALH 231

Query: 581 LAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLL 627
            AA Y +    ++LL+  A V +  + G T L +A    H+    LL
Sbjct: 232 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 278

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 61.2 bits (148), Expect = 3e-10
 Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 11/131 (8%)

Query: 613 HVASHYDHQNVALLLLDRGASPHAVAKN------GYTPLHIA---AKKNQMDIATTLLEY 663
             A         L     G                   LH+A   A +  + +   +++ 
Sbjct: 156 WTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 215

Query: 664 NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
               +A++  G T LH +A     D   LL++  A V    + G T L   A++   +  
Sbjct: 216 GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALD-IARKKH-HKE 273

Query: 724 TITMFNGAEID 734
              +   A+  
Sbjct: 274 CEELLEQAQAG 284

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 61.2 bits (148), Expect = 4e-10
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 3/81 (3%)

Query: 194 GLAPLHMASQGDHEAATRV---LIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRK 250
               LH+A +  ++A+  +   +I +G  +D    D  TALH A+        K LL  +
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 249

Query: 251 ADPNARALNGFTPLHIACKKN 271
           A        G T L IA KK+
Sbjct: 250 ALVGTVNEAGETALDIARKKH 270

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 60.8 bits (147), Expect = 4e-10
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 740 GFTPLHIASHFG---QLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG 796
               LH+A        L +V ++++NG +++A    G T LH A+   +   + LLL   
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 249

Query: 797 AQPNAT 802
           A     
Sbjct: 250 ALVGTV 255

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 59.6 bits (144), Expect = 1e-09
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)

Query: 674 GFTPLHLS---AQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNG 730
               LHL+   A +    +   +I++G  +  +A +G T LH  A  ++ +   + +   
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 249

Query: 731 AEIDPVTKAGFTPLHIA 747
           A +  V +AG T L IA
Sbjct: 250 ALVGTVNEAGETALDIA 266

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 58.1 bits (140), Expect = 4e-09
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 6/90 (6%)

Query: 77  VAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVAC 136
           +   ++ NG  ++ ++ +G T L+ AA  N    ++ LL          E   T L +A 
Sbjct: 208 LVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIAR 267

Query: 137 KWGKVAMVELLISKGANIEAKTRDGLTPLH 166
           K       ELL       +A+      PLH
Sbjct: 268 KKHHKECEELL------EQAQAGTFAFPLH 291

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 55.0 bits (132), Expect = 3e-08
 Identities = 26/131 (19%), Positives = 45/131 (34%), Gaps = 11/131 (8%)

Query: 133 HVACKWGKVAMVELLISKGANIEAKTR------DGLTPLHCAARSGHDN---VIDILIEK 183
             A     +  V    + G +                 LH A +  +     ++D +I+ 
Sbjct: 156 WTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 215

Query: 184 GAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVA 243
           G  L +K  +G   LH A+  +     ++L+   A V  +     TAL +A    H    
Sbjct: 216 GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECE 275

Query: 244 KTLLDRKADPN 254
             LL  +A   
Sbjct: 276 -ELL-EQAQAG 284

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 81.0 bits (199), Expect = 2e-16
 Identities = 38/131 (29%), Positives = 49/131 (37%), Gaps = 4/131 (3%)

Query: 564 SGASITATT--KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQ 621
            GA +      +   TPL  A     +   + LLQ  A V+     G  PLH A+   H 
Sbjct: 222 HGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHT 281

Query: 622 NVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLS 681
            +A L L RGA   A    G  PL IA +    DI T L    AK      A       +
Sbjct: 282 GLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRL--AKMREAEAAQGQAGDET 339

Query: 682 AQEGHTDMSSL 692
             +   D S +
Sbjct: 340 YLDIFRDFSLM 350

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 79.8 bits (196), Expect = 5e-16
 Identities = 31/121 (25%), Positives = 51/121 (42%)

Query: 391 ASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGA 450
            ++  RA      L   +      +            TPL  A  AN       LL+NGA
Sbjct: 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGA 259

Query: 451 SVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASI 510
           +V+      + PLH A+ LG+  +A L L+ GA + A   +G   L I+ +    ++ ++
Sbjct: 260 NVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTL 319

Query: 511 L 511
           L
Sbjct: 320 L 320

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 79.4 bits (195), Expect = 7e-16
 Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 2/115 (1%)

Query: 275 SSHCNHVWVAKTLLDRKADPNAR--ALNGFTPLHIACKKNRYKVVELLLKYGASIAATTE 332
           S H   +      L   AD N      +  TPL  A   N     E LL+ GA++     
Sbjct: 207 SGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADS 266

Query: 333 SGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILL 387
           +G  PLH A+ +G   +A   L+ GA        G  PL +A      DIV +L 
Sbjct: 267 AGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLR 321

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 77.5 bits (190), Expect = 3e-15
 Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 2/151 (1%)

Query: 398 REDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDAR-- 455
            +        S   +    S+   +   G      +        +   L +GA V+    
Sbjct: 172 PKPSIRPRPGSLRSKPEPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNG 231

Query: 456 AREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESG 515
            +++ TPL  A+   +      LLQ+GA+V+     G   LH +   G   +A +  + G
Sbjct: 232 GQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRG 291

Query: 516 ASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
           A + A   +G  PL +A +     I  +L  
Sbjct: 292 ADLGARDSEGRDPLTIAMETANADIVTLLRL 322

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 77.5 bits (190), Expect = 3e-15
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 2/163 (1%)

Query: 250 KADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIAC 309
              P  R   G             K S        ++  +  ++       G      + 
Sbjct: 149 TKLPEIRGRRGGRGRPRGQPPVPPKPSIRPRPGSLRSKPEPPSEDLGSLHPGALLFRASG 208

Query: 310 KKNRYKVVELLLKYGASIAATT--ESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRG 367
                  +   L +GA +      +   TPL  A+    +    FLLQ GA  + A   G
Sbjct: 209 HPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAG 268

Query: 368 ETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRL 410
             PLH A     T +  + L+ GA + AR  E + PL +A   
Sbjct: 269 RGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMET 311

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 76.4 bits (187), Expect = 6e-15
 Identities = 36/154 (23%), Positives = 50/154 (32%), Gaps = 28/154 (18%)

Query: 329 ATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATV--RGETPLHLAARANQTDIVRIL 386
            +   G      +     +      L  GA  +         TPL  A  AN       L
Sbjct: 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFL 254

Query: 387 LRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILL 446
           L+NGA+V+                               G  PLH A     T +  + L
Sbjct: 255 LQNGANVNQAD--------------------------SAGRGPLHHATILGHTGLACLFL 288

Query: 447 RNGASVDARAREDQTPLHVASRLGNGDIASLLLQ 480
           + GA + AR  E + PL +A    N DI +LL  
Sbjct: 289 KRGADLGARDSEGRDPLTIAMETANADIVTLLRL 322

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 72.9 bits (178), Expect = 8e-14
 Identities = 32/128 (25%), Positives = 42/128 (32%), Gaps = 10/128 (7%)

Query: 231 LHVASHCGHVRVAKTLLDRKADPNAR--ALNGFTPLHIACKKNRYKSSHCNHVWVAKTLL 288
              + H   +      L   AD N      +  TPL  A   N         +   + LL
Sbjct: 204 FRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAAN--------SLLACEFLL 255

Query: 289 DRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMN 348
              A+ N     G  PLH A       +  L LK GA + A    G  PL +A      +
Sbjct: 256 QNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANAD 315

Query: 349 IAIFLLQA 356
           I   L  A
Sbjct: 316 IVTLLRLA 323

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 71.4 bits (174), Expect = 3e-13
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 2/102 (1%)

Query: 81  LVDNGATINVQ--SLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKW 138
            + +GA +N      +  TPL  A   N      +LL  G N   A      PLH A   
Sbjct: 219 ALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278

Query: 139 GKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDIL 180
           G   +  L + +GA++ A+  +G  PL  A  + + +++ +L
Sbjct: 279 GHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLL 320

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 71.0 bits (173), Expect = 4e-13
 Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 3/119 (2%)

Query: 98  PLYMAAQENHDGVVRYLLSKGG---NQTLATEHNITPLHVACKWGKVAMVELLISKGANI 154
            L+ A+               G   N     + N TPL  A     +   E L+  GAN+
Sbjct: 202 LLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV 261

Query: 155 EAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVL 213
                 G  PLH A   GH  +  + +++GA L ++   G  PL +A +  +     +L
Sbjct: 262 NQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLL 320

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 68.3 bits (166), Expect = 3e-12
 Identities = 31/141 (21%), Positives = 53/141 (37%), Gaps = 2/141 (1%)

Query: 662 EYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQ--AKNGLTPLHLCAQEDK 719
           E  ++       G      S         +  + HGA V+     ++  TPL      + 
Sbjct: 188 EPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANS 247

Query: 720 VNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQ 779
           +      + NGA ++    AG  PLH A+  G   +    ++ GA++ A  + G  PL  
Sbjct: 248 LLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTI 307

Query: 780 ASQQGRVLIIDLLLGAGAQPN 800
           A +     I+ LL  A  +  
Sbjct: 308 AMETANADIVTLLRLAKMREA 328

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 66.3 bits (161), Expect = 1e-11
 Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 2/120 (1%)

Query: 608 GVTPLHVASHYDHQNVALLLLDRGASPHAV--AKNGYTPLHIAAKKNQMDIATTLLEYNA 665
           G      + H          L  GA  + V   ++  TPL  A   N +     LL+  A
Sbjct: 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGA 259

Query: 666 KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATI 725
             N    AG  PLH +   GHT ++ L ++ GA +  +   G  PL +  +    ++ T+
Sbjct: 260 NVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTL 319

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 65.2 bits (158), Expect = 3e-11
 Identities = 25/96 (26%), Positives = 40/96 (41%)

Query: 598 DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIA 657
           D    + G++  TPL  A+  +       LL  GA+ +     G  PLH A       +A
Sbjct: 225 DVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLA 284

Query: 658 TTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLL 693
              L+  A   A    G  PL ++ +  + D+ +LL
Sbjct: 285 CLFLKRGADLGARDSEGRDPLTIAMETANADIVTLL 320

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 64.8 bits (157), Expect = 3e-11
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 2/110 (1%)

Query: 695 EHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVT--KAGFTPLHIASHFGQ 752
           E  +        G            +      + +GA+++ V   +   TPL  A+    
Sbjct: 188 EPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANS 247

Query: 753 LNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT 802
           L    +L++NGANVN   + G  PLH A+  G   +  L L  GA   A 
Sbjct: 248 LLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGAR 297

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 63.6 bits (154), Expect = 8e-11
 Identities = 36/176 (20%), Positives = 51/176 (28%), Gaps = 10/176 (5%)

Query: 148 ISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHE 207
           I        + R         +       +    E  +        G      +      
Sbjct: 154 IRGRRGGRGRPRGQPPVPPKPSIRPRPGSLRSKPEPPSEDLGSLHPGALLFRASGHPPSL 213

Query: 208 AATRVLIYHGAGVDEITVDY--LTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLH 265
                 + HGA V+ +       T L  A+    +   + LL   A+ N     G  PLH
Sbjct: 214 PTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLH 273

Query: 266 IACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLL 321
            A            H  +A   L R AD  AR   G  PL IA +     +V LL 
Sbjct: 274 HATI--------LGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLR 321

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 56.3 bits (135), Expect = 2e-08
 Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 2/105 (1%)

Query: 146 LLISKGANIEAKT--RDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQ 203
             ++ GA++      +D  TPL  A  +      + L++ GA +      G  PLH A+ 
Sbjct: 218 DALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277

Query: 204 GDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLD 248
             H     + +  GA +     +    L +A    +  +   L  
Sbjct: 278 LGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRL 322

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 52.1 bits (124), Expect = 4e-07
 Identities = 20/78 (25%), Positives = 30/78 (38%)

Query: 70  EATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNI 129
            A       + L+ NGA +N     G  PL+ A    H G+    L +G +         
Sbjct: 243 TAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGR 302

Query: 130 TPLHVACKWGKVAMVELL 147
            PL +A +     +V LL
Sbjct: 303 DPLTIAMETANADIVTLL 320

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 73.8 bits (181), Expect = 8e-14
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 3/87 (3%)

Query: 130 TPLHVACKW---GKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAA 186
             LH+A K      + +V+ +I  G +++AK  DG T LH AA     + + +L++  A 
Sbjct: 173 LVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRAL 232

Query: 187 LYSKTKNGLAPLHMASQGDHEAATRVL 213
           + +  + G   L +A +  H+    +L
Sbjct: 233 VGTVNEAGETALDIARKKHHKECEELL 259

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 73.4 bits (180), Expect = 1e-13
 Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 9/141 (6%)

Query: 410 LRRFSSASQSALTRV-RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR 468
            RR +   Q   T +   +    L A AN  D  + L    A            LH+A +
Sbjct: 126 ARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEE-----LVLHLAVK 180

Query: 469 LGNGD---IASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKG 525
           + N     +   ++Q+G  +DA   DG TALH +A   Q +   +L +  A +    + G
Sbjct: 181 VANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAG 240

Query: 526 FTPLHLAAKYGRMKIAQMLLQ 546
            T L +A K    +  ++L Q
Sbjct: 241 ETALDIARKKHHKECEELLEQ 261

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 68.8 bits (168), Expect = 3e-12
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 332 ESGLTPLHVASFM---GCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLR 388
                 LH+A  +     + +  F++Q G   D     G T LH AA  NQ D +++LL+
Sbjct: 169 APEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLK 228

Query: 389 NGASVDARAREDQTPLHVASRLR 411
             A V       +T L +A +  
Sbjct: 229 GRALVGTVNEAGETALDIARKKH 251

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 64.2 bits (156), Expect = 8e-11
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 3/91 (3%)

Query: 573 KKGFTPLHLA---AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLD 629
                 LHLA   A    + +   ++Q    +D++  +G T LH A+ Y+  +   LLL 
Sbjct: 169 APEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLK 228

Query: 630 RGASPHAVAKNGYTPLHIAAKKNQMDIATTL 660
             A    V + G T L IA KK+  +    L
Sbjct: 229 GRALVGTVNEAGETALDIARKKHHKECEELL 259

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 63.8 bits (155), Expect = 1e-10
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
                LH+A K     S       +   ++      +A+A +G T LH A   N+   ++
Sbjct: 170 PEELVLHLAVKVANQASLP-----LVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLK 224

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQA 356
           LLLK  A +    E+G T L +A           L QA
Sbjct: 225 LLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA 262

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 58.8 bits (142), Expect = 5e-09
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 600 PVDSQGKNGVTPLHVA-SHYDHQNVAL--LLLDRGASPHAVAKNGYTPLHIAAKKNQMDI 656
           P           LH+A    +  ++ L   ++  G    A A +G T LH AA  NQ D 
Sbjct: 163 PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDC 222

Query: 657 ATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLL 693
              LL+  A     ++AG T L ++ ++ H +   LL
Sbjct: 223 LKLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 259

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 58.0 bits (140), Expect = 8e-09
 Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 13/120 (10%)

Query: 688 DMSSLL--IEHGATVS------HQAKNGLTPLHL-CAQEDKVNVATITMF---NGAEIDP 735
           D+ S+L    +G                   LHL     ++ ++  +  F   NG  +D 
Sbjct: 144 DLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLP-LVDFIIQNGGHLDA 202

Query: 736 VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGA 795
               G T LH A+ + Q + ++ L++  A V      G T L  A ++      +LL  A
Sbjct: 203 KAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA 262

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 54.9 bits (132), Expect = 7e-08
 Identities = 29/129 (22%), Positives = 45/129 (34%), Gaps = 26/129 (20%)

Query: 502 EGQDEVASILTESGASITATTKKGFTPLHLA---AKYGRMKIAQMLLQKDAPVDSQGKVA 558
            GQD    +      +           LHLA   A    + +   ++Q            
Sbjct: 154 NGQDFGQPLPGPDAQA------PEELVLHLAVKVANQASLPLVDFIIQ------------ 195

Query: 559 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY 618
                +G  + A    G T LH AA Y +    ++LL+  A V +  + G T L +A   
Sbjct: 196 -----NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKK 250

Query: 619 DHQNVALLL 627
            H+    LL
Sbjct: 251 HHKECEELL 259

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 53.7 bits (129), Expect = 2e-07
 Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 3/90 (3%)

Query: 94  NGFTPLYMAAQENHDG---VVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISK 150
                L++A +  +     +V +++  GG+         T LH A  + +   ++LL+  
Sbjct: 170 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKG 229

Query: 151 GANIEAKTRDGLTPLHCAARSGHDNVIDIL 180
            A +      G T L  A +  H    ++L
Sbjct: 230 RALVGTVNEAGETALDIARKKHHKECEELL 259

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 51.8 bits (124), Expect = 7e-07
 Identities = 26/143 (18%), Positives = 46/143 (32%), Gaps = 20/143 (13%)

Query: 583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAV----- 637
           AKY    +     ++  P   +       L  A         L     G           
Sbjct: 118 AKY----VEHRFARRCTPEPQR-------LWTAICNRDLLSVLEAFANGQDFGQPLPGPD 166

Query: 638 -AKNGYTPLHIA---AKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLL 693
                   LH+A   A +  + +   +++     +A++  G T LH +A     D   LL
Sbjct: 167 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLL 226

Query: 694 IEHGATVSHQAKNGLTPLHLCAQ 716
           ++  A V    + G T L +  +
Sbjct: 227 LKGRALVGTVNEAGETALDIARK 249

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 51.4 bits (123), Expect = 7e-07
 Identities = 22/90 (24%), Positives = 30/90 (33%), Gaps = 6/90 (6%)

Query: 192 KNGLAPLHMA---SQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLD 248
                 LH+A   +          +I +G  +D    D  TALH A+        K LL 
Sbjct: 169 APEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLK 228

Query: 249 RKADPNARALNGFTPLHIACKKNRYKSSHC 278
            +A        G T L IA    +     C
Sbjct: 229 GRALVGTVNEAGETALDIA---RKKHHKEC 255

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 48.0 bits (114), Expect = 1e-05
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 3/90 (3%)

Query: 160 DGLTPLHCAARSGHDN---VIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYH 216
                LH A +  +     ++D +I+ G  L +K  +G   LH A+  +     ++L+  
Sbjct: 170 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKG 229

Query: 217 GAGVDEITVDYLTALHVASHCGHVRVAKTL 246
            A V  +     TAL +A    H    + L
Sbjct: 230 RALVGTVNEAGETALDIARKKHHKECEELL 259

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.6 bits (133), Expect = 5e-08
 Identities = 85/677 (12%), Positives = 189/677 (27%), Gaps = 194/677 (28%)

Query: 1   MQQGHDRVVAVLLENDTKGKVKLPALHIAAKKD-DCKAAALLLEVSFSNTKLE--VSLSN 57
            Q  +  +++V  +              A   + DCK    + +   S  +++  +   +
Sbjct: 14  HQYQYKDILSVFED--------------AFVDNFDCKDVQDMPKSILSKEEIDHIIMSKD 59

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                        +  QEE+ +  V+    IN + L   +P+    ++       Y+  +
Sbjct: 60  AVSGTLRLFWTLLSK-QEEMVQKFVEEVLRINYKFL--MSPIKTEQRQPSMMTRMYIEQR 116

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLH----C------ 167
             ++           +V+    ++     L  + A +E +    +  +            
Sbjct: 117 --DRLYNDNQVFAKYNVS----RLQPYLKL--RQALLELRPAKNVL-IDGVLGSGKTWVA 167

Query: 168 --AARS----------------GHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAA 209
                S                 + N  + ++E    L  +           S+ DH + 
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT-----SRSDHSSN 222

Query: 210 TRVLIYHGAGVDEITV---DYLTAL----HVAS---------HCGHVRVAKTLLDRKADP 253
            ++ I+         +    Y   L    +V +          C      K LL  +   
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC------KILLTTRFKQ 276

Query: 254 NARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKAD------PNARALNGFTPLHI 307
               L+  T  HI+   +    +        K+LL +  D      P    L    P  +
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDE----VKSLLLKYLDCRPQDLPR-EVLTT-NPRRL 330

Query: 308 A----------CKKNRYKVVELLLKYGASIAATTESGLTP-LHVASFMGCMNIAIFLLQA 356
           +             + +K V    K    I ++    L P  +   F      ++F    
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCD-KLTTIIESSLNV-LEPAEYRKMFDRL---SVF---- 381

Query: 357 GAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSA 416
              P +A +    P         T ++ ++  +              + V ++L ++S  
Sbjct: 382 ---PPSAHI----P---------TILLSLIWFDV--------IKSDVMVVVNKLHKYS-- 415

Query: 417 SQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARA-REDQTPLHVASRLGNGDIA 475
                          L  +  +   + I       ++ +   E++  LH  S + + +I 
Sbjct: 416 ---------------LVEKQPKESTISI---PSIYLELKVKLENEYALH-RSIVDHYNIP 456

Query: 476 SLLLQHGASVDAPTKDGYTALHIS---AKEGQDEVASILTES-------GASITATTKKG 525
                       P  D Y   HI          E  ++              I   +   
Sbjct: 457 KTFDSDDLI--PPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW 514

Query: 526 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLH----L 581
                +     ++K  +  +  + P   +  V +IL              F P      +
Sbjct: 515 NASGSILNTLQQLKFYKPYICDNDPKYER-LVNAILD-------------FLPKIEENLI 560

Query: 582 AAKYGRMKIAQMLLQKD 598
            +KY    + ++ L  +
Sbjct: 561 CSKY--TDLLRIALMAE 575

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 7e-06
 Identities = 104/739 (14%), Positives = 199/739 (26%), Gaps = 259/739 (35%)

Query: 199 HM---ASQGDHEAATRVLIYHGAGVDEITV----DYLTALHVASHCGHV----------- 240
           HM     +  ++    + ++  A VD        D   ++       H+           
Sbjct: 6   HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTL 65

Query: 241 RVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALN 300
           R+  TLL ++ +   + +          + N YK       ++   +   K +    ++ 
Sbjct: 66  RLFWTLLSKQEEMVQKFVEE------VLRIN-YK-------FLMSPI---KTEQRQPSMM 108

Query: 301 GFTPLHIACKKNRYKVVELLLKYGASIA---ATTESGLTPLHVASF-----MG-----CM 347
             T ++I  +   Y   ++  KY  S           L  L  A       +       +
Sbjct: 109 --TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV 166

Query: 348 NIAIFLLQAGAAPDTATVRGETP-----LHLAARANQTDIVRIL--LRNGASVDARARED 400
                   A     +  V+ +       L+L    +   ++ +L  L      +  +R D
Sbjct: 167 --------ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218

Query: 401 QT---PLHVAS---RLRRFSSASQSA-----LTRVRGETPLHLAARANQTDIVRILL--R 447
            +    L + S    LRR   +         L  V+        A        +ILL  R
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ--NAKAWNAFNLS---CKILLTTR 273

Query: 448 NGASVDARAREDQTPL---HVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQ 504
                D  +    T +   H +  L   ++ SLLL+               L    ++  
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK--------------YLDCRPQDLP 319

Query: 505 DEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG-------KV 557
            EV +                  P  L+     + IA+ +  +D              K+
Sbjct: 320 REVLTTN----------------PRRLS-----I-IAESI--RDGLATWDNWKHVNCDKL 355

Query: 558 ASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHV--- 614
            +I+    +S+         P      + R+ +        A +         P  +   
Sbjct: 356 TTII---ESSLNV-----LEPAEYRKMFDRLSV----FPPSAHI---------PTILLSL 394

Query: 615 ----ASHYDHQNVA-----LLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
                   D   V        L+++        K     +          I    LE   
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQP------KESTISIP--------SI---YLELKV 437

Query: 666 KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATI 725
           K   E       LH             +++H         + L P +L    D+      
Sbjct: 438 KLENEYA-----LH-----------RSIVDHYNIPKTFDSDDLIPPYL----DQY----- 472

Query: 726 TMFNGAEIDPVTKAGFTPLHIASHFGQLNMVR--------YL----VEN-----GANVNA 768
             ++               HI  H   +            +L    +E          NA
Sbjct: 473 -FYS---------------HIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA 516

Query: 769 TTNL-----------GYTPLHQASQQGRV-LIIDLLLGAGAQPNATTNLFCCA-TILVKN 815
           + ++            Y   +    +  V  I+D L      P    NL C   T L++ 
Sbjct: 517 SGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFL------PKIEENLICSKYTDLLRI 570

Query: 816 GAEIDPVTKLSDEHEKSID 834
            A +     + +E  K + 
Sbjct: 571 -ALMAEDEAIFEEAHKQVQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.7 bits (115), Expect = 8e-06
 Identities = 70/472 (14%), Positives = 131/472 (27%), Gaps = 147/472 (31%)

Query: 4   GHDRVVAVLLENDTKGKVKLPALHIAAKKDDCK----AAALLLEVSFSNTKLEVSLSNTK 59
            +      +LE        L  L      +       ++ + L +     +L   L +  
Sbjct: 190 KNCNSPETVLEM-------LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242

Query: 60  LEVSL------SNTK-FEA----------TGQEEVAKILVDNGATINVQSLN----GFTP 98
            E  L       N K + A          T  ++V   L  + AT    SL+      TP
Sbjct: 243 YENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFL--SAATTTHISLDHHSMTLTP 300

Query: 99  LYMAAQENHDGVVRYLLSKGGNQTLATE-HNITPLHVACKWGKVAMVELLISKGANIEAK 157
                 E    +++YL  +   Q L  E     P  ++           +I+        
Sbjct: 301 -----DEVKSLLLKYLDCR--PQDLPREVLTTNPRRLS-----------IIA------ES 336

Query: 158 TRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMAS--------QGDHEAA 209
            RDGL      A    DN   +  +K   +   + N L P                    
Sbjct: 337 IRDGL------ATW--DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIP 388

Query: 210 TRVL-IYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIAC 268
           T +L +     +    +  +  LH            +L++++   +  ++     L +  
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLH----------KYSLVEKQPKESTISIPSIY-LELKV 437

Query: 269 KKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPL--------HIA---CKKNRYKVV 317
           K     + H       ++++D    P     +   P         HI          + +
Sbjct: 438 KLENEYALH-------RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERM 490

Query: 318 ELL----LKYG--------ASIAATTESGLTPL-------------HVASFMGCMN-IAI 351
            L     L +          S A      +                +   +   +N I  
Sbjct: 491 TLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILD 550

Query: 352 FLLQAGAAPDTATVRGETPLHLAARANQTDIVRILL--RNGASVDARAREDQ 401
           FL +            E  L     +  TD++RI L   + A  +   ++ Q
Sbjct: 551 FLPKI-----------EENLI---CSKYTDLLRIALMAEDEAIFEEAHKQVQ 588

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	838
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
4gpm_A	169	Engineered protein OR264; de novo protein, structu	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	100.0
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	100.0
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	100.0
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	100.0
2rfa_A	232	Transient receptor potential cation channel subfa	100.0
3hra_A	201	Ankyrin repeat family protein; structural protein;	100.0
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	100.0
2rfa_A	232	Transient receptor potential cation channel subfa	100.0
2pnn_A	273	Transient receptor potential cation channel subfa	100.0
4gpm_A	169	Engineered protein OR264; de novo protein, structu	100.0
2etb_A	256	Transient receptor potential cation channel subfam	100.0
3hra_A	201	Ankyrin repeat family protein; structural protein;	100.0
2pnn_A	273	Transient receptor potential cation channel subfa	99.97
2etb_A	256	Transient receptor potential cation channel subfam	99.97
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.97
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.97
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.97
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.97
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.97
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.97
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.97
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.96
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.96
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.96
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.96
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.96
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.96
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.96
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.96
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.96
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.96
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.96
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.95
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.95
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.95
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.95
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.95
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.95
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.95
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.94
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.94
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.94
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.94
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.93
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.93
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.93
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.92
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.92
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.92
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.91
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.91
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.9
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.9
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.89
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.88
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.88
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.88
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.87
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.87
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.87
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.86
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.86
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.86
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.85
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.85
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.85
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.84
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.83
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.83
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.82
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.82
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.81
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.81
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.8
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.71
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.7

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=2.3e-61  Score=521.15  Aligned_cols=397  Identities=43%  Similarity=0.673  Sum_probs=298.5

Q ss_pred             CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCccccccCCCCH
Q psy3308         324 GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTP  403 (838)
Q Consensus       324 ~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~  403 (838)
                      |++++..+..|.|||+.|+..|+.++|++|++.|++++..+..+.|||++|+..|+.+++++|+++|+            
T Consensus         4 g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~------------   71 (437)
T 1n11_A            4 GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKA------------   71 (437)
T ss_dssp             -----------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTC------------
T ss_pred             CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC------------
Confidence            44455555555555555555555555555555555555555555555555555555555555555544            


Q ss_pred             HHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy3308         404 LHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGA  483 (838)
Q Consensus       404 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~  483 (838)
                                                                     +++.++..+.|||+.|+..|+.+++++|+++|+
T Consensus        72 -----------------------------------------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga  104 (437)
T 1n11_A           72 -----------------------------------------------KVNAKAKDDQTPLHCAARIGHTNMVKLLLENNA  104 (437)
T ss_dssp             -----------------------------------------------CSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred             -----------------------------------------------CCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCC
Confidence                                                           444444555555555555555555555555555


Q ss_pred             CCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhh
Q psy3308         484 SVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTE  563 (838)
Q Consensus       484 ~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~  563 (838)
                      +++..+..|.|||+.|+..|+.+++++|++.+.+.+..+..|.|||++|+..|+.+++++|++.+..             
T Consensus       105 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------------  171 (437)
T 1n11_A          105 NPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH-------------  171 (437)
T ss_dssp             CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred             CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-------------
Confidence            5555555555555555555555555555555555555555566666666666666666666654432             


Q ss_pred             cCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCh
Q psy3308         564 SGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYT  643 (838)
Q Consensus       564 ~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t  643 (838)
                          ++..+..|.|||+.|+..++.+++++|+++|.+++..+..|.|||++|+..++.+++++|++.|++++..+..|.|
T Consensus       172 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t  247 (437)
T 1n11_A          172 ----PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVT  247 (437)
T ss_dssp             ----TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred             ----CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence                2344556677777788888888888888888888888888999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHH
Q psy3308         644 PLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVA  723 (838)
Q Consensus       644 ~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~  723 (838)
                      |||.|+..|+.+++++|++.|++++..+..|.|||++|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++
T Consensus       248 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v  327 (437)
T 1n11_A          248 PLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLV  327 (437)
T ss_dssp             HHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHH
T ss_pred             HHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCC
Q psy3308         724 TITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG  796 (838)
Q Consensus       724 ~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g  796 (838)
                      ++|+++|++++.++..|+||||+|+..|+.++|++|+++|++++..|.+|.|||++|++.|+.+++++|....
T Consensus       328 ~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~  400 (437)
T 1n11_A          328 KFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT  400 (437)
T ss_dssp             HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred             HHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999998643

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=2.1e-61  Score=521.43  Aligned_cols=397  Identities=38%  Similarity=0.592  Sum_probs=313.2

Q ss_pred             HCCCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCC
Q psy3308          83 DNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGL  162 (838)
Q Consensus        83 ~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~  162 (838)
                      +.|++++..+..|+||||+||..|++++|++|+++|++++..+..|.||||+||..|+.++|++|+++|++++..+..|.
T Consensus         2 ~~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~   81 (437)
T 1n11_A            2 SPGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQ   81 (437)
T ss_dssp             -------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSC
T ss_pred             CCCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Confidence            35788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHH
Q psy3308         163 TPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRV  242 (838)
Q Consensus       163 tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~i  242 (838)
                      |||++|+..|+.++|++|+++|++++..+..|.|||++|+..|+.+++++|++++.+.+..+..+.|||++|+..|+.++
T Consensus        82 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~  161 (437)
T 1n11_A           82 TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRV  161 (437)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred             CHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHH
Confidence            99999999999999999999999998889999999999999999999999999998888888889999999999999999


Q ss_pred             HHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy3308         243 AKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLK  322 (838)
Q Consensus       243 v~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~  322 (838)
                      +++|+++|++++..+..+.|||+.|+..+        +.+++++|+++|.+++..+..|.|||+.|+..|+.+++++|++
T Consensus       162 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--------~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~  233 (437)
T 1n11_A          162 AELLLERDAHPNAAGKNGLTPLHVAVHHN--------NLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQ  233 (437)
T ss_dssp             HHHHHHTTCCTTCCCSSCCCHHHHHHHTT--------CHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCCCCCCCHHHHHHHcC--------CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            99999999888888777888888877776        5667777777777777777777777777777777777777777


Q ss_pred             CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCccccccCCCC
Q psy3308         323 YGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQT  402 (838)
Q Consensus       323 ~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~  402 (838)
                      +|++++..+..|.|||+.|+..|+.+++++|++.+++++..+..|.|||++|+..|+.+++++|+++|++++..+..   
T Consensus       234 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~---  310 (437)
T 1n11_A          234 YGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRM---  310 (437)
T ss_dssp             TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSS---
T ss_pred             cCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCC---
Confidence            77777777777777777777777777777777777777777777777777777777777777777777766655544   


Q ss_pred             HHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy3308         403 PLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG  482 (838)
Q Consensus       403 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~  482 (838)
                                             |.|||+.|+..|+.+++++|+++|++++.++..|.|||++|+..|+.+++++|+++|
T Consensus       311 -----------------------g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g  367 (437)
T 1n11_A          311 -----------------------GYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG  367 (437)
T ss_dssp             -----------------------CCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             -----------------------CCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCc
Confidence                                   344555666666666666666666666666666666666666666666666666666


Q ss_pred             CCCCCCCCCCChHHHHHHHhCcHHHHHHHHH
Q psy3308         483 ASVDAPTKDGYTALHISAKEGQDEVASILTE  513 (838)
Q Consensus       483 ~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~  513 (838)
                      ++++..+..|.||++.|...|+.+++++|..
T Consensus       368 a~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~  398 (437)
T 1n11_A          368 ASPNEVSSDGTTPLAIAKRLGYISVTDVLKV  398 (437)
T ss_dssp             CCSCCCCSSSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence            6666666666666666666666666666654

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=1.6e-44  Score=374.55  Aligned_cols=288  Identities=26%  Similarity=0.373  Sum_probs=215.4

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC-CChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCH
Q psy3308         460 QTPLHVASRLGNGDIASLLLQHGASVDAPTKD-GYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRM  538 (838)
Q Consensus       460 ~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~-~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~  538 (838)
                      .|+|+.|++.|+.++|++|+++|+++|..+.. |.||||+|+..|+.+++++|+++|++++.++..+             
T Consensus        26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~-------------   92 (337)
T 4g8k_A           26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNG-------------   92 (337)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC-------------
T ss_pred             ChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCC-------------
Confidence            44555555555555555555555555544432 4555555555555555555555555555444444             


Q ss_pred             HHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy3308         539 KIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY  618 (838)
Q Consensus       539 ~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~  618 (838)
                                                           .++++.++..+...++..+++.+.+++..+..|.||+++|+..
T Consensus        93 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~  135 (337)
T 4g8k_A           93 -------------------------------------ATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY  135 (337)
T ss_dssp             -------------------------------------CCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHT
T ss_pred             -------------------------------------CchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHc
Confidence                                                 4555555555555555555555555555555556666666666


Q ss_pred             CCHHHHHHHHhCCCCCCc----------cCCCCChHHHHHHHcCcHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCc-
Q psy3308         619 DHQNVALLLLDRGASPHA----------VAKNGYTPLHIAAKKNQMDIATTLLE-YNAKPNAESKAGFTPLHLSAQEGH-  686 (838)
Q Consensus       619 ~~~~~v~~Ll~~g~~~~~----------~~~~~~t~L~~A~~~~~~~iv~~Ll~-~~~~~~~~~~~g~t~L~~A~~~g~-  686 (838)
                      ++.+++++|+++|++++.          .+..|.||||.|+..|+.++|++|++ .|++++..+..|.|+++.++..+. 
T Consensus       136 ~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~  215 (337)
T 4g8k_A          136 GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD  215 (337)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT
T ss_pred             CcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc
Confidence            666666666665555543          34568899999999999999999996 699999999999999998876553 


Q ss_pred             ---HHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy3308         687 ---TDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN-GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN  762 (838)
Q Consensus       687 ---~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~-~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~  762 (838)
                         ..++++|+++|++++.++..|.||||+|+..|+.+++++|+.. |++++.+|..|+||||+|+..|+.++|++|+++
T Consensus       216 ~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~  295 (337)
T 4g8k_A          216 SDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR  295 (337)
T ss_dssp             TTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT
T ss_pred             ccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence               5689999999999999999999999999999999999999985 899999999999999999999999999999999


Q ss_pred             CCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCC
Q psy3308         763 GANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT  802 (838)
Q Consensus       763 g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~  802 (838)
                      |+++|..     +||++|+++|+.++|++|+++||++|..
T Consensus       296 GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d~~  330 (337)
T 4g8k_A          296 GASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKEDFH  330 (337)
T ss_dssp             SCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred             CCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence            9999765     5999999999999999999999999874

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=1e-43  Score=368.44  Aligned_cols=294  Identities=31%  Similarity=0.348  Sum_probs=263.8

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHCCCCCCcccc-CCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcC
Q psy3308          94 NGFTPLYMAAQENHDGVVRYLLSKGGNQTLATE-HNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSG  172 (838)
Q Consensus        94 ~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~-~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g  172 (838)
                      .|.|+|+.||++|++++|++|+++|++++..+. .|.||||+||..|+.++|++|+++|++++..+..+.++++.++..+
T Consensus        24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~  103 (337)
T 4g8k_A           24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG  103 (337)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence            457899999999999999999999999887765 4889999999999999999999999999989999999999999999


Q ss_pred             CHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcc----------cCCCccHHHHHHhcCCHHH
Q psy3308         173 HDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEI----------TVDYLTALHVASHCGHVRV  242 (838)
Q Consensus       173 ~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~----------~~~~~~~l~~A~~~g~~~i  242 (838)
                      +.+++..+++.+.+++..+..|.||+++|+..|+.+++++|+++|++++..          +..|.|||++|+..|+.++
T Consensus       104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~  183 (337)
T 4g8k_A          104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEV  183 (337)
T ss_dssp             CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHH
T ss_pred             cchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHH
Confidence            999999999999999888999999999999999999999999998876633          3457899999999999999


Q ss_pred             HHHHHH-CCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy3308         243 AKTLLD-RKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLL  321 (838)
Q Consensus       243 v~~L~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~  321 (838)
                      |++|++ .|++++..+..+.++++.++..+...    ....++++|+++|++++.++..|.||||.|+..|+.+++++|+
T Consensus       184 v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~----~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll  259 (337)
T 4g8k_A          184 LKILLDEMGADVNACDNMGRNALIHALLSSDDS----DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL  259 (337)
T ss_dssp             HHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTT----THHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHhccCCCcCccCCCCCcHHHHHHHHcCcc----cHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHH
Confidence            999996 59999999999999999988776432    2456899999999999999999999999999999999999999


Q ss_pred             hC-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCcccc
Q psy3308         322 KY-GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDAR  396 (838)
Q Consensus       322 ~~-~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~  396 (838)
                      +. |++++..+..|.||||+|+..|+.++|++|+++|++++..     +||++|+..|+.++|++|+++|++++..
T Consensus       260 ~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d~~  330 (337)
T 4g8k_A          260 EQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKEDFH  330 (337)
T ss_dssp             TSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred             HhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence            85 8999999999999999999999999999999999988754     5999999999999999999999999864

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=2e-42  Score=350.88  Aligned_cols=263  Identities=27%  Similarity=0.330  Sum_probs=248.4

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCcccc-CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy3308         525 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITAT-TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS  603 (838)
Q Consensus       525 ~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~  603 (838)
                      |.++|+.|+..|+.+++++|++.+.+..                 .. +..|.||||.|+..|+.+++++|+++|++++.
T Consensus         5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~-----------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~   67 (285)
T 1wdy_A            5 DNHLLIKAVQNEDVDLVQQLLEGGANVN-----------------FQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL   67 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHTTCCTT-----------------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             cchHHHHHHHcCCHHHHHHHHHcCCCcc-----------------cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence            5678888888888888888887765432                 23 56789999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCC----------CCC
Q psy3308         604 QGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE----------SKA  673 (838)
Q Consensus       604 ~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~----------~~~  673 (838)
                      .+..|.|||++|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++..          +..
T Consensus        68 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~  147 (285)
T 1wdy_A           68 RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKG  147 (285)
T ss_dssp             CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCC
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccC
Confidence            9999999999999999999999999999999999999999999999999999999999999999887          778


Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHhHHHHhcCC----HHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy3308         674 GFTPLHLSAQEGHTDMSSLLIEH-GATVSHQAKNGLTPLHLCAQEDK----VNVATITMFNGAEIDPVTKAGFTPLHIAS  748 (838)
Q Consensus       674 g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~A~~~g~----~~i~~~L~~~~~~~~~~~~~g~t~l~~A~  748 (838)
                      |.|||++|+..|+.+++++|+++ |++++..+..|.||||+|+..++    .+++++|+++|++++.++..|+||||+|+
T Consensus       148 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~  227 (285)
T 1wdy_A          148 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAV  227 (285)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHH
T ss_pred             CCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence            99999999999999999999998 99999999999999999999999    99999999999999999999999999999


Q ss_pred             HcCCHHHHHHHHH-CCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCC
Q psy3308         749 HFGQLNMVRYLVE-NGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN  804 (838)
Q Consensus       749 ~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~  804 (838)
                      ..|+.+++++|++ .|++++..|..|.|||++|++.|+.+++++|+++|++++.+|.
T Consensus       228 ~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~  284 (285)
T 1wdy_A          228 EKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             HTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             HcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence            9999999999999 7999999999999999999999999999999999999999874

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=6.1e-42  Score=358.93  Aligned_cols=287  Identities=26%  Similarity=0.330  Sum_probs=266.1

Q ss_pred             CCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcH
Q psy3308          85 GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTP  164 (838)
Q Consensus        85 ~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~ta  164 (838)
                      +.+++.+|..|+||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.++|++|+++|++++..+..|.||
T Consensus        48 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~  127 (351)
T 3utm_A           48 NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTP  127 (351)
T ss_dssp             TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred             CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence            67788889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHH
Q psy3308         165 LHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAK  244 (838)
Q Consensus       165 l~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~  244 (838)
                      |++|+..|+.+++++|+++|++++..+..+.+++++|+..+..+.+.+....            .++..++..++.+.++
T Consensus       128 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~  195 (351)
T 3utm_A          128 LHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG------------HSLLQAAREADLAKVK  195 (351)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHH------------HHHHHHHHTTCHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcc------------cHHHHHHHhccHHHHH
Confidence            9999999999999999999999999999999999999999999999887653            5788999999999999


Q ss_pred             HHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy3308         245 TLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYG  324 (838)
Q Consensus       245 ~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~  324 (838)
                      .++..+......+..+.|||+.|+..+..     +..+++++|++.|++++.++..|.||||.|+..|+.+++++|+++|
T Consensus       196 ~~l~~~~~~~~~~~~~~t~L~~A~~~~~~-----~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g  270 (351)
T 3utm_A          196 KTLALEIINFKQPQSHETALHCAVASLHP-----KRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG  270 (351)
T ss_dssp             HHTTTCCTTCCCTTTCCCHHHHHHHCCST-----THHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             HHHHhhcccccCCCCCCCHHHHHHHHhCc-----cHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence            99988766666778899999999998643     2688999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy3308         325 ASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGAS  392 (838)
Q Consensus       325 ~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~  392 (838)
                      ++++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||+++|    ..+++++|.+.+..
T Consensus       271 a~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~  334 (351)
T 3utm_A          271 AKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPM  334 (351)
T ss_dssp             CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC---
T ss_pred             CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999987    67899999987553

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=2.3e-41  Score=354.51  Aligned_cols=322  Identities=24%  Similarity=0.334  Sum_probs=226.3

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCC
Q psy3308         459 DQTPLHVASRLGNGDIASLLLQH-GASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGR  537 (838)
Q Consensus       459 ~~~~l~~a~~~~~~~~v~~L~~~-~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~  537 (838)
                      +.++|+.|+..|+.+.+++|+.. +.+++..+..|.||||.|+..|+.+++++|++.|++++.++..|.|||++|+..|+
T Consensus        24 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~  103 (351)
T 3utm_A           24 KKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGH  103 (351)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred             cchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCC
Confidence            34555556666666555555543 45555555566666666666666666666666666666666666666666666666


Q ss_pred             HHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy3308         538 MKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASH  617 (838)
Q Consensus       538 ~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~  617 (838)
                      .+++++|++++.+                 ++..+..|.|||+.|+..|+.+++++|+++|++++..+..|.+|++.|+.
T Consensus       104 ~~iv~~Ll~~g~~-----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~  166 (351)
T 3utm_A          104 YEVTELLLKHGAC-----------------VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPT  166 (351)
T ss_dssp             HHHHHHHHHTTCC-----------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSS
T ss_pred             HHHHHHHHHCCCC-----------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhh
Confidence            6666666655432                 33445566777777777777888888888888888888888888888887


Q ss_pred             cCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc---CcHHHHHHHH
Q psy3308         618 YDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQE---GHTDMSSLLI  694 (838)
Q Consensus       618 ~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~---g~~~iv~~Ll  694 (838)
                      .+..+.+.+...            ..++..++..++.+.++.++..+......+..|.|||++|+..   +..+++++|+
T Consensus       167 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll  234 (351)
T 3utm_A          167 PELRERLTYEFK------------GHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLL  234 (351)
T ss_dssp             HHHHHHHHHHHH------------HHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHH
T ss_pred             hhhHHHHHhhhc------------ccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHH
Confidence            777777776653            2567778888888888888877665556677788888888888   5578888888


Q ss_pred             hCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCC
Q psy3308         695 EHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGY  774 (838)
Q Consensus       695 ~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~  774 (838)
                      ++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++..|..|+
T Consensus       235 ~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~  314 (351)
T 3utm_A          235 RKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGF  314 (351)
T ss_dssp             HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred             HcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCC
Confidence            88888888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             cHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHHcC
Q psy3308         775 TPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVKNG  816 (838)
Q Consensus       775 t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~~~  816 (838)
                      ||+++|    +.+++++|.+.+..   +...+.+ +..|+++|
T Consensus       315 tal~~a----~~~~~~~l~~~~~~---~~~~~~~~l~~A~~~g  350 (351)
T 3utm_A          315 TAAQMG----NEAVQQILSESTPM---RTSDVDYRLLEASKAG  350 (351)
T ss_dssp             CHHHHS----CHHHHHHHHHC----------------------
T ss_pred             Chhhhh----hHHHHHHHHhcccc---ccCcceeehhhhhccC
Confidence            888887    67788888887542   2344555 66666665

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=4.5e-43  Score=367.12  Aligned_cols=318  Identities=22%  Similarity=0.263  Sum_probs=228.0

Q ss_pred             CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHH
Q psy3308         428 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEV  507 (838)
Q Consensus       428 ~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~  507 (838)
                      .+|..++..|+.+.++.+++...++.    ...+++..+...|+++++++++..     ..+..|.|+||.|+..+. ++
T Consensus        39 ~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~g~t~L~~Aa~~~~-~~  108 (373)
T 2fo1_E           39 HSLLEASYDGYIKRQRNELQHYSLYP----NPQGYGNGNDFLGDFNHTNLQIPT-----EPEPESPIKLHTEAAGSY-AI  108 (373)
T ss_dssp             ----------------------------------------------------------------CCCHHHHHHHSSS-CC
T ss_pred             cccccccCCccccchhhhhhhhcccc----CccccCCCCCcccccccccccccc-----CCCCCCccHHHHHhcCCc-hH
Confidence            34555666677777777666544432    122334455566677777666543     345566777777776443 56


Q ss_pred             HHHHHHCCCCCcccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcC
Q psy3308         508 ASILTESGASITATT-KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYG  586 (838)
Q Consensus       508 v~~L~~~~~~~~~~~-~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~  586 (838)
                      +++|+.  .+++..+ ..|.|||++|+..|+.+++++|+.                                        
T Consensus       109 ~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~----------------------------------------  146 (373)
T 2fo1_E          109 TEPITR--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIV----------------------------------------  146 (373)
T ss_dssp             CSCCST--TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHH----------------------------------------
T ss_pred             HHHhcc--ccccccCCcCCCCHHHHHHHCCCHHHHHHHHH----------------------------------------
Confidence            665543  3444455 566667766666666666666652                                        


Q ss_pred             cHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCC--
Q psy3308         587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN--  664 (838)
Q Consensus       587 ~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~--  664 (838)
                        ..++.|++.|+++|.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++  
T Consensus       147 --~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~  224 (373)
T 2fo1_E          147 --HEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKL  224 (373)
T ss_dssp             --HHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHH
T ss_pred             --HHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCcc
Confidence              2345667899999999999999999999999999999999999999999999999999999999999999999988  


Q ss_pred             -CCCCCCCCCCCcHHHHHHHcC---cHHHHHHHHhCCCCCCC--------CCCCCCcHhHHHHhcCCHHHHHHHHhCC-C
Q psy3308         665 -AKPNAESKAGFTPLHLSAQEG---HTDMSSLLIEHGATVSH--------QAKNGLTPLHLCAQEDKVNVATITMFNG-A  731 (838)
Q Consensus       665 -~~~~~~~~~g~t~L~~A~~~g---~~~iv~~Ll~~g~~~~~--------~~~~~~t~l~~A~~~g~~~i~~~L~~~~-~  731 (838)
                       .+++..+..|.|||++|+..+   +.+++++|+++|++++.        .+..|.||||+|+..|+.+++++|++++ +
T Consensus       225 ~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~  304 (373)
T 2fo1_E          225 KGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGS  304 (373)
T ss_dssp             HHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCC
T ss_pred             ccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCC
Confidence             789999999999999999998   89999999999999886        5678999999999999999999999876 9


Q ss_pred             CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCC
Q psy3308         732 EIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP  799 (838)
Q Consensus       732 ~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~  799 (838)
                      +++.+|..|+||||+|+..|+.++|++|+++|++++..|..|.|||++|+.+|+.++|++|+++|++.
T Consensus       305 ~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~  372 (373)
T 2fo1_E          305 NKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPER  372 (373)
T ss_dssp             CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred             CccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999864

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=3.5e-41  Score=341.81  Aligned_cols=267  Identities=31%  Similarity=0.342  Sum_probs=226.4

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHCCCCCCcc-ccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcC
Q psy3308          94 NGFTPLYMAAQENHDGVVRYLLSKGGNQTLA-TEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSG  172 (838)
Q Consensus        94 ~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~-~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g  172 (838)
                      .|.|+|+.|++.|++++|++|+++|.+++.. +..|.||||+|+..|+.++|++|+++|++++..+..|.|||++|+..|
T Consensus         4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   83 (285)
T 1wdy_A            4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG   83 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             ccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence            4678899999999999999999998888877 677889999999999999999999999998888889999999999999


Q ss_pred             CHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcc----------cCCCccHHHHHHhcCCHHH
Q psy3308         173 HDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEI----------TVDYLTALHVASHCGHVRV  242 (838)
Q Consensus       173 ~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~----------~~~~~~~l~~A~~~g~~~i  242 (838)
                      +.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++..          +..+.|||+.|+..|+.++
T Consensus        84 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~  163 (285)
T 1wdy_A           84 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEV  163 (285)
T ss_dssp             CHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHH
T ss_pred             CHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHH
Confidence            999999999999988888888999999999999999999999998887765          5667889999999999999


Q ss_pred             HHHHHHC-CCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy3308         243 AKTLLDR-KADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLL  321 (838)
Q Consensus       243 v~~L~~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~  321 (838)
                      +++|++. |++++..+..|.+||+.|+..+...    ...+++++|++.|++++.++..|.||||.|+..|+.+++++|+
T Consensus       164 v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~----~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  239 (285)
T 1wdy_A          164 LKILLDEMGADVNACDNMGRNALIHALLSSDDS----DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL  239 (285)
T ss_dssp             HHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTT----THHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHHhcCCCCCccCCCCCCHHHHHHHccccc----hHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence            9999987 8888888888888888888876422    1367888888888888888888888888888888888888888


Q ss_pred             h-CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy3308         322 K-YGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTAT  364 (838)
Q Consensus       322 ~-~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~  364 (838)
                      + .|++++..+..|.|||++|+..|+.+++++|+++|++++..|
T Consensus       240 ~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d  283 (285)
T 1wdy_A          240 EQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             HSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             hccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence            7 778888788888888888888888888888888888777665

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.5e-40  Score=333.96  Aligned_cols=269  Identities=23%  Similarity=0.262  Sum_probs=212.8

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy3308         523 KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD  602 (838)
Q Consensus       523 ~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~  602 (838)
                      ..+.|++|+|+..|+.+.+..++..++.......    +  ....++..+..|.||||.|+..|+.+++++|++.|++++
T Consensus        13 ~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~----l--~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~   86 (285)
T 3d9h_A           13 GLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIR----L--LSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVN   86 (285)
T ss_dssp             -----------------------------CCSEE----C--CCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred             hHHHHHHHHHhhcCCCCCcccCCCCccccccchh----h--hhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence            4567788888888876666655444322110000    0  011245678889999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy3308         603 SQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSA  682 (838)
Q Consensus       603 ~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~  682 (838)
                      .++..|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++..+ .|.|||++|+
T Consensus        87 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~  165 (285)
T 3d9h_A           87 IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAA  165 (285)
T ss_dssp             EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHH
T ss_pred             CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999988654 4899999999


Q ss_pred             HcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy3308         683 QEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN  762 (838)
Q Consensus       683 ~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~  762 (838)
                      ..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|+++
T Consensus       166 ~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~  244 (285)
T 3d9h_A          166 RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDF  244 (285)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred             HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence            99999999999999999999999999999999999999999999999999984 88899999999999999999999999


Q ss_pred             CCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhC-CCCCCC
Q psy3308         763 GANVNATTNLGYTPLHQASQQGRVLIIDLLLGA-GAQPNA  801 (838)
Q Consensus       763 g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~-ga~~~~  801 (838)
                      |++++.+|..|+|||++|+  ++.+++++|+++ |+++..
T Consensus       245 gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~~  282 (285)
T 3d9h_A          245 GADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASLPK  282 (285)
T ss_dssp             TCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC------
T ss_pred             CCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCCC
Confidence            9999999999999999999  557899999998 887654

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=1.8e-41  Score=354.93  Aligned_cols=318  Identities=20%  Similarity=0.219  Sum_probs=212.4

Q ss_pred             CcHHhHHHhcCCHHHHHHHHhccccccchhhcccCcchhhhccchhhhhcCcHHHHHHHHHCCCCcccCCCCCCcHHHHH
Q psy3308          23 LPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMA  102 (838)
Q Consensus        23 ~~al~~Aa~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~l~~~~~~~~~~~~~~~t~l~~A  102 (838)
                      ..+|..|+..|+.+.++.+++....          ..+. ......+...|+++++++++..     .++..|.||||.|
T Consensus        38 ~~~l~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~~~~~~~g~~~~~~~~~~~-----~~~~~g~t~L~~A  101 (373)
T 2fo1_E           38 QHSLLEASYDGYIKRQRNELQHYSL----------YPNP-QGYGNGNDFLGDFNHTNLQIPT-----EPEPESPIKLHTE  101 (373)
T ss_dssp             ------------------------------------------------------------------------CCCHHHHH
T ss_pred             ccccccccCCccccchhhhhhhhcc----------ccCc-cccCCCCCcccccccccccccc-----CCCCCCccHHHHH
Confidence            4568888899999999998872111          0011 1112335667999999988764     4678899999999


Q ss_pred             HHcCcHHHHHHHHHCCCCCCccc-cCCCcHHHHHHHcCCHHHHHHHH--------HcCCCCccccCCCCcHHHHHHHcCC
Q psy3308         103 AQENHDGVVRYLLSKGGNQTLAT-EHNITPLHVACKWGKVAMVELLI--------SKGANIEAKTRDGLTPLHCAARSGH  173 (838)
Q Consensus       103 ~~~g~~~~v~~L~~~~~~~~~~~-~~~~~~l~~Aa~~g~~~iv~~L~--------~~~~~~~~~~~~~~tal~~A~~~g~  173 (838)
                      +..| .+++++|+..  +++..+ ..|.||||+||.+|+.++|++|+        +.|++++..+..|.||||+|+..|+
T Consensus       102 a~~~-~~~~~~L~~~--~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~  178 (373)
T 2fo1_E          102 AAGS-YAITEPITRE--SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARR  178 (373)
T ss_dssp             HHSS-SCCCSCCSTT--TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTC
T ss_pred             hcCC-chHHHHhccc--cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcCh
Confidence            9955 4899988754  556777 78999999999999999888886        7899999999999999999999999


Q ss_pred             HHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCC---CCCCcccCCCccHHHHHHhcC---CHHHHHHHH
Q psy3308         174 DNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHG---AGVDEITVDYLTALHVASHCG---HVRVAKTLL  247 (838)
Q Consensus       174 ~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~---~~~~~~~~~~~~~l~~A~~~g---~~~iv~~L~  247 (838)
                      .++|++|++.|++++..+..|.|||++|+..|+.+++++|++++   .+++..+..+.|||++|+..|   +.+++++|+
T Consensus       179 ~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll  258 (373)
T 2fo1_E          179 RRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLV  258 (373)
T ss_dssp             HHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHH
Confidence            99999999999999999999999999999999999999999988   788888999999999999998   899999999


Q ss_pred             HCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC
Q psy3308         248 DRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYG-AS  326 (838)
Q Consensus       248 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~-~~  326 (838)
                      +.|++++.....                                 ..+..+..|.||||.|+..|+.++|++|++++ ++
T Consensus       259 ~~g~~~~~~~~~---------------------------------~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~  305 (373)
T 2fo1_E          259 EKGAKVDYDGAA---------------------------------RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN  305 (373)
T ss_dssp             HHTCCSSCCSGG---------------------------------GTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC
T ss_pred             HCCCCccccccc---------------------------------ccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC
Confidence            999988864210                                 01223455666677777667777777776654 66


Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy3308         327 IAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGAS  392 (838)
Q Consensus       327 ~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~  392 (838)
                      ++..+..|.|||++|+..|+.++|++|+++|++++..+..|.|||++|+..|+.+++++|++++++
T Consensus       306 ~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~  371 (373)
T 2fo1_E          306 KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE  371 (373)
T ss_dssp             TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred             ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence            666666666777777777777777777777766666666667777777777777777777666654

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.7e-40  Score=333.59  Aligned_cols=261  Identities=23%  Similarity=0.248  Sum_probs=213.9

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCC-----------CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCC
Q psy3308         572 TKKGFTPLHLAAKYGRMKIAQMLLQKD-----------APVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKN  640 (838)
Q Consensus       572 ~~~~~~~l~~a~~~~~~~~v~~Ll~~~-----------~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~  640 (838)
                      ...+.|++|+|+..|+.+.+..++..+           ..++.++..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus        12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~   91 (285)
T 3d9h_A           12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITAD   91 (285)
T ss_dssp             ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTT
T ss_pred             chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence            346789999999999987777665442           235667889999999999999999999999999999999999


Q ss_pred             CChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCH
Q psy3308         641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKV  720 (838)
Q Consensus       641 ~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~  720 (838)
                      |.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++..+ .|.||||+|+..|+.
T Consensus        92 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~  170 (285)
T 3d9h_A           92 HVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHV  170 (285)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCH
T ss_pred             CCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCH
Confidence            9999999999999999999999999999999999999999999999999999999999998654 599999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCC
Q psy3308         721 NVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN  800 (838)
Q Consensus       721 ~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~  800 (838)
                      +++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++. +..|.||||+|++.|+.+++++|+++|++++
T Consensus       171 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~  249 (285)
T 3d9h_A          171 ECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQ  249 (285)
T ss_dssp             HHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred             HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence            999999999999999999999999999999999999999999999995 8889999999999999999999999999999


Q ss_pred             CCCCccch-HHHHHHcCCccCcccccccccccccCCCC
Q psy3308         801 ATTNLFCC-ATILVKNGAEIDPVTKLSDEHEKSIDLPN  837 (838)
Q Consensus       801 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  837 (838)
                      .+|..|.| +++|+.+   .+.++.|++...-+++.|.
T Consensus       250 ~~d~~g~t~l~~A~~~---~~~~~~Ll~~~~a~l~~~~  284 (285)
T 3d9h_A          250 AKNAEGKRPVELVPPE---SPLAQLFLEREGASLPKPK  284 (285)
T ss_dssp             CCCTTSCCGGGGSCTT---SHHHHHHHHHC--------
T ss_pred             CcCCCCCCHHHHhcCc---cHHHHHHHHhhccCCCCCC
Confidence            99999999 9999933   4778888887777887774

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=9.4e-40  Score=322.81  Aligned_cols=231  Identities=27%  Similarity=0.347  Sum_probs=175.6

Q ss_pred             CccccCCCCCcHHHHHHHcC-------------cHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy3308         567 SITATTKKGFTPLHLAAKYG-------------RMKIAQMLLQKDAPVDS-QGKNGVTPLHVASHYDHQNVALLLLDRGA  632 (838)
Q Consensus       567 ~~~~~~~~~~~~l~~a~~~~-------------~~~~v~~Ll~~~~~~~~-~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~  632 (838)
                      +++.++..|.||||.|+..|             +.+++++|++.|++++. .+..|.||||+|+..|+.+++++|+++|+
T Consensus         2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~   81 (253)
T 1yyh_A            2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA   81 (253)
T ss_dssp             --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence            56778889999999999977             88999999999988865 47889999999999999999999999999


Q ss_pred             CCCccCCCCChHHHHHHHcCcHHHHHHHHhCCC-CCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHh
Q psy3308         633 SPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNA-KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPL  711 (838)
Q Consensus       633 ~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~-~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l  711 (838)
                      +++..+..|.||||+|+..|+.+++++|++++. +++..+..|.|||++|+..|+.+++++|+++|++++.++..|.|||
T Consensus        82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L  161 (253)
T 1yyh_A           82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL  161 (253)
T ss_dssp             CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred             CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence            999999899999999999999999999999886 8888888999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHH
Q psy3308         712 HLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDL  791 (838)
Q Consensus       712 ~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~  791 (838)
                      |+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|++.|+.+|+++
T Consensus       162 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~  241 (253)
T 1yyh_A          162 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRL  241 (253)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCC
Q psy3308         792 LLGAGA  797 (838)
Q Consensus       792 Ll~~ga  797 (838)
                      |.+...
T Consensus       242 l~~~~~  247 (253)
T 1yyh_A          242 LDLEHH  247 (253)
T ss_dssp             HHC---
T ss_pred             HHHHhh
Confidence            987643

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=1.7e-39  Score=320.96  Aligned_cols=232  Identities=29%  Similarity=0.356  Sum_probs=185.1

Q ss_pred             CCCCCCCCCCcHHHHHHHcC-------------CHHHHHHHHhCCCCCCcc-CCCCChHHHHHHHcCcHHHHHHHHhCCC
Q psy3308         600 PVDSQGKNGVTPLHVASHYD-------------HQNVALLLLDRGASPHAV-AKNGYTPLHIAAKKNQMDIATTLLEYNA  665 (838)
Q Consensus       600 ~~~~~~~~~~~~l~~A~~~~-------------~~~~v~~Ll~~g~~~~~~-~~~~~t~L~~A~~~~~~~iv~~Ll~~~~  665 (838)
                      ++|.+|..|.||||+|+..|             +.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|+
T Consensus         2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~   81 (253)
T 1yyh_A            2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA   81 (253)
T ss_dssp             --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence            67889999999999999977             899999999999998654 7899999999999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCC-CCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHH
Q psy3308         666 KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA-TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPL  744 (838)
Q Consensus       666 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l  744 (838)
                      +++..+..|.|||++|+..|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+++|++++.++..|+|||
T Consensus        82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L  161 (253)
T 1yyh_A           82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL  161 (253)
T ss_dssp             CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred             CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence            999999999999999999999999999999987 8999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHHcCCccCccc
Q psy3308         745 HIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVKNGAEIDPVT  823 (838)
Q Consensus       745 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~~~~~~~~~~  823 (838)
                      |+|+..|+.+++++|+++|++++..|..|.||||+|++.|+.+++++|+++|++++.+|..|.| +++|+++|+ .++++
T Consensus       162 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~-~~i~~  240 (253)
T 1yyh_A          162 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH-HDIVR  240 (253)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC-HHHHH
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCC-HHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999 49998


Q ss_pred             ccccccccc
Q psy3308         824 KLSDEHEKS  832 (838)
Q Consensus       824 ~~~~~~~~~  832 (838)
                      .|.++.+.+
T Consensus       241 ~l~~~~~~~  249 (253)
T 1yyh_A          241 LLDLEHHHH  249 (253)
T ss_dssp             HHHC-----
T ss_pred             HHHHHhhhc
Confidence            888776654

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=2.6e-38  Score=310.14  Aligned_cols=229  Identities=27%  Similarity=0.387  Sum_probs=209.6

Q ss_pred             CCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHH
Q psy3308         566 ASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPL  645 (838)
Q Consensus       566 ~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L  645 (838)
                      .+++..+..|.|||+.|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++..+..|.|||
T Consensus         2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L   81 (237)
T 3b7b_A            2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCL   81 (237)
T ss_dssp             CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHH
T ss_pred             CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHH
Confidence            35677788899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCcHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHH
Q psy3308         646 HIAAKKNQMDIATTLLEYN-AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVAT  724 (838)
Q Consensus       646 ~~A~~~~~~~iv~~Ll~~~-~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~  724 (838)
                      |.|+..|+.+++++|++.| .+++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++++
T Consensus        82 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~  161 (237)
T 3b7b_A           82 HLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAE  161 (237)
T ss_dssp             HHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred             HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHH
Confidence            9999999999999999988 788888999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHh
Q psy3308         725 ITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG  794 (838)
Q Consensus       725 ~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~  794 (838)
                      +|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+.+|+...+..|++
T Consensus       162 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~  231 (237)
T 3b7b_A          162 ILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSK  231 (237)
T ss_dssp             HHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred             HHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999998866655554

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=8.1e-39  Score=314.92  Aligned_cols=229  Identities=28%  Similarity=0.388  Sum_probs=208.9

Q ss_pred             cccCCCCCcHHHHHHHcCcHHHHHHHHh----CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChH
Q psy3308         569 TATTKKGFTPLHLAAKYGRMKIAQMLLQ----KDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTP  644 (838)
Q Consensus       569 ~~~~~~~~~~l~~a~~~~~~~~v~~Ll~----~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~  644 (838)
                      +.+|..|.||||.|+..|+.+++++|++    .+.+++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||
T Consensus         3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~   82 (241)
T 1k1a_A            3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTA   82 (241)
T ss_dssp             ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence            4567789999999999999999999997    789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCcHHHHHHHHhCCC----CCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCcHhHHHHhcCC
Q psy3308         645 LHIAAKKNQMDIATTLLEYNA----KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA-KNGLTPLHLCAQEDK  719 (838)
Q Consensus       645 L~~A~~~~~~~iv~~Ll~~~~----~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~t~l~~A~~~g~  719 (838)
                      ||.|+..|+.+++++|++.+.    +++..+..|.|||++|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+
T Consensus        83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~  162 (241)
T 1k1a_A           83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS  162 (241)
T ss_dssp             HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCC
Confidence            999999999999999999887    888889999999999999999999999999999999888 789999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCC
Q psy3308         720 VNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA  797 (838)
Q Consensus       720 ~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga  797 (838)
                      .+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.++++.|.+.++
T Consensus       163 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a  240 (241)
T 1k1a_A          163 LSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA  240 (241)
T ss_dssp             HHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred             HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999998765

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=2.5e-40  Score=347.02  Aligned_cols=234  Identities=24%  Similarity=0.292  Sum_probs=219.2

Q ss_pred             CCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHH
Q psy3308         566 ASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPL  645 (838)
Q Consensus       566 ~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L  645 (838)
                      .+.+..+..|.||||.|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.  ..|.|||
T Consensus        11 ~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L   88 (364)
T 3ljn_A           11 LNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPI   88 (364)
T ss_dssp             -----CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHH
T ss_pred             CCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHH
Confidence            34566778899999999999999999999999999999999999999999999999999999999996664  4789999


Q ss_pred             HHHHHcCcHHHHHHHHhC----CCCCCC-----------------CCCCCCcHHHHHHHcC--cHHHHHHHHhCCCCCCC
Q psy3308         646 HIAAKKNQMDIATTLLEY----NAKPNA-----------------ESKAGFTPLHLSAQEG--HTDMSSLLIEHGATVSH  702 (838)
Q Consensus       646 ~~A~~~~~~~iv~~Ll~~----~~~~~~-----------------~~~~g~t~L~~A~~~g--~~~iv~~Ll~~g~~~~~  702 (838)
                      |.|+..|+.+++++|+++    |.+++.                 .+..|.|||++|+..|  +.++|++|+++|++++.
T Consensus        89 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~  168 (364)
T 3ljn_A           89 HLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA  168 (364)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC
T ss_pred             HHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc
Confidence            999999999999999998    777766                 7888999999999999  99999999999999999


Q ss_pred             CCCCCCcHhHHHHhcCCHHHHHHHHhCCCC-----CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHH
Q psy3308         703 QAKNGLTPLHLCAQEDKVNVATITMFNGAE-----IDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPL  777 (838)
Q Consensus       703 ~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~-----~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l  777 (838)
                      .+..|.||||+|+..|+.+++++|+++|++     ++.++..|+||||+|+..|+.++|++|+++|++++..|..|+|||
T Consensus       169 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL  248 (364)
T 3ljn_A          169 KDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPL  248 (364)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHH
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence            999999999999999999999999999998     999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCcHHHHHHHHhCCCCCCC
Q psy3308         778 HQASQQGRVLIIDLLLGAGAQPNA  801 (838)
Q Consensus       778 ~~A~~~~~~~~v~~Ll~~ga~~~~  801 (838)
                      ++|++.|+.++|++|+++|++++.
T Consensus       249 ~~A~~~g~~~~v~~Ll~~~~~~~~  272 (364)
T 3ljn_A          249 YLSVRAAMVLLTKELLQKTDVFLI  272 (364)
T ss_dssp             HHHHHTCCHHHHHHHHHHSCHHHH
T ss_pred             HHHHHhChHHHHHHHHHcCCchhh
Confidence            999999999999999999988644

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=3.4e-38  Score=307.90  Aligned_cols=226  Identities=25%  Similarity=0.356  Sum_probs=217.4

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcC
Q psy3308         574 KGFTPLHLAAKYGRMKIAQMLLQKDAP-VDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKN  652 (838)
Q Consensus       574 ~~~~~l~~a~~~~~~~~v~~Ll~~~~~-~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~  652 (838)
                      .+.+||+.|+..|+.+++++|++.+.. ++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||||.|+..|
T Consensus         5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   84 (231)
T 3aji_A            5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAG   84 (231)
T ss_dssp             CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT
T ss_pred             cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcC
Confidence            467999999999999999999987644 6778899999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCC
Q psy3308         653 QMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAE  732 (838)
Q Consensus       653 ~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~  732 (838)
                      +.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++
T Consensus        85 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  164 (231)
T 3aji_A           85 XDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS  164 (231)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCC
Q psy3308         733 IDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP  799 (838)
Q Consensus       733 ~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~  799 (838)
                      ++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|++.++.+++++|.++|+++
T Consensus       165 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~i  231 (231)
T 3aji_A          165 TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEASM  231 (231)
T ss_dssp             SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHCC
T ss_pred             ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccccC
Confidence            9999999999999999999999999999999999999999999999999999999999999998763

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=3e-39  Score=338.79  Aligned_cols=232  Identities=22%  Similarity=0.220  Sum_probs=166.6

Q ss_pred             CCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcH
Q psy3308          85 GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTP  164 (838)
Q Consensus        85 ~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~ta  164 (838)
                      +.+++..|..|+||||+||..|+.++|++|+++|++++..+..|.||||+||..|+.++|++|+++|+++  .+..|.||
T Consensus        10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~g~t~   87 (364)
T 3ljn_A           10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH--SLWHGQKP   87 (364)
T ss_dssp             ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC--CCBTTBCH
T ss_pred             CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc--cccCCCCH
Confidence            3456778889999999999999999999999999999999999999999999999999999999999965  44578999


Q ss_pred             HHHHHHcCCHHHHHHHHHc----CCCccC-----------------CCCCCccHHHHHHhCC--cHHHHHHHHhCCCCCC
Q psy3308         165 LHCAARSGHDNVIDILIEK----GAALYS-----------------KTKNGLAPLHMASQGD--HEAATRVLIYHGAGVD  221 (838)
Q Consensus       165 l~~A~~~g~~~iv~~L~~~----~~~~~~-----------------~~~~~~~~l~~A~~~g--~~~~v~~L~~~~~~~~  221 (838)
                      |++|+..|+.++|++|++.    +.+.+.                 .+..|.|||++|+..|  +.+++++|+++|++++
T Consensus        88 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~  167 (364)
T 3ljn_A           88 IHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT  167 (364)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT
T ss_pred             HHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc
Confidence            9999999999999999998    666544                 4556666777777766  6677777776666666


Q ss_pred             cccCCCccHHHHHHhcCCHHHHHHHHHCCCC-----ccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCC
Q psy3308         222 EITVDYLTALHVASHCGHVRVAKTLLDRKAD-----PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNA  296 (838)
Q Consensus       222 ~~~~~~~~~l~~A~~~g~~~iv~~L~~~~~~-----~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~  296 (838)
                      ..+..+.|||++|+..|+.+++++|++.|++     ++..+..|.||||+|+..|        +.+++++|+++|++++.
T Consensus       168 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g--------~~~~v~~Ll~~gad~~~  239 (364)
T 3ljn_A          168 AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILIN--------WEDVAMRFVEMGIDVNM  239 (364)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTT--------CHHHHHHHHTTTCCTTC
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcC--------CHHHHHHHHHcCCCCCC
Confidence            6666666677777777777666666666665     5555555555555555544        44455555555555555


Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy3308         297 RALNGFTPLHIACKKNRYKVVELLLKYGAS  326 (838)
Q Consensus       297 ~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~  326 (838)
                      .+..|.|||+.|+..|+.+++++|+++|++
T Consensus       240 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~  269 (364)
T 3ljn_A          240 EDNEHTVPLYLSVRAAMVLLTKELLQKTDV  269 (364)
T ss_dssp             CCTTSCCHHHHHHHTCCHHHHHHHHHHSCH
T ss_pred             CCCCCCCHHHHHHHhChHHHHHHHHHcCCc
Confidence            555555555555555555555555555443

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=5.2e-38  Score=307.97  Aligned_cols=228  Identities=22%  Similarity=0.326  Sum_probs=217.5

Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHH
Q psy3308         599 APVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPL  678 (838)
Q Consensus       599 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L  678 (838)
                      .+++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++..+..|.|||
T Consensus         2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L   81 (237)
T 3b7b_A            2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCL   81 (237)
T ss_dssp             CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHH
T ss_pred             CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHH
Confidence            46778899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCcHHHHHHHHhCC-CCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q psy3308         679 HLSAQEGHTDMSSLLIEHG-ATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVR  757 (838)
Q Consensus       679 ~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~  757 (838)
                      ++|+..|+.+++++|+++| .+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.++++
T Consensus        82 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~  161 (237)
T 3b7b_A           82 HLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAE  161 (237)
T ss_dssp             HHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred             HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHH
Confidence            9999999999999999998 899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHHcCCccCccccccc
Q psy3308         758 YLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVKNGAEIDPVTKLSD  827 (838)
Q Consensus       758 ~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  827 (838)
                      +|+++|++++..|..|.||||+|++.|+.+++++|+++|++++.+|..|.| +++|+.+++. ..+..+.+
T Consensus       162 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~-~~~~~l~~  231 (237)
T 3b7b_A          162 ILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQV-WSALQMSK  231 (237)
T ss_dssp             HHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHH-HHHHHHHH
T ss_pred             HHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHH-HHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999 9999998874 44444433

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.9e-39  Score=318.69  Aligned_cols=230  Identities=22%  Similarity=0.304  Sum_probs=181.9

Q ss_pred             cCCCCCcHHHHHHHcCcHHHHHHHHhCCCC--------CCCCCCCCCcHHHHHHHcCCH-HHHHHHHhCCCCCCccCCCC
Q psy3308         571 TTKKGFTPLHLAAKYGRMKIAQMLLQKDAP--------VDSQGKNGVTPLHVASHYDHQ-NVALLLLDRGASPHAVAKNG  641 (838)
Q Consensus       571 ~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~--------~~~~~~~~~~~l~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~~  641 (838)
                      +|..+.++|+.|+..|+.++|++|++.+.+        ++..+..+.+||+.|+..+.. .++++|++.|++++..+..|
T Consensus         7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G   86 (269)
T 4b93_B            7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDG   86 (269)
T ss_dssp             CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTS
T ss_pred             cCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCC
Confidence            455567899999999999999999998875        455677889999999988765 58899999999999999999


Q ss_pred             ChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHH
Q psy3308         642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVN  721 (838)
Q Consensus       642 ~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~  721 (838)
                      +||||+|+..|+.++|++|++.|++++..+..|.||++.|+..++.+++++|+++|++++.++..|.||||+|+..|+.+
T Consensus        87 ~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~  166 (269)
T 4b93_B           87 SSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHE  166 (269)
T ss_dssp             CCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGG
T ss_pred             CCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCc-HHHHHHHHhCCCCCC
Q psy3308         722 VATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGR-VLIIDLLLGAGAQPN  800 (838)
Q Consensus       722 i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~-~~~v~~Ll~~ga~~~  800 (838)
                      ++++|+++|+++|.++..|+||||+|+..|+.++|++|+++|++++.+|..|+|||++|+++++ .+++++|...++..+
T Consensus       167 ~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~~~  246 (269)
T 4b93_B          167 LVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVASLD  246 (269)
T ss_dssp             GHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC---------
T ss_pred             HHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchhhh
Confidence            9999999999999999999999999999999999999999999999999999999999999887 455666666665544

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=1.3e-37  Score=306.30  Aligned_cols=226  Identities=26%  Similarity=0.353  Sum_probs=211.4

Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHh----CCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcH
Q psy3308         602 DSQGKNGVTPLHVASHYDHQNVALLLLD----RGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTP  677 (838)
Q Consensus       602 ~~~~~~~~~~l~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~  677 (838)
                      +.+|..|.||||+|+..|+.+++++|++    .|.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||
T Consensus         3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~   82 (241)
T 1k1a_A            3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTA   82 (241)
T ss_dssp             ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence            4578899999999999999999999997    799999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCcHHHHHHHHhCCC----CCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCC
Q psy3308         678 LHLSAQEGHTDMSSLLIEHGA----TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVT-KAGFTPLHIASHFGQ  752 (838)
Q Consensus       678 L~~A~~~g~~~iv~~Ll~~g~----~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~-~~g~t~l~~A~~~g~  752 (838)
                      |++|+..|+.+++++|++.++    +++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+
T Consensus        83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~  162 (241)
T 1k1a_A           83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS  162 (241)
T ss_dssp             HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCC
Confidence            999999999999999999987    888899999999999999999999999999999999988 889999999999999


Q ss_pred             HHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHHcCCccCcccccccc
Q psy3308         753 LNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVKNGAEIDPVTKLSDE  828 (838)
Q Consensus       753 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  828 (838)
                      .+++++|+++|++++..|..|.||||+|++.|+.+++++|+++|++++.+|..|.| +++|+..|+ .++++.|.+.
T Consensus       163 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~-~~i~~~l~~~  238 (241)
T 1k1a_A          163 LSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRV-IDILRGKATR  238 (241)
T ss_dssp             HHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHH-HHHHTC----
T ss_pred             HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCc-HHHHhhhccC
Confidence            99999999999999999999999999999999999999999999999999999999 999999888 5888776653

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=4.3e-37  Score=302.71  Aligned_cols=234  Identities=27%  Similarity=0.366  Sum_probs=218.2

Q ss_pred             cccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCC-CChHHHH
Q psy3308         569 TATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKN-GYTPLHI  647 (838)
Q Consensus       569 ~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-~~t~L~~  647 (838)
                      +..+..+.++|+.|+..|+.+++++|++.|++++..+..|.|||++|+..|+.+++++|+++|++++..... |.|||+.
T Consensus         3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~   82 (240)
T 3eu9_A            3 THIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHW   82 (240)
T ss_dssp             CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHH
T ss_pred             cccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHH
Confidence            445667889999999999999999999999999999999999999999999999999999999998866544 9999999


Q ss_pred             HHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCC-HHHHHHH
Q psy3308         648 AAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDK-VNVATIT  726 (838)
Q Consensus       648 A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~-~~i~~~L  726 (838)
                      |+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||||.|+..++ .+++++|
T Consensus        83 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L  162 (240)
T 3eu9_A           83 ATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL  162 (240)
T ss_dssp             HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHH
T ss_pred             HHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999997766 7899999


Q ss_pred             HhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCC
Q psy3308         727 MFNGAEIDPVTK-AGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT  802 (838)
Q Consensus       727 ~~~~~~~~~~~~-~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~  802 (838)
                      ++.|++++..+. .|.||||+|+..|+.+++++|+++|++++..|..|.|||++|++.|+.+++++|+++|++....
T Consensus       163 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~  239 (240)
T 3eu9_A          163 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYD  239 (240)
T ss_dssp             HHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC------
T ss_pred             HhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccCcC
Confidence            999999999987 8999999999999999999999999999999999999999999999999999999999877644

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=1.1e-37  Score=315.08  Aligned_cols=249  Identities=22%  Similarity=0.262  Sum_probs=201.6

Q ss_pred             cccCCCCCcHHHHHHHcCcHHHHHHHHhCCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHH
Q psy3308         569 TATTKKGFTPLHLAAKYGRMKIAQMLLQKDAP---VDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPL  645 (838)
Q Consensus       569 ~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~---~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L  645 (838)
                      +..+..|.||||.|+..|+.++|++|++.|++   ++.++..|.||||+|+..|+.+++++|+++|++++..+..|.|||
T Consensus         3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL   82 (282)
T 1oy3_D            3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL   82 (282)
T ss_dssp             CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred             CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence            56788999999999999999999999999888   788999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCCCCC-------------CCCCCcHHHHHHHcCc-HHHHHHHHhCCCCCCCCCCCCCcHh
Q psy3308         646 HIAAKKNQMDIATTLLEYNAKPNAE-------------SKAGFTPLHLSAQEGH-TDMSSLLIEHGATVSHQAKNGLTPL  711 (838)
Q Consensus       646 ~~A~~~~~~~iv~~Ll~~~~~~~~~-------------~~~g~t~L~~A~~~g~-~~iv~~Ll~~g~~~~~~~~~~~t~l  711 (838)
                      |+|+..|+.+++++|+++|++....             ...+.++++.+...+. ......+...+.+++..+..|.|||
T Consensus        83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L  162 (282)
T 1oy3_D           83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL  162 (282)
T ss_dssp             HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred             HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHH
Confidence            9999999999999999988764322             1234556666555543 3444556666888999999999999


Q ss_pred             HHHHhcCCHHHHHHHHhCCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHH
Q psy3308         712 HLCAQEDKVNVATITMFNGAEIDPVTKA-GFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIID  790 (838)
Q Consensus       712 ~~A~~~g~~~i~~~L~~~~~~~~~~~~~-g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~  790 (838)
                      |+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.++|++|+++|++++.+|..|+||||+|++.|+.++++
T Consensus       163 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~  242 (282)
T 1oy3_D          163 HVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILAR  242 (282)
T ss_dssp             HHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHH
Confidence            9999999999999999999999998854 999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCCccch-HHHHHHcCC
Q psy3308         791 LLLGAGAQPNATTNLFCC-ATILVKNGA  817 (838)
Q Consensus       791 ~Ll~~ga~~~~~~~~~~~-~~~~~~~~~  817 (838)
                      +|+++|++++.+|..|.| ++++.....
T Consensus       243 ~Ll~~ga~~~~~~~~g~tpl~~a~~~~~  270 (282)
T 1oy3_D          243 LLRAHGAPEPEDGGDKLSPCSSSGSDSD  270 (282)
T ss_dssp             HHHHTTCCCCCCC---------------
T ss_pred             HHHHcCCCcCcCCCcccccccccCCccc
Confidence            999999999999999999 998877554

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=4.2e-37  Score=298.38  Aligned_cols=216  Identities=26%  Similarity=0.320  Sum_probs=206.3

Q ss_pred             CcHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCC
Q psy3308         586 GRMKIAQMLLQKDAPVDSQ-GKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN  664 (838)
Q Consensus       586 ~~~~~v~~Ll~~~~~~~~~-~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~  664 (838)
                      |+.+++++|+++|++++.. +..|.|||++|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|++.+
T Consensus         2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~   81 (223)
T 2f8y_A            2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR   81 (223)
T ss_dssp             ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred             CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence            5788899999999999875 789999999999999999999999999999999999999999999999999999999998


Q ss_pred             C-CCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q psy3308         665 A-KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTP  743 (838)
Q Consensus       665 ~-~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~  743 (838)
                      . +++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus        82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~  161 (223)
T 2f8y_A           82 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP  161 (223)
T ss_dssp             TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred             CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCH
Confidence            7 889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCC
Q psy3308         744 LHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA  801 (838)
Q Consensus       744 l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~  801 (838)
                      ||+|+..|+.+++++|+++|++++..|..|.|||++|++.++.+++++|+++|+....
T Consensus       162 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~  219 (223)
T 2f8y_A          162 LFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSP  219 (223)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCccc
Confidence            9999999999999999999999999999999999999999999999999999997654

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=1e-37  Score=308.49  Aligned_cols=214  Identities=26%  Similarity=0.322  Sum_probs=177.8

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--------CCccCCCCChHHHHHHHcCcH-HHHHHHHhCCCCCCCCCCCC
Q psy3308         604 QGKNGVTPLHVASHYDHQNVALLLLDRGAS--------PHAVAKNGYTPLHIAAKKNQM-DIATTLLEYNAKPNAESKAG  674 (838)
Q Consensus       604 ~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~--------~~~~~~~~~t~L~~A~~~~~~-~iv~~Ll~~~~~~~~~~~~g  674 (838)
                      +|..+.+||+.|+..|+.++|++|++.|++        ++..+..+.|||+.|+..+.. .++++|++.|++++.+|..|
T Consensus         7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G   86 (269)
T 4b93_B            7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDG   86 (269)
T ss_dssp             CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTS
T ss_pred             cCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCC
Confidence            455667899999999999999999999875        345567789999999988775 58899999999999999999


Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy3308         675 FTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLN  754 (838)
Q Consensus       675 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~  754 (838)
                      +||||+|+..|+.++|++|++.|++++..+..|.||++.|+..++.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus        87 ~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~  166 (269)
T 4b93_B           87 SSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHE  166 (269)
T ss_dssp             CCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGG
T ss_pred             CCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHHcCC
Q psy3308         755 MVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVKNGA  817 (838)
Q Consensus       755 ~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~~~~  817 (838)
                      +|++|+++|+++|..+..|+||||+|++.|+.++|++|+++|+|++.+|..|.| +++|++++.
T Consensus       167 ~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~  230 (269)
T 4b93_B          167 LVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK  230 (269)
T ss_dssp             GHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred             HHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence            999999999999999999999999999999999999999999999999999999 999988775

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=1.8e-37  Score=311.21  Aligned_cols=226  Identities=14%  Similarity=0.164  Sum_probs=211.7

Q ss_pred             ccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHH
Q psy3308         568 ITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHI  647 (838)
Q Consensus       568 ~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~  647 (838)
                      ++..+..|.||||.|+..|+.+++++|+++|++++..  +|.||||+|+..|+.+++++|+++|++++..+..|.||||+
T Consensus        24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~  101 (285)
T 3kea_A           24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYY  101 (285)
T ss_dssp             TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHH
Confidence            5677889999999999999999999999999999887  48999999999999999999999999999999999999999


Q ss_pred             HHHcCcHHHHHHHHhCCCCCCCCCCCC-CcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHH
Q psy3308         648 AAKKNQMDIATTLLEYNAKPNAESKAG-FTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATIT  726 (838)
Q Consensus       648 A~~~~~~~iv~~Ll~~~~~~~~~~~~g-~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L  726 (838)
                      |+..|+.+++++|+++|++++..+..| .|||++|+..|+.+++++|+++|++.... ..|.||||+|+..|+.+++++|
T Consensus       102 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~L  180 (285)
T 3kea_A          102 AVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILL  180 (285)
T ss_dssp             HHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHH
T ss_pred             HHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHH
Confidence            999999999999999999999999999 79999999999999999999999877332 2899999999999999999999


Q ss_pred             HhCCCCCCCCCCCCCcH-HHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCC
Q psy3308         727 MFNGAEIDPVTKAGFTP-LHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT  803 (838)
Q Consensus       727 ~~~~~~~~~~~~~g~t~-l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~  803 (838)
                      +++|++++.++..|+|| ||+|+..|+.+++++|+++|++++..|.       .|+..|+.++|++|+++|++++..+
T Consensus       181 l~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~~~~~  251 (285)
T 3kea_A          181 LDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVEYKSDS  251 (285)
T ss_dssp             HHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHHTTCT
T ss_pred             HHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCCCCcc
Confidence            99999999999999998 9999999999999999999999999873       6788999999999999999887654

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=3e-36  Score=293.58  Aligned_cols=218  Identities=25%  Similarity=0.351  Sum_probs=174.1

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCC--CCCCc-cCCCCChHHHHHHH
Q psy3308         575 GFTPLHLAAKYGRMKIAQMLLQKDAPVDS-QGKNGVTPLHVASHYDHQNVALLLLDRG--ASPHA-VAKNGYTPLHIAAK  650 (838)
Q Consensus       575 ~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~-~~~~~~~~l~~A~~~~~~~~v~~Ll~~g--~~~~~-~~~~~~t~L~~A~~  650 (838)
                      |.||||.|+..|+.+++++|++.+.++.. .+..|.||||+|+..|+.+++++|+++|  .+++. .+..|.||||.|+.
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~   81 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS   81 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence            46788888888888888888888766543 6778888888888888888888888888  44444 56778888888888


Q ss_pred             cCcHHHHHHHHhCC--CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHh
Q psy3308         651 KNQMDIATTLLEYN--AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMF  728 (838)
Q Consensus       651 ~~~~~iv~~Ll~~~--~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~  728 (838)
                      .|+.+++++|+++|  ++++..+..|.|||++|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++
T Consensus        82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  161 (228)
T 2dzn_A           82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG  161 (228)
T ss_dssp             HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            88888888888877  7777778888888888888888888888888888888888888888888888888888888888


Q ss_pred             CC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-HCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         729 NG-AEIDPVTKAGFTPLHIASHFGQLNMVRYLV-ENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       729 ~~-~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      +| ++++.+|..|+||||+|+..|+.+++++|+ ++|++++..|..|.|||++|++.   +++++|+++
T Consensus       162 ~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~~  227 (228)
T 2dzn_A          162 LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLNN  227 (228)
T ss_dssp             TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHTT
T ss_pred             cCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHhc
Confidence            88 788888888888888888888888888888 77888888888888888888654   566666653

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=4.4e-36  Score=292.92  Aligned_cols=227  Identities=32%  Similarity=0.403  Sum_probs=213.5

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy3308         524 KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS  603 (838)
Q Consensus       524 ~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~  603 (838)
                      .+.+||+.|+..|+.+++++|++.+..                ..+..+..|.|||+.|+..|+.+++++|++.|++++.
T Consensus         5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~----------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~   68 (231)
T 3aji_A            5 VSNIMICNLAYSGKLDELKERILADKS----------------LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND   68 (231)
T ss_dssp             CSSSHHHHHHHHTCHHHHHHHHHHCGG----------------GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC
T ss_pred             cccchHHHHHHhCCHHHHHHHHHhchh----------------hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCC
Confidence            456788888889999988888875432                2355677899999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy3308         604 QGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQ  683 (838)
Q Consensus       604 ~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~  683 (838)
                      .+..|.|||++|+..++.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++..+..|.|||++|+.
T Consensus        69 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~  148 (231)
T 3aji_A           69 KDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAA  148 (231)
T ss_dssp             CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             cCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy3308         684 EGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENG  763 (838)
Q Consensus       684 ~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g  763 (838)
                      .|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|+|||++|+..++.+++++|.++|
T Consensus       149 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~  228 (231)
T 3aji_A          149 KGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEE  228 (231)
T ss_dssp             HTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCC
Q psy3308         764 ANV  766 (838)
Q Consensus       764 ~~~  766 (838)
                      +++
T Consensus       229 a~i  231 (231)
T 3aji_A          229 ASM  231 (231)
T ss_dssp             HCC
T ss_pred             ccC
Confidence            763

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=1.1e-36  Score=305.46  Aligned_cols=237  Identities=18%  Similarity=0.241  Sum_probs=202.4

Q ss_pred             cCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy3308          72 TGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKG  151 (838)
Q Consensus        72 ~g~~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~  151 (838)
                      ....+++++|.+.  +++.+|..|+||||+|+..|+.++|++|+++|++++..  .|.||||+||..|+.++|++|+++|
T Consensus        10 ~~~~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g   85 (285)
T 3kea_A           10 WKSKQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSG   85 (285)
T ss_dssp             CCHHHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTT
T ss_pred             cCHHHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCC
Confidence            4556666666655  57899999999999999999999999999999988776  4899999999999999999999999


Q ss_pred             CCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCC-ccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccH
Q psy3308         152 ANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNG-LAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTA  230 (838)
Q Consensus       152 ~~~~~~~~~~~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~-~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~  230 (838)
                      ++++..+..|.||||+|+..|+.++|++|++.|++++..+..| .|||++|+..|+.+++++|+++|.+.... ..+.||
T Consensus        86 a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~  164 (285)
T 3kea_A           86 LDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSC  164 (285)
T ss_dssp             CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHH
T ss_pred             CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccH
Confidence            9999999999999999999999999999999999999899988 79999999999999999999999876332 278899


Q ss_pred             HHHHHhcCCHHHHHHHHHCCCCccccccCCCch-HHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy3308         231 LHVASHCGHVRVAKTLLDRKADPNARALNGFTP-LHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIAC  309 (838)
Q Consensus       231 l~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~-l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~  309 (838)
                      |++|+..|+.+++++|+++|++++..+..|.|| |++|+..+        +.+++++|+++|++++..+.       .|+
T Consensus       165 L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~--------~~~~v~~Ll~~gad~~~~~~-------~a~  229 (285)
T 3kea_A          165 IHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNK--------DIEMLQALFKYDINIYSANL-------ENV  229 (285)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHT--------CHHHHHHHTTSCBCSTTTTG-------GGG
T ss_pred             HHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcC--------CHHHHHHHHHcCCCCCCCCh-------hhh
Confidence            999999999999999999998888887777776 77777766        56677777777777766552       356


Q ss_pred             HcCCHHHHHHHHhCCCCcc
Q psy3308         310 KKNRYKVVELLLKYGASIA  328 (838)
Q Consensus       310 ~~g~~~~v~~L~~~~~~~~  328 (838)
                      ..|+.+++++|+++|+++.
T Consensus       230 ~~~~~~iv~~Ll~~g~~~~  248 (285)
T 3kea_A          230 LLDDAEIAKMIIEKHVEYK  248 (285)
T ss_dssp             TTTCHHHHHHHHHHHHHHT
T ss_pred             hcCCHHHHHHHHHcCCCCC
Confidence            6677777777777766554

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=4.2e-36  Score=303.52  Aligned_cols=250  Identities=25%  Similarity=0.297  Sum_probs=164.2

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy3308         521 TTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAP  600 (838)
Q Consensus       521 ~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~  600 (838)
                      ++..|.|||++|+..|+.+++++|++.+....              .++..+..|.||||+|+..|+.+++++|+++|++
T Consensus         5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~   70 (282)
T 1oy3_D            5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHE--------------YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG   70 (282)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSG--------------GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc--------------cccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            44455555555555555555555554332210              1234455566666666666666666666666666


Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc-------------CCCCChHHHHHHHcCcH-HHHHHHHhCCCC
Q psy3308         601 VDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAV-------------AKNGYTPLHIAAKKNQM-DIATTLLEYNAK  666 (838)
Q Consensus       601 ~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~-------------~~~~~t~L~~A~~~~~~-~iv~~Ll~~~~~  666 (838)
                      ++.++..|.|||++|+..++.+++++|+++|++....             ...+.++++.++..+.. .....+...+.+
T Consensus        71 ~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (282)
T 1oy3_D           71 VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQ  150 (282)
T ss_dssp             SSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGG
T ss_pred             CCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhc
Confidence            6666666666666666666666666666665543221             12344566666555433 344555567888


Q ss_pred             CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCC-CCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q psy3308         667 PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN-GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLH  745 (838)
Q Consensus       667 ~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~-~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~  745 (838)
                      ++..+..|.||||+|+..|+.++|++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.++..|+||||
T Consensus       151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~  230 (282)
T 1oy3_D          151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLG  230 (282)
T ss_dssp             TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHH
Confidence            9999999999999999999999999999999999998854 999999999999999999999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhC
Q psy3308         746 IASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQG  784 (838)
Q Consensus       746 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~  784 (838)
                      +|+..|+.+++++|+++|++++.++..|.|||++|....
T Consensus       231 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~  269 (282)
T 1oy3_D          231 SALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDS  269 (282)
T ss_dssp             HHHTSSCHHHHHHHHHTTCCCCCCC--------------
T ss_pred             HHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence            999999999999999999999999999999999998654

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=1.4e-35  Score=288.89  Aligned_cols=208  Identities=25%  Similarity=0.326  Sum_probs=197.0

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCc-cCCCCChHHHHHHHcCcHHHHHHHHhCC--CCCCC-CCCCCCcHHHHHHH
Q psy3308         608 GVTPLHVASHYDHQNVALLLLDRGASPHA-VAKNGYTPLHIAAKKNQMDIATTLLEYN--AKPNA-ESKAGFTPLHLSAQ  683 (838)
Q Consensus       608 ~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~~t~L~~A~~~~~~~iv~~Ll~~~--~~~~~-~~~~g~t~L~~A~~  683 (838)
                      |.|||+.|+..|+.+++++|++.+.+... .+..|.||||+|+..|+.+++++|++.|  .+++. .+..|.|||++|+.
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~   81 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS   81 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence            67999999999999999999999887665 7889999999999999999999999999  55555 77899999999999


Q ss_pred             cCcHHHHHHHHhCC--CCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy3308         684 EGHTDMSSLLIEHG--ATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE  761 (838)
Q Consensus       684 ~g~~~iv~~Ll~~g--~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~  761 (838)
                      .|+.+++++|+++|  ++++..+..|.||||.|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|++
T Consensus        82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  161 (228)
T 2dzn_A           82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG  161 (228)
T ss_dssp             HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            99999999999998  8899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CC-CCCccCCCCCCcHHHHHHHhCcHHHHHHHH-hCCCCCCCCCCccch-HHHHHHc
Q psy3308         762 NG-ANVNATTNLGYTPLHQASQQGRVLIIDLLL-GAGAQPNATTNLFCC-ATILVKN  815 (838)
Q Consensus       762 ~g-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~~~~-~~~~~~~  815 (838)
                      +| ++++..|..|+||||+|++.|+.+++++|+ ++|++++.+|..|.| +++|.+.
T Consensus       162 ~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~  218 (228)
T 2dzn_A          162 LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE  218 (228)
T ss_dssp             TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred             cCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence            99 999999999999999999999999999999 889999999999999 9998654

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=100.00  E-value=1.9e-35  Score=301.23  Aligned_cols=236  Identities=22%  Similarity=0.270  Sum_probs=206.2

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHc
Q psy3308         572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKK  651 (838)
Q Consensus       572 ~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~  651 (838)
                      +..+.|||+.|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus        37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~  116 (299)
T 1s70_B           37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC  116 (299)
T ss_dssp             EECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             ccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence            34667999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCC
Q psy3308         652 NQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH-GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNG  730 (838)
Q Consensus       652 ~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~  730 (838)
                      |+.+++++|+++|++++..+..|.|||++|+..++.+++++|+.. |.+++.....+.+++..       .+..++....
T Consensus       117 g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~~  189 (299)
T 1s70_B          117 GYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLR-------DARQWLNSGH  189 (299)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH-------HHHHHHHHTC
T ss_pred             CCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHH-------HHHHHHhccC
Confidence            999999999999999999999999999999999999999988764 55554433333333322       2333444444


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-H
Q psy3308         731 AEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-A  809 (838)
Q Consensus       731 ~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~  809 (838)
                      ......+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|++.|+.++|++|+++|++++.+|..|+| +
T Consensus       190 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l  269 (299)
T 1s70_B          190 INDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAF  269 (299)
T ss_dssp             CCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTT
T ss_pred             cchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence            444556778999999999999999999999999999999999999999999999999999999999999999999999 8


Q ss_pred             HHHHH
Q psy3308         810 TILVK  814 (838)
Q Consensus       810 ~~~~~  814 (838)
                      ++|.+
T Consensus       270 ~~A~~  274 (299)
T 1s70_B          270 DVADE  274 (299)
T ss_dssp             TSCCS
T ss_pred             HHHHH
Confidence            88854

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=1.9e-34  Score=283.82  Aligned_cols=231  Identities=27%  Similarity=0.254  Sum_probs=149.9

Q ss_pred             ccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCcHHHH
Q psy3308          89 NVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTR-DGLTPLHC  167 (838)
Q Consensus        89 ~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~-~~~tal~~  167 (838)
                      +..|..+.++|+.|+..|+++++++|+++|.+++..+..|.|||++|+..|+.++|++|+++|.+++.... .|.|||++
T Consensus         3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~   82 (240)
T 3eu9_A            3 THIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHW   82 (240)
T ss_dssp             CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHH
T ss_pred             cccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHH
Confidence            34456667777777777777777777777777777777777777777777777777777777776654433 36777777


Q ss_pred             HHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCC-HHHHHHH
Q psy3308         168 AARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGH-VRVAKTL  246 (838)
Q Consensus       168 A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~-~~iv~~L  246 (838)
                      |+..|+.+++++|++.|++++..+..|.+||++|+..|+.+++++|+++|++++..+..+.|||++|+..++ .++    
T Consensus        83 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~----  158 (240)
T 3eu9_A           83 ATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDP----  158 (240)
T ss_dssp             HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTT----
T ss_pred             HHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHH----
Confidence            777777777777777766666555555566666655555555555555555555555555555555554333 444    


Q ss_pred             HHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy3308         247 LDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARAL-NGFTPLHIACKKNRYKVVELLLKYGA  325 (838)
Q Consensus       247 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~-~~~~~l~~A~~~g~~~~v~~L~~~~~  325 (838)
                                                           +++|++.|++++..+. .|.||||.|+..|+.+++++|+++|+
T Consensus       159 -------------------------------------~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  201 (240)
T 3eu9_A          159 -------------------------------------TRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGA  201 (240)
T ss_dssp             -------------------------------------HHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred             -------------------------------------HHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence                                                 4555555555554454 56677777777777777777777777


Q ss_pred             CccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy3308         326 SIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAP  360 (838)
Q Consensus       326 ~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~  360 (838)
                      +++..+..|.|||++|+..|+.+++++|++.+...
T Consensus       202 ~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~  236 (240)
T 3eu9_A          202 NVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK  236 (240)
T ss_dssp             CTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred             CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence            77766777777777777777777777777665543

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=6.5e-35  Score=282.91  Aligned_cols=216  Identities=26%  Similarity=0.304  Sum_probs=202.9

Q ss_pred             cCcHHHHHHHHHCCCCcccC-CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHc
Q psy3308          72 TGQEEVAKILVDNGATINVQ-SLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISK  150 (838)
Q Consensus        72 ~g~~~~v~~l~~~~~~~~~~-~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~  150 (838)
                      .|+.+++++|+++|.+++.. |..|+||||+|+..|+.++|++|+++|++++..+..|.|||++|+..|+.++|++|+++
T Consensus         1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~   80 (223)
T 2f8y_A            1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN   80 (223)
T ss_dssp             ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred             CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            36788899999999998875 88999999999999999999999999999999999999999999999999999999999


Q ss_pred             CC-CCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCcc
Q psy3308         151 GA-NIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLT  229 (838)
Q Consensus       151 ~~-~~~~~~~~~~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~  229 (838)
                      +. +++..+..|.|||++|+..|+.+++++|++.|++++..+..|.|||++|+..|+.+++++|+++|++++..+..+.|
T Consensus        81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  160 (223)
T 2f8y_A           81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREET  160 (223)
T ss_dssp             TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred             CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcC
Confidence            87 78888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCC
Q psy3308         230 ALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPN  295 (838)
Q Consensus       230 ~l~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~  295 (838)
                      ||++|+..|+.+++++|+++|++++..+..+.||+++|+..+        +.+++++|+++|+...
T Consensus       161 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~--------~~~i~~~L~~~g~~~~  218 (223)
T 2f8y_A          161 PLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERM--------HHDIVRLLDEYNLVRS  218 (223)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT--------CHHHHHHHHHTTCSSC
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhc--------chHHHHHHHHcCCCcc
Confidence            999999999999999999999999999999999999999987        7789999999988654

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=100.00  E-value=3.9e-34  Score=259.36  Aligned_cols=159  Identities=34%  Similarity=0.516  Sum_probs=149.3

Q ss_pred             hHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHH
Q psy3308         643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNV  722 (838)
Q Consensus       643 t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i  722 (838)
                      ++|+.|++.|+.++|++|+++|++++.+|..|+|||++|+..++.+++++|+++|++++.++..|.||||+|+..|+.++
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~   85 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV   85 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCC
Q psy3308         723 ATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA  801 (838)
Q Consensus       723 ~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~  801 (838)
                      +++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+|||++|++.|+.+++++|+++||+++.
T Consensus        86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~  164 (169)
T 4gpm_A           86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH  164 (169)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred             HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999998864

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=100.00  E-value=1.6e-34  Score=294.35  Aligned_cols=272  Identities=23%  Similarity=0.280  Sum_probs=184.4

Q ss_pred             hhhcCcHHHHHHHHHCCCCcccC---------CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcC
Q psy3308          69 FEATGQEEVAKILVDNGATINVQ---------SLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWG  139 (838)
Q Consensus        69 ~~~~g~~~~v~~l~~~~~~~~~~---------~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g  139 (838)
                      +++.|+.+.++.++....++...         +..+.|||+.||..|++++|++|+++|++++..+..|.||||+||..|
T Consensus         5 ~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g   84 (299)
T 1s70_B            5 DAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDD   84 (299)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence            45666777777776665443321         223457777777777777777777777777777777777777777777


Q ss_pred             CHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCC
Q psy3308         140 KVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAG  219 (838)
Q Consensus       140 ~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~  219 (838)
                      +.++|++|+++|++++..+..|.||||+|+..|+.++|++|+++|++++..+..|.|||++|+..|+.+++++++...  
T Consensus        85 ~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~--  162 (299)
T 1s70_B           85 NVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ--  162 (299)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHH--
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhc--
Confidence            777777777777777777777777777777777777777777777777666666777777777666666666665431  


Q ss_pred             CCcccCCCccHHHHHHhcCCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCC
Q psy3308         220 VDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARAL  299 (838)
Q Consensus       220 ~~~~~~~~~~~l~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~  299 (838)
                                                    +.+++.....+.+++               ...+..++..........+.
T Consensus       163 ------------------------------~~~~~~~~~~~~~~~---------------~~~~~~~l~~~~~~~~~~~~  197 (299)
T 1s70_B          163 ------------------------------GVDIEAARKEEERIM---------------LRDARQWLNSGHINDVRHAK  197 (299)
T ss_dssp             ------------------------------TCCHHHHHHHHHHHH---------------HHHHHHHHHHTCCCCCCCTT
T ss_pred             ------------------------------CCCchhhhhhhhhHH---------------HHHHHHHHhccCcchhhhcC
Confidence                                          111111100000000               01122333333333444566


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCc
Q psy3308         300 NGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQ  379 (838)
Q Consensus       300 ~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~  379 (838)
                      .|.||||.|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||+++|++. .
T Consensus       198 ~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~-~  276 (299)
T 1s70_B          198 SGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED-I  276 (299)
T ss_dssp             TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG-G
T ss_pred             CCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH-H
Confidence            788888888888888888888888888888888888888888888888888888888888888888888888888654 3


Q ss_pred             HHHHHHHHH
Q psy3308         380 TDIVRILLR  388 (838)
Q Consensus       380 ~~iv~~Ll~  388 (838)
                      .+.++.+++
T Consensus       277 ~~~l~~l~~  285 (299)
T 1s70_B          277 LGYLEELQK  285 (299)
T ss_dssp             GHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            444444444

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=100.00  E-value=2.1e-36  Score=309.96  Aligned_cols=268  Identities=14%  Similarity=0.104  Sum_probs=164.1

Q ss_pred             cCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy3308         469 LGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD  548 (838)
Q Consensus       469 ~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~  548 (838)
                      ....+++++|+++|++++..+..|.++++     |+.+++++|+++|++++.      +++..|+......     ..  
T Consensus        29 ~~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~------~~~~~a~~~~~~~-----~~--   90 (327)
T 1sw6_A           29 TFTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEI------QEMPTSLNNDSSN-----RN--   90 (327)
T ss_dssp             ECCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------
T ss_pred             hhcCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCcc------ccchHhhhccccc-----cc--
Confidence            45567788888888888888888888765     788888888888776432      2444443221000     00  


Q ss_pred             CCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHH
Q psy3308         549 APVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS-QGKNGVTPLHVASHYDHQNVALLL  627 (838)
Q Consensus       549 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~-~~~~~~~~l~~A~~~~~~~~v~~L  627 (838)
                                          ........+..+.++..+..+++++|++.|+++|. ++..|.||||+|+..|+.+++++|
T Consensus        91 --------------------~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~L  150 (327)
T 1sw6_A           91 --------------------SEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHL  150 (327)
T ss_dssp             ---------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHH
T ss_pred             --------------------ccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHH
Confidence                                00011122345777777778888888888888888 788888888888888888888888


Q ss_pred             HhCCCCCCccCCCCChHHHHHHHcCc---HHHHHHHHhCC-CCCCCCCCCCCcHHHHHHH----cCcHHHHHHHHhC---
Q psy3308         628 LDRGASPHAVAKNGYTPLHIAAKKNQ---MDIATTLLEYN-AKPNAESKAGFTPLHLSAQ----EGHTDMSSLLIEH---  696 (838)
Q Consensus       628 l~~g~~~~~~~~~~~t~L~~A~~~~~---~~iv~~Ll~~~-~~~~~~~~~g~t~L~~A~~----~g~~~iv~~Ll~~---  696 (838)
                      +++|++++..+..|+||||+|+..|+   .++++.|++++ .+++.++..|+||||+|+.    .|+.+++++|++.   
T Consensus       151 l~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~  230 (327)
T 1sw6_A          151 VKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMG  230 (327)
T ss_dssp             HHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHH
Confidence            88888888888888888888888887   67777777765 6678888888888888888    7888888888876   


Q ss_pred             -----------------CCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy3308         697 -----------------GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL  759 (838)
Q Consensus       697 -----------------g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~L  759 (838)
                                       |++++..+..|.||||.|+.      +++|+++  +++.+|..|+||||+|+..|+.++|++|
T Consensus       231 ~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~L  302 (327)
T 1sw6_A          231 WIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDAL  302 (327)
T ss_dssp             HHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred             HHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence                             44444444444444444443      4444443  2444444444444444444444444444


Q ss_pred             HHCCCCCccCCCCCCcHHHHHHH
Q psy3308         760 VENGANVNATTNLGYTPLHQASQ  782 (838)
Q Consensus       760 l~~g~~~~~~~~~g~t~l~~A~~  782 (838)
                      +++|++++.+|..|+||||+|++
T Consensus       303 l~~Gad~~~~d~~G~TpL~~A~~  325 (327)
T 1sw6_A          303 LDYGADPFIANKSGLRPVDFGAG  325 (327)
T ss_dssp             HHTTCCTTCCCTTSCCGGGGTCC
T ss_pred             HHcCCCCcccCCCCCCHHHHHHh
Confidence            44444444444444444444443

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=100.00  E-value=8.4e-36  Score=305.46  Aligned_cols=243  Identities=16%  Similarity=0.093  Sum_probs=198.8

Q ss_pred             HhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-----------------CCCCcHHHHHHHcCCHHH
Q psy3308         561 LTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG-----------------KNGVTPLHVASHYDHQNV  623 (838)
Q Consensus       561 l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~-----------------~~~~~~l~~A~~~~~~~~  623 (838)
                      +++.|.+++..+..|.++++     |+.++|++|+++|++++...                 ....+..+.|+..+..++
T Consensus        38 ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  112 (327)
T 1sw6_A           38 FLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEV  112 (327)
T ss_dssp             TTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHHHHHH
T ss_pred             HhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHH
Confidence            33455667778888999876     99999999999998865411                 111223467777788899


Q ss_pred             HHHHHhCCCCCCc-cCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCc---HHHHHHHHhCC-C
Q psy3308         624 ALLLLDRGASPHA-VAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGH---TDMSSLLIEHG-A  698 (838)
Q Consensus       624 v~~Ll~~g~~~~~-~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~---~~iv~~Ll~~g-~  698 (838)
                      +++|++.|++++. .+..|.||||+|+..|+.++|++|+++|++++.++..|+||||+|+..|+   .++++.|++.+ +
T Consensus       113 ~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~  192 (327)
T 1sw6_A          113 NDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP  192 (327)
T ss_dssp             HHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG
T ss_pred             HHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhc
Confidence            9999999999999 89999999999999999999999999999999999999999999999998   67888888776 6


Q ss_pred             CCCCCCCCCCcHhHHHHh----cCCHHHHHHHHhC--------------------CCCCCCCCCCCCcHHHHHHHcCCHH
Q psy3308         699 TVSHQAKNGLTPLHLCAQ----EDKVNVATITMFN--------------------GAEIDPVTKAGFTPLHIASHFGQLN  754 (838)
Q Consensus       699 ~~~~~~~~~~t~l~~A~~----~g~~~i~~~L~~~--------------------~~~~~~~~~~g~t~l~~A~~~g~~~  754 (838)
                      +++.++..|.||||+|+.    .|+.+++++|++.                    |++++.++..|+||||+|+.     
T Consensus       193 ~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~-----  267 (327)
T 1sw6_A          193 CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD-----  267 (327)
T ss_dssp             GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS-----
T ss_pred             cccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH-----
Confidence            789999999999999999    8999999999987                    89999999999999999986     


Q ss_pred             HHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHHcC
Q psy3308         755 MVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVKNG  816 (838)
Q Consensus       755 ~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~~~  816 (838)
                       +++|+++  ++|.+|..|+||||+|++.|+.++|++|+++|+|++.+|..|.| +++|+++|
T Consensus       268 -~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g  327 (327)
T 1sw6_A          268 -LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE  327 (327)
T ss_dssp             -HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred             -HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence             9999998  68899999999999999999999999999999999999999999 99998764

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=100.00  E-value=2.6e-35  Score=288.10  Aligned_cols=212  Identities=24%  Similarity=0.277  Sum_probs=173.3

Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHhCCC----CCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHH
Q psy3308         603 SQGKNGVTPLHVASHYDHQNVALLLLDRGA----SPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPL  678 (838)
Q Consensus       603 ~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L  678 (838)
                      .+|..|.||||+|+..|+.+++++|++.+.    +++..+..|.||||+|+..|+.+++++|+++|++++.++..|.|||
T Consensus         3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L   82 (236)
T 1ikn_D            3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL   82 (236)
T ss_dssp             ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred             cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence            356677777888877777777777776654    5777777788888888888888888888888888888888888888


Q ss_pred             HHHHHcCcHHHHHHHHhCCCC------CCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcC
Q psy3308         679 HLSAQEGHTDMSSLLIEHGAT------VSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTK-AGFTPLHIASHFG  751 (838)
Q Consensus       679 ~~A~~~g~~~iv~~Ll~~g~~------~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~-~g~t~l~~A~~~g  751 (838)
                      ++|+..|+.+++++|+++|++      ++..+..|.||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|
T Consensus        83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~  162 (236)
T 1ikn_D           83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ  162 (236)
T ss_dssp             HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred             HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence            888888888888888888765      456777899999999999999999999999999998887 8999999999999


Q ss_pred             CHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCC--CCCCccch-HHHHHH
Q psy3308         752 QLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN--ATTNLFCC-ATILVK  814 (838)
Q Consensus       752 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~~~~-~~~~~~  814 (838)
                      +.+++++|+++|++++..|..|.|||++|+..|+.+++++|+++|+++.  .++..+.| .+....
T Consensus       163 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~  228 (236)
T 1ikn_D          163 NPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESE  228 (236)
T ss_dssp             CHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred             CHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence            9999999999999999999999999999999999999999999999876  77888877 555443

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=100.00  E-value=8.9e-33  Score=262.91  Aligned_cols=191  Identities=23%  Similarity=0.345  Sum_probs=173.9

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCC-CCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy3308         606 KNGVTPLHVASHYDHQNVALLLLDRGA-SPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQE  684 (838)
Q Consensus       606 ~~~~~~l~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~  684 (838)
                      ..+.+||+.|+..|+.+.++.|++.+. +++..+..|.||||.|+..|+.+++++|+++|++++..+..|.|||++|+..
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~   82 (201)
T 3hra_A            3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ   82 (201)
T ss_dssp             CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence            356788999999999988888888865 8888888899999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHH-hCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHcCC-----HHHHH
Q psy3308         685 GHTDMSSLLI-EHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNG-AEIDPVTKAGFTPLHIASHFGQ-----LNMVR  757 (838)
Q Consensus       685 g~~~iv~~Ll-~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~-~~~~~~~~~g~t~l~~A~~~g~-----~~~v~  757 (838)
                      |+.+++++|+ ..+++++..+..|.||||+|+..|+.+++++|+++| ++++.++..|+||||+|+..++     .++++
T Consensus        83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~  162 (201)
T 3hra_A           83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVK  162 (201)
T ss_dssp             TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHH
T ss_pred             CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHH
Confidence            9999999999 567788888999999999999999999999999998 8999999999999999999988     99999


Q ss_pred             HHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCC
Q psy3308         758 YLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG  796 (838)
Q Consensus       758 ~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g  796 (838)
                      +|+++|++++..|..|.|||++|++.|+.+++++|+++|
T Consensus       163 ~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G  201 (201)
T 3hra_A          163 LLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN  201 (201)
T ss_dssp             HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred             HHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence            999999999999999999999999999999999999987

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=100.00  E-value=1.8e-34  Score=282.05  Aligned_cols=215  Identities=24%  Similarity=0.292  Sum_probs=194.8

Q ss_pred             ccCCCCCcHHHHHHHcCcHHHHHHHHhCCC----CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHH
Q psy3308         570 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDA----PVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPL  645 (838)
Q Consensus       570 ~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~----~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L  645 (838)
                      ..+..|.||||.|+..|+.+++++|++.+.    +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||
T Consensus         3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L   82 (236)
T 1ikn_D            3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL   82 (236)
T ss_dssp             ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred             cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence            457789999999999999999999998765    6899999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCcHHHHHHHHhCCCC------CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCC-CCCcHhHHHHhcC
Q psy3308         646 HIAAKKNQMDIATTLLEYNAK------PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAK-NGLTPLHLCAQED  718 (838)
Q Consensus       646 ~~A~~~~~~~iv~~Ll~~~~~------~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~-~~~t~l~~A~~~g  718 (838)
                      |+|+..|+.+++++|+++|.+      ++..+..|.||||+|+..|+.++|++|+++|++++.++. .|.||||+|+..|
T Consensus        83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~  162 (236)
T 1ikn_D           83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ  162 (236)
T ss_dssp             HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred             HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence            999999999999999999876      466778899999999999999999999999999999997 9999999999999


Q ss_pred             CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCc--cCCCCCCcHHHHHHHhC
Q psy3308         719 KVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN--ATTNLGYTPLHQASQQG  784 (838)
Q Consensus       719 ~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~l~~A~~~~  784 (838)
                      +.+++++|+++|++++.++..|+|||++|+..|+.+++++|+++|+++.  .++..|.||.+.+....
T Consensus       163 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~  230 (236)
T 1ikn_D          163 NPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFT  230 (236)
T ss_dssp             CHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC----
T ss_pred             CHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcccc
Confidence            9999999999999999999999999999999999999999999999876  77888899887766443

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=100.00  E-value=1.5e-33  Score=282.33  Aligned_cols=206  Identities=22%  Similarity=0.254  Sum_probs=151.9

Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHh----CCCCCC----ccCCCCChHHHHHHHc---CcHHHHHHHHhCCCC----
Q psy3308         602 DSQGKNGVTPLHVASHYDHQNVALLLLD----RGASPH----AVAKNGYTPLHIAAKK---NQMDIATTLLEYNAK----  666 (838)
Q Consensus       602 ~~~~~~~~~~l~~A~~~~~~~~v~~Ll~----~g~~~~----~~~~~~~t~L~~A~~~---~~~~iv~~Ll~~~~~----  666 (838)
                      +..+..|.|||+.|+..|+.++++.|++    .+.+++    ..+..|.||||+|+..   |+.+++++|+++|++    
T Consensus         7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~   86 (273)
T 2pnn_A            7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL   86 (273)
T ss_dssp             ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred             CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence            3345555556666666665555555444    344443    2345566666666654   666666666665433    


Q ss_pred             -------CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCC--------------CCCcHhHHHHhcCCHHHHHH
Q psy3308         667 -------PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAK--------------NGLTPLHLCAQEDKVNVATI  725 (838)
Q Consensus       667 -------~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~--------------~~~t~l~~A~~~g~~~i~~~  725 (838)
                             ....+..|.||||+|+..|+.++|++|+++|++++..+.              .|.||||+|+..|+.+++++
T Consensus        87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~  166 (273)
T 2pnn_A           87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKF  166 (273)
T ss_dssp             HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHH
T ss_pred             hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence                   122456788888888888888888888888888888776              79999999999999999999


Q ss_pred             HHh---CCCCCCCCCCCCCcHHHHHHHcCC---------HHHHHHHHHCCCCCc-------cCCCCCCcHHHHHHHhCcH
Q psy3308         726 TMF---NGAEIDPVTKAGFTPLHIASHFGQ---------LNMVRYLVENGANVN-------ATTNLGYTPLHQASQQGRV  786 (838)
Q Consensus       726 L~~---~~~~~~~~~~~g~t~l~~A~~~g~---------~~~v~~Ll~~g~~~~-------~~~~~g~t~l~~A~~~~~~  786 (838)
                      |++   +|++++.+|..|+||||+|+..|+         .+++++|+++|++++       ..|..|+||||+|++.|+.
T Consensus       167 Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~  246 (273)
T 2pnn_A          167 LLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKI  246 (273)
T ss_dssp             HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred             HHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChH
Confidence            999   899999999999999999999998         899999999999997       4899999999999999999


Q ss_pred             HHHHHHHhCCC-CCCCCCCccc
Q psy3308         787 LIIDLLLGAGA-QPNATTNLFC  807 (838)
Q Consensus       787 ~~v~~Ll~~ga-~~~~~~~~~~  807 (838)
                      ++|++|+++|| ||..+...+.
T Consensus       247 ~iv~~Ll~~ga~dp~~~~~~~~  268 (273)
T 2pnn_A          247 GVLAYILQREIHEPECRHAAAH  268 (273)
T ss_dssp             HHHHHHHHHHTC----------
T ss_pred             HHHHHHHHCCCCCchhhhhhhh
Confidence            99999999999 8887766554

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=100.00  E-value=2.9e-32  Score=247.01  Aligned_cols=159  Identities=31%  Similarity=0.498  Sum_probs=131.9

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHH
Q psy3308         610 TPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDM  689 (838)
Q Consensus       610 ~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~i  689 (838)
                      ++|+.|+..|+.++|++|+++|++++..+..|+|||+.|+..++.+++++|++.|++++.++..|+|||++|+..|+.++
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~   85 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV   85 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence            36778888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcc
Q psy3308         690 SSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNA  768 (838)
Q Consensus       690 v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~  768 (838)
                      |++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++|++++.
T Consensus        86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~  164 (169)
T 4gpm_A           86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH  164 (169)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred             HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence            8888888888888888888888888888888888888888888888888888888888888888888888888888754

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=100.00  E-value=2.1e-33  Score=278.33  Aligned_cols=193  Identities=22%  Similarity=0.233  Sum_probs=154.5

Q ss_pred             CCcHHHHHHHcCCHH----HHHHHHhCCCCCCc----cCCCCChHHHHHHHc---CcHHHHHHHHhCCCCCCC-------
Q psy3308         608 GVTPLHVASHYDHQN----VALLLLDRGASPHA----VAKNGYTPLHIAAKK---NQMDIATTLLEYNAKPNA-------  669 (838)
Q Consensus       608 ~~~~l~~A~~~~~~~----~v~~Ll~~g~~~~~----~~~~~~t~L~~A~~~---~~~~iv~~Ll~~~~~~~~-------  669 (838)
                      |.||||.|+..|+.+    ++++|++.|++++.    .+..|.||||+|+..   |+.+++++|++.|++++.       
T Consensus         2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~   81 (256)
T 2etb_A            2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA   81 (256)
T ss_dssp             CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred             CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence            456666666666664    44555556666665    566666666666666   666666666666555442       


Q ss_pred             ----CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCC-------------CCcHhHHHHhcCCHHHHHHHHh---C
Q psy3308         670 ----ESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN-------------GLTPLHLCAQEDKVNVATITMF---N  729 (838)
Q Consensus       670 ----~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~-------------~~t~l~~A~~~g~~~i~~~L~~---~  729 (838)
                          .+..|.||||+|+..|+.++|++|+++|++++..+..             |.||||+|+..|+.+++++|++   +
T Consensus        82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~  161 (256)
T 2etb_A           82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ  161 (256)
T ss_dssp             CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred             ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence                2356778888888888888888888888887777765             9999999999999999999999   8


Q ss_pred             CCCCCCCCCCCCcHHHHHHH--cCCHH-------HHHHHHHCCCCC-------ccCCCCCCcHHHHHHHhCcHHHHHHHH
Q psy3308         730 GAEIDPVTKAGFTPLHIASH--FGQLN-------MVRYLVENGANV-------NATTNLGYTPLHQASQQGRVLIIDLLL  793 (838)
Q Consensus       730 ~~~~~~~~~~g~t~l~~A~~--~g~~~-------~v~~Ll~~g~~~-------~~~~~~g~t~l~~A~~~~~~~~v~~Ll  793 (838)
                      |++++.+|..|+||||+|+.  .++.+       ++++|+++|+++       +..|..|+||||+|++.|+.+++++|+
T Consensus       162 ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll  241 (256)
T 2etb_A          162 PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHIL  241 (256)
T ss_dssp             CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHH
Confidence            99999999999999999998  78888       999999999999       899999999999999999999999999


Q ss_pred             hCCCCCC
Q psy3308         794 GAGAQPN  800 (838)
Q Consensus       794 ~~ga~~~  800 (838)
                      ++|+++.
T Consensus       242 ~~g~~~~  248 (256)
T 2etb_A          242 QREFSGA  248 (256)
T ss_dssp             HHHHHHH
T ss_pred             hCCCCCC
Confidence            9987553

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=100.00  E-value=2.2e-31  Score=253.28  Aligned_cols=190  Identities=25%  Similarity=0.323  Sum_probs=183.6

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcC
Q psy3308         574 KGFTPLHLAAKYGRMKIAQMLLQKDA-PVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKN  652 (838)
Q Consensus       574 ~~~~~l~~a~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~  652 (838)
                      .+.+||+.|+..|+.+.+++|++.+. +++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||||.|+..|
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~   83 (201)
T 3hra_A            4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQG   83 (201)
T ss_dssp             CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence            56899999999999999999999876 99999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCC-CCCCCCCCCCCcHhHHHHhcCC-----HHHHHH
Q psy3308         653 QMDIATTLL-EYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHG-ATVSHQAKNGLTPLHLCAQEDK-----VNVATI  725 (838)
Q Consensus       653 ~~~iv~~Ll-~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~~t~l~~A~~~g~-----~~i~~~  725 (838)
                      +.+++++|+ ..+.+++..+..|.|||++|+..|+.+++++|+++| ++++.++..|.||||+|+..++     .+++++
T Consensus        84 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~  163 (201)
T 3hra_A           84 RTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKL  163 (201)
T ss_dssp             CHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHH
T ss_pred             CHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHH
Confidence            999999999 577899999999999999999999999999999999 9999999999999999999998     999999


Q ss_pred             HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy3308         726 TMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENG  763 (838)
Q Consensus       726 L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g  763 (838)
                      |+++|++++.+|..|+|||++|+..|+.+++++|+++|
T Consensus       164 Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G  201 (201)
T 3hra_A          164 LMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN  201 (201)
T ss_dssp             HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred             HHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence            99999999999999999999999999999999999986

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.97  E-value=3.8e-32  Score=272.08  Aligned_cols=209  Identities=21%  Similarity=0.270  Sum_probs=177.1

Q ss_pred             ccccCCCCCcHHHHHHHcCcHHHHHHHHh----CCCCCC----CCCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCC--
Q psy3308         568 ITATTKKGFTPLHLAAKYGRMKIAQMLLQ----KDAPVD----SQGKNGVTPLHVASHY---DHQNVALLLLDRGASP--  634 (838)
Q Consensus       568 ~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~----~~~~~~----~~~~~~~~~l~~A~~~---~~~~~v~~Ll~~g~~~--  634 (838)
                      .+..+..|.|||+.|+..|+.++|+.|++    .+.+++    ..+..|.||||+|+..   |+.+++++|++.|+++  
T Consensus         6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~   85 (273)
T 2pnn_A            6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS   85 (273)
T ss_dssp             -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred             CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence            34567789999999999999998888876    566666    4578999999999987   9999999999998653  


Q ss_pred             -----C----ccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCC--------------CCCcHHHHHHHcCcHHHHH
Q psy3308         635 -----H----AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESK--------------AGFTPLHLSAQEGHTDMSS  691 (838)
Q Consensus       635 -----~----~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~--------------~g~t~L~~A~~~g~~~iv~  691 (838)
                           +    ..+..|.||||+|+..|+.+++++|+++|++++..+.              .|.||||+|+..|+.++|+
T Consensus        86 ~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~  165 (273)
T 2pnn_A           86 LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVK  165 (273)
T ss_dssp             HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHH
T ss_pred             hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence                 2    2456899999999999999999999999999999987              7999999999999999999


Q ss_pred             HHHh---CCCCCCCCCCCCCcHhHHHHhcCC---------HHHHHHHHhCCCCCC-------CCCCCCCcHHHHHHHcCC
Q psy3308         692 LLIE---HGATVSHQAKNGLTPLHLCAQEDK---------VNVATITMFNGAEID-------PVTKAGFTPLHIASHFGQ  752 (838)
Q Consensus       692 ~Ll~---~g~~~~~~~~~~~t~l~~A~~~g~---------~~i~~~L~~~~~~~~-------~~~~~g~t~l~~A~~~g~  752 (838)
                      +|++   +|++++.++..|.||||+|+..|+         .+++++|+++|++++       .+|..|+||||+|+..|+
T Consensus       166 ~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~  245 (273)
T 2pnn_A          166 FLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGK  245 (273)
T ss_dssp             HHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred             HHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhCh
Confidence            9999   999999999999999999999998         899999999999987       489999999999999999


Q ss_pred             HHHHHHHHHCCC-CCccCCCCCCcH
Q psy3308         753 LNMVRYLVENGA-NVNATTNLGYTP  776 (838)
Q Consensus       753 ~~~v~~Ll~~g~-~~~~~~~~g~t~  776 (838)
                      .+++++|+++|+ |+......+.+|
T Consensus       246 ~~iv~~Ll~~ga~dp~~~~~~~~~~  270 (273)
T 2pnn_A          246 IGVLAYILQREIHEPECRHAAAHHH  270 (273)
T ss_dssp             HHHHHHHHHHHTC------------
T ss_pred             HHHHHHHHHCCCCCchhhhhhhhhc
Confidence            999999999999 888877766655

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.97  E-value=5.1e-32  Score=268.38  Aligned_cols=193  Identities=21%  Similarity=0.255  Sum_probs=180.8

Q ss_pred             CCcHHHHHHHcCcHH----HHHHHHhCCCCCCC----CCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCccC-----
Q psy3308         575 GFTPLHLAAKYGRMK----IAQMLLQKDAPVDS----QGKNGVTPLHVASHY---DHQNVALLLLDRGASPHAVA-----  638 (838)
Q Consensus       575 ~~~~l~~a~~~~~~~----~v~~Ll~~~~~~~~----~~~~~~~~l~~A~~~---~~~~~v~~Ll~~g~~~~~~~-----  638 (838)
                      |.||||.|+..|+.+    ++++|++.|++++.    .+..|.||||+|+..   |+.+++++|++.|++++..+     
T Consensus         2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~   81 (256)
T 2etb_A            2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA   81 (256)
T ss_dssp             CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred             CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence            679999999999997    77888889999998    899999999999999   99999999999988876433     


Q ss_pred             ------CCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCC-------------CCcHHHHHHHcCcHHHHHHHHh---C
Q psy3308         639 ------KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKA-------------GFTPLHLSAQEGHTDMSSLLIE---H  696 (838)
Q Consensus       639 ------~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~-------------g~t~L~~A~~~g~~~iv~~Ll~---~  696 (838)
                            ..|.||||+|+..|+.+++++|+++|++++..+..             |.||||+|+..|+.++|++|++   +
T Consensus        82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~  161 (256)
T 2etb_A           82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ  161 (256)
T ss_dssp             CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred             ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence                  67999999999999999999999999999999886             9999999999999999999999   9


Q ss_pred             CCCCCCCCCCCCcHhHHHHh--cCCHH-------HHHHHHhCCCCC-------CCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy3308         697 GATVSHQAKNGLTPLHLCAQ--EDKVN-------VATITMFNGAEI-------DPVTKAGFTPLHIASHFGQLNMVRYLV  760 (838)
Q Consensus       697 g~~~~~~~~~~~t~l~~A~~--~g~~~-------i~~~L~~~~~~~-------~~~~~~g~t~l~~A~~~g~~~~v~~Ll  760 (838)
                      |++++.++..|.||||+|+.  .++.+       ++++|+++|+++       +.+|..|+||||+|+..|+.+++++|+
T Consensus       162 ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll  241 (256)
T 2etb_A          162 PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHIL  241 (256)
T ss_dssp             CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHH
Confidence            99999999999999999999  88888       999999999999       889999999999999999999999999


Q ss_pred             HCCCCCc
Q psy3308         761 ENGANVN  767 (838)
Q Consensus       761 ~~g~~~~  767 (838)
                      ++|+++.
T Consensus       242 ~~g~~~~  248 (256)
T 2etb_A          242 QREFSGA  248 (256)
T ss_dssp             HHHHHHH
T ss_pred             hCCCCCC
Confidence            9987653

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.97  E-value=8e-32  Score=267.83  Aligned_cols=196  Identities=22%  Similarity=0.213  Sum_probs=152.4

Q ss_pred             CCCcHHHHHHHcCCHHH----HHHHHhCCCCCCccC----CCCChHHHHHH---HcCcHHHHHHHHhCC-----------
Q psy3308         607 NGVTPLHVASHYDHQNV----ALLLLDRGASPHAVA----KNGYTPLHIAA---KKNQMDIATTLLEYN-----------  664 (838)
Q Consensus       607 ~~~~~l~~A~~~~~~~~----v~~Ll~~g~~~~~~~----~~~~t~L~~A~---~~~~~~iv~~Ll~~~-----------  664 (838)
                      .+.++|+.|+..|+.+.    +++|++.|++++..+    ..|.||||+|+   ..|+.+++++|++.|           
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~   83 (260)
T 3jxi_A            4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN   83 (260)
T ss_dssp             CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred             chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence            34455555555555553    333333555555443    44666666666   446666666666654           


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC--------------CCCCcHhHHHHhcCCHHHHHHHHh--
Q psy3308         665 AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA--------------KNGLTPLHLCAQEDKVNVATITMF--  728 (838)
Q Consensus       665 ~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~--------------~~~~t~l~~A~~~g~~~i~~~L~~--  728 (838)
                      ..++..+..|+||||+|+..|+.++|++|+++|++++..+              ..|.||||+|+..|+.+++++|++  
T Consensus        84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~  163 (260)
T 3jxi_A           84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG  163 (260)
T ss_dssp             CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred             ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence            2334455578888888888888888888888888888887              579999999999999999999999  


Q ss_pred             -CCCCCCCCCCCCCcHHHHHHHcCC---------HHHHHHHHHCCCCC-------ccCCCCCCcHHHHHHHhCcHHHHHH
Q psy3308         729 -NGAEIDPVTKAGFTPLHIASHFGQ---------LNMVRYLVENGANV-------NATTNLGYTPLHQASQQGRVLIIDL  791 (838)
Q Consensus       729 -~~~~~~~~~~~g~t~l~~A~~~g~---------~~~v~~Ll~~g~~~-------~~~~~~g~t~l~~A~~~~~~~~v~~  791 (838)
                       +|++++.+|..|+||||+|+..|+         .+++++|+++|+++       +..|..|+||||+|++.|+.++|++
T Consensus       164 ~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~  243 (260)
T 3jxi_A          164 HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQH  243 (260)
T ss_dssp             SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHH
Confidence             899999999999999999998887         79999999999998       6799999999999999999999999


Q ss_pred             HHhCCCCCCCC
Q psy3308         792 LLGAGAQPNAT  802 (838)
Q Consensus       792 Ll~~ga~~~~~  802 (838)
                      |+++|+++...
T Consensus       244 Ll~~g~~~~~~  254 (260)
T 3jxi_A          244 IIRREIADAAA  254 (260)
T ss_dssp             HHHHHHHHHC-
T ss_pred             HHHhCCCcccc
Confidence            99998866543

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.97  E-value=1.9e-29  Score=231.54  Aligned_cols=158  Identities=33%  Similarity=0.531  Sum_probs=148.3

Q ss_pred             CCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcC
Q psy3308         639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQED  718 (838)
Q Consensus       639 ~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g  718 (838)
                      ..+.++|+.|+..|+.++|++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus        12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   91 (169)
T 2y1l_E           12 SDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG   91 (169)
T ss_dssp             -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            34568999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCC
Q psy3308         719 KVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG  796 (838)
Q Consensus       719 ~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g  796 (838)
                      +.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.|||++|++.|+.+++++|+++|
T Consensus        92 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G  169 (169)
T 2y1l_E           92 HLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN  169 (169)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999986

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.97  E-value=5e-30  Score=236.59  Aligned_cols=168  Identities=21%  Similarity=0.258  Sum_probs=149.1

Q ss_pred             CChHHHHHHHcCcHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCC
Q psy3308         641 GYTPLHIAAKKNQMDIATTLLEYNAK-PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDK  719 (838)
Q Consensus       641 ~~t~L~~A~~~~~~~iv~~Ll~~~~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~  719 (838)
                      +.+|||.|+..|+.+++++|++.+.+ ++..+..|.|||++|+..|+.++|++|+++|++++..+..|.||||+|+..|+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   81 (172)
T 3v30_A            2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY   81 (172)
T ss_dssp             --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred             chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence            35789999999999999999988876 78888889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCC
Q psy3308         720 VNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP  799 (838)
Q Consensus       720 ~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~  799 (838)
                      .+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++..|..|.|||++|++.|+.+++++|+++|+++
T Consensus        82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~  161 (172)
T 3v30_A           82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL  161 (172)
T ss_dssp             HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCccch
Q psy3308         800 NATTNLFCC  808 (838)
Q Consensus       800 ~~~~~~~~~  808 (838)
                      ..++..+.|
T Consensus       162 ~~~~~~~~~  170 (172)
T 3v30_A          162 FQSNLVPAD  170 (172)
T ss_dssp             SCC------
T ss_pred             hcccCCCCC
Confidence            888877765

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.97  E-value=5.8e-30  Score=240.90  Aligned_cols=163  Identities=23%  Similarity=0.296  Sum_probs=147.2

Q ss_pred             CCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHH
Q psy3308         634 PHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHL  713 (838)
Q Consensus       634 ~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~  713 (838)
                      ++..+..|+||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+
T Consensus        28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~  107 (192)
T 2rfm_A           28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW  107 (192)
T ss_dssp             HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred             HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence            34567788889999998888999999998888888888888999999999999999999999999998888899999999


Q ss_pred             HHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHH
Q psy3308         714 CAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL  793 (838)
Q Consensus       714 A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll  793 (838)
                      |+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++..|..|.|||++|+..|+.+++++|+
T Consensus       108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll  187 (192)
T 2rfm_A          108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT  187 (192)
T ss_dssp             HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCC
Q psy3308         794 GAG  796 (838)
Q Consensus       794 ~~g  796 (838)
                      ++|
T Consensus       188 ~~~  190 (192)
T 2rfm_A          188 EVR  190 (192)
T ss_dssp             HHH
T ss_pred             hcc
Confidence            864

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.97  E-value=8.7e-30  Score=232.60  Aligned_cols=158  Identities=25%  Similarity=0.351  Sum_probs=148.2

Q ss_pred             CCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCC
Q psy3308         640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDK  719 (838)
Q Consensus       640 ~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~  719 (838)
                      ...|||+.|+..|+.+++++|++.|++++..+..|.|||++|+. |+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   82 (162)
T 1ihb_A            4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF   82 (162)
T ss_dssp             -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred             hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence            45689999999999999999999999999999999999999999 99999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCC
Q psy3308         720 VNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN-VNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQ  798 (838)
Q Consensus       720 ~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~  798 (838)
                      .+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++ ++..|..|.|||++|++.|+.+++++|+++|||
T Consensus        83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd  162 (162)
T 1ihb_A           83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG  162 (162)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred             HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence            9999999999999999999999999999999999999999999998 599999999999999999999999999999986

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.97  E-value=2.4e-30  Score=257.85  Aligned_cols=186  Identities=21%  Similarity=0.296  Sum_probs=166.2

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCC--CCccCCCCChHHHHHHHcCcHHHHHHHHhCCC-CCCCCCCCCCcHHHHHH----
Q psy3308         610 TPLHVASHYDHQNVALLLLDRGAS--PHAVAKNGYTPLHIAAKKNQMDIATTLLEYNA-KPNAESKAGFTPLHLSA----  682 (838)
Q Consensus       610 ~~l~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~-~~~~~~~~g~t~L~~A~----  682 (838)
                      ++++.|+..++.+.++.+++.+.+  ++..|..|.||||+|+..|+.+++++|++.|+ +++..+..|.|||++|+    
T Consensus        78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~  157 (276)
T 4hbd_A           78 SDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATL  157 (276)
T ss_dssp             TTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCC
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHh
Confidence            456677777777777777766554  77788888999999999999999999999887 88888889999999988    


Q ss_pred             -HcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy3308         683 -QEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE  761 (838)
Q Consensus       683 -~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~  761 (838)
                       ..++.+++++|++.|...+..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus       158 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~  237 (276)
T 4hbd_A          158 KTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLA  237 (276)
T ss_dssp             CSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred             hhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence             6688999999999998888888899999999999999999999999999999999999999999999999999999999


Q ss_pred             -CCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         762 -NGANVNATTNLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       762 -~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                       .|++++..|..|.|||++|++.|+.+++++|+++
T Consensus       238 ~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~  272 (276)
T 4hbd_A          238 VPSCDISLTDRDGSTALMVALDAGQSEIASMLYSR  272 (276)
T ss_dssp             STTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred             cCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence             8999999999999999999999999999999986

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.97  E-value=1.3e-29  Score=232.44  Aligned_cols=161  Identities=22%  Similarity=0.303  Sum_probs=152.5

Q ss_pred             CCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCC
Q psy3308         640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDK  719 (838)
Q Consensus       640 ~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~  719 (838)
                      .|.||||.|+..|+.+++++|++.|.+++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   81 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY   81 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCC
Q psy3308         720 VNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP  799 (838)
Q Consensus       720 ~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~  799 (838)
                      .+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++..|..|.|||++|++.|+.+++++|++++++.
T Consensus        82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~  161 (167)
T 3v31_A           82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL  161 (167)
T ss_dssp             HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987654


Q ss_pred             C
Q psy3308         800 N  800 (838)
Q Consensus       800 ~  800 (838)
                      .
T Consensus       162 ~  162 (167)
T 3v31_A          162 L  162 (167)
T ss_dssp             C
T ss_pred             H
Confidence            3

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.96  E-value=1.3e-32  Score=282.48  Aligned_cols=254  Identities=12%  Similarity=0.119  Sum_probs=124.0

Q ss_pred             cHHHHHHHcCcHHHHHHHHHCCCCC---CccccCCCcHHHHHHHcCCHHHHHHHHHcCCCC---ccccCCCCcHHHHHHH
Q psy3308          97 TPLYMAAQENHDGVVRYLLSKGGNQ---TLATEHNITPLHVACKWGKVAMVELLISKGANI---EAKTRDGLTPLHCAAR  170 (838)
Q Consensus        97 t~l~~A~~~g~~~~v~~L~~~~~~~---~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~---~~~~~~~~tal~~A~~  170 (838)
                      ||||+|+..|+.++|++|+++|+..   +..+..|.||||+||.+|+.++|++|+++|+++   +..+.+ .||||+||.
T Consensus        94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~  172 (376)
T 2aja_A           94 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAE  172 (376)
T ss_dssp             HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHH
Confidence            6666666666666666666665521   122334456666666666666666666666431   111222 566666666


Q ss_pred             cCCHHHHHHHHHcCCCccC--CCCCCccHHHHHH-hCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHH
Q psy3308         171 SGHDNVIDILIEKGAALYS--KTKNGLAPLHMAS-QGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLL  247 (838)
Q Consensus       171 ~g~~~iv~~L~~~~~~~~~--~~~~~~~~l~~A~-~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~  247 (838)
                      .|+.++|++|+++|++++.  .+..|.|||++|+ .+|+.++|++|+++|.       .+.|||+.|+.+|+.+++++|+
T Consensus       173 ~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~  245 (376)
T 2aja_A          173 NGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIA  245 (376)
T ss_dssp             TTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHH
T ss_pred             CCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHH
Confidence            6666666666666666443  4455566666666 6666666666666542       2456666666666666666666


Q ss_pred             HCCCCccccccCCCchHHHHHhhCCccccccC----hHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy3308         248 DRKADPNARALNGFTPLHIACKKNRYKSSHCN----HVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKY  323 (838)
Q Consensus       248 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~----~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~  323 (838)
                      ++|++++..+    ++++.|+.+|..+.....    ...+++.|+..+.                  .+..+.+++|++.
T Consensus       246 ~~ga~~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~------------------~~~~~~~~~Ll~~  303 (376)
T 2aja_A          246 RHVNRLKEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRND------------------EVLLDDIRFLLSI  303 (376)
T ss_dssp             HHHHHHHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCC------------------GGGHHHHHHHHTS
T ss_pred             hcCccccccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcch------------------hhHHHHHHHHHhC
Confidence            6665544432    244445544443321100    1113344444321                  1224445555542


Q ss_pred             ---------CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q psy3308         324 ---------GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILL  387 (838)
Q Consensus       324 ---------~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll  387 (838)
                               |+++    ..+.+||++|+..|+.+++++|++.+   ...+..+.+++.+|-..|+.++.+.-.
T Consensus       304 ~~vk~l~~~g~~~----n~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~  369 (376)
T 2aja_A          304 PGIKALAPTATIP----GDANELLRLALRLGNQGACALLLSIP---SVLALTKANNYYINETGGRLDLRAVAL  369 (376)
T ss_dssp             TTTGGGSSCCSST----TCCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC--------------------
T ss_pred             hhhhhhhccCCCC----CCccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhccccccccccccHHHHHH
Confidence                     2222    23446677777777777777776543   334445566666666667666666544

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.96  E-value=2.4e-30  Score=257.18  Aligned_cols=196  Identities=21%  Similarity=0.257  Sum_probs=177.0

Q ss_pred             CCCCcHHHHHHHcCcHH----HHHHHHhCCCCCCCCC----CCCCcHHHHHH---HcCCHHHHHHHHhCCCC--------
Q psy3308         573 KKGFTPLHLAAKYGRMK----IAQMLLQKDAPVDSQG----KNGVTPLHVAS---HYDHQNVALLLLDRGAS--------  633 (838)
Q Consensus       573 ~~~~~~l~~a~~~~~~~----~v~~Ll~~~~~~~~~~----~~~~~~l~~A~---~~~~~~~v~~Ll~~g~~--------  633 (838)
                      ..+.++|+.|+..|+.+    ++++|++.+.+++..+    ..|.||||+|+   ..|+.+++++|++.|++        
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~   82 (260)
T 3jxi_A            3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI   82 (260)
T ss_dssp             CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred             cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence            45779999999999999    4555556899998665    67999999999   67999999999998744        


Q ss_pred             ---CCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCC--------------CCCCcHHHHHHHcCcHHHHHHHHh-
Q psy3308         634 ---PHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAES--------------KAGFTPLHLSAQEGHTDMSSLLIE-  695 (838)
Q Consensus       634 ---~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~--------------~~g~t~L~~A~~~g~~~iv~~Ll~-  695 (838)
                         .+..+..|.||||+|+..|+.++|++|+++|++++..+              ..|.||||+|+..|+.++|++|++ 
T Consensus        83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~  162 (260)
T 3jxi_A           83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN  162 (260)
T ss_dssp             TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred             cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence               34445589999999999999999999999999999998              689999999999999999999999 


Q ss_pred             --CCCCCCCCCCCCCcHhHHHHhcCC---------HHHHHHHHhCCCCC-------CCCCCCCCcHHHHHHHcCCHHHHH
Q psy3308         696 --HGATVSHQAKNGLTPLHLCAQEDK---------VNVATITMFNGAEI-------DPVTKAGFTPLHIASHFGQLNMVR  757 (838)
Q Consensus       696 --~g~~~~~~~~~~~t~l~~A~~~g~---------~~i~~~L~~~~~~~-------~~~~~~g~t~l~~A~~~g~~~~v~  757 (838)
                        +|++++.++..|.||||+|+..|+         .+++++|+++|+++       +.+|..|+||||+|+..|+.++++
T Consensus       163 ~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~  242 (260)
T 3jxi_A          163 GHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ  242 (260)
T ss_dssp             SSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             cccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence              999999999999999999998887         79999999999998       679999999999999999999999


Q ss_pred             HHHHCCCCCcc
Q psy3308         758 YLVENGANVNA  768 (838)
Q Consensus       758 ~Ll~~g~~~~~  768 (838)
                      +|+++|+++..
T Consensus       243 ~Ll~~g~~~~~  253 (260)
T 3jxi_A          243 HIIRREIADAA  253 (260)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHhCCCccc
Confidence            99999876543

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.96  E-value=5.8e-29  Score=230.90  Aligned_cols=168  Identities=25%  Similarity=0.353  Sum_probs=156.0

Q ss_pred             CCChHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcC
Q psy3308         640 NGYTPLHIAAKKNQMDIATTLLEY-NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQED  718 (838)
Q Consensus       640 ~~~t~L~~A~~~~~~~iv~~Ll~~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g  718 (838)
                      .+.++|+.|+..|+.+++++|++. +.+++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus         4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   83 (179)
T 3f6q_A            4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG   83 (179)
T ss_dssp             ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            466899999999999999999987 6778999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCC
Q psy3308         719 KVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQ  798 (838)
Q Consensus       719 ~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~  798 (838)
                      +.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.|||++|+..++.+++++|+++|++
T Consensus        84 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~  163 (179)
T 3f6q_A           84 HRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQN  163 (179)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccc
Q psy3308         799 PNATTNLFC  807 (838)
Q Consensus       799 ~~~~~~~~~  807 (838)
                      ++..+..+.
T Consensus       164 ~~~~~~~~~  172 (179)
T 3f6q_A          164 LNRIPYKDT  172 (179)
T ss_dssp             CSCBCCCCT
T ss_pred             cccCCcccc
Confidence            998776553

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.96  E-value=1.2e-31  Score=275.35  Aligned_cols=287  Identities=16%  Similarity=0.120  Sum_probs=186.2

Q ss_pred             cCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHH-cCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHc
Q psy3308          72 TGQEEVAKILVDNGATINVQSLNGFTPLYMAAQ-ENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISK  150 (838)
Q Consensus        72 ~g~~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~-~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~  150 (838)
                      .+..+.+..++++..+++..  .+.+++++|.. .++.+++++|+++|.+.       .||||+||+.|+.++|++|+++
T Consensus        44 ~~~~~~~~~~~~~~~~~~~~--~~ll~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~  114 (376)
T 2aja_A           44 LSYKEAIHIFLPGTKNMEQV--RQLLCLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAITGCSSALDTLCLL  114 (376)
T ss_dssp             SCHHHHHHHCCCCSSHHHHH--HHHHHHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHHHCCHHHHHHHTTC
T ss_pred             ccHHHHHHHHhcCCCCHHHH--HHHHHHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHHcCCHHHHHHHHHc
Confidence            34555555555544333221  23456777666 57788888888876652       3888888888888888888888


Q ss_pred             CCCC---ccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCc---cCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCc--
Q psy3308         151 GANI---EAKTRDGLTPLHCAARSGHDNVIDILIEKGAAL---YSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDE--  222 (838)
Q Consensus       151 ~~~~---~~~~~~~~tal~~A~~~g~~~iv~~L~~~~~~~---~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~--  222 (838)
                      |+..   +..+..+.||||+||+.|+.++|++|+++|++.   +..+.. .|||++|+..|+.++|++|+++|++++.  
T Consensus       115 ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~  193 (376)
T 2aja_A          115 LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAM  193 (376)
T ss_dssp             --CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHH
T ss_pred             CCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhc
Confidence            7621   123445678888888888888888888888641   112222 7888888888888888888888877665  


Q ss_pred             ccCCCccHHHHHH-hcCCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCC
Q psy3308         223 ITVDYLTALHVAS-HCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNG  301 (838)
Q Consensus       223 ~~~~~~~~l~~A~-~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~  301 (838)
                      .+..+.|||++|+ .+|+.++|++|++.|.       .+.||++.|+.+|        +.+++++|+++|++++..+   
T Consensus       194 ~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g--------~~evv~lL~~~ga~~~~~~---  255 (376)
T 2aja_A          194 IQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYG--------EKYVNPFIARHVNRLKEMH---  255 (376)
T ss_dssp             HHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTT--------TTTHHHHHHHHHHHHHHHH---
T ss_pred             cCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCC--------CHHHHHHHHhcCccccccc---
Confidence            6667788888888 8888888888887653       2678888888877        5568888888877665443   


Q ss_pred             CcHHHHHHHcCCHHH------------HHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc---------CCCC
Q psy3308         302 FTPLHIACKKNRYKV------------VELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQA---------GAAP  360 (838)
Q Consensus       302 ~~~l~~A~~~g~~~~------------v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~---------~~~~  360 (838)
                       ++++.|+.+|++++            ++.|+..+                  ..+..+.+++|++.         |.++
T Consensus       256 -~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~------------------~~~~~~~~~~Ll~~~~vk~l~~~g~~~  316 (376)
T 2aja_A          256 -DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRN------------------DEVLLDDIRFLLSIPGIKALAPTATIP  316 (376)
T ss_dssp             -TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHC------------------CGGGHHHHHHHHTSTTTGGGSSCCSST
T ss_pred             -HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcc------------------hhhHHHHHHHHHhChhhhhhhccCCCC
Confidence             35667777777663            34444432                  12345666777653         3332


Q ss_pred             CCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCccccccCCCCHHHHHHhhCc
Q psy3308         361 DTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRR  412 (838)
Q Consensus       361 ~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~~~~~~~  412 (838)
                      +    .+.+++++|+..|+.+++++|++.|   ...+..+.++..++.....
T Consensus       317 n----~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~~~~~~~~~~  361 (376)
T 2aja_A          317 G----DANELLRLALRLGNQGACALLLSIP---SVLALTKANNYYINETGGR  361 (376)
T ss_dssp             T----CCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC------------
T ss_pred             C----CccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhcccccccccc
Confidence            2    3457888888888888888888754   4455666677666555443

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.96  E-value=2e-28  Score=220.53  Aligned_cols=150  Identities=27%  Similarity=0.393  Sum_probs=140.3

Q ss_pred             ChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHH
Q psy3308         642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVN  721 (838)
Q Consensus       642 ~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~  721 (838)
                      .++|+.|+..|+.+++++|++.|.+++ .+..|.|||++|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus         3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~   81 (153)
T 1awc_B            3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN   81 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred             cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence            478999999999999999999998876 5778899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHH
Q psy3308         722 VATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLL  792 (838)
Q Consensus       722 i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L  792 (838)
                      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|++.|+.+++++|
T Consensus        82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B           82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.96  E-value=8e-29  Score=228.52  Aligned_cols=168  Identities=21%  Similarity=0.334  Sum_probs=144.8

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCC-CCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcH
Q psy3308         609 VTPLHVASHYDHQNVALLLLDRGAS-PHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHT  687 (838)
Q Consensus       609 ~~~l~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~  687 (838)
                      .+||+.|+..|+.+++++|++.+.. ++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.
T Consensus         3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~   82 (172)
T 3v30_A            3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYT   82 (172)
T ss_dssp             -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred             hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCH
Confidence            5788888888888888888888776 777788889999999999999999999999999998888899999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCc
Q psy3308         688 DMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN  767 (838)
Q Consensus       688 ~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~  767 (838)
                      +++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|+|||++|+..|+.+++++|+++|+++.
T Consensus        83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~  162 (172)
T 3v30_A           83 DIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF  162 (172)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence            99999999999999889999999999999999999999999999999999999999999999999999999999998888


Q ss_pred             cCCCCCCcH
Q psy3308         768 ATTNLGYTP  776 (838)
Q Consensus       768 ~~~~~g~t~  776 (838)
                      ..+..|.||
T Consensus       163 ~~~~~~~~p  171 (172)
T 3v30_A          163 QSNLVPADP  171 (172)
T ss_dssp             CC-------
T ss_pred             cccCCCCCC
Confidence            888777776

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.96  E-value=3.8e-29  Score=249.14  Aligned_cols=187  Identities=22%  Similarity=0.300  Sum_probs=179.0

Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CCCccCCCCChHHHHHH---
Q psy3308         576 FTPLHLAAKYGRMKIAQMLLQKDAP--VDSQGKNGVTPLHVASHYDHQNVALLLLDRGA-SPHAVAKNGYTPLHIAA---  649 (838)
Q Consensus       576 ~~~l~~a~~~~~~~~v~~Ll~~~~~--~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~~~t~L~~A~---  649 (838)
                      .++++.|+..++.+.++.+++.+.+  +|..|..|.||||+|+..|+.+++++|++.|+ +++..+..|.||||.|+   
T Consensus        77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~  156 (276)
T 4hbd_A           77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT  156 (276)
T ss_dssp             STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence            4678899999999999999887655  78899999999999999999999999999998 99999999999999999   


Q ss_pred             --HcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHH
Q psy3308         650 --KKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM  727 (838)
Q Consensus       650 --~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~  727 (838)
                        ..++.+++++|++.|..++..+..|.||||+|+..|+.++|++|+++|++++.++..|.||||+|+..|+.+++++|+
T Consensus       157 ~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll  236 (276)
T 4hbd_A          157 LKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLL  236 (276)
T ss_dssp             CCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence              678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             h-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy3308         728 F-NGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN  762 (838)
Q Consensus       728 ~-~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~  762 (838)
                      + .|++++.+|..|+|||++|+..|+.+++++|+++
T Consensus       237 ~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~  272 (276)
T 4hbd_A          237 AVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSR  272 (276)
T ss_dssp             TSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred             hcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            9 8999999999999999999999999999999986

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.96  E-value=1.6e-28  Score=231.06  Aligned_cols=162  Identities=28%  Similarity=0.344  Sum_probs=148.3

Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q psy3308         602 DSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLS  681 (838)
Q Consensus       602 ~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A  681 (838)
                      |.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|
T Consensus        29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A  108 (192)
T 2rfm_A           29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWS  108 (192)
T ss_dssp             TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHH
T ss_pred             hCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence            45778889999999999999999999999999998888899999999999999999999999999999999999999999


Q ss_pred             HHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy3308         682 AQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE  761 (838)
Q Consensus       682 ~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~  761 (838)
                      +..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+++++|++
T Consensus       109 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~  188 (192)
T 2rfm_A          109 IIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTE  188 (192)
T ss_dssp             HHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred             HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CC
Q psy3308         762 NG  763 (838)
Q Consensus       762 ~g  763 (838)
                      +|
T Consensus       189 ~~  190 (192)
T 2rfm_A          189 VR  190 (192)
T ss_dssp             HH
T ss_pred             cc
Confidence            53

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.96  E-value=1.1e-28  Score=225.93  Aligned_cols=159  Identities=29%  Similarity=0.395  Sum_probs=146.8

Q ss_pred             CCCCChHHHHHHHcCcHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHh
Q psy3308         638 AKNGYTPLHIAAKKNQMDIATTLLE-YNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQ  716 (838)
Q Consensus       638 ~~~~~t~L~~A~~~~~~~iv~~Ll~-~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~  716 (838)
                      +..+.++|+.|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus         5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   84 (165)
T 3twr_A            5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS   84 (165)
T ss_dssp             -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence            4567799999999999999999998 566778888889999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCC
Q psy3308         717 EDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG  796 (838)
Q Consensus       717 ~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g  796 (838)
                      .|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|++ |+.+++++|+++|
T Consensus        85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~g  163 (165)
T 3twr_A           85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA  163 (165)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred             cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence            999999999999999999999999999999999999999999999999999999999999999877 8999999999998


Q ss_pred             C
Q psy3308         797 A  797 (838)
Q Consensus       797 a  797 (838)
                      |
T Consensus       164 A  164 (165)
T 3twr_A          164 A  164 (165)
T ss_dssp             -
T ss_pred             c
Confidence            6

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.96  E-value=5e-28  Score=222.03  Aligned_cols=158  Identities=30%  Similarity=0.461  Sum_probs=127.3

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q psy3308         606 KNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEG  685 (838)
Q Consensus       606 ~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g  685 (838)
                      ..+.++++.|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus        12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   91 (169)
T 2y1l_E           12 SDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG   91 (169)
T ss_dssp             -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            34556778888888888888888888777777777888888888888888888888888888888888888888888888


Q ss_pred             cHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy3308         686 HTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENG  763 (838)
Q Consensus       686 ~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g  763 (838)
                      +.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|++.|
T Consensus        92 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G  169 (169)
T 2y1l_E           92 HLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN  169 (169)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence            888888888888888888888888888888888888888888888888888888888888888888888888888765

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.96  E-value=3.8e-28  Score=221.69  Aligned_cols=157  Identities=26%  Similarity=0.338  Sum_probs=125.2

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcH
Q psy3308         608 GVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHT  687 (838)
Q Consensus       608 ~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~  687 (838)
                      ..+||+.|+..|+.+++++|+++|++++..+..|.||||.|+. |+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus         5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~   83 (162)
T 1ihb_A            5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL   83 (162)
T ss_dssp             CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence            3467777777777777777777777777777777788887777 778888888888888877777788888888888888


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy3308         688 DMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAE-IDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN  765 (838)
Q Consensus       688 ~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~-~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~  765 (838)
                      +++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++ ++.++..|+|||++|+..|+.+++++|+++|+|
T Consensus        84 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd  162 (162)
T 1ihb_A           84 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG  162 (162)
T ss_dssp             HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred             HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence            888888888888888888888888888888888888888888877 577888888888888888888888888888875

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.95  E-value=4.8e-31  Score=253.95  Aligned_cols=196  Identities=20%  Similarity=0.179  Sum_probs=91.3

Q ss_pred             HHHHhCCCCCCCCC---CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy3308         592 QMLLQKDAPVDSQG---KNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPN  668 (838)
Q Consensus       592 ~~Ll~~~~~~~~~~---~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~  668 (838)
                      +.|+++|.+++..+   ..+.|||+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus         2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n   81 (229)
T 2vge_A            2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVN   81 (229)
T ss_dssp             --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred             eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence            34444444443222   233344555555555555555555555555555555555555555555555555555555555


Q ss_pred             CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCcHhHHH--HhcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q psy3308         669 AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA-KNGLTPLHLC--AQEDKVNVATITMFNGAEIDPVTKAGFTPLH  745 (838)
Q Consensus       669 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~t~l~~A--~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~  745 (838)
                      ..|..|+||||+|+..|+.+++++|+++|++++..+ ..|.||||+|  +..|+.+++++|+++|++++..+..|.||++
T Consensus        82 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~  161 (229)
T 2vge_A           82 SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALW  161 (229)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESS
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHH
Confidence            555555555555555555555555555555555443 3455555555  4555555555555555555544444444444


Q ss_pred             HHHHcCCHHHHHHHHHCCCC--CccCCCCCCcHHHHHHHhCcHHHHH
Q psy3308         746 IASHFGQLNMVRYLVENGAN--VNATTNLGYTPLHQASQQGRVLIID  790 (838)
Q Consensus       746 ~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~l~~A~~~~~~~~v~  790 (838)
                      .++..+   .+++|++.|++  ++.+|..|+||||+|++.|+.++|+
T Consensus       162 ~~~~~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~  205 (229)
T 2vge_A          162 DYSAEF---GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVP  205 (229)
T ss_dssp             CBCCSS---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEE
T ss_pred             HHhhcc---ccccCccccccccccccCCCcccHHHHHHHcCCcceee
Confidence            332222   12344444444  3444444555555555555544443

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.95  E-value=7.2e-28  Score=220.88  Aligned_cols=160  Identities=21%  Similarity=0.310  Sum_probs=132.6

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCc
Q psy3308         607 NGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGH  686 (838)
Q Consensus       607 ~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~  686 (838)
                      .|.||||.|+..|+.+++++|++.|.+++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   81 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY   81 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence            45678888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy3308         687 TDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV  766 (838)
Q Consensus       687 ~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~  766 (838)
                      .+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|+|||++|+..|+.+++++|+++++++
T Consensus        82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~  161 (167)
T 3v31_A           82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL  161 (167)
T ss_dssp             HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence            88888888888888888888888888888888888888888888888888888888888888888888888888875543

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.95  E-value=1.4e-27  Score=216.28  Aligned_cols=153  Identities=25%  Similarity=0.393  Sum_probs=141.9

Q ss_pred             CChHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCC
Q psy3308         641 GYTPLHIAAKKNQMDIATTLLEY-NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDK  719 (838)
Q Consensus       641 ~~t~L~~A~~~~~~~iv~~Ll~~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~  719 (838)
                      +.|+|+.|+..|+.+++++|++. +.+++..+..|.|||++ +..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   80 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF   80 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence            45899999999999999999987 44888889999999999 88999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         720 VNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       720 ~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++..|..|.|||++|++.|+.+++++|+++
T Consensus        81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A           81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence            9999999999999999999999999999999999999999999 99999999999999999999999999999875

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.95  E-value=2e-30  Score=249.64  Aligned_cols=207  Identities=19%  Similarity=0.173  Sum_probs=178.5

Q ss_pred             HHHHHhCCCCCCccCC---CCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy3308         624 ALLLLDRGASPHAVAK---NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATV  700 (838)
Q Consensus       624 v~~Ll~~g~~~~~~~~---~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~  700 (838)
                      ++.|+++|++++..+.   .+.||||.|+..|+.+++++|++.|++++..+..|+||||+|+..|+.++|++|+++|+++
T Consensus         1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~   80 (229)
T 2vge_A            1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV   80 (229)
T ss_dssp             ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred             CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence            4678889888876554   4567899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHH--HHcCCHHHHHHHHHCCCCCccCCCCCCcHH
Q psy3308         701 SHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVT-KAGFTPLHIA--SHFGQLNMVRYLVENGANVNATTNLGYTPL  777 (838)
Q Consensus       701 ~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~-~~g~t~l~~A--~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l  777 (838)
                      +.++..|.||||+|+..|+.+++++|+++|++++..+ ..|+|||++|  +..|+.+++++|+++|++++..|..|.||+
T Consensus        81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l  160 (229)
T 2vge_A           81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYAL  160 (229)
T ss_dssp             TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEES
T ss_pred             CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHH
Confidence            9999999999999999999999999999999999987 6999999999  999999999999999999999999999999


Q ss_pred             HHHHHhCcHHHHHHHHhCCCC--CCCCCCccch-HHHHHHcCCccCcccccccccccccC
Q psy3308         778 HQASQQGRVLIIDLLLGAGAQ--PNATTNLFCC-ATILVKNGAEIDPVTKLSDEHEKSID  834 (838)
Q Consensus       778 ~~A~~~~~~~~v~~Ll~~ga~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  834 (838)
                      +.++...   .+++|++.|++  ++.+|..|.| +++|+..|+. ++|++.+-+...++-
T Consensus       161 ~~~~~~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~-~~v~~~~l~~~p~~~  216 (229)
T 2vge_A          161 WDYSAEF---GDELSFREGESVTVLRRDGPEETDWWWAALHGQE-GYVPRNYFGLFPRVK  216 (229)
T ss_dssp             SCBCCSS---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEE-EEEEGGGEESSCCCC
T ss_pred             HHHhhcc---ccccCccccccccccccCCCcccHHHHHHHcCCc-ceeehhhhhhCCCCC
Confidence            8665544   33788999999  6788999999 9999999984 888876555544443

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.95  E-value=1.9e-27  Score=220.72  Aligned_cols=167  Identities=23%  Similarity=0.276  Sum_probs=139.1

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q psy3308         607 NGVTPLHVASHYDHQNVALLLLDR-GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEG  685 (838)
Q Consensus       607 ~~~~~l~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g  685 (838)
                      .+.++|+.|+..|+.+++++|++. +.+++..+..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus         4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   83 (179)
T 3f6q_A            4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG   83 (179)
T ss_dssp             ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            356778888888888888888887 6677778888888888888888888888888888888888888888888888888


Q ss_pred             cHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy3308         686 HTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN  765 (838)
Q Consensus       686 ~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~  765 (838)
                      +.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|+|||++|+..++.+++++|+++|++
T Consensus        84 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~  163 (179)
T 3f6q_A           84 HRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQN  163 (179)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcC
Confidence            88888888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             CccCCCCC
Q psy3308         766 VNATTNLG  773 (838)
Q Consensus       766 ~~~~~~~g  773 (838)
                      ++..+..+
T Consensus       164 ~~~~~~~~  171 (179)
T 3f6q_A          164 LNRIPYKD  171 (179)
T ss_dssp             CSCBCCCC
T ss_pred             cccCCccc
Confidence            88766543

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.95  E-value=4.3e-27  Score=211.86  Aligned_cols=150  Identities=26%  Similarity=0.397  Sum_probs=120.2

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHH
Q psy3308         609 VTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD  688 (838)
Q Consensus       609 ~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~  688 (838)
                      .+||+.|+..|+.+++++|+++|++++ .+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus         3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~   81 (153)
T 1awc_B            3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN   81 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred             cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence            367777777777777777777777665 4667778888888888888888888888888877778888888888888888


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy3308         689 MSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL  759 (838)
Q Consensus       689 iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~L  759 (838)
                      ++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|+|||++|+..|+.+++++|
T Consensus        82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B           82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            88888888888888888888888888888888888888888888888888888888888888888888876

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.95  E-value=8.2e-29  Score=241.42  Aligned_cols=183  Identities=19%  Similarity=0.244  Sum_probs=129.3

Q ss_pred             CCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcC
Q psy3308         639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQED  718 (838)
Q Consensus       639 ~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g  718 (838)
                      ..|.||||.|+..++.++++.|+++|++++.. ..|.|||+.|+..|+.++|++|+++|++++.++..|.||||+|+..|
T Consensus         3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g   81 (239)
T 1ycs_B            3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG   81 (239)
T ss_dssp             -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred             ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            35788999999999999999999999888754 66789999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCC-cHHHHH--HHhCcHHHHHHHHhC
Q psy3308         719 KVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGY-TPLHQA--SQQGRVLIIDLLLGA  795 (838)
Q Consensus       719 ~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~l~~A--~~~~~~~~v~~Ll~~  795 (838)
                      +.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|. |||++|  +..|+.+++++|+++
T Consensus        82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~  161 (239)
T 1ycs_B           82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  161 (239)
T ss_dssp             CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999988776 999999  788999999999999


Q ss_pred             CCCCCCCCCc---------cch-HHHHHHcCCccCcc
Q psy3308         796 GAQPNATTNL---------FCC-ATILVKNGAEIDPV  822 (838)
Q Consensus       796 ga~~~~~~~~---------~~~-~~~~~~~~~~~~~~  822 (838)
                      |++++..+..         +++ .+++.+.|..+..+
T Consensus       162 ~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~~i~vl  198 (239)
T 1ycs_B          162 QEKMGIMNKGVIYALWDYEPQNDDELPMKEGDCMTII  198 (239)
T ss_dssp             HHHTTTTGGGEEEESSCBCCSSTTBCCBCSSCEEEEC
T ss_pred             hhcccccccceEEEEeccCCCCCCcccccCCCEEEEE
Confidence            9999887544         455 55566666544333

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.94  E-value=4.8e-27  Score=214.89  Aligned_cols=159  Identities=26%  Similarity=0.388  Sum_probs=119.6

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy3308         605 GKNGVTPLHVASHYDHQNVALLLLDR-GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQ  683 (838)
Q Consensus       605 ~~~~~~~l~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~  683 (838)
                      +..+.+||+.|+..|+.+++++|++. +.+++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus         5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   84 (165)
T 3twr_A            5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS   84 (165)
T ss_dssp             -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence            34456677777777777777777763 55666666667777777777777777777777777777777777788888888


Q ss_pred             cCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy3308         684 EGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENG  763 (838)
Q Consensus       684 ~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g  763 (838)
                      .|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+. |+.+++++|+++|
T Consensus        85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~g  163 (165)
T 3twr_A           85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA  163 (165)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred             cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence            888888888888887777777778888888888888888888888888887788888888887665 7778888887776


Q ss_pred             C
Q psy3308         764 A  764 (838)
Q Consensus       764 ~  764 (838)
                      +
T Consensus       164 A  164 (165)
T 3twr_A          164 A  164 (165)
T ss_dssp             -
T ss_pred             c
Confidence            4

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.94  E-value=3e-26  Score=207.45  Aligned_cols=152  Identities=29%  Similarity=0.409  Sum_probs=122.0

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcH
Q psy3308         609 VTPLHVASHYDHQNVALLLLDR-GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHT  687 (838)
Q Consensus       609 ~~~l~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~  687 (838)
                      .+||+.|+..|+.+++++|++. +.+++..+..|.||||. +..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus         3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~   81 (156)
T 1bd8_A            3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFL   81 (156)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred             chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH
Confidence            4677778888888888777777 34777777778888888 777888888888888888888888888888888888888


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy3308         688 DMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN  762 (838)
Q Consensus       688 ~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~  762 (838)
                      +++++|+++|++++.++..|.||||+|+..|+.+++++|+++ ++++.++..|.|||++|+..|+.+++++|+++
T Consensus        82 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A           82 DTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             HHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence            888888888888888888888888888888888888888877 77888888888888888888888888888764

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.94  E-value=8e-27  Score=204.97  Aligned_cols=134  Identities=23%  Similarity=0.284  Sum_probs=125.2

Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCC-CCc
Q psy3308         664 NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKA-GFT  742 (838)
Q Consensus       664 ~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~-g~t  742 (838)
                      +++++..+..|.|||++|+..|+.+++++|+++|++++.++..|.||||+|+. |+.+++++|+++|++++.++.. |+|
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t   80 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR   80 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence            46778888899999999999999999999999999999999999999999999 9999999999999999999999 999


Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCC
Q psy3308         743 PLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQ  798 (838)
Q Consensus       743 ~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~  798 (838)
                      |||+|+..|+.+++++|+++|++++..|..|.|||++|++.++.+++++|+++|||
T Consensus        81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           81 PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999999986

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.94  E-value=8.4e-28  Score=234.24  Aligned_cols=190  Identities=16%  Similarity=0.220  Sum_probs=140.5

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q psy3308         606 KNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEG  685 (838)
Q Consensus       606 ~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g  685 (838)
                      ..|.|||+.|+..++.++++.|+++|++++.. ..+.||||.|+..|+.+++++|++.|++++.++..|.||||+|+..|
T Consensus         3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g   81 (239)
T 1ycs_B            3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG   81 (239)
T ss_dssp             -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred             ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            45789999999999999999999999998854 67889999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCC-cHHHHH--HHcCCHHHHHHHHHC
Q psy3308         686 HTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGF-TPLHIA--SHFGQLNMVRYLVEN  762 (838)
Q Consensus       686 ~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~-t~l~~A--~~~g~~~~v~~Ll~~  762 (838)
                      +.++|++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|. ||||+|  +..|+.+++++|+++
T Consensus        82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~  161 (239)
T 1ycs_B           82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  161 (239)
T ss_dssp             CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999988877 999999  788999999999999


Q ss_pred             CCCCccC---------CCCCCcHHHHHHHhCcHHHHHHHHhCCCC
Q psy3308         763 GANVNAT---------TNLGYTPLHQASQQGRVLIIDLLLGAGAQ  798 (838)
Q Consensus       763 g~~~~~~---------~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~  798 (838)
                      |++++..         +..+.+++++|++.|.  ++++|.+.+.+
T Consensus       162 ~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~~~~~  204 (239)
T 1ycs_B          162 QEKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHREDED  204 (239)
T ss_dssp             HHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCCCTTS
T ss_pred             hhcccccccceEEEEeccCCCCCCcccccCCC--EEEEEEecCCC
Confidence            9888776         5568899988888876  56666665554

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.93  E-value=2.3e-26  Score=207.51  Aligned_cols=140  Identities=21%  Similarity=0.278  Sum_probs=110.1

Q ss_pred             CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCc-HHHH
Q psy3308         668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFT-PLHI  746 (838)
Q Consensus       668 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t-~l~~  746 (838)
                      +..+..|.|||++|+..|+.++|++|+++|++++..+..|.||||+|+ .|+.+++++|+++|++++.++..|+| |||+
T Consensus         6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~   84 (156)
T 1bi7_B            6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD   84 (156)
T ss_dssp             ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred             cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence            345567788888888888888888888888888888888888888874 88888889888888888888888888 9999


Q ss_pred             HHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch
Q psy3308         747 ASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC  808 (838)
Q Consensus       747 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~  808 (838)
                      |+..|+.+++++|+++|++++.+|..|.||||+|++.|+.+++++|+++|++++.+|..|.|
T Consensus        85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  146 (156)
T 1bi7_B           85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARID  146 (156)
T ss_dssp             HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------
T ss_pred             HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCc
Confidence            99999999999999999999999888999999999999999999999999999998888887

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.93  E-value=9.1e-27  Score=214.93  Aligned_cols=161  Identities=16%  Similarity=0.161  Sum_probs=131.6

Q ss_pred             CChHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCcH----HHHHHHHhCCCCCCCCCCCCCcHhHHHH
Q psy3308         641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAES-KAGFTPLHLSAQEGHT----DMSSLLIEHGATVSHQAKNGLTPLHLCA  715 (838)
Q Consensus       641 ~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~-~~g~t~L~~A~~~g~~----~iv~~Ll~~g~~~~~~~~~~~t~l~~A~  715 (838)
                      +.++|+.|++.|+++.++.+++.+.  +..+ ..|+||||+|+..|+.    +++++|+++|+++|.++..|.||||+|+
T Consensus         6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~   83 (186)
T 3t8k_A            6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF   83 (186)
T ss_dssp             HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred             cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence            3467888888888888888887654  3344 5678888888888764    5888888888888888888888888888


Q ss_pred             hcCC------HHHHHHHHhCCCCCCCCCCCCC-cHHHHHHHcC-----CHHHHHHHHH-CCCCCccCCCCCCcHHHHHHH
Q psy3308         716 QEDK------VNVATITMFNGAEIDPVTKAGF-TPLHIASHFG-----QLNMVRYLVE-NGANVNATTNLGYTPLHQASQ  782 (838)
Q Consensus       716 ~~g~------~~i~~~L~~~~~~~~~~~~~g~-t~l~~A~~~g-----~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~  782 (838)
                      ..|+      .+++++|+++|+++|.+|..|+ ||||+|+..+     +.+++++|++ +|++++.+|..|+||||+|++
T Consensus        84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~  163 (186)
T 3t8k_A           84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR  163 (186)
T ss_dssp             HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHT
T ss_pred             HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHH
Confidence            8876      5788889999999998888888 8999888854     4579999999 899999999999999999999


Q ss_pred             hCcHHHHHHHHhCCCCCCCCC
Q psy3308         783 QGRVLIIDLLLGAGAQPNATT  803 (838)
Q Consensus       783 ~~~~~~v~~Ll~~ga~~~~~~  803 (838)
                      .|+.++|++|.+...+.+.++
T Consensus       164 ~~~~~~v~~L~~~~~~~~~~~  184 (186)
T 3t8k_A          164 CQKPIALKMMEDYIKKYNLKE  184 (186)
T ss_dssp             TTCHHHHHHHHHHHHHHTCCC
T ss_pred             cCCHHHHHHHHHHHHHHhccc
Confidence            999999999998766555544

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.93  E-value=1.7e-25  Score=196.45  Aligned_cols=134  Identities=25%  Similarity=0.374  Sum_probs=120.6

Q ss_pred             CCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCC-CCc
Q psy3308         631 GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN-GLT  709 (838)
Q Consensus       631 g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~-~~t  709 (838)
                      +++++..+..|.||||.|+..|+.+++++|+++|++++.++..|+||||+|+. |+.+++++|+++|++++.++.. |.|
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t   80 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR   80 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence            45777888888999999999999999999999999999888889999999999 9999999999999999988888 899


Q ss_pred             HhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy3308         710 PLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN  765 (838)
Q Consensus       710 ~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~  765 (838)
                      |||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++|+|
T Consensus        81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           81 PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999998875

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.92  E-value=1.1e-25  Score=203.18  Aligned_cols=144  Identities=24%  Similarity=0.345  Sum_probs=114.9

Q ss_pred             ccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCc-HhHHH
Q psy3308         636 AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLT-PLHLC  714 (838)
Q Consensus       636 ~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t-~l~~A  714 (838)
                      ..+..|.||||.|+..|+.+++++|+++|++++..+..|+||||+|+ .|+.+++++|+++|++++.++..|.| |||+|
T Consensus         7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A   85 (156)
T 1bi7_B            7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA   85 (156)
T ss_dssp             ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred             CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence            44567889999999999999999999999999999999999999985 89999999999999999999999998 99999


Q ss_pred             HhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHH
Q psy3308         715 AQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQA  780 (838)
Q Consensus       715 ~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A  780 (838)
                      +..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++..+..|.||.+.+
T Consensus        86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~  151 (156)
T 1bi7_B           86 AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP  151 (156)
T ss_dssp             HHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred             HHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence            999999999999999999999999999999999999999999999999999999999999888744

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.92  E-value=1.6e-24  Score=188.20  Aligned_cols=126  Identities=45%  Similarity=0.740  Sum_probs=115.7

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy3308         673 AGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQ  752 (838)
Q Consensus       673 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~  752 (838)
                      +|+|||+.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~   80 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH   80 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence            37889999999999999999999988888888889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCC
Q psy3308         753 LNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQ  798 (838)
Q Consensus       753 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~  798 (838)
                      .+++++|+++|++++..|..|.|||++|++.|+.+++++|+++|||
T Consensus        81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999999999986

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.92  E-value=1.7e-24  Score=190.08  Aligned_cols=126  Identities=29%  Similarity=0.503  Sum_probs=110.4

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy3308         671 SKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHF  750 (838)
Q Consensus       671 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~  750 (838)
                      ...+.|||++|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus        11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~   90 (136)
T 2jab_A           11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI   90 (136)
T ss_dssp             -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred             cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence            34467888888888888888888888888888888888888888888888888888888888888888899999999999


Q ss_pred             CCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCC
Q psy3308         751 GQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG  796 (838)
Q Consensus       751 g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g  796 (838)
                      |+.+++++|+++|++++..|..|.|||++|++.|+.+++++|+++|
T Consensus        91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            9999999999999999999999999999999999999999999876

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.91  E-value=3.3e-25  Score=204.51  Aligned_cols=160  Identities=16%  Similarity=0.125  Sum_probs=132.4

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCccC-CCCChHHHHHHHcCcH----HHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy3308         609 VTPLHVASHYDHQNVALLLLDRGASPHAVA-KNGYTPLHIAAKKNQM----DIATTLLEYNAKPNAESKAGFTPLHLSAQ  683 (838)
Q Consensus       609 ~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~~~t~L~~A~~~~~~----~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~  683 (838)
                      .++|+.|+..|+.+.++.++..+.  +..+ ..|+||||+|+..|+.    +++++|+++|++++.++..|+||||+|+.
T Consensus         7 ~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~   84 (186)
T 3t8k_A            7 YRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQ   84 (186)
T ss_dssp             CSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHH
T ss_pred             ccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence            457788888888888887777654  3344 5688888888888864    58888999999998888888999999888


Q ss_pred             cCc------HHHHHHHHhCCCCCCCCCCCCC-cHhHHHHhcC-----CHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHc
Q psy3308         684 EGH------TDMSSLLIEHGATVSHQAKNGL-TPLHLCAQED-----KVNVATITMF-NGAEIDPVTKAGFTPLHIASHF  750 (838)
Q Consensus       684 ~g~------~~iv~~Ll~~g~~~~~~~~~~~-t~l~~A~~~g-----~~~i~~~L~~-~~~~~~~~~~~g~t~l~~A~~~  750 (838)
                      .|+      .+++++|+++|+++|.++..|. ||||+|+..+     +.+++++|++ +|++++.+|..|+||||+|+..
T Consensus        85 ~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~  164 (186)
T 3t8k_A           85 GGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRC  164 (186)
T ss_dssp             HCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTT
T ss_pred             cCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHc
Confidence            876      6789999999999999999999 9999999844     4568999999 9999999999999999999999


Q ss_pred             CCHHHHHHHHHCCCCCccCC
Q psy3308         751 GQLNMVRYLVENGANVNATT  770 (838)
Q Consensus       751 g~~~~v~~Ll~~g~~~~~~~  770 (838)
                      |+.++|++|.++....+.++
T Consensus       165 ~~~~~v~~L~~~~~~~~~~~  184 (186)
T 3t8k_A          165 QKPIALKMMEDYIKKYNLKE  184 (186)
T ss_dssp             TCHHHHHHHHHHHHHHTCCC
T ss_pred             CCHHHHHHHHHHHHHHhccc
Confidence            99999999988755555544

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.91  E-value=1.6e-24  Score=190.77  Aligned_cols=135  Identities=21%  Similarity=0.353  Sum_probs=114.1

Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q psy3308         664 NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTP  743 (838)
Q Consensus       664 ~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~  743 (838)
                      |+|+ .++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|+||
T Consensus         1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~   79 (137)
T 3c5r_A            1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP   79 (137)
T ss_dssp             ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred             CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence            4566 677888899999999999999999999999888888889999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCC
Q psy3308         744 LHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP  799 (838)
Q Consensus       744 l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~  799 (838)
                      ||+|+..|+.+++++|+++|++++..|..|.|||++|+..+..+++++|.+++..+
T Consensus        80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s~  135 (137)
T 3c5r_A           80 LHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSS  135 (137)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-------
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccCC
Confidence            99999999999999999999999999999999999999999999999888876543

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.90  E-value=2.8e-23  Score=180.34  Aligned_cols=126  Identities=44%  Similarity=0.732  Sum_probs=115.7

Q ss_pred             CCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCC
Q psy3308         640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDK  719 (838)
Q Consensus       640 ~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~  719 (838)
                      +|.||||.|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~   80 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH   80 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence            47899999999999999999999999998888899999999999999999999999999999899999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy3308         720 VNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN  765 (838)
Q Consensus       720 ~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~  765 (838)
                      .+++++|+++|++++.++..|.|||++|+..|+.+++++|+++|++
T Consensus        81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999999998875

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.90  E-value=2.7e-23  Score=182.34  Aligned_cols=125  Identities=29%  Similarity=0.406  Sum_probs=109.4

Q ss_pred             CCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcC
Q psy3308         639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQED  718 (838)
Q Consensus       639 ~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g  718 (838)
                      ..+.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus        12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~   91 (136)
T 2jab_A           12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIG   91 (136)
T ss_dssp             CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence            34668888888888888888888888888888888888999988888889999888888888888888889999999999


Q ss_pred             CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy3308         719 KVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENG  763 (838)
Q Consensus       719 ~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g  763 (838)
                      +.+++++|+++|++++..|..|+|||++|+..|+.+++++|+++|
T Consensus        92 ~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           92 HLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             CHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            999999999888888888888999999999999999999998875

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.89  E-value=2.6e-23  Score=182.97  Aligned_cols=132  Identities=27%  Similarity=0.404  Sum_probs=116.8

Q ss_pred             CCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcH
Q psy3308          85 GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTP  164 (838)
Q Consensus        85 ~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~ta  164 (838)
                      |+|+ .+|..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||
T Consensus         1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~   79 (137)
T 3c5r_A            1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP   79 (137)
T ss_dssp             ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred             CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence            5666 678899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCC
Q psy3308         165 LHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHG  217 (838)
Q Consensus       165 l~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~  217 (838)
                      ||+|+..|+.+++++|++.|++++..+..|.||+++|+..++.+++++|.+++
T Consensus        80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~  132 (137)
T 3c5r_A           80 LHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE  132 (137)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence            99999999999999999999999889999999999999989888888887654

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.88  E-value=6.7e-24  Score=197.10  Aligned_cols=140  Identities=25%  Similarity=0.324  Sum_probs=128.6

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccc-CCCCcHHHHHHH
Q psy3308          92 SLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKT-RDGLTPLHCAAR  170 (838)
Q Consensus        92 ~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~-~~~~tal~~A~~  170 (838)
                      +..|.||||+|+..|+.++|++|++ +++++..+..|.||||+|+..|+.++|++|+++|++++..+ ..|.||||+|+.
T Consensus        41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~  119 (183)
T 3deo_A           41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG  119 (183)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence            3567899999999999999999999 99999999999999999999999999999999999999888 889999999999


Q ss_pred             cCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHHHC
Q psy3308         171 SGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR  249 (838)
Q Consensus       171 ~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~~~  249 (838)
                      .|+.+++++|+++|++++..+..|.|||++|+..++.                 ....++|++|+..|+.+++++|.++
T Consensus       120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~  181 (183)
T 3deo_A          120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ  181 (183)
T ss_dssp             TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred             cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence            9999999999999999999999999999999874322                 2345899999999999999999865

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.88  E-value=1.8e-22  Score=187.43  Aligned_cols=140  Identities=28%  Similarity=0.353  Sum_probs=122.9

Q ss_pred             CCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCcHhHHHHh
Q psy3308         638 AKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA-KNGLTPLHLCAQ  716 (838)
Q Consensus       638 ~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~t~l~~A~~  716 (838)
                      +..|.||||.|+..|+.+++++|++ |.+++..+..|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+.
T Consensus        41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~  119 (183)
T 3deo_A           41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG  119 (183)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence            3467789999999999999999999 88999999999999999999999999999999999998887 889999999999


Q ss_pred             cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         717 EDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       717 ~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      .|+.+++++|+++|++++.+|..|+|||++|+..++.                 ..+.+||++|++.|+.+++++|.++
T Consensus       120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~  181 (183)
T 3deo_A          120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ  181 (183)
T ss_dssp             TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred             cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence            9999999999999999999999999999999874422                 3457899999999999999999875

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.88  E-value=1.1e-22  Score=198.10  Aligned_cols=142  Identities=28%  Similarity=0.347  Sum_probs=127.5

Q ss_pred             CCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCcHhHHHHhc
Q psy3308         639 KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA-KNGLTPLHLCAQE  717 (838)
Q Consensus       639 ~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~t~l~~A~~~  717 (838)
                      ..|.||||.|+..|+.+++++|++ |++++.++..|+||||+|+..|+.++|++|+++|++++.++ ..|.||||+|+..
T Consensus        43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~  121 (244)
T 3ui2_A           43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY  121 (244)
T ss_dssp             HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred             cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence            457899999999999999999999 99999999999999999999999999999999999998888 7899999999999


Q ss_pred             CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCC
Q psy3308         718 DKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA  797 (838)
Q Consensus       718 g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga  797 (838)
                      |+.+++++|+++|++++.+|..|+||||+|+..++                 ...+.|||++|++.|+.+++++|++++.
T Consensus       122 g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~~~~  184 (244)
T 3ui2_A          122 VRPEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEGQVF  184 (244)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence            99999999999999999999999999999986322                 2457899999999999999999998755


Q ss_pred             C
Q psy3308         798 Q  798 (838)
Q Consensus       798 ~  798 (838)
                      +
T Consensus       185 ~  185 (244)
T 3ui2_A          185 E  185 (244)
T ss_dssp             E
T ss_pred             c
Confidence            4

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.87  E-value=6.8e-23  Score=197.46  Aligned_cols=136  Identities=18%  Similarity=0.210  Sum_probs=106.2

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHH
Q psy3308         671 SKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN-GAEIDPVTKAGFTPLHIASH  749 (838)
Q Consensus       671 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~-~~~~~~~~~~g~t~l~~A~~  749 (838)
                      +..|.||||+|+..|+.++|++|++.|++++.++..|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+.
T Consensus        70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~  149 (222)
T 3ehr_A           70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW  149 (222)
T ss_dssp             EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred             ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence            44567888888888888888888888888888888888888888888888888888888 88888899999999999999


Q ss_pred             cCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCcc
Q psy3308         750 FGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLF  806 (838)
Q Consensus       750 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~  806 (838)
                      .|+.+++++|+++|++++..|..|.|||++|+..++.++++.|+++|++.+.+|..+
T Consensus       150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~  206 (222)
T 3ehr_A          150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED  206 (222)
T ss_dssp             HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred             cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence            999999999999999999999999999999999999999999999999888777554

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.87  E-value=2.3e-22  Score=173.01  Aligned_cols=115  Identities=22%  Similarity=0.325  Sum_probs=84.0

Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Q psy3308         672 KAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG  751 (838)
Q Consensus       672 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g  751 (838)
                      ..|.|||++|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus         5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~   84 (123)
T 3aaa_C            5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG   84 (123)
T ss_dssp             --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred             cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence            34567777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             CHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcH
Q psy3308         752 QLNMVRYLVENGANVNATTNLGYTPLHQASQQGRV  786 (838)
Q Consensus       752 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~  786 (838)
                      +.+++++|+++|++++..|..|.|||++|...+..
T Consensus        85 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~  119 (123)
T 3aaa_C           85 HVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIK  119 (123)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHH
T ss_pred             CHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHH
Confidence            77777777777777777777777777777443333

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.87  E-value=7.2e-22  Score=197.92  Aligned_cols=137  Identities=19%  Similarity=0.164  Sum_probs=69.9

Q ss_pred             hHHHHHHHcCcHHHHHHHHhCCCCCCC------CCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCCCCCCCCCCcHhHH
Q psy3308         643 TPLHIAAKKNQMDIATTLLEYNAKPNA------ESKAGFTPLHLSAQE---GHTDMSSLLIEHGATVSHQAKNGLTPLHL  713 (838)
Q Consensus       643 t~L~~A~~~~~~~iv~~Ll~~~~~~~~------~~~~g~t~L~~A~~~---g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~  713 (838)
                      ++|+.|+..|+++.++.|++.|++++.      .+..|.||||+|+..   |+.+++++|+++|++++.++..|.||||+
T Consensus       153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~  232 (301)
T 2b0o_E          153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY  232 (301)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHH
T ss_pred             HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence            455666666666666666655555554      344555555555554   45555555555555555555555555555


Q ss_pred             HHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCc
Q psy3308         714 CAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGR  785 (838)
Q Consensus       714 A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~  785 (838)
                      |+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++|++      .|.||||+|++.|+
T Consensus       233 A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~  298 (301)
T 2b0o_E          233 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVI  298 (301)
T ss_dssp             HHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC-------
T ss_pred             HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCC
Confidence            5555555555555555555555555555555555555555555555554443      24455555554443

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.86  E-value=5.6e-22  Score=198.71  Aligned_cols=139  Identities=19%  Similarity=0.160  Sum_probs=125.3

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCCCCC------CCCCCCcHhHHHHhc---CCHHHHHHHHhCCCCCCCCCCCCCcHH
Q psy3308         674 GFTPLHLSAQEGHTDMSSLLIEHGATVSH------QAKNGLTPLHLCAQE---DKVNVATITMFNGAEIDPVTKAGFTPL  744 (838)
Q Consensus       674 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~------~~~~~~t~l~~A~~~---g~~~i~~~L~~~~~~~~~~~~~g~t~l  744 (838)
                      ..++|+.|+..|+.+.|++|++.|++++.      .+..|.||||+|+..   |+.+++++|+++|++++.+|..|+|||
T Consensus       151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL  230 (301)
T 2b0o_E          151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL  230 (301)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred             hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence            34789999999999999999999999998      688999999999997   899999999999999999999999999


Q ss_pred             HHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHHcCCc
Q psy3308         745 HIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVKNGAE  818 (838)
Q Consensus       745 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~~~~~  818 (838)
                      |+|+..|+.++|++|+++|++++.+|..|.|||++|+..|+.+++++|+++|++      .|.| +++|+++|+.
T Consensus       231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~  299 (301)
T 2b0o_E          231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS  299 (301)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence            999999999999999999999999999999999999999999999999999986      5778 9999999875

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.86  E-value=3e-21  Score=191.15  Aligned_cols=126  Identities=18%  Similarity=0.188  Sum_probs=107.7

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCC------CCCCCCCCcHhHHHHhc---CCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy3308         676 TPLHLSAQEGHTDMSSLLIEHGATV------SHQAKNGLTPLHLCAQE---DKVNVATITMFNGAEIDPVTKAGFTPLHI  746 (838)
Q Consensus       676 t~L~~A~~~g~~~iv~~Ll~~g~~~------~~~~~~~~t~l~~A~~~---g~~~i~~~L~~~~~~~~~~~~~g~t~l~~  746 (838)
                      ++|+.|+..|+.+.++.+++.|+++      +..+..|.||||+|+..   |+.+++++|+++|+++|.+|..|+||||+
T Consensus       132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~  211 (278)
T 1dcq_A          132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY  211 (278)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred             hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHH
Confidence            5677777777777777777777773      34467788999999988   88899999999999999999999999999


Q ss_pred             HHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCC
Q psy3308         747 ASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA  801 (838)
Q Consensus       747 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~  801 (838)
                      |+..|+.++|++|+++|++++.+|..|.||||+|++.|+.+++++|+++|++...
T Consensus       212 A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~  266 (278)
T 1dcq_A          212 CCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFN  266 (278)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCC
T ss_pred             HHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence            9999999999999999999999999999999999999999999999999886543

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.86  E-value=1.5e-21  Score=167.86  Aligned_cols=118  Identities=26%  Similarity=0.377  Sum_probs=103.1

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHc
Q psy3308          92 SLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARS  171 (838)
Q Consensus        92 ~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~  171 (838)
                      +..|.||||+|+..|+.++|++|++++.+++..+..|.||||+||..|+.++|++|+++|++++..+..|.||||+|+..
T Consensus         4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~   83 (123)
T 3aaa_C            4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE   83 (123)
T ss_dssp             ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHH
Q psy3308         172 GHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAA  209 (838)
Q Consensus       172 g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~  209 (838)
                      |+.++|++|+++|++++..+..|.||+++|...+..++
T Consensus        84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l  121 (123)
T 3aaa_C           84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL  121 (123)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence            99999999999999988888899999998855444444

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.85  E-value=2.3e-21  Score=188.91  Aligned_cols=140  Identities=24%  Similarity=0.275  Sum_probs=110.6

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcC
Q psy3308         607 NGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAES-KAGFTPLHLSAQEG  685 (838)
Q Consensus       607 ~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~-~~g~t~L~~A~~~g  685 (838)
                      .|.||||.|+..|+.+++++|++ |++++..+..|.||||+|+..|+.++|++|+++|++++..+ ..|+||||+|+..|
T Consensus        44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g  122 (244)
T 3ui2_A           44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV  122 (244)
T ss_dssp             HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTT
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC
Confidence            45678888888888888888887 77788777788888888888888888888888888887777 66888888888888


Q ss_pred             cHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q psy3308         686 HTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA  764 (838)
Q Consensus       686 ~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~  764 (838)
                      +.++|++|+++|++++.++..|.||||+|+..+                 ....+.|||++|+..|+.+++++|++++.
T Consensus       123 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~-----------------~~~~~~~~l~~a~~~g~~~iv~~L~~~~~  184 (244)
T 3ui2_A          123 RPEVVEALVELGADIEVEDERGLTALELAREIL-----------------KTTPKGNPMQFGRRIGLEKVINVLEGQVF  184 (244)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH-----------------TTCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH-----------------hccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence            888888888888888888888888888887532                 12456788888888888888888888643

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.85  E-value=5.9e-21  Score=154.43  Aligned_cols=93  Identities=44%  Similarity=0.722  Sum_probs=83.3

Q ss_pred             CCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCc
Q psy3308         706 NGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGR  785 (838)
Q Consensus       706 ~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~  785 (838)
                      +|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|++.|+
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~   80 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH   80 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence            37788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCC
Q psy3308         786 VLIIDLLLGAGAQ  798 (838)
Q Consensus       786 ~~~v~~Ll~~ga~  798 (838)
                      .+++++|+++||+
T Consensus        81 ~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           81 LEVVKLLLEAGAY   93 (93)
T ss_dssp             HHHHHHHHHTTCC
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999999885

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.85  E-value=1e-21  Score=189.26  Aligned_cols=136  Identities=22%  Similarity=0.258  Sum_probs=107.7

Q ss_pred             CCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHhHHHHh
Q psy3308         638 AKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH-GATVSHQAKNGLTPLHLCAQ  716 (838)
Q Consensus       638 ~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~A~~  716 (838)
                      +..|.||||.|+..|+.+++++|++.|++++.++..|+||||+|+..|+.++|++|+++ |++++.++..|.||||+|+.
T Consensus        70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~  149 (222)
T 3ehr_A           70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW  149 (222)
T ss_dssp             EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred             ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence            45678899999999999999999999988888888899999999999999999999988 88898888899999999999


Q ss_pred             cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCC
Q psy3308         717 EDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLG  773 (838)
Q Consensus       717 ~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g  773 (838)
                      .|+.+++++|+++|++++.++..|+|||++|+..|+.++++.|++.|+..+..+.+|
T Consensus       150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~  206 (222)
T 3ehr_A          150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED  206 (222)
T ss_dssp             HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred             cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence            999999999999999999999999999999999999999999999888877766544

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.83  E-value=4.4e-20  Score=182.77  Aligned_cols=192  Identities=19%  Similarity=0.195  Sum_probs=147.4

Q ss_pred             cCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCC-CCccCCCCChHHHHH
Q psy3308         571 TTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG-KNGVTPLHVASHYDHQNVALLLLDRGAS-PHAVAKNGYTPLHIA  648 (838)
Q Consensus       571 ~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~-~~~~~~l~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~~t~L~~A  648 (838)
                      .|.++.+.++.+...|+..+.+++...-....... ..+....    .....-..+|+...... .........++|+.|
T Consensus        62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~----~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a  137 (278)
T 1dcq_A           62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMI----ARKDYITAKYMERRYARKKHADTAAKLHSLCEA  137 (278)
T ss_dssp             TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHH----HHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHH----HHHHHHHHHHHHhhcccccccccchhhhhhhhH
Confidence            46677889999999999888777654322111101 1111111    11111122333322111 111112234789999


Q ss_pred             HHcCcHHHHHHHHhCCCCCC------CCCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCC
Q psy3308         649 AKKNQMDIATTLLEYNAKPN------AESKAGFTPLHLSAQE---GHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDK  719 (838)
Q Consensus       649 ~~~~~~~iv~~Ll~~~~~~~------~~~~~g~t~L~~A~~~---g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~  719 (838)
                      +..|+.+.++.+++.|.+++      ..+..|.||||+|+..   |+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus       138 ~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~  217 (278)
T 1dcq_A          138 VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN  217 (278)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTC
T ss_pred             hhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCC
Confidence            99999999999999999844      4478899999999999   89999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy3308         720 VNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV  766 (838)
Q Consensus       720 ~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~  766 (838)
                      .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus       218 ~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~  264 (278)
T 1dcq_A          218 AECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR  264 (278)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            99999999999999999999999999999999999999999998863

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.83  E-value=1.9e-20  Score=191.27  Aligned_cols=121  Identities=21%  Similarity=0.252  Sum_probs=61.0

Q ss_pred             ChHHHHHHHc-CcHHHHHHHHhCCCCCCCCC--CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcC
Q psy3308         642 YTPLHIAAKK-NQMDIATTLLEYNAKPNAES--KAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQED  718 (838)
Q Consensus       642 ~t~L~~A~~~-~~~~iv~~Ll~~~~~~~~~~--~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g  718 (838)
                      .|+||.|+.. |+++++++|++.|++++..+  ..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|
T Consensus       200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g  279 (368)
T 3jue_A          200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILG  279 (368)
T ss_dssp             HHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred             CcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence            3455555555 55555555555555555444  44455555555555555555555555555544444445555444444


Q ss_pred             CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy3308         719 KVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN  762 (838)
Q Consensus       719 ~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~  762 (838)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.
T Consensus       280 ~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~  323 (368)
T 3jue_A          280 HTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLA  323 (368)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             cHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence            44444444444444444444444444444444444444444443

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.82  E-value=5.9e-20  Score=148.52  Aligned_cols=93  Identities=44%  Similarity=0.717  Sum_probs=80.4

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCC
Q psy3308          94 NGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGH  173 (838)
Q Consensus        94 ~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~  173 (838)
                      +|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.++|++|+++|++++.++..|.|||++|+..|+
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~   80 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH   80 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence            36788999999999999999999888888888888899999999999999999999888888888888899999999899


Q ss_pred             HHHHHHHHHcCCC
Q psy3308         174 DNVIDILIEKGAA  186 (838)
Q Consensus       174 ~~iv~~L~~~~~~  186 (838)
                      .+++++|++.|++
T Consensus        81 ~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           81 LEVVKLLLEAGAY   93 (93)
T ss_dssp             HHHHHHHHHTTCC
T ss_pred             HHHHHHHHHcCCC
Confidence            9999988888753

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.82  E-value=5.5e-20  Score=187.92  Aligned_cols=144  Identities=22%  Similarity=0.234  Sum_probs=100.8

Q ss_pred             CCCCcHHHHHHHc-CcHHHHHHHHhCCCCCCCCC--CCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy3308         672 KAGFTPLHLSAQE-GHTDMSSLLIEHGATVSHQA--KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS  748 (838)
Q Consensus       672 ~~g~t~L~~A~~~-g~~~iv~~Ll~~g~~~~~~~--~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~  748 (838)
                      ..+.|+|+.|+.. |+.++|++|+++|++++..+  ..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus       197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~  276 (368)
T 3jue_A          197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHAT  276 (368)
T ss_dssp             CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence            3455788888887 88888888888888888777  67888888888888888888888888888888888888888888


Q ss_pred             HcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCC---CCCCCCCCccch-HHHHHHc
Q psy3308         749 HFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG---AQPNATTNLFCC-ATILVKN  815 (838)
Q Consensus       749 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~~~~-~~~~~~~  815 (838)
                      ..|+.+++++|+++|++++..|..|.|||++|+..|+.+++++|++.|   ++....+..+.| +.++...
T Consensus       277 ~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~  347 (368)
T 3jue_A          277 ILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF  347 (368)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred             HcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence            888888888888888888888888888888888888888888888654   333344555556 5555443

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.81  E-value=2.9e-20  Score=157.65  Aligned_cols=106  Identities=35%  Similarity=0.494  Sum_probs=62.0

Q ss_pred             CCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHH
Q psy3308         703 QAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQ  782 (838)
Q Consensus       703 ~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~  782 (838)
                      ++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.|||++|++
T Consensus         5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~   84 (115)
T 2l6b_A            5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK   84 (115)
T ss_dssp             CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence            34455555555555555555555555555555555555666666666666666666666666666665556666666666


Q ss_pred             hCcHHHHHHHHhCCCCCCCCCCccch
Q psy3308         783 QGRVLIIDLLLGAGAQPNATTNLFCC  808 (838)
Q Consensus       783 ~~~~~~v~~Ll~~ga~~~~~~~~~~~  808 (838)
                      .|+.+++++|+++|++++.++..|.+
T Consensus        85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~  110 (115)
T 2l6b_A           85 NGHHEIVKLLDAKGADVNARSWGSSH  110 (115)
T ss_dssp             TTCHHHHHHHHTTSSSHHHHSCCCC-
T ss_pred             CCCHHHHHHHHHcCCCCCcCCccccc
Confidence            66666666666666666555555543

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.80  E-value=1.1e-19  Score=153.92  Aligned_cols=109  Identities=35%  Similarity=0.530  Sum_probs=96.3

Q ss_pred             CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy3308         669 AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS  748 (838)
Q Consensus       669 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~  748 (838)
                      .+|..|+|||++|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~   83 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK   83 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence            45778889999999999999999999999999888889999999999999999999999999999999999999999999


Q ss_pred             HcCCHHHHHHHHHCCCCCccCCCCCCcHH
Q psy3308         749 HFGQLNMVRYLVENGANVNATTNLGYTPL  777 (838)
Q Consensus       749 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l  777 (838)
                      ..|+.+++++|+++|+++|..+..|.+|-
T Consensus        84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~  112 (115)
T 2l6b_A           84 KNGHHEIVKLLDAKGADVNARSWGSSHHH  112 (115)
T ss_dssp             TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred             HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence            99999999999999999999988888763

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.71  E-value=3.4e-17  Score=136.73  Aligned_cols=92  Identities=32%  Similarity=0.456  Sum_probs=80.7

Q ss_pred             CCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHH
Q psy3308         701 SHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQA  780 (838)
Q Consensus       701 ~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A  780 (838)
                      ...+..|.|+||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|+|||++|
T Consensus        18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A   97 (110)
T 2zgd_A           18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS   97 (110)
T ss_dssp             ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence            34567788999999999999999999999999998999999999999999999999999999999999999999999999


Q ss_pred             HHhCcHHHHHHH
Q psy3308         781 SQQGRVLIIDLL  792 (838)
Q Consensus       781 ~~~~~~~~v~~L  792 (838)
                      ++.|+.+++++|
T Consensus        98 ~~~~~~~~~~~L  109 (110)
T 2zgd_A           98 IDNGNEDLAEIL  109 (110)
T ss_dssp             HHHTCHHHHHHH
T ss_pred             HHcCCHHHHHHh
Confidence            999999999887

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.70  E-value=5.1e-17  Score=135.71  Aligned_cols=92  Identities=27%  Similarity=0.456  Sum_probs=83.3

Q ss_pred             ccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHH
Q psy3308          89 NVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCA  168 (838)
Q Consensus        89 ~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A  168 (838)
                      ...+.+|.|+||+|+..|+.++|++|+++|++++..+..|.||||+||..|+.++|++|+++|++++..+..|.|||++|
T Consensus        18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A   97 (110)
T 2zgd_A           18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS   97 (110)
T ss_dssp             ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence            45677889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCHHHHHHH
Q psy3308         169 ARSGHDNVIDIL  180 (838)
Q Consensus       169 ~~~g~~~iv~~L  180 (838)
                      +..|+.+++++|
T Consensus        98 ~~~~~~~~~~~L  109 (110)
T 2zgd_A           98 IDNGNEDLAEIL  109 (110)
T ss_dssp             HHHTCHHHHHHH
T ss_pred             HHcCCHHHHHHh
Confidence            999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	838
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	5e-83
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-82
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-82
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	8e-78
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	8e-77
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-66
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	6e-57
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-52
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	7e-42
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	5e-37
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-19
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-04
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	7e-43
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-41
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	7e-40
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-38
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-38
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-36
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-22
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-20
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-19
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-19
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-04
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-38
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	6e-38
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	6e-35
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-34
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-34
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-34
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	5e-31
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-28
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	7e-17
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-13
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-35
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-33
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-33
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-31
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-31
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-30
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-30
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-29
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-20
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-07
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	9e-34
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-31
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-30
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	3e-30
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	7e-25
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	7e-23
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-21
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-21
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	5e-33
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	3e-31
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	3e-30
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	4e-29
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	9e-29
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	8e-28
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	6e-26
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	7e-25
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	8e-17
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-10
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	4e-08
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-32
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	9e-32
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-31
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	9e-31
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	3e-29
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-25
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-24
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-16
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	7e-15
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	5e-14
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	9e-27
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	3e-26
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	9e-26
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-25
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-24
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	5e-16
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	4e-13
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	3e-04
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-26
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-25
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-24
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-23
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	4e-23
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	6e-20
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-19
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	4e-18
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-14
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	3e-13
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	5e-06
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-25
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-22
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-21
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-20
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	9e-20
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-18
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-18
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-18
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-17
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-23
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	8e-23
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-21
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	6e-21
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-20
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	4e-19
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	9e-18
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	9e-17
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	1e-16
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	1e-14
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	5e-22
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	5e-21
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	3e-20
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	6e-20
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	9e-20
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	7e-19
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-18
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-16
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-14
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	6e-12
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	9e-11
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-04
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	3e-17
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-16
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-14
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	4e-14
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	7e-14
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	3e-13
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	9e-13
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	3e-11
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	1e-09
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-09
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	4e-14
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	5e-14
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	8e-14
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	3e-13
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	6e-13
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	7e-12
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	8e-12
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	1e-11
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-11
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	7e-10
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	5e-09
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	3e-06
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	3e-05
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	5e-14
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-11
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-11
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	3e-11
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	4e-10
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	3e-09
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	5e-08
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-07
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	4e-07
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	4e-07
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	5e-06
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	1e-05
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	4e-05
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	3e-13
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	8e-11
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	3e-10
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	3e-10
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	3e-09
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	3e-09
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	3e-09
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	5e-09
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	1e-08
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	7e-08
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	2e-07
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	3e-06
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	7e-04
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	0.001
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	2e-12
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	3e-12
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	3e-11
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	4e-11
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	5e-11
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	1e-09
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	3e-09
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	1e-07
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	1e-07
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	1e-07
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	2e-07
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	2e-09
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	1e-08
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	1e-08
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	2e-08
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	3e-08
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	9e-08
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	2e-07
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	3e-06
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	9e-06
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	3e-05
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	4e-05
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	5e-05
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	2e-04
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	4e-04
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	3e-07
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	4e-07
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	7e-07
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	1e-06
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	2e-06
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	6e-06
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	2e-04
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	4e-04
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	7e-04
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	0.001
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	0.004

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  269 bits (689), Expect = 5e-83
 Identities = 157/424 (37%), Positives = 240/424 (56%), Gaps = 43/424 (10%)

Query: 369 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGET 428
           TPLH+A+      IV+ LL+ GAS +                              + ET
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNV--------------------------KVET 35

Query: 429 PLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAP 488
           PLH+AARA  T++ + LL+N A V+A+A++DQTPLH A+R+G+ ++  LLL++ A+ +  
Sbjct: 36  PLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLA 95

Query: 489 TKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD 548
           T  G+T LHI+A+EG  E    L E  AS    TKKGFTPLH+AAKYG++++A++LL++D
Sbjct: 96  TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERD 155

Query: 549 APVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNG 608
           A  +                 A  K G TPLH+A  +  + I ++LL +     S   NG
Sbjct: 156 AHPN-----------------AAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNG 198

Query: 609 VTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPN 668
            TPLH+A+  +   VA  LL  G S +A +  G TPLH+AA++   ++   LL   A  N
Sbjct: 199 YTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN 258

Query: 669 AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMF 728
             +K+G TPLHL AQEGH  ++ +LI+HG  V    + G TPLH+ +    + +    + 
Sbjct: 259 LGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQ 318

Query: 729 NGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLI 788
           + A+++  TK G++PLH A+  G  ++V  L++NGA+ N  ++ G TPL  A + G + +
Sbjct: 319 HQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISV 378

Query: 789 IDLL 792
            D+L
Sbjct: 379 TDVL 382

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  268 bits (686), Expect = 1e-82
 Identities = 148/409 (36%), Positives = 212/409 (51%), Gaps = 18/409 (4%)

Query: 97  TPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEA 156
           TPL++A+   H  +V+ LL +G +  ++     TPLH+A + G   + + L+   A + A
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 157 KTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYH 216
           K +D  TPLHCAAR GH N++ +L+E  A     T  G  PLH+A++  H      L+  
Sbjct: 62  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121

Query: 217 GAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSS 276
            A    +T    T LHVA+  G VRVA+ LL+R A PNA   NG TPLH+A         
Sbjct: 122 EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHH------ 175

Query: 277 HCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLT 336
             N++ + K LL R   P++ A NG+TPLHIA K+N+ +V   LL+YG S  A +  G+T
Sbjct: 176 --NNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVT 233

Query: 337 PLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDAR 396
           PLH+A+  G   +   LL   A  +     G TPLHL A+     +  +L+++G  VDA 
Sbjct: 234 PLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDAT 293

Query: 397 AREDQTPLHVASRLRRFSSASQSALTRVR-------GETPLHLAARANQTDIVRILLRNG 449
            R   TPLHVAS              +         G +PLH AA+   TDIV +LL+NG
Sbjct: 294 TRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG 353

Query: 450 ASVDARAREDQTPLHVASRLGNGDIASLL---LQHGASVDAPTKDGYTA 495
           AS +  + +  TPL +A RLG   +  +L       + V    K   + 
Sbjct: 354 ASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSF 402

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  267 bits (683), Expect = 4e-82
 Identities = 149/449 (33%), Positives = 228/449 (50%), Gaps = 48/449 (10%)

Query: 129 ITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALY 188
           +TPLHVA   G + +V+ L+ +GA+         TPLH AAR+GH  V   L++  A + 
Sbjct: 1   LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 60

Query: 189 SKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLD 248
           +K K+   PLH A++  H    ++L+ + A  +  T    T LH+A+  GHV     LL+
Sbjct: 61  AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE 120

Query: 249 RKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIA 308
           ++A        GFTPLH+A K           V VA+ LL+R A PNA   NG TPLH+A
Sbjct: 121 KEASQACMTKKGFTPLHVAAK--------YGKVRVAELLLERDAHPNAAGKNGLTPLHVA 172

Query: 309 CKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGE 368
              N   +V+LLL  G S  +   +G TPLH+A+    + +A  LLQ G + +  +V+G 
Sbjct: 173 VHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGV 232

Query: 369 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGET 428
           TPLHLAA+    ++V +LL   A+ +   +                           G T
Sbjct: 233 TPLHLAAQEGHAEMVALLLSKQANGNLGNKS--------------------------GLT 266

Query: 429 PLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAP 488
           PLHL A+     +  +L+++G  VDA  R   TPLHVAS  GN  +   LLQH A V+A 
Sbjct: 267 PLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAK 326

Query: 489 TKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD 548
           TK GY+ LH +A++G  ++ ++L ++GAS    +  G TPL +A + G + +  +L    
Sbjct: 327 TKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLK--- 383

Query: 549 APVDSQGKVASILTESGASITATTKKGFT 577
                      ++T+  + +  + K   +
Sbjct: 384 -----------VVTDETSFVLVSDKHRMS 401

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  255 bits (652), Expect = 8e-78
 Identities = 154/452 (34%), Positives = 230/452 (50%), Gaps = 54/452 (11%)

Query: 228 LTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTL 287
           LT LHVAS  GH+ + K LL R A PN   +   TPLH+A +          H  VAK L
Sbjct: 1   LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAG--------HTEVAKYL 52

Query: 288 LDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCM 347
           L  KA  NA+A +  TPLH A +     +V+LLL+  A+    T +G TPLH+A+  G +
Sbjct: 53  LQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV 112

Query: 348 NIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVA 407
              + LL+  A+    T +G TPLH+AA+  +  +  +LL   A  +A  +         
Sbjct: 113 ETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKN-------- 164

Query: 408 SRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVAS 467
                             G TPLH+A   N  DIV++LL  G S  + A    TPLH+A+
Sbjct: 165 ------------------GLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAA 206

Query: 468 RLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFT 527
           +    ++A  LLQ+G S +A +  G T LH++A+EG  E+ ++L    A+     K G T
Sbjct: 207 KQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLT 266

Query: 528 PLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGR 587
           PLHL A+ G + +A +L++                  G  + ATT+ G+TPLH+A+ YG 
Sbjct: 267 PLHLVAQEGHVPVADVLIKH-----------------GVMVDATTRMGYTPLHVASHYGN 309

Query: 588 MKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHI 647
           +K+ + LLQ  A V+++ K G +PLH A+   H ++  LLL  GASP+ V+ +G TPL I
Sbjct: 310 IKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAI 369

Query: 648 AAKKNQMDIATTL---LEYNAKPNAESKAGFT 676
           A +   + +   L    +  +      K   +
Sbjct: 370 AKRLGYISVTDVLKVVTDETSFVLVSDKHRMS 401

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  253 bits (646), Expect = 8e-77
 Identities = 176/377 (46%), Positives = 251/377 (66%), Gaps = 17/377 (4%)

Query: 428 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDA 487
           TPLH+A+      IV+ LL+ GAS +    + +TPLH+A+R G+ ++A  LLQ+ A V+A
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 488 PTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 547
             KD  T LH +A+ G   +  +L E+ A+    T  G TPLH+AA+ G ++    L   
Sbjct: 62  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLAL--- 118

Query: 548 DAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKN 607
                          E  AS    TKKGFTPLH+AAKYG++++A++LL++DA  ++ GKN
Sbjct: 119 --------------LEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKN 164

Query: 608 GVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKP 667
           G+TPLHVA H+++ ++  LLL RG SPH+ A NGYTPLHIAAK+NQ+++A +LL+Y    
Sbjct: 165 GLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA 224

Query: 668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM 727
           NAES  G TPLHL+AQEGH +M +LL+   A  +   K+GLTPLHL AQE  V VA + +
Sbjct: 225 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLI 284

Query: 728 FNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVL 787
            +G  +D  T+ G+TPLH+ASH+G + +V++L+++ A+VNA T LGY+PLHQA+QQG   
Sbjct: 285 KHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTD 344

Query: 788 IIDLLLGAGAQPNATTN 804
           I+ LLL  GA PN  ++
Sbjct: 345 IVTLLLKNGASPNEVSS 361

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  224 bits (571), Expect = 4e-66
 Identities = 130/385 (33%), Positives = 197/385 (51%), Gaps = 15/385 (3%)

Query: 25  ALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDN 84
            LH+A+          LL+   ++  +      T L ++         G  EVAK L+ N
Sbjct: 3   PLHVASFMGHLPIVKNLLQ-RGASPNVSNVKVETPLHMAARA------GHTEVAKYLLQN 55

Query: 85  GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMV 144
            A +N ++ +  TPL+ AA+  H  +V+ LL    N  LAT    TPLH+A + G V  V
Sbjct: 56  KAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETV 115

Query: 145 ELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQG 204
             L+ K A+    T+ G TPLH AA+ G   V ++L+E+ A   +  KNGL PLH+A   
Sbjct: 116 LALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHH 175

Query: 205 DHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPL 264
           ++    ++L+  G        +  T LH+A+    V VA++LL      NA ++ G TPL
Sbjct: 176 NNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPL 235

Query: 265 HIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYG 324
           H+A ++   +                +A+ N    +G TPLH+  ++    V ++L+K+G
Sbjct: 236 HLAAQEGHAEMVALLLSK--------QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG 287

Query: 325 ASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVR 384
             + ATT  G TPLHVAS  G + +  FLLQ  A  +  T  G +PLH AA+   TDIV 
Sbjct: 288 VMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVT 347

Query: 385 ILLRNGASVDARAREDQTPLHVASR 409
           +LL+NGAS +  + +  TPL +A R
Sbjct: 348 LLLKNGASPNEVSSDGTTPLAIAKR 372

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (505), Expect = 6e-57
 Identities = 113/329 (34%), Positives = 169/329 (51%), Gaps = 17/329 (5%)

Query: 494 TALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS 553
           T LH+++  G   +   L + GAS   +  K  TPLH+AA+ G  ++A+ LLQ       
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQN------ 55

Query: 554 QGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLH 613
                       A + A  K   TPLH AA+ G   + ++LL+ +A  +     G TPLH
Sbjct: 56  -----------KAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLH 104

Query: 614 VASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKA 673
           +A+   H    L LL++ AS   + K G+TPLH+AAK  ++ +A  LLE +A PNA  K 
Sbjct: 105 IAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKN 164

Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEI 733
           G TPLH++    + D+  LL+  G +    A NG TPLH+ A++++V VA   +  G   
Sbjct: 165 GLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA 224

Query: 734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
           +  +  G TPLH+A+  G   MV  L+   AN N     G TPLH  +Q+G V + D+L+
Sbjct: 225 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLI 284

Query: 794 GAGAQPNATTNLFCCATILVKNGAEIDPV 822
             G   +ATT +      +  +   I  V
Sbjct: 285 KHGVMVDATTRMGYTPLHVASHYGNIKLV 313

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  186 bits (473), Expect = 1e-52
 Identities = 120/389 (30%), Positives = 188/389 (48%), Gaps = 52/389 (13%)

Query: 2   QQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSN 57
           + GH  V   LL+N    + K K     LH AA+                          
Sbjct: 42  RAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARI------------------------- 76

Query: 58  TKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSK 117
                          G   + K+L++N A  N+ +  G TPL++AA+E H   V  LL K
Sbjct: 77  ---------------GHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI 177
             +Q   T+   TPLHVA K+GKV + ELL+ + A+  A  ++GLTPLH A    + +++
Sbjct: 122 EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIV 181

Query: 178 DILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHC 237
            +L+ +G + +S   NG  PLH+A++ +     R L+ +G   +  +V  +T LH+A+  
Sbjct: 182 KLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQE 241

Query: 238 GHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNAR 297
           GH  +   LL ++A+ N    +G TPLH+             HV VA  L+      +A 
Sbjct: 242 GHAEMVALLLSKQANGNLGNKSGLTPLHLVA--------QEGHVPVADVLIKHGVMVDAT 293

Query: 298 ALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAG 357
              G+TPLH+A      K+V+ LL++ A + A T+ G +PLH A+  G  +I   LL+ G
Sbjct: 294 TRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG 353

Query: 358 AAPDTATVRGETPLHLAARANQTDIVRIL 386
           A+P+  +  G TPL +A R     +  +L
Sbjct: 354 ASPNEVSSDGTTPLAIAKRLGYISVTDVL 382

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (394), Expect = 7e-42
 Identities = 79/220 (35%), Positives = 114/220 (51%)

Query: 610 TPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNA 669
           TPLHVAS   H  +   LL RGASP+       TPLH+AA+    ++A  LL+  AK NA
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 670 ESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN 729
           ++K   TPLH +A+ GHT+M  LL+E+ A  +     G TPLH+ A+E  V      +  
Sbjct: 62  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121

Query: 730 GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLII 789
            A    +TK GFTPLH+A+ +G++ +   L+E  A+ NA    G TPLH A     + I+
Sbjct: 122 EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIV 181

Query: 790 DLLLGAGAQPNATTNLFCCATILVKNGAEIDPVTKLSDEH 829
            LLL  G  P++          +     +++    L    
Sbjct: 182 KLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYG 221

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (357), Expect = 5e-37
 Identities = 90/288 (31%), Positives = 139/288 (48%), Gaps = 12/288 (4%)

Query: 16  DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQE 75
               K     LH+AAK    + A LLLE   ++         T L V++ +         
Sbjct: 126 ACMTKKGFTPLHVAAKYGKVRVAELLLERD-AHPNAAGKNGLTPLHVAVHH------NNL 178

Query: 76  EVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVA 135
           ++ K+L+  G + +  + NG+TPL++AA++N   V R LL  GG+    +   +TPLH+A
Sbjct: 179 DIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLA 238

Query: 136 CKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGL 195
            + G   MV LL+SK AN     + GLTPLH  A+ GH  V D+LI+ G  + + T+ G 
Sbjct: 239 AQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGY 298

Query: 196 APLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNA 255
            PLH+AS   +    + L+ H A V+  T    + LH A+  GH  +   LL   A PN 
Sbjct: 299 TPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE 358

Query: 256 RALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFT 303
            + +G TPL IA +       + +   V K + D  +       +  +
Sbjct: 359 VSSDGTTPLAIAKRLG-----YISVTDVLKVVTDETSFVLVSDKHRMS 401

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (220), Expect = 2e-19
 Identities = 33/102 (32%), Positives = 49/102 (48%)

Query: 708 LTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN 767
           LTPLH+ +    + +    +  GA  +       TPLH+A+  G   + +YL++N A VN
Sbjct: 1   LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 60

Query: 768 ATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCA 809
           A      TPLH A++ G   ++ LLL   A PN  T      
Sbjct: 61  AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTP 102

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 1e-04
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 42/116 (36%)

Query: 15  NDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQ 74
            + K K+    LH AA++                                        G 
Sbjct: 323 VNAKTKLGYSPLHQAAQQ----------------------------------------GH 342

Query: 75  EEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYL--LSKGGNQTLATEHN 128
            ++  +L+ NGA+ N  S +G TPL +A +  +  V   L  ++   +  L ++ +
Sbjct: 343 TDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKH 398

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (392), Expect = 7e-43
 Identities = 82/290 (28%), Positives = 120/290 (41%), Gaps = 25/290 (8%)

Query: 124 ATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRD-GLTPLHCAARSGHDNVIDILIE 182
           A   +   L  A +   V +V+ L+  GAN+  +  + G TPLH A +   ++++++L+ 
Sbjct: 1   AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR 60

Query: 183 KGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRV 242
            GA    + KNG  P  +A+        ++ +  GA V+E      TA   A+  G V+ 
Sbjct: 61  HGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 120

Query: 243 AKTLLDRKADPNAR----------ALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRK- 291
            K L  R A+ N R             G T L  A +K         HV V K LLD   
Sbjct: 121 LKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG--------HVEVLKILLDEMG 172

Query: 292 ADPNARALNGFTPLHIACKKNRY----KVVELLLKYGASIAATTESGLTPLHVASFMGCM 347
           AD NA    G   L  A   +       +  LLL +GA +    E G TPL +A     +
Sbjct: 173 ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHL 232

Query: 348 NIAIFLL-QAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDAR 396
            +   LL Q     +     G+T L LA       I  +L + GAS D  
Sbjct: 233 GLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (378), Expect = 5e-41
 Identities = 82/283 (28%), Positives = 116/283 (40%), Gaps = 17/283 (6%)

Query: 92  SLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHN-ITPLHVACKWGKVAMVELLISK 150
           ++     L  A Q     +V+ LL  G N     E    TPLH A +  +  +VELL+  
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61

Query: 151 GANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAAT 210
           GA+   + ++G TP   AA +G   ++ + + KGA +      G      A+      A 
Sbjct: 62  GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 121

Query: 211 RVLIYHGAG----------VDEITVDYLTALHVASHCGHVRVAKTLLDRK-ADPNARALN 259
           + L   GA            + +     TAL  A+  GHV V K LLD   AD NA    
Sbjct: 122 KFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNM 181

Query: 260 GFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVEL 319
           G      A       S   +   +   LLD  AD N R   G TPL +A +K    +V+ 
Sbjct: 182 G----RNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR 237

Query: 320 LL-KYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPD 361
           LL +    I  T   G T L +A  +    IA  L + GA+ D
Sbjct: 238 LLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (369), Expect = 7e-40
 Identities = 71/292 (24%), Positives = 116/292 (39%), Gaps = 32/292 (10%)

Query: 527 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYG 586
             L  A +   + + Q LL+  A V+ Q                  + G+TPLH A +  
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQ----------------EEEGGWTPLHNAVQMS 50

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLH 646
           R  I ++LL+  A    + KNG TP  +A+      +  L L +GA  +     G+T   
Sbjct: 51  REDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFM 110

Query: 647 IAAKKNQMDIATTLLEYNAKPN----------AESKAGFTPLHLSAQEGHTDMSSLLIEH 696
            AA   ++     L +  A  N             K G T L  +A++GH ++  +L++ 
Sbjct: 111 EAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE 170

Query: 697 -GATVSHQAKNGLTPLHLCAQEDKVNVATITMF----NGAEIDPVTKAGFTPLHIASHFG 751
            GA V+     G   L         +           +GA+++   + G TPL +A    
Sbjct: 171 MGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKK 230

Query: 752 QLNMVRYLVE-NGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT 802
            L +V+ L+E     +N T + G T L  A +     I +LL   GA  +  
Sbjct: 231 HLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (359), Expect = 2e-38
 Identities = 79/330 (23%), Positives = 124/330 (37%), Gaps = 65/330 (19%)

Query: 456 AREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKD-GYTALHISAKEGQDEVASILTES 514
           A ED   L  A +  + D+   LL+ GA+V+   ++ G+T LH + +  ++++  +L   
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61

Query: 515 GASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKK 574
           GA      K G TP  LAA  G +K+ ++ L K                 GA +      
Sbjct: 62  GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSK-----------------GADVNECDFY 104

Query: 575 GFTPLHLAAKYGRMKIAQMLLQKDA----------PVDSQGKNGVTPLHVASHYDHQNVA 624
           GFT    AA YG++K  + L ++ A            +   K G T L  A+   H  V 
Sbjct: 105 GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVL 164

Query: 625 LLLLDR-GASPHAVAKNGYTPLHIAAKKNQM----DIATTLLEYNAKPNAESKAGFTPLH 679
            +LLD  GA  +A    G   L  A   +       I   LL++ A  N   + G TPL 
Sbjct: 165 KILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI 224

Query: 680 LSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKA 739
           L+ ++ H  +   L+E                                    EI+     
Sbjct: 225 LAVEKKHLGLVQRLLEQE--------------------------------HIEINDTDSD 252

Query: 740 GFTPLHIASHFGQLNMVRYLVENGANVNAT 769
           G T L +A       +   L + GA+ +  
Sbjct: 253 GKTALLLAVELKLKKIAELLCKRGASTDCG 282

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (358), Expect = 3e-38
 Identities = 81/322 (25%), Positives = 126/322 (39%), Gaps = 56/322 (17%)

Query: 363 ATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALT 422
           A V     L  A +    D+V+ LL  GA+V+ +  E                       
Sbjct: 1   AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEG---------------------- 38

Query: 423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
              G TPLH A + ++ DIV +LLR+GA    R +   TP  +A+  G+  +  L L  G
Sbjct: 39  ---GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKG 95

Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASILTESGAS----------ITATTKKGFTPLHLA 532
           A V+     G+TA   +A  G+ +    L + GA+               K G T L  A
Sbjct: 96  ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 155

Query: 533 AKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKG----FTPLHLAAKYGRM 588
           A+ G +++ ++LL                 E GA + A    G       L  +      
Sbjct: 156 AEKGHVEVLKILLD----------------EMGADVNACDNMGRNALIHALLSSDDSDVE 199

Query: 589 KIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDR-GASPHAVAKNGYTPLHI 647
            I  +LL   A V+ +G+ G TPL +A    H  +   LL++     +    +G T L +
Sbjct: 200 AITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLL 259

Query: 648 AAKKNQMDIATTLLEYNAKPNA 669
           A +     IA  L +  A  + 
Sbjct: 260 AVELKLKKIAELLCKRGASTDC 281

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (345), Expect = 1e-36
 Identities = 74/306 (24%), Positives = 119/306 (38%), Gaps = 43/306 (14%)

Query: 229 TALHVASHCGHVRVAKTLLDRKADPNAR-ALNGFTPLHIACKKNRYKSSHCNHVWVAKTL 287
             L  A     V + + LL+  A+ N +    G+TPLH A +         +   + + L
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQ--------MSREDIVELL 58

Query: 288 LDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCM 347
           L   ADP  R  NG TP  +A      K+++L L  GA +      G T    A+  G +
Sbjct: 59  LRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 118

Query: 348 NIAIFLLQAGA----------APDTATVRGETPLHLAARANQTDIVRILL-RNGASVDAR 396
               FL + GA            +     G T L  AA     ++++ILL   GA V+A 
Sbjct: 119 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNAC 178

Query: 397 AREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARA 456
               +  L                         L  +  ++   I  +LL +GA V+ R 
Sbjct: 179 DNMGRNALI----------------------HALLSSDDSDVEAITHLLLDHGADVNVRG 216

Query: 457 REDQTPLHVASRLGNGDIASLLLQH-GASVDAPTKDGYTALHISAKEGQDEVASILTESG 515
              +TPL +A    +  +   LL+     ++    DG TAL ++ +    ++A +L + G
Sbjct: 217 ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG 276

Query: 516 ASITAT 521
           AS    
Sbjct: 277 ASTDCG 282

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.6 bits (239), Expect = 2e-22
 Identities = 65/245 (26%), Positives = 97/245 (39%), Gaps = 16/245 (6%)

Query: 610 TPLHVASHYDHQNVALLLLDRGASPHAV-AKNGYTPLHIAAKKNQMDIATTLLEYNAKPN 668
             L  A   +  ++   LL+ GA+ +    + G+TPLH A + ++ DI   LL + A P 
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 66

Query: 669 AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMF 728
              K G TP  L+A  G   +  L +  GA V+     G T     A   KV        
Sbjct: 67  LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK 126

Query: 729 NGAE----------IDPVTKAGFTPLHIASHFGQLNMVRYLV-ENGANVNATTNLGYTPL 777
            GA            + + K G T L  A+  G + +++ L+ E GA+VNA  N+G   L
Sbjct: 127 RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNAL 186

Query: 778 HQASQQGRVL----IIDLLLGAGAQPNATTNLFCCATILVKNGAEIDPVTKLSDEHEKSI 833
             A           I  LLL  GA  N          IL      +  V +L ++    I
Sbjct: 187 IHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEI 246

Query: 834 DLPNR 838
           +  + 
Sbjct: 247 NDTDS 251

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (220), Expect = 5e-20
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 6/119 (5%)

Query: 73  GQEEVAKILVDN-GATINVQSLNGFTPLYMAAQENHDG----VVRYLLSKGGNQTLATEH 127
           G  EV KIL+D  GA +N     G   L  A   + D     +   LL  G +  +  E 
Sbjct: 159 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER 218

Query: 128 NITPLHVACKWGKVAMVELLISK-GANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGA 185
             TPL +A +   + +V+ L+ +    I     DG T L  A       + ++L ++GA
Sbjct: 219 GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA 277

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (217), Expect = 1e-19
 Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 3/134 (2%)

Query: 25  ALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDN 84
           AL  AA+K   +   +LL+   ++  +    +  +  +  +    + +  E +  +L+D+
Sbjct: 151 ALMDAAEKGHVEVLKILLDEMGAD--VNACDNMGRNALIHALLSSDDSDVEAITHLLLDH 208

Query: 85  GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGG-NQTLATEHNITPLHVACKWGKVAM 143
           GA +NV+   G TPL +A ++ H G+V+ LL +             T L +A +     +
Sbjct: 209 GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKI 268

Query: 144 VELLISKGANIEAK 157
            ELL  +GA+ +  
Sbjct: 269 AELLCKRGASTDCG 282

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.3 bits (215), Expect = 2e-19
 Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 12/183 (6%)

Query: 638 AKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE-SKAGFTPLHLSAQEGHTDMSSLLIEH 696
           A      L  A +   +D+   LLE  A  N +  + G+TPLH + Q    D+  LL+ H
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61

Query: 697 GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMV 756
           GA    + KNG TP  L A    V +  + +  GA+++     GFT    A+ +G++  +
Sbjct: 62  GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 121

Query: 757 RYLVENGANVN----------ATTNLGYTPLHQASQQGRVLIIDLLLG-AGAQPNATTNL 805
           ++L + GANVN               G T L  A+++G V ++ +LL   GA  NA  N+
Sbjct: 122 KFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNM 181

Query: 806 FCC 808
              
Sbjct: 182 GRN 184

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (96), Expect = 2e-04
 Identities = 17/124 (13%), Positives = 33/124 (26%), Gaps = 43/124 (34%)

Query: 1   MQQGHDRVVAVLLEN----DTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLS 56
                + +  +LL++    + +G+     L +A +K        LLE             
Sbjct: 194 DDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE------------- 240

Query: 57  NTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLS 116
                                          IN    +G T L +A +     +   L  
Sbjct: 241 --------------------------QEHIEINDTDSDGKTALLLAVELKLKKIAELLCK 274

Query: 117 KGGN 120
           +G +
Sbjct: 275 RGAS 278

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  145 bits (366), Expect = 1e-38
 Identities = 48/359 (13%), Positives = 88/359 (24%), Gaps = 56/359 (15%)

Query: 145 ELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQG 204
             + +   ++   +      +        + V  +L    A      K   +  H     
Sbjct: 30  HFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIK 89

Query: 205 DHEAATRVLIYHGAGVDEITVDYLTALHVASHCGH---VRVAKTLLDRKADPNARALNGF 261
                                       VA+  G    +     LL             +
Sbjct: 90  SE----------------------VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENY 127

Query: 262 TPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALN--GFTPLHIACKKNRYKVVEL 319
               +A +          H+ V   L +         +    +    +A +     V+  
Sbjct: 128 QAFRLAAENG--------HLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNR 179

Query: 320 LLKYGASIA---ATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAAR 376
           L +   + A      E+       A   G  N+  FLL                      
Sbjct: 180 LCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAY-------AEIHEFE 232

Query: 377 ANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTR-VRGETPLHLAAR 435
             +  +   + R+      R +E      +++    F   ++S   +       L     
Sbjct: 233 YGEKYVNPFIARHVN----RLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRND 288

Query: 436 ANQTDIVRILLRNGA-----SVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPT 489
               D +R LL                +    L +A RLGN    +LLL    SV A T
Sbjct: 289 EVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP-SVLALT 346

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  143 bits (360), Expect = 6e-38
 Identities = 45/386 (11%), Positives = 95/386 (24%), Gaps = 64/386 (16%)

Query: 419 SALTRVRGETPLHLAARANQTDIVRILL-RNGASVDARAREDQTPLHVASRLGNGDIASL 477
             +     +  L L       ++ +  +  N  S+   + ++   + +        +  L
Sbjct: 5   HNIENYENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQL 64

Query: 478 LLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGR 537
           L  + A  +   K  ++  H                          K      +AA  G 
Sbjct: 65  LCLYYAHYNRNAKQLWSDAH----------------------KKGIKSEVICFVAAITGC 102

Query: 538 MKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 597
                 L               +L  S   +     + +    LAA+ G + +   L + 
Sbjct: 103 SSALDTL--------------CLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL 148

Query: 598 DAPVDSQGKN--GVTPLHVASHYDHQNVALLLLDRGASP---HAVAKNGYTPLHIAAKKN 652
                             +A+   H +V   L +   +       A+N Y     A  + 
Sbjct: 149 APTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRG 208

Query: 653 QMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLH 712
             ++   LL+                    + G   ++  +  H   +            
Sbjct: 209 HHNVINFLLDCPVMLA-------YAEIHEFEYGEKYVNPFIARHVNRLKE----MHDAFK 257

Query: 713 LCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA-----NVN 767
           L   +   ++ T                   L   +    L+ +R+L+            
Sbjct: 258 LSNPDGVFDLVT------KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTA 311

Query: 768 ATTNLGYTPLHQASQQGRVLIIDLLL 793
                    L  A + G      LLL
Sbjct: 312 TIPGDANELLRLALRLGNQGACALLL 337

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  134 bits (337), Expect = 6e-35
 Identities = 32/265 (12%), Positives = 69/265 (26%), Gaps = 35/265 (13%)

Query: 76  EVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGG--NQTLATEHNITPLH 133
           +   +L+ +   + V     +    +AA+  H  V+  L          +    N     
Sbjct: 107 DTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFR 166

Query: 134 VACKWGKVAMVELLISKGANIE---AKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSK 190
           +A + G + ++  L            +  +       A   GH NVI+ L++        
Sbjct: 167 LAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP------ 220

Query: 191 TKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRK 250
                       +   +     +  H   + E+      A  +++  G   +        
Sbjct: 221 -VMLAYAEIHEFEYGEKYVNPFIARHVNRLKEM----HDAFKLSNPDGVFDLVT------ 269

Query: 251 ADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADP-----NARALNGFTPL 305
                +       L                +   + LL                +    L
Sbjct: 270 KSECLQGFYMLRNLIRRN--------DEVLLDDIRFLLSIPGIKALAPTATIPGDANELL 321

Query: 306 HIACKKNRYKVVELLLKYGASIAAT 330
            +A +        LLL   + +A T
Sbjct: 322 RLALRLGNQGACALLLSIPSVLALT 346

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  133 bits (335), Expect = 1e-34
 Identities = 43/359 (11%), Positives = 95/359 (26%), Gaps = 62/359 (17%)

Query: 352 FLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLR 411
           F+     +  T + +    + L    N   + ++L    A  +  A++  +  H      
Sbjct: 31  FISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGI-- 88

Query: 412 RFSSASQSALTRVRGETPLHLAARANQTDIVRI---LLRNGASVDARAREDQTPLHVASR 468
                        + E    +AA    +  +     LL +   V     E+     +A+ 
Sbjct: 89  -------------KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAE 135

Query: 469 LGNGDIASLLLQHGASVDA--PTKDGYTALHISAKEGQDEVASILTESGASITATTKK-- 524
            G+  + + L +   +        + Y A  ++A+ G   V + L E   +      +  
Sbjct: 136 NGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAE 195

Query: 525 -GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAA 583
             +     A   G   +   LL     +                                
Sbjct: 196 NYYAFRWAAVGRGHHNVINFLLDCPVMLA------------------------YAEIHEF 231

Query: 584 KYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYT 643
           +YG   +   + +    +    K       +++     ++         S          
Sbjct: 232 EYGEKYVNPFIARHVNRL----KEMHDAFKLSNPDGVFDLV------TKSECLQGFYMLR 281

Query: 644 PLHIAAKKNQMDIATTLLE-----YNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHG 697
            L     +  +D    LL        A            L L+ + G+    +LL+   
Sbjct: 282 NLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP 340

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  132 bits (333), Expect = 2e-34
 Identities = 43/359 (11%), Positives = 80/359 (22%), Gaps = 76/359 (21%)

Query: 428 TPLHLAARANQTDIVRILLRNGASVDA-----------RAREDQTPLHVASRLGNGDI-- 474
             + L    N   + ++L    A  +            +  + +    VA+  G      
Sbjct: 48  IHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALD 107

Query: 475 -ASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKK--GFTPLHL 531
              LLL     V     + Y A  ++A+ G   V + L E   +      +   +    L
Sbjct: 108 TLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRL 167

Query: 532 AAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIA 591
           AA+ G + +   L +      +                   +  +     A   G   + 
Sbjct: 168 AAENGHLHVLNRLCELAPTEATA--------------MIQAENYYAFRWAAVGRGHHNVI 213

Query: 592 QMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKK 651
             LL                      Y  + V   +           K  +    ++   
Sbjct: 214 NFLLD-------CPVMLAYAEIHEFEYGEKYVNPFIARHVNR----LKEMHDAFKLSNPD 262

Query: 652 NQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPL 711
              D+             +       L     E   D    L+                 
Sbjct: 263 GVFDLV------TKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIK----------- 305

Query: 712 HLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATT 770
                              A    +       L +A   G       L+    +V A T
Sbjct: 306 -----------------ALAPTATIPGDANELLRLALRLGNQGACALLLSIP-SVLALT 346

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  132 bits (332), Expect = 3e-34
 Identities = 47/352 (13%), Positives = 87/352 (24%), Gaps = 60/352 (17%)

Query: 52  EVSLSNTKLEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVV 111
           E+SL     + ++          E+V ++L    A  N  +   ++  +    ++     
Sbjct: 36  ELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSE---- 91

Query: 112 RYLLSKGGNQTLATEHNITPLHVACKWG---KVAMVELLISKGANIEAKTRDGLTPLHCA 168
                                 VA   G    +  + LL++    ++    +       A
Sbjct: 92  ------------------VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLA 133

Query: 169 ARSGHDNVIDILIEKGAALYSKTKN--GLAPLHMASQGDHEAATRVLIYHGAGVDEITV- 225
           A +GH +V++ L E                   +A++  H      L           + 
Sbjct: 134 AENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQ 193

Query: 226 --DYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWV 283
             +Y      A   GH  V   LLD                    +            +V
Sbjct: 194 AENYYAFRWAAVGRGHHNVINFLLDCPVMLA-------YAEIHEFEY--------GEKYV 238

Query: 284 AKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASF 343
              +         R         ++     + +V        S        L  L   + 
Sbjct: 239 NPFIARH----VNRLKEMHDAFKLSNPDGVFDLVT------KSECLQGFYMLRNLIRRND 288

Query: 344 MGCMNIAIFLLQAGAAPDTATV-----RGETPLHLAARANQTDIVRILLRNG 390
              ++   FLL        A            L LA R        +LL   
Sbjct: 289 EVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP 340

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  122 bits (307), Expect = 5e-31
 Identities = 39/340 (11%), Positives = 78/340 (22%), Gaps = 55/340 (16%)

Query: 283 VAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGL------- 335
               +   +      +      + +   KN  +V +LL  Y A      +          
Sbjct: 28  FQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKG 87

Query: 336 ----TPLHVASFMGCMNI---AIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLR 388
                   VA+  GC +       LL +                LAA      ++  L  
Sbjct: 88  IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCE 147

Query: 389 NGASVDAR--AREDQTPLHVASR----------LRRFSSASQSALTRVRGETPLHLAARA 436
              +        E+     +A+                + + + +           A   
Sbjct: 148 LAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGR 207

Query: 437 NQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTAL 496
              +++  LL     +                 G   +   + +H   +    K+ + A 
Sbjct: 208 GHHNVINFLLDCPVMLA-------YAEIHEFEYGEKYVNPFIARHVNRL----KEMHDAF 256

Query: 497 HISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGK 556
            +S  +G  ++         S           L        +   + LL           
Sbjct: 257 KLSNPDGVFDLV------TKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKA---- 306

Query: 557 VASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 596
                    A            L LA + G      +LL 
Sbjct: 307 --------LAPTATIPGDANELLRLALRLGNQGACALLLS 338

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  114 bits (287), Expect = 2e-28
 Identities = 36/312 (11%), Positives = 88/312 (28%), Gaps = 31/312 (9%)

Query: 498 ISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKV 557
           I     ++     ++ +  S+   + K    + L       ++ Q+L    A  +   K 
Sbjct: 19  IPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAK- 77

Query: 558 ASILTESGASITATTKKGFTPLHLAAKYGR---MKIAQMLLQKDAPVDSQGKNGVTPLHV 614
                +  +       K      +AA  G    +    +LL  D  V            +
Sbjct: 78  -----QLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRL 132

Query: 615 ASHYDHQNVALLLLDRGASPHAVAKN--GYTPLHIAAKKNQMDIATTLLEYNAKPN---A 669
           A+   H +V   L +   +          Y    +AA+   + +   L E          
Sbjct: 133 AAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMI 192

Query: 670 ESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN 729
           +++  +     +   GH ++ + L++    ++              +  +  V      +
Sbjct: 193 QAENYYAFRWAAVGRGHHNVINFLLDCPVMLA-------YAEIHEFEYGEKYVNPFIARH 245

Query: 730 GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLII 789
              +    K       +++  G  ++V        +           L + + +  +  I
Sbjct: 246 VNRL----KEMHDAFKLSNPDGVFDLV------TKSECLQGFYMLRNLIRRNDEVLLDDI 295

Query: 790 DLLLGAGAQPNA 801
             LL        
Sbjct: 296 RFLLSIPGIKAL 307

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 80.7 bits (198), Expect = 7e-17
 Identities = 21/197 (10%), Positives = 53/197 (26%), Gaps = 28/197 (14%)

Query: 610 TPLHVASHYDHQN-VALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPN 668
             L +      +N     +     S   ++      + +   KN   +   L  Y A  N
Sbjct: 14  PQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYN 73

Query: 669 AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQE---DKVNVATI 725
             +K  ++  H                       +         + A       ++   +
Sbjct: 74  RNAKQLWSDAH----------------------KKGIKSEVICFVAAITGCSSALDTLCL 111

Query: 726 TMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNAT--TNLGYTPLHQASQQ 783
            + +   +  +    +    +A+  G L+++  L E              Y     A++ 
Sbjct: 112 LLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAEN 171

Query: 784 GRVLIIDLLLGAGAQPN 800
           G + +++ L        
Sbjct: 172 GHLHVLNRLCELAPTEA 188

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 70.7 bits (172), Expect = 1e-13
 Identities = 17/174 (9%), Positives = 40/174 (22%), Gaps = 26/174 (14%)

Query: 643 TPLHIAAKKNQMDIATTLL-EYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVS 701
             L +       ++    +          S      + L   +    +  LL  + A  +
Sbjct: 14  PQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYN 73

Query: 702 HQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS---HFGQLNMVRY 758
             AK   +  H    +                            +A+       L+ +  
Sbjct: 74  RNAKQLWSDAHKKGIK----------------------SEVICFVAAITGCSSALDTLCL 111

Query: 759 LVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCCATIL 812
           L+ +   V       Y     A++ G + +++ L                    
Sbjct: 112 LLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAF 165

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 2e-35
 Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 2/216 (0%)

Query: 579 LHLAAKYGRMK-IAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAV 637
           +   A  G+++ + + +L   +      ++  T LH A    H  +   LL  G   +  
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 638 AKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHG 697
              G++PLHIAA   + +I   LL   A+ NA ++ G TPLH +A +   +++ +L+E G
Sbjct: 67  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 126

Query: 698 ATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVR 757
           A    +     T +H  A +  + +  I ++  A  +     G TPLH+A    ++   +
Sbjct: 127 ANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAK 186

Query: 758 YLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
            LV  GA++        TPL  A + G  LI+  ++
Sbjct: 187 LLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (317), Expect = 1e-33
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 1/206 (0%)

Query: 556 KVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVA 615
           ++   +    +  T T +   T LH A   G  +I + LLQ   PV+ +   G +PLH+A
Sbjct: 18  ELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIA 77

Query: 616 SHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGF 675
           +      +   LL +GA  +AV +NG TPLH AA KN+ +IA  LLE  A P+A+     
Sbjct: 78  ASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEA 137

Query: 676 TPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDP 735
           T +H +A +G+  M  +L+ + A+ + Q   G TPLHL   E++V  A + +  GA I  
Sbjct: 138 TAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYI 197

Query: 736 VTKAGFTPLHIASHFGQLNMVRYLVE 761
             K   TPL +A   G   +++ +VE
Sbjct: 198 ENKEEKTPLQVAKG-GLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 6e-33
 Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 9/215 (4%)

Query: 75  EEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHV 134
           EE+ + ++ + +       +  T L+ A    H  +V +LL  G       +   +PLH+
Sbjct: 17  EELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHI 76

Query: 135 ACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNG 194
           A   G+  +V+ L+ KGA + A  ++G TPLH AA      +  +L+E GA   +K    
Sbjct: 77  AASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYE 136

Query: 195 LAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPN 254
              +H A+   +     +L+Y+ A  +    +  T LH+A     V  AK L+ + A   
Sbjct: 137 ATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIY 196

Query: 255 ARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLD 289
                  TPL +A               + K +++
Sbjct: 197 IENKEEKTPLQVAKG---------GLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (302), Expect = 1e-31
 Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 10/224 (4%)

Query: 165 LHCAARSGH-DNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEI 223
           +   A SG  + + + ++   +      ++    LH A    H      L+  G  V++ 
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 224 TVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWV 283
                + LH+A+  G   + K LL + A  NA   NG TPLH A  KN           +
Sbjct: 67  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKN--------RHEI 118

Query: 284 AKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASF 343
           A  LL+  A+P+A+     T +H A  K   K++ +LL Y AS       G TPLH+A  
Sbjct: 119 AVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACD 178

Query: 344 MGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILL 387
              +  A  L+  GA+        +TPL +A       I++ ++
Sbjct: 179 EERVEEAKLLVSQGASIYIENKEEKTPLQVAKG-GLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (301), Expect = 2e-31
 Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 8/212 (3%)

Query: 198 LHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARA 257
            ++A  G  E     ++   +       D  TALH A   GH  + + LL      N + 
Sbjct: 8   CNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD 67

Query: 258 LNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVV 317
             G++PLHIA               + K LL + A  NA   NG TPLH A  KNR+++ 
Sbjct: 68  DAGWSPLHIAA--------SAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIA 119

Query: 318 ELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARA 377
            +LL+ GA+  A      T +H A+  G + +   LL   A+ +     G TPLHLA   
Sbjct: 120 VMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDE 179

Query: 378 NQTDIVRILLRNGASVDARAREDQTPLHVASR 409
            + +  ++L+  GAS+    +E++TPL VA  
Sbjct: 180 ERVEEAKLLVSQGASIYIENKEEKTPLQVAKG 211

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (295), Expect = 1e-30
 Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 9/222 (4%)

Query: 101 MAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRD 160
           +A     + +   +L+     T   + + T LH AC  G   +VE L+  G  +  K   
Sbjct: 10  LAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDA 69

Query: 161 GLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGV 220
           G +PLH AA +G D ++  L+ KGA + +  +NG  PLH A+  +      +L+  GA  
Sbjct: 70  GWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP 129

Query: 221 DEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNH 280
           D       TA+H A+  G++++   LL  KA  N +   G TPLH+AC            
Sbjct: 130 DAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLAC--------DEER 181

Query: 281 VWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLK 322
           V  AK L+ + A          TPL +A K     +++ +++
Sbjct: 182 VEEAKLLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (293), Expect = 2e-30
 Identities = 73/242 (30%), Positives = 111/242 (45%), Gaps = 27/242 (11%)

Query: 305 LHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTAT 364
            ++A      ++ E +L   +    T +   T LH A   G   I  FLLQ G   +   
Sbjct: 8   CNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD 67

Query: 365 VRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRV 424
             G +PLH+AA A + +IV+ LL  GA V+A  +                          
Sbjct: 68  DAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQN------------------------- 102

Query: 425 RGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGAS 484
            G TPLH AA  N+ +I  +LL  GA+ DA+   + T +H A+  GN  +  +LL + AS
Sbjct: 103 -GCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAS 161

Query: 485 VDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 544
            +    +G T LH++  E + E A +L   GASI    K+  TPL +A   G   I + +
Sbjct: 162 TNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKG-GLGLILKRM 220

Query: 545 LQ 546
           ++
Sbjct: 221 VE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (287), Expect = 2e-29
 Identities = 65/233 (27%), Positives = 104/233 (44%), Gaps = 25/233 (10%)

Query: 371 LHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR-------LRRFSSASQSALTR 423
            +LA      ++   +L + +      ++ +T LH A                       
Sbjct: 8   CNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD 67

Query: 424 VRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGA 483
             G +PLH+AA A + +IV+ LL  GA V+A  +   TPLH A+     +IA +LL+ GA
Sbjct: 68  DAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGA 127

Query: 484 SVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQM 543
           + DA      TA+H +A +G  ++  IL    AS      +G TPLHLA    R++ A++
Sbjct: 128 NPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKL 187

Query: 544 LLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 596
           L+ +                 GASI    K+  TPL +A   G   I + +++
Sbjct: 188 LVSQ-----------------GASIYIENKEEKTPLQVAKG-GLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.3 bits (215), Expect = 6e-20
 Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 1/110 (0%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
            + E+A +L++ GA  + +     T ++ AA + +  ++  LL    +  +      TPL
Sbjct: 114 NRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPL 173

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIE 182
           H+AC   +V   +LL+S+GA+I  + ++  TPL  A   G   ++  ++E
Sbjct: 174 HLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKG-GLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (122), Expect = 1e-07
 Identities = 27/127 (21%), Positives = 42/127 (33%), Gaps = 33/127 (25%)

Query: 711 LHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG------------------- 751
            +L        +    + + +      +   T LH A   G                   
Sbjct: 8   CNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD 67

Query: 752 --------------QLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
                         +  +V+ L+  GA VNA    G TPLH A+ + R  I  +LL  GA
Sbjct: 68  DAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGA 127

Query: 798 QPNATTN 804
            P+A  +
Sbjct: 128 NPDAKDH 134

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  129 bits (323), Expect = 9e-34
 Identities = 64/275 (23%), Positives = 101/275 (36%), Gaps = 17/275 (6%)

Query: 130 TPLHVACK-WGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDIL-------- 180
           +P+ +  +  G  A+ E +  +  NI    R   T LH  A +      + L        
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNI-IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60

Query: 181 IEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHV 240
           I  GA + +   +   PL +A           L+  GA          +ALH A+     
Sbjct: 61  IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 120

Query: 241 RVAKTLLDR---KADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAK---TLLDRKADP 294
            +   +L+    K D      NG T L I              + V K      D  A  
Sbjct: 121 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 180

Query: 295 NARALNGFTPLHI-ACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFL 353
           ++    G T LH  A   N   V  L+ + G++     E G TP+ +A+  G + + ++L
Sbjct: 181 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL 240

Query: 354 LQAGAAPDTATVRGETPLHLAARANQTDIVRILLR 388
           +Q GA+ +       T   LA   N  +IV I  R
Sbjct: 241 IQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  122 bits (305), Expect = 2e-31
 Identities = 55/279 (19%), Positives = 109/279 (39%), Gaps = 14/279 (5%)

Query: 427 ETPLHLAARA-NQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQH---- 481
           E+P+ L   A     I   + R   ++    R ++T LH  +   + + +  L+ H    
Sbjct: 1   ESPIKLHTEAAGSYAITEPITRESVNI-IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKE 59

Query: 482 ----GASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGR 537
               GA V+A   D  T L ++    +  + + L ++GA  T   K   + LH AA    
Sbjct: 60  CIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRD 119

Query: 538 MKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 597
             +   +L          ++      +   +             +AK    K A++    
Sbjct: 120 FGMMVYMLNSTKLKGDIEELDRNGMTA---LMIVAHNEGRDQVASAKLLVEKGAKVDYDG 176

Query: 598 DAPVDSQGKNGVTPLHVASHYDH-QNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDI 656
            A  DS+   G T LH A+   +   V  L+ ++G++     ++G TP+ +AA++ ++++
Sbjct: 177 AARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEV 236

Query: 657 ATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIE 695
              L++  A   A      T   L+    H ++  +   
Sbjct: 237 VMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  119 bits (299), Expect = 1e-30
 Identities = 56/283 (19%), Positives = 102/283 (36%), Gaps = 31/283 (10%)

Query: 97  TPLYMAAQ-ENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELL-------- 147
           +P+ +  +      +   +  +  N      HN T LH           E L        
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60

Query: 148 ISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHE 207
           I+ GA++ A   D  TPL  A  +    ++  L++ GA      K+  + LH A+     
Sbjct: 61  IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 120

Query: 208 AATRVLIYHGAGVDEITVDYLT---ALHVASHCGHV-----------RVAKTLLDRKADP 253
                ++       +I         AL + +H               + AK   D  A  
Sbjct: 121 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 180

Query: 254 NARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNR 313
           ++    G T LH A +         N   V   + ++ ++ + +  +G TP+ +A ++ R
Sbjct: 181 DSEKYKGRTALHYAAQ-------VSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGR 233

Query: 314 YKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQA 356
            +VV  L++ GAS+ A   +  T   +A      NI     + 
Sbjct: 234 IEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC 276

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  118 bits (296), Expect = 3e-30
 Identities = 56/301 (18%), Positives = 103/301 (34%), Gaps = 31/301 (10%)

Query: 494 TALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS 553
             LH  A  G   +   +T    +I    +   T LH  A     + ++ L+  +A    
Sbjct: 4   IKLHTEAA-GSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEA---- 57

Query: 554 QGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLH 613
                     +GA + A      TPL LA    R ++   L++  A      K+  + LH
Sbjct: 58  -----KECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALH 112

Query: 614 VASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKA 673
            A+      + + +L+       + +     +                         +  
Sbjct: 113 QAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTA-------------------LMIVAHN 153

Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQ-EDKVNVATITMFNGAE 732
                  SA+      + +  +  A    +   G T LH  AQ  +   V  +    G+ 
Sbjct: 154 EGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN 213

Query: 733 IDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLL 792
            D   + G TP+ +A+  G++ +V YL++ GA+V A     +T    A       I+D+ 
Sbjct: 214 KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIF 273

Query: 793 L 793
            
Sbjct: 274 D 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  102 bits (255), Expect = 7e-25
 Identities = 53/274 (19%), Positives = 100/274 (36%), Gaps = 24/274 (8%)

Query: 229 TALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLL 288
             LH  +  G   + + +     +      +  T LH     +  + S    V  AK  +
Sbjct: 4   IKLHTEA-AGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECI 61

Query: 289 DRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMN 348
              AD NA   +  TPL +A    R ++V  L+K GA      +S  + LH A+      
Sbjct: 62  AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFG 121

Query: 349 IAIFLLQAGAAPDT--------------ATVRGETPLHLAARANQTDIVRILLRNGASVD 394
           + +++L +                               +A+       ++     A  D
Sbjct: 122 MMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD 181

Query: 395 ARAREDQTPLHVASRLRRFSSASQSALTR--------VRGETPLHLAARANQTDIVRILL 446
           +   + +T LH A+++            +          G+TP+ LAA+  + ++V  L+
Sbjct: 182 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLI 241

Query: 447 RNGASVDARAREDQTPLHVASRLGNGDIASLLLQ 480
           + GASV+A    D T   +A    + +I  +  +
Sbjct: 242 QQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 97.1 bits (240), Expect = 7e-23
 Identities = 51/252 (20%), Positives = 93/252 (36%), Gaps = 25/252 (9%)

Query: 577 TPLHLAAKY-GRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLD------ 629
           +P+ L  +  G   I + + ++   +    ++  T LH  +       +  L+       
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNI-IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60

Query: 630 --RGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHT 687
              GA  +A+  +  TPL +A    +  +   L++  A P   +K+  + LH +A     
Sbjct: 61  IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 120

Query: 688 DMSSLLIEHGATVSHQ--------------AKNGLTPLHLCAQEDKVNVATITMFNGAEI 733
            M   ++                       A N        A+      A +     A  
Sbjct: 121 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 180

Query: 734 DPVTKAGFTPLHIASHFGQLNMVRYLVE-NGANVNATTNLGYTPLHQASQQGRVLIIDLL 792
           D     G T LH A+    + +V+YLV   G+N +     G TP+  A+Q+GR+ ++  L
Sbjct: 181 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL 240

Query: 793 LGAGAQPNATTN 804
           +  GA   A   
Sbjct: 241 IQQGASVEAVDA 252

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 92.9 bits (229), Expect = 2e-21
 Identities = 47/325 (14%), Positives = 97/325 (29%), Gaps = 63/325 (19%)

Query: 3   QGHDRVVAVLLE---NDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTK 59
            G   +   +     N    +     LH  A     + +  L+                 
Sbjct: 11  AGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIV---------------- 54

Query: 60  LEVSLSNTKFEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGG 119
                             AK  +  GA +N    +  TPL +A       +V YL+  G 
Sbjct: 55  ----------------HEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGA 98

Query: 120 NQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDI 179
           + T+  +   + LH A       M+  +++               +              
Sbjct: 99  DPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTAL----------- 147

Query: 180 LIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGH 239
                        N       +++   E   +V     A  D       TALH A+   +
Sbjct: 148 --------MIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSN 199

Query: 240 VRVAK-TLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARA 298
           + + K  + ++ ++ + +  +G TP+ +A ++          + V   L+ + A   A  
Sbjct: 200 MPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE--------GRIEVVMYLIQQGASVEAVD 251

Query: 299 LNGFTPLHIACKKNRYKVVELLLKY 323
               T   +A   N + +V++  + 
Sbjct: 252 ATDHTARQLAQANNHHNIVDIFDRC 276

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 92.9 bits (229), Expect = 2e-21
 Identities = 50/291 (17%), Positives = 94/291 (32%), Gaps = 47/291 (16%)

Query: 336 TPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRN------ 389
           +P+ + +           +   +          T LH  A  +  +    L+ +      
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECI 61

Query: 390 --GASVDARAREDQTPL-------HVASRLRRFSSASQSALTRVRGETPLHLAARANQTD 440
             GA V+A   ++ TPL                 + +   +      + LH AA      
Sbjct: 62  AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFG 121

Query: 441 IVRILLRNGASVDAR--------------AREDQTPLHVASRLGNGDIASLLLQHGASVD 486
           ++  +L +                     A  +      +++L     A +     A  D
Sbjct: 122 MMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD 181

Query: 487 APTKDGYTALHISAKEGQ-DEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           +    G TALH +A+      V  ++ E G++     + G TP+ LAA+ GR+++   L+
Sbjct: 182 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLI 241

Query: 546 QKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 596
           Q+                 GAS+ A      T   LA       I  +  +
Sbjct: 242 QQ-----------------GASVEAVDATDHTARQLAQANNHHNIVDIFDR 275

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  127 bits (318), Expect = 5e-33
 Identities = 73/288 (25%), Positives = 121/288 (42%), Gaps = 17/288 (5%)

Query: 394 DARA-REDQTPLHVASRLRRFSSASQSALTRVR--GETPLHLAARANQTDIVRILLRNGA 450
           DA+  R +Q    + S         +   T+V+         A  +  T+ V  LL  GA
Sbjct: 5   DAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGA 64

Query: 451 SVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASI 510
            ++    +  T LH A    N D+   L+++GA+++ P  +G+  LH +A  G  ++A  
Sbjct: 65  DINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEY 124

Query: 511 LTESGASITATTKKGFTPLHLAAK----------YGRMKIAQMLLQKDAPVDSQGKVASI 560
           L   GA + A   +G TPL +A +            R  +     +K+            
Sbjct: 125 LISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQW 184

Query: 561 LTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDH 620
           L     +     K G T LH+AA  G  ++ ++L+Q    V+ +  +G TPLH A+H+  
Sbjct: 185 LNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGK 244

Query: 621 QNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPN 668
           +    +L++      AV K G T   +A +    DI   L E   K N
Sbjct: 245 EEACRILVENLCDMEAVNKVGQTAFDVADE----DILGYLEELQKKQN 288

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  122 bits (305), Expect = 3e-31
 Identities = 63/294 (21%), Positives = 111/294 (37%), Gaps = 26/294 (8%)

Query: 102 AAQENHDGVVRYLLSKGGNQTLATEHN--------ITPLHVACKWGKVAMVELLISKGAN 153
           A Q+ ++ + R++ S+   +    +                AC  G    V  L+ +GA+
Sbjct: 6   AKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGAD 65

Query: 154 IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVL 213
           I     DGLT LH A    + +++  L+E GA +      G  PLH A+   +      L
Sbjct: 66  INYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYL 125

Query: 214 IYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRY 273
           I  GA V  +  +  T L +A       + +  ++R+               +  +  R 
Sbjct: 126 ISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ--------------GVDIEAARK 171

Query: 274 KSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTES 333
           +          + L     +    A +G T LH+A  K   +V++LL++    +      
Sbjct: 172 EEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYD 231

Query: 334 GLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILL 387
           G TPLH A+  G       L++     +     G+T   +A      DI+  L 
Sbjct: 232 GWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE----DILGYLE 281

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  119 bits (297), Expect = 3e-30
 Identities = 63/274 (22%), Positives = 102/274 (37%), Gaps = 27/274 (9%)

Query: 527 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYG 586
                A   G  +    LL                 E GA I      G T LH A    
Sbjct: 42  AVFLAACSSGDTEEVLRLL-----------------ERGADINYANVDGLTALHQACIDD 84

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLH 646
            + + + L++  A ++     G  PLH A+   + ++A  L+ +GA   AV   G TPL 
Sbjct: 85  NVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLD 144

Query: 647 IAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKN 706
           IA ++   ++         + N +            +    D    L          AK+
Sbjct: 145 IAEEEAMEEL------LQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKS 198

Query: 707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
           G T LH+ A +    V  + +    +++     G+TPLH A+H+G+    R LVEN  ++
Sbjct: 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258

Query: 767 NATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
            A   +G T    A +     I+  L     + N
Sbjct: 259 EAVNKVGQTAFDVADED----ILGYLEELQKKQN 288

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  115 bits (288), Expect = 4e-29
 Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 14/250 (5%)

Query: 160 DGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAG 219
           D       A  SG    +  L+E+GA +     +GL  LH A   D+    + L+ +GA 
Sbjct: 39  DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGAN 98

Query: 220 VDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCN 279
           +++   +    LH A+ CG++ +A+ L+ + A   A    G TPL IA ++   +     
Sbjct: 99  INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158

Query: 280 HVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLH 339
                          N + ++         +       + L     +     +SG T LH
Sbjct: 159 V--------------NRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALH 204

Query: 340 VASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARARE 399
           VA+  G   +   L+QA    +     G TPLH AA   + +  RIL+ N   ++A  + 
Sbjct: 205 VAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKV 264

Query: 400 DQTPLHVASR 409
            QT   VA  
Sbjct: 265 GQTAFDVADE 274

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  114 bits (286), Expect = 9e-29
 Identities = 62/256 (24%), Positives = 117/256 (45%), Gaps = 9/256 (3%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVE 318
           +       AC                  LL+R AD N   ++G T LH AC  +   +V+
Sbjct: 39  DDGAVFLAACSSG--------DTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVK 90

Query: 319 LLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN 378
            L++ GA+I      G  PLH A+  G ++IA +L+  GA        G+TPL +A    
Sbjct: 91  FLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEA 150

Query: 379 QTDIVRILL-RNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARAN 437
             ++++  + R G  ++A  +E++  +   +R    S           G T LH+AA   
Sbjct: 151 MEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKG 210

Query: 438 QTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALH 497
            T+++++L++    V+ +  +  TPLH A+  G  +   +L+++   ++A  K G TA  
Sbjct: 211 YTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFD 270

Query: 498 ISAKEGQDEVASILTE 513
           ++ ++    +  +  +
Sbjct: 271 VADEDILGYLEELQKK 286

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  112 bits (279), Expect = 8e-28
 Identities = 67/236 (28%), Positives = 96/236 (40%), Gaps = 1/236 (0%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA 359
           +       AC     + V  LL+ GA I      GLT LH A     +++  FL++ GA 
Sbjct: 39  DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGAN 98

Query: 360 PDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHV-ASRLRRFSSASQ 418
            +     G  PLH AA     DI   L+  GA V A   E  TPL +           ++
Sbjct: 99  INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158

Query: 419 SALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLL 478
                V  E       R    D  + L     +    A+   T LHVA+  G  ++  LL
Sbjct: 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218

Query: 479 LQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAK 534
           +Q    V+    DG+T LH +A  G++E   IL E+   + A  K G T   +A +
Sbjct: 219 IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE 274

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  106 bits (265), Expect = 6e-26
 Identities = 54/227 (23%), Positives = 87/227 (38%), Gaps = 27/227 (11%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G  E    L++ GA IN  +++G T L+ A  +++  +V++L+  G N          PL
Sbjct: 51  GDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPL 110

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDN----------------- 175
           H A   G + + E LIS+GA++ A   +G TPL  A     +                  
Sbjct: 111 HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAAR 170

Query: 176 ----------VIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITV 225
                         L           K+G   LH+A+   +    ++LI     V+    
Sbjct: 171 KEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDY 230

Query: 226 DYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNR 272
           D  T LH A+H G     + L++   D  A    G T   +A +   
Sbjct: 231 DGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDIL 277

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  103 bits (256), Expect = 7e-25
 Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 8/229 (3%)

Query: 577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA 636
                A   G  +    LL++ A ++    +G+T LH A   D+ ++   L++ GA+ + 
Sbjct: 42  AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQ 101

Query: 637 VAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLI-E 695
               G+ PLH AA    +DIA  L+   A   A +  G TPL ++ +E   ++    +  
Sbjct: 102 PDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNR 161

Query: 696 HGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNM 755
            G  +    K     +   A+                     K+G T LH+A+  G   +
Sbjct: 162 QGVDIEAARKEEERIMLRDAR-------QWLNSGHINDVRHAKSGGTALHVAAAKGYTEV 214

Query: 756 VRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN 804
           ++ L++   +VN     G+TPLH A+  G+     +L+       A   
Sbjct: 215 LKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNK 263

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 79.8 bits (195), Expect = 8e-17
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 4/102 (3%)

Query: 81  LVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGK 140
           L          + +G T L++AA + +  V++ L+    +  +      TPLH A  WGK
Sbjct: 185 LNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGK 244

Query: 141 VAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIE 182
                +L+    ++EA  + G T    A      +++  L E
Sbjct: 245 EEACRILVENLCDMEAVNKVGQTAFDVADE----DILGYLEE 282

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 60.9 bits (146), Expect = 1e-10
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 2/82 (2%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G  EV K+L+     +N++  +G+TPL+ AA    +   R L+    +     +   T  
Sbjct: 210 GYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAF 269

Query: 133 HVACKWGKVAMVELLISKGANI 154
            VA +     + EL   K  N+
Sbjct: 270 DVADEDILGYLEELQ--KKQNL 289

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 53.2 bits (126), Expect = 4e-08
 Identities = 20/68 (29%), Positives = 26/68 (38%)

Query: 742 TPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA 801
                A   G    V  L+E GA++N     G T LHQA     V ++  L+  GA  N 
Sbjct: 42  AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQ 101

Query: 802 TTNLFCCA 809
             N     
Sbjct: 102 PDNEGWIP 109

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  123 bits (309), Expect = 4e-32
 Identities = 66/245 (26%), Positives = 91/245 (37%), Gaps = 10/245 (4%)

Query: 157 KTRDGLTPLHCAARSGHDNVIDILIEKGA---ALYSKTKNGLAPLHMASQGDHEAATRVL 213
            T DG T LH A    H+  +D L+   A    L  +   G   LH+A+     +    L
Sbjct: 5   VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64

Query: 214 IYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNR- 272
              GAGV        TALH+A        A  LL  +      A + +      C  +  
Sbjct: 65  YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTS 124

Query: 273 -----YKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASI 327
                  S             D +    A   +G TPLH+A      ++V LL   GA +
Sbjct: 125 HAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL 184

Query: 328 AA-TTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRIL 386
                  G TPLH+A      ++   LL+AGA P      G TPL  A       + R+L
Sbjct: 185 NKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLL 244

Query: 387 LRNGA 391
             +GA
Sbjct: 245 RAHGA 249

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  122 bits (306), Expect = 9e-32
 Identities = 54/245 (22%), Positives = 86/245 (35%), Gaps = 18/245 (7%)

Query: 572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAP---VDSQGKNGVTPLHVASHYDHQNVALLLL 628
           T+ G T LHLA  +        LL   A    +D Q   G T LH+A+     +    L 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 629 DRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTP----------- 677
             GA      + G+T LH+A +      A  LL+       ++   +             
Sbjct: 66  AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSH 125

Query: 678 ---LHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM-FNGAEI 733
                 S      +      +    +  +  +G TPLH+        +  +         
Sbjct: 126 APAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN 185

Query: 734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL 793
            P    G TPLH+A      +++  L++ GA+  A    G TPL  A  +   ++  LL 
Sbjct: 186 KPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLR 245

Query: 794 GAGAQ 798
             GA 
Sbjct: 246 AHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  122 bits (306), Expect = 1e-31
 Identities = 58/254 (22%), Positives = 82/254 (32%), Gaps = 24/254 (9%)

Query: 125 TEHNITPLHVACKWGKVAMVELLISKGAN---IEAKTRDGLTPLHCAARSGHDNVIDILI 181
           TE   T LH+A        ++ L+   A    ++ +   G T LH AA  G  + ++ L 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 182 EKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLT------------ 229
             GA +    + G   LH+A +        VL+           D               
Sbjct: 66  AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSH 125

Query: 230 --ALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTL 287
             A   +             D +    A   +G TPLH+A      +             
Sbjct: 126 APAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDA----- 180

Query: 288 LDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCM 347
                        G TPLH+A +     V+ELLLK GA   A    G TPL  A      
Sbjct: 181 --GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP 238

Query: 348 NIAIFLLQAGAAPD 361
            +A  L   GA   
Sbjct: 239 ILARLLRAHGAPEP 252

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  119 bits (299), Expect = 9e-31
 Identities = 63/260 (24%), Positives = 99/260 (38%), Gaps = 16/260 (6%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKYGAS---IAATTESGLTPLHVASFMGCMNIAIFLLQA 356
           +G T LH+A        ++ LL + A    +    + G T LH+A+ +G  +    L  A
Sbjct: 8   DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA 67

Query: 357 GAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSA 416
           GA    A   G T LHLA R        +LL+   S    A +             + + 
Sbjct: 68  GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASD------------TYLTQ 115

Query: 417 SQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIAS 476
           SQ              +    + +           ++A   +  TPLHVA    + ++  
Sbjct: 116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVR 175

Query: 477 LLLQHGASVDA-PTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKY 535
           LL   GA ++      G T LH++ +     V  +L ++GA  TA    G TPL  A   
Sbjct: 176 LLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLR 235

Query: 536 GRMKIAQMLLQKDAPVDSQG 555
               +A++L    AP    G
Sbjct: 236 PNPILARLLRAHGAPEPEDG 255

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  115 bits (287), Expect = 3e-29
 Identities = 65/282 (23%), Positives = 93/282 (32%), Gaps = 43/282 (15%)

Query: 223 ITVDYLTALHVASHCGHVRVAKTLLDRKADP---NARALNGFTPLHIACKKNRYKSSHCN 279
           +T D  TALH+A    H      LL   A     + +   G T LH+A       +    
Sbjct: 5   VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64

Query: 280 HVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLH 339
           +           A        G T LH+AC+   +    +LL+   S             
Sbjct: 65  YAA--------GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS 116

Query: 340 VASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARAN-QTDIVRILLRNGASVDARAR 398
                               PDT       P  + ++ N + +           ++A   
Sbjct: 117 ----------------QDCTPDT----SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY 156

Query: 399 EDQTPLHVASRLRRFSSASQSA--------LTRVRGETPLHLAARANQTDIVRILLRNGA 450
           +  TPLHVA   +                      G TPLHLA  A    ++ +LL+ GA
Sbjct: 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA 216

Query: 451 SVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDG 492
              AR    +TPL  A    N  +A LL  HGA      +DG
Sbjct: 217 DPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP---EDG 255

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  104 bits (260), Expect = 1e-25
 Identities = 59/264 (22%), Positives = 94/264 (35%), Gaps = 42/264 (15%)

Query: 367 GETPLHLAARANQTDIVRILLRNGAS---VDARAREDQTPLHVASR-------LRRFSSA 416
           G+T LHLA        +  LL   A    +D +    QT LH+A+         + +++ 
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68

Query: 417 SQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARARE--------------DQTP 462
           +   +    G T LHLA R        +LL+   S    A +                  
Sbjct: 69  AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA 128

Query: 463 LHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITA-T 521
              +      +           ++A   DG+T LH++      E+  +L ++GA +    
Sbjct: 129 AVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPE 188

Query: 522 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHL 581
              G TPLHLA +     + ++LL+                  GA  TA    G TPL  
Sbjct: 189 PTCGRTPLHLAVEAQAASVLELLLKA-----------------GADPTARMYGGRTPLGS 231

Query: 582 AAKYGRMKIAQMLLQKDAPVDSQG 605
           A       +A++L    AP    G
Sbjct: 232 ALLRPNPILARLLRAHGAPEPEDG 255

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  100 bits (250), Expect = 2e-24
 Identities = 64/264 (24%), Positives = 91/264 (34%), Gaps = 35/264 (13%)

Query: 489 TKDGYTALHISAKEGQDEVASILTESGAS---ITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           T+DG TALH++     +     L    A    +      G T LHLAA  G     + L 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 546 QKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDA------ 599
              A V                     + G T LHLA +      A +LLQ         
Sbjct: 66  AAGAGVLVA-----------------ERGGHTALHLACRVRAHTCACVLLQPRPSHPRDA 108

Query: 600 -------PVDSQGKNGVTPLHVASHYDHQN-VALLLLDRGASPHAVAKNGYTPLHIAAKK 651
                    D        P  V S  + +N       D      A   +G+TPLH+A   
Sbjct: 109 SDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIH 168

Query: 652 NQMDIATTLLEYNAKPNA-ESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTP 710
              ++   L +  A  N  E   G TPLHL+ +     +  LL++ GA  + +   G TP
Sbjct: 169 KDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTP 228

Query: 711 LHLCAQEDKVNVATITMFNGAEID 734
           L          +A +   +GA   
Sbjct: 229 LGSALLRPNPILARLLRAHGAPEP 252

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 78.6 bits (192), Expect = 1e-16
 Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 8/169 (4%)

Query: 27  HIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEAT-------GQEEVAK 79
           H+A +      A +LL+   S+ +       T+ +    +T             + E   
Sbjct: 83  HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEP 142

Query: 80  ILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNI-TPLHVACKW 138
              D    +  ++ +G TPL++A       +VR L   G +          TPLH+A + 
Sbjct: 143 RDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEA 202

Query: 139 GKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAAL 187
              +++ELL+  GA+  A+   G TPL  A    +  +  +L   GA  
Sbjct: 203 QAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPE 251

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 73.2 bits (178), Expect = 7e-15
 Identities = 41/231 (17%), Positives = 67/231 (29%), Gaps = 51/231 (22%)

Query: 73  GQEEVAKILVDNGA---TINVQSLNGFTPLYMAAQENH---------------------- 107
             E     L+   A    +++Q+  G T L++AA                          
Sbjct: 20  QHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGH 79

Query: 108 -----------DGVVRYLLSKGGNQT-------LATEHNITP-------LHVACKWGKVA 142
                            LL    +         L    + TP          +    +  
Sbjct: 80  TALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENE 139

Query: 143 MVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS-KTKNGLAPLHMA 201
                      +EA+  DG TPLH A       ++ +L + GA L   +   G  PLH+A
Sbjct: 140 EEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLA 199

Query: 202 SQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKAD 252
            +    +   +L+  GA          T L  A    +  +A+ L    A 
Sbjct: 200 VEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 70.5 bits (171), Expect = 5e-14
 Identities = 46/248 (18%), Positives = 70/248 (28%), Gaps = 64/248 (25%)

Query: 637 VAKNGYTPLHIAAKKNQMDIATTLLEYNAKP---NAESKAGFTPLHLSAQEGHTDMSSLL 693
           V ++G T LH+A           LL ++A     + ++  G T LHL+A  G       L
Sbjct: 5   VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64

Query: 694 IEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTP---------- 743
              GA V    + G T LHL  +      A + +             +            
Sbjct: 65  YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTS 124

Query: 744 ----LHIASHFGQLNMVRYLVENGANVNATTNLG-------------------------- 773
                  +    +        +    + A    G                          
Sbjct: 125 HAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL 184

Query: 774 --------YTPLHQASQQGRVLIIDLLLGAGAQPNATTN-----LFC--------CATIL 812
                    TPLH A +     +++LLL AGA P A        L           A +L
Sbjct: 185 NKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLL 244

Query: 813 VKNGAEID 820
             +GA   
Sbjct: 245 RAHGAPEP 252

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  108 bits (271), Expect = 9e-27
 Identities = 41/243 (16%), Positives = 91/243 (37%), Gaps = 12/243 (4%)

Query: 415 SASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARARED-QTPLHVASRLGNGD 473
           S+++++      +   H++  +   ++         +++    E   TPLH  + + N +
Sbjct: 62  SSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLE 121

Query: 474 IASLLLQHGASVDAPTKDGYTALHISAKEGQD----EVASILTESGASITATTKKGFTPL 529
           +   L++HG++       G + L  + K   +       ++L      +        T L
Sbjct: 122 LVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTIL 181

Query: 530 HLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMK 589
           H       M       +    +     +  I+ +    I + T +  +  +      +  
Sbjct: 182 HHIIITSGMTGCSAAAKYYLDIL----MGWIVKKQNRPIQSGTNEKESKPNDKNGERKDS 237

Query: 590 IAQMLLQK---DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLH 646
           I + L  K      +++Q  NG T L++A+   + ++   LLD GA P    K+G  P+ 
Sbjct: 238 ILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVD 297

Query: 647 IAA 649
             A
Sbjct: 298 FGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  107 bits (268), Expect = 3e-26
 Identities = 50/284 (17%), Positives = 84/284 (29%), Gaps = 24/284 (8%)

Query: 77  VAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQT-LATEHNITPLHVA 135
           + K L       N Q +     L          +   L +   N+       N    HV+
Sbjct: 21  IMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVS 80

Query: 136 CKWGKVAMVELLISKGANIEAKT-RDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNG 194
                  + +   +   N+       G TPLH      +  ++  L++ G+        G
Sbjct: 81  FDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMG 140

Query: 195 LAPLHMASQG----DHEAATRVLIYHGAGVDEITVDYLTALH----VASHCGHVRVAKTL 246
            + L  A +     D      +L Y    +        T LH     +   G    AK  
Sbjct: 141 ESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYY 200

Query: 247 LDRK---------ADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNAR 297
           LD               +      +  +    +        + +             NA+
Sbjct: 201 LDILMGWIVKKQNRPIQSGTNEKESKPNDKNGER-----KDSILENLDLKWIIANMLNAQ 255

Query: 298 ALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVA 341
             NG T L+IA +     +V+ LL YGA      +SGL P+   
Sbjct: 256 DSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  106 bits (264), Expect = 9e-26
 Identities = 42/298 (14%), Positives = 91/298 (30%), Gaps = 38/298 (12%)

Query: 423 RVRGETPLHLAARANQTDIVRILLRNGASVDARA-REDQTPLHVASRLGNGDIASLLLQH 481
           +++ E  L         ++   L  + ++ ++     +Q   HV+      ++       
Sbjct: 36  KMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNT 95

Query: 482 GASVDAPT-KDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKI 540
             +++ P  + G T LH        E+   L + G++       G + L  A K      
Sbjct: 96  QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYD 155

Query: 541 AQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAP 600
           +                 ++L      +        T LH       M            
Sbjct: 156 SGT-------------FEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCS-------- 194

Query: 601 VDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTL 660
                         A +Y    +  ++  +     +      +  +    + +  I   L
Sbjct: 195 ------------AAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENL 242

Query: 661 L---EYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCA 715
                     NA+   G T L+++A+ G+  +   L+++GA      K+GL P+   A
Sbjct: 243 DLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  105 bits (261), Expect = 2e-25
 Identities = 41/291 (14%), Positives = 84/291 (28%), Gaps = 22/291 (7%)

Query: 511 LTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITA 570
           LT    S      K      +     +MK+ +  LQ+    + Q    S+  +S    + 
Sbjct: 10  LTSDFLSSPLKIMKALPSPVVNDNEQKMKL-EAFLQRLLFPEIQEMPTSLNNDSSNRNSE 68

Query: 571 TTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG-KNGVTPLHVASHYDHQNVALLLLD 629
                    H++      ++          ++    ++G TPLH  +   +  +   L+ 
Sbjct: 69  GGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVK 128

Query: 630 RGASPHAVAKNGYTPLHIAAKKNQ----MDIATTLLEYNAKPNAESKAGFTPLHLSAQEG 685
            G++       G + L  A K             L         E     T LH      
Sbjct: 129 HGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITS 188

Query: 686 HTD------------MSSLLIEHGATVSHQAKNGLTPLHLCA----QEDKVNVATITMFN 729
                          +   +++          N             ++  +    +    
Sbjct: 189 GMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWII 248

Query: 730 GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQA 780
              ++     G T L+IA+  G +++V  L++ GA+       G  P+   
Sbjct: 249 ANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  102 bits (254), Expect = 2e-24
 Identities = 41/286 (14%), Positives = 80/286 (27%), Gaps = 24/286 (8%)

Query: 141 VAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKT-KNGLAPLH 199
           + +++ L S   N   +       L          +   L    +   S+   +     H
Sbjct: 19  LKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQH 78

Query: 200 MASQGDHEAATRVLIYHGAGVDEITVDY--LTALHVASHCGHVRVAKTLLDRKADPNARA 257
           ++     +            ++ I VD    T LH  +   ++ + K L+   ++     
Sbjct: 79  VSFDSLLQEVNDAFPNTQLNLN-IPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD 137

Query: 258 LNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYK-- 315
             G + L  A K       + +       L               T LH     +     
Sbjct: 138 NMGESCLVKAVKSVN----NYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGC 193

Query: 316 -----------VVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQ---AGAAPD 361
                      +  ++ K    I + T    +  +  +     +I   L          +
Sbjct: 194 SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN 253

Query: 362 TATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVA 407
                G+T L++AAR     IV  LL  GA      +    P+   
Sbjct: 254 AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 77.4 bits (189), Expect = 5e-16
 Identities = 44/274 (16%), Positives = 87/274 (31%), Gaps = 39/274 (14%)

Query: 12  LLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNT--KLEVSLSNTKLEVSLSNTKF 69
           L     +    L         +   +      VSF +   ++  +  NT+L +++   + 
Sbjct: 47  LFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEH 106

Query: 70  EAT--------GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDG----VVRYLLSK 117
             T           E+ K LV +G+        G + L  A +  ++         L   
Sbjct: 107 GNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYL 166

Query: 118 GGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI 177
                L    N T LH                           G+T    AA+   D ++
Sbjct: 167 YPCLILEDSMNRTILHHIIITS---------------------GMTGCSAAAKYYLDILM 205

Query: 178 DILIEKGAA-LYSKTKNGLAPLHMASQGDHEAATRVLIYH---GAGVDEITVDYLTALHV 233
             +++K    + S T    +  +  +    ++    L         ++    +  T L++
Sbjct: 206 GWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNI 265

Query: 234 ASHCGHVRVAKTLLDRKADPNARALNGFTPLHIA 267
           A+  G++ +   LLD  ADP     +G  P+   
Sbjct: 266 AARLGNISIVDALLDYGADPFIANKSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 68.5 bits (166), Expect = 4e-13
 Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 3/99 (3%)

Query: 74  QEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNI---T 130
              +  I+      I   +    +       E  D ++  L  K     +    +    T
Sbjct: 202 DILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDT 261

Query: 131 PLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAA 169
            L++A + G +++V+ L+  GA+     + GL P+   A
Sbjct: 262 CLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 11/68 (16%), Positives = 22/68 (32%), Gaps = 1/68 (1%)

Query: 742 TPLHIASHFGQLNMVRYLVENGANVNATT-NLGYTPLHQASQQGRVLIIDLLLGAGAQPN 800
              H++       +         N+N      G TPLH  +    + ++  L+  G+   
Sbjct: 75  QQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL 134

Query: 801 ATTNLFCC 808
              N+   
Sbjct: 135 YGDNMGES 142

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 1e-26
 Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 9/230 (3%)

Query: 160 DGLTPLHCAARSGHDNVIDILI----EKGAALYSKTKNGLAPLHMASQGDHEAATRVLIY 215
           DG TPLH A   G+   +  L+    + G  L         PLH+A      +  R+L+ 
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61

Query: 216 HGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKS 275
            GA    +     TA H+A         + LLD  A             +       + +
Sbjct: 62  AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGT----LDLEARNYDGLTALHVA 117

Query: 276 SHCNHVWVAKTLLDRKADPNARAL-NGFTPLHIACKKNRYKVVELLLKYGASIAATTESG 334
            +       + LL+R AD +A  + +G +PL  A + N   +V+LLL++GA++ A   SG
Sbjct: 118 VNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSG 177

Query: 335 LTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVR 384
            + LH AS  G + +   L+++GA         +TPL +A      DI+R
Sbjct: 178 SSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (256), Expect = 2e-25
 Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 9/224 (4%)

Query: 575 GFTPLHLAAKYGRMKIAQMLL----QKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDR 630
           G TPLH+A   G +     L+    Q    +D       TPLH+A      +V  LL+  
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62

Query: 631 GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKA----GFTPLHLSAQEGH 686
           GASP A+ ++G T  H+A +         LL+  A    + +A    G T LH++     
Sbjct: 63  GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 122

Query: 687 TDMSSLLIEHGA-TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLH 745
            +   LL+E GA   +   K+G +PL    + + +++  + + +GA ++    +G + LH
Sbjct: 123 QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALH 182

Query: 746 IASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLII 789
            AS  G L +VR LV +GA+ +       TPL  A  +  + I+
Sbjct: 183 SASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 2e-24
 Identities = 57/260 (21%), Positives = 99/260 (38%), Gaps = 40/260 (15%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN 153
           +G TPL++A  + +   V  L+                              L    G  
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRLV-----------------------------NLFQQGGRE 32

Query: 154 IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVL 213
           ++       TPLH A  +   +V+ +L+  GA+  +  ++G    H+A +       R L
Sbjct: 33  LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRAL 92

Query: 214 IYHGA----GVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACK 269
           +   A     ++    D LTALHVA +       + LL+R AD              + +
Sbjct: 93  LDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADI-------DAVDIKSGR 145

Query: 270 KNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAA 329
                +   N + + + LL   A+ NA+  +G + LH A  +    +V  L++ GA  + 
Sbjct: 146 SPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSL 205

Query: 330 TTESGLTPLHVASFMGCMNI 349
                 TPL VA     ++I
Sbjct: 206 KNCHNDTPLMVARSRRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.6 bits (241), Expect = 2e-23
 Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 18/238 (7%)

Query: 525 GFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK 584
           G TPLH+A   G +     L+             ++  + G  +        TPLHLA  
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLV-------------NLFQQGGRELDIYNNLRQTPLHLAVI 49

Query: 585 YGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAK----N 640
                + ++L+   A   +  ++G T  H+A  +        LLD  A      +    +
Sbjct: 50  TTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYD 109

Query: 641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFT-PLHLSAQEGHTDMSSLLIEHGAT 699
           G T LH+A      +    LLE  A  +A        PL  + +     M  LL++HGA 
Sbjct: 110 GLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN 169

Query: 700 VSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVR 757
           V+ Q  +G + LH  +    + +    + +GA+         TPL +A     ++++R
Sbjct: 170 VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.8 bits (239), Expect = 4e-23
 Identities = 58/224 (25%), Positives = 89/224 (39%), Gaps = 16/224 (7%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKY----GASIAATTESGLTPLHVASFMGCMNIAIFLLQ 355
           +G TPLHIA  +     V  L+      G  +        TPLH+A      ++   L+ 
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61

Query: 356 AGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAR----EDQTPLHVASRLR 411
           AGA+P      G+T  HLA        +R LL + A           +  T LHVA    
Sbjct: 62  AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 121

Query: 412 R--------FSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPL 463
                       A   A+    G +PL  A   N   +V++LL++GA+V+A+     + L
Sbjct: 122 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 181

Query: 464 HVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEV 507
           H AS  G   +   L++ GA          T L ++      ++
Sbjct: 182 HSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (215), Expect = 6e-20
 Identities = 69/227 (30%), Positives = 98/227 (43%), Gaps = 16/227 (7%)

Query: 332 ESGLTPLHVASFMGCMNIAIFLL----QAGAAPDTATVRGETPLHLAARANQTDIVRILL 387
           E G TPLH+A   G +     L+    Q G   D      +TPLHLA       +VR+L+
Sbjct: 1   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV 60

Query: 388 RNGASVDARAREDQTPLHVASRLRRFS-----------SASQSALTRVRGETPLHLAARA 436
             GAS  A  R  QT  H+A   R  +                      G T LH+A   
Sbjct: 61  TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNT 120

Query: 437 NQTDIVRILLRNGASVDARARED-QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTA 495
              + V++LL  GA +DA   +  ++PL  A    +  +  LLLQHGA+V+A    G +A
Sbjct: 121 ECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSA 180

Query: 496 LHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQ 542
           LH ++  G   +   L  SGA  +       TPL +A     + I +
Sbjct: 181 LHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.8 bits (213), Expect = 1e-19
 Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 25/223 (11%)

Query: 426 GETPLHLAARANQTDIVRILL----RNGASVDARAREDQTPLHVASRLGNGDIASLLLQH 481
           G+TPLH+A        V  L+    + G  +D      QTPLH+A       +  LL+  
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62

Query: 482 GASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTK----KGFTPLHLAAKYGR 537
           GAS  A  + G TA H++ +         L +S A  T   +     G T LH+A     
Sbjct: 63  GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 122

Query: 538 MKIAQMLLQKD-----------------APVDSQGKVASILTESGASITATTKKGFTPLH 580
            +  Q+LL++                  A  ++   +  +L + GA++ A    G + LH
Sbjct: 123 QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALH 182

Query: 581 LAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNV 623
            A+  G + + + L++  A    +  +  TPL VA      ++
Sbjct: 183 SASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.8 bits (200), Expect = 4e-18
 Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 9/207 (4%)

Query: 607 NGVTPLHVASHYDHQNVALLLLD----RGASPHAVAKNGYTPLHIAAKKNQMDIATTLLE 662
           +G TPLH+A    +      L++     G           TPLH+A       +   L+ 
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61

Query: 663 YNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAK----NGLTPLHLCAQED 718
             A P A  + G T  HL+ +         L++  A  +   +    +GLT LH+    +
Sbjct: 62  AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 121

Query: 719 KVNVATITMFNGAEIDPVTKAGFT-PLHIASHFGQLNMVRYLVENGANVNATTNLGYTPL 777
                 + +  GA+ID V       PL  A     L+MV+ L+++GANVNA    G + L
Sbjct: 122 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 181

Query: 778 HQASQQGRVLIIDLLLGAGAQPNATTN 804
           H AS +G + ++  L+ +GA  +    
Sbjct: 182 HSASGRGLLPLVRTLVRSGADSSLKNC 208

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (172), Expect = 2e-14
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN 153
           +G +PL  A + N   +V+ LL  G N         + LH A   G + +V  L+  GA+
Sbjct: 143 SGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD 202

Query: 154 IEAKTRDGLTPLHCAARSGHDNVI 177
              K     TPL  A      +++
Sbjct: 203 SSLKNCHNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (163), Expect = 3e-13
 Identities = 40/214 (18%), Positives = 71/214 (33%), Gaps = 42/214 (19%)

Query: 73  GQEEVAKILVD----NGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHN 128
           G       LV+     G  +++ +    TPL++A       VVR L++ G +      H 
Sbjct: 14  GNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHG 73

Query: 129 ITPLHVACKWGKVAMVE--------------------------------------LLISK 150
            T  H+AC+      +                                       LL   
Sbjct: 74  QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG 133

Query: 151 GANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAAT 210
                   + G +PL  A  +   +++ +L++ GA + ++  +G + LH AS        
Sbjct: 134 ADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLV 193

Query: 211 RVLIYHGAGVDEITVDYLTALHVASHCGHVRVAK 244
           R L+  GA          T L VA     + + +
Sbjct: 194 RTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (107), Expect = 5e-06
 Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 4/107 (3%)

Query: 706 NGLTPLHLCAQEDKVNVA----TITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE 761
           +G TPLH+   +  +        +    G E+D       TPLH+A      ++VR LV 
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61

Query: 762 NGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC 808
            GA+  A    G T  H A +      +  LL + A           
Sbjct: 62  AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY 108

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  104 bits (258), Expect = 1e-25
 Identities = 52/236 (22%), Positives = 78/236 (33%), Gaps = 17/236 (7%)

Query: 130 TPLHVACKWGKVAMV-ELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALY 188
            PLH AC   +   V ELL SK + +  K +DG  PLH +       +   L+ K   + 
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 189 SKTKNGLAPLHMASQGDHEAATRVLIY-----HGAGVDEITVDYLTALHVASHCGHVRVA 243
                  +               V+           +++IT   +T LH+A       V+
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 244 KTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFT 303
           + L++  A    +      PLH A      K                K+  N +   G+T
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL-------GKSAVNWQDKQGWT 174

Query: 304 PLHIACKKNRYKVVELLL-KYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGA 358
           PL  A  +       LL+ KYGA        G     VA       +  F L    
Sbjct: 175 PLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVV 227

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 94.9 bits (234), Expect = 1e-22
 Identities = 51/246 (20%), Positives = 82/246 (33%), Gaps = 26/246 (10%)

Query: 527 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYG 586
            PLH A         Q LL                    + +    + G  PLH +  + 
Sbjct: 2   YPLHQACMENEFFKVQELLHSK----------------PSLLLQKDQDGRIPLHWSVSFQ 45

Query: 587 RMKIAQMLLQK-----DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNG 641
             +I   LL K                   +  +        +L         + +   G
Sbjct: 46  AHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQG 105

Query: 642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGAT-V 700
            T LH+A  K   +++  L+E  A    + K    PLH +A  G   +  LL   G + V
Sbjct: 106 VTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAV 165

Query: 701 SHQAKNGLTPLHLCAQEDKVNVATITMFN-GAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
           + Q K G TPL     E   + A + +   GAE D V   G     +A +     + ++ 
Sbjct: 166 NWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFF 222

Query: 760 VENGAN 765
           + N  +
Sbjct: 223 LNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 91.4 bits (225), Expect = 3e-21
 Identities = 48/241 (19%), Positives = 81/241 (33%), Gaps = 18/241 (7%)

Query: 461 TPLHVASRLGNGD-IASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASIT 519
            PLH A        +  LL    + +    +DG   LH S      E+ S L     ++ 
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPL 579
                  +          +   +++                       +   T +G T L
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKP------------DLNKITNQGVTCL 109

Query: 580 HLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASP-HAVA 638
           HLA      +++Q L++  A V  + K    PLH A+      +  LL   G S  +   
Sbjct: 110 HLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQD 169

Query: 639 KNGYTPLHIAAKKNQMDIATTLLE-YNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHG 697
           K G+TPL  A  +   D A  L+E Y A+ +     G     ++  E    +    + + 
Sbjct: 170 KQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLNNV 226

Query: 698 A 698
            
Sbjct: 227 V 227

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 87.6 bits (215), Expect = 6e-20
 Identities = 49/229 (21%), Positives = 76/229 (33%), Gaps = 44/229 (19%)

Query: 610 TPLHVASHYDH-QNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEY----- 663
            PLH A   +    V  LL  + +      ++G  PLH +      +I + LL       
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 664 ---------------------------------NAKPNAESKAGFTPLHLSAQEGHTDMS 690
                                                N  +  G T LHL+  +   ++S
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 691 SLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNG-AEIDPVTKAGFTPLHIASH 749
             LIE+GA+V  + K    PLH  A    + +  +    G + ++   K G+TPL  A  
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 181

Query: 750 FGQLNMVRYLVEN-GANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA 797
            G  +    LVE  GA  +   N G      A  +    +    L    
Sbjct: 182 EGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQ---VKKFFLNNVV 227

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 86.8 bits (213), Expect = 9e-20
 Identities = 52/241 (21%), Positives = 85/241 (35%), Gaps = 18/241 (7%)

Query: 428 TPLHLAARANQTDIVRILL-RNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVD 486
            PLH A   N+   V+ LL    + +  + ++ + PLH +      +I S LL    +V+
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 487 APTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
                  +                             K      L     ++    +   
Sbjct: 62  LDDYPDDSGWTPFHIACS------------VGNLEVVKSLYDRPLKPDLNKITNQGVTCL 109

Query: 547 KDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAP-VDSQG 605
             A      +V+  L E+GAS+    K    PLH AA  G +K+ ++L       V+ Q 
Sbjct: 110 HLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQD 169

Query: 606 KNGVTPLHVASHYDHQNVALLLLDR-GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN 664
           K G TPL  A    H + A+LL+++ GA    V   G     +A  +    +    L   
Sbjct: 170 KQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLNNV 226

Query: 665 A 665
            
Sbjct: 227 V 227

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 83.7 bits (205), Expect = 1e-18
 Identities = 56/250 (22%), Positives = 89/250 (35%), Gaps = 27/250 (10%)

Query: 303 TPLHIACKKNRYKVVELLLK-YGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPD 361
            PLH AC +N +  V+ LL    + +    + G  PLH +       I  FLL      +
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 362 TATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSAL 421
                 ++       A     + ++               T                   
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQG---------------- 105

Query: 422 TRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQH 481
                 T LHLA      ++ + L+ NGASV  + + +Q PLH A+ +G+  +  LL   
Sbjct: 106 -----VTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL 160

Query: 482 GAS-VDAPTKDGYTALHISAKEGQDEVASILTES-GASITATTKKGFTPLHLAAKYGRMK 539
           G S V+   K G+T L  +  EG  + A +L E  GA       KG     +A      +
Sbjct: 161 GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---Q 217

Query: 540 IAQMLLQKDA 549
           + +  L    
Sbjct: 218 VKKFFLNNVV 227

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 83.7 bits (205), Expect = 1e-18
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 19/237 (8%)

Query: 97  TPLYMAAQENHDGVVRYLLSKGGNQTLAT-EHNITPLHVACKWGKVAMVELLISKGANIE 155
            PL+ A  EN    V+ LL    +  L   +    PLH +  +    +   L+SK  N+ 
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 156 AKTRDGLTPLHCAARSGHDNVIDILIEKGAA-----LYSKTKNGLAPLHMASQGDHEAAT 210
                  +       +     ++++           L   T  G+  LH+A        +
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 211 RVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR-KADPNARALNGFTPLHIACK 269
           + LI +GA V          LH A+  G +++ + L    K+  N +   G+TPL  A  
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 181

Query: 270 KNRYKSSHCNHVWVAKTLLDRK-ADPNARALNGFTPLHIACKKNRYKVVELLLKYGA 325
           +         H   A  L+++  A+ +     G     +A  +    V +  L    
Sbjct: 182 E--------GHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQ---VKKFFLNNVV 227

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 81.8 bits (200), Expect = 6e-18
 Identities = 44/245 (17%), Positives = 82/245 (33%), Gaps = 33/245 (13%)

Query: 369 TPLHLAARANQTDIVRILL-RNGASVDARAREDQTPLHVASRLRR------------FSS 415
            PLH A   N+   V+ LL    + +  + ++ + PLH +   +               +
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 416 ASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIA 475
                         +  +    +             ++    +  T LH+A      +++
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 476 SLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGAS-ITATTKKGFTPLHLAAK 534
             L+++GASV    K     LH +A  G  ++  +L   G S +    K+G+TPL  A  
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 181

Query: 535 YGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 594
            G    A +L++K                 GA       KG     +A      ++ +  
Sbjct: 182 EGHGDAAVLLVEK----------------YGAEYDLVDNKGAKAEDVALNE---QVKKFF 222

Query: 595 LQKDA 599
           L    
Sbjct: 223 LNNVV 227

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 80.2 bits (196), Expect = 2e-17
 Identities = 49/226 (21%), Positives = 81/226 (35%), Gaps = 18/226 (7%)

Query: 75  EEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHV 134
            +V ++L    + +  +  +G  PL+ +       +  +LLSK  N  L    + +    
Sbjct: 14  FKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTP 73

Query: 135 ACKWGKVAMVELLISKGAN-----IEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
                 V  +E++ S         +   T  G+T LH A       V   LIE GA++  
Sbjct: 74  FHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRI 133

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHG-AGVDEITVDYLTALHVASHCGHVRVAKTLLD 248
           K K    PLH A+         +L   G + V+       T L  A   GH   A  L++
Sbjct: 134 KDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVE 193

Query: 249 RK-ADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKAD 293
           +  A+ +     G     +A  +            V K  L+   D
Sbjct: 194 KYGAEYDLVDNKGAKAEDVALNEQ-----------VKKFFLNNVVD 228

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 97.2 bits (240), Expect = 2e-23
 Identities = 47/246 (19%), Positives = 82/246 (33%), Gaps = 43/246 (17%)

Query: 143 MVELLISKGANIEAKT-RDGLTPLHCAARSGHDNVIDILI-EKGAALYSKTKNGLAPLHM 200
           ++  L+++GA + A   + G T LH AAR    +    L+     A              
Sbjct: 4   VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63

Query: 201 ASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNG 260
            +         +L      ++    D  T L +A+      + + L+   AD NA   +G
Sbjct: 64  VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSG 123

Query: 261 FTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELL 320
            T LH A   N  ++ +   +          A+ +A+     TPL +A ++  Y+  + L
Sbjct: 124 KTALHWAAAVNNTEAVNILLMH--------HANRDAQDDKDETPLFLAAREGSYEASKAL 175

Query: 321 LKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQT 380
           L   A+   T                                       P  +A+     
Sbjct: 176 LDNFANREITDHMD---------------------------------RLPRDVASERLHH 202

Query: 381 DIVRIL 386
           DIVR+L
Sbjct: 203 DIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 95.2 bits (235), Expect = 8e-23
 Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 2/206 (0%)

Query: 589 KIAQMLLQKDAPVDSQG-KNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHI 647
           ++   LL + A +++   K G T LH+A+ +   + A  LLD GA  ++    G TPLH 
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 648 AAKKNQMDIATTLLEYNAKPNAESKAGF-TPLHLSAQEGHTDMSSLLIEHGATVSHQAKN 706
           A   + M +   LL   A           TPL L+A+     M   LI   A ++    +
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV 766
           G T LH  A  +      I + + A  D       TPL +A+  G     + L++N AN 
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 182

Query: 767 NATTNLGYTPLHQASQQGRVLIIDLL 792
             T ++   P   AS++    I+ LL
Sbjct: 183 EITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 91.4 bits (225), Expect = 2e-21
 Identities = 56/207 (27%), Positives = 85/207 (41%), Gaps = 19/207 (9%)

Query: 474 IASLLLQHGASVDAPT-KDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLA 532
           + S LL  GA ++A   K G T+LH++A+  + + A  L ++GA   +    G TPLH A
Sbjct: 4   VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63

Query: 533 AKYGRMKIAQMLLQKDAPVDSQGKVA-----------------SILTESGASITATTKKG 575
                M + Q+LL+  A   +                        L  + A I A    G
Sbjct: 64  VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSG 123

Query: 576 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPH 635
            T LH AA     +   +LL   A  D+Q     TPL +A+       +  LLD  A+  
Sbjct: 124 KTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANRE 183

Query: 636 AVAKNGYTPLHIAAKKNQMDIATTLLE 662
                   P  +A+++   DI   LL+
Sbjct: 184 ITDHMDRLPRDVASERLHHDIV-RLLD 209

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 89.8 bits (221), Expect = 6e-21
 Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 2/201 (0%)

Query: 76  EVAKILVDNGATINVQS-LNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHV 134
           +V   L+  GA +N      G T L++AA+       + LL  G +         TPLH 
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 135 ACKWGKVAMVELLISK-GANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKN 193
           A     + + ++L+     N+ A+  DG TPL  AAR   + +++ LI   A + +   +
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 194 GLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADP 253
           G   LH A+  ++  A  +L+ H A  D       T L +A+  G    +K LLD  A+ 
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 182

Query: 254 NARALNGFTPLHIACKKNRYK 274
                    P  +A ++  + 
Sbjct: 183 EITDHMDRLPRDVASERLHHD 203

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 88.7 bits (218), Expect = 2e-20
 Identities = 66/206 (32%), Positives = 94/206 (45%), Gaps = 2/206 (0%)

Query: 556 KVASILTESGASITATT-KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHV 614
           +V S L   GA + AT  K G T LHLAA++ R   A+ LL   A  +SQ   G TPLH 
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 615 ASHYDHQNVALLLLDRGASPHAVAKNGY-TPLHIAAKKNQMDIATTLLEYNAKPNAESKA 673
           A   D   V  +LL   A+      +   TPL +AA+     +   L+  +A  NA   +
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEI 733
           G T LH +A   +T+  ++L+ H A    Q     TPL L A+E     +   + N A  
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 182

Query: 734 DPVTKAGFTPLHIASHFGQLNMVRYL 759
           +        P  +AS     ++VR L
Sbjct: 183 EITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 84.5 bits (207), Expect = 4e-19
 Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 9/205 (4%)

Query: 349 IAIFLLQAGAAPD-TATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVA 407
           +   LL  GA  + T    GET LHLAAR  + D  + LL  GA  +++    +TPLH A
Sbjct: 4   VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63

Query: 408 SR--------LRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARARED 459
                     +   + A+        G TPL LAAR     +V  L+   A ++A     
Sbjct: 64  VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSG 123

Query: 460 QTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASIT 519
           +T LH A+ + N +  ++LL H A+ DA      T L ++A+EG  E +  L ++ A+  
Sbjct: 124 KTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANRE 183

Query: 520 ATTKKGFTPLHLAAKYGRMKIAQML 544
            T      P  +A++     I ++L
Sbjct: 184 ITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 80.6 bits (197), Expect = 9e-18
 Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 8/200 (4%)

Query: 211 RVLIYHGAGVDEITVDY-LTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACK 269
             L+  GA ++        T+LH+A+       AK LLD  AD N++   G TPLH A  
Sbjct: 6   SDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVA 65

Query: 270 KNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAA 329
            +                  R  + NAR  +G TPL +A +     +VE L+   A I A
Sbjct: 66  ADAMGVFQILLRN-------RATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINA 118

Query: 330 TTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRN 389
              SG T LH A+ +        LL   A  D    + ETPL LAAR    +  + LL N
Sbjct: 119 ADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDN 178

Query: 390 GASVDARAREDQTPLHVASR 409
            A+ +     D+ P  VAS 
Sbjct: 179 FANREITDHMDRLPRDVASE 198

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 77.5 bits (189), Expect = 9e-17
 Identities = 27/102 (26%), Positives = 44/102 (43%)

Query: 79  KILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKW 138
           + L+   A IN    +G T L+ AA  N+   V  LL    N+    + + TPL +A + 
Sbjct: 107 EDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAARE 166

Query: 139 GKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDIL 180
           G     + L+   AN E        P   A+   H +++ +L
Sbjct: 167 GSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 77.1 bits (188), Expect = 1e-16
 Identities = 52/230 (22%), Positives = 87/230 (37%), Gaps = 42/230 (18%)

Query: 382 IVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDI 441
           ++  LL  GA ++A   +                          GET LHLAAR  + D 
Sbjct: 4   VISDLLAQGAELNATMDKT-------------------------GETSLHLAARFARADA 38

Query: 442 VRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGY-TALHISA 500
            + LL  GA  +++    +TPLH A       +  +LL++ A+          T L ++A
Sbjct: 39  AKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAA 98

Query: 501 KEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG----- 555
           +   + +   L  + A I A    G T LH AA     +   +LL   A  D+Q      
Sbjct: 99  RLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDET 158

Query: 556 -----------KVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQML 594
                      + +  L ++ A+   T      P  +A++     I ++L
Sbjct: 159 PLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 71.4 bits (173), Expect = 1e-14
 Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 2/181 (1%)

Query: 626 LLLDRGASPHAVA-KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQE 684
            LL +GA  +A   K G T LH+AA+  + D A  LL+  A  N++   G TPLH +   
Sbjct: 7   DLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAA 66

Query: 685 GHTDMSSLLIEH-GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTP 743
               +  +L+ +    ++ +  +G TPL L A+     +    +   A+I+    +G T 
Sbjct: 67  DAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTA 126

Query: 744 LHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATT 803
           LH A+       V  L+ + AN +A  +   TPL  A+++G       LL   A    T 
Sbjct: 127 LHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITD 186

Query: 804 N 804
           +
Sbjct: 187 H 187

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.4 bits (230), Expect = 5e-22
 Identities = 43/208 (20%), Positives = 78/208 (37%), Gaps = 19/208 (9%)

Query: 130 TPLHVACKWGKVA----MVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGA 185
           + LH+A    + A    ++  +    A +  +     TPLH A  +    + + L+  G 
Sbjct: 4   SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 63

Query: 186 ALYSKTKNGLAPLHMASQGDHEAATRVLIYHGA------GVDEITVDYLTALHVASHCGH 239
               +   G  PLH+A +    A+  VL            +     +  T LH+AS  G+
Sbjct: 64  DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY 123

Query: 240 VRVAKTLLDRKAD-PNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARA 298
           + + + L+   AD       NG T LH+A            +  +   LL   AD N   
Sbjct: 124 LGIVELLVSLGADVNAQEPCNGRTALHLAV--------DLQNPDLVSLLLKCGADVNRVT 175

Query: 299 LNGFTPLHIACKKNRYKVVELLLKYGAS 326
             G++P  +   +   ++ + L +    
Sbjct: 176 YQGYSPYQLTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.3 bits (222), Expect = 5e-21
 Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 11/202 (5%)

Query: 575 GFTPLHLAAKYGR----MKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDR 630
           G + LHLA  +      M++ + +    A ++ Q     TPLH+A   +   +A  LL  
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61

Query: 631 GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFT------PLHLSAQE 684
           G  P      G TPLH+A ++  +     L +    P+  S    T       LHL++  
Sbjct: 62  GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121

Query: 685 GHTDMSSLLIEHGATV-SHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTP 743
           G+  +  LL+  GA V + +  NG T LHL       ++ ++ +  GA+++ VT  G++P
Sbjct: 122 GYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSP 181

Query: 744 LHIASHFGQLNMVRYLVENGAN 765
             +        + + L +    
Sbjct: 182 YQLTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.4 bits (217), Expect = 3e-20
 Identities = 45/203 (22%), Positives = 64/203 (31%), Gaps = 5/203 (2%)

Query: 160 DGLTPLHCAARSGHDN----VIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIY 215
           DG + LH A           VI  +    A L  +      PLH+A   +       L+ 
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60

Query: 216 HGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKS 275
            G   +       T LH+A   G +     L      P+  ++   T  +         S
Sbjct: 61  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHT-CLHLAS 119

Query: 276 SHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGL 335
            H     V   +            NG T LH+A       +V LLLK GA +   T  G 
Sbjct: 120 IHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGY 179

Query: 336 TPLHVASFMGCMNIAIFLLQAGA 358
           +P  +        I   L Q   
Sbjct: 180 SPYQLTWGRPSTRIQQQLGQLTL 202

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.3 bits (214), Expect = 6e-20
 Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 11/204 (5%)

Query: 607 NGVTPLHVASHYDHQNVAL----LLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLE 662
           +G + LH+A  ++ + + +     +    A  +       TPLH+A   NQ +IA  LL 
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60

Query: 663 YNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVS------HQAKNGLTPLHLCAQ 716
               P      G TPLHL+ ++G      +L +   T            NG T LHL + 
Sbjct: 61  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 120

Query: 717 EDKVNVATITMFNGAEIDPVTKA-GFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYT 775
              + +  + +  GA+++      G T LH+A      ++V  L++ GA+VN  T  GY+
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 180

Query: 776 PLHQASQQGRVLIIDLLLGAGAQP 799
           P      +    I   L     + 
Sbjct: 181 PYQLTWGRPSTRIQQQLGQLTLEN 204

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.9 bits (213), Expect = 9e-20
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 16/213 (7%)

Query: 491 DGYTALHISAKEGQDEVA----SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
           DG + LH++    +  +       +    A +        TPLHLA    + +IA+ LL 
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60

Query: 547 KDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGK 606
                + +    +               G         +    +                
Sbjct: 61  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKAT-----------NY 109

Query: 607 NGVTPLHVASHYDHQNVALLLLDRGASP-HAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
           NG T LH+AS + +  +  LL+  GA        NG T LH+A      D+ + LL+  A
Sbjct: 110 NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA 169

Query: 666 KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGA 698
             N  +  G++P  L+     T +   L +   
Sbjct: 170 DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 202

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.2 bits (206), Expect = 7e-19
 Identities = 52/210 (24%), Positives = 78/210 (37%), Gaps = 18/210 (8%)

Query: 300 NGFTPLHIACKKNRYKVVELLLKY----GASIAATTESGLTPLHVASFMGCMNIAIFLLQ 355
           +G + LH+A       +   +++      A +        TPLH+A       IA  LL 
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60

Query: 356 AGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAR------EDQTPLHVASR 409
           AG  P+    RG TPLHLA        V +L ++  +    +          T LH+AS 
Sbjct: 61  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 120

Query: 410 --------LRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQT 461
                   L     A  +A     G T LHLA      D+V +LL+ GA V+    +  +
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 180

Query: 462 PLHVASRLGNGDIASLLLQHGASVDAPTKD 491
           P  +     +  I   L Q          +
Sbjct: 181 PYQLTWGRPSTRIQQQLGQLTLENLQMLPE 210

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.6 bits (202), Expect = 2e-18
 Identities = 54/226 (23%), Positives = 89/226 (39%), Gaps = 21/226 (9%)

Query: 460 QTPLHVASRLGNGDIA----SLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESG 515
            + LH+A       +       +    A ++       T LH++    Q E+A  L  +G
Sbjct: 3   DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG 62

Query: 516 ASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKG 575
                   +G TPLHLA + G +    +L Q                     + AT   G
Sbjct: 63  CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSI-----------LKATNYNG 111

Query: 576 FTPLHLAAKYGRMKIAQMLLQKDAPV-DSQGKNGVTPLHVASHYDHQNVALLLLDRGASP 634
            T LHLA+ +G + I ++L+   A V   +  NG T LH+A    + ++  LLL  GA  
Sbjct: 112 HTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV 171

Query: 635 HAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK-----PNAESKAGF 675
           + V   GY+P  +   +    I   L +   +     P +E +  +
Sbjct: 172 NRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESY 217

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (188), Expect = 1e-16
 Identities = 45/237 (18%), Positives = 69/237 (29%), Gaps = 33/237 (13%)

Query: 229 TALHVASHCGHVRVA----KTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVA 284
           + LH+A       +     + +    A  N +     TPLH+A   N+ + +        
Sbjct: 4   SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 63

Query: 285 KTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFM 344
              L          L        +            L        T  +G T LH+AS  
Sbjct: 64  DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKA--TNYNGHTCLHLASIH 121

Query: 345 GCMNIAIFLLQAGAAP-DTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTP 403
           G + I   L+  GA         G T LHLA      D+V +LL+ GA V+    +  +P
Sbjct: 122 GYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSP 181

Query: 404 LHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQ 460
                                       L      T I + L +          E +
Sbjct: 182 Y--------------------------QLTWGRPSTRIQQQLGQLTLENLQMLPESE 212

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.1 bits (172), Expect = 2e-14
 Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 7/186 (3%)

Query: 75  EEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHV 134
            EV + +  + A +N Q+    TPL++A   N   +   LL  G +  L      TPLH+
Sbjct: 19  MEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHL 78

Query: 135 ACKWGKVAMVELLISKGANIEA------KTRDGLTPLHCAARSGHDNVIDILIEKGAA-L 187
           AC+ G +A V +L                  +G T LH A+  G+  ++++L+  GA   
Sbjct: 79  ACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN 138

Query: 188 YSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLL 247
             +  NG   LH+A    +     +L+  GA V+ +T    +   +       R+ + L 
Sbjct: 139 AQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLG 198

Query: 248 DRKADP 253
               + 
Sbjct: 199 QLTLEN 204

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (153), Expect = 6e-12
 Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 1/101 (0%)

Query: 94  NGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHN-ITPLHVACKWGKVAMVELLISKGA 152
           NG T L++A+   + G+V  L+S G +       N  T LH+A       +V LL+  GA
Sbjct: 110 NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA 169

Query: 153 NIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKN 193
           ++   T  G +P           +   L +           
Sbjct: 170 DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPE 210

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (144), Expect = 9e-11
 Identities = 52/219 (23%), Positives = 83/219 (37%), Gaps = 25/219 (11%)

Query: 640 NGYTPLHIAAKKNQMDIATTLLEY----NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIE 695
           +G + LH+A    +  +   ++       A  N ++    TPLHL+      +++  L+ 
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60

Query: 696 HGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFT------PLHIASH 749
            G     +   G TPLHL  ++  +    +   +       +    T       LH+AS 
Sbjct: 61  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 120

Query: 750 FGQLNMVRYLVENGANVNATTNL-GYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFC- 807
            G L +V  LV  GA+VNA     G T LH A       ++ LLL  GA  N  T     
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 180

Query: 808 ------------CATILVKNGAEIDPVTKLSDEHEKSID 834
                           L +   E   +   S++ E+S D
Sbjct: 181 PYQLTWGRPSTRIQQQLGQLTLENLQMLPESED-EESYD 218

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (97), Expect = 1e-04
 Identities = 7/45 (15%), Positives = 18/45 (40%)

Query: 74  QEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKG 118
             ++  +L+  GA +N  +  G++P  +        + + L    
Sbjct: 157 NPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLT 201

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 77.6 bits (189), Expect = 3e-17
 Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 9/161 (5%)

Query: 160 DGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAG 219
           D    L  AAR+G D+ + IL+  GA   +    G +PLH+A+Q  H + T VL+  G  
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPF-TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

Query: 220 VDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCN 279
            D  T    T LH+A+  GH  + + LL   AD NA+ +   T LH A           N
Sbjct: 60  RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWAT--------EHN 111

Query: 280 HVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELL 320
           H  V + L+   AD + ++    T   I+       + E+L
Sbjct: 112 HQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.3 bits (183), Expect = 2e-16
 Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 1/150 (0%)

Query: 643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSH 702
             L  AA+  Q D    L+   A    +   G +PLHL+AQ GH   + +L+  G +   
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTD-WLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 703 QAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN 762
           + K   TPLH+ A E   N+  + + +GA+++       T LH A+      +V  L++ 
Sbjct: 63  RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122

Query: 763 GANVNATTNLGYTPLHQASQQGRVLIIDLL 792
           GA+V+  +    T    +   G   + ++L
Sbjct: 123 GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.5 bits (168), Expect = 2e-14
 Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 9/161 (5%)

Query: 226 DYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAK 285
           D    L  A+  G     + L+   A        G +PLH+A +   + ++         
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTTDW-LGTSPLHLAAQYGHFSTTEVLLRA--- 56

Query: 286 TLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMG 345
                    +AR     TPLH+A  +    +VE+LLK+GA + A     +T LH A+   
Sbjct: 57  -----GVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHN 111

Query: 346 CMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRIL 386
              +   L++ GA   T +   +T   ++      D+  IL
Sbjct: 112 HQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.3 bits (165), Expect = 4e-14
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 18/167 (10%)

Query: 527 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYG 586
             L  AA+ G+    ++L+   AP                    T   G +PLHLAA+YG
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFT------------------TDWLGTSPLHLAAQYG 45

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLH 646
                ++LL+     D++ K   TPLH+A+   H N+  +LL  GA  +A      T LH
Sbjct: 46  HFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALH 105

Query: 647 IAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLL 693
            A + N  ++   L++Y A  + +SK   T   +S   G+ D++ +L
Sbjct: 106 WATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.6 bits (163), Expect = 7e-14
 Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 1/150 (0%)

Query: 610 TPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNA 669
             L  A+     +   +L+  GA P      G +PLH+AA+         LL      +A
Sbjct: 4   KKLLEAARAGQDDEVRILMANGA-PFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 670 ESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN 729
            +K   TPLH++A EGH ++  +L++HGA V+ +    +T LH   + +   V  + +  
Sbjct: 63  RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122

Query: 730 GAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
           GA++   +K   T   I+   G  ++   L
Sbjct: 123 GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.0 bits (159), Expect = 3e-13
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 6/149 (4%)

Query: 369 TPLHLAARANQTDIVRILLRNGASVDARA------REDQTPLHVASRLRRFSSASQSALT 422
             L  AARA Q D VRIL+ NGA                   H ++      +       
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHG 482
                TPLH+AA     +IV +LL++GA V+A+     T LH A+   + ++  LL+++G
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 483 ASVDAPTKDGYTALHISAKEGQDEVASIL 511
           A V   +K   TA  IS   G +++A IL
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 64.5 bits (155), Expect = 9e-13
 Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 1/150 (0%)

Query: 97  TPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEA 156
             L  AA+   D  VR L++ G   T       +PLH+A ++G  +  E+L+  G + +A
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 157 KTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYH 216
           +T+   TPLH AA  GH N++++L++ GA + +K    +  LH A++ +H+    +LI +
Sbjct: 63  RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122

Query: 217 GAGVDEITVDYLTALHVASHCGHVRVAKTL 246
           GA V   +    TA  ++   G+  +A+ L
Sbjct: 123 GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.3 bits (144), Expect = 3e-11
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 1/149 (0%)

Query: 577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA 636
             L  AA+ G+    ++L+   AP  +    G +PLH+A+ Y H +   +LL  G S  A
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTD-WLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 637 VAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH 696
             K   TPLH+AA +   +I   LL++ A  NA+     T LH + +  H ++  LLI++
Sbjct: 63  RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122

Query: 697 GATVSHQAKNGLTPLHLCAQEDKVNVATI 725
           GA V  Q+K   T   +       ++A I
Sbjct: 123 GADVHTQSKFCKTAFDISIDNGNEDLAEI 151

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.0 bits (133), Expect = 1e-09
 Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           GQ++  +IL+ NGA        G +PL++AAQ  H      LL  G ++   T+ + TPL
Sbjct: 13  GQDDEVRILMANGAPFTTDW-LGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPL 71

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
           H+A   G   +VE+L+  GA++ AK    +T LH A    H  V+++LI+ GA +++++K
Sbjct: 72  HMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK 131

Query: 193 NGLAPLHMASQGDHEAATRVL 213
                  ++    +E    +L
Sbjct: 132 FCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.9 bits (130), Expect = 2e-09
 Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 9/148 (6%)

Query: 262 TPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLL 321
             L  A +               + L+   A        G +PLH+A +   +   E+LL
Sbjct: 4   KKLLEAARAG--------QDDEVRILMANGAPFTTDW-LGTSPLHLAAQYGHFSTTEVLL 54

Query: 322 KYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTD 381
           + G S  A T+   TPLH+A+  G  NI   LL+ GA  +   +   T LH A   N  +
Sbjct: 55  RAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQE 114

Query: 382 IVRILLRNGASVDARAREDQTPLHVASR 409
           +V +L++ GA V  +++  +T   ++  
Sbjct: 115 VVELLIKYGADVHTQSKFCKTAFDISID 142

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.5 bits (166), Expect = 4e-14
 Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 14/142 (9%)

Query: 259 NGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARAL------NGFTPLHIACK-- 310
           +    LH  C+  +        ++          D   +           T LH+A +  
Sbjct: 2   DTAAKLHSLCEAVKT-----RDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSV 56

Query: 311 -KNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGET 369
            +    +V+ L++   ++   T  G T LH             LL+  A+ + A   GET
Sbjct: 57  DRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGET 116

Query: 370 PLHLAARANQTDIVRILLRNGA 391
           PL +A R        +L +  +
Sbjct: 117 PLDIAKRLKHEHCEELLTQALS 138

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.1 bits (165), Expect = 5e-14
 Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 11/152 (7%)

Query: 228 LTALHVASHCGHVRVAKTLLDRKADPNARAL------NGFTPLHIACKKNRYKSSHCNHV 281
           L +L  A     +           D   +           T LH+A +     S     +
Sbjct: 7   LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVR-----SVDRTSL 61

Query: 282 WVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVA 341
            +   L+    + + +   G T LH  C  +  + ++LLL+  ASI    ESG TPL +A
Sbjct: 62  HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 121

Query: 342 SFMGCMNIAIFLLQAGAAPDTATVRGETPLHL 373
             +   +    L QA +    + V  E    L
Sbjct: 122 KRLKHEHCEELLTQALSGRFNSHVHVEYEWRL 153

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.7 bits (164), Expect = 8e-14
 Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 12/138 (8%)

Query: 640 NGYTPLHI---AAKKNQMDIATTLLEYNAKPNAE------SKAGFTPLHLSAQ---EGHT 687
           +    LH    A K   +               +       +   T LHL+ +       
Sbjct: 2   DTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL 61

Query: 688 DMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIA 747
            +   L+++   +  Q   G T LH C   D      + +   A I+   ++G TPL IA
Sbjct: 62  HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 121

Query: 748 SHFGQLNMVRYLVENGAN 765
                 +    L +  + 
Sbjct: 122 KRLKHEHCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.8 bits (159), Expect = 3e-13
 Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 9/134 (6%)

Query: 129 ITPLHVACKWGKVAMVELLISKGANIEAKT------RDGLTPLHCAARSGHDNVIDI--- 179
           +  L  A K   +  +    + G ++  K           T LH A RS     + I   
Sbjct: 7   LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDF 66

Query: 180 LIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGH 239
           L++    L  +T  G   LH     D+    ++L+   A ++       T L +A    H
Sbjct: 67  LVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKH 126

Query: 240 VRVAKTLLDRKADP 253
               + L    +  
Sbjct: 127 EHCEELLTQALSGR 140

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.0 bits (157), Expect = 6e-13
 Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 9/131 (6%)

Query: 428 TPLHLAARANQTDIVRILLRNGASVDARA------REDQTPLHVASRLGNG---DIASLL 478
             L  A +      +     +G  +  +         D+T LH+A R  +     I   L
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67

Query: 479 LQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRM 538
           +Q+  ++D  T  G TALH        E   +L    ASI    + G TPL +A +    
Sbjct: 68  VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 127

Query: 539 KIAQMLLQKDA 549
              ++L Q  +
Sbjct: 128 HCEELLTQALS 138

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.9 bits (149), Expect = 7e-12
 Identities = 32/156 (20%), Positives = 57/156 (36%), Gaps = 23/156 (14%)

Query: 369 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGET 428
             L  A +      +     +G  +  +      PL                      ET
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEK-----IPLANGHE---------------PDET 47

Query: 429 PLHLAARA---NQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
            LHLA R+       IV  L++N  ++D +  +  T LH      N +   LLL+  AS+
Sbjct: 48  ALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASI 107

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITAT 521
           +   + G T L I+ +   +    +LT++ +    +
Sbjct: 108 EIANESGETPLDIAKRLKHEHCEELLTQALSGRFNS 143

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.9 bits (149), Expect = 8e-12
 Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 9/128 (7%)

Query: 72  TGQEEVAKILVDNGATINVQSL------NGFTPLYMAAQENHDG---VVRYLLSKGGNQT 122
           T           +G  +  +           T L++A +        +V +L+   GN  
Sbjct: 16  TRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD 75

Query: 123 LATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIE 182
             T    T LH  C       ++LL+   A+IE     G TPL  A R  H++  ++L +
Sbjct: 76  KQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQ 135

Query: 183 KGAALYSK 190
             +  ++ 
Sbjct: 136 ALSGRFNS 143

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.1 bits (147), Expect = 1e-11
 Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 9/138 (6%)

Query: 570 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDA------PVDSQGKNGVTPLHV---ASHYDH 620
           A T      L  A K   +                 P+ +  +   T LH+   +     
Sbjct: 1   ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTS 60

Query: 621 QNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHL 680
            ++   L+    +       G T LH     +  +    LL   A     +++G TPL +
Sbjct: 61  LHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 120

Query: 681 SAQEGHTDMSSLLIEHGA 698
           + +  H     LL +  +
Sbjct: 121 AKRLKHEHCEELLTQALS 138

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.8 bits (146), Expect = 2e-11
 Identities = 25/138 (18%), Positives = 47/138 (34%), Gaps = 9/138 (6%)

Query: 669 AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA------KNGLTPLHLCAQ---EDK 719
           A++ A    L  + +             G  ++ +       +   T LHL  +      
Sbjct: 1   ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTS 60

Query: 720 VNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQ 779
           +++    + N   +D  T  G T LH          ++ L+   A++      G TPL  
Sbjct: 61  LHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 120

Query: 780 ASQQGRVLIIDLLLGAGA 797
           A +       +LL  A +
Sbjct: 121 AKRLKHEHCEELLTQALS 138

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.1 bits (134), Expect = 7e-10
 Identities = 33/151 (21%), Positives = 49/151 (32%), Gaps = 14/151 (9%)

Query: 520 ATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPL 579
           A T      L  A K   +            +  +  +A+             +   T L
Sbjct: 1   ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLAN-----------GHEPDETAL 49

Query: 580 HLAAK---YGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA 636
           HLA +      + I   L+Q    +D Q   G T LH     D+     LLL   AS   
Sbjct: 50  HLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEI 109

Query: 637 VAKNGYTPLHIAAKKNQMDIATTLLEYNAKP 667
             ++G TPL IA +         L +  +  
Sbjct: 110 ANESGETPLDIAKRLKHEHCEELLTQALSGR 140

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.8 bits (128), Expect = 5e-09
 Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 97  TPLYMAAQENHDGVVRYLLSKGGN------QTLATEHNITPLHVACK---WGKVAMVELL 147
             L  A +      +    + G +           E + T LH+A +      + +V+ L
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67

Query: 148 ISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHE 207
           +    N++ +T  G T LH    + +   + +L+   A++    ++G  PL +A +  HE
Sbjct: 68  VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 127

Query: 208 AATRVLIYHGAG 219
               +L    +G
Sbjct: 128 HCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.7 bits (107), Expect = 3e-06
 Identities = 30/157 (19%), Positives = 49/157 (31%), Gaps = 35/157 (22%)

Query: 303 TPLHIACKKNRYKVVELLLKYGASIAATT------ESGLTPLHVASFM---GCMNIAIFL 353
             L  A K      +      G  +          E   T LH+A        ++I  FL
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67

Query: 354 LQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRF 413
           +Q     D  T +G T LH     +  + +++LLR  AS++      +TPL         
Sbjct: 68  VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPL--------- 118

Query: 414 SSASQSALTRVRGETPLHLAARANQTDIVRILLRNGA 450
                             +A R        +L +  +
Sbjct: 119 -----------------DIAKRLKHEHCEELLTQALS 138

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.7 bits (99), Expect = 3e-05
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 6/56 (10%)

Query: 84  NGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWG 139
             A+I + + +G TPL +A +  H+     L      +        + +HV  +W 
Sbjct: 103 GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF------NSHVHVEYEWR 152

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (165), Expect = 5e-14
 Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 10/165 (6%)

Query: 227 YLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKT 286
           +   L  A+  G +    +LL    + NA+   G T L +    N   +           
Sbjct: 1   WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGA--- 57

Query: 287 LLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGC 346
                 +P+ +   GF  +H A +      ++ LL++ A +      G  PLH+A+  G 
Sbjct: 58  ------NPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGH 111

Query: 347 MNIAIFLLQAGAAPDTAT-VRGETPLHLAARANQTDIVRILLRNG 390
           + +  FL++  A+       +G+T   LA    + ++V ++  NG
Sbjct: 112 LRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.7 bits (145), Expect = 2e-11
 Identities = 22/154 (14%), Positives = 40/154 (25%)

Query: 610 TPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNA 669
             L  A+          LL    + +A    G T L +    N       LL        
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 670 ESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN 729
           +          +       + +LL           +  L       +     V  +    
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 730 GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENG 763
            + +      G T   +A  +G+  +V  +  NG
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.7 bits (145), Expect = 2e-11
 Identities = 22/161 (13%), Positives = 38/161 (23%), Gaps = 8/161 (4%)

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
             L  A   G +  +  L+    N+ A+   G T L        +    +L+        
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR 249
                      A  G  +    +L +      E     L     A       V   +   
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 250 KADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDR 290
            ++   R   G T   +A               V   +   
Sbjct: 123 ASNVGHRNHKGDTACDLARLY--------GRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (144), Expect = 3e-11
 Identities = 26/154 (16%), Positives = 45/154 (29%)

Query: 643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSH 702
             L  AA +  ++  T+LL+ N   NA++  G T L +           LL+        
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 703 QAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN 762
                              + T+  F         +        A       +   +   
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 763 GANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG 796
            +NV    + G T    A   GR  ++ L+   G
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (135), Expect = 4e-10
 Identities = 25/171 (14%), Positives = 47/171 (27%), Gaps = 17/171 (9%)

Query: 527 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYG 586
             L  AA  G ++    LLQ                    ++ A    G T L +     
Sbjct: 3   NELASAAARGDLEQLTSLLQN-----------------NVNVNAQNGFGRTALQVMKLGN 45

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLH 646
                ++LL+   P              A       +  LL  +        +       
Sbjct: 46  PEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHL 105

Query: 647 IAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHG 697
            A + +   +   +    +     +  G T   L+   G  ++ SL+  +G
Sbjct: 106 AAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (129), Expect = 3e-09
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 18/154 (11%)

Query: 461 TPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITA 520
             L  A+  G+ +  + LLQ+  +V+A    G TA     K G  E+A  L   GA+   
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTA-LQVMKLGNPEIARRLLLRGANPDL 61

Query: 521 TTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG-----------------KVASILTE 563
             + GF  +H AA+ G +   Q LL+  A V+ +                   V  ++  
Sbjct: 62  KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH 121

Query: 564 SGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 597
           + +++     KG T   LA  YGR ++  ++   
Sbjct: 122 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (120), Expect = 5e-08
 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 7/154 (4%)

Query: 369 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSA------LT 422
             L  AA     + +  LL+N  +V+A+    +T L V        +           L 
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGN-GDIASLLLQH 481
              G   +H AARA   D ++ LL   A V+    E   PLH+A++ G+   +  L+   
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 482 GASVDAPTKDGYTALHISAKEGQDEVASILTESG 515
            ++V      G TA  ++   G++EV S++  +G
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (115), Expect = 2e-07
 Identities = 23/153 (15%), Positives = 36/153 (23%)

Query: 97  TPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEA 156
             L  AA       +  LL    N         T L V           LL+        
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 157 KTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYH 216
                      A     D +  +L  +        +  L     A +G       ++ + 
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 217 GAGVDEITVDYLTALHVASHCGHVRVAKTLLDR 249
            + V        TA  +A   G   V   +   
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 4e-07
 Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 9/161 (5%)

Query: 25  ALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDN 84
            L  AA + D +    LL+       + V   N +     +  +    G  E+A+ L+  
Sbjct: 4   ELASAAARGDLEQLTSLLQ-----NNVNV---NAQNGFGRTALQVMKLGNPEIARRLLLR 55

Query: 85  GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKV-AM 143
           GA  +++   GF  ++ AA+      ++ LL    +  +       PLH+A K G +  +
Sbjct: 56  GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVV 115

Query: 144 VELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKG 184
             L+    +N+  +   G T    A   G + V+ ++   G
Sbjct: 116 EFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 4e-07
 Identities = 20/154 (12%), Positives = 43/154 (27%), Gaps = 16/154 (10%)

Query: 494 TALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQM---------- 543
             L  +A  G  E  + L ++  ++ A    G T L +          ++          
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 544 ------LLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK 597
                 ++   A       + ++L           +        A +     +  ++   
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 598 DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRG 631
            + V  +   G T   +A  Y    V  L+   G
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (105), Expect = 5e-06
 Identities = 22/145 (15%), Positives = 38/145 (26%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G  E    L+ N   +N Q+  G T L +    N +   R LL                 
Sbjct: 12  GDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDRTGFAVIH 71

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTK 192
             A       +  LL  +           L     A       V  ++    + +  +  
Sbjct: 72  DAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNH 131

Query: 193 NGLAPLHMASQGDHEAATRVLIYHG 217
            G     +A          ++  +G
Sbjct: 132 KGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (102), Expect = 1e-05
 Identities = 24/154 (15%), Positives = 38/154 (24%), Gaps = 7/154 (4%)

Query: 336 TPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDA 395
             L  A+  G +     LLQ     +     G T L +    N     R+LLR       
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 396 RAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGAS---- 451
                      A      +  +                   +       L          
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 452 ---VDARAREDQTPLHVASRLGNGDIASLLLQHG 482
              V  R  +  T   +A   G  ++ SL+  +G
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (97), Expect = 4e-05
 Identities = 24/188 (12%), Positives = 44/188 (23%), Gaps = 34/188 (18%)

Query: 262 TPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLL 321
             L  A  +          +    +LL    + NA+   G T L +    N      LLL
Sbjct: 3   NELASAAARG--------DLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLL 54

Query: 322 KYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTD 381
           +                  A       +   L                    A   +   
Sbjct: 55  RGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRV 114

Query: 382 IVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDI 441
           +  ++    ++V  R  +  T                             LA    + ++
Sbjct: 115 VEFLVKHTASNVGHRNHKGDTAC--------------------------DLARLYGRNEV 148

Query: 442 VRILLRNG 449
           V ++  NG
Sbjct: 149 VSLMQANG 156

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (157), Expect = 3e-13
 Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 3/126 (2%)

Query: 676 TPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDP 735
             L  S+ EG  D+   +I      S     G+T LH         +    +  G  ++ 
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 736 VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGY---TPLHQASQQGRVLIIDLL 792
               G+TPLH A+    + + ++LVE+GA V A T           +  ++G       L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 793 LGAGAQ 798
            G   +
Sbjct: 123 YGVQEK 128

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (139), Expect = 8e-11
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 3/118 (2%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G+ ++ + ++      ++ +  G T L+ A    H  +V++L+  G N   A     TPL
Sbjct: 12  GEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPL 71

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGL---TPLHCAARSGHDNVIDILIEKGAAL 187
           H A     V + + L+  GA + A T   +            G+      L      +
Sbjct: 72  HCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (135), Expect = 3e-10
 Identities = 25/125 (20%), Positives = 54/125 (43%), Gaps = 3/125 (2%)

Query: 130 TPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYS 189
             L  +   G+  +V+ +I +  +      +G+T LH A  +GH  ++  L++ G  + +
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 190 KTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYL---TALHVASHCGHVRVAKTL 246
              +G  PLH A+  ++    + L+  GA V  +T   +            G+ + ++ L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 247 LDRKA 251
              + 
Sbjct: 123 YGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (135), Expect = 3e-10
 Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 3/125 (2%)

Query: 577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA 636
             L  ++  G   + Q ++ +          G+T LH A    H  +   L+  G + +A
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 637 VAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGF---TPLHLSAQEGHTDMSSLL 693
              +G+TPLH AA  N + +   L+E  A   A + +            +EG+T  S  L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 694 IEHGA 698
                
Sbjct: 123 YGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (127), Expect = 3e-09
 Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 11/136 (8%)

Query: 195 LAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPN 254
           LA L  +S        + +IY          + +TALH A   GH  + K L+    + N
Sbjct: 2   LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN 61

Query: 255 ARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGF---TPLHIACKK 311
           A   +G+TPLH A          CN+V V K L++  A   A   +            ++
Sbjct: 62  AADSDGWTPLHCAA--------SCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEE 113

Query: 312 NRYKVVELLLKYGASI 327
              +  + L      +
Sbjct: 114 GYTQCSQFLYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (127), Expect = 3e-09
 Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 7/132 (5%)

Query: 162 LTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVD 221
           L  L  ++  G  +++  +I +          G+  LH A    H    + L+  G  V+
Sbjct: 2   LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN 61

Query: 222 EITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALN-GFTPLHIACKKNRYKSSHCNH 280
               D  T LH A+ C +V+V K L++  A   A   +   T      +          +
Sbjct: 62  AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEE------GY 115

Query: 281 VWVAKTLLDRKA 292
              ++ L   + 
Sbjct: 116 TQCSQFLYGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (127), Expect = 3e-09
 Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 3/127 (2%)

Query: 643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSH 702
             L  ++ + + D+   ++     P+  +  G T LH +   GHT++   L++ G  V+ 
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 703 QAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGF---TPLHIASHFGQLNMVRYL 759
              +G TPLH  A  + V V    + +GA +  +T +              G     ++L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 760 VENGANV 766
                 +
Sbjct: 123 YGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (126), Expect = 5e-09
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 3/125 (2%)

Query: 428 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDA 487
             L  ++   + D+V+ ++           E  T LH A   G+ +I   L+Q G +V+A
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 488 PTKDGYTALHISAKEGQDEVASILTESGASITATTKKGF---TPLHLAAKYGRMKIAQML 544
              DG+T LH +A     +V   L ESGA++ A T              + G  + +Q L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 545 LQKDA 549
                
Sbjct: 123 YGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (123), Expect = 1e-08
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 3/125 (2%)

Query: 97  TPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEA 156
             L  ++ E    +V+ ++ +  + +L  +  IT LH A   G   +V+ L+  G N+ A
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 157 KTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGL---APLHMASQGDHEAATRVL 213
              DG TPLHCAA   +  V   L+E GAA+++ T + +   A      +  +   ++ L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 214 IYHGA 218
                
Sbjct: 123 YGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (117), Expect = 7e-08
 Identities = 32/149 (21%), Positives = 50/149 (33%), Gaps = 25/149 (16%)

Query: 303 TPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDT 362
             L  +  +  + +V+ ++      +   + G+T LH A   G   I  FL+Q G   + 
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 363 ATVRGETPLHLAARANQTDIVRILLRNGASVDARARED-QTPLHVASRLRRFSSASQSAL 421
           A   G TPLH AA  N   + + L+ +GA+V A    D QT                   
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAAD---------------- 106

Query: 422 TRVRGETPLHLAARANQTDIVRILLRNGA 450
                            T   + L     
Sbjct: 107 --------KCEEMEEGYTQCSQFLYGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (115), Expect = 2e-07
 Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 11/133 (8%)

Query: 262 TPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLL 321
             L  +  +            + + ++    DP+     G T LH A      ++V+ L+
Sbjct: 3   ALLLDSSLEG--------EFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLV 54

Query: 322 KYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGE---TPLHLAARAN 378
           ++G ++ A    G TPLH A+    + +  FL+++GAA    T                 
Sbjct: 55  QFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEG 114

Query: 379 QTDIVRILLRNGA 391
            T   + L     
Sbjct: 115 YTQCSQFLYGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 3e-06
 Identities = 26/143 (18%), Positives = 51/143 (35%), Gaps = 20/143 (13%)

Query: 527 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYG 586
             L  ++  G   + Q ++ +                     +    +G T LH A   G
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYE-----------------VDDPSLPNDEGITALHNAVCAG 45

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGY---T 643
             +I + L+Q    V++   +G TPLH A+  ++  V   L++ GA+  A+  +      
Sbjct: 46  HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAA 105

Query: 644 PLHIAAKKNQMDIATTLLEYNAK 666
                 ++     +  L     K
Sbjct: 106 DKCEEMEEGYTQCSQFLYGVQEK 128

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (87), Expect = 7e-04
 Identities = 26/152 (17%), Positives = 37/152 (24%), Gaps = 29/152 (19%)

Query: 335 LTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVD 394
           L  L  +S  G  ++   ++     P      G T LH                      
Sbjct: 2   LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALH---------------------- 39

Query: 395 ARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDA 454
                     H                    G TPLH AA  N   + + L+ +GA+V A
Sbjct: 40  ----NAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA 95

Query: 455 RAREDQ---TPLHVASRLGNGDIASLLLQHGA 483
               D             G    +  L     
Sbjct: 96  MTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 10/135 (7%)

Query: 23  LPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILV 82
           L  L  ++ + +      ++             S    E   +       G  E+ K LV
Sbjct: 2   LALLLDSSLEGEFDLVQRIIY-------EVDDPSLPNDEGITALHNAVCAGHTEIVKFLV 54

Query: 83  DNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGN---QTLATEHNITPLHVACKWG 139
             G  +N    +G+TPL+ AA  N+  V ++L+  G      T +            + G
Sbjct: 55  QFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEG 114

Query: 140 KVAMVELLISKGANI 154
                + L      +
Sbjct: 115 YTQCSQFLYGVQEKM 129

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (153), Expect = 2e-12
 Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 10/163 (6%)

Query: 159 RDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGA 218
           R G   L  AA  G    +  L+ +                        A    L+  GA
Sbjct: 1   RAG-DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGA 59

Query: 219 GVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHC 278
             +       + +H A+  G +   K L++  AD N     G  P+H+A ++        
Sbjct: 60  SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119

Query: 279 NHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLL 321
                        +D + R   G TPL +A ++    +V++L 
Sbjct: 120 LAAE---------SDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (152), Expect = 3e-12
 Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 11/160 (6%)

Query: 229 TALHVASHCGHVRVAKTLLDRK-ADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTL 287
             L  A+  G V+  + LL R+   P+A    G T L +    +   +            
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGA---- 59

Query: 288 LDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCM 347
                 PN +  +G +P+H A +      +++L+++GA +     +G  P+H+A   G  
Sbjct: 60  -----SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHT 114

Query: 348 NIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILL 387
            +  FL  A +       RG TPL LA +    D+V IL 
Sbjct: 115 AVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (144), Expect = 3e-11
 Identities = 39/173 (22%), Positives = 70/173 (40%), Gaps = 18/173 (10%)

Query: 524 KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAA 583
           +    L  AA  G ++  + LL ++                     A  + G T L    
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRE----------------LVHPDALNRFGKTALQ-VM 43

Query: 584 KYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYT 643
            +G   IA  LL++ A  + Q  +G +P+H A+     +   +L++ GA  +     G  
Sbjct: 44  MFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGAL 103

Query: 644 PLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH 696
           P+H+A ++    + + L    +  +     G TPL L+ Q G  D+  +L  H
Sbjct: 104 PIHLAVQEGHTAVVSFL-AAESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (143), Expect = 4e-11
 Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 4/157 (2%)

Query: 639 KNGYTPLHIAAKKNQMDIATTLLEYN-AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHG 697
           + G   L  AA +  +     LL      P+A ++ G T L +           L ++ G
Sbjct: 1   RAG-DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALEL-LKQG 58

Query: 698 ATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVR 757
           A+ + Q  +G +P+H  A+   ++   + + +GA+++     G  P+H+A   G   +V 
Sbjct: 59  ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS 118

Query: 758 YLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG 794
           + +   ++++     G TPL  A Q+G   ++D+L G
Sbjct: 119 F-LAAESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (142), Expect = 5e-11
 Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 2/156 (1%)

Query: 606 KNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNA 665
           + G      A+  D Q V  LL      P A+ + G T            IA  LL+  A
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTA-LQVMMFGSTAIALELLKQGA 59

Query: 666 KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATI 725
            PN +  +G +P+H +A+ G  D   +L+EHGA V+     G  P+H  A ++       
Sbjct: 60  SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIH-LAVQEGHTAVVS 118

Query: 726 TMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE 761
            +   +++      G TPL +A   G  ++V  L  
Sbjct: 119 FLAAESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (132), Expect = 1e-09
 Identities = 37/155 (23%), Positives = 50/155 (32%), Gaps = 34/155 (21%)

Query: 425 RGETPLHLAARANQTDIVRILL-RNGASVDARAREDQTPLHVASRLGNGDIASLLLQ--- 480
           R    L  AA       VR LL R     DA  R  +T L V           LL Q   
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGAS 60

Query: 481 -----------------------------HGASVDAPTKDGYTALHISAKEGQDEVASIL 511
                                        HGA V+ P   G   +H++ +EG   V S  
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSF- 119

Query: 512 TESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ 546
             + + +     +G TPL LA + G   +  +L  
Sbjct: 120 LAAESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (129), Expect = 3e-09
 Identities = 38/154 (24%), Positives = 59/154 (38%), Gaps = 1/154 (0%)

Query: 95  GFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANI 154
               L  AA       VR LL +      A             +G  A+   L+ +GA+ 
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP 61

Query: 155 EAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLI 214
             +   G +P+H AAR+G  + + +L+E GA +      G  P+H+A Q  H A    L 
Sbjct: 62  NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121

Query: 215 YHGAGVDEITVDYLTALHVASHCGHVRVAKTLLD 248
              + +       LT L +A   G   +   L  
Sbjct: 122 AE-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (117), Expect = 1e-07
 Identities = 38/174 (21%), Positives = 62/174 (35%), Gaps = 21/174 (12%)

Query: 490 KDGYTALHISAKEGQ-DEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD 548
           + G   L  +A  G   EV  +L        A  + G T L +          ++L Q  
Sbjct: 1   RAG-DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGA 59

Query: 549 APVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNG 608
           +P                        G +P+H AA+ G +   ++L++  A V+     G
Sbjct: 60  SPNVQD------------------TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTG 101

Query: 609 VTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLE 662
             P+H+A    H  V   L    +  H     G TPL +A ++   D+   L  
Sbjct: 102 ALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (117), Expect = 1e-07
 Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 8/158 (5%)

Query: 25  ALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVDN 84
            L  AA + D +    LL     +        +       +  +    G   +A  L+  
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHP-------DALNRFGKTALQVMMFGSTAIALELLKQ 57

Query: 85  GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMV 144
           GA+ NVQ  +G +P++ AA+      ++ L+  G +  +       P+H+A + G  A+V
Sbjct: 58  GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVV 117

Query: 145 ELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIE 182
             L    +++  +   GLTPL  A + G  +++DIL  
Sbjct: 118 SFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (117), Expect = 1e-07
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 8/153 (5%)

Query: 301 GFTPLHIACKKNRYKVV-ELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA 359
               L  A  +   + V  LL +      A    G T        G   IA+ LL+ GA+
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTA-LQVMMFGSTAIALELLKQGAS 60

Query: 360 PDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQS 419
           P+     G +P+H AAR    D +++L+ +GA V+        P+H+A +    +  S  
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120

Query: 420 A------LTRVRGETPLHLAARANQTDIVRILL 446
           A          RG TPL LA +    D+V IL 
Sbjct: 121 AAESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (116), Expect = 2e-07
 Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 2/142 (1%)

Query: 75  EEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHV 134
           +EV ++L       +  +  G T            +   LL +G +  +      +P+H 
Sbjct: 16  QEVRRLLHRELVHPDALNRFGKTA-LQVMMFGSTAIALELLKQGASPNVQDTSGTSPVHD 74

Query: 135 ACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNG 194
           A + G +  +++L+  GA++      G  P+H A + GH  V+   +   + L+ +   G
Sbjct: 75  AARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSF-LAAESDLHRRDARG 133

Query: 195 LAPLHMASQGDHEAATRVLIYH 216
           L PL +A Q   +    +L  H
Sbjct: 134 LTPLELALQRGAQDLVDILQGH 155

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (129), Expect = 2e-09
 Identities = 28/119 (23%), Positives = 46/119 (38%)

Query: 641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATV 700
               L  AA + +++    LLE  A PNA +  G  P+ +           LL+      
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 701 SHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL 759
                    P+H  A+E  ++   +    GA +D     G  P+ +A   G  ++ RYL
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 121

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (122), Expect = 1e-08
 Identities = 23/120 (19%), Positives = 40/120 (33%)

Query: 676 TPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDP 735
             L  +A  G  +    L+E GA  +     G  P+ +           + +        
Sbjct: 5   DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64

Query: 736 VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGA 795
                  P+H A+  G L+ +  L   GA ++     G  P+  A + G   +   L  A
Sbjct: 65  DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA 124

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (122), Expect = 1e-08
 Identities = 30/121 (24%), Positives = 47/121 (38%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
               L  AA   + + VR LL  GA+ +A     + P+ V           LLL      
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
            A        +H +A+EG  +   +L  +GA +      G  P+ LA + G   +A+ L 
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

Query: 546 Q 546
            
Sbjct: 123 A 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (121), Expect = 2e-08
 Identities = 30/119 (25%), Positives = 49/119 (41%)

Query: 577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA 636
             L  AA  GR++  + LL+  A  ++    G  P+ V      +   LLLL       A
Sbjct: 5   DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64

Query: 637 VAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIE 695
                  P+H AA++  +D    L    A+ +     G  P+ L+ + GH D++  L  
Sbjct: 65  DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (119), Expect = 3e-08
 Identities = 28/123 (22%), Positives = 42/123 (34%)

Query: 126 EHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGA 185
           E +   L  A   G+V  V  L+  GAN  A    G  P+             +L+    
Sbjct: 1   EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60

Query: 186 ALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKT 245
              +       P+H A++        VL   GA +D         + +A   GH  VA+ 
Sbjct: 61  PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 120

Query: 246 LLD 248
           L  
Sbjct: 121 LRA 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (115), Expect = 9e-08
 Identities = 18/118 (15%), Positives = 31/118 (26%), Gaps = 25/118 (21%)

Query: 229 TALHVASHCGHVRVAKTLLDRKADPNARAL-------------------------NGFTP 263
             L  A+  G V   + LL+  A+PNA                                 
Sbjct: 5   DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64

Query: 264 LHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLL 321
                 +  + ++    +     L    A  + R   G  P+ +A +     V   L 
Sbjct: 65  DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (113), Expect = 2e-07
 Identities = 33/136 (24%), Positives = 51/136 (37%), Gaps = 14/136 (10%)

Query: 252 DPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKK 311
           +P+A        L  A  +          V   + LL+  A+PNA    G  P+ +    
Sbjct: 1   EPSA------DWLATAAARG--------RVEEVRALLEAGANPNAPNSYGRRPIQVMMMG 46

Query: 312 NRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPL 371
           +      LLL       A   +   P+H A+  G ++  + L +AGA  D     G  P+
Sbjct: 47  SARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPV 106

Query: 372 HLAARANQTDIVRILL 387
            LA      D+ R L 
Sbjct: 107 DLAEELGHRDVARYLR 122

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (104), Expect = 3e-06
 Identities = 24/110 (21%), Positives = 42/110 (38%)

Query: 73  GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPL 132
           G+ E  + L++ GA  N  +  G  P+ +    +       LL               P+
Sbjct: 14  GRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCADPATLTRPV 73

Query: 133 HVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIE 182
           H A + G +  + +L   GA ++ +   G  P+  A   GH +V   L  
Sbjct: 74  HDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (101), Expect = 9e-06
 Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 7/121 (5%)

Query: 367 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVA-------SRLRRFSSASQS 419
               L  AA   + + VR LL  GA+ +A     + P+ V        + L     A  +
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 420 ALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLL 479
                    P+H AAR    D + +L R GA +D R    + P+ +A  LG+ D+A  L 
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

Query: 480 Q 480
            
Sbjct: 123 A 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (97), Expect = 3e-05
 Identities = 30/118 (25%), Positives = 41/118 (34%)

Query: 97  TPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEA 156
             L  AA       VR LL  G N      +   P+ V           LL+       A
Sbjct: 5   DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64

Query: 157 KTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLI 214
                  P+H AAR G  + + +L   GA L  +   G  P+ +A +  H    R L 
Sbjct: 65  DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (96), Expect = 4e-05
 Identities = 27/136 (19%), Positives = 46/136 (33%), Gaps = 17/136 (12%)

Query: 461 TPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITA 520
             L  A+  G  +    LL+ GA+ +AP   G   + +           +L        A
Sbjct: 5   DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64

Query: 521 TTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLH 580
                  P+H AA+ G +    +L +  A +D +                    G  P+ 
Sbjct: 65  DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVR-----------------DAWGRLPVD 107

Query: 581 LAAKYGRMKIAQMLLQ 596
           LA + G   +A+ L  
Sbjct: 108 LAEELGHRDVARYLRA 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (95), Expect = 5e-05
 Identities = 28/136 (20%), Positives = 46/136 (33%), Gaps = 17/136 (12%)

Query: 527 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYG 586
             L  AA  GR++  + LL                 E+GA+  A    G  P+ +     
Sbjct: 5   DWLATAAARGRVEEVRALL-----------------EAGANPNAPNSYGRRPIQVMMMGS 47

Query: 587 RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLH 646
                 +LL    P  +       P+H A+     +  ++L   GA        G  P+ 
Sbjct: 48  ARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVD 107

Query: 647 IAAKKNQMDIATTLLE 662
           +A +    D+A  L  
Sbjct: 108 LAEELGHRDVARYLRA 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (92), Expect = 2e-04
 Identities = 27/122 (22%), Positives = 40/122 (32%), Gaps = 7/122 (5%)

Query: 332 ESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGA 391
           E     L  A+  G +     LL+AGA P+     G  P+ +    +      +LL    
Sbjct: 1   EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60

Query: 392 SVDARAREDQTPLHVASRLRRFSSASQSALTRVR-------GETPLHLAARANQTDIVRI 444
              A       P+H A+R     +         R       G  P+ LA      D+ R 
Sbjct: 61  PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 120

Query: 445 LL 446
           L 
Sbjct: 121 LR 122

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (89), Expect = 4e-04
 Identities = 27/116 (23%), Positives = 44/116 (37%)

Query: 608 GVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKP 667
               L  A+          LL+ GA+P+A    G  P+ +    +       LL      
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVA 723
            A+      P+H +A+EG  D   +L   GA +  +   G  P+ L  +    +VA
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVA 118

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.0 bits (112), Expect = 3e-07
 Identities = 26/114 (22%), Positives = 45/114 (39%)

Query: 676 TPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDP 735
                + + G  D     +  G  V+   + G  PLH  A   ++ +    +  GA+I+ 
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 736 VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLII 789
             K   TPL  A + G ++ V+ L+  GA+       G T L     Q    ++
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKALL 117

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.6 bits (111), Expect = 4e-07
 Identities = 26/109 (23%), Positives = 44/109 (40%)

Query: 163 TPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDE 222
                A ++G  + +   + KG  +    + G  PLH A+          L+  GA ++ 
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 223 ITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKN 271
               ++T L  A + GHV   K LL + AD   +  +G T L     + 
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQA 112

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.8 bits (109), Expect = 7e-07
 Identities = 32/112 (28%), Positives = 51/112 (45%)

Query: 97  TPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEA 156
                A +      V+  ++KG +     E    PLH A   G++ ++E L+ KGA+I A
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 157 KTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEA 208
             +  +TPL  A   GH + + +L+ KGA    K  +GL  L        +A
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKA 115

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.0 bits (107), Expect = 1e-06
 Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 4/121 (3%)

Query: 426 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASV 485
            +     A +    D V+  +  G  V+      + PLH A+  G  +I   LL  GA +
Sbjct: 2   CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI 61

Query: 486 DAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLL 545
           +AP K   T L  +  EG      +L   GA  T     G T L         +  + LL
Sbjct: 62  NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDN----QAIKALL 117

Query: 546 Q 546
           Q
Sbjct: 118 Q 118

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.3 bits (105), Expect = 2e-06
 Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 4/119 (3%)

Query: 643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSH 702
                A K   +D     +      N   + G  PLH +A  G  ++   L+  GA ++ 
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 703 QAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE 761
             K+ +TPL     E  V+   + +  GA+       G T L    +      ++ L++
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDN----QAIKALLQ 118

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.1 bits (102), Expect = 6e-06
 Identities = 26/113 (23%), Positives = 42/113 (37%)

Query: 577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA 636
                A K G +   +  + K   V+   + G  PLH A+      +   LL +GA  +A
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 637 VAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDM 689
             K+  TPL  A  +  +     LL   A    +   G T L  +  +    +
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKAL 116

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.5 bits (90), Expect = 2e-04
 Identities = 30/109 (27%), Positives = 43/109 (39%)

Query: 610 TPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNA 669
                A      +     + +G   +   + G  PLH AA   Q++I   LL   A  NA
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 670 ESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQED 718
             K   TPL  +  EGH     LL+  GA  + +  +GLT L     + 
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQA 112

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.7 bits (88), Expect = 4e-04
 Identities = 29/107 (27%), Positives = 39/107 (36%)

Query: 303 TPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDT 362
                A K      V+  +  G  +  T E G  PLH A+  G + I  FLL  GA  + 
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 363 ATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASR 409
                 TPL  A        V++LL  GA    +  +  T L     
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDN 110

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.0 bits (86), Expect = 7e-04
 Identities = 26/117 (22%), Positives = 39/117 (33%), Gaps = 19/117 (16%)

Query: 527 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTES----------------GASITA 570
                A K G +   +  + K   V+   +                        GA I A
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 571 TTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLL 627
             K   TPL  A   G +   ++LL K A    +G +G+T L       +Q +  LL
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATD---NQAIKALL 117

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.2 bits (84), Expect = 0.001
 Identities = 28/114 (24%), Positives = 37/114 (32%), Gaps = 8/114 (7%)

Query: 229 TALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLL 288
                A   G +   K  + +  D N     G  PLH A    + +      +       
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLK------ 57

Query: 289 DRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVAS 342
              AD NA   +  TPL  A  +     V+LLL  GA        GLT L    
Sbjct: 58  --GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATD 109

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.0 bits (81), Expect = 0.004
 Identities = 24/119 (20%), Positives = 37/119 (31%), Gaps = 10/119 (8%)

Query: 367 GETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSA------ 420
            +     A +    D V+  +  G  V+      + PLH A+   +              
Sbjct: 2   CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI 61

Query: 421 -LTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLL 478
                   TPL  A        V++LL  GA    +  +  T L       N  I +LL
Sbjct: 62  NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATD---NQAIKALL 117

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	838
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.98
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.98
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.97
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.97
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.97
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.96
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.96
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.95
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.95
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.94
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.94
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.94
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.94
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.93
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.93
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.93
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.91
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.91
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.9
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.9
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.89
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.89
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.87
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.87
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.86
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.83

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-50  Score=426.06  Aligned_cols=394  Identities=40%  Similarity=0.630  Sum_probs=364.8

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHCCCCccccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHH
Q psy3308         368 ETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLR  447 (838)
Q Consensus       368 ~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~  447 (838)
                      .||||.|+..|+.++|++|+++|++++..+..                          |.|||+.|+..|+.+++++|++
T Consensus         1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~--------------------------g~TpL~~A~~~g~~~iv~~Ll~   54 (408)
T d1n11a_           1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVK--------------------------VETPLHMAARAGHTEVAKYLLQ   54 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSC--------------------------CCCHHHHHHHHTCHHHHHHHHH
T ss_pred             CChHHHHHHCcCHHHHHHHHHCCCCCCCCCCC--------------------------CCCHHHHHHHcCCHHHHHHHHH
Confidence            38999999999999999999999999887765                          5677888999999999999999


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCc
Q psy3308         448 NGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFT  527 (838)
Q Consensus       448 ~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~  527 (838)
                      +|++++.++..|.+||++|+..|+.+++++|+..+.+..........++..+...+...........+......+..+.+
T Consensus        55 ~gadi~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (408)
T d1n11a_          55 NKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFT  134 (408)
T ss_dssp             HTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred             CcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccch
Confidence            99999999999999999999999999999999998888888888889999999999999999999999888888999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCC
Q psy3308         528 PLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKN  607 (838)
Q Consensus       528 ~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~  607 (838)
                      ++..|+..++.+++++|++.+..                 ++..+..+.+||+.|+..++.+++++|+++|++++..+..
T Consensus       135 ~l~~a~~~~~~~~v~~ll~~~~~-----------------~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~  197 (408)
T d1n11a_         135 PLHVAAKYGKVRVAELLLERDAH-----------------PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWN  197 (408)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTT
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC-----------------CCcCCCcCchHHHHHHHcCCHHHHHHHHhcCCcccccCCC
Confidence            99999999999999999987654                 3456678899999999999999999999999999999999


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcH
Q psy3308         608 GVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHT  687 (838)
Q Consensus       608 ~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~  687 (838)
                      |.+|++.+......++..+|+..+......+..+.|||+.|+..++.++++++.+.+...+..+..|.||++.|+..++.
T Consensus       198 ~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~  277 (408)
T d1n11a_         198 GYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHV  277 (408)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred             CCCcchhhhccchhhhhhhhhhccccccccCCCCCCHHHHHHHhCcHhHhhhhhccccccccccCCCCChhhhhhhcCcH
Confidence            99999999999999999999999988888888999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCc
Q psy3308         688 DMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN  767 (838)
Q Consensus       688 ~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~  767 (838)
                      +++++|+++|++++..+..+.|||+.|+..++.++++++++.|++++.+|..|+||||+|++.|+.++|++|+++|+++|
T Consensus       278 ~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n  357 (408)
T d1n11a_         278 PVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPN  357 (408)
T ss_dssp             HHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred             HHHHHHHHCCCccccccccccccchhhcccCcceeeeeeccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCcHHHHHHHhCcHHHHHHHH---hCCCCCCCCCC
Q psy3308         768 ATTNLGYTPLHQASQQGRVLIIDLLL---GAGAQPNATTN  804 (838)
Q Consensus       768 ~~~~~g~t~l~~A~~~~~~~~v~~Ll---~~ga~~~~~~~  804 (838)
                      .+|++|+||||+|+++|+.++|++|.   +++.+....+.
T Consensus       358 ~~d~~G~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~~~  397 (408)
T d1n11a_         358 EVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDK  397 (408)
T ss_dssp             CCCSSSCCHHHHHHHTTCHHHHHHHHHHCCCCSSCC----
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHHHHhcccccccccc
Confidence            99999999999999999999998664   46777666654

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-49  Score=422.05  Aligned_cols=380  Identities=48%  Similarity=0.746  Sum_probs=359.3

Q ss_pred             CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHH
Q psy3308         428 TPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEV  507 (838)
Q Consensus       428 ~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~  507 (838)
                      ||||.|+..|+.++|++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++..+..|.|||++|+..|+.++
T Consensus         2 TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~~   81 (408)
T d1n11a_           2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNM   81 (408)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHH
T ss_pred             ChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCc
Q psy3308         508 ASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGR  587 (838)
Q Consensus       508 v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~  587 (838)
                      +++|+..+.+..........++..+...+...........+.                 .....+..+.++++.|+..++
T Consensus        82 ~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~l~~a~~~~~  144 (408)
T d1n11a_          82 VKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEA-----------------SQACMTKKGFTPLHVAAKYGK  144 (408)
T ss_dssp             HHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-----------------CSCCCCTTSCCHHHHHHHTTC
T ss_pred             HHHHHHhhhccccccccccchhhhhhhhcccccccccccccc-----------------cccccccccchHHHHHHHcCC
Confidence            999999988887777788889999988888887777765543                 334556788899999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCC
Q psy3308         588 MKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKP  667 (838)
Q Consensus       588 ~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~  667 (838)
                      .+++++|+++|++++..+..+.+||+.|+..++.+++++|+.+|++++..+..|.||++.+....+.++...|+..+...
T Consensus       145 ~~~v~~ll~~~~~~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~  224 (408)
T d1n11a_         145 VRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA  224 (408)
T ss_dssp             HHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred             HHHHHHHHHcCCCCCcCCCcCchHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcchhhhccchhhhhhhhhhccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998888


Q ss_pred             CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q psy3308         668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIA  747 (838)
Q Consensus       668 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A  747 (838)
                      ...+..+.|||++|+..++.++++++.+.+...+..+..|.||++.|++.++.+++++|+++|++++..+..+.|||+.|
T Consensus       225 ~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~  304 (408)
T d1n11a_         225 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVA  304 (408)
T ss_dssp             TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHH
T ss_pred             cccCCCCCCHHHHHHHhCcHhHhhhhhccccccccccCCCCChhhhhhhcCcHHHHHHHHHCCCccccccccccccchhh
Confidence            88888999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHHcCCccCccccc
Q psy3308         748 SHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVKNGAEIDPVTKL  825 (838)
Q Consensus       748 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  825 (838)
                      +..++.+++++++++|+++|.+|.+|+||||+|+++|+.++|++|+++|||++.+|++|.| +++|+++|+ .++|+.|
T Consensus       305 ~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~-~~iv~~L  382 (408)
T d1n11a_         305 SHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGY-ISVTDVL  382 (408)
T ss_dssp             HHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTC-HHHHHHH
T ss_pred             cccCcceeeeeeccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999 999999999 4777533

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-35  Score=283.37  Aligned_cols=218  Identities=25%  Similarity=0.374  Sum_probs=204.7

Q ss_pred             CcHHHHHHHcCcHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcH
Q psy3308         576 FTPLHLAAKYGRMKIAQMLL-QKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQM  654 (838)
Q Consensus       576 ~~~l~~a~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~  654 (838)
                      .+.++.++..|+.+.|+.++ +.+..++.+|..|+||||+|+..|+.+++++|+..+.........+.++++.++..++.
T Consensus         4 ~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (223)
T d1uoha_           4 NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRD   83 (223)
T ss_dssp             SSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTCH
T ss_pred             HHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhccccccccccccccccccccccccccccccccc
Confidence            47888999999998886665 55778889999999999999999999999999999999888888899999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCC
Q psy3308         655 DIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID  734 (838)
Q Consensus       655 ~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~  734 (838)
                      +++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|.+.+.+++
T Consensus        84 ~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~  163 (223)
T d1uoha_          84 EIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTN  163 (223)
T ss_dssp             HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred             chhHHHhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhccccceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHh
Q psy3308         735 PVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG  794 (838)
Q Consensus       735 ~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~  794 (838)
                      .+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+| ++|+.+++++|++
T Consensus       164 ~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         164 IQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred             eccCCCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH-HCCCHHHHhcccC
Confidence            9999999999999999999999999999999999999999999998 5799999999986

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-33  Score=283.75  Aligned_cols=263  Identities=27%  Similarity=0.331  Sum_probs=234.2

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC
Q psy3308         526 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG  605 (838)
Q Consensus       526 ~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~  605 (838)
                      .|+|+.|++.|+.+++++|+++|++++.                ..+..|.||||+|+..|+.+++++|++.+...+..+
T Consensus         6 ~~~L~~Ai~~~~~e~vk~Ll~~G~din~----------------~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~   69 (285)
T d1wdya_           6 NHLLIKAVQNEDVDLVQQLLEGGANVNF----------------QEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRK   69 (285)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHTTCCTTC----------------CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred             cHHHHHHHHcCCHHHHHHHHHCCCCcCc----------------cCCCCCCCHHHHHHHcCCHHHhhhhccccccccccc
Confidence            4677788888888888888777654321                123468999999999999999999999999999888


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCC----------CCCC
Q psy3308         606 KNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAES----------KAGF  675 (838)
Q Consensus       606 ~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~----------~~g~  675 (838)
                      ..+.+|.+.+...+..+...++++...+....+..+.++++.|+..++...++.+++...+++...          ..|.
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  149 (285)
T d1wdya_          70 KNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGA  149 (285)
T ss_dssp             TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCC
T ss_pred             cccchhhHHHhhcCCccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCc
Confidence            899999999999999999999999988888888899999999999999999999999877665543          3589


Q ss_pred             cHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHhHHHHhc----CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy3308         676 TPLHLSAQEGHTDMSSLLIEH-GATVSHQAKNGLTPLHLCAQE----DKVNVATITMFNGAEIDPVTKAGFTPLHIASHF  750 (838)
Q Consensus       676 t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~A~~~----g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~  750 (838)
                      |||++|+++|+.+++++|+++ |++++..+..|.+++..+...    +..+++++|+++|++++.++..|.||||+|+..
T Consensus       150 t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~  229 (285)
T d1wdya_         150 TALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEK  229 (285)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHT
T ss_pred             hHHHHHHHcCCHHHHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCccchhhhc
Confidence            999999999999999999975 899999999999888876654    345799999999999999999999999999999


Q ss_pred             CCHHHHHHHHHC-CCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCC
Q psy3308         751 GQLNMVRYLVEN-GANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN  804 (838)
Q Consensus       751 g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~  804 (838)
                      |+.++|++|+++ |+++|.+|.+|+||||+|+++|+.++|++|+++|||+|+.|.
T Consensus       230 ~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d~  284 (285)
T d1wdya_         230 KHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             TCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             CcHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence            999999999985 999999999999999999999999999999999999999874

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.6e-35  Score=287.10  Aligned_cols=228  Identities=25%  Similarity=0.289  Sum_probs=189.2

Q ss_pred             cCCCCCcHHHHHHHcCcHHHHHHHHhCCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHH
Q psy3308         571 TTKKGFTPLHLAAKYGRMKIAQMLLQKDAP---VDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHI  647 (838)
Q Consensus       571 ~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~---~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~  647 (838)
                      .+.+|.||||.|+..|+.+++++|+++|++   ++.++..|.||||+|+..|+.+++++|+++|++++..+..|.|||+.
T Consensus         5 i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL~~   84 (255)
T d1oy3d_           5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHL   84 (255)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHH
T ss_pred             CCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccccccchhhhh
Confidence            467899999999999999999999999877   66788899999999999999999999999999999999999999999


Q ss_pred             HHHcCcHHHHHHHHhCCCCCCCCCC----------CCCcHHHHHHHc----CcHHHHHHHHhCCCCCCCCCCCCCcHhHH
Q psy3308         648 AAKKNQMDIATTLLEYNAKPNAESK----------AGFTPLHLSAQE----GHTDMSSLLIEHGATVSHQAKNGLTPLHL  713 (838)
Q Consensus       648 A~~~~~~~iv~~Ll~~~~~~~~~~~----------~g~t~L~~A~~~----g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~  713 (838)
                      |+..++.+++++|++.+........          .+.+....+...    ........+...+.+++.++..|.||||+
T Consensus        85 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~  164 (255)
T d1oy3d_          85 ACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHV  164 (255)
T ss_dssp             HTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHH
T ss_pred             hhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccc
Confidence            9999999999999987543222110          000111111111    11112222333466778889999999999


Q ss_pred             HHhcCCHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHH
Q psy3308         714 CAQEDKVNVATITMFNGAEIDP-VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLL  792 (838)
Q Consensus       714 A~~~g~~~i~~~L~~~~~~~~~-~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L  792 (838)
                      |++.|+.+++++|++++++.+. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+++++.+++++|
T Consensus       165 A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~~~~i~~~L  244 (255)
T d1oy3d_         165 AVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLL  244 (255)
T ss_dssp             HHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHH
T ss_pred             cccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Confidence            9999999999999999998875 467899999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCCC
Q psy3308         793 LGAGAQ  798 (838)
Q Consensus       793 l~~ga~  798 (838)
                      +++||+
T Consensus       245 l~~Ga~  250 (255)
T d1oy3d_         245 RAHGAP  250 (255)
T ss_dssp             HHTTCC
T ss_pred             HHcCCC
Confidence            999996

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-34  Score=275.16  Aligned_cols=218  Identities=24%  Similarity=0.315  Sum_probs=204.9

Q ss_pred             CCcHHHHHHHcCCHHHHHHHH-hCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCc
Q psy3308         608 GVTPLHVASHYDHQNVALLLL-DRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGH  686 (838)
Q Consensus       608 ~~~~l~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~  686 (838)
                      +.+.++.++..|+.+.++.++ +.+..++..|..|+||||+|+..|+.+++++|++.+.+....+..+.++++.++..++
T Consensus         3 ~~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (223)
T d1uoha_           3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGR   82 (223)
T ss_dssp             SSSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTC
T ss_pred             CHHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhcccccccccccccccccccccccccccccccc
Confidence            356889999999988886655 5678899999999999999999999999999999999988888899999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy3308         687 TDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV  766 (838)
Q Consensus       687 ~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~  766 (838)
                      .+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..++.+++++|+++|+++
T Consensus        83 ~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i  162 (223)
T d1uoha_          83 DEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAST  162 (223)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred             cchhHHHhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhcccccee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHHcCCccCccccccc
Q psy3308         767 NATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVKNGAEIDPVTKLSD  827 (838)
Q Consensus       767 ~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  827 (838)
                      +..|..|+||||.|++.|+.++|++|+++|+|++.+|.+|+| +++| ..|+ .++++.|+|
T Consensus       163 ~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A-~~~~-~~i~~~Ll~  222 (223)
T d1uoha_         163 NIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA-KGGL-GLILKRMVE  222 (223)
T ss_dssp             CCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHC-CTTH-HHHHHHHHC
T ss_pred             eeccCCCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH-HCCC-HHHHhcccC
Confidence            999999999999999999999999999999999999999999 9987 4555 478888776

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-33  Score=278.68  Aligned_cols=266  Identities=31%  Similarity=0.350  Sum_probs=211.3

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHCCCCCCccc-cCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCC
Q psy3308          95 GFTPLYMAAQENHDGVVRYLLSKGGNQTLAT-EHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGH  173 (838)
Q Consensus        95 ~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~-~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~  173 (838)
                      +.|+|+.|+++|++++|++|+++|++++.++ ..|.||||+|+..|+.++|++|++.+......+..+.++.+.|+..+.
T Consensus         5 ~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (285)
T d1wdya_           5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGS   84 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred             CcHHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhcCC
Confidence            3577888888888888888888888776554 357788888888888888888888877777777777788888888888


Q ss_pred             HHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCc----------ccCCCccHHHHHHhcCCHHHH
Q psy3308         174 DNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDE----------ITVDYLTALHVASHCGHVRVA  243 (838)
Q Consensus       174 ~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~----------~~~~~~~~l~~A~~~g~~~iv  243 (838)
                      .+...++++...+....+..+.++++.|+..|+..++..++....+++.          ....+.|||++|+..|+.+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~  164 (285)
T d1wdya_          85 VKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVL  164 (285)
T ss_dssp             HHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHH
T ss_pred             ccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCHHHH
Confidence            8888888877666666667777888888888888888777776554432          223467899999999999999


Q ss_pred             HHHHHC-CCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy3308         244 KTLLDR-KADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLK  322 (838)
Q Consensus       244 ~~L~~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~  322 (838)
                      ++|++. |++++..+..+.++...+...+...    ...+++++|+++|++++.++..|.||||.|+..|+.++|++|++
T Consensus       165 ~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~  240 (285)
T d1wdya_         165 KILLDEMGADVNACDNMGRNALIHALLSSDDS----DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE  240 (285)
T ss_dssp             HHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTT----THHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHhccCCCcccccCCCCcccccccccccch----HHHHHHHHHHHCCCCCCccCCCCCCccchhhhcCcHHHHHHHHH
Confidence            999975 7889988888888887776655332    35678888888888888888888888888888888888888887


Q ss_pred             C-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy3308         323 Y-GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTAT  364 (838)
Q Consensus       323 ~-~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~  364 (838)
                      + |++++.++.+|.|||++|+++|+.++|++|+++|++++..|
T Consensus       241 ~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d  283 (285)
T d1wdya_         241 QEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             SSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             cCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccc
Confidence            4 78888888888888888888888888888888888888765

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.5e-33  Score=266.54  Aligned_cols=220  Identities=26%  Similarity=0.367  Sum_probs=203.5

Q ss_pred             cHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCc---cCCCCChHHHHHHHcC
Q psy3308         577 TPLHLAAKYGRMKIAQMLLQK-DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHA---VAKNGYTPLHIAAKKN  652 (838)
Q Consensus       577 ~~l~~a~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~---~~~~~~t~L~~A~~~~  652 (838)
                      +|||.|+..|+.++|+.|++. +.+++.++.+|.||||+|+..|+.+++++|+++|++++.   .+..|.+|++.++..+
T Consensus         2 ~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~   81 (229)
T d1ixva_           2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVG   81 (229)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHHT
T ss_pred             HhHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhcccccccccccccccccccccccc
Confidence            799999999999999998874 678999999999999999999999999999999999875   4557889999999999


Q ss_pred             cHHHHHHHHhCCCCC--CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCC
Q psy3308         653 QMDIATTLLEYNAKP--NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNG  730 (838)
Q Consensus       653 ~~~iv~~Ll~~~~~~--~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~  730 (838)
                      ..++++.++..+...  ...+..+.|+++.++..++.+++++|++.|...+..+..|.||||+|+..|+.+++++|+..+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~  161 (229)
T d1ixva_          82 NLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG  161 (229)
T ss_dssp             CHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred             ccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhcccccccccccccc
Confidence            999999999987654  445667889999999999999999999999999999999999999999999999999999987


Q ss_pred             -CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCC
Q psy3308         731 -AEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN-GANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP  799 (838)
Q Consensus       731 -~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~  799 (838)
                       .+++.+|..|+||||+|+..|+.++|++|+++ |++++.+|..|+|||++|+.   .+++++|+++|+|.
T Consensus       162 ~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~d~  229 (229)
T d1ixva_         162 KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVVDA  229 (229)
T ss_dssp             CCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSC---HHHHHHHHHHCCCC
T ss_pred             cccccccccccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHhh---HHHHHHHHHcCCCC
Confidence             67899999999999999999999999999975 99999999999999999984   58999999999973

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-32  Score=269.22  Aligned_cols=242  Identities=27%  Similarity=0.331  Sum_probs=151.7

Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHHCCCC---CCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHH
Q psy3308          91 QSLNGFTPLYMAAQENHDGVVRYLLSKGGN---QTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHC  167 (838)
Q Consensus        91 ~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~---~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~  167 (838)
                      .+.+|+||||+||.+|+.++|++|+++|++   ++..+..|.||||+||..|+.++|++|+++|++++..+..|.|||++
T Consensus         5 i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL~~   84 (255)
T d1oy3d_           5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHL   84 (255)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHH
T ss_pred             CCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccccccchhhhh
Confidence            345667777777777777777777776655   33455666677777777777777777777777777777777777777


Q ss_pred             HHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHH
Q psy3308         168 AARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLL  247 (838)
Q Consensus       168 A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~  247 (838)
                      |+..|+.+++++|++.+.......   ...+.....                              .+ .........++
T Consensus        85 A~~~~~~~~~~~Ll~~~~~~~~~~---~~~~~~~~~------------------------------~~-~~~~~~~~~~~  130 (255)
T d1oy3d_          85 ACRVRAHTCACVLLQPRPSHPRDA---SDTYLTQSQ------------------------------DC-TPDTSHAPAAV  130 (255)
T ss_dssp             HTTTTCHHHHHHHSSSCCSSCCCC--------------------------------------------------------
T ss_pred             hhccCchHHHHHHHhhccchhccc---chhhhhHHh------------------------------hh-cccchHHHHHH
Confidence            777777777777766543321100   000000000                              00 00000000000


Q ss_pred             HCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCc
Q psy3308         248 DRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASI  327 (838)
Q Consensus       248 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~  327 (838)
                      ..                   ...       ............+..++.++..|.||||.|+..|+.+++++|++.+++.
T Consensus       131 ~~-------------------~~~-------~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~  184 (255)
T d1oy3d_         131 DS-------------------QPN-------PENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL  184 (255)
T ss_dssp             ---------------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred             Hh-------------------hcc-------hhHHHHHHhhhcCcccccccccCcccccccccccccccccchhcccccc
Confidence            00                   000       0011122222334555667778888888888888888888888888776


Q ss_pred             ccc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy3308         328 AAT-TESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGAS  392 (838)
Q Consensus       328 ~~~-~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~  392 (838)
                      +.. +..|.||||+|++.|+.+++++|+++|++++.++..|.|||++|+..++.+++++|+++|++
T Consensus       185 ~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         185 NKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             cccccccccccccccccccHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence            643 45688888888888888888888888888888888888888888888888888888888885

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.98  E-value=2e-32  Score=273.24  Aligned_cols=259  Identities=22%  Similarity=0.323  Sum_probs=202.0

Q ss_pred             hHHHHHHH-hCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccC
Q psy3308         494 TALHISAK-EGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATT  572 (838)
Q Consensus       494 ~~l~~A~~-~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~  572 (838)
                      |||+.++. .|..++++.|.+.+++... +..|+||||+|+..|+.+++++|+.+                         
T Consensus         2 ~p~~~~~~~~~~~~~~~~l~~~~~n~~~-~~~g~T~Lh~A~~~g~~~~v~~Ll~~-------------------------   55 (277)
T d2fo1e1           2 SPIKLHTEAAGSYAITEPITRESVNIID-PRHNRTVLHWIASNSSAEKSEDLIVH-------------------------   55 (277)
T ss_dssp             CCCHHHHHHHSSSCCCSCCSTTTTTTCC-CSSCCCHHHHHHCTTCCSCCTTHHHH-------------------------
T ss_pred             ChHHHHHHhCCCHHHHHHHHhcCCCcCC-CCCCccHHHHHHHcCCHHHHHHHHhc-------------------------
Confidence            45554332 3455555555555544322 23477777777777777777777632                         


Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcC
Q psy3308         573 KKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKN  652 (838)
Q Consensus       573 ~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~  652 (838)
                                       .++.++++|+++|.+|..|.||||+|+..|+.+++++|+++|++++..+..|.|||+.|+..+
T Consensus        56 -----------------~~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~  118 (277)
T d2fo1e1          56 -----------------EAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANR  118 (277)
T ss_dssp             -----------------HHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred             -----------------chhHHHHcCCCccccCCCCCeeeccccccccccccccccccccccccccccccccccchhhhc
Confidence                             335667788888888888889999998888888999999888888888888889999998888


Q ss_pred             cHHHHHHHHhCC---CCCCCCCCCCCcHHHHHHHcCc---HHHHHHHHhCCC--------CCCCCCCCCCcHhHHHHhcC
Q psy3308         653 QMDIATTLLEYN---AKPNAESKAGFTPLHLSAQEGH---TDMSSLLIEHGA--------TVSHQAKNGLTPLHLCAQED  718 (838)
Q Consensus       653 ~~~iv~~Ll~~~---~~~~~~~~~g~t~L~~A~~~g~---~~iv~~Ll~~g~--------~~~~~~~~~~t~l~~A~~~g  718 (838)
                      +.++++++...+   ..++..+..+.++...+...+.   ...+.++.+...        ..+..+..|.|||+.++..+
T Consensus       119 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~  198 (277)
T d2fo1e1         119 DFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVS  198 (277)
T ss_dssp             CHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSC
T ss_pred             chhhhhhhhhcccccccccccccccchhHHHHHhcccccccccccccccccccccccccccccccccCCCCccccccccc
Confidence            888888887643   3455667777888888887664   345555554432        22345668999999999999


Q ss_pred             CHHHHHH-HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         719 KVNVATI-TMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       719 ~~~i~~~-L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      +.+++++ +...+.+.+.+|..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+++|+.++|++|++.
T Consensus       199 ~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL~~c  276 (277)
T d2fo1e1         199 NMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC  276 (277)
T ss_dssp             CHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred             cccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence            9999886 4567888889999999999999999999999999999999999999999999999999999999999874

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.98  E-value=3.4e-32  Score=273.49  Aligned_cols=234  Identities=22%  Similarity=0.263  Sum_probs=205.0

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCc
Q psy3308         574 KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQ  653 (838)
Q Consensus       574 ~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~  653 (838)
                      .+.|+|+.|+..|+.++|++|+++|+++|..|.+|.|||++|+..|+.+++++|+++|++....+..+.+||+.++..++
T Consensus        39 ~~~t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~  118 (291)
T d1s70b_          39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY  118 (291)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred             CCchHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHhcCCceeeeeecccccccccccccccccccccccccc
Confidence            45689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCC
Q psy3308         654 MDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH-GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAE  732 (838)
Q Consensus       654 ~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~  732 (838)
                      .+++++|+++|...+..+..+.+++++|+..++.++++.++.. +.++....       ..............+......
T Consensus       119 ~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  191 (291)
T d1s70b_         119 LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAAR-------KEEERIMLRDARQWLNSGHIN  191 (291)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHH-------HHHHHHHHHHHHHHHHHTCCC
T ss_pred             cchhhcccccCcccccccccCccccccccccccchhcccccccccccccccc-------ccccccccccchhhhcccccc
Confidence            9999999999999999999999999999999999999998864 33221111       111111122344555666666


Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHH
Q psy3308         733 IDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATI  811 (838)
Q Consensus       733 ~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~  811 (838)
                      ....+..|.|||++|+..|+.+++++|+++|+++|.++..|+||||+|++.|+.++|++|+++|+|++.+|+.|+| +++
T Consensus       192 ~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~  271 (291)
T d1s70b_         192 DVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDV  271 (291)
T ss_dssp             CCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTS
T ss_pred             cccccCCCCChhhHHHHcCChhhhcccccceecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence            6677888999999999999999999999999999999999999999999999999999999999999999999999 999


Q ss_pred             HHH
Q psy3308         812 LVK  814 (838)
Q Consensus       812 ~~~  814 (838)
                      |++
T Consensus       272 A~e  274 (291)
T d1s70b_         272 ADE  274 (291)
T ss_dssp             CCS
T ss_pred             HHH
Confidence            964

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.97  E-value=2.9e-31  Score=266.64  Aligned_cols=242  Identities=25%  Similarity=0.324  Sum_probs=169.1

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCCH
Q psy3308          95 GFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHD  174 (838)
Q Consensus        95 ~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~  174 (838)
                      +.|+|+.||..|++++|++|+++|++++..|..|.|||++|+.+|+.++|++|+++|++....+..+.+||+.|+..|+.
T Consensus        40 ~~t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~~  119 (291)
T d1s70b_          40 DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYL  119 (291)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             CchHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHhcCCceeeeeeccccccccccccccccccccccccccc
Confidence            34778888888888888888888888888888888888888888888888888888877777777778888888888888


Q ss_pred             HHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCC-CCCcccCCCccHHHHHHhcCCHHHHHHHHHCCCCc
Q psy3308         175 NVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGA-GVDEITVDYLTALHVASHCGHVRVAKTLLDRKADP  253 (838)
Q Consensus       175 ~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~-~~~~~~~~~~~~l~~A~~~g~~~iv~~L~~~~~~~  253 (838)
                      +++++|++.|...+..+..+.+++++|+..++.++++.++.... .+.       ..........               
T Consensus       120 ~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~-------~~~~~~~~~~---------------  177 (291)
T d1s70b_         120 DIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIE-------AARKEEERIM---------------  177 (291)
T ss_dssp             HHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHH-------HHHHHHHHHH---------------
T ss_pred             chhhcccccCcccccccccCccccccccccccchhccccccccccccc-------cccccccccc---------------
Confidence            88888888777776667777777777777777777777664321 100       0000000000               


Q ss_pred             cccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCC
Q psy3308         254 NARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTES  333 (838)
Q Consensus       254 ~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~  333 (838)
                                                .......+..........+..|.|||+.|+..|+.+++++|++.|++++.++..
T Consensus       178 --------------------------~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~  231 (291)
T d1s70b_         178 --------------------------LRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYD  231 (291)
T ss_dssp             --------------------------HHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT
T ss_pred             --------------------------cccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccceecccccccC
Confidence                                      111233333444444445666777777777777777777777777777777777


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH
Q psy3308         334 GLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLR  388 (838)
Q Consensus       334 ~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~  388 (838)
                      |.||||+|+..|+.++|++|+++|++++..+..|.|||++|++    +++++|.+
T Consensus       232 g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~A~e----~~~~~L~~  282 (291)
T d1s70b_         232 GWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE----DILGYLEE  282 (291)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS----GGGHHHHH
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH----HHHHHHHH
Confidence            7777777777777777777777777777777777777777764    45555544

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=2.7e-30  Score=249.13  Aligned_cols=221  Identities=28%  Similarity=0.381  Sum_probs=201.1

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCC---
Q psy3308         526 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD---  602 (838)
Q Consensus       526 ~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~---  602 (838)
                      .+|||+|+..|+.++++.|++..                +..++.++.+|.||||+|+..|+.+++++|+++|++++   
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~~----------------~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~   64 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHSK----------------PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDD   64 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHC----------------GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGG
T ss_pred             CHhHHHHHHcCCHHHHHHHHHcC----------------CCcccccCCCCCCHHHHHHHcCCccccchhhhhhccccccc
Confidence            37999999999999999998743                23456788999999999999999999999999999986   


Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC--ccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy3308         603 SQGKNGVTPLHVASHYDHQNVALLLLDRGASPH--AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHL  680 (838)
Q Consensus       603 ~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~  680 (838)
                      ..+..|.+|+++++..+..++++.++..+...+  ..+..+.++++.++..++.+++++|++.|...+..+..|+|||++
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~  144 (229)
T d1ixva_          65 YPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHR  144 (229)
T ss_dssp             CCCTTSCCHHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccch
Confidence            456788999999999999999999999877544  455678899999999999999999999999999999999999999


Q ss_pred             HHHcCcHHHHHHHHhCC-CCCCCCCCCCCcHhHHHHhcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy3308         681 SAQEGHTDMSSLLIEHG-ATVSHQAKNGLTPLHLCAQEDKVNVATITMF-NGAEIDPVTKAGFTPLHIASHFGQLNMVRY  758 (838)
Q Consensus       681 A~~~g~~~iv~~Ll~~g-~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~-~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~  758 (838)
                      |+..|+.+++++|++.+ .+++.++..|.||||+|+..|+.+++++|++ .|++++.+|..|+|||++|+   +.+++++
T Consensus       145 a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~---~~~~~~~  221 (229)
T d1ixva_         145 AASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKF  221 (229)
T ss_dssp             HHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCS---CHHHHHH
T ss_pred             hhhcccccccccccccccccccccccccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHh---hHHHHHH
Confidence            99999999999999987 6789999999999999999999999999997 59999999999999999998   4689999


Q ss_pred             HHHCCCC
Q psy3308         759 LVENGAN  765 (838)
Q Consensus       759 Ll~~g~~  765 (838)
                      |+++|+|
T Consensus       222 Ll~~g~d  228 (229)
T d1ixva_         222 FLNNVVD  228 (229)
T ss_dssp             HHHHCCC
T ss_pred             HHHcCCC
Confidence            9999987

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=1.9e-30  Score=258.88  Aligned_cols=259  Identities=24%  Similarity=0.312  Sum_probs=199.8

Q ss_pred             CcHHHHHHH-cCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHH--------HHcCCCCccccCCCCcHHH
Q psy3308          96 FTPLYMAAQ-ENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELL--------ISKGANIEAKTRDGLTPLH  166 (838)
Q Consensus        96 ~t~l~~A~~-~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L--------~~~~~~~~~~~~~~~tal~  166 (838)
                      .||||+|++ .|+.++++.|.+.+++... +.+|.||||+||.+|+.++|++|        ++.|+++|.+|..|+||||
T Consensus         1 ~~p~~~~~~~~~~~~~~~~l~~~~~n~~~-~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh   79 (277)
T d2fo1e1           1 ESPIKLHTEAAGSYAITEPITRESVNIID-PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLM   79 (277)
T ss_dssp             CCCCHHHHHHHSSSCCCSCCSTTTTTTCC-CSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHH
T ss_pred             CChHHHHHHhCCCHHHHHHHHhcCCCcCC-CCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCCCCCeeec
Confidence            378886554 5777888888788776432 24699999999999999998777        5668888888889999999


Q ss_pred             HHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCC---CCCCcccCCCccHHHHHHhcCCHH--
Q psy3308         167 CAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHG---AGVDEITVDYLTALHVASHCGHVR--  241 (838)
Q Consensus       167 ~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~---~~~~~~~~~~~~~l~~A~~~g~~~--  241 (838)
                      +|+..|+.++|++|+++|++++.++..|.||+++|+..++.++++++...+   ..++..+....++...+...+..+  
T Consensus        80 ~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (277)
T d2fo1e1          80 LAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQV  159 (277)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHH
T ss_pred             cccccccccccccccccccccccccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhccccccc
Confidence            999999999999999998888888888888888888888888888876542   123333444555666655554422  


Q ss_pred             -HHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy3308         242 -VAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELL  320 (838)
Q Consensus       242 -iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L  320 (838)
                       .++++.+........                                 .....+..+..|.|+|+.++..++.++++++
T Consensus       160 ~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~  206 (277)
T d2fo1e1         160 ASAKLLVEKGAKVDYD---------------------------------GAARKDSEKYKGRTALHYAAQVSNMPIVKYL  206 (277)
T ss_dssp             HHHHHHHHHTCCSSCC---------------------------------SGGGTSSSSCCCCCTHHHHHSSCCHHHHHHH
T ss_pred             cccccccccccccccc---------------------------------ccccccccccCCCCccccccccccccccccc
Confidence             222222221110000                                 0111234466789999999999999999875


Q ss_pred             H-hCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH
Q psy3308         321 L-KYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLR  388 (838)
Q Consensus       321 ~-~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~  388 (838)
                      + ..+.+.+..+..|.|||+.|+..|+.++|++|+++|++++..+..|.|||++|+..|+.+++++|.+
T Consensus       207 l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL~~  275 (277)
T d2fo1e1         207 VGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR  275 (277)
T ss_dssp             HHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             cccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            5 6678888899999999999999999999999999999999999999999999999999999999985

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.96  E-value=2.6e-29  Score=238.37  Aligned_cols=205  Identities=30%  Similarity=0.387  Sum_probs=187.1

Q ss_pred             HHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCC
Q psy3308         588 MKIAQMLLQKDAPVDS-QGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK  666 (838)
Q Consensus       588 ~~~v~~Ll~~~~~~~~-~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~  666 (838)
                      .++|++|+++|+++|. .|.+|.||||+|+..|+.+++++|++.|++++..+..+.++++.++..++.............
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRAT   81 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTC
T ss_pred             HHHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccccccccccccccccccccccccccccccccccc
Confidence            5899999999999987 588999999999999999999999999999999999999999999999988877777664332


Q ss_pred             -CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q psy3308         667 -PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLH  745 (838)
Q Consensus       667 -~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~  745 (838)
                       .......+.++.+.+.......+.++|.+.+++++..+..|.|||+.|+..+..++++.|++.+.+++..|..|.||||
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~  161 (209)
T d1ot8a_          82 NLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLF  161 (209)
T ss_dssp             CTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred             ccccccccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccc
Confidence             3334456778999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHH
Q psy3308         746 IASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLL  792 (838)
Q Consensus       746 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L  792 (838)
                      +|+..|+.++|++|+++|++++.+|..|+||||+|+++|+.++|++|
T Consensus       162 ~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         162 LAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             hhccccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            99999999999999999999999999999999999999999999986

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5e-30  Score=244.89  Aligned_cols=192  Identities=27%  Similarity=0.325  Sum_probs=154.9

Q ss_pred             CCCcHHHHHHHcCCH----HHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy3308         607 NGVTPLHVASHYDHQ----NVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSA  682 (838)
Q Consensus       607 ~~~~~l~~A~~~~~~----~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~  682 (838)
                      +|.||||+|+..|+.    ++++++...|++++..+..|+||||+|+..|+.+++++|++.|++++.++..|.|||+.|+
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~   80 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC   80 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCCcccccccccccccccccccccccccccccccccccccccc
Confidence            467777777777764    4455566667777777778888888888888888888888888888888888888888888


Q ss_pred             HcCcHHHHHHHHhCCCCCC------CCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHH
Q psy3308         683 QEGHTDMSSLLIEHGATVS------HQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVT-KAGFTPLHIASHFGQLNM  755 (838)
Q Consensus       683 ~~g~~~iv~~Ll~~g~~~~------~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~-~~g~t~l~~A~~~g~~~~  755 (838)
                      ..++.+++++|++.+....      .....|.|||+.|+..++.+++++|+..|..++..+ .+|+||||+|+..|+.++
T Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~  160 (221)
T d1iknd_          81 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL  160 (221)
T ss_dssp             HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred             ccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHH
Confidence            8888888888887754432      234567899999999999999999999998887665 579999999999999999


Q ss_pred             HHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCC
Q psy3308         756 VRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQ  798 (838)
Q Consensus       756 v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~  798 (838)
                      +++|+++|+|++.+|..|+||||+|+..++.+++++|++.+.+
T Consensus       161 v~~Ll~~gad~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         161 VSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             HHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             HHHHHhcCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCc
Confidence            9999999999999999999999999999999999999998765

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.2e-28  Score=236.08  Aligned_cols=217  Identities=29%  Similarity=0.418  Sum_probs=187.7

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHh----CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHH
Q psy3308         574 KGFTPLHLAAKYGRMKIAQMLLQ----KDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAA  649 (838)
Q Consensus       574 ~~~~~l~~a~~~~~~~~v~~Ll~----~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~  649 (838)
                      +|.||||.|+..|+.+++++|++    .|+++|.++..|.||||+|+..|+.+++++|+++|++.+.....+.++++.|.
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~   81 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC   81 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhccccccccccccccccccccccccccccccccc
Confidence            58899999999999998888874    78899999999999999999999999999999999999988888999999999


Q ss_pred             HcCcHHHHHHHHhCCC----CCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCC-CCCCCCCcHhHHHHhcCCHHHHH
Q psy3308         650 KKNQMDIATTLLEYNA----KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVS-HQAKNGLTPLHLCAQEDKVNVAT  724 (838)
Q Consensus       650 ~~~~~~iv~~Ll~~~~----~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~-~~~~~~~t~l~~A~~~g~~~i~~  724 (838)
                      ..++.++++.+.....    ..+.......++|+.+.........+.|.....+.. .....+.++|+.|+..+...+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~  161 (228)
T d1k1aa_          82 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQ  161 (228)
T ss_dssp             HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred             ccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhh
Confidence            9999999888876432    234445566789999999898888888888766543 34557889999999999999999


Q ss_pred             HHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHH
Q psy3308         725 ITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIID  790 (838)
Q Consensus       725 ~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~  790 (838)
                      ++++.|..++.+|..|.|||++|+..|+.+++++|+++|+|++.+|.+|+||||+|+++|+.++||
T Consensus       162 ~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         162 LLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             HHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred             hhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCccccC
Confidence            999999999999999999999999999999999999999999999999999999999999988875

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.7e-27  Score=229.69  Aligned_cols=216  Identities=27%  Similarity=0.356  Sum_probs=195.8

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHh----CCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy3308         607 NGVTPLHVASHYDHQNVALLLLD----RGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSA  682 (838)
Q Consensus       607 ~~~~~l~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~  682 (838)
                      +|.||||+|+..|+.+++++|++    .|++++..+..|+||||+|+..|+.+++++|+++|++++..+..+.++++.|.
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~   81 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC   81 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhccccccccccccccccccccccccccccccccc
Confidence            68999999999999999998874    89999999999999999999999999999999999999999999999999999


Q ss_pred             HcCcHHHHHHHHhCCC----CCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCC-CCCCCCCcHHHHHHHcCCHHHHH
Q psy3308         683 QEGHTDMSSLLIEHGA----TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID-PVTKAGFTPLHIASHFGQLNMVR  757 (838)
Q Consensus       683 ~~g~~~iv~~Ll~~g~----~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~-~~~~~g~t~l~~A~~~g~~~~v~  757 (838)
                      ..++.++++.+.....    ..+.......++|+.+.........+.|.....+.. .....|.+||+.|+..+...+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~  161 (228)
T d1k1aa_          82 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQ  161 (228)
T ss_dssp             HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred             ccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhh
Confidence            9999999998876533    233445677889999999999999999998876654 35567899999999999999999


Q ss_pred             HHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHHcCCccCccc
Q psy3308         758 YLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVKNGAEIDPVT  823 (838)
Q Consensus       758 ~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~~~~~~~~~~  823 (838)
                      +++++|.+++.+|..|.|||++|+..|+.++|++|+++|+|++.+|.+|.| +++|+++|+ .++||
T Consensus       162 ~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~~~-~divk  227 (228)
T d1k1aa_         162 LLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRV-IDILR  227 (228)
T ss_dssp             HHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHH-HHHHT
T ss_pred             hhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCC-ccccC
Confidence            999999999999999999999999999999999999999999999999999 999998886 46553

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.6e-28  Score=232.84  Aligned_cols=192  Identities=27%  Similarity=0.349  Sum_probs=172.3

Q ss_pred             CCCcHHHHHHHcCcH----HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHH
Q psy3308         574 KGFTPLHLAAKYGRM----KIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAA  649 (838)
Q Consensus       574 ~~~~~l~~a~~~~~~----~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~  649 (838)
                      +|.||||+|+..|+.    ++++++...++++|.++..|.||||+|+..++.+++++|+++|++++..+..|.|||+.++
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~   80 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC   80 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCCcccccccccccccccccccccccccccccccccccccccc
Confidence            478999999999985    4566777789999999999999999999999999999999999999999999999999999


Q ss_pred             HcCcHHHHHHHHhCCCCCC------CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCcHhHHHHhcCCHHH
Q psy3308         650 KKNQMDIATTLLEYNAKPN------AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA-KNGLTPLHLCAQEDKVNV  722 (838)
Q Consensus       650 ~~~~~~iv~~Ll~~~~~~~------~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~t~l~~A~~~g~~~i  722 (838)
                      ..++.++++.|++.+....      .....|.|||+.|+..++.+++++|++.|+.++..+ ..|.||||.|+..|+.++
T Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~  160 (221)
T d1iknd_          81 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL  160 (221)
T ss_dssp             HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred             ccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHH
Confidence            9999999999999765533      234467899999999999999999999999988765 579999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy3308         723 ATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN  765 (838)
Q Consensus       723 ~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~  765 (838)
                      +++|+++|++++.++..|+||||+|+..++.+++++|++.+.+
T Consensus       161 v~~Ll~~gad~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         161 VSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             HHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             HHHHHhcCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCc
Confidence            9999999999999999999999999999999999999998654

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.7e-27  Score=211.17  Aligned_cols=153  Identities=26%  Similarity=0.382  Sum_probs=146.3

Q ss_pred             hHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHH
Q psy3308         643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNV  722 (838)
Q Consensus       643 t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i  722 (838)
                      +|||.|+..|+.++|++|+++|++++.+|..|.||||+|+ .|+.+++++|+++|++++..+..+.++++.++..++.++
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~   81 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDT   81 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-cccccccccccccccccccccccCccccccccccccccc
Confidence            7999999999999999999999999999999999999875 789999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCccCCCCCCcHHHHHHHhCcHHHHHHHHhCC
Q psy3308         723 ATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA-NVNATTNLGYTPLHQASQQGRVLIIDLLLGAG  796 (838)
Q Consensus       723 ~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g  796 (838)
                      ++.|+..+.+++..+..|.+|+++|+..++.+++++|+++|+ +++.+|..|.||||+|++.++.++|++|+++|
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_          82 LQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999976 89999999999999999999999999999987

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.94  E-value=2.1e-26  Score=218.05  Aligned_cols=197  Identities=32%  Similarity=0.395  Sum_probs=179.8

Q ss_pred             hcCCCccc-cCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CCccCCC
Q psy3308         563 ESGASITA-TTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGAS-PHAVAKN  640 (838)
Q Consensus       563 ~~~~~~~~-~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~  640 (838)
                      +.|.+++. .|..|.||||+|+..|+.+++++|++.|++++.++..+.++++.++..++............. .......
T Consensus        10 ~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (209)
T d1ot8a_          10 AQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHD   89 (209)
T ss_dssp             HHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTT
T ss_pred             HCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccc
Confidence            34455665 477899999999999999999999999999999999999999999999998877777665333 3334456


Q ss_pred             CChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCH
Q psy3308         641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKV  720 (838)
Q Consensus       641 ~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~  720 (838)
                      +.++.+.+.........+.|.+++++++.++..|.|||++|+..+..++++.|++.+.+++..+..|.||||+|+..|+.
T Consensus        90 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~  169 (209)
T d1ot8a_          90 GTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSY  169 (209)
T ss_dssp             CCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred             ccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccchhccccHH
Confidence            78899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy3308         721 NVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL  759 (838)
Q Consensus       721 ~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~L  759 (838)
                      +++++|+++|++++.+|..|+||||+|+++|+.++|++|
T Consensus       170 ~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         170 EASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            999999999999999999999999999999999999986

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.94  E-value=7.9e-30  Score=259.57  Aligned_cols=259  Identities=15%  Similarity=0.101  Sum_probs=153.9

Q ss_pred             cCcHHHHHHHHHCCCCcc-----------cCCCCCCcHHHHHHHcCcHHHHHH---HHHCCCCCCccccCCCcHHHHHHH
Q psy3308          72 TGQEEVAKILVDNGATIN-----------VQSLNGFTPLYMAAQENHDGVVRY---LLSKGGNQTLATEHNITPLHVACK  137 (838)
Q Consensus        72 ~g~~~~v~~l~~~~~~~~-----------~~~~~~~t~l~~A~~~g~~~~v~~---L~~~~~~~~~~~~~~~~~l~~Aa~  137 (838)
                      .+..++.+++..++++++           .++..|.|||++||.+|+.+++++   |+++|++++..+..|.||||+||+
T Consensus        56 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~  135 (346)
T d2ajaa1          56 KNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAE  135 (346)
T ss_dssp             SHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHcchhhccchhhhhhHHHhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHHH
Confidence            445666666655544333           445677888888888888877665   677888888888888888888888


Q ss_pred             cCCHHHHHHHHHcCCCCcccc--CCCCcHHHHHHHcCCHHHHHHHHHcCCCccC---CCCCCccHHHHHHhCCcHHHHHH
Q psy3308         138 WGKVAMVELLISKGANIEAKT--RDGLTPLHCAARSGHDNVIDILIEKGAALYS---KTKNGLAPLHMASQGDHEAATRV  212 (838)
Q Consensus       138 ~g~~~iv~~L~~~~~~~~~~~--~~~~tal~~A~~~g~~~iv~~L~~~~~~~~~---~~~~~~~~l~~A~~~g~~~~v~~  212 (838)
                      +||.++|++|+++|++++..+  .+|.||||+||++||.++|++|++.|+....   .+..+.++++.|+.+||.+++++
T Consensus       136 ~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~  215 (346)
T d2ajaa1         136 NGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINF  215 (346)
T ss_dssp             TTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCccccccccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHH
Confidence            888888888888888877654  3578888888888888888888888765421   22334566667777888888888


Q ss_pred             HHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCC
Q psy3308         213 LIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKA  292 (838)
Q Consensus       213 L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~  292 (838)
                      |+++|++++       ++...++..|+.++.+++.....    .......++..+...+..+...  .....        
T Consensus       216 Ll~~ga~~~-------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~a~~~~~~~~~~--~~~~~--------  274 (346)
T d2ajaa1         216 LLDCPVMLA-------YAEIHEFEYGEKYVNPFIARHVN----RLKEMHDAFKLSNPDGVFDLVT--KSECL--------  274 (346)
T ss_dssp             HTTSHHHHH-------HHHHCTTTTTTTTHHHHHHHHHH----HHHHHHTTTTTTSSSSCCCCSS--HHHHH--------
T ss_pred             HHhCCCCcc-------hHHHHHHHcCcHhhhHHHHHhhc----cchHHHHHHHHhcccccHhHHh--ccccc--------
Confidence            877765432       34455555555555555543210    0000000111111111000000  00000        


Q ss_pred             CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCc-----cccCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy3308         293 DPNARALNGFTPLHIACKKNRYKVVELLLKYGASI-----AATTESGLTPLHVASFMGCMNIAIFLLQ  355 (838)
Q Consensus       293 ~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~-----~~~~~~~~~~l~~A~~~g~~~iv~~Ll~  355 (838)
                          ....+.++++.|+..|+++++++|++.+...     +..+.++.||||+|++.|+.++|++|++
T Consensus       275 ----~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~  338 (346)
T d2ajaa1         275 ----QGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLS  338 (346)
T ss_dssp             ----HHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTT
T ss_pred             ----ccchhhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHHHHHHHhC
Confidence                0001124666677777777777777665432     2223356667777777777777776664

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.4e-26  Score=204.96  Aligned_cols=151  Identities=26%  Similarity=0.400  Sum_probs=139.4

Q ss_pred             hHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHH
Q psy3308         643 TPLHIAAKKNQMDIATTLLEY-NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVN  721 (838)
Q Consensus       643 t~L~~A~~~~~~~iv~~Ll~~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~  721 (838)
                      ++|+.|+..|+.++|+.|++. +.+++..|..|+|||++|+ .|+.+++++|++++++++..+..|.+|++.++..++.+
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~   82 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLD   82 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence            569999999999999999875 7899999999999999886 48889999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         722 VATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       722 i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      +++++++.|++++.+|..|+||||+|+..|+.+++++|+ .|++++.+|..|+||||+|++.|+.+++++|++|
T Consensus        83 ~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_          83 TLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             ccccccccccccccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            999999999999999999999999999999999999887 6899999999999999999999999999999986

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.94  E-value=5.4e-29  Score=253.38  Aligned_cols=225  Identities=16%  Similarity=0.143  Sum_probs=172.3

Q ss_pred             cCCCCCcHHHHHHHcCcHHHHHH---HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccC--CCCChHH
Q psy3308         571 TTKKGFTPLHLAAKYGRMKIAQM---LLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVA--KNGYTPL  645 (838)
Q Consensus       571 ~~~~~~~~l~~a~~~~~~~~v~~---Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~t~L  645 (838)
                      ++..|.|||+.|+.+|+.+++++   |++.|+++|.++..|.||||+|+..|+.++|++|+++|++++..+  ..|.|||
T Consensus        86 ~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L  165 (346)
T d2ajaa1          86 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAF  165 (346)
T ss_dssp             HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHH
T ss_pred             ccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCChh
Confidence            45577899999999999887766   788999999999999999999999999999999999999998765  3589999


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCCC---CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-------CCCCcHhHHHH
Q psy3308         646 HIAAKKNQMDIATTLLEYNAKPN---AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA-------KNGLTPLHLCA  715 (838)
Q Consensus       646 ~~A~~~~~~~iv~~Ll~~~~~~~---~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-------~~~~t~l~~A~  715 (838)
                      |+|+..|+.++|++|++.|++..   ..+..+.||++.|++.|+.++|++|+++|++++..+       ..+.++++.+.
T Consensus       166 ~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~  245 (346)
T d2ajaa1         166 RLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARH  245 (346)
T ss_dssp             HHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHH
T ss_pred             HHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcchHHHHHHHcCcHhhhHHHHHh
Confidence            99999999999999999987643   333456788888999999999999999988765322       22334445444


Q ss_pred             hcCCHHHHHHHHhCCCC--CCCCCC-------CCCcHHHHHHHcCCHHHHHHHHHCCCC-----CccCCCCCCcHHHHHH
Q psy3308         716 QEDKVNVATITMFNGAE--IDPVTK-------AGFTPLHIASHFGQLNMVRYLVENGAN-----VNATTNLGYTPLHQAS  781 (838)
Q Consensus       716 ~~g~~~i~~~L~~~~~~--~~~~~~-------~g~t~l~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~l~~A~  781 (838)
                      ..+..+....+.....+  .+..+.       .+.++++.|+..|+.+++++|++.+..     .+..+.+|+||||+|+
T Consensus       246 ~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~  325 (346)
T d2ajaa1         246 VNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLAL  325 (346)
T ss_dssp             HHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHH
T ss_pred             hccchHHHHHHHHhcccccHhHHhcccccccchhhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHH
Confidence            44444443333322222  111211       234788899999999999999998653     3445567999999999


Q ss_pred             HhCcHHHHHHHHhC
Q psy3308         782 QQGRVLIIDLLLGA  795 (838)
Q Consensus       782 ~~~~~~~v~~Ll~~  795 (838)
                      +.|+.++|++|++.
T Consensus       326 ~~Gn~e~v~lLL~~  339 (346)
T d2ajaa1         326 RLGNQGACALLLSI  339 (346)
T ss_dssp             HHTCTTHHHHHTTS
T ss_pred             HcCcHHHHHHHhCC
Confidence            99999999999974

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.4e-25  Score=200.06  Aligned_cols=150  Identities=27%  Similarity=0.393  Sum_probs=140.9

Q ss_pred             ChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHH
Q psy3308         642 YTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVN  721 (838)
Q Consensus       642 ~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~  721 (838)
                      .|||+.|++.|+.++|++|+++|++++ .+..|+||||+|+..++.++++.++............+.++++.++...+.+
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN   81 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHcCCCcc-cccCCCccccccccccccccccccccccccccccccccccccccccccccce
Confidence            389999999999999999999999877 6888999999999999999999999988888777888889999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHH
Q psy3308         722 VATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLL  792 (838)
Q Consensus       722 i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L  792 (838)
                      +++++..++.+++.++..|+||||+|+..|+.++|++|+++|++++.+|..|.|||++|+++|+.+++++|
T Consensus        82 ~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             eeecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.1e-25  Score=199.54  Aligned_cols=153  Identities=26%  Similarity=0.358  Sum_probs=104.8

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHH
Q psy3308         610 TPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDM  689 (838)
Q Consensus       610 ~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~i  689 (838)
                      +|||.|+..|+.++|++|+++|++++..+..|.||||.|+ .|+.+++++|++.|++++..+..|.++++.++..++.++
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~   81 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDT   81 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-cccccccccccccccccccccccCccccccccccccccc
Confidence            4666666666666666666666666666666666666553 566666666666666666666666667766666666666


Q ss_pred             HHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy3308         690 SSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGA-EIDPVTKAGFTPLHIASHFGQLNMVRYLVENG  763 (838)
Q Consensus       690 v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~-~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g  763 (838)
                      +++|++.+.+++..+..|.+|++.|+..++.+++++|++++. +++.+|..|+||||+|+..|+.++|++|+++|
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_          82 LQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            666666666666666667777777777777777776666654 56666777777777777777777777777765

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.2e-25  Score=195.73  Aligned_cols=151  Identities=29%  Similarity=0.421  Sum_probs=116.4

Q ss_pred             cHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHH
Q psy3308         610 TPLHVASHYDHQNVALLLLDR-GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD  688 (838)
Q Consensus       610 ~~l~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~  688 (838)
                      ++|+.|+..|+.++|++|+++ +++++..+..|+||||.|+ .|+.+++++|++++.+++..+..|.+|++.++..++.+
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~   82 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLD   82 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence            357777777777777777764 6677777777777777765 36677777777777777777777778888888888888


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy3308         689 MSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN  762 (838)
Q Consensus       689 iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~  762 (838)
                      ++++++++|++++.++..|.||||+|+..|+.+++++|+ .|++++.+|..|+||||+|+..|+.+|+++|++|
T Consensus        83 ~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_          83 TLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             ccccccccccccccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            888888888777777777888888888888888887776 5677777888888888888888888888888764

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=6.6e-24  Score=188.98  Aligned_cols=149  Identities=26%  Similarity=0.407  Sum_probs=105.4

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHH
Q psy3308         610 TPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDM  689 (838)
Q Consensus       610 ~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~i  689 (838)
                      |||+.|++.|+.++|++|+++|++++ .+..|.||||+|+..++.++++.++.........+..+.++++.++...+.++
T Consensus         4 t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (153)
T d1awcb_           4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANI   82 (153)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHcCCCcc-cccCCCcccccccccccccccccccccccccccccccccccccccccccccee
Confidence            56777777777777777777766655 46666777777777777777777776666656566666677777777777777


Q ss_pred             HHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy3308         690 SSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYL  759 (838)
Q Consensus       690 v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~L  759 (838)
                      +++|..+|++.+.++..|.||||+|+..|+.+++++|++.|++++.+|..|.|||++|+.+|+.+++++|
T Consensus        83 ~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          83 VEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             eecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            7777777777777777777777777777777777777777777777777777777777777777777765

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.9e-25  Score=184.70  Aligned_cols=120  Identities=23%  Similarity=0.317  Sum_probs=105.0

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCC-cHHHHHHHcCC
Q psy3308         674 GFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGF-TPLHIASHFGQ  752 (838)
Q Consensus       674 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~-t~l~~A~~~g~  752 (838)
                      +.++||.|+..|+.++|++|+++|++++.++..|.||+|.|+ .|+.+++++|+++|++++.++..|. ||||+|+..|+
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~   81 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF   81 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            357888888888888888888888888888888888888664 6888899999988888888888766 59999999999


Q ss_pred             HHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHh
Q psy3308         753 LNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG  794 (838)
Q Consensus       753 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~  794 (838)
                      .+++++|+++|++++.+|..|+||||+|+++|+.+++++|+.
T Consensus        82 ~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          82 LDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             ccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            999999999999999999999999999999999999999875

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=7.2e-25  Score=183.19  Aligned_cols=104  Identities=24%  Similarity=0.359  Sum_probs=51.5

Q ss_pred             cHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHH
Q psy3308         709 TPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLI  788 (838)
Q Consensus       709 t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~  788 (838)
                      |||++|++.|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+++|+.++
T Consensus         4 tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~~   83 (118)
T d1myoa_           4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSC   83 (118)
T ss_dssp             HHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCHH
T ss_pred             hHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeeecccccccchhhhhhcCchhh
Confidence            34444444444444444444444444444444455555554455555555555555555444445555555555555555


Q ss_pred             HHHHHhCCCCCCCCCCccch-HHHH
Q psy3308         789 IDLLLGAGAQPNATTNLFCC-ATIL  812 (838)
Q Consensus       789 v~~Ll~~ga~~~~~~~~~~~-~~~~  812 (838)
                      |++|+++|+|++.+|.+|.| +++|
T Consensus        84 v~~Ll~~Gad~~~~d~~G~t~l~~a  108 (118)
T d1myoa_          84 VKLLLSKGADKTVKGPDGLTALEAT  108 (118)
T ss_dssp             HHHHHTTCCCSSSSSSSTCCCCCTC
T ss_pred             hhhhhcccccceeeCCCCCCHHHHH
Confidence            55555555555555555554 4443

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6.7e-24  Score=179.53  Aligned_cols=120  Identities=28%  Similarity=0.404  Sum_probs=107.1

Q ss_pred             CChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCC-cHhHHHHhcCC
Q psy3308         641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGL-TPLHLCAQEDK  719 (838)
Q Consensus       641 ~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~-t~l~~A~~~g~  719 (838)
                      +.++||.|+..|++++|++|+++|++++.++..|.|||+.|+ .|+.+++++|+++|++++.++..+. ||||+|++.|+
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~   81 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF   81 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            457899999999999999999999999999999999998664 6899999999999999998888766 59999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy3308         720 VNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE  761 (838)
Q Consensus       720 ~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~  761 (838)
                      .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+.
T Consensus        82 ~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          82 LDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             ccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            999999999999999999999999999999999999999874

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=5.5e-24  Score=177.76  Aligned_cols=106  Identities=24%  Similarity=0.381  Sum_probs=104.2

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy3308         676 TPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNM  755 (838)
Q Consensus       676 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~  755 (838)
                      |||++|++.|+.++|++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus         4 tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~~   83 (118)
T d1myoa_           4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSC   83 (118)
T ss_dssp             HHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCHH
T ss_pred             hHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeeecccccccchhhhhhcCchhh
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHCCCCCccCCCCCCcHHHHHH
Q psy3308         756 VRYLVENGANVNATTNLGYTPLHQAS  781 (838)
Q Consensus       756 v~~Ll~~g~~~~~~~~~g~t~l~~A~  781 (838)
                      +++|+++|++++.+|.+|.|||++|.
T Consensus        84 v~~Ll~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          84 VKLLLSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             HHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred             hhhhhcccccceeeCCCCCCHHHHHh
Confidence            99999999999999999999999984

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.9e-23  Score=176.74  Aligned_cols=120  Identities=25%  Similarity=0.339  Sum_probs=96.7

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy3308         676 TPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNM  755 (838)
Q Consensus       676 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~  755 (838)
                      ++|+.|+..|+.++|++|+++|++++.++..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.+|+.++
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~   82 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV   82 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccccccccccccccCcccccccchhhHHHH
Confidence            56778888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHCCCCCccCCC-CCCcHHHHH--HHhCcHHHHHHHHhC
Q psy3308         756 VRYLVENGANVNATTN-LGYTPLHQA--SQQGRVLIIDLLLGA  795 (838)
Q Consensus       756 v~~Ll~~g~~~~~~~~-~g~t~l~~A--~~~~~~~~v~~Ll~~  795 (838)
                      |++|+++|++++..+. .|.||+.+|  ++.|+.+++++|+..
T Consensus        83 v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          83 CKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             HHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             HHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence            8888888888887664 477776655  466788888888764

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=4.6e-23  Score=205.66  Aligned_cols=187  Identities=16%  Similarity=0.168  Sum_probs=100.3

Q ss_pred             HHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCc-------HHHHHHHH
Q psy3308         590 IAQMLLQKDAPVDSQ-GKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQ-------MDIATTLL  661 (838)
Q Consensus       590 ~v~~Ll~~~~~~~~~-~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~-------~~iv~~Ll  661 (838)
                      +...+...+.++|.. |..|.||||+|+..|+.++|++|+++|++++..+..|+||||.|+..++       .+++++|.
T Consensus        88 ~~~~~~~~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~  167 (301)
T d1sw6a_          88 VNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY  167 (301)
T ss_dssp             HHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG
T ss_pred             HHhcCCccCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHh
Confidence            333333456677754 7778888888888888888888888888888888888888888877654       24444443


Q ss_pred             hCCCCCCCCCCCCCcHHHHHHHcCc----HH--------HHHHHHhCCCCC-CCCCCCCCcHhHHHHhcCCHHHHH----
Q psy3308         662 EYNAKPNAESKAGFTPLHLSAQEGH----TD--------MSSLLIEHGATV-SHQAKNGLTPLHLCAQEDKVNVAT----  724 (838)
Q Consensus       662 ~~~~~~~~~~~~g~t~L~~A~~~g~----~~--------iv~~Ll~~g~~~-~~~~~~~~t~l~~A~~~g~~~i~~----  724 (838)
                      +   .+...+..|+||||+++..+.    ..        ++.++...+... ......+.++++.+........+.    
T Consensus       168 ~---~~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (301)
T d1sw6a_         168 P---CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDL  244 (301)
T ss_dssp             G---GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSH
T ss_pred             h---hhhhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhh
Confidence            3   234556677788877765432    22        233444433222 122223333333333332222111    


Q ss_pred             -HHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHH
Q psy3308         725 -ITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQAS  781 (838)
Q Consensus       725 -~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~  781 (838)
                       .++.  ..+|.+|..|+||||+|++.|+.++|++|+++|++++.+|+.|+|||++|+
T Consensus       245 ~~~~~--~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         245 KWIIA--NMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             HHHHH--HTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             HHHHh--cCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence             1111  124555666666666666666666666666666666666666666666553

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=9.3e-23  Score=203.44  Aligned_cols=184  Identities=15%  Similarity=0.108  Sum_probs=132.1

Q ss_pred             HHHHhCCCCCCcc-CCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCc-------HHHHHHHHhC
Q psy3308         625 LLLLDRGASPHAV-AKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGH-------TDMSSLLIEH  696 (838)
Q Consensus       625 ~~Ll~~g~~~~~~-~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~-------~~iv~~Ll~~  696 (838)
                      ..+...+++++.. |..|+||||+|+..|+.++|++|+++|++++.+|..|+||||.|+..++       .+++++|.+ 
T Consensus        90 ~~~~~~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~-  168 (301)
T d1sw6a_          90 DAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP-  168 (301)
T ss_dssp             HHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG-
T ss_pred             hcCCccCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhh-
Confidence            3333457788865 8899999999999999999999999999999999999999999998775       356666654 


Q ss_pred             CCCCCCCCCCCCcHhHHHHhcCC----HH--------HHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHH-----H
Q psy3308         697 GATVSHQAKNGLTPLHLCAQEDK----VN--------VATITMFNGAEI-DPVTKAGFTPLHIASHFGQLNMVR-----Y  758 (838)
Q Consensus       697 g~~~~~~~~~~~t~l~~A~~~g~----~~--------i~~~L~~~~~~~-~~~~~~g~t~l~~A~~~g~~~~v~-----~  758 (838)
                        .++..+..|+||||+++..+.    ..        ++.++...+... ......+.++++.+........+.     +
T Consensus       169 --~~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (301)
T d1sw6a_         169 --CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKW  246 (301)
T ss_dssp             --GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHH
T ss_pred             --hhhhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHH
Confidence              345678889999999986543    22        334555544332 233444555666555444333222     2


Q ss_pred             HHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHH
Q psy3308         759 LVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILV  813 (838)
Q Consensus       759 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~  813 (838)
                      ++.  ..+|.+|..|+||||+|++.|+.++|++|+++|||++++|+.|.| ++||+
T Consensus       247 ~~~--~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         247 IIA--NMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             HHH--HTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             HHh--cCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence            332  237889999999999999999999999999999999999999999 98874

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.1e-22  Score=170.33  Aligned_cols=120  Identities=23%  Similarity=0.324  Sum_probs=97.7

Q ss_pred             hHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHH
Q psy3308         643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNV  722 (838)
Q Consensus       643 t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i  722 (838)
                      ++|+.|+..|++++|++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.++
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~   82 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV   82 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccccccccccccccCcccccccchhhHHHH
Confidence            56788888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHhCCCCCCCCCC-CCCcHHHHH--HHcCCHHHHHHHHHC
Q psy3308         723 ATITMFNGAEIDPVTK-AGFTPLHIA--SHFGQLNMVRYLVEN  762 (838)
Q Consensus       723 ~~~L~~~~~~~~~~~~-~g~t~l~~A--~~~g~~~~v~~Ll~~  762 (838)
                      +++|+++|++++..+. .|+||+..+  +..|+.+++++|++.
T Consensus        83 v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          83 CKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             HHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             HHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence            8888888888887654 477776654  567888888888764

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=1.5e-21  Score=170.06  Aligned_cols=122  Identities=19%  Similarity=0.208  Sum_probs=96.5

Q ss_pred             HHHHHHcCcHHHHHHHHhCCCCCCCC------CCCCCcHhHHHHhc---CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy3308         678 LHLSAQEGHTDMSSLLIEHGATVSHQ------AKNGLTPLHLCAQE---DKVNVATITMFNGAEIDPVTKAGFTPLHIAS  748 (838)
Q Consensus       678 L~~A~~~g~~~iv~~Ll~~g~~~~~~------~~~~~t~l~~A~~~---g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~  748 (838)
                      |..|++.++...+..++..|++++..      +..|.||||+|++.   |+.+++++|+++|++++.+|..|+||||+|+
T Consensus        10 L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A~   89 (154)
T d1dcqa1          10 LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCC   89 (154)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHH
T ss_pred             HHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhcccccccc
Confidence            44555666666565555555554432      55678888888864   6778888888888888888888999999999


Q ss_pred             HcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCC
Q psy3308         749 HFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP  799 (838)
Q Consensus       749 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~  799 (838)
                      ..|+.+++++|+++|++++.+|..|+||||+|++.|+.+++++|++.++..
T Consensus        90 ~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~  140 (154)
T d1dcqa1          90 LTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR  140 (154)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred             ccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC
Confidence            999999999999999999999999999999999999999999999876543

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=2.6e-20  Score=162.19  Aligned_cols=121  Identities=20%  Similarity=0.273  Sum_probs=103.5

Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCCCCC------CCCCCcHHHHHHHc---CcHHHHHHHHhCCCCCCCCCCCCCcHhHHH
Q psy3308         644 PLHIAAKKNQMDIATTLLEYNAKPNAE------SKAGFTPLHLSAQE---GHTDMSSLLIEHGATVSHQAKNGLTPLHLC  714 (838)
Q Consensus       644 ~L~~A~~~~~~~iv~~Ll~~~~~~~~~------~~~g~t~L~~A~~~---g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A  714 (838)
                      .|..|++.+++..+..++..|.+++..      +..|+||||+|++.   ++.++|++|+++|++++.++..|.||||+|
T Consensus         9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A   88 (154)
T d1dcqa1           9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC   88 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHH
T ss_pred             HHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhccccccc
Confidence            455677888888888888877776544      56788999999874   678899999999999999999999999999


Q ss_pred             HhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q psy3308         715 AQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA  764 (838)
Q Consensus       715 ~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~  764 (838)
                      +..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.++
T Consensus        89 ~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~  138 (154)
T d1dcqa1          89 CLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS  138 (154)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             cccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999998754