Psyllid ID: psy3590

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDSSELEEKLKDAKMSNMRHRKILAERENELQALLSRLGSESLALPSSGPHGKTPPGQPPGKSLPSALKPPQPEALTVVKRELLVPNNHGILSEDPFYYWKALCHALKHLKRLLQSQHYEMMLKQTNPVMVRPATHYQVDLMRSACQDYWILSGWP
Secondary Structure (PSIPRED)
cEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEccccEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEccccHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mfgaflawetrhvsipalndskyvgMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCTTATLCLVFVPkivelkrnpqgsidKRIRAtlrpmsktrrdsSELEEKLKDAKMSNMRHRKILAERENELQALLSRLGseslalpssgphgktppgqppgkslpsalkppqpealTVVKREllvpnnhgilsedpFYYWKALCHALKHLKRLLQSQHYEMMLkqtnpvmvrpatHYQVDLMRSACQDYWILSGWP
Flexible Loop (DISEMBL)
MFGAFLAWETRhvsipalndskyVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCTTATLCLVFVPKivelkrnpqgsidkriratlrpmsktrrdsseleeklkdakmsnmRHRKILAERENELQALLSRLGSESLALPSSGPHGKTPPGQPPGKSLPSALKPPQPEALTVVKRELLVPNNHGILSEDPFYYWKALCHALKHLKRLLQSQHYEMMLKQTNPVMVRPATHYQVDLMRSACQDYWILSGWP
Low Complexity Region (SEG)
MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDSSELEEKLKDAKMSNMRHRKILAERENELQALLSRLGSESLALPSSGPHGKTPPGQPPGKSLPSALKPPQPEALTVVKRELLVPNNHGILSEDPFYYWKALCHALKHLKRLLQSQHYEMMLKQTNPVMVRPATHYQVDLMRSACQDYWILSGWP
Disordered region (IsUnstruct)
**GAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCTTATLCLVFVPKIVELK*************************************************************************************************LTVVKRELLVPNNHGILSEDPFYYWKALCHALKHLKRLLQSQHYEMMLKQTNPVMVRPATHYQVDLMRSACQDYWILSG**
Disordered Region (DISOPRED)
MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCTTATLCLVFVPKIVELKRN**********************************************************************************************************************YWKALC*******************KQTNPVMVRPATHYQVDLMRSACQDYWILSGWP
Disordered Region (DISEMBL)
MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRP*************KLKDAKMSNMRHRKILAERENELQALLSRLGSESLAL****************KSLPSALKPPQPEALTVVKRELLVPNNHGILSEDPFYYWKALCHALKHLKRLLQSQHYEMMLKQTNPVMVRPATHYQVDLMRSACQDYWILSGWP
Disordered Region (DISPRO)
MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCTTATLCLVFVPKIVELKRNP***********************ELEEKLKDAKMSNMRHRKILAERENELQALLSRLGSE*****************************************L***N**GILSEDPFYYWKALCHALKHLKRLLQSQHYEMMLKQTNPVMVRPATHYQVDLMRSACQDYWILSGWP
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPxxxxxxxxxxxxxxxxxxxxxNMRHRKILAERENELQALLSRLGSESLALPSSGPHGKTPPGQPPGKSLPSALKPPQPEALTVVKRELLVPNNHGILSEDPFYYWKALCHALKHLKRLLQSQHYEMMLKQTNPVMVRPATHYQVDLMRSACQDYWILSGWP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	258	2.2.26 [Sep-21-2011]
O75899	941	Gamma-aminobutyric acid t	yes	N/A	0.542	0.148	0.439	7e-31
O88871	940	Gamma-aminobutyric acid t	yes	N/A	0.542	0.148	0.439	8e-31
Q80T41	940	Gamma-aminobutyric acid t	yes	N/A	0.542	0.148	0.439	9e-31
Q9UBS5	961	Gamma-aminobutyric acid t	no	N/A	0.620	0.166	0.350	1e-18
Q9Z0U4	991	Gamma-aminobutyric acid t	no	N/A	0.604	0.157	0.353	6e-18
Q9WV18	960	Gamma-aminobutyric acid t	no	N/A	0.604	0.162	0.353	7e-18
Q54ET0	816	Metabotropic glutamate re	yes	N/A	0.414	0.131	0.311	4e-10
Q54F54	1407	Metabotropic glutamate re	no	N/A	0.313	0.057	0.313	6e-05
Q54QG7	891	Metabotropic glutamate re	no	N/A	0.399	0.115	0.301	7e-05
Q54SH7	800	Metabotropic glutamate re	no	N/A	0.461	0.148	0.25	0.0001

>sp|O75899|GABR2_HUMAN Gamma-aminobutyric acid type B receptor subunit 2 OS=Homo sapiens GN=GABBR2 PE=1 SV=1

 Score =  134 bits (336), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 98/148 (66%), Gaps = 8/148 (5%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +FG FLAWETR+VSIPALNDSKY+GMSVYNV +MCI+GAA+SF+  D+ +  F I++L I
Sbjct: 669 LFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAVSFLTRDQPNVQFCIVALVI 728

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSI-DKRIRATLRPMSKTRRDSSEL-------EEKL 112
           +FC+T TLCLVFVPK++ L+ NP  +  ++R + T     +  + S+ +         +L
Sbjct: 729 IFCSTITLCLVFVPKLITLRTNPDAATQNRRFQFTQNQKKEDSKTSTSVTSVNQASTSRL 788

Query: 113 KDAKMSNMRHRKILAERENELQALLSRL 140
           +  +  N R R  + E + +L+ +  +L
Sbjct: 789 EGLQSENHRLRMKITELDKDLEEVTMQL 816

Receptor for GABA. The activity of this receptor is mediated by G-proteins that inhibit adenylyl cyclase activity, stimulates phospholipase A2, activates potassium channels, inactivates voltage-dependent calcium-channels and modulates inositol phospholipids hydrolysis. Plays a critical role in the fine-tuning of inhibitory synaptic transmission. Pre-synaptic GABA-B-R inhibit neurotransmitter release by down-regulating high-voltage activated calcium channels, whereas postsynaptic GABA-B-R decrease neuronal excitability by activating a prominent inwardly rectifying potassium (Kir) conductance that underlies the late inhibitory postsynaptic potentials. Not only implicated in synaptic inhibition but also in hippocampal long-term potentiation, slow wave sleep, muscle relaxation and antinociception.
Homo sapiens (taxid: 9606)

>sp|O88871|GABR2_RAT Gamma-aminobutyric acid type B receptor subunit 2 OS=Rattus norvegicus GN=Gabbr2 PE=1 SV=2

 Score =  134 bits (336), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 98/148 (66%), Gaps = 8/148 (5%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +FG FLAWETR+VSIPALNDSKY+GMSVYNV +MCI+GAA+SF+  D+ +  F I++L I
Sbjct: 668 LFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAVSFLTRDQPNVQFCIVALVI 727

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSI-DKRIRATLRPMSKTRRDSSEL-------EEKL 112
           +FC+T TLCLVFVPK++ L+ NP  +  ++R + T     +  + S+ +         +L
Sbjct: 728 IFCSTITLCLVFVPKLITLRTNPDAATQNRRFQFTQNQKKEDSKTSTSVTSVNQASTSRL 787

Query: 113 KDAKMSNMRHRKILAERENELQALLSRL 140
           +  +  N R R  + E + +L+ +  +L
Sbjct: 788 EGLQSENHRLRMKITELDKDLEEVTMQL 815

Receptor for GABA. The activity of this receptor is mediated by G-proteins that inhibit adenylyl cyclase activity, stimulates phospholipase A2, activates potassium channels, inactivates voltage-dependent calcium-channels and modulates inositol phospholipids hydrolysis. Plays a critical role in the fine-tuning of inhibitory synaptic transmission. Pre-synaptic GABA-B-R inhibit neurotransmitter release by down-regulating high-voltage activated calcium channels, whereas postsynaptic GABA-B-R decrease neuronal excitability by activating a prominent inwardly rectifying potassium (Kir) conductance that underlies the late inhibitory postsynaptic potentials. Not only implicated in synaptic inhibition but also in hippocampal long-term potentiation, slow wave sleep, muscle relaxation and antinociception.

Rattus norvegicus (taxid: 10116)

>sp|Q80T41|GABR2_MOUSE Gamma-aminobutyric acid type B receptor subunit 2 OS=Mus musculus GN=Gabbr2 PE=2 SV=2

 Score =  134 bits (336), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 98/148 (66%), Gaps = 8/148 (5%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +FG FLAWETR+VSIPALNDSKY+GMSVYNV +MCI+GAA+SF+  D+ +  F I++L I
Sbjct: 668 LFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAVSFLTRDQPNVQFCIVALVI 727

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSI-DKRIRATLRPMSKTRRDSSEL-------EEKL 112
           +FC+T TLCLVFVPK++ L+ NP  +  ++R + T     +  + S+ +         +L
Sbjct: 728 IFCSTITLCLVFVPKLITLRTNPDAATQNRRFQFTQNQKKEDSKTSTSVTSVNQASTSRL 787

Query: 113 KDAKMSNMRHRKILAERENELQALLSRL 140
           +  +  N R R  + E + +L+ +  +L
Sbjct: 788 EGLQSENHRLRMKITELDKDLEEVTMQL 815

Receptor for GABA. The activity of this receptor is mediated by G-proteins that inhibit adenylyl cyclase activity, stimulates phospholipase A2, activates potassium channels, inactivates voltage-dependent calcium-channels and modulates inositol phospholipids hydrolysis. Plays a critical role in the fine-tuning of inhibitory synaptic transmission. Pre-synaptic GABA-B-R inhibit neurotransmitter release by down-regulating high-voltage activated calcium channels, whereas postsynaptic GABA-B-R decrease neuronal excitability by activating a prominent inwardly rectifying potassium (Kir) conductance that underlies the late inhibitory postsynaptic potentials. Not only implicated in synaptic inhibition but also in hippocampal long-term potentiation, slow wave sleep, muscle relaxation and antinociception.

Mus musculus (taxid: 10090)

>sp|Q9UBS5|GABR1_HUMAN Gamma-aminobutyric acid type B receptor subunit 1 OS=Homo sapiens GN=GABBR1 PE=1 SV=1

 Score = 93.2 bits (230), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 94/171 (54%), Gaps = 11/171 (6%)

Query: 5   FLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCT 64
           FLA+ET+ VS   +ND + VGM++YNV ++C++ A ++ ++S +QDA+F   SL I+F +
Sbjct: 786 FLAYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQQDAAFAFASLAIVFSS 845

Query: 65  TATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDSSELEEKLKDAKMSNMRHRK 124
             TL ++FVPK+  L    +G      + T++  S T  +    EEK +  +  N    K
Sbjct: 846 YITLVVLFVPKMRRLI--TRGEWQSEAQDTMKTGSSTNNNE---EEKSRLLEKENRELEK 900

Query: 125 ILAERENELQALLSRLGSESLALPSSGPHGKTPPGQPPGKSLPSALKPPQP 175
           I+AE+E  +  L  +L  +S     S  H  TPP   P   LP    PP+P
Sbjct: 901 IIAEKEERVSELRHQL--QSRQQLRSRRHPPTPP--EPSGGLPRG--PPEP 945

Isoform 1E function may be to regulate the availability of functional GABA-B-R1A/GABA-B-R2 heterodimers by competing for GABA-B-R2 dimerization. This could explain the observation that certain small molecule ligands exhibit differential affinity for central versus peripheral sites.

Homo sapiens (taxid: 9606)

>sp|Q9Z0U4|GABR1_RAT Gamma-aminobutyric acid type B receptor subunit 1 OS=Rattus norvegicus GN=Gabbr1 PE=1 SV=1

 Score = 91.3 bits (225), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 92/167 (55%), Gaps = 11/167 (6%)

Query: 5   FLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCT 64
           FLA+ET+ VS   +ND + VGM++YNV ++C++ A ++ ++S +QDA+F   SL I+F +
Sbjct: 816 FLAYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQQDAAFAFASLAIVFSS 875

Query: 65  TATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDSSELEEKLKDAKMSNMRHRK 124
             TL ++FVPK+  L    +G      + T++  S T  +    EEK +  +  N    K
Sbjct: 876 YITLVVLFVPKMRRLI--TRGEWQSETQDTMKTGSSTNNNE---EEKSRLLEKENRELEK 930

Query: 125 ILAERENELQALLSRLGSESLALPSSGPHGKTPP----GQPPGKSLP 167
           I+AE+E  +  L  +L  +S     S  H  TPP    G P G S P
Sbjct: 931 IIAEKEERVSELRHQL--QSRQQLRSRRHPPTPPDPSGGLPRGPSEP 975

Receptor for GABA. The activity of this receptor is mediated by G-proteins that inhibit adenylyl cyclase activity, stimulates phospholipase A2, activates potassium channels, inactivates voltage-dependent calcium-channels and modulates inositol phospholipids hydrolysis. Plays a critical role in the fine-tuning of inhibitory synaptic transmission. Pre-synaptic GABA-B-R inhibit neurotransmitter release by down-regulating high-voltage activated calcium channels, whereas postsynaptic GABA-B-R decrease neuronal excitability by activating a prominent inwardly rectifying potassium (Kir) conductance that underlies the late inhibitory postsynaptic potentials. Not only implicated in synaptic inhibition but also in hippocampal long-term potentiation, slow wave sleep, muscle relaxation and antinociception.

Rattus norvegicus (taxid: 10116)

>sp|Q9WV18|GABR1_MOUSE Gamma-aminobutyric acid type B receptor subunit 1 OS=Mus musculus GN=Gabbr1 PE=1 SV=1

 Score = 91.3 bits (225), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 92/167 (55%), Gaps = 11/167 (6%)

Query: 5   FLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCT 64
           FLA+ET+ VS   +ND + VGM++YNV ++C++ A ++ ++S +QDA+F   SL I+F +
Sbjct: 785 FLAYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQQDAAFAFASLAIVFSS 844

Query: 65  TATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDSSELEEKLKDAKMSNMRHRK 124
             TL ++FVPK+  L    +G      + T++  S T  +    EEK +  +  N    K
Sbjct: 845 YITLVVLFVPKMRRLI--TRGEWQSEAQDTMKTGSSTNNNE---EEKSRLLEKENRELEK 899

Query: 125 ILAERENELQALLSRLGSESLALPSSGPHGKTPP----GQPPGKSLP 167
           I+AE+E  +  L  +L  +S     S  H  TPP    G P G S P
Sbjct: 900 IIAEKEERVSELRHQL--QSRQQIRSRRHPPTPPDPSGGLPRGPSEP 944

Receptor for GABA. The activity of this receptor is mediated by G-proteins that inhibit adenylyl cyclase activity, stimulates phospholipase A2, activates potassium channels, inactivates voltage-dependent calcium-channels and modulates inositol phospholipids hydrolysis. Plays a critical role in the fine-tuning of inhibitory synaptic transmission. Pre-synaptic GABA-B-R inhibit neurotransmitter release by down-regulating high-voltage activated calcium channels, whereas postsynaptic GABA-B-R decrease neuronal excitability by activating a prominent inwardly rectifying potassium (Kir) conductance that underlies the late inhibitory postsynaptic potentials. Not only implicated in synaptic inhibition but also in hippocampal long-term potentiation, slow wave sleep, muscle relaxation and antinociception.

Mus musculus (taxid: 10090)

>sp|Q54ET0|GRLE_DICDI Metabotropic glutamate receptor-like protein E OS=Dictyostelium discoideum GN=grlE PE=2 SV=2

 Score = 65.1 bits (157), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 68/109 (62%), Gaps = 2/109 (1%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +FG FLA++TR+V + +LN+SK + +++YN+  + ++  A+ F++ D   A  VI ++ I
Sbjct: 604 LFGVFLAFKTRNV-VDSLNESKPITLALYNLTFVMVVAIALGFILRDNPIAIIVIQTIAI 662

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDSSELE 109
           L   T T+ ++F+PK+  +    Q S+D  I  ++  M ++  +++E E
Sbjct: 663 LLGFTVTVSVLFLPKVWMILSGQQHSMDS-IGTSMDSMGRSNGNTTEAE 710

May be involved in early development in cAMP sensing and subsequent chemotactic response. Probable receptor of GABA and glutamate, leading respectively to the induction or inhibition of SDF-2 formation.

Dictyostelium discoideum (taxid: 44689)

>sp|Q54F54|GRLP_DICDI Metabotropic glutamate receptor-like protein P OS=Dictyostelium discoideum GN=grlP PE=2 SV=1

 Score = 48.1 bits (113), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 2/83 (2%)

Query: 1   MFGAFLAWETRHV-SIPA-LNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISL 58
           +FG +L    R   SIP   N++ Y+G+ +YN  ++ I+   +++V +    A+F+I S+
Sbjct: 866 LFGCYLVIVCRKFRSIPGTFNEATYIGILIYNYTVVLIVAIPLAYVFNKNPLANFLIFSI 925

Query: 59  FILFCTTATLCLVFVPKIVELKR 81
            I+    +T+ L+F+PK   L R
Sbjct: 926 SIIVFVLSTIILLFIPKFHFLLR 948

Dictyostelium discoideum (taxid: 44689)

>sp|Q54QG7|GRLN_DICDI Metabotropic glutamate receptor-like protein N OS=Dictyostelium discoideum GN=grlN PE=2 SV=1

 Score = 48.1 bits (113), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 3/106 (2%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           M G F++W+ R V I   N+SK V  S+Y++V   ++ A ++  IS     + ++ S FI
Sbjct: 571 MIGIFVSWKIRIVDIEEFNESKSVAYSLYSIVFCLLIIAPLT--ISKTGHNTEILCSGFI 628

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDSS 106
            F   A + ++F+PK   LK       ++  R +    SK +  SS
Sbjct: 629 -FIVAAIITIMFIPKFWALKIYGAEGSNEIFRQSSSSTSKRKNKSS 673

Dictyostelium discoideum (taxid: 44689)

>sp|Q54SH7|GRLC_DICDI Metabotropic glutamate receptor-like protein C OS=Dictyostelium discoideum GN=grlC PE=2 SV=1

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 1/120 (0%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           + G F++W+ R V I   N+SK +  ++Y +     +   +     DKQ  + V+ +   
Sbjct: 565 LVGVFVSWKIRIVDIQEFNESKAIANTLYAISFCLFVIVPLMISPQDKQSETIVLCTAG- 623

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDSSELEEKLKDAKMSNM 120
           LF TTA L ++F PK   +     G  +   R     ++  R +SS+     K  +  N+
Sbjct: 624 LFITTAALLIIFTPKFWRVFTLGDGGTNDMFRKKQSNVATARAESSKSSSGPKLNRRGNL 683

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
345491324	1283	PREDICTED: gamma-aminobutyric acid type	0.565	0.113	0.722	4e-58
383856316	1343	PREDICTED: gamma-aminobutyric acid type	0.558	0.107	0.726	4e-58
340717845	1348	PREDICTED: gamma-aminobutyric acid type	0.558	0.106	0.719	5e-58
328780141	1260	PREDICTED: gamma-aminobutyric acid type	0.565	0.115	0.709	5e-58
350421580	1348	PREDICTED: gamma-aminobutyric acid type	0.558	0.106	0.719	5e-58
157126111	1309	gaba-b receptor [Aedes aegypti]	0.565	0.111	0.716	6e-58
170045209	1304	gamma-aminobutyric acid type B receptor	0.565	0.111	0.722	7e-58
347972243	1333	AGAP004595-PA [Anopheles gambiae str. PE	0.565	0.109	0.695	4e-57
403183124	1223	AAEL010408-PA [Aedes aegypti]	0.565	0.119	0.711	7e-57
195055051	1218	GH16266 [Drosophila grimshawi] gi|193892	0.558	0.118	0.719	1e-56

>gi|345491324|ref|XP_003426573.1| PREDICTED: gamma-aminobutyric acid type B receptor subunit 2-like [Nasonia vitripennis]

 Score =  230 bits (587), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 107/148 (72%), Positives = 128/148 (86%), Gaps = 2/148 (1%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +FGAFLAWETRHVSIPALNDSKYVGMSVYNVV+MC+ GAAISFV++DKQDA F+++S+FI
Sbjct: 645 IFGAFLAWETRHVSIPALNDSKYVGMSVYNVVIMCVTGAAISFVLADKQDAMFIMLSVFI 704

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDS--SELEEKLKDAKMS 118
           +FC+TATLCLVFVPK++EL+RNPQG IDKR R TLRPMSK RRDS  SELEE+LKD   +
Sbjct: 705 IFCSTATLCLVFVPKLIELRRNPQGQIDKRFRPTLRPMSKARRDSTVSELEERLKDVTTA 764

Query: 119 NMRHRKILAERENELQALLSRLGSESLA 146
           N + RK L E+E+ELQ  L RLG + +A
Sbjct: 765 NQKFRKQLHEKESELQMYLRRLGDDGVA 792

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856316|ref|XP_003703655.1| PREDICTED: gamma-aminobutyric acid type B receptor subunit 2-like [Megachile rotundata]

 Score =  230 bits (586), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 106/146 (72%), Positives = 132/146 (90%), Gaps = 2/146 (1%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +FGAFLAWETRHVSIPALNDSKYVGMSVYNVV+MC+ GAAISFV++DKQDA F+++++FI
Sbjct: 656 IFGAFLAWETRHVSIPALNDSKYVGMSVYNVVIMCVTGAAISFVLADKQDAMFIMLAVFI 715

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDS--SELEEKLKDAKMS 118
           +FC+TATLCLVFVPK++EL+RNPQG+IDKRIRATLRPMSKTRRDS  SELEE+LK+A ++
Sbjct: 716 IFCSTATLCLVFVPKLIELRRNPQGAIDKRIRATLRPMSKTRRDSSISELEERLKEATLA 775

Query: 119 NMRHRKILAERENELQALLSRLGSES 144
           N + R  L E+++ELQA L RL  ++
Sbjct: 776 NQKFRTQLLEKDSELQAFLRRLDDQA 801

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717845|ref|XP_003397385.1| PREDICTED: gamma-aminobutyric acid type B receptor subunit 2-like [Bombus terrestris]

 Score =  230 bits (586), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 105/146 (71%), Positives = 132/146 (90%), Gaps = 2/146 (1%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +FGAFLAWETRHVSIPALNDSKYVGMSVYNVV+MC+ GAAISFV++DKQDA F+++++FI
Sbjct: 659 IFGAFLAWETRHVSIPALNDSKYVGMSVYNVVIMCVTGAAISFVLADKQDAMFIMLAIFI 718

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDSS--ELEEKLKDAKMS 118
           +FC+TATLCLVFVPK++EL+RNPQG+IDKRIRATLRPMSKTRRDSS  ELEE+LK+A ++
Sbjct: 719 IFCSTATLCLVFVPKLIELRRNPQGAIDKRIRATLRPMSKTRRDSSITELEERLKEATLA 778

Query: 119 NMRHRKILAERENELQALLSRLGSES 144
           N + RK L E+++ELQ  L R+  ++
Sbjct: 779 NQKFRKQLLEKDSELQMFLRRIDDQT 804

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328780141|ref|XP_393623.4| PREDICTED: gamma-aminobutyric acid type B receptor subunit 2 [Apis mellifera]

 Score =  230 bits (586), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 105/148 (70%), Positives = 133/148 (89%), Gaps = 2/148 (1%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +FGAFLAWETRHVSIPALNDSKYVGMSVYNVV+MC+ GAAISFV++DKQDA F+++++FI
Sbjct: 570 IFGAFLAWETRHVSIPALNDSKYVGMSVYNVVIMCVTGAAISFVLADKQDAMFIMLAIFI 629

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDS--SELEEKLKDAKMS 118
           +FC+TATLCLVFVPK++EL+RNPQG+IDKRIRATLRP+SKTRRDS  SELEE+LK+A ++
Sbjct: 630 IFCSTATLCLVFVPKLIELRRNPQGTIDKRIRATLRPVSKTRRDSSVSELEERLKEATLA 689

Query: 119 NMRHRKILAERENELQALLSRLGSESLA 146
           N + RK L E+++ELQ  L RL  ++ +
Sbjct: 690 NQKFRKQLLEKDSELQMFLRRLDDQTTS 717

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350421580|ref|XP_003492891.1| PREDICTED: gamma-aminobutyric acid type B receptor subunit 2-like [Bombus impatiens]

 Score =  230 bits (586), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 105/146 (71%), Positives = 132/146 (90%), Gaps = 2/146 (1%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +FGAFLAWETRHVSIPALNDSKYVGMSVYNVV+MC+ GAAISFV++DKQDA F+++++FI
Sbjct: 659 IFGAFLAWETRHVSIPALNDSKYVGMSVYNVVIMCVTGAAISFVLADKQDAMFIMLAIFI 718

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDS--SELEEKLKDAKMS 118
           +FC+TATLCLVFVPK++EL+RNPQG+IDKRIRATLRPMSKTRRDS  SELEE+LK+A ++
Sbjct: 719 IFCSTATLCLVFVPKLIELRRNPQGAIDKRIRATLRPMSKTRRDSSISELEERLKEATLA 778

Query: 119 NMRHRKILAERENELQALLSRLGSES 144
           N + RK L E+++ELQ  L R+  ++
Sbjct: 779 NQKFRKQLLEKDSELQMFLRRIDDQT 804

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157126111|ref|XP_001654541.1| gaba-b receptor [Aedes aegypti]

 Score =  230 bits (586), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 106/148 (71%), Positives = 130/148 (87%), Gaps = 2/148 (1%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +FGAFLAWETRHVSIPALNDSK+VGMSVYN V+MC+MGAAI+ V+SD++DA F++ISLFI
Sbjct: 683 IFGAFLAWETRHVSIPALNDSKHVGMSVYNCVIMCVMGAAIALVLSDRKDAVFILISLFI 742

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDSS--ELEEKLKDAKMS 118
           +FCTTATLCLVFVPK VELKRNP G +DK++RATLRPMSK RRDSS  ELE++++D K +
Sbjct: 743 IFCTTATLCLVFVPKFVELKRNPTGVVDKKVRATLRPMSKNRRDSSACELEQRMRDVKQT 802

Query: 119 NMRHRKILAERENELQALLSRLGSESLA 146
           N R RK+L E+E ELQAL+ RLG ++ A
Sbjct: 803 NCRFRKVLMEKEAELQALIKRLGPDARA 830

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170045209|ref|XP_001850209.1| gamma-aminobutyric acid type B receptor [Culex quinquefasciatus] gi|167868196|gb|EDS31579.1| gamma-aminobutyric acid type B receptor [Culex quinquefasciatus]

 Score =  229 bits (585), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 107/148 (72%), Positives = 129/148 (87%), Gaps = 2/148 (1%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +FGAFLAWETRHVSIPALNDSK+VGMSVYN V+MC+MGAAI+ V+SD++DA F++ISLFI
Sbjct: 647 IFGAFLAWETRHVSIPALNDSKHVGMSVYNCVIMCVMGAAIALVLSDRKDAVFILISLFI 706

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDSS--ELEEKLKDAKMS 118
           +FCTTATLCLVFVPK VELKRNP G +DK+ RATLRPMSK RRDSS  ELE+++KD K +
Sbjct: 707 IFCTTATLCLVFVPKFVELKRNPSGVVDKKCRATLRPMSKNRRDSSACELEQRMKDVKQT 766

Query: 119 NMRHRKILAERENELQALLSRLGSESLA 146
           N R RK+L E+E ELQAL+ RLG ++ A
Sbjct: 767 NCRFRKVLMEKEAELQALVKRLGPDARA 794

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347972243|ref|XP_557488.3| AGAP004595-PA [Anopheles gambiae str. PEST] gi|333469341|gb|EAL40175.3| AGAP004595-PA [Anopheles gambiae str. PEST]

 Score =  227 bits (578), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 103/148 (69%), Positives = 131/148 (88%), Gaps = 2/148 (1%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +FGAFLAWETRHVSIPALNDSK+VG+SVYN V+MC+MGAAI+ V+SD++DA F++IS+FI
Sbjct: 641 IFGAFLAWETRHVSIPALNDSKHVGLSVYNCVIMCVMGAAIALVLSDRKDAMFILISVFI 700

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDSS--ELEEKLKDAKMS 118
           +FCTTATLCLVFVPK+VELKRNP G +DK++RATLRP+SK RRDSS  ELE++++D K +
Sbjct: 701 IFCTTATLCLVFVPKLVELKRNPSGVVDKKVRATLRPVSKNRRDSSVCELEQRMRDVKQT 760

Query: 119 NMRHRKILAERENELQALLSRLGSESLA 146
           N R RK+L E+E ELQAL+ R+G E+ A
Sbjct: 761 NCRFRKVLMEKEAELQALIKRVGPEARA 788

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|403183124|gb|EAT37610.2| AAEL010408-PA [Aedes aegypti]

 Score =  226 bits (576), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 106/149 (71%), Positives = 131/149 (87%), Gaps = 3/149 (2%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +FGAFLAWETRHVSIPALNDSK+VGMSVYN V+MC+MGAAI+ V+SD++DA F++ISLFI
Sbjct: 635 IFGAFLAWETRHVSIPALNDSKHVGMSVYNCVIMCVMGAAIALVLSDRKDAVFILISLFI 694

Query: 61  LFCTTATLCLVFVPKI-VELKRNPQGSIDKRIRATLRPMSKTRRDSS--ELEEKLKDAKM 117
           +FCTTATLCLVFVPK+ VELKRNP G +DK++RATLRPMSK RRDSS  ELE++++D K 
Sbjct: 695 IFCTTATLCLVFVPKVFVELKRNPTGVVDKKVRATLRPMSKNRRDSSACELEQRMRDVKQ 754

Query: 118 SNMRHRKILAERENELQALLSRLGSESLA 146
           +N R RK+L E+E ELQAL+ RLG ++ A
Sbjct: 755 TNCRFRKVLMEKEAELQALIKRLGPDARA 783

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195055051|ref|XP_001994436.1| GH16266 [Drosophila grimshawi] gi|193892199|gb|EDV91065.1| GH16266 [Drosophila grimshawi]

 Score =  225 bits (574), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 105/146 (71%), Positives = 126/146 (86%), Gaps = 2/146 (1%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +FGAFLAWETRHVSIPALNDSK++G SVYNV + CI GAAIS V+SD++D  FV++S FI
Sbjct: 636 VFGAFLAWETRHVSIPALNDSKHIGFSVYNVFITCIAGAAISLVLSDRKDLVFVLLSFFI 695

Query: 61  LFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKTRRDSS--ELEEKLKDAKMS 118
           +FCTTATLCLVFVPK+VELKRNPQG +DKR+RATLRPMSK RRDSS  ELE++L+D K +
Sbjct: 696 IFCTTATLCLVFVPKLVELKRNPQGVVDKRVRATLRPMSKNRRDSSVCELEQRLRDVKNT 755

Query: 119 NMRHRKILAERENELQALLSRLGSES 144
           N R RK L E+ENELQAL+ +LG E+
Sbjct: 756 NCRFRKALMEKENELQALIRKLGPEA 781

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
FB|FBgn0027575	1221	GABA-B-R2 "metabotropic GABA-B	0.558	0.117	0.707	6.5e-51
UNIPROTKB|I3L6R6	449	GABBR2 "Uncharacterized protei	0.542	0.311	0.452	1.6e-29
UNIPROTKB|I3LET3	172	I3LET3 "Uncharacterized protei	0.593	0.889	0.412	3.4e-29
UNIPROTKB|F1NMD2	782	GABBR2 "Uncharacterized protei	0.542	0.179	0.452	1.7e-28
ZFIN|ZDB-GENE-060503-620	935	gabbr2 "gamma-aminobutyric aci	0.542	0.149	0.459	1.9e-28
UNIPROTKB|F1MIZ5	835	GABBR2 "Uncharacterized protei	0.542	0.167	0.452	1.9e-28
MGI|MGI:2386030	940	Gabbr2 "gamma-aminobutyric aci	0.542	0.148	0.452	2.4e-28
RGD|619864	940	Gabbr2 "gamma-aminobutyric aci	0.542	0.148	0.452	2.4e-28
UNIPROTKB|O75899	941	GABBR2 "Gamma-aminobutyric aci	0.542	0.148	0.452	2.5e-28
UNIPROTKB|E2R738	942	GABBR2 "Uncharacterized protei	0.542	0.148	0.452	2.5e-28

FB|FBgn0027575 GABA-B-R2 "metabotropic GABA-B receptor subtype 2" [Drosophila melanogaster (taxid:7227)]

 Score = 540 (195.1 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 104/147 (70%), Positives = 126/147 (85%)

Query:     1 MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
             +FGAFLAWETRHVSIPALNDSK++G SVYNV + C+ GAAIS V+SD++D  FV++S FI
Sbjct:   635 VFGAFLAWETRHVSIPALNDSKHIGFSVYNVFITCLAGAAISLVLSDRKDLVFVLLSFFI 694

Query:    61 LFCTTATLCLVFVPKIVELKRNPQGSIDKRIRATLRPMSKT-RRDSS--ELEEKLKDAKM 117
             +FCTTATLCLVFVPK+VELKRNPQG +DKR+RATLRPMSK  RRDSS  ELE++L+D K 
Sbjct:   695 IFCTTATLCLVFVPKLVELKRNPQGVVDKRVRATLRPMSKNGRRDSSVCELEQRLRDVKN 754

Query:   118 SNMRHRKILAERENELQALLSRLGSES 144
             +N R RK L E+ENELQAL+ +LG E+
Sbjct:   755 TNCRFRKALMEKENELQALIRKLGPEA 781

GO:0004965 "G-protein coupled GABA receptor activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;ISS

GO:0031631 "negative regulation of synaptic vesicle fusion to presynaptic membrane" evidence=IDA

GO:0042048 "olfactory behavior" evidence=IDA

GO:0046676 "negative regulation of insulin secretion" evidence=IMP

UNIPROTKB|I3L6R6 GABBR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 67/148 (45%), Positives = 99/148 (66%)

Query:     1 MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
             +FG FLAWETR+VSIPALNDSKY+GMSVYNV +MCI+GAA+SF+  D+ +  F I++L I
Sbjct:   177 LFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAVSFLTRDQPNVQFCIVALVI 236

Query:    61 LFCTTATLCLVFVPKIVELKRNPQGSI-DKRIRATLRPM---SKTRRDSSELEE----KL 112
             +FC+T TLCLVFVPK++ L+ NP  +  ++R + T       SKT    + + +    +L
Sbjct:   237 IFCSTITLCLVFVPKLITLRTNPDAATQNRRFQFTQNQKKEDSKTSTSVTSVNQASTSRL 296

Query:   113 KDAKMSNMRHRKILAERENELQALLSRL 140
             +  +  N R R  + E + +L+ +  +L
Sbjct:   297 EGLQSENHRLRMKITELDKDLEEVTMQL 324

GO:0016021 "integral to membrane" evidence=IEA

GO:0004965 "G-protein coupled GABA receptor activity" evidence=IEA

UNIPROTKB|I3LET3 I3LET3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 66/160 (41%), Positives = 100/160 (62%)

Query:     1 MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
             +FG FLAWETR+VSIPALNDSKY+GMSVYNV +MCI+GAA+SF+  D+ +  F I++L I
Sbjct:    17 LFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAVSFLTRDQPNVQFCIVALVI 76

Query:    61 LFCTTATLCLVFVPKIVELKRNPQGSI-DKRIRATLRPMSKTRRDSSELEEKLKDAKMSN 119
             +FC+T TLCLVFVPK++ L+ NP  +  ++R + T       +++ S+    +     ++
Sbjct:    77 IFCSTITLCLVFVPKLITLRTNPDAATQNRRFQFT----QNQKKEDSKTSTSVTSVNQAS 132

Query:   120 MRHRKILAERENELQALLSRLGSESLAL--PSSGPHGKTP 157
                 + L    + L+  ++ +   +L    PSS  H   P
Sbjct:   133 TSRLEGLQSENHRLRMKITEVPPTALVTRAPSSCLHPSAP 172

GO:0016021 "integral to membrane" evidence=IEA

GO:0004965 "G-protein coupled GABA receptor activity" evidence=IEA

UNIPROTKB|F1NMD2 GABBR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 327 (120.2 bits), Expect = 1.7e-28, P = 1.7e-28
 Identities = 67/148 (45%), Positives = 99/148 (66%)

Query:     1 MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
             +FG FLAWETR+VSIPALNDSKY+GMSVYNV +MCI+GAA+SF+  D+ +  F I++L I
Sbjct:   510 LFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAVSFLTRDQPNVQFCIVALVI 569

Query:    61 LFCTTATLCLVFVPKIVELKRNPQGSI-DKRIRATLRPM---SKTRRDSSELEE----KL 112
             +FC+T TLCLVFVPK++ L+ NP  +  ++R + T       SKT    + + +    +L
Sbjct:   570 IFCSTITLCLVFVPKLITLRTNPDAATQNRRFQFTQNQKKEDSKTSTSVTSVNQASTSRL 629

Query:   113 KDAKMSNMRHRKILAERENELQALLSRL 140
             +  +  N R R  + E + +L+ +  +L
Sbjct:   630 EGLQSENHRLRMKITELDKDLEEVTMQL 657

GO:0004965 "G-protein coupled GABA receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

ZFIN|ZDB-GENE-060503-620 gabbr2 "gamma-aminobutyric acid (GABA) B receptor, 2" [Danio rerio (taxid:7955)]

 Score = 328 (120.5 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 68/148 (45%), Positives = 98/148 (66%)

Query:     1 MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
             +FG FLAWETR+VSIPALNDSKY+GMSVYNV +MCI+GAA+SF+  D+ +  F I++L I
Sbjct:   664 LFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAVSFLTRDQPNVQFCIVALVI 723

Query:    61 LFCTTATLCLVFVPKIVELKRNPQGSI-DKRIRATLRPM---SKTRRDSSELEE----KL 112
             +FC+T TLCLVFVPK V ++ NP  +  ++R++ T       SKT    + + +    +L
Sbjct:   724 IFCSTITLCLVFVPKFVTMRTNPDAATQNRRLKFTQNQKKEDSKTSTSVTSVNQANTSRL 783

Query:   113 KDAKMSNMRHRKILAERENELQALLSRL 140
                +  N R R  + E + EL+ +  +L
Sbjct:   784 DGLQSDNHRLRMKITELDKELEEVTMQL 811

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0004965 "G-protein coupled GABA receptor activity" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1MIZ5 GABBR2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 327 (120.2 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 67/148 (45%), Positives = 99/148 (66%)

Query:     1 MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
             +FG FLAWETR+VSIPALNDSKY+GMSVYNV +MCI+GAA+SF+  D+ +  F I++L I
Sbjct:   563 LFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAVSFLTRDQPNVQFCIVALVI 622

Query:    61 LFCTTATLCLVFVPKIVELKRNPQGSI-DKRIRATLRPM---SKTRRDSSELEE----KL 112
             +FC+T TLCLVFVPK++ L+ NP  +  ++R + T       SKT    + + +    +L
Sbjct:   623 IFCSTITLCLVFVPKLITLRTNPDAATQNRRFQFTQNQKKEDSKTSTSVTSVNQASTSRL 682

Query:   113 KDAKMSNMRHRKILAERENELQALLSRL 140
             +  +  N R R  + E + +L+ +  +L
Sbjct:   683 EGLQSENHRLRMKITELDKDLEEVTMQL 710

GO:0043005 "neuron projection" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0004965 "G-protein coupled GABA receptor activity" evidence=IEA

MGI|MGI:2386030 Gabbr2 "gamma-aminobutyric acid (GABA) B receptor, 2" [Mus musculus (taxid:10090)]

 Score = 327 (120.2 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 67/148 (45%), Positives = 99/148 (66%)

Query:     1 MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
             +FG FLAWETR+VSIPALNDSKY+GMSVYNV +MCI+GAA+SF+  D+ +  F I++L I
Sbjct:   668 LFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAVSFLTRDQPNVQFCIVALVI 727

Query:    61 LFCTTATLCLVFVPKIVELKRNPQGSI-DKRIRATLRPM---SKTRRDSSELEE----KL 112
             +FC+T TLCLVFVPK++ L+ NP  +  ++R + T       SKT    + + +    +L
Sbjct:   728 IFCSTITLCLVFVPKLITLRTNPDAATQNRRFQFTQNQKKEDSKTSTSVTSVNQASTSRL 787

Query:   113 KDAKMSNMRHRKILAERENELQALLSRL 140
             +  +  N R R  + E + +L+ +  +L
Sbjct:   788 EGLQSENHRLRMKITELDKDLEEVTMQL 815

GO:0004871 "signal transducer activity" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0004965 "G-protein coupled GABA receptor activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0007214 "gamma-aminobutyric acid signaling pathway" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0043005 "neuron projection" evidence=IDA

GO:0045202 "synapse" evidence=IEA

GO:0045211 "postsynaptic membrane" evidence=IEA

RGD|619864 Gabbr2 "gamma-aminobutyric acid (GABA) B receptor 2" [Rattus norvegicus (taxid:10116)]

 Score = 327 (120.2 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 67/148 (45%), Positives = 99/148 (66%)

Query:     1 MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
             +FG FLAWETR+VSIPALNDSKY+GMSVYNV +MCI+GAA+SF+  D+ +  F I++L I
Sbjct:   668 LFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAVSFLTRDQPNVQFCIVALVI 727

Query:    61 LFCTTATLCLVFVPKIVELKRNPQGSI-DKRIRATLRPM---SKTRRDSSELEE----KL 112
             +FC+T TLCLVFVPK++ L+ NP  +  ++R + T       SKT    + + +    +L
Sbjct:   728 IFCSTITLCLVFVPKLITLRTNPDAATQNRRFQFTQNQKKEDSKTSTSVTSVNQASTSRL 787

Query:   113 KDAKMSNMRHRKILAERENELQALLSRL 140
             +  +  N R R  + E + +L+ +  +L
Sbjct:   788 EGLQSENHRLRMKITELDKDLEEVTMQL 815

GO:0004965 "G-protein coupled GABA receptor activity" evidence=IDA

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA

GO:0007214 "gamma-aminobutyric acid signaling pathway" evidence=IDA

GO:0016021 "integral to membrane" evidence=TAS

GO:0030054 "cell junction" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA;ISO

GO:0045211 "postsynaptic membrane" evidence=IEA

UNIPROTKB|O75899 GABBR2 "Gamma-aminobutyric acid type B receptor subunit 2" [Homo sapiens (taxid:9606)]

 Score = 327 (120.2 bits), Expect = 2.5e-28, P = 2.5e-28
 Identities = 67/148 (45%), Positives = 99/148 (66%)

Query:     1 MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
             +FG FLAWETR+VSIPALNDSKY+GMSVYNV +MCI+GAA+SF+  D+ +  F I++L I
Sbjct:   669 LFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAVSFLTRDQPNVQFCIVALVI 728

Query:    61 LFCTTATLCLVFVPKIVELKRNPQGSI-DKRIRATLRPM---SKTRRDSSELEE----KL 112
             +FC+T TLCLVFVPK++ L+ NP  +  ++R + T       SKT    + + +    +L
Sbjct:   729 IFCSTITLCLVFVPKLITLRTNPDAATQNRRFQFTQNQKKEDSKTSTSVTSVNQASTSRL 788

Query:   113 KDAKMSNMRHRKILAERENELQALLSRL 140
             +  +  N R R  + E + +L+ +  +L
Sbjct:   789 EGLQSENHRLRMKITELDKDLEEVTMQL 816

GO:0030054 "cell junction" evidence=IEA

GO:0004965 "G-protein coupled GABA receptor activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007214 "gamma-aminobutyric acid signaling pathway" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0045211 "postsynaptic membrane" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=TAS

GO:0007194 "negative regulation of adenylate cyclase activity" evidence=TAS

GO:0005886 "plasma membrane" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

UNIPROTKB|E2R738 GABBR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 327 (120.2 bits), Expect = 2.5e-28, P = 2.5e-28
 Identities = 67/148 (45%), Positives = 99/148 (66%)

Query:     1 MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
             +FG FLAWETR+VSIPALNDSKY+GMSVYNV +MCI+GAA+SF+  D+ +  F I++L I
Sbjct:   670 LFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAVSFLTRDQPNVQFCIVALVI 729

Query:    61 LFCTTATLCLVFVPKIVELKRNPQGSI-DKRIRATLRPM---SKTRRDSSELEE----KL 112
             +FC+T TLCLVFVPK++ L+ NP  +  ++R + T       SKT    + + +    +L
Sbjct:   730 IFCSTITLCLVFVPKLITLRTNPDAATQNRRFQFTQNQKKEDSKTSTSVTSVNQASTSRL 789

Query:   113 KDAKMSNMRHRKILAERENELQALLSRL 140
             +  +  N R R  + E + +L+ +  +L
Sbjct:   790 EGLQSENHRLRMKITELDKDLEEVTMQL 817

GO:0043005 "neuron projection" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0004965 "G-protein coupled GABA receptor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	258
pfam00003	238	pfam00003, 7tm_3, 7 transmembrane sweet-taste rece	2e-10

>gnl|CDD|215648 pfam00003, 7tm_3, 7 transmembrane sweet-taste receptor of 3 GCPR

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 1   MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFI 60
           +   FLA++ R +     N++K++  S+Y   ++ I    +    + K      +++  I
Sbjct: 163 LLCFFLAFKARKLP-ENFNEAKFITFSMYLFCIIWIAFIPLYLSTNGK--YRDAVLAFAI 219

Query: 61  LFCTTATLCLVFVPKI 76
           L   T  L  +F+PK 
Sbjct: 220 LASATGLLLCIFIPKC 235

This is a domain of seven transmembrane regions that forms the C-terminus of some subclass 3 G-coupled-protein receptors. It is often associated with a downstream cysteine-rich linker domain, NCD3G pfam07562, which is the human sweet-taste receptor, and the N-terminal domain, ANF_receptor pfam01094. The seven TM regions assemble in such a way as to produce a docking pocket into which such molecules as cyclamate and lactisole have been found to bind and consequently confer the taste of sweetness. Length = 238

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	258
KOG1055|consensus	865		99.95
PF00003	238	7tm_3: 7 transmembrane sweet-taste receptor of 3 G	99.52
KOG1056|consensus	878		99.18
KOG4418|consensus	438		97.24
smart00338	65	BRLZ basic region leucin zipper.	90.09
PF04156	191	IncA: IncA protein; InterPro: IPR007285 Chlamydia	88.87
PF05529	192	Bap31: B-cell receptor-associated protein 31-like	88.83
PRK13729	475	conjugal transfer pilus assembly protein TraB; Pro	88.4
PF00170	64	bZIP_1: bZIP transcription factor cAMP response el	87.89
PF07334	76	IFP_35_N: Interferon-induced 35 kDa protein (IFP 3	85.73
KOG3335|consensus	181		85.32
PHA03155	115	hypothetical protein; Provisional	85.27
PRK10722	247	hypothetical protein; Provisional	84.98
PF06637	442	PV-1: PV-1 protein (PLVAP); InterPro: IPR009538 Th	84.97
PF11544	76	Spc42p: Spindle pole body component Spc42p; InterP	84.88
KOG4571|consensus	294		83.52
PRK00888	105	ftsB cell division protein FtsB; Reviewed	82.66
KOG1924|consensus	1102		82.46
PF06667	75	PspB: Phage shock protein B; InterPro: IPR009554 T	82.25
PF14584	151	DUF4446: Protein of unknown function (DUF4446)	81.97
PRK10884	206	SH3 domain-containing protein; Provisional	81.03

>KOG1055|consensus

Probab=99.95  E-value=2.4e-29  Score=254.36  Aligned_cols=144  Identities=47%  Similarity=0.786  Sum_probs=127.4

Q ss_pred             CeeeEEEEEeeecCCCCCCccchhhhHHHHHHHHHHHHHhhhhhccCCCchHHHHHHHHHHHHHHHHHHHhhhhceeeee
Q psy3590           1 MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCTTATLCLVFVPKIVELK   80 (258)
Q Consensus         1 LfG~FLAweTR~V~i~~fNESK~Ig~SVYnV~VlslI~vPVs~vl~s~pd~~f~lisl~IifcTT~tL~LLFVPKv~~i~   80 (258)
                      +||+||||+||+|+++++|||||||++||||+++|++..|+.+++.+++|+.|++++++|+||+|++||++|+||++.+.
T Consensus       653 vfG~FLA~ETR~V~i~~INDskyiG~svyNVfv~cli~a~V~~v~~sq~da~Fa~~sl~Iifc~t~tl~lifvpKv~~l~  732 (865)
T KOG1055|consen  653 LFGCFLAWETRNVSIPAINDSKYIGMSVYNVFVMCLITAPVTLVLSSQKDAAFAFVSLFIIFCSTITLCLVFVPKLRHLI  732 (865)
T ss_pred             HHhHHhhhhccccchhhhccccccceeeeeeeEEeeecCceeeeeecccccceehhhhHHHhhhhhhhheecchhheeee
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcchhhhhhcccCCCCCCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy3590          81 RNPQGSIDKRIRATLRPMSKTRRDS-SELEEKLKDAKMSNMRHRKILAERENELQALLSRLGSESLALP  148 (258)
Q Consensus        81 ~~P~~~~d~r~r~t~~~~S~t~rss-~~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~~~~kl~  148 (258)
                      ++|+...+.+....    +.++++. ..+||+.+.|+.||+++|+.|+|||++|.+++++|..+.++..
T Consensus       733 t~p~~~se~q~n~~----~~~ss~~~k~~eer~~~lk~EN~~l~~~i~ekee~i~e~~~~l~~~~~~~~  797 (865)
T KOG1055|consen  733 TNPQWASEAQRNMK----TGPSSSVNENEEERLRLLKKENRRLRKKIMEKEERLSELKHQLQPRPRKTI  797 (865)
T ss_pred             cCchhhhhhhhccc----cCcccccchhHHHHhhhhhcccHHHHHhcccchHHHHHHHHhccccccccc
Confidence            99998655543222    2221222 3677799999999999999999999999999999998776543

>PF00003 7tm_3: 7 transmembrane sweet-taste receptor of 3 GCPR; InterPro: IPR017978 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=99.52  E-value=4.5e-15  Score=128.66  Aligned_cols=76  Identities=38%  Similarity=0.751  Sum_probs=70.8

Q ss_pred             CeeeEEEEEeeecCCCCCCccchhhhHHHHHHHHHHHHHhhhhhccCCCchHHHHHHHHHHHHHHHHHHHhhhhceeee
Q psy3590           1 MFGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCTTATLCLVFVPKIVEL   79 (258)
Q Consensus         1 LfG~FLAweTR~V~i~~fNESK~Ig~SVYnV~VlslI~vPVs~vl~s~pd~~f~lisl~IifcTT~tL~LLFVPKv~~i   79 (258)
                      ++|+++||+||+++ +++||||+|++++|++++++++.+|++++.++.  .++.+.++++++|++++++++|+||++.+
T Consensus       163 ~~~~~la~~~R~~~-~~~nEa~~I~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~lF~PKi~~i  238 (238)
T PF00003_consen  163 LIGFFLAFKTRNVP-SNFNEARYIAFAIYNITIIWIIFIPLYFVTDGE--WRFLIISFGILLCATVTLGLLFIPKIYII  238 (238)
T ss_pred             HHHHHHHHhhCCCC-cccchhhhHhHhHHHHHHHHHHhhhheeeccch--HHHHHHHHHHHHHHHHHHHHhhhheEEeC
Confidence            36899999999997 999999999999999999999999998888765  78999999999999999999999999864

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). GPCR family 3 receptors (also known as family C) are structurally similar to other GPCRs, but do not show any significant sequence similarity and thus represent a distinct group. Structurally they are composed of four elements; an N-terminal signal sequence; a large hydrophilic extracellular agonist-binding region containing several conserved cysteine residues which could be involved in disulphide bonds; a shorter region containing seven transmembrane domains; and a C-terminal cytoplasmic domain of variable length []. Family 3 members include the metabotropic glutamate receptors, the extracellular calcium-sensing receptors, the gamma-amino-butyric acid (GABA) type B receptors, and the vomeronasal type-2 receptors [, , , ]. As these receptors regulate many important physiological processes they are potentially promising targets for drug development. This entry represents the C-terminal region of family 3 GPCR receptor proteins, which contains the seven transmembrane region. The seven TM regions assemble in such a way as to produce a docking pocket into which such molecules as cyclamate and lactisole have been found to bind and consequently confer the taste of sweetness []. ; GO: 0004930 G-protein coupled receptor activity, 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane

>KOG1056|consensus

Probab=99.18  E-value=3.2e-12  Score=132.63  Aligned_cols=83  Identities=18%  Similarity=0.386  Sum_probs=73.6

Q ss_pred             eeEEEEEeeecCCCCCCccchhhhHHHHHHHHHHHHHhhhhhccCCCchHHHHHHHHHHHHHHHHHHHhhhhceeeeecC
Q psy3590           3 GAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCTTATLCLVFVPKIVELKRN   82 (258)
Q Consensus         3 G~FLAweTR~V~i~~fNESK~Ig~SVYnV~VlslI~vPVs~vl~s~pd~~f~lisl~IifcTT~tL~LLFVPKv~~i~~~   82 (258)
                      +++.|++||++ +++|||+|+|+|++|..+++|+.++|+++++.+.  .+-+...+.+.+|.++.|+++|+||+|.++++
T Consensus       735 Ct~yA~ktR~~-peNFNEaK~I~Ftmy~t~iiWlAfipi~~~t~~~--~~~a~~~is~~lSasv~Lg~lf~PK~yIIl~~  811 (878)
T KOG1056|consen  735 CTVYAFKTRNL-PENFNEAKFIGFTMYTTCIIWLAFIPIYFGTDHK--IQDATLCISLSLSASVALGCLFIPKVYIILFH  811 (878)
T ss_pred             HHHHHhhccCC-hhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCcc--eeeeehehhhHhhhhhhheeEecCcEEEEEec
Confidence            56789999999 5999999999999999999999999999999872  33345567789999999999999999999999


Q ss_pred             CCCcch
Q psy3590          83 PQGSID   88 (258)
Q Consensus        83 P~~~~d   88 (258)
                      |+.|..
T Consensus       812 pe~Nv~  817 (878)
T KOG1056|consen  812 PERNVI  817 (878)
T ss_pred             CccchH
Confidence            998754

>KOG4418|consensus

Probab=97.24  E-value=0.00053  Score=67.01  Aligned_cols=79  Identities=19%  Similarity=0.141  Sum_probs=62.9

Q ss_pred             eeeEEEEEeeecCCCCCCccchhhhHHHHHHHHHHHHHh--hhhhccCCCchHHHHHHHHHHHHHHHHHHHhhhhceeee
Q psy3590           2 FGAFLAWETRHVSIPALNDSKYVGMSVYNVVLMCIMGAA--ISFVISDKQDASFVIISLFILFCTTATLCLVFVPKIVEL   79 (258)
Q Consensus         2 fG~FLAweTR~V~i~~fNESK~Ig~SVYnV~VlslI~vP--Vs~vl~s~pd~~f~lisl~IifcTT~tL~LLFVPKv~~i   79 (258)
                      +|+=+++..|+. ...+||||.|+.++||.+....+...  |...-++.||..|++.++.+.+.++.+++++|.||+.+.
T Consensus       114 wG~rvsimrR~a-es~ynesR~cS~aiyn~al~~~a~~v~hv~l~ppa~pdyly~~~fl~tql~~t~t~as~fd~ki~rt  192 (438)
T KOG4418|consen  114 WGFRVSIMRRIA-ESFYNESRNCSGAIYNNALEYRARKVQHVSLRPPAMPDYLYAMLFLTTQLLMTWTVASWFDTKIWRT  192 (438)
T ss_pred             cCcceEEEEecc-cccchhhhhccHhhHhHHHHHHhhheeeEEecCCCCccHHHHHHHHHHHHHHHHhHHhhcccccchh
Confidence            355556666665 58899999999999999988554443  223346789999999999999999999999999999876


Q ss_pred             ec
Q psy3590          80 KR   81 (258)
Q Consensus        80 ~~   81 (258)
                      -.
T Consensus       193 ~~  194 (438)
T KOG4418|consen  193 AW  194 (438)
T ss_pred             cc
Confidence            54

>smart00338 BRLZ basic region leucin zipper

Probab=90.09  E-value=0.96  Score=32.85  Aligned_cols=36  Identities=33%  Similarity=0.413  Sum_probs=32.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3590         106 SELEEKLKDAKMSNMRHRKILAERENELQALLSRLG  141 (258)
Q Consensus       106 ~~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~  141 (258)
                      ...+.+...|..+|..|+.++..+..++..|+.++.
T Consensus        29 ~~Le~~~~~L~~en~~L~~~~~~l~~e~~~lk~~~~   64 (65)
T smart00338       29 EELERKVEQLEAENERLKKEIERLRRELEKLKSELE   64 (65)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            488999999999999999999999999999998764

>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion

Probab=88.87  E-value=4.8  Score=34.44  Aligned_cols=34  Identities=26%  Similarity=0.340  Sum_probs=17.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3590         107 ELEEKLKDAKMSNMRHRKILAERENELQALLSRL  140 (258)
Q Consensus       107 ~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL  140 (258)
                      +.++++..+..|...+++.+.++..+++.++...
T Consensus        85 ~~~~~l~~l~~el~~l~~~~~~~~~~l~~~~~~~  118 (191)
T PF04156_consen   85 ELQQQLQQLQEELDQLQERIQELESELEKLKEDL  118 (191)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4444455555555555555555555555444333

The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].

>PF05529 Bap31: B-cell receptor-associated protein 31-like ; InterPro: IPR008417 Bap31 is a polytopic integral protein of the endoplasmic reticulum membrane and a substrate of caspase-8

Probab=88.83  E-value=0.26  Score=42.78  Aligned_cols=37  Identities=24%  Similarity=0.256  Sum_probs=31.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy3590         108 LEEKLKDAKMSNMRHRKILAERENELQALLSRLGSES  144 (258)
Q Consensus       108 ~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~~~  144 (258)
                      .+++..+++.|.+.++++|++++++++.|++|..+-.
T Consensus       152 ~~~~~~~~~~ei~~lk~el~~~~~~~~~LkkQ~~~l~  188 (192)
T PF05529_consen  152 LKEENKKLSEEIEKLKKELEKKEKEIEALKKQSEGLQ  188 (192)
T ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4566677899999999999999999999999987743

Bap31 is cleaved within its cytosolic domain, generating pro-apoptotic p20 Bap31 [].; GO: 0006886 intracellular protein transport, 0005783 endoplasmic reticulum, 0016021 integral to membrane

>PRK13729 conjugal transfer pilus assembly protein TraB; Provisional

Probab=88.40  E-value=2.7  Score=42.45  Aligned_cols=42  Identities=5%  Similarity=0.086  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy3590         107 ELEEKLKDAKMSN-------MRHRKILAERENELQALLSRLGSESLALP  148 (258)
Q Consensus       107 ~~eEri~~L~~EN-------~~Lkk~I~Eke~eIe~L~~qL~~~~~kl~  148 (258)
                      +.|.++..|+.|.       ..++++|.+++++++.|+.|+...+.+.-
T Consensus        80 ELEKqLaaLrqElq~~saq~~dle~KIkeLEaE~~~Lk~Ql~a~~~~~~  128 (475)
T PRK13729         80 QMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPV  128 (475)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence            6677777766554       46777788888999999999865455433

>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization

Probab=87.89  E-value=1.9  Score=31.29  Aligned_cols=35  Identities=34%  Similarity=0.415  Sum_probs=31.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3590         106 SELEEKLKDAKMSNMRHRKILAERENELQALLSRL  140 (258)
Q Consensus       106 ~~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL  140 (258)
                      ...++++..|+.+|..|+.++..+..+++.|+.++
T Consensus        29 ~~Le~~~~~L~~en~~L~~~~~~L~~~~~~L~~e~   63 (64)
T PF00170_consen   29 EELEEKVEELESENEELKKELEQLKKEIQSLKSEN   63 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            37889999999999999999999999999998764

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2H7H_B 2OQQ_B 1S9K_E 1JNM_A 1JUN_A 1FOS_H 1A02_J 1T2K_C 1CI6_A 1DH3_C ....

>PF07334 IFP_35_N: Interferon-induced 35 kDa protein (IFP 35) N-terminus; InterPro: IPR009938 This entry represents the N terminus of interferon-induced 35 kDa protein (IFP 35) (approximately 80 residues long), which contains a leucine zipper motif in an alpha helical configuration []

Probab=85.73  E-value=1.5  Score=34.22  Aligned_cols=28  Identities=21%  Similarity=0.266  Sum_probs=24.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3590         112 LKDAKMSNMRHRKILAERENELQALLSR  139 (258)
Q Consensus       112 i~~L~~EN~~Lkk~I~Eke~eIe~L~~q  139 (258)
                      +..+..||.+|+++|++++++++.+++.
T Consensus         2 i~ei~eEn~~Lk~eiqkle~ELq~~~~~   29 (76)
T PF07334_consen    2 IHEIQEENARLKEEIQKLEAELQQNKRE   29 (76)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4568899999999999999999998876

This group of proteins also includes N-myc-interactor (Nmi), a homologous interferon-induced protein.

>KOG3335|consensus

Probab=85.32  E-value=2.6  Score=37.64  Aligned_cols=57  Identities=21%  Similarity=0.181  Sum_probs=34.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3590         116 KMSNMRHRKILAERENELQALLSRLGSESLALPSSGPHGKTPPGQPPGKSLPSALKP  172 (258)
Q Consensus       116 ~~EN~~Lkk~I~Eke~eIe~L~~qL~~~~~kl~~~~~~~~~~~~~~~~~~~~~~~~~  172 (258)
                      +.|..+|+.++.+++.+|+++++.+++--+++-.-..-.++...++|..|-.-..||
T Consensus       105 ~~e~~elr~~~~~l~~~i~~~~~~~~~L~~~l~~~~~el~~~~q~~p~~~~sa~~kp  161 (181)
T KOG3335|consen  105 KQEIMELRLKVEKLENAIAELTKFFSQLHSKLNKPESELKPIRQAPPNPGPSAENKP  161 (181)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccccCCCCCCchhhcCC
Confidence            566777888888888888888887777554433222344455555555544333443

>PHA03155 hypothetical protein; Provisional

Probab=85.27  E-value=2.4  Score=35.38  Aligned_cols=38  Identities=26%  Similarity=0.449  Sum_probs=32.4

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHhhh
Q psy3590         105 SSELEEKLKDAKMSNMRHRKILA-------------ERENELQALLSRLGS  142 (258)
Q Consensus       105 s~~~eEri~~L~~EN~~Lkk~I~-------------Eke~eIe~L~~qL~~  142 (258)
                      +.+.+.++.+|+-||..||+++.             +||+.|.....+|.+
T Consensus        10 vEeLaaeL~kL~~ENK~LKkkl~~~~~p~d~~LT~~qKea~I~s~v~~Lt~   60 (115)
T PHA03155         10 VEELEKELQKLKIENKALKKKLLQHGNPEDELLTPAQKDAIINSLVNKLTK   60 (115)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCCCccccCHHHHHHHHHHHHHHHHH
Confidence            45899999999999999999994             588888888777755

>PRK10722 hypothetical protein; Provisional

Probab=84.98  E-value=4.6  Score=37.75  Aligned_cols=37  Identities=19%  Similarity=0.225  Sum_probs=21.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhhccc
Q psy3590         109 EEKLKDAKMSNMRHRKILAERENELQAL---LSRLGSESL  145 (258)
Q Consensus       109 eEri~~L~~EN~~Lkk~I~Eke~eIe~L---~~qL~~~~~  145 (258)
                      +.++..|.+++..++.++.....++|.|   ++||+++|.
T Consensus       175 D~qlD~lrqq~~~Lq~~L~~t~rKLEnLTdIERqLSsRk~  214 (247)
T PRK10722        175 DSELDALRQQQQRLQYQLELTTRKLENLTDIERQLSSRKQ  214 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            4455556666666666666655555544   366666665

>PF06637 PV-1: PV-1 protein (PLVAP); InterPro: IPR009538 This family consists of several PV-1 (PLVAP) proteins, which seem to be specific to mammals

Probab=84.97  E-value=1.4  Score=43.66  Aligned_cols=38  Identities=29%  Similarity=0.318  Sum_probs=30.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy3590         107 ELEEKLKDAKMSNMRHRKILAERENELQALLSRLGSESL  145 (258)
Q Consensus       107 ~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~~~~  145 (258)
                      ..||+ ..|+.|...|.+++.||..|++-+++++.-...
T Consensus       347 aLEEK-aaLrkerd~L~keLeekkreleql~~q~~v~~s  384 (442)
T PF06637_consen  347 ALEEK-AALRKERDSLAKELEEKKRELEQLKMQLAVKTS  384 (442)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            34444 567888889999999999999999999976444

PV-1 is a novel protein component of the endothelial fenestral and stomatal diaphragms []. The function of this family is unknown.

>PF11544 Spc42p: Spindle pole body component Spc42p; InterPro: IPR021611 Spc42p is a 42kDa component of the S

Probab=84.88  E-value=0.79  Score=35.75  Aligned_cols=34  Identities=24%  Similarity=0.248  Sum_probs=23.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCC
Q psy3590         114 DAKMSNMRHRKILAERENELQALLSRLGSESLAL  147 (258)
Q Consensus       114 ~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~~~~kl  147 (258)
                      .|..+|++|++.|..|+.||+.|...+++-..||
T Consensus         2 ~Li~qNk~L~~kL~~K~eEI~rLn~lv~sLR~KL   35 (76)
T PF11544_consen    2 ELIKQNKELKKKLNDKQEEIDRLNILVGSLRGKL   35 (76)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4677888999999999999888887776644443

cerevisiae spindle body that localises to the electron dense central region of the SPB. Spc42p is a phosphoprotein which forms a polymeric layer at the periphery of the SPB central plaque. This functions during SPB duplication and also facilitates the attachment of the SPB to the nuclear membrane. ; PDB: 2Q6Q_B.

>KOG4571|consensus

Probab=83.52  E-value=2.2  Score=40.70  Aligned_cols=36  Identities=19%  Similarity=0.153  Sum_probs=32.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy3590         107 ELEEKLKDAKMSNMRHRKILAERENELQALLSRLGS  142 (258)
Q Consensus       107 ~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~  142 (258)
                      ..+.++..|+.+|++||.+..++++||+.|++-+.+
T Consensus       252 ~l~ge~~~Le~rN~~LK~qa~~lerEI~ylKqli~e  287 (294)
T KOG4571|consen  252 ALLGELEGLEKRNEELKDQASELEREIRYLKQLILE  287 (294)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            566778889999999999999999999999988765

>PRK00888 ftsB cell division protein FtsB; Reviewed

Probab=82.66  E-value=6.9  Score=31.59  Aligned_cols=30  Identities=10%  Similarity=0.163  Sum_probs=13.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3590         108 LEEKLKDAKMSNMRHRKILAERENELQALL  137 (258)
Q Consensus       108 ~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~  137 (258)
                      .++++..++.||.+++++-+++.++|+.|+
T Consensus        32 l~~q~~~~~~e~~~l~~~n~~L~~eI~~L~   61 (105)
T PRK00888         32 VNDQVAAQQQTNAKLKARNDQLFAEIDDLK   61 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            344444444444444444444444444443

>KOG1924|consensus

Probab=82.46  E-value=3.4  Score=44.52  Aligned_cols=24  Identities=13%  Similarity=0.166  Sum_probs=11.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Q psy3590         114 DAKMSNMRHRKILAERENELQALL  137 (258)
Q Consensus       114 ~L~~EN~~Lkk~I~Eke~eIe~L~  137 (258)
                      +....-++.+.+++++++.|..|+
T Consensus       485 ke~ta~qe~qael~k~e~Ki~~l~  508 (1102)
T KOG1924|consen  485 KELTARQEAQAELQKHEEKIKLLE  508 (1102)
T ss_pred             HHHhHHHHHHHHHHHhhhhcccCc
Confidence            333334444444455555555444

>PF06667 PspB: Phage shock protein B; InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences

Probab=82.25  E-value=2.8  Score=32.48  Aligned_cols=28  Identities=21%  Similarity=0.203  Sum_probs=21.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3590         106 SELEEKLKDAKMSNMRHRKILAERENEL  133 (258)
Q Consensus       106 ~~~eEri~~L~~EN~~Lkk~I~Eke~eI  133 (258)
                      .++++++.+|..++++|+++|..+|.-+
T Consensus        38 ~~d~~~L~~L~~~a~rm~eRI~tLE~IL   65 (75)
T PF06667_consen   38 EEDEQRLQELYEQAERMEERIETLERIL   65 (75)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4778888999998888888877766554

The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock

>PF14584 DUF4446: Protein of unknown function (DUF4446)

Probab=81.97  E-value=6.8  Score=33.76  Aligned_cols=39  Identities=21%  Similarity=0.175  Sum_probs=32.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy3590         107 ELEEKLKDAKMSNMRHRKILAERENELQALLSRLGSESL  145 (258)
Q Consensus       107 ~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~~~~  145 (258)
                      ..|+.+.+...+++++++++.+.+++++.++.++.....
T Consensus        43 ~lE~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~   81 (151)
T PF14584_consen   43 NLEDLLNELFDQIDELKEELEELEKRIEELEEKLRNCVQ   81 (151)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            568888888889999999999999999999988876433

>PRK10884 SH3 domain-containing protein; Provisional

Probab=81.03  E-value=3.2  Score=37.37  Aligned_cols=35  Identities=14%  Similarity=0.176  Sum_probs=25.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy3590         110 EKLKDAKMSNMRHRKILAERENELQALLSRLGSES  144 (258)
Q Consensus       110 Eri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~~~  144 (258)
                      .++.+|+.||++|++++++..++++.++.++...+
T Consensus       132 ~~~~~L~~~n~~L~~~l~~~~~~~~~l~~~~~~~~  166 (206)
T PRK10884        132 SVINGLKEENQKLKNQLIVAQKKVDAANLQLDDKQ  166 (206)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445788888888888888888888877776644

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	258
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.8 bits (92), Expect = 8e-04
 Identities = 44/252 (17%), Positives = 77/252 (30%), Gaps = 84/252 (33%)

Query: 20  DSKYVGMSVYNVVLMCIMGAAISFVISDKQDASFVIISLFILFCTT-ATLCLVFVPKIVE 78
           D K V     ++    +    I  +I  K   S  +  LF    +    +   FV ++  
Sbjct: 34  DCKDVQDMPKSI----LSKEEIDHIIMSKDAVSGTLR-LFWTLLSKQEEMVQKFVEEV-- 86

Query: 79  LKRNPQGSIDKRIRATLR-PMSKTRRDSSELEEKLKD----AKMSNMRHRKILAERENEL 133
           L+ N    +   I+   R P   TR    + +    D    AK +  R +  L     +L
Sbjct: 87  LRIN-YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL-----KL 140

Query: 134 QALLSRLGSES-LALPSSGPHGKTPPGQPPGKSLPSALKPPQPEALTVVKRELLVPNNHG 192
           +  L  L     + +      G    G   GK+    +      AL V         ++ 
Sbjct: 141 RQALLELRPAKNVLI-----DGV--LGS--GKT---WV------ALDVC-------LSYK 175

Query: 193 ILSEDPFY-YW----------------KALCHALK----------------------HLK 213
           +  +  F  +W                + L + +                        L+
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235

Query: 214 RLLQSQHYEMML 225
           RLL+S+ YE  L
Sbjct: 236 RLLKSKPYENCL 247

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	258
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	95.41
1t6f_A	37	Geminin; coiled-coil, cell cycle; 1.47A {Synthetic	95.05
2yy0_A	53	C-MYC-binding protein; conserved hypothetical prot	93.86
3ra3_B	28	P2F; coiled coil domain, fiber, KIH interactions,	93.59
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	91.92
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	91.66
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	91.62
3nmd_A	72	CGMP dependent protein kinase; leucine zipper, coi	91.04
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	88.96
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	88.74
1kd8_B	36	GABH BLL, GCN4 acid base heterodimer base-D12LA16L	83.74
2oa5_A	110	Hypothetical protein BQLF2; MHR28B, NESG, structur	82.97
1wlq_A	83	Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2z	81.01
2aze_A	155	Transcription factor DP-1; coiled coil, beta sandw	80.8
4emc_A	190	Monopolin complex subunit CSM1; RWD domain, kineto	80.68
2wq1_A	33	General control protein GCN4; TAA, nucleus, coiled	80.49

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1

Probab=95.41  E-value=0.026  Score=43.51  Aligned_cols=46  Identities=22%  Similarity=0.192  Sum_probs=33.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q psy3590         107 ELEEKLKDAKMSNMRHRKILAERENELQALLSRLGSESLALPSSGP  152 (258)
Q Consensus       107 ~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~~~~kl~~~~~  152 (258)
                      +.+.+...|+.||..|+.+|.++..|+..|+..|.+--..++.+.|
T Consensus        40 e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~~~p~~~~~~~~   85 (87)
T 1hjb_A           40 ETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASSG   85 (87)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHHHhcccc
Confidence            7778888999999999999999999999999999885555554433

>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1

Probab=95.05  E-value=0.039  Score=36.42  Aligned_cols=29  Identities=24%  Similarity=0.302  Sum_probs=25.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3590         112 LKDAKMSNMRHRKILAERENELQALLSRL  140 (258)
Q Consensus       112 i~~L~~EN~~Lkk~I~Eke~eIe~L~~qL  140 (258)
                      +++..+||+.|.+.|.+|+++|.+|+++=
T Consensus         2 L~~~L~ENekLhk~ie~KdeeIa~Lk~eN   30 (37)
T 1t6f_A            2 LYEALKENEKLHKEIEQKDNEIARLKKEN   30 (37)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            45678999999999999999999999753

>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}

Probab=93.86  E-value=0.11  Score=36.46  Aligned_cols=33  Identities=9%  Similarity=0.114  Sum_probs=29.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy3590         110 EKLKDAKMSNMRHRKILAERENELQALLSRLGS  142 (258)
Q Consensus       110 Eri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~  142 (258)
                      .....|+.||.+||+++.++.+++++|+.+|.+
T Consensus        19 ~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~   51 (53)
T 2yy0_A           19 PEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ   51 (53)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            345569999999999999999999999999874

>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}

Probab=93.59  E-value=0.052  Score=33.37  Aligned_cols=28  Identities=32%  Similarity=0.383  Sum_probs=23.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3590         111 KLKDAKMSNMRHRKILAERENELQALLS  138 (258)
Q Consensus       111 ri~~L~~EN~~Lkk~I~Eke~eIe~L~~  138 (258)
                      ++.+|++.|.+||++|+.+|-||..|++
T Consensus         1 kirrlkqknarlkqeiaaleyeiaaleq   28 (28)
T 3ra3_B            1 KIRRLKQKNARLKQEIAALEYEIAALEQ   28 (28)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             ChhHHHHhhhHHHHHHHHHHHHHHHhcC
Confidence            3567999999999999999999988753

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1

Probab=91.92  E-value=0.35  Score=34.68  Aligned_cols=36  Identities=17%  Similarity=0.139  Sum_probs=32.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3590         106 SELEEKLKDAKMSNMRHRKILAERENELQALLSRLG  141 (258)
Q Consensus       106 ~~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~  141 (258)
                      ...+.+..+|+.+|..|+.+|..+..|+..|++.|.
T Consensus        26 ~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll~   61 (63)
T 1ci6_A           26 EALTGECKELEKKNEALKERADSLAKEIQYLKDLIE   61 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            378888899999999999999999999999988764

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A

Probab=91.66  E-value=0.26  Score=37.21  Aligned_cols=36  Identities=22%  Similarity=0.255  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy3590         107 ELEEKLKDAKMSNMRHRKILAERENELQALLSRLGS  142 (258)
Q Consensus       107 ~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~  142 (258)
                      +.+++...|+.||..|+.+|.++..|+..|+..|.+
T Consensus        40 e~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr~ll~q   75 (78)
T 1gu4_A           40 ETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQ   75 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            777888899999999999999999999999987653

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1

Probab=91.62  E-value=0.4  Score=33.86  Aligned_cols=36  Identities=25%  Similarity=0.163  Sum_probs=32.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3590         106 SELEEKLKDAKMSNMRHRKILAERENELQALLSRLG  141 (258)
Q Consensus       106 ~~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~  141 (258)
                      ...+++...|+.+|..|+.+|..+..++..|++.|.
T Consensus        25 ~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~ll   60 (61)
T 1t2k_D           25 QSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLLL   60 (61)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            377888899999999999999999999999998773

>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}

Probab=91.04  E-value=0.41  Score=35.88  Aligned_cols=39  Identities=18%  Similarity=0.115  Sum_probs=31.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy3590         107 ELEEKLKDAKMSNMRHRKILAERENELQALLSRLGSESL  145 (258)
Q Consensus       107 ~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~~~~  145 (258)
                      .-.|++...+...+++.++|.|||++|..|+.+|..-+.
T Consensus        30 ~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfrS   68 (72)
T 3nmd_A           30 EKIEELRQRDALIDELELELDQKDELIQMLQNELDKYRS   68 (72)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            345556667778899999999999999999999976543

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D

Probab=88.96  E-value=0.92  Score=32.31  Aligned_cols=36  Identities=14%  Similarity=0.054  Sum_probs=31.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3590         106 SELEEKLKDAKMSNMRHRKILAERENELQALLSRLG  141 (258)
Q Consensus       106 ~~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~  141 (258)
                      .+.+++...|+.+|..|+.+|..+..++..|+..|.
T Consensus        26 ~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l~   61 (63)
T 2wt7_A           26 DTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILA   61 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            377888899999999999999999999999988764

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A

Probab=88.74  E-value=0.37  Score=34.19  Aligned_cols=36  Identities=22%  Similarity=0.224  Sum_probs=27.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3590         106 SELEEKLKDAKMSNMRHRKILAERENELQALLSRLG  141 (258)
Q Consensus       106 ~~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~  141 (258)
                      .+.+++...|+.+|..|+.+|..+..++..|++.|.
T Consensus        25 ~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk~~l~   60 (62)
T 1jnm_A           25 ARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVM   60 (62)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            377888888999999999999888888888877664

>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B

Probab=83.74  E-value=1.6  Score=28.64  Aligned_cols=35  Identities=17%  Similarity=0.110  Sum_probs=27.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy3590         110 EKLKDAKMSNMRHRKILAERENELQALLSRLGSES  144 (258)
Q Consensus       110 Eri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~~~  144 (258)
                      +|+.+|+...++|..+-.+++.++++|+..+++-+
T Consensus         1 eRMnQLE~KVEeLl~~~~~Le~eV~RLk~ll~~~~   35 (36)
T 1kd8_B            1 XKVKQLKAKVEELKSKLWHLKNKVARLKKKNAECK   35 (36)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            35667888888888888888999999998887643

>2oa5_A Hypothetical protein BQLF2; MHR28B, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: PE5; 2.10A {Murid herpesvirus 4} SCOP: d.362.1.1 PDB: 2h3r_A*

Probab=82.97  E-value=1.1  Score=36.10  Aligned_cols=38  Identities=18%  Similarity=0.295  Sum_probs=31.7

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHhhh
Q psy3590         105 SSELEEKLKDAKMSNMRHRKILA---------------ERENELQALLSRLGS  142 (258)
Q Consensus       105 s~~~eEri~~L~~EN~~Lkk~I~---------------Eke~eIe~L~~qL~~  142 (258)
                      +.+...++.+|+-||..||++|.               +||+.|...-.+|.+
T Consensus        10 ~EeLaaeL~kLqmENK~LKkkl~~~g~~~p~d~~LTp~qKea~I~s~~~~Lss   62 (110)
T 2oa5_A           10 YEEMVKEVERLKLENKTLKQKVKSSGAVSSDDSILTAAKRESIIVSSSRALGA   62 (110)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTC---------CCBCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccCCHHHHHHHHHHHHHHHHH
Confidence            45899999999999999999998               488888887777755

>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*

Probab=81.01  E-value=2.4  Score=32.55  Aligned_cols=31  Identities=19%  Similarity=0.244  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy3590         112 LKDAKMSNMRHRKILAERENELQALLSRLGS  142 (258)
Q Consensus       112 i~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~  142 (258)
                      +.+...||+.|.++|.+|+++|..|++....
T Consensus        33 L~eaL~EN~~Lh~~ie~~~eEi~~Lk~en~~   63 (83)
T 1wlq_A           33 LYEALKENEKLHKEIEQKDSEIARLRKENKD   63 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4668899999999999999999999977654

>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1

Probab=80.80  E-value=2  Score=36.28  Aligned_cols=33  Identities=12%  Similarity=0.264  Sum_probs=29.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3590         109 EEKLKDAKMSNMRHRKILAERENELQALLSRLG  141 (258)
Q Consensus       109 eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~  141 (258)
                      .+++.+|+.|+...+.+|++|.+++++|..|..
T Consensus         4 ~qe~~~Le~Ek~~~~~rI~~K~~~LqeL~~Q~v   36 (155)
T 2aze_A            4 AQECQNLEVERQRRLERIKQKQSQLQELILQQI   36 (155)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            567888999999999999999999999998763

>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A

Probab=80.68  E-value=1.8  Score=37.71  Aligned_cols=36  Identities=14%  Similarity=0.183  Sum_probs=27.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy3590         107 ELEEKLKDAKMSNMRHRKILAERENELQALLSRLGS  142 (258)
Q Consensus       107 ~~eEri~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~  142 (258)
                      ..+..+.+|..||..|..++..++.||+.|++||.+
T Consensus        17 ~ad~LV~~L~~En~~L~~ql~~k~~ei~~L~~ql~s   52 (190)
T 4emc_A           17 SADLLVANLVNENFVLSEKLDTKATEIKQLQKQIDS   52 (190)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334556778999999999999999999998888754

>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...

Probab=80.49  E-value=2.6  Score=27.15  Aligned_cols=31  Identities=13%  Similarity=0.125  Sum_probs=23.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy3590         112 LKDAKMSNMRHRKILAERENELQALLSRLGS  142 (258)
Q Consensus       112 i~~L~~EN~~Lkk~I~Eke~eIe~L~~qL~~  142 (258)
                      +.+|+...+++-.+..+++.|+.+|++-|++
T Consensus         2 MnQLEdKVEell~~~~~le~EV~Rl~~ll~~   32 (33)
T 2wq1_A            2 MKQLEDKIEENTSKIYHNTNEIARNTKLVGE   32 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             chHHHHHHHHHHHhhHHHHHHHHHHHHHhcC
Confidence            4556666667777778888888888888765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00