Psyllid ID: psy359

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-----
Protein Sequence
MKPKETTSIKCEACHRTFSSPYEYGGHKLKCNLFLVQTTDDSYIVPAISQQSESTLKTKTRTSADDLETLEISNTPTSAANVENKTLPLTYPCAKTKTRTSADDLETLEISNTPTSAANVENKTLPLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDKG
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccEccccHHHHHccccccccccccccccccccEccccHHHHHcccccccccccccccccEEccccHcHEcEEEcccccccccccccccccccccEcccccHHHHcHccccccccccccccccEccccHHHHHEEEccccccccccccccccHHcHHHHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccccccccccEccccHHHHHHHHcccccEEcccccccccccccccEccccHHHHHHHHcccccccEEcccccccHHcccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHcccccEccccccEcccHHHHHHHHcHHcccccccccccc
Coil and Loop (DISEMBL)
mkpkettsikceachrtfsspyeygghklkcNLFLVqttddsyivpaisqqsestlktktrtsaddletleisntptsaanvenktlpltypcaktktrtsaddletleisntptsaanvenktlpltypcdqcdrtyqtkkSLYVHRRAHLGIVYryksktdrcelCDKVVTNLAAHhnevhaherkfpctfceksfkrkLHLKVHTrthtgekpyacylcDKRFAQISDRIKHLksshnfdfesvknkttpltRYLNKhlhdahpeAIKTERERKLIFKcdlcgnilsskHILQEHVRVVHMGlsrkyhyeykpdgvcdvCGEYKKQLLQHkrlhfplrpyactqcdktfkkknhltthyrihtgekpyqcdicgrgfaqsndmkkhRRTVHKAQIHAVEDKG
Flexible Loop (DISEMBL)
mkpkettsikceachrtfsspyeyggHKLKCNLFLVQTTDDSYIVPaisqqsestlktktrtsaddletleisntptsaanvenktlpltypcaktktrtsaddletleisntptsaanvenktlpltypcdqCDRTYqtkkslyvhrrAHLGIvyryksktdRCELCDKVVTNLAAHhnevhaherkfpCTFCEKSFKRKLHLKVhtrthtgekpyacyLCDKRFAQISDRIKHLksshnfdfesvknkttPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHyrihtgekpyqcdICGRGFAQSNDMKKHRRTVHkaqihavedkg
Low Complexity Region (SEG)
MKPKETTSIKCEACHRTFSSPYEYGGHKLKCNLFLVQTTDDSYIVPAISQQSESTLKTKTRTSADDLETLEISNTPTSAANVENKTLPLTYPCAKTKTRTSADDLETLEISNTPTSAANVENKTLPLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDKG
Disordered region (IsUnstruct)
********IKCEACHRTFSSPYEYGGHKLKCNLFLVQTTDDSYIVPAI**************************************************************************KTLPLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFA************************
Disordered Region (DISOPRED)
**PKETTSIKCEACHRTFSSPYEYGGHKLKCNLFLVQTTDDSYIVPAISQQSESTLKTKTRTSADDLETLEISNTPTSAANVENKTLPLTYPCAKTKTRTSADDLETLEISNTPTSAANVENKTLPLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDKG
Disordered Region (DISEMBL)
********IKCEACHRTFSSPYEYGGHKLKCNLFLVQTTDDSYIVPAISQQSESTLKTKTRTSADDLETLEISNTPTSAANVENKTLPLTYPCAKTKTRTSADDLETLEISNTPTSAANVENKTLPLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSN***********AQIHAVEDKG
Disordered Region (DISPRO)
*****TTSIKCEACHRTFSSPYEYGGHKLKCNLFLVQTTDDSYIVPAISQQSESTLKTKTRTSADDLETLEISNTPTSAANVENKTLPLTYPCAKTKTRTSADDLETLEISNTPTSAANVENKTLPLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAV**K*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKPKETTSIKCEACHRTFSSPYEYGGHKLKCNLFLVQTTDDSYIVPAISQQSESTLKTKTRTSADDLETLEISNTPTSAANVENKTLPLTYPCAKTKTRTSADDLETLEISNTPTSAANVENKTLPLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDKG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	405	2.2.26 [Sep-21-2011]
Q08DG8	657	Zinc finger protein 135 O	no	N/A	0.585	0.360	0.343	2e-34
P52742	658	Zinc finger protein 135 O	yes	N/A	0.577	0.355	0.339	3e-34
Q8BPP0	452	Zinc finger protein 436 O	no	N/A	0.525	0.471	0.345	2e-33
A6NK53	670	Zinc finger protein 233 O	no	N/A	0.580	0.350	0.338	6e-33
Q9C0F3	470	Zinc finger protein 436 O	no	N/A	0.525	0.453	0.342	8e-33
A0JNB1	787	Zinc finger protein 227 O	no	N/A	0.624	0.321	0.326	1e-32
Q5TYW1	1059	Zinc finger protein 658 O	no	N/A	0.587	0.224	0.359	1e-32
Q14590	738	Zinc finger protein 235 O	no	N/A	0.580	0.318	0.330	1e-32
Q4V348	819	Zinc finger protein 658B	no	N/A	0.587	0.290	0.355	1e-32
Q86WZ6	799	Zinc finger protein 227 O	no	N/A	0.622	0.315	0.335	2e-32

>sp|Q08DG8|ZN135_BOVIN Zinc finger protein 135 OS=Bos taurus GN=ZNF135 PE=2 SV=1

 Score =  147 bits (370), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 131/271 (48%), Gaps = 34/271 (12%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAA--HHNEVHAHE 186
           Y C QC RT+     L  H+R H G       K   C  C K  +  ++   H   H  E
Sbjct: 269 YKCAQCGRTFNQIAPLIQHQRTHTG------EKPYECSECGKSFSFRSSFSQHERTHTGE 322

Query: 187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLK---SSHNFD 243
           + + C+ C K+F++ +HL  H R HTGEKPY C  C K F+  S   KH +       ++
Sbjct: 323 KPYTCSQCGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYE 382

Query: 244 FESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVH 303
            ++     T +T  +       H      ER     ++C  CG   S   +L EH R+  
Sbjct: 383 CQACGKAFTQITPLIQ------HQRIHTGERP----YECSECGRAFSQSTLLTEHRRI-- 430

Query: 304 MGLSRKYHYEYKPDGVCDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTT 360
                  H   KP G C+ CG+   +   L QH+R H   +PYAC+QC K F++  HLT 
Sbjct: 431 -------HTGEKPYG-CNECGKAFSHSSSLSQHERTHTGEKPYACSQCGKAFRQSTHLTQ 482

Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRR 391
           H R HTGEKPY+C  CG+ F+ S+ + KH+R
Sbjct: 483 HQRTHTGEKPYECSDCGKAFSHSSSLTKHQR 513

Plays a role in the regulation of cell morphology and cytoskeletal organization. May be involved in transcriptional regulation.
Bos taurus (taxid: 9913)

>sp|P52742|ZN135_HUMAN Zinc finger protein 135 OS=Homo sapiens GN=ZNF135 PE=2 SV=3

 Score =  146 bits (368), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 130/274 (47%), Gaps = 40/274 (14%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAA--HHNEVHAHE 186
           Y C QC RT+     L  H+R H G       K   C  C K  +  ++   H   H  E
Sbjct: 270 YKCTQCGRTFNQIAPLIQHQRTHTG------EKPYECSECGKSFSFRSSFSQHERTHTGE 323

Query: 187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHL------KSSH 240
           + + C+ C K+F++ +HL  H R HTGEKPY C  C K F+  S   KH       K   
Sbjct: 324 KPYECSECGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYE 383

Query: 241 NFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVR 300
             +      + TPL ++   H  +               ++C  CG   S   +L EH R
Sbjct: 384 CHECGKAFTQITPLIQHQRTHTGEK-------------PYECGECGKAFSQSTLLTEHRR 430

Query: 301 VVHMGLSRKYHYEYKPDGVCDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNH 357
           +         H   KP G C+ CG+   +   L QH+R H   +PY C+QC K F++  H
Sbjct: 431 I---------HTGEKPYG-CNECGKTFSHSSSLSQHERTHTGEKPYECSQCGKAFRQSTH 480

Query: 358 LTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRR 391
           LT H RIHTGEKPY+C+ CG+ F+ S+ + KH+R
Sbjct: 481 LTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQR 514

Plays a role in the regulation of cell morphology and cytoskeletal organization. May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8BPP0|ZN436_MOUSE Zinc finger protein 436 OS=Mus musculus GN=Znf436 PE=2 SV=1

 Score =  143 bits (361), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 126/269 (46%), Gaps = 56/269 (20%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLA--AHHNEVHAHE 186
           Y C++C +++     L  H+  H G       K  +C  C K    L+    H   H+ E
Sbjct: 176 YDCNECGKSFGRSSHLIQHQTIHTG------EKPHKCTECGKSFCRLSHLIQHQRTHSGE 229

Query: 187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFES 246
           + + C  C KSF R  HL  H RTHTGEKPY C+ C + F++ SD IKH +         
Sbjct: 230 KPYECEECGKSFSRSSHLAQHQRTHTGEKPYECHECGRGFSERSDLIKHYR--------- 280

Query: 247 VKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGL 306
           V     P                          +KCD CG   S    L  H R  H G 
Sbjct: 281 VHTGERP--------------------------YKCDECGKNFSQNSDLVRHRRA-HTG- 312

Query: 307 SRKYHYEYKPDGVCDVCGEYKKQ---LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYR 363
            + YH        C+ CGE   +   L+QH+R H   +PY CT C K+F + +HL TH +
Sbjct: 313 EKPYH--------CNECGENFSRISHLVQHQRTHTGEKPYECTACGKSFSRSSHLITHQK 364

Query: 364 IHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           IHTGEKPY+C+ C R F + +D+ KH+RT
Sbjct: 365 IHTGEKPYECNECWRSFGERSDLIKHQRT 393

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|A6NK53|ZN233_HUMAN Zinc finger protein 233 OS=Homo sapiens GN=ZNF233 PE=2 SV=3

 Score =  142 bits (357), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 140/295 (47%), Gaps = 60/295 (20%)

Query: 104 DLETLEISNTPTSAANVENKTLPLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTD 163
           D+     S T    A+    +   TY  +  DR +     L  H+R H G       K  
Sbjct: 401 DVYDKGFSQTSQLQAHQRGHSRDKTYKWEVSDRIFNRNSGL--HQRVHTG------EKPY 452

Query: 164 RCELCDKV---VTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACY 220
           +CE+CDK     +NL AH   +H  E+ + C  C+K+F R  HL+ H R HTGEKPY C 
Sbjct: 453 KCEVCDKGFSKASNLQAH-QRIHTGEKPYKCDVCDKNFSRNSHLQAHQRVHTGEKPYKCD 511

Query: 221 LCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIF 280
            C K F+QIS    HL+                           AH    K E+     +
Sbjct: 512 TCGKDFSQIS----HLQ---------------------------AHQRVHKGEKP----Y 536

Query: 281 KCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGE---YKKQLLQHKRLH 337
           KC+ CG   S    LQ+H +V H G +      YK    CDVCG+   +   L  H+R+H
Sbjct: 537 KCETCGKGFSQSSHLQDHQQV-HTGEN-----PYK----CDVCGKGFSWSSHLQAHQRVH 586

Query: 338 FPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
              +PY C +C K F   ++L  H RIHTGEKPY+C +CG+ F+Q++ ++ H+R 
Sbjct: 587 TGEKPYKCEECRKGFIWNSYLHVHQRIHTGEKPYKCGMCGKSFSQTSHLQAHQRV 641

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9C0F3|ZN436_HUMAN Zinc finger protein 436 OS=Homo sapiens GN=ZNF436 PE=2 SV=2

 Score =  141 bits (356), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 124/269 (46%), Gaps = 56/269 (20%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLA--AHHNEVHAHE 186
           Y C++C +++     L  H+  H G       K  +C  C K    L+    H   H+ E
Sbjct: 194 YDCNECGKSFGRSSHLIQHQTIHTG------EKPHKCNECGKSFCRLSHLIQHQRTHSGE 247

Query: 187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFES 246
           + + C  C KSF R  HL  H RTHTGEKPY C  C + F++ SD IKH +         
Sbjct: 248 KPYECEECGKSFSRSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYR--------- 298

Query: 247 VKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGL 306
           V     P                          +KCD CG   S    L  H R  H G 
Sbjct: 299 VHTGERP--------------------------YKCDECGKNFSQNSDLVRHRRA-HTG- 330

Query: 307 SRKYHYEYKPDGVCDVCGEYKKQ---LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYR 363
            + YH        C+ CGE   +   L+QH+R H   +PY C  C K+F + +HL TH +
Sbjct: 331 EKPYH--------CNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSRSSHLITHQK 382

Query: 364 IHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           IHTGEKPY+C+ C R F + +D+ KH+RT
Sbjct: 383 IHTGEKPYECNECWRSFGERSDLIKHQRT 411

May be a transcriptional repressor.

Homo sapiens (taxid: 9606)

>sp|A0JNB1|ZN227_BOVIN Zinc finger protein 227 OS=Bos taurus GN=ZNF227 PE=2 SV=1

 Score =  141 bits (355), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 137/294 (46%), Gaps = 41/294 (13%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHH--NEVHAHE 186
           Y C++C + +    +L VH+R H G       K  +CE C K  T  A +H    VH  E
Sbjct: 368 YKCEECGKGFGWSVNLRVHQRVHRG------EKPYKCEECGKGFTQAAHYHIHQRVHTGE 421

Query: 187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFES 246
           + + C  C K F     L  H R HTGEKPY C  C K F + +D   H +        +
Sbjct: 422 KPYKCDVCGKGFSHNSPLICHRRVHTGEKPYRCEACGKGFTRNTDLHIHFRVHTGEKPYT 481

Query: 247 VKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMG- 305
            K      ++  N  +H    + + T  +R   FKC+ CG   S    LQ H RV H G 
Sbjct: 482 CKECGKGFSQASNLQVH----QNVHTGEKR---FKCETCGKGFSQSSKLQTHQRV-HTGE 533

Query: 306 -------------------LSRKYHYEYKPDGVCDVCGE---YKKQLLQHKRLHFPLRPY 343
                              L +  H   KP   C+ CG+   ++  L  H+R+H   +PY
Sbjct: 534 KPYRCDVCGKDFSYSSNLKLHQVIHTGEKPY-TCEACGKGFSWRSNLHAHQRVHSGEKPY 592

Query: 344 ACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ 397
            C  CDK+F +      H R+HTGEKPY+C +CG+GF+QS+ ++ H+R VH  +
Sbjct: 593 KCEACDKSFSQAIDFRVHQRVHTGEKPYKCGVCGKGFSQSSGLQSHQR-VHTGE 645

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

>sp|Q5TYW1|ZN658_HUMAN Zinc finger protein 658 OS=Homo sapiens GN=ZNF658 PE=2 SV=2

 Score =  141 bits (355), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/270 (35%), Positives = 131/270 (48%), Gaps = 32/270 (11%)

Query: 129  YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAH--HNEVHAHE 186
            Y C +C +T+  K  L  H R H G       K   C +C K     AA   H  +H  E
Sbjct: 770  YECSKCGKTFSQKSYLSGHERIHTG------EKPYECNVCGKTFVYKAALIVHQRIHTGE 823

Query: 187  RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISD-RIKHLKSSHNFDFE 245
            + + C  C K+F ++ HL  H R HTGEKPY C  C K FA  S  R  H   +    +E
Sbjct: 824  KPYECNQCGKTFSQRTHLCAHQRIHTGEKPYECNECGKTFADNSALRAHHRIHTGEKPYE 883

Query: 246  SVK-NKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHM 304
                 KT   T +L  HL           R  +  ++C  CG   S K  +  H RV H 
Sbjct: 884  CNDCGKTFSKTSHLRAHLRT---------RSGEKPYECSECGKTFSEKSYVSAHQRV-HT 933

Query: 305  GLSRKYHYEYKPDGVCDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTH 361
            G      YE      C+VCG+   +   L  H+R+H   + Y C  C KTF +K+HL+ H
Sbjct: 934  GEKP---YE------CNVCGKPFAHNSTLRVHQRIHTGEKSYECNDCGKTFSQKSHLSAH 984

Query: 362  YRIHTGEKPYQCDICGRGFAQSNDMKKHRR 391
             RIHTGEKPY+C+ CG+ FAQ++ ++ H+R
Sbjct: 985  QRIHTGEKPYECNECGKAFAQNSTLRVHQR 1014

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q14590|ZN235_HUMAN Zinc finger protein 235 OS=Homo sapiens GN=ZNF235 PE=2 SV=3

 Score =  141 bits (355), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 129/275 (46%), Gaps = 40/275 (14%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLA--AHHNEVHAHE 186
           Y C++C + + +  S   H+R H G       K  RC +C K  +  +    H  VH  E
Sbjct: 487 YKCEECGKGFSSASSFQSHQRVHTG------EKPFRCNVCGKGFSQSSYFQAHQRVHTGE 540

Query: 187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFES 246
           + + C  C K F   L+L  H R HTGEKPY C  C K F+Q S+   H         +S
Sbjct: 541 KPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAH---------QS 591

Query: 247 VKNKTTPLT------RYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVR 300
           V     P        R+       AH      E+     +KCD CG   S +  LQ H +
Sbjct: 592 VHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKP----YKCDTCGKAFSQRSNLQVH-Q 646

Query: 301 VVHMGLSRKYHYEYKPDGVCDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNH 357
           ++H G         KP   C+ CG+   +   L  H+R+H   +PY C QC K F + +H
Sbjct: 647 IIHTG--------EKPF-KCEECGKEFSWSAGLSAHQRVHTGEKPYTCQQCGKGFSQASH 697

Query: 358 LTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
             TH R+HTGE+PY CD+C +GF+Q + +  H+R 
Sbjct: 698 FHTHQRVHTGERPYICDVCCKGFSQRSHLIYHQRV 732

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q4V348|Z658B_HUMAN Zinc finger protein 658B OS=Homo sapiens GN=ZNF658B PE=2 SV=1

 Score =  140 bits (354), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/270 (35%), Positives = 130/270 (48%), Gaps = 32/270 (11%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAH--HNEVHAHE 186
           Y C +C +T+  K  L  H R H G       K   C +C K     AA   H  +H  E
Sbjct: 530 YECSKCGKTFSQKSYLSGHERIHTG------EKPYECNVCGKTFVYKAALIVHQRIHTGE 583

Query: 187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISD-RIKHLKSSHNFDFE 245
           + + C  C K+F ++ HL  H R HTGEKPY C  C K FA  S  R  H   +    +E
Sbjct: 584 KPYECNECGKTFSQRTHLCAHQRIHTGEKPYECNECGKTFADNSALRAHHRIHTGEKPYE 643

Query: 246 SVK-NKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHM 304
                KT   T +L  HL           R  +  ++C  CG   S K  +  H RV   
Sbjct: 644 CNDCGKTFSKTSHLRAHLRT---------RSGEKPYECSECGKTFSEKSYVSAHQRV--- 691

Query: 305 GLSRKYHYEYKPDGVCDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTH 361
                 H   KP   C+VCG+   +   L  H+R+H   + Y C  C KTF +K+HL+ H
Sbjct: 692 ------HTGEKPY-ECNVCGKPFAHNSTLRVHQRIHTGEKSYECNDCGKTFSQKSHLSAH 744

Query: 362 YRIHTGEKPYQCDICGRGFAQSNDMKKHRR 391
            RIHTGEKPY+C+ CG+ FAQ++ ++ H+R
Sbjct: 745 QRIHTGEKPYECNECGKAFAQNSTLRVHQR 774

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q86WZ6|ZN227_HUMAN Zinc finger protein 227 OS=Homo sapiens GN=ZNF227 PE=2 SV=1

 Score =  140 bits (353), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 138/295 (46%), Gaps = 43/295 (14%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAH---HNEVHAH 185
           Y C++C + +    +L VH+R H G       K  +CE C K  T  AAH   H  VH  
Sbjct: 380 YKCEECGKGFGWSVNLRVHQRVHRG------EKPYKCEECGKGFTQ-AAHFHIHQRVHTG 432

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFE 245
           E+ + C  C K F     L  H R HTGEKPY C  C K F + +D   H +        
Sbjct: 433 EKPYKCDVCGKGFSHNSPLICHRRVHTGEKPYKCEACGKGFTRNTDLHIHFRVHTGEKPY 492

Query: 246 SVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMG 305
             K      ++  N  +H    + + T  +R   FKC+ CG   S    LQ H RV H G
Sbjct: 493 KCKECGKGFSQASNLQVH----QNVHTGEKR---FKCETCGKGFSQSSKLQTHQRV-HTG 544

Query: 306 --------------------LSRKYHYEYKPDGVCDVCGE---YKKQLLQHKRLHFPLRP 342
                               L +  H   KP   C+ CG+   ++  L  H+R+H   +P
Sbjct: 545 EKPYRCDVCGKDFSYSSNLKLHQVIHTGEKPY-KCEECGKGFSWRSNLHAHQRVHSGEKP 603

Query: 343 YACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ 397
           Y C QCDK+F +      H R+HTGEKPY+C +CG+GF+QS+ ++ H+R VH  +
Sbjct: 604 YKCEQCDKSFSQAIDFRVHQRVHTGEKPYKCGVCGKGFSQSSGLQSHQR-VHTGE 657

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
328715046	392	PREDICTED: zinc finger protein 271-like	0.639	0.660	0.354	7e-37
410054508	541	PREDICTED: zinc finger protein 347-like	0.612	0.458	0.340	2e-35
328710109	430	PREDICTED: zinc finger protein 135-like	0.590	0.555	0.362	3e-35
441630695	544	PREDICTED: zinc finger protein 160-like	0.612	0.455	0.336	9e-35
328704791	339	PREDICTED: zinc finger protein 271-like	0.592	0.707	0.366	1e-34
328702980	414	PREDICTED: zinc finger protein 271-like,	0.602	0.589	0.352	1e-34
328708421	434	PREDICTED: zinc finger protein 271-like	0.664	0.619	0.346	3e-34
328726418	484	PREDICTED: zinc finger protein 271-like	0.595	0.497	0.368	3e-34
328712679	716	PREDICTED: zinc finger protein 271-like	0.592	0.335	0.366	5e-34
301788764	1836	PREDICTED: zinc finger protein 91-like [	0.612	0.135	0.334	7e-34

>gi|328715046|ref|XP_001949223.2| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 151/299 (50%), Gaps = 40/299 (13%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAH 185
           Y CD CD+++    SL +HRR H G       K   C++CDK  +   NL  H   +H  
Sbjct: 106 YACDVCDKSFSVSDSLTIHRRTHTG------EKPYACDVCDKSFSENGNLTKH-KRIHTG 158

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFE 245
           E+ + C  C+KSF    HL  H RTHTGEKPYAC +CDK F++     KH ++ H  +  
Sbjct: 159 EKPYACDVCDKSFSLSHHLMTHRRTHTGEKPYACDVCDKSFSESGSLTKHQRT-HTGEKP 217

Query: 246 ---SVKNKTTPLTRYLNKH--LHDA--------------HPEAIKTERE---RKLIFKCD 283
               V +K+  ++  L  H  +H                 P  + T R     +  F CD
Sbjct: 218 YACDVCDKSFSISSGLTTHKRIHTGEKPYACDVCDKSFSQPNNLTTHRRTHTGEKPFACD 277

Query: 284 LCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPY 343
           +C    S    L  H R+ H G        Y  D VCD+         +H+R H   +PY
Sbjct: 278 VCDKSFSENGSLTVHKRM-HTGEK-----PYACD-VCDMSFSESGSFTKHQRTHTGEQPY 330

Query: 344 ACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE 402
           AC  CDK+F + ++LTTH RIHTGEKPY CD+C + F+QS+++ +HRRT    +++A +
Sbjct: 331 ACDVCDKSFSQSSNLTTHKRIHTGEKPYACDVCDKSFSQSSNLTRHRRTHTGEKLYACD 389

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|410054508|ref|XP_003953662.1| PREDICTED: zinc finger protein 347-like [Pan troglodytes]

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/288 (34%), Positives = 145/288 (50%), Gaps = 40/288 (13%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKV---VTNLAAHHNEVHAH 185
           Y C++C +T+    +L  H+R H G       K  +C++C K    + NLA+HH  +H  
Sbjct: 259 YRCNECGKTFNQTFNLTTHQRIHTG------QKPHKCDICGKGFRQIGNLASHH-RIHTG 311

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFE 245
           E+ + C  C K+F R  HL  H R HTG+KPY C +C K F QI++    L S H     
Sbjct: 312 EKPYRCNECGKTFNRMFHLTRHQRIHTGQKPYKCDICGKGFRQIAN----LASHHRIHTG 367

Query: 246 SVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRV---- 301
               K +   +  N   H    + I T ++    +KCD CG   S    L+ H R+    
Sbjct: 368 EKPYKCSDCGKTFNYRSHLTRHQRIHTGQK---PYKCDTCGKDFSQNSYLENHQRIHTRE 424

Query: 302 ---------------VHMGLSRKYHYEYKPDGVCDVCGEYKKQ---LLQHKRLHFPLRPY 343
                           ++   ++ H   KP   CD+CG+  +Q   L  H R+H   +PY
Sbjct: 425 KSYRCNECGKTFNKMTNLTTHQRIHTGQKPY-KCDICGKDFRQIGNLASHHRIHTGEKPY 483

Query: 344 ACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRR 391
            C +C KTF +  HLT H RIHTG+KPY+CDICG+ F+Q++ ++ H+R
Sbjct: 484 RCNECGKTFNRMFHLTRHQRIHTGQKPYKCDICGKSFSQNSYLENHQR 531

Source: Pan troglodytes

Species: Pan troglodytes

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328710109|ref|XP_001948812.2| PREDICTED: zinc finger protein 135-like [Acyrthosiphon pisum]

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 137/273 (50%), Gaps = 34/273 (12%)

Query: 128 TYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDK--VVTNLAAHHNEVHAH 185
           +Y CD CD+++    +L +HRR H G       K   C++CDK   V++    H   H  
Sbjct: 61  SYLCDVCDKSFSQIGNLMIHRRTHTG------EKPYACDICDKSFAVSDSLTKHKRTHTG 114

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFE 245
           E+ + C  C+KSF +   L  H RTHTGEKPYAC +CDK FA IS+ + + + +H  +  
Sbjct: 115 EKPYACDVCDKSFSQSCSLTNHKRTHTGEKPYACDICDKSFA-ISNNLTNHQRTHTGEKP 173

Query: 246 ---SVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVV 302
               + +K+   +  L  H      E           + CD+C    S    L +H R  
Sbjct: 174 YACDICDKSFSQSSNLTNHQRTHTGEKP---------YACDICDKSFSQSSNLTKHQRT- 223

Query: 303 HMGLSRKYHYEYKPDGVCDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLT 359
                   H   KP   CD+C +       L +HKR H   +PYAC  CDK+F   N+LT
Sbjct: 224 --------HTGEKP-YACDICDKSFAVSDSLTKHKRTHTGEKPYACDICDKSFAISNNLT 274

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
            H R HTGEKPY CDIC + FA S+ + KH+RT
Sbjct: 275 NHQRTHTGEKPYACDICDKSFAVSDSLTKHKRT 307

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|441630695|ref|XP_004089567.1| PREDICTED: zinc finger protein 160-like [Nomascus leucogenys]

 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 146/288 (50%), Gaps = 40/288 (13%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKV---VTNLAAHHNEVHAH 185
           Y C++C +T+    +L  H+R H G       K  +C++C K    + NLA+HH  +H  
Sbjct: 221 YKCNECGKTFNQMFNLTTHQRIHTG------QKPYKCDICGKGFRQIGNLASHH-IIHTG 273

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFE 245
           E+ + C  C K+F R  HL  H R HTG+KPY C +C K F QI++    L S H     
Sbjct: 274 EKPYRCNECGKTFNRMFHLTRHQRIHTGQKPYKCDICGKGFRQIAN----LASHHRIHTG 329

Query: 246 SVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRV---- 301
               K +   +  N   H    + I T ++    +KCD+CG   S    L+ H R+    
Sbjct: 330 EKPYKCSDCGKTFNYRSHLTRHQRIHTGQK---PYKCDICGKDFSQNSYLENHQRIHTRE 386

Query: 302 ---------------VHMGLSRKYHYEYKPDGVCDVCGEYKKQ---LLQHKRLHFPLRPY 343
                          +++   ++ H   K    CD+CG+  +Q   L  H R+H   +PY
Sbjct: 387 KSYRCNECGKTFNKMINLTTHQRIHTAQKTY-KCDICGKGFRQIGNLASHHRIHTGEKPY 445

Query: 344 ACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRR 391
            C +C KTF +  HLT H RIHTG+KPY+CDICG+ F+Q++ ++ H+R
Sbjct: 446 RCNECGKTFNRMFHLTRHQRIHTGQKPYKCDICGKSFSQNSYLENHQR 493

Source: Nomascus leucogenys

Species: Nomascus leucogenys

Genus: Nomascus

Family: Hylobatidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328704791|ref|XP_003242604.1| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 132/270 (48%), Gaps = 30/270 (11%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAH 185
           YPCD CD+++     L  H+R H G       K   C++CDK  +   NL +H    H  
Sbjct: 62  YPCDVCDKSFSQSSGLTSHQRTHTG------EKPYACDVCDKSFSQSSNLMSH-QRTHTG 114

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFE 245
           E+ +PC  C+KSF    HL  H RTHTGEKPYAC +CDK F+Q S    H ++       
Sbjct: 115 EKPYPCDVCDKSFAENSHLTTHRRTHTGEKPYACDVCDKSFSQSSVLTNHQRTHTGEKPY 174

Query: 246 SVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMG 305
           +        ++ +N   H       +T    K  + CD+C    S    L  H       
Sbjct: 175 ACDVCDKSFSQSINLMSHQ------RTHTGEK-PYPCDICDKSFSENSHLTTH------- 220

Query: 306 LSRKYHYEYKPDGVCDVCGEYKKQ---LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHY 362
             R+ H   KP   CDVC +   Q   L  H+R H   +PYAC  CDK+F   +HLT H 
Sbjct: 221 --RRTHTGEKP-YACDVCDKSFSQSSGLTNHQRTHTGDKPYACDVCDKSFSVSSHLTRHR 277

Query: 363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           R HTGEKPY C +C + F+ S ++  HRRT
Sbjct: 278 RTHTGEKPYACHVCDKSFSTSGELTNHRRT 307

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328702980|ref|XP_001947926.2| PREDICTED: zinc finger protein 271-like, partial [Acyrthosiphon pisum]

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/278 (35%), Positives = 139/278 (50%), Gaps = 34/278 (12%)

Query: 123 KTLPLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLA--AHHN 180
           + L   YPCD C + +     L +H+R H G       K   C++CDK  ++      H 
Sbjct: 45  RVLDKRYPCDVCGKLFNQNSQLMIHKRTHTG------EKPYPCDVCDKWFSDNGQLTIHK 98

Query: 181 EVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSH 240
             H  E+ +PC  C+KSF +  +L +H RTHTGEKPY C +CDK F++      H K +H
Sbjct: 99  RTHTGEKPYPCDVCDKSFAQSNNLTIHKRTHTGEKPYPCDVCDKWFSRNQQLTVH-KRTH 157

Query: 241 NFDFE---SVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQE 297
             +      V +KT   ++ L  H         K     +  + CD+C    S  H    
Sbjct: 158 TGEKPYPCDVCDKTFSRSQQLTVH---------KRTHTGEKPYPCDVCDKTFSRNH---- 204

Query: 298 HVRVVHMGLSRKYHYEYKPDGVCDVCGEY---KKQLLQHKRLHFPLRPYACTQCDKTFKK 354
                H+ L ++ H   KP   CDVC ++     +L  H+R H   +PY C  CDK+F +
Sbjct: 205 -----HLTLHKRTHTGEKP-YPCDVCDKWFAGSSELTVHRRTHTGEKPYPCDVCDKSFAQ 258

Query: 355 KNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
            N+LT H R HTGEKPY CD+C + FA SN++  HRRT
Sbjct: 259 SNNLTIHKRTHTGEKPYPCDVCDKWFAGSNELTVHRRT 296

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328708421|ref|XP_001947682.2| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 147/303 (48%), Gaps = 34/303 (11%)

Query: 98  TRTSADDLETLEISNTPTSAANVENKTLPLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYR 157
           + T + + E   + NT T     + K    +Y CD CD+++    +L +HRR H G    
Sbjct: 35  SETVSPNYEVPSVYNTDTVQTTDKRKMEKNSYLCDVCDKSFSQIGNLMIHRRTHTG---- 90

Query: 158 YKSKTDRCELCDKVVTNLAA--HHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEK 215
              K   C++CDK  +   +  +H   H  E+ + C  C+KSF R   L  H RTHTGEK
Sbjct: 91  --EKPYACDICDKSFSQSCSLTNHKRTHTGEKPYACDICDKSFARSDSLTNHKRTHTGEK 148

Query: 216 PYACYLCDKRFAQISDRIKHLKSSHNFDFE---SVKNKTTPLTRYLNKHLHDAHPEAIKT 272
           PYAC +CDK F       KH K +H  +      + +K+  ++  L KH      E    
Sbjct: 149 PYACDICDKSFVLSGSLTKH-KRTHTGEKPYACDICDKSFAVSGSLTKHQRTHTGEK--- 204

Query: 273 ERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQ--- 329
                  + CD+C    S+   L  H         R+ H   KP  VCDVC +   Q   
Sbjct: 205 ------PYACDICDKSFSTSSSLTTH---------RRTHIGEKP-YVCDVCDKSFSQSGN 248

Query: 330 LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKH 389
           L +H+R H   +PYAC  CDK+F   + LT H R HTGEKPY CD+C + F+QS  +  H
Sbjct: 249 LTKHQRTHTGEKPYACDICDKSFAVSDSLTNHKRTHTGEKPYACDVCDKSFSQSCSLTNH 308

Query: 390 RRT 392
           +RT
Sbjct: 309 KRT 311

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328726418|ref|XP_003248889.1| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 134/269 (49%), Gaps = 28/269 (10%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVV--TNLAAHHNEVHAHE 186
           YPCD CD+T+ +  +L  HRR H G       K   C++CDK    ++    H   H  E
Sbjct: 101 YPCDVCDKTFGSSSTLTKHRRTHTG------EKPYSCDVCDKTFGSSSTLTKHRRTHTGE 154

Query: 187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFE- 245
           + +PC  C+K+F     L  H RTHTGEKPY C +C+K F   S+  KH ++ H  +   
Sbjct: 155 KPYPCDVCDKTFGSSSTLTKHRRTHTGEKPYPCDVCEKTFGSSSNLTKHRRT-HTGEKPY 213

Query: 246 --SVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVH 303
              V +K+      L  H        I+T    K  + CDLC    S +  L+ H+R  H
Sbjct: 214 PCDVCDKSFSQKSILENH--------IRTHTGEK-PYSCDLCDKSFSQRGTLEYHLRT-H 263

Query: 304 MGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYR 363
            G  + Y     P  VC+        L +H+R H   +PY C  CDKTF   + LT H R
Sbjct: 264 TG-EKPY-----PCDVCEKTFGSSSTLTKHRRTHTGEKPYPCDVCDKTFGSSSTLTEHRR 317

Query: 364 IHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
            HTGEKPY CD+C + F  S+ + KHRRT
Sbjct: 318 THTGEKPYPCDVCDKTFGSSSTLTKHRRT 346

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328712679|ref|XP_003244876.1| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 136/270 (50%), Gaps = 30/270 (11%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDK---VVTNLAAHHNEVHAH 185
           YPCD CD+++     L  HRR H G       K   C++CDK   V ++L  HH   H  
Sbjct: 158 YPCDVCDKSFIDNSCLTEHRRTHTG------EKPYPCDVCDKSFSVSSSLTKHH-RTHTG 210

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFE 245
           E+ +PC  C+KSF     L  H R HTGEKPY C +CDK F++     KH +  H  +  
Sbjct: 211 EKPYPCDVCDKSFSVSSSLTTHYRKHTGEKPYPCDVCDKSFSESGSLTKHYRM-HTGEKP 269

Query: 246 ---SVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVV 302
               V +K+  ++  L KH H  H          +  + CD+C    S    L  H R  
Sbjct: 270 YPCDVCDKSFSVSSSLTKH-HRTH--------TGEKPYPCDVCDKSFSESSSLTTHYRK- 319

Query: 303 HMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHY 362
           H G  + Y     P  VCD     +  L++H R+H   +P+ C  CDK+F   +HLT H 
Sbjct: 320 HTG-EKPY-----PCDVCDKSFSERNSLIKHHRMHTGEKPFPCDVCDKSFNNNSHLTVHR 373

Query: 363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           R HTGEKPY CD+C + F+ ++ +K HRRT
Sbjct: 374 RTHTGEKPYPCDVCDKSFSDNSRLKVHRRT 403

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|301788764|ref|XP_002929799.1| PREDICTED: zinc finger protein 91-like [Ailuropoda melanoleuca]

 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 146/290 (50%), Gaps = 42/290 (14%)

Query: 129  YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVV--TNLAAHHNEVHAHE 186
            Y C+ C++ +  + SL +H+R H G       K   C+ C K    +   AHH  +H  E
Sbjct: 1421 YECNICEKAFSHRGSLTLHQRVHTG------EKPYECKECGKAFRQSTHLAHHQRIHTGE 1474

Query: 187  RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKS-SHNFDFE 245
            + + C  C K+F +  HL  H + HTGEKPY C  C K F+QI+  ++H +  +    +E
Sbjct: 1475 KPYECKECSKTFSQNAHLAQHQKVHTGEKPYECKECGKAFSQIAHLVQHQRVHTGEKPYE 1534

Query: 246  SVK-NKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRV--- 301
             ++  K      YL+ H      + I T  +    F+CD+CG     +  L  H RV   
Sbjct: 1535 CIECGKAFSDGSYLSGH------QRIHTGEK---PFECDVCGKHFIERSSLTIHQRVHTG 1585

Query: 302  ----------------VHMGLSRKYHYEYKPDGVCDVCGE-YKK--QLLQHKRLHFPLRP 342
                            +++ + ++ H   KP   CDVCG+ ++K   L QH+R+H   +P
Sbjct: 1586 EKPYRCGDCGKAFSQRMNLIVHQRTHTGEKPY-ACDVCGKAFRKTSSLAQHERIHTGEKP 1644

Query: 343  YACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
            YAC  C K F +  HL  H R HTGEKPY CD+CGR F+Q+  + +H+RT
Sbjct: 1645 YACGDCGKAFSQNMHLIVHQRTHTGEKPYACDVCGRAFSQNMHLTEHQRT 1694

Source: Ailuropoda melanoleuca

Species: Ailuropoda melanoleuca

Genus: Ailuropoda

Family: Ursidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
UNIPROTKB|F1NXS0	596	F1NXS0 "Uncharacterized protei	0.604	0.411	0.362	2e-43
UNIPROTKB|C9K0H3	546	ZNF28 "Zinc finger protein 28"	0.604	0.448	0.350	1.9e-39
UNIPROTKB|Q5VIY5	522	ZNF468 "Zinc finger protein 46	0.624	0.484	0.337	8.3e-39
UNIPROTKB|P0CJ79	500	ZNF888 "Zinc finger protein 88	0.624	0.506	0.346	1.7e-38
UNIPROTKB|A5D7K3	464	ZFP2 "Uncharacterized protein"	0.607	0.530	0.335	3.5e-38
UNIPROTKB|J9P0A1	463	ZFP2 "Uncharacterized protein"	0.607	0.531	0.335	3.5e-38
UNIPROTKB|I3LT86	573	ZNF311 "Uncharacterized protei	0.617	0.436	0.326	4.5e-38
UNIPROTKB|F1RMT4	908	F1RMT4 "Uncharacterized protei	0.609	0.272	0.338	6.9e-38
ZFIN|ZDB-GENE-060503-58	499	si:dkey-20i20.11 "si:dkey-20i2	0.617	0.501	0.333	7e-38
UNIPROTKB|E1BCC4	646	LOC787057 "Uncharacterized pro	0.612	0.383	0.334	9.3e-38

UNIPROTKB|F1NXS0 F1NXS0 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 431 (156.8 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
 Identities = 98/270 (36%), Positives = 138/270 (51%)

Query:   129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTN---LAAHHNEVHAH 185
             Y C  C+RT+    +L    R H+ +  R   K  RCE C +   N   L +H   VH+ 
Sbjct:   341 YKCRACERTFTDMSTL----RRHVSV--RQPQKLYRCETCSQTFVNRCNLKSHQRHVHSS 394

Query:   186 ERKFPCTFCEKSFKRKLHLK-VHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDF 244
             ER FPC  C K FKRK  +K +H RTHTG+KPY C  C+ +F+Q S    H++  H  + 
Sbjct:   395 ERHFPCELCGKKFKRKKDVKRLHERTHTGDKPYGCTECEAKFSQPSALKTHMRI-HTGEK 453

Query:   245 ESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHM 304
               V ++     R+   H+   H      ER     F C+ CG   +SK  L+ H R+ H 
Sbjct:   454 PFVCDECG--ARFTQNHMLIYHKRCHTGERP----FMCETCGKSFASKEYLKHHNRI-HT 506

Query:   305 GLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRI 364
             G S+ +  E     VC      +  L QH ++H   RPY C QC K F + N L  H+RI
Sbjct:   507 G-SKPFKCE-----VCFRTFAQRNSLYQHIKVHTGERPYCCDQCGKQFTQLNALQRHHRI 560

Query:   365 HTGEKPYQCDICGRGFAQSNDMKKHRRTVH 394
             HTGEKP+ C+ CGR F   + +++H  ++H
Sbjct:   561 HTGEKPFMCNACGRTFTDKSTLRRHT-SIH 589

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|C9K0H3 ZNF28 "Zinc finger protein 28" [Homo sapiens (taxid:9606)]

 Score = 397 (144.8 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
 Identities = 102/291 (35%), Positives = 138/291 (47%)

Query:   129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLA--AHHNEVHAHE 186
             Y C  CD+ +     L  H   H G       K  +C  C KV   L+  A H  +H  E
Sbjct:   274 YKCKVCDKAFTCNSYLAKHTIIHTG------EKPYKCNECGKVFNRLSTLARHRRLHTGE 327

Query:   187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHL------KSSH 240
             + + C  CEK F RK HL+ H R HTGEKPY C +CDK FA  S   KH       K   
Sbjct:   328 KPYECEECEKVFSRKSHLERHKRIHTGEKPYKCKVCDKAFAYNSYLAKHSIIHTGEKPYK 387

Query:   241 NFDFESVKNKTTPLTRYLNKHLHDAH-P----EAIKT-------ERERKLI-----FKCD 283
               +   V N+ + L R+    LH A  P    E  K        ER R++      +KC 
Sbjct:   388 CNECGKVFNQQSTLARH--HRLHTAEKPYKCEECDKVFRCKSHLERHRRIHTGEKPYKCK 445

Query:   284 LCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEY---KKQLLQHKRLHFPL 340
             +C     S   L EH RV H G  + Y        +C+ CG+    K  L  H +LH   
Sbjct:   446 VCDKAFRSDSCLTEHQRV-HTG-EKPY--------MCNECGKVFSTKANLACHHKLHTAE 495

Query:   341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRR 391
             +PY C +C+K F +K+H+  H RIHTGEKPY+C +C + F + + + +H+R
Sbjct:   496 KPYKCEECEKVFSRKSHMERHRRIHTGEKPYKCKVCDKAFRRDSHLAQHQR 546

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q5VIY5 ZNF468 "Zinc finger protein 468" [Homo sapiens (taxid:9606)]

 Score = 393 (143.4 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
 Identities = 98/290 (33%), Positives = 143/290 (49%)

Query:   131 CDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAH--HNEVHAHERK 188
             CD C + +  K+ L  HRR H G       K  +C  C K   + ++   H  +H  E+ 
Sbjct:   245 CDVCGKVFNQKRYLACHRRCHTG------EKPYKCNECGKTFGHNSSLFIHKALHTGEKP 298

Query:   189 FPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKH--LKSSHN----F 242
             + C  C+K F RK HL+ H R HTGEKPY C +CD+ FA  S   KH  L +        
Sbjct:   299 YECEECDKVFSRKSHLERHKRIHTGEKPYKCKVCDEAFAYNSYLAKHTILHTGEKPYTCN 358

Query:   243 DFESVKNKTTPLTRYLNKHLHDAH---PEAIKT-------ERERKLI-----FKCDLCGN 287
             +   V N+ + L R+   H  +      E  K        ER R++      +KC+ C  
Sbjct:   359 ECGKVFNRLSTLARHHRLHTGEKPYKCEECDKVFSRKSHLERHRRIHSGEKPYKCEECCK 418

Query:   288 ILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQ 347
             + S K  L+ H R+ H G   +  Y+ K   VCD   +    L QH+R+H   +PY C +
Sbjct:   419 VFSRKSNLERHRRI-HTG---EKPYKCK---VCDKAFQRDSHLAQHQRVHTGEKPYKCNE 471

Query:   348 CDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ 397
             C KTF + + L  H R+HTGEKPY+C+ CG+ F+Q + +  H R +H  +
Sbjct:   472 CGKTFGQTSSLIIHRRLHTGEKPYKCNECGKTFSQMSSLVYHHR-LHSGE 520

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|P0CJ79 ZNF888 "Zinc finger protein 888" [Homo sapiens (taxid:9606)]

 Score = 390 (142.3 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
 Identities = 102/294 (34%), Positives = 142/294 (48%)

Query:   129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVV---TNLAAHHNEVHAH 185
             Y C++C +T+  K +L VH+  H G       K  +C  C KV    +NLA HH  VH  
Sbjct:   165 YKCNECGKTFSDKSALLVHKTIHTG------EKPYKCNECGKVFNQQSNLARHHR-VHTG 217

Query:   186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFE 245
             E+ + C  C+K F RK +L+ H R HTGEKPY C +CDK F   S   +H+   H  + +
Sbjct:   218 EKPYQCKECDKVFSRKSYLERHRRIHTGEKPYKCKVCDKAFRHDSHLAQHIVI-HTRE-K 275

Query:   246 SVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMG 305
               K      T   N  L   H    KT    +  +KC+ CG + + +  L  H R+ H G
Sbjct:   276 PYKCNECGKTFGENSALL-VH----KTIHTGEKPYKCNECGKVFNQQSNLARHHRL-HTG 329

Query:   306 ------------LSRKYHYEY--------KPDG--VCDVCGEYKKQLLQHKRLHFPLRPY 343
                          SRK H E         KP    VCD       +L  H RLH   +PY
Sbjct:   330 EKPYKCKECDKVFSRKSHLERHRRIHTGEKPYKCKVCDKAFRRDSRLAYHHRLHTGEKPY 389

Query:   344 ACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ 397
              C +C K F+ ++ L  H+R+HTGEKPY+C+ C + F   + ++ HRR VH  +
Sbjct:   390 KCNECGKVFRTQSQLACHHRLHTGEKPYKCEECDKVFNIKSHLEIHRR-VHTGE 442

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|A5D7K3 ZFP2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 387 (141.3 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
 Identities = 98/292 (33%), Positives = 145/292 (49%)

Query:   129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAH 185
             Y C +C + ++   SL  H R H G       K  +C  C K  T   NL  H    H  
Sbjct:   189 YQCKECGKAFRKNSSLIQHERIHTG------EKPYKCNECGKAFTQSMNLTVHQR-THTG 241

Query:   186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFD-- 243
             E+ + C  C K+F + +HL VH R+HTGEKPY C  C K F++ S    H ++ H  +  
Sbjct:   242 EKPYECNECGKAFSQSMHLTVHQRSHTGEKPYECSECGKAFSKSSALTLHQRN-HTGEKP 300

Query:   244 FESVK-NKTTPLTRYLNKH--LHDA-HP-------EAIK-----TERER----KLIFKCD 283
             ++  K  K+   + YL +H  LH    P       +A       T+  R    +  ++C 
Sbjct:   301 YKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNQCGKAFSKNSSLTQHRRIHTGEKPYECM 360

Query:   284 LCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQ---LLQHKRLHFPL 340
             +CG   + +  L  H +V+H G   +  YE      C  CG+   Q   L++H+R+H   
Sbjct:   361 VCGKHFTGRSSLTVH-QVIHTG---EKPYE------CSECGKAFSQSAYLIEHQRIHTGE 410

Query:   341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
             +PY C QC K F K + L  H R HTGEKPYQC+ CG+ F++S ++ +H+RT
Sbjct:   411 KPYECDQCGKAFIKNSSLIVHQRTHTGEKPYQCNECGKAFSRSTNLTRHQRT 462

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9P0A1 ZFP2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 387 (141.3 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
 Identities = 98/292 (33%), Positives = 146/292 (50%)

Query:   129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAH 185
             Y C +C + ++   SL  H R H G       K  +C  C K  T   NL  H    H  
Sbjct:   188 YQCKECGKAFRKNSSLIQHERIHTG------EKPYKCNECGKAFTQSMNLTVHQR-THTG 240

Query:   186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFD-- 243
             E+ + C  C K+F + +HL VH R+HTGEKPY C  C K F++ S    H ++ H  +  
Sbjct:   241 EKPYECNECGKAFSQSMHLIVHQRSHTGEKPYECSECGKAFSKSSTLTLHQRN-HTGEKP 299

Query:   244 FESVK-NKTTPLTRYLNKH--LHDA-HP-------EAIK-----TERER----KLIFKCD 283
             ++  K  K+   + YL +H  LH    P       +A       T+  R    +  ++C 
Sbjct:   300 YKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNQCGKAFSKNSSLTQHRRIHTGEKPYECM 359

Query:   284 LCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQ---LLQHKRLHFPL 340
             +CG   + +  L  H +V+H G   +  YE      C+ CG+   Q   L++H+R+H   
Sbjct:   360 VCGKHFTGRSSLTVH-QVIHTG---EKPYE------CNECGKAFSQSAYLIEHQRIHTGE 409

Query:   341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
             +PY C QC K F K + L  H R HTGEKPYQC+ CG+ F++S ++ +H+RT
Sbjct:   410 KPYECDQCGKAFIKNSSLIVHQRTHTGEKPYQCNECGKAFSRSTNLTRHQRT 461

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|I3LT86 ZNF311 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 387 (141.3 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
 Identities = 97/297 (32%), Positives = 150/297 (50%)

Query:   129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKV--VTNLAAHHNEVHAHE 186
             + C QC + + ++ SL  H++ H G       K  +C  C K     N    H  +H  E
Sbjct:   210 FDCSQCGKAFNSRSSLCRHKKTHSG------EKPYQCSDCGKAFKTRNRLRMHQMIHTGE 263

Query:   187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFD--F 244
             + + C  C K+F+ K  L VH R+HTGEKPYAC  C K F+  SD IKH +  H  +  +
Sbjct:   264 KPYECNICGKAFQFKHSLIVHGRSHTGEKPYACEECGKAFSGSSDLIKHTRI-HTGERPY 322

Query:   245 ESVK-----NKTTPLTRYLNKHLHDAH-------------PEAIKTER---ERKLIFKCD 283
             E  +     ++++ L+++   H+   H             PE  K  R   E K  +KC 
Sbjct:   323 ECSECGRAFSRSSDLSKHKRIHIQGKHYGCPQCGKVFSSKPELTKHRRIHTEEKP-YKCK 381

Query:   284 LCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGE-YKKQ--LLQHKRLHFPL 340
              CG     +H  +   R  H     + H   KP G C  CG+ ++ +  L  H+R+H   
Sbjct:   382 ECGKAF--RHNCK---RRAH----EREHTGEKPYG-CGDCGKTFQDRHCLTVHQRIHTGE 431

Query:   341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ 397
             +PY C +C + F  K++LT H RIHTGEKPY+C++CG+ F  S+ +++H+R +H  +
Sbjct:   432 KPYKCAECGRAFSGKSNLTNHQRIHTGEKPYKCEVCGKAFHHSSVLRQHKR-IHTGE 487

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1RMT4 F1RMT4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 396 (144.5 bits), Expect = 6.9e-38, Sum P(2) = 6.9e-38
 Identities = 92/272 (33%), Positives = 139/272 (51%)

Query:   129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAH 185
             Y C++C R +    +LY+H+R H G       K  +CE C K  +   +L AH   +H  
Sbjct:   408 YKCEECGRGFICSSNLYIHQRVHTG------EKPYKCEECGKGFSRPSSLQAHQG-IHTG 460

Query:   186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFE 245
             E+ + C  C KSF+R  H +VH   HTGEKPY C +C K F+Q S    H K+ H+ +  
Sbjct:   461 EKPYKCDECGKSFRRNSHYQVHLVVHTGEKPYKCEVCGKGFSQSSYLQIHQKA-HSIE-- 517

Query:   246 SVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMG 305
                 K     +  N+       + I T  +    +KC+ CG   S +  L+ H R+ H G
Sbjct:   518 -KPYKCEECGQGFNQSSRLQIHQLIHTGEKP---YKCEDCGKGFSRRADLKIHCRI-HTG 572

Query:   306 LSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIH 365
               + Y+ E      C         LL H+R+H   +P+ C +C K+F + +HL  H ++H
Sbjct:   573 -EKPYNCEE-----CGKVFRQASNLLAHQRVHSGEKPFKCEECGKSFGRSSHLQAHQKVH 626

Query:   366 TGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ 397
             TGEKPY+C+ CG+GF  S ++  H+R VH  +
Sbjct:   627 TGEKPYKCEECGKGFKWSLNLDMHQR-VHTGE 657

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-060503-58 si:dkey-20i20.11 "si:dkey-20i20.11" [Danio rerio (taxid:7955)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 93/279 (33%), Positives = 129/279 (46%)

Query:   131 CDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAHER 187
             C QC +++  K +L  H R H G       K  +C  CD+  +   NL +H    H  E+
Sbjct:    62 CTQCGKSFTRKSTLNYHMRIHTG------EKPYKCSHCDRRFSCSQNLKSH-TRTHTGEK 114

Query:   188 KFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESV 247
              + C++C + F+    LK H RTHTGEKPY C  C K F   S    H KS H     +V
Sbjct:   115 PYQCSYCSRRFRHSGVLKKHLRTHTGEKPYHCTACGKSFTDPSSLRTHTKSYHKV---TV 171

Query:   248 KNKTTPLTRYLNKHLHDAHPEAIKTERERKL--------IFKCDLCGNILSSKHILQEHV 299
             K ++  +     KH   +  E  ++E E  +         F C  CG   S K  L  H+
Sbjct:   172 KEESEEMNEDEEKHQVKSE-EKTQSETEDIISVKGTAVKYFTCTQCGKSFSFKSTLNYHM 230

Query:   300 RVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLT 359
             R+ H G  + Y   Y     CD    + + L  H+R H   +PY C+ C K F    +L 
Sbjct:   231 RI-HTG-EKPYQCSY-----CDKRFSHSRYLKSHERTHTGEKPYQCSHCGKRFSDSTNLK 283

Query:   360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQI 398
             TH R HTGEKPY C  CG+ F  S+ ++KH    H   +
Sbjct:   284 THLRTHTGEKPYHCTACGKSFTSSSSLRKHTINCHNVMV 322

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|E1BCC4 LOC787057 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 393 (143.4 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
 Identities = 98/293 (33%), Positives = 145/293 (49%)

Query:   129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDK--VVTNLAAHHNEVHAHE 186
             Y C +C++ +     L  H+R H       + +  +C+ CDK  ++ +   +H  VH   
Sbjct:   326 YHCSKCNKAFSRNSKLLKHQRIHT------RGQPYKCDACDKAFILRSSLINHQVVHTRG 379

Query:   187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLK-SSHNFDFE 245
             + +PC  C K F ++ HL++H R HTGEKPY C  C K F Q SD   HL+  +    F+
Sbjct:   380 KSYPCNECGKMFIKRSHLRLHERIHTGEKPYKCTECGKGFRQWSDIRIHLRIHAGEKPFK 439

Query:   246 SVK-NKTTPLTRYLNKH--LHDAHPEAIKTE------------------RERKLIFKCDL 284
               K  K+   + +L +H  +H    +  K E                    R+  +KC+ 
Sbjct:   440 CSKCGKSFTRSSHLTRHQIIHTGE-KPYKCEVCDKFFSRNSHLAGHWRIHTREKPYKCNE 498

Query:   285 CGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGE--YKKQLLQH-KRLHFPLR 341
             CG   S +  L  H +V+H G        YK    C+ CG+   K   L+H +R+H   R
Sbjct:   499 CGKAFSDRSSLTYH-QVIHTG-----EKSYK----CNECGKAFIKPSYLRHHERIHTGER 548

Query:   342 PYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVH 394
             PY CT+C K F K +HL  H RIHTGEKPY+C  CG+ F Q +D+  H+R +H
Sbjct:   549 PYKCTECGKAFIKLSHLRYHERIHTGEKPYKCTECGKAFQQWSDITIHQR-IH 600

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	405
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	4e-04
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	4e-04
pfam12756	100	pfam12756, zf-C2H2_2, C2H2 type zinc-finger (2 cop	0.001

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 37.0 bits (86), Expect = 4e-04
 Identities = 15/26 (57%), Positives = 19/26 (73%)

Query: 203 HLKVHTRTHTGEKPYACYLCDKRFAQ 228
           +L+ H RTHTGEKPY C +C K F+ 
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 37.0 bits (86), Expect = 4e-04
 Identities = 14/26 (53%), Positives = 19/26 (73%)

Query: 357 HLTTHYRIHTGEKPYQCDICGRGFAQ 382
           +L  H R HTGEKPY+C +CG+ F+ 
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|221755 pfam12756, zf-C2H2_2, C2H2 type zinc-finger (2 copies)

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 16/84 (19%)

Query: 219 CYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTP--LTRYLNKHLHDAHPEAIKTERER 276
           C  C+     + + ++H+  SH F     +       L  YL + +H+ +          
Sbjct: 2   CLFCNHTSDTVEENLEHMFKSHGFFIPEREYLVDLEGLLNYLREKIHEGN---------- 51

Query: 277 KLIFKCDLCGNILSSKHILQEHVR 300
               +C  CG    S   L++H+R
Sbjct: 52  ----ECLYCGKQFKSLEALRQHMR 71

This family contains two copies of a C2H2-like zinc finger domain. Length = 100

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	405
KOG2462|consensus	279		99.93
KOG2462|consensus	279		99.91
KOG3608|consensus	467		99.91
KOG1074|consensus	958		99.91
KOG1074|consensus	958		99.87
KOG3623|consensus	1007		99.87
KOG3608|consensus	467		99.82
KOG3576|consensus	267		99.66
KOG3576|consensus	267		99.59
KOG3623|consensus	1007		99.51
PHA00733	128	hypothetical protein	99.19
PLN03086	567	PRLI-interacting factor K; Provisional	99.18
PLN03086	567	PRLI-interacting factor K; Provisional	99.05
PHA02768	55	hypothetical protein; Provisional	98.91
PHA00733	128	hypothetical protein	98.76
KOG3993|consensus	500		98.68
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.56
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.55
PHA02768	55	hypothetical protein; Provisional	98.52
PHA00616	44	hypothetical protein	98.48
PHA00616	44	hypothetical protein	98.43
KOG3993|consensus	500		98.4
PHA00732	79	hypothetical protein	98.33
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.31
PHA00732	79	hypothetical protein	97.94
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.86
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.78
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.76
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.75
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.72
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.61
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.6
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.48
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.42
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.21
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.11
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.1
KOG2231|consensus	669		96.98
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.93
smart00355	26	ZnF_C2H2 zinc finger.	96.75
KOG2785|consensus	390		96.63
smart00355	26	ZnF_C2H2 zinc finger.	96.6
KOG2231|consensus	669		96.5
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.47
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.45
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.18
PRK04860	160	hypothetical protein; Provisional	96.14
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.03
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.79
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.7
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.4
PRK04860	160	hypothetical protein; Provisional	95.38
KOG2482|consensus	423		95.37
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.24
KOG4173|consensus	253		95.04
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.92
KOG2482|consensus	423		94.78
KOG2893|consensus	341		94.62
KOG1146|consensus	1406		94.51
KOG2785|consensus	390		93.26
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.07
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.99
KOG4173|consensus	253		92.73
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.97
KOG1146|consensus	1406		91.96
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	91.37
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	91.07
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	90.41
KOG2893|consensus	341		89.35
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	89.33
COG4049	65	Uncharacterized protein containing archaeal-type C	87.43
COG4049	65	Uncharacterized protein containing archaeal-type C	86.65
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	86.25
COG5048	467	FOG: Zn-finger [General function prediction only]	86.15
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	84.79
COG5048	467	FOG: Zn-finger [General function prediction only]	83.75
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	82.48
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	82.35
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	80.7
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	80.42

>KOG2462|consensus

Probab=99.93  E-value=7.7e-27  Score=193.94  Aligned_cols=133  Identities=31%  Similarity=0.655  Sum_probs=111.4

Q ss_pred             CcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcccCcchhhhhhhcccceecCCCcccCCChHHH
Q psy359          216 PYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHIL  295 (405)
Q Consensus       216 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l  295 (405)
                      .|+|..|++.+.+.+.|.+|.+.|-..+                                ..+.+.|+.|++.|.+...|
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~H~~~~--------------------------------s~ka~~C~~C~K~YvSmpAL  177 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQTHRSLD--------------------------------SKKAFSCKYCGKVYVSMPAL  177 (279)
T ss_pred             ceeccccccccccccccchhhccccccc--------------------------------ccccccCCCCCceeeehHHH
Confidence            3666666666666666666666643222                                35578899999999999999


Q ss_pred             HHHHhhhccCCCccccccCCCCCcCCCcccc---hHHHHhhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCccc
Q psy359          296 QEHVRVVHMGLSRKYHYEYKPDGVCDVCGEY---KKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQ  372 (405)
Q Consensus       296 ~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~---~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  372 (405)
                      ..|++. |...           +.|.+||+.   .=.|+.|+|+|||||||.|+.|+++|+.++.|+.||+.|.+.+.|+
T Consensus       178 kMHirT-H~l~-----------c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~q  245 (279)
T KOG2462|consen  178 KMHIRT-HTLP-----------CECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQ  245 (279)
T ss_pred             hhHhhc-cCCC-----------cccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCcccc
Confidence            999994 5432           789999997   4489999999999999999999999999999999999999999999


Q ss_pred             CCccccccCChHHHHHHHHh
Q psy359          373 CDICGRGFAQSNDMKKHRRT  392 (405)
Q Consensus       373 C~~C~~~f~~~~~l~~H~~~  392 (405)
                      |..|+|.|...+.|.+|...
T Consensus       246 C~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  246 CPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             CcchhhHHHHHHHHHHhhhh
Confidence            99999999999999999765

>KOG2462|consensus

Probab=99.91  E-value=1.3e-24  Score=180.65  Aligned_cols=141  Identities=30%  Similarity=0.597  Sum_probs=124.1

Q ss_pred             CCcCcccccCCCccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhhcHHHHHHhhccCCCCccCccchhccCChH
Q psy359          123 KTLPLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKL  202 (405)
Q Consensus       123 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~l~~~~~~~h~~~~~~~C~~C~~~f~~~~  202 (405)
                      ......|.|..|++.+.+..+|-+|.++|.....   .+.+.|..|++++.+|...-|.+-+...+..|.+|||.|....
T Consensus       125 ~~~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s---~ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPW  201 (279)
T KOG2462|consen  125 AAKHPRYKCPECGKSYSTSSNLSRHKQTHRSLDS---KKAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPW  201 (279)
T ss_pred             cccCCceeccccccccccccccchhhcccccccc---cccccCCCCCceeeehHHHhhHhhccCCCcccccccccccchH
Confidence            4455679999999999999999999999988654   5678999999999977664444444447899999999999999


Q ss_pred             HHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcccCcchhhhhhhcccceec
Q psy359          203 HLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKC  282 (405)
Q Consensus       203 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~C  282 (405)
                      .|+.|+++|+|+|||.|+.|++.|..++.|+.||++|-                                   +.+.|.|
T Consensus       202 LLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS-----------------------------------~~K~~qC  246 (279)
T KOG2462|consen  202 LLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHS-----------------------------------DVKKHQC  246 (279)
T ss_pred             HhhcccccccCCCCccCCcccchhcchHHHHHHHHhhc-----------------------------------CCccccC
Confidence            99999999999999999999999999999999999965                                   4568999


Q ss_pred             CCCcccCCChHHHHHHHhh
Q psy359          283 DLCGNILSSKHILQEHVRV  301 (405)
Q Consensus       283 ~~C~~~f~~~~~l~~H~~~  301 (405)
                      ..|+++|...+-|.+|...
T Consensus       247 ~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  247 PRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             cchhhHHHHHHHHHHhhhh
Confidence            9999999999999999873

>KOG3608|consensus

Probab=99.91  E-value=2.1e-24  Score=183.84  Aligned_cols=230  Identities=25%  Similarity=0.475  Sum_probs=179.8

Q ss_pred             ccccc--CCCccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhhcHHHHHHhhccCCC-CccCcc--chhccCCh
Q psy359          127 LTYPC--DQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHER-KFPCTF--CEKSFKRK  201 (405)
Q Consensus       127 ~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~l~~~~~~~h~~~~-~~~C~~--C~~~f~~~  201 (405)
                      .-|.|  ..|+..|.+..+|.+|...|.--. ++..                   ...-..++ .+.|.+  |-+.|.++
T Consensus       133 ~~f~C~WedCe~~F~s~~ef~dHV~~H~l~c-eyd~-------------------~~~~~D~~pv~~C~W~~Ct~~~~~k  192 (467)
T KOG3608|consen  133 QNFRCGWEDCEREFVSIVEFQDHVVKHALFC-EYDI-------------------QKTPEDERPVTMCNWAMCTKHMGNK  192 (467)
T ss_pred             hhhccChhhcCCcccCHHHHHHHHHHhhhhh-hhhh-------------------hhCCCCCCceeeccchhhhhhhccH
Confidence            34788  679999999999999998775410 0000                   01111111 244543  77788888


Q ss_pred             HHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCc----ccccCCCCcchHHhhhhhcccCcchhhhhhhcc
Q psy359          202 LHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDF----ESVKNKTTPLTRYLNKHLHDAHPEAIKTERERK  277 (405)
Q Consensus       202 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~----c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~~~~  277 (405)
                      +.|+.|++.|++++..-|+.|+..|.+...|..|++.-.....    |..|.++|.+...|..|+.+-.           
T Consensus       193 ~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv-----------  261 (467)
T KOG3608|consen  193 YRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV-----------  261 (467)
T ss_pred             HHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh-----------
Confidence            8888888888888888888888888888888888876444332    7778888888888877773322           


Q ss_pred             cceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccc---hHHHHhhhhhcCCCCcccccc--ccccc
Q psy359          278 LIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEY---KKQLLQHKRLHFPLRPYACTQ--CDKTF  352 (405)
Q Consensus       278 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~---~~~l~~H~~~h~~~~~~~C~~--C~~~f  352 (405)
                      ..|+|+.|+.+...+++|.+|++.-|...        +| |+|+.|...   .++|..|+.+|. +-.|+|..  |...|
T Consensus       262 n~ykCplCdmtc~~~ssL~~H~r~rHs~d--------kp-fKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~  331 (467)
T KOG3608|consen  262 NCYKCPLCDMTCSSASSLTTHIRYRHSKD--------KP-FKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSV  331 (467)
T ss_pred             hcccccccccCCCChHHHHHHHHhhhccC--------CC-ccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHH
Confidence            35999999999999999999999888764        55 999999886   899999999888 56799988  99999


Q ss_pred             cCchhHHHHhhhhC-CC--CcccCCccccccCChHHHHHHHHhhcccc
Q psy359          353 KKKNHLTTHYRIHT-GE--KPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       353 ~~~~~l~~H~~~h~-~~--~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      .+...|+.|++.++ |.  -+|.|-.|.+.|++..+|..|++..|+-+
T Consensus       332 r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~  379 (467)
T KOG3608|consen  332 RTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFR  379 (467)
T ss_pred             HHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhccc
Confidence            99999999998766 54  46999999999999999999999999986

>KOG1074|consensus

Probab=99.91  E-value=1.4e-24  Score=204.18  Aligned_cols=213  Identities=21%  Similarity=0.374  Sum_probs=154.3

Q ss_pred             CCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCC------ccc---ccCCCCcchHH
Q psy359          187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFD------FES---VKNKTTPLTRY  257 (405)
Q Consensus       187 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~------~c~---~c~~~~~~~~~  257 (405)
                      .+-.|-+|.+....++.|+-|.++|+|++||+|.+|++.|.++..|+.|+-.|-..-      .|+   +|-+.|...-.
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVT  683 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccc
Confidence            569999999999999999999999999999999999999999999999998754322      288   99999998888


Q ss_pred             hhhhhcccCcchhhhh----hhcccceecCCCcccCCChHHHHHHHhhh-------ccCCCcccccc---CCCCCcCCCc
Q psy359          258 LNKHLHDAHPEAIKTE----RERKLIFKCDLCGNILSSKHILQEHVRVV-------HMGLSRKYHYE---YKPDGVCDVC  323 (405)
Q Consensus       258 l~~h~~~~~~~~~~~~----~~~~~~~~C~~C~~~f~~~~~l~~H~~~~-------h~~~~~~~~~~---~~~~~~C~~C  323 (405)
                      |.+|+.......+...    ......-+|..|.+.|.....+..++..+       +..+......+   .-|...+..|
T Consensus       684 lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~  763 (958)
T KOG1074|consen  684 LPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSC  763 (958)
T ss_pred             ccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccccc
Confidence            8888744322222211    22334457999999998888888888743       11110000000   1112334444


Q ss_pred             ccc---hHHHHhhhh-----------------------hcCCCC------------------------------------
Q psy359          324 GEY---KKQLLQHKR-----------------------LHFPLR------------------------------------  341 (405)
Q Consensus       324 ~~~---~~~l~~H~~-----------------------~h~~~~------------------------------------  341 (405)
                      +..   ...+..+-.                       .++.++                                    
T Consensus       764 ~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t  843 (958)
T KOG1074|consen  764 GRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLAT  843 (958)
T ss_pred             ccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccccc
Confidence            432   000000000                       000000                                    


Q ss_pred             -----------------------------------ccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHH
Q psy359          342 -----------------------------------PYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDM  386 (405)
Q Consensus       342 -----------------------------------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  386 (405)
                                                         ...|..|++.|....+|..|++.|.+++||.|.+|++.|+...+|
T Consensus       844 ~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnL  923 (958)
T KOG1074|consen  844 KTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNL  923 (958)
T ss_pred             ccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhh
Confidence                                               189999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccccc
Q psy359          387 KKHRRTVHKAQIH  399 (405)
Q Consensus       387 ~~H~~~~h~~~~~  399 (405)
                      ..||.+|+..+|.
T Consensus       924 KvHMgtH~w~q~~  936 (958)
T KOG1074|consen  924 KVHMGTHMWVQPP  936 (958)
T ss_pred             hhhhccccccCCC
Confidence            9999999998753

>KOG1074|consensus

Probab=99.87  E-value=2.7e-22  Score=188.98  Aligned_cols=211  Identities=22%  Similarity=0.434  Sum_probs=154.8

Q ss_pred             CCCCcCCCchHhhh--cHHHHHHhhccCCCCccCccchhccCChHHHHHHHhhhcCC----CCcccc---cchHhhhChH
Q psy359          160 SKTDRCELCDKVVT--NLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGE----KPYACY---LCDKRFAQIS  230 (405)
Q Consensus       160 ~~~~~C~~C~~~f~--~l~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~---~C~~~f~~~~  230 (405)
                      ..+-+|-+|.+++.  +.+..|.+.|.|++||+|.+|++.|.++.+|+.|+-+|...    ..+.|+   +|.+.|.+..
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V  682 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAV  682 (958)
T ss_pred             CCccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccc
Confidence            34578999999887  66677899999999999999999999999999999887642    458999   9999999999


Q ss_pred             HHHHHHhhhCCC---------------CcccccCCCCcchHHhhhhhcccCcch------hh-hhhhccc----ceecCC
Q psy359          231 DRIKHLKSSHNF---------------DFESVKNKTTPLTRYLNKHLHDAHPEA------IK-TERERKL----IFKCDL  284 (405)
Q Consensus       231 ~l~~H~~~~h~~---------------~~c~~c~~~~~~~~~l~~h~~~~~~~~------~~-~~~~~~~----~~~C~~  284 (405)
                      .|-+|++.|.+.               +.|..|.+.|.....+-.++...-...      +. .+..++.    +..+..
T Consensus       683 ~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~  762 (958)
T KOG1074|consen  683 TLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENS  762 (958)
T ss_pred             cccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCccccc
Confidence            999999997742               238889999988888877774442111      10 1111222    566777


Q ss_pred             CcccCCChHHHHHHHhhh----------------------ccCCCcc---------------------------------
Q psy359          285 CGNILSSKHILQEHVRVV----------------------HMGLSRK---------------------------------  309 (405)
Q Consensus       285 C~~~f~~~~~l~~H~~~~----------------------h~~~~~~---------------------------------  309 (405)
                      |+..+.....+..+-...                      +....+.                                 
T Consensus       763 ~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~  842 (958)
T KOG1074|consen  763 CGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLA  842 (958)
T ss_pred             cccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccccc
Confidence            887776655554442211                      0000000                                 


Q ss_pred             -----cc------------------------ccCCCCCcCCCcccc---hHHHHhhhhhcCCCCccccccccccccCchh
Q psy359          310 -----YH------------------------YEYKPDGVCDVCGEY---KKQLLQHKRLHFPLRPYACTQCDKTFKKKNH  357 (405)
Q Consensus       310 -----~~------------------------~~~~~~~~C~~C~~~---~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  357 (405)
                           .+                        ...+-...|..||+.   .+.|..|+++|+++|||.|.+|+++|..+..
T Consensus       843 t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgn  922 (958)
T KOG1074|consen  843 TKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGN  922 (958)
T ss_pred             cccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhh
Confidence                 00                        000000459999997   8899999999999999999999999999999


Q ss_pred             HHHHhhhhCCCCc
Q psy359          358 LTTHYRIHTGEKP  370 (405)
Q Consensus       358 l~~H~~~h~~~~~  370 (405)
                      |..||..|+...+
T Consensus       923 LKvHMgtH~w~q~  935 (958)
T KOG1074|consen  923 LKVHMGTHMWVQP  935 (958)
T ss_pred             hhhhhccccccCC
Confidence            9999999986543

>KOG3623|consensus

Probab=99.87  E-value=3.5e-22  Score=185.01  Aligned_cols=107  Identities=37%  Similarity=0.636  Sum_probs=92.5

Q ss_pred             ccccCCCccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhh--cHHHHHHhhccC-------------CCCccCc
Q psy359          128 TYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT--NLAAHHNEVHAH-------------ERKFPCT  192 (405)
Q Consensus       128 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~--~l~~~~~~~h~~-------------~~~~~C~  192 (405)
                      ...|++|++.+.....|+.|++..|...    ...|.|..|..+|-  ..+..|+..|..             .+.|+|.
T Consensus       210 lltcpycdrgykrltslkeHikyrhekn----e~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCt  285 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKN----EPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCT  285 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhC----CCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhcccccc
Confidence            4679999999999999999999877755    67899999999998  333334666532             2569999


Q ss_pred             cchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhh
Q psy359          193 FCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKS  238 (405)
Q Consensus       193 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  238 (405)
                      .|+|+|..+..|+.|+++|.|++||.|+.|++.|....++..||-.
T Consensus       286 ECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  286 ECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             ccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            9999999999999999999999999999999999999999999854

>KOG3608|consensus

Probab=99.82  E-value=4.1e-20  Score=157.85  Aligned_cols=204  Identities=26%  Similarity=0.414  Sum_probs=148.1

Q ss_pred             cccc--CCCccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhhcHHHHHHhhccCCCCccCccchhccCChHHHH
Q psy359          128 TYPC--DQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLK  205 (405)
Q Consensus       128 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~l~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~  205 (405)
                      .+.|  ..|.+.|.+++.|+.|++.|.+      +                          +..-|+.|+.-|.+...|-
T Consensus       177 v~~C~W~~Ct~~~~~k~~LreH~r~Hs~------e--------------------------KvvACp~Cg~~F~~~tkl~  224 (467)
T KOG3608|consen  177 VTMCNWAMCTKHMGNKYRLREHIRTHSN------E--------------------------KVVACPHCGELFRTKTKLF  224 (467)
T ss_pred             eeeccchhhhhhhccHHHHHHHHHhcCC------C--------------------------eEEecchHHHHhccccHHH
Confidence            3567  5699999999999999999887      3                          3455666666666666666


Q ss_pred             HHHhhhc--CCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcccCcchhhhhhhcccceecC
Q psy359          206 VHTRTHT--GEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCD  283 (405)
Q Consensus       206 ~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~C~  283 (405)
                      +|++.-+  ...+|+|..|.+.|.++..|..|+..|.....|+.|......++.|..|+...|.        ..++|+|+
T Consensus       225 DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs--------~dkpfKCd  296 (467)
T KOG3608|consen  225 DHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHS--------KDKPFKCD  296 (467)
T ss_pred             HHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhc--------cCCCcccc
Confidence            6654422  2345666666666666666666666666666666666666666666666666663        56799999


Q ss_pred             CCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCC--cccc---hHHHHhhhhhcCC---CCccccccccccccCc
Q psy359          284 LCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDV--CGEY---KKQLLQHKRLHFP---LRPYACTQCDKTFKKK  355 (405)
Q Consensus       284 ~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~--C~~~---~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~  355 (405)
                      .|++.|.+.+.|.+|.. .|.          ++.|+|+.  |-..   ..++.+|++.+++   +-+|.|-.|.+.|++.
T Consensus       297 ~Cd~~c~~esdL~kH~~-~HS----------~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G  365 (467)
T KOG3608|consen  297 ECDTRCVRESDLAKHVQ-VHS----------KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSG  365 (467)
T ss_pred             chhhhhccHHHHHHHHH-hcc----------ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccc
Confidence            99999999999999999 564          34589977  8664   7889999987763   4569999999999999


Q ss_pred             hhHHHHhhhhCC------CCcccCCccccccCC
Q psy359          356 NHLTTHYRIHTG------EKPYQCDICGRGFAQ  382 (405)
Q Consensus       356 ~~l~~H~~~h~~------~~~~~C~~C~~~f~~  382 (405)
                      .+|..|++.-++      -..|.=..|.-.|..
T Consensus       366 ~~L~~HL~kkH~f~~PsGh~RFtYk~~edG~mR  398 (467)
T KOG3608|consen  366 KSLSAHLMKKHGFRLPSGHKRFTYKVDEDGFMR  398 (467)
T ss_pred             hhHHHHHHHhhcccCCCCCCceeeeeccCceee
Confidence            999999865544      234555666666654

>KOG3576|consensus

Probab=99.66  E-value=4.8e-16  Score=123.00  Aligned_cols=125  Identities=31%  Similarity=0.621  Sum_probs=103.5

Q ss_pred             CcccccCCCccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhhcHHHHHHhhccCCCCccCccchhccCChHHHH
Q psy359          126 PLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLK  205 (405)
Q Consensus       126 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~l~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~  205 (405)
                      ...|.|.+|++.|.-...|.+|++-|..                                .+.|-|..||+.|.+..+|+
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~--------------------------------vkr~lct~cgkgfndtfdlk  162 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSD--------------------------------VKRHLCTFCGKGFNDTFDLK  162 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccH--------------------------------HHHHHHhhccCcccchhhhh
Confidence            3457888888888888888888876655                                35689999999999999999


Q ss_pred             HHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcccCcchhhhhhhcccceecCCC
Q psy359          206 VHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLC  285 (405)
Q Consensus       206 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~C~~C  285 (405)
                      +|.++|+|.+||+|..|++.|..+-+|..|++..|+..-                      .-+  -.+...+.|.|..|
T Consensus       163 rh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~----------------------~ya--ykerr~kl~vcedc  218 (267)
T KOG3576|consen  163 RHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQH----------------------QYA--YKERRAKLYVCEDC  218 (267)
T ss_pred             hhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchH----------------------HHH--HHHhhhheeeeccc
Confidence            999999999999999999999999999999998887331                      001  11125678999999


Q ss_pred             cccCCChHHHHHHHhhhccCC
Q psy359          286 GNILSSKHILQEHVRVVHMGL  306 (405)
Q Consensus       286 ~~~f~~~~~l~~H~~~~h~~~  306 (405)
                      |.+-.....+..|+..+|...
T Consensus       219 g~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  219 GYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             CCCCCChhHHHHHHHhcCCCC
Confidence            999999999999999877664

>KOG3576|consensus

Probab=99.59  E-value=1.8e-16  Score=125.32  Aligned_cols=126  Identities=24%  Similarity=0.450  Sum_probs=104.1

Q ss_pred             CCCCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcc
Q psy359          185 HERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHD  264 (405)
Q Consensus       185 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~  264 (405)
                      +...|.|.+|++.|..+..|.+|++-|...+.|-|..|++.|+...+|++|+++|.                        
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rtht------------------------  169 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHT------------------------  169 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhcccc------------------------
Confidence            34679999999999999999999999999999999999999999999999999976                        


Q ss_pred             cCcchhhhhhhcccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccc
Q psy359          265 AHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYA  344 (405)
Q Consensus       265 ~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~  344 (405)
                                 +-+||+|..|++.|..+-+|..|.+.+|+......+-|                        ...+.|.
T Consensus       170 -----------gvrpykc~~c~kaftqrcsleshl~kvhgv~~~yayke------------------------rr~kl~v  214 (267)
T KOG3576|consen  170 -----------GVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKE------------------------RRAKLYV  214 (267)
T ss_pred             -----------CccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHH------------------------hhhheee
Confidence                       46699999999999999999999998887652222111                        1245677


Q ss_pred             cccccccccCchhHHHHhhhhCCCC
Q psy359          345 CTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       345 C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      |..||.+-.....+..|++.|+...
T Consensus       215 cedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  215 CEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             ecccCCCCCChhHHHHHHHhcCCCC
Confidence            7777777777777777777776543

>KOG3623|consensus

Probab=99.51  E-value=5.7e-15  Score=137.76  Aligned_cols=122  Identities=30%  Similarity=0.634  Sum_probs=100.4

Q ss_pred             cccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcccCcchhhhhhhcccceecCCCcccCCChHHHH
Q psy359          217 YACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQ  296 (405)
Q Consensus       217 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~  296 (405)
                      ..|++|.+.+.....|+.|++-.|..                                 .+..|.|..|..+|..+..|.
T Consensus       211 ltcpycdrgykrltslkeHikyrhek---------------------------------ne~nfsC~lCsytFAyRtQLE  257 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEK---------------------------------NEPNFSCMLCSYTFAYRTQLE  257 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhh---------------------------------CCCCCcchhhhhhhhhHHHHH
Confidence            79999999999999999999875531                                 344588999999999999999


Q ss_pred             HHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          297 EHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       297 ~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+..+-.+. +.                     ..++-.-...|.|+|+.|+|+|..+-.|..|+|+|.|++||.|+.|
T Consensus       258 rhm~~hkpg~-dq---------------------a~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnC  315 (1007)
T KOG3623|consen  258 RHMQLHKPGG-DQ---------------------AISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNC  315 (1007)
T ss_pred             HHHHhhcCCC-cc---------------------cccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCccc
Confidence            9999543332 11                     0111122345779999999999999999999999999999999999


Q ss_pred             ccccCChHHHHHHHHhh
Q psy359          377 GRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       377 ~~~f~~~~~l~~H~~~~  393 (405)
                      +|.|...+++..||.++
T Consensus       316 kKRFSHSGSySSHmSSK  332 (1007)
T KOG3623|consen  316 KKRFSHSGSYSSHMSSK  332 (1007)
T ss_pred             ccccccCCccccccccc
Confidence            99999999999998763

>PHA00733 hypothetical protein

Probab=99.19  E-value=1.6e-11  Score=94.47  Aligned_cols=89  Identities=20%  Similarity=0.403  Sum_probs=74.8

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCc
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKK  355 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  355 (405)
                      ..+.+.|.+|.+.|.....|..|.-                             |.+|+.. .+.+||.|+.|++.|.+.
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~-----------------------------l~~~~~~-~~~kPy~C~~Cgk~Fss~   86 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSY-----------------------------LYKLLTS-KAVSPYVCPLCLMPFSSS   86 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHH-----------------------------HHhhccc-CCCCCccCCCCCCcCCCH
Confidence            3567899999999998888777643                             2334333 458899999999999999


Q ss_pred             hhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          356 NHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       356 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ..|..|++.|  ..+|.|+.|++.|.....|..|+..+|+.
T Consensus        87 s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733         87 VSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             HHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcCc
Confidence            9999999976  35799999999999999999999999975

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.18  E-value=8e-11  Score=111.23  Aligned_cols=103  Identities=29%  Similarity=0.623  Sum_probs=85.9

Q ss_pred             cceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccc--hHHHHhhhhhcCCCCccccccccccccC-
Q psy359          278 LIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEY--KKQLLQHKRLHFPLRPYACTQCDKTFKK-  354 (405)
Q Consensus       278 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~--~~~l~~H~~~h~~~~~~~C~~C~~~f~~-  354 (405)
                      ..+.|+.|++.|. ...|..|+...| ..           +.|+ |+..  +..|..|+.+|.+.+++.|.+|++.|.. 
T Consensus       452 ~H~~C~~Cgk~f~-~s~LekH~~~~H-kp-----------v~Cp-Cg~~~~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g  517 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEKHMKVFH-EP-----------LQCP-CGVVLEKEQMVQHQASTCPLRLITCRFCGDMVQAG  517 (567)
T ss_pred             cCccCCCCCCccc-hHHHHHHHHhcC-CC-----------ccCC-CCCCcchhHHHhhhhccCCCCceeCCCCCCccccC
Confidence            3468999999996 678999999765 22           7899 9865  8899999999999999999999999952 


Q ss_pred             ---------chhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          355 ---------KNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       355 ---------~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                               ...|..|.... |.+++.|..|++.|. ...|..|+...|+.
T Consensus       518 ~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vr-lrdm~~H~~~~h~~  566 (567)
T PLN03086        518 GSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVM-LKEMDIHQIAVHQK  566 (567)
T ss_pred             ccccchhhhhhhHHHHHHhc-CCcceEccccCCeee-ehhHHHHHHHhhcC
Confidence                     35799998885 889999999998866 56788999887763

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.05  E-value=2.9e-10  Score=107.50  Aligned_cols=102  Identities=20%  Similarity=0.480  Sum_probs=84.4

Q ss_pred             ceecCC--CcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccc--hHHHHhhhhhcCCCCccccccccccccC
Q psy359          279 IFKCDL--CGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEY--KKQLLQHKRLHFPLRPYACTQCDKTFKK  354 (405)
Q Consensus       279 ~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~--~~~l~~H~~~h~~~~~~~C~~C~~~f~~  354 (405)
                      ...|+.  |+..|.. ..|..|                   +.|+.|++.  .+.|..|+.+++  ++|.|+ |++.+ .
T Consensus       433 ~V~Cp~~~Cg~v~~r-~el~~H-------------------~~C~~Cgk~f~~s~LekH~~~~H--kpv~Cp-Cg~~~-~  488 (567)
T PLN03086        433 NVVCPHDGCGIVLRV-EEAKNH-------------------VHCEKCGQAFQQGEMEKHMKVFH--EPLQCP-CGVVL-E  488 (567)
T ss_pred             ceeCCcccccceeec-cccccC-------------------ccCCCCCCccchHHHHHHHHhcC--CCccCC-CCCCc-c
Confidence            356874  9998843 333433                   459999886  788999999986  789999 99765 6


Q ss_pred             chhHHHHhhhhCCCCcccCCccccccCC----------hHHHHHHHHhhccccccccccCC
Q psy359          355 KNHLTTHYRIHTGEKPYQCDICGRGFAQ----------SNDMKKHRRTVHKAQIHAVEDKG  405 (405)
Q Consensus       355 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~----------~~~l~~H~~~~h~~~~~~~~~~~  405 (405)
                      +..|..|+..|.+++++.|.+|++.|..          ...|..|..+ .|.+++.|..||
T Consensus       489 R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~-CG~rt~~C~~Cg  548 (567)
T PLN03086        489 KEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI-CGSRTAPCDSCG  548 (567)
T ss_pred             hhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHh-cCCcceEccccC
Confidence            6899999999999999999999999952          4589999988 599999999997

>PHA02768 hypothetical protein; Provisional

Probab=98.91  E-value=5.1e-10  Score=70.30  Aligned_cols=45  Identities=22%  Similarity=0.489  Sum_probs=41.2

Q ss_pred             ccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHH
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKK  388 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  388 (405)
                      .|+|+.||+.|.....|..|++.|.  ++|+|..|++.|.+.+.|..
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~~   49 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYIE   49 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeEE
Confidence            3899999999999999999999999  79999999999998887753

>PHA00733 hypothetical protein

Probab=98.76  E-value=7.6e-09  Score=79.72  Aligned_cols=82  Identities=18%  Similarity=0.315  Sum_probs=63.8

Q ss_pred             CCCccCccchhccCChHHHHHH--Hh---hhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhh
Q psy359          186 ERKFPCTFCEKSFKRKLHLKVH--TR---THTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNK  260 (405)
Q Consensus       186 ~~~~~C~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~  260 (405)
                      .+++.|.+|.+.|.....|..+  +.   .+++.+||.|..|++.|.+...|..|++.+                     
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h---------------------   96 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT---------------------   96 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC---------------------
Confidence            3568888888888877766665  21   234578899999999999999999998752                     


Q ss_pred             hhcccCcchhhhhhhcccceecCCCcccCCChHHHHHHHhhhcc
Q psy359          261 HLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHM  304 (405)
Q Consensus       261 h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  304 (405)
                                      +.+|.|..|++.|.....|..|+...|.
T Consensus        97 ----------------~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         97 ----------------EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             ----------------CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence                            1248899999999999999999987664

>KOG3993|consensus

Probab=98.68  E-value=3.4e-09  Score=93.88  Aligned_cols=203  Identities=15%  Similarity=0.182  Sum_probs=125.1

Q ss_pred             CccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCC----CcchHHhhhhhc
Q psy359          188 KFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKT----TPLTRYLNKHLH  263 (405)
Q Consensus       188 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~----~~~~~~l~~h~~  263 (405)
                      -|+|.+|...|.+...|.+|.-......-|+|+.|++.|+....|..|.+.|-....-...+-.    ......+.+.-.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            4999999999999999999954333333499999999999999999999986542211100000    000111111110


Q ss_pred             ccCcchhhhhhhcccceecCCCcccCCChHHHHHHHhhhccCCCccc-----cccC-CC-CCcCCCcccchHH---HHhh
Q psy359          264 DAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKY-----HYEY-KP-DGVCDVCGEYKKQ---LLQH  333 (405)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~-----~~~~-~~-~~~C~~C~~~~~~---l~~H  333 (405)
                      +   .+.  + +....|.|.+|+++|....-|+.|+..+|.......     ..+. .+ .+-|+.+.-..+.   -..+
T Consensus       347 r---sg~--d-ss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~  420 (500)
T KOG3993|consen  347 R---SGD--D-SSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDE  420 (500)
T ss_pred             c---cCC--c-ccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccc
Confidence            1   111  1 234489999999999999999999987776654331     1110 11 1234444433111   0111


Q ss_pred             hhhcCC-CCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          334 KRLHFP-LRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       334 ~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      +.-+.+ .....|++|+..+.++..=--+.+....+..|.|.+|.-.|.+...|.+|+..-|..
T Consensus       421 vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hps  484 (500)
T KOG3993|consen  421 VLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPS  484 (500)
T ss_pred             eeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChH
Confidence            111111 122577888877777665555555455566799999999999999999998887754

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.56  E-value=4.3e-08  Score=52.57  Aligned_cols=24  Identities=58%  Similarity=1.272  Sum_probs=13.5

Q ss_pred             HHHHhhhhCCCCcccCCccccccC
Q psy359          358 LTTHYRIHTGEKPYQCDICGRGFA  381 (405)
Q Consensus       358 l~~H~~~h~~~~~~~C~~C~~~f~  381 (405)
                      |..|++.|.+++||+|++|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            455555555555555555555554

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.55  E-value=3.4e-08  Score=52.96  Aligned_cols=26  Identities=38%  Similarity=0.810  Sum_probs=23.6

Q ss_pred             HHHhhhhhcCCCCccccccccccccC
Q psy359          329 QLLQHKRLHFPLRPYACTQCDKTFKK  354 (405)
Q Consensus       329 ~l~~H~~~h~~~~~~~C~~C~~~f~~  354 (405)
                      +|.+|+++|++++||+|++|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47889999999999999999999974

...

>PHA02768 hypothetical protein; Provisional

Probab=98.52  E-value=3.4e-08  Score=62.15  Aligned_cols=43  Identities=14%  Similarity=0.403  Sum_probs=38.2

Q ss_pred             CccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHH
Q psy359          188 KFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDR  232 (405)
Q Consensus       188 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  232 (405)
                      .|.|+.|++.|.....|..|+++|+  ++|+|..|++.|...+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            4899999999999999999999998  689999999999865544

>PHA00616 hypothetical protein

Probab=98.48  E-value=6e-08  Score=57.88  Aligned_cols=34  Identities=21%  Similarity=0.454  Sum_probs=18.5

Q ss_pred             ccccccccccccCchhHHHHhhhhCCCCcccCCc
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI  375 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  375 (405)
                      ||+|+.||+.|.+.+.|..|++.|+|++++.|++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            3555555555555555555555555555555543

>PHA00616 hypothetical protein

Probab=98.43  E-value=7.7e-08  Score=57.42  Aligned_cols=33  Identities=33%  Similarity=0.568  Sum_probs=30.8

Q ss_pred             cccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      ||+|+.||+.|.+.++|.+|++.||+++++-|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            699999999999999999999999999987764

>KOG3993|consensus

Probab=98.40  E-value=8.5e-08  Score=85.23  Aligned_cols=110  Identities=23%  Similarity=0.423  Sum_probs=63.2

Q ss_pred             ccccCCCccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhh---cHHHHHHhhccCCCC-ccCcc--chhccCCh
Q psy359          128 TYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAHERK-FPCTF--CEKSFKRK  201 (405)
Q Consensus       128 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~---~l~~~~~~~h~~~~~-~~C~~--C~~~f~~~  201 (405)
                      .|.|..|...|.+-..|..|.-....      -..|.|++|+++|+   +|..| +++|.-... -+-..  =.+...+.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV------~vEYrCPEC~KVFsCPANLASH-RRWHKPR~eaa~a~~~P~k~~~~~r  339 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIV------HVEYRCPECDKVFSCPANLASH-RRWHKPRPEAAKAGSPPPKQAVETR  339 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeE------EeeecCCcccccccCchhhhhh-hcccCCchhhhhcCCCChhhhhhhh
Confidence            48899999999999999888654333      34577777777776   45544 555532110 00000  00000000


Q ss_pred             HHHHHHHhh--hcCCCCcccccchHhhhChHHHHHHHhhhCCCCc
Q psy359          202 LHLKVHTRT--HTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDF  244 (405)
Q Consensus       202 ~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  244 (405)
                      ...+.--+.  ...+..|.|.+|++.|.....|+.|+..|+....
T Consensus       340 ae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~  384 (500)
T KOG3993|consen  340 AEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPL  384 (500)
T ss_pred             hhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhcccc
Confidence            000000000  0112359999999999999999999999886554

>PHA00732 hypothetical protein

Probab=98.33  E-value=2.6e-07  Score=64.29  Aligned_cols=46  Identities=24%  Similarity=0.495  Sum_probs=38.7

Q ss_pred             ccccccccccccCchhHHHHhhh-hCCCCcccCCccccccCChHHHHHHHHhh
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRI-HTGEKPYQCDICGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  393 (405)
                      ||.|..|++.|.+...|..|++. |.   ++.|+.|++.|.   .|..|++++
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhccc
Confidence            58999999999999999999985 54   358999999998   577888553

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.31  E-value=8e-07  Score=57.41  Aligned_cols=50  Identities=22%  Similarity=0.515  Sum_probs=41.2

Q ss_pred             cccccccccccCchhHHHHhhhhC-C-CCcccCCccccccCChHHHHHHHHhhcc
Q psy359          343 YACTQCDKTFKKKNHLTTHYRIHT-G-EKPYQCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       343 ~~C~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      |.|++|++ ..+...|..|+...| . .+.+.|++|...+.  .+|..|+..+|+
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            89999999 666789999986554 3 35699999998765  599999999885

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=97.94  E-value=7.2e-06  Score=57.08  Aligned_cols=49  Identities=29%  Similarity=0.679  Sum_probs=36.7

Q ss_pred             ceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCchhH
Q psy359          279 IFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHL  358 (405)
Q Consensus       279 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  358 (405)
                      +|.|..|++.|.+.+.|..|++..|.                                     ++.|+.|++.|.   .|
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~-------------------------------------~~~C~~CgKsF~---~l   40 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT-------------------------------------LTKCPVCNKSYR---RL   40 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC-------------------------------------CCccCCCCCEeC---Ch
Confidence            47899999999999999999874332                                     246888888887   46


Q ss_pred             HHHhhhhCC
Q psy359          359 TTHYRIHTG  367 (405)
Q Consensus       359 ~~H~~~h~~  367 (405)
                      ..|+....+
T Consensus        41 ~~H~~~~~~   49 (79)
T PHA00732         41 NQHFYSQYD   49 (79)
T ss_pred             hhhhcccCC
Confidence            777765544

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.86  E-value=1e-05  Score=42.08  Aligned_cols=22  Identities=41%  Similarity=1.124  Sum_probs=15.1

Q ss_pred             ccCCccccccCChHHHHHHHHh
Q psy359          371 YQCDICGRGFAQSNDMKKHRRT  392 (405)
Q Consensus       371 ~~C~~C~~~f~~~~~l~~H~~~  392 (405)
                      |+|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5667777777777777777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.78  E-value=1.8e-05  Score=41.56  Aligned_cols=24  Identities=42%  Similarity=1.063  Sum_probs=16.1

Q ss_pred             ccCCccccccCChHHHHHHHHhhc
Q psy359          371 YQCDICGRGFAQSNDMKKHRRTVH  394 (405)
Q Consensus       371 ~~C~~C~~~f~~~~~l~~H~~~~h  394 (405)
                      |.|++|++.|.+...|..|+.++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567777777777777777777765

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.76  E-value=1.3e-05  Score=41.58  Aligned_cols=23  Identities=43%  Similarity=0.925  Sum_probs=21.5

Q ss_pred             cccccccccccCchhHHHHhhhh
Q psy359          343 YACTQCDKTFKKKNHLTTHYRIH  365 (405)
Q Consensus       343 ~~C~~C~~~f~~~~~l~~H~~~h  365 (405)
                      |+|++|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.75  E-value=5.1e-05  Score=48.96  Aligned_cols=53  Identities=25%  Similarity=0.432  Sum_probs=37.5

Q ss_pred             ceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCchhH
Q psy359          279 IFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHL  358 (405)
Q Consensus       279 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  358 (405)
                      .|.|+.|++ ..+...|..|....|...                                 .+.+.|++|...+..  .|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~---------------------------------~~~v~CPiC~~~~~~--~l   45 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSE---------------------------------SKNVVCPICSSRVTD--NL   45 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCC---------------------------------CCCccCCCchhhhhh--HH
Confidence            378999999 455678888888777553                                 234778888776553  78


Q ss_pred             HHHhhhhCC
Q psy359          359 TTHYRIHTG  367 (405)
Q Consensus       359 ~~H~~~h~~  367 (405)
                      ..|+..+|+
T Consensus        46 ~~Hl~~~H~   54 (54)
T PF05605_consen   46 IRHLNSQHR   54 (54)
T ss_pred             HHHHHHhcC
Confidence            888776653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.72  E-value=1.9e-05  Score=58.70  Aligned_cols=54  Identities=26%  Similarity=0.710  Sum_probs=23.3

Q ss_pred             ccccccccccCchhHHHHhhhhCC-----------------------CCcccCCccccccCChHHHHHHHHhh-cccc
Q psy359          344 ACTQCDKTFKKKNHLTTHYRIHTG-----------------------EKPYQCDICGRGFAQSNDMKKHRRTV-HKAQ  397 (405)
Q Consensus       344 ~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~~~f~~~~~l~~H~~~~-h~~~  397 (405)
                      +|.+|+..|.+...|..|+...|+                       ...+.|.+|++.|.+...|..|++.+ |...
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~H~~~   78 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSKHHKKR   78 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTTTTC-
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCccCCCc
Confidence            466666666666666666654332                       12589999999999999999999985 5443

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.61  E-value=3e-05  Score=57.62  Aligned_cols=73  Identities=25%  Similarity=0.366  Sum_probs=21.8

Q ss_pred             ecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCchhHHH
Q psy359          281 KCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTT  360 (405)
Q Consensus       281 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  360 (405)
                      .|..|+..|.+...|..|+...|...-+..           .--.....+..++..-. ...+.|.+|++.|.+...|..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~-----------~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~   68 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQ-----------KYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQE   68 (100)
T ss_dssp             ------------------------------------------------------------SSEEBSSSS-EESSHHHHHH
T ss_pred             Cccccccccccccccccccccccccccccc-----------ccccccccccccccccc-CCCCCCCccCCCCcCHHHHHH
Confidence            488999999999999999988886541100           00001222333332221 226999999999999999999


Q ss_pred             Hhhhh
Q psy359          361 HYRIH  365 (405)
Q Consensus       361 H~~~h  365 (405)
                      ||+.+
T Consensus        69 Hm~~~   73 (100)
T PF12756_consen   69 HMRSK   73 (100)
T ss_dssp             HHHHT
T ss_pred             HHcCc
Confidence            99865

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.60  E-value=2.7e-05  Score=42.22  Aligned_cols=26  Identities=31%  Similarity=0.933  Sum_probs=15.4

Q ss_pred             cccCCccccccCChHHHHHHHHhhcc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      +|+|..|++.|.+...|..|++.|++
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            35566666666666666666655543

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.48  E-value=6.2e-05  Score=39.39  Aligned_cols=24  Identities=38%  Similarity=0.897  Sum_probs=20.4

Q ss_pred             cccccccccccCchhHHHHhhhhC
Q psy359          343 YACTQCDKTFKKKNHLTTHYRIHT  366 (405)
Q Consensus       343 ~~C~~C~~~f~~~~~l~~H~~~h~  366 (405)
                      |.|++|++.|.+...|..|+..|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999998875

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.42  E-value=7.3e-05  Score=40.49  Aligned_cols=26  Identities=38%  Similarity=0.830  Sum_probs=23.8

Q ss_pred             ccccccccccccCchhHHHHhhhhCC
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~h~~  367 (405)
                      ||+|..|++.|.+...|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            58999999999999999999988764

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.21  E-value=0.00028  Score=43.15  Aligned_cols=42  Identities=26%  Similarity=0.454  Sum_probs=26.3

Q ss_pred             hHHHHhhhh-CCCCcccCCccccccCChHHHHHHHHhhccccc
Q psy359          357 HLTTHYRIH-TGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQI  398 (405)
Q Consensus       357 ~l~~H~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  398 (405)
                      .+..+.+.+ ..+.|..|++|+..+.+..+|+.|+...|+.+|
T Consensus        10 ~~~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   10 PSTKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S-----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhhhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            345555444 356789999999999999999999999999886

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.11  E-value=0.00022  Score=61.57  Aligned_cols=72  Identities=26%  Similarity=0.460  Sum_probs=48.4

Q ss_pred             cccceecCC--CcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCcccccccccccc
Q psy359          276 RKLIFKCDL--CGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFK  353 (405)
Q Consensus       276 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  353 (405)
                      ++++|+|++  |.+++.....|+-|+.-.|...  ......-|              ..|..--...|||+|.+|+|.|+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~--~~~~~p~p--------------~~~~~F~~~~KPYrCevC~KRYK  409 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQ--KLHENPSP--------------EKMNIFSAKDKPYRCEVCDKRYK  409 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCc--ccCCCCCc--------------cccccccccCCceeccccchhhc
Confidence            358999986  9999999999999998555221  11100001              11222234568899999999999


Q ss_pred             CchhHHHHhh
Q psy359          354 KKNHLTTHYR  363 (405)
Q Consensus       354 ~~~~l~~H~~  363 (405)
                      +...|.-|..
T Consensus       410 NlNGLKYHr~  419 (423)
T COG5189         410 NLNGLKYHRK  419 (423)
T ss_pred             cCccceeccc
Confidence            8888887753

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.10  E-value=0.00014  Score=62.73  Aligned_cols=53  Identities=36%  Similarity=0.860  Sum_probs=45.6

Q ss_pred             CCCcccccc--ccccccCchhHHHHhh-hhC------------------CCCcccCCccccccCChHHHHHHHH
Q psy359          339 PLRPYACTQ--CDKTFKKKNHLTTHYR-IHT------------------GEKPYQCDICGRGFAQSNDMKKHRR  391 (405)
Q Consensus       339 ~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~------------------~~~~~~C~~C~~~f~~~~~l~~H~~  391 (405)
                      ++|||+|++  |.|+|++...|.-|+. .|.                  ..+||+|++|+|.+.+..-|..|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            359999998  9999999999999986 441                  2479999999999999999988854

>KOG2231|consensus

Probab=96.98  E-value=0.0018  Score=62.94  Aligned_cols=81  Identities=21%  Similarity=0.387  Sum_probs=43.8

Q ss_pred             ccccchHhhhChHHHHHHHhhhCCCCcccccCCCC---------cchHHhhhhhcccCcchhhhhhhcccceecCCCccc
Q psy359          218 ACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTT---------PLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNI  288 (405)
Q Consensus       218 ~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~---------~~~~~l~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~  288 (405)
                      .|..| ..|.+...|++|+..-|+...|..|-...         -+...|+.|++..-++    +.+....-.|..|...
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d----~~s~rGhp~C~~C~~~  191 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPD----DESCRGHPLCKFCHER  191 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhhhhccccccccceeeeeeeehehHHHHHHHHhcCCCc----cccccCCccchhhhhh
Confidence            34455 45555555555555555555544442221         1233455555444331    0111113468889999


Q ss_pred             CCChHHHHHHHhhhc
Q psy359          289 LSSKHILQEHVRVVH  303 (405)
Q Consensus       289 f~~~~~l~~H~~~~h  303 (405)
                      |-....|..|++..|
T Consensus       192 fld~~el~rH~~~~h  206 (669)
T KOG2231|consen  192 FLDDDELYRHLRFDH  206 (669)
T ss_pred             hccHHHHHHhhccce
Confidence            999999998888655

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.93  E-value=0.00071  Score=35.35  Aligned_cols=24  Identities=25%  Similarity=0.679  Sum_probs=16.2

Q ss_pred             ccCCccccccCChHHHHHHHHhhcc
Q psy359          371 YQCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       371 ~~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      |+|+.|+.... ...|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            56777777776 7777777777764

>smart00355 ZnF_C2H2 zinc finger

Probab=96.75  E-value=0.0012  Score=34.93  Aligned_cols=23  Identities=39%  Similarity=0.856  Sum_probs=18.2

Q ss_pred             ccCCccccccCChHHHHHHHHhh
Q psy359          371 YQCDICGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       371 ~~C~~C~~~f~~~~~l~~H~~~~  393 (405)
                      |+|..|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            57888888888888888888754

>KOG2785|consensus

Probab=96.63  E-value=0.0066  Score=54.39  Aligned_cols=54  Identities=28%  Similarity=0.464  Sum_probs=46.1

Q ss_pred             CCCccccccccccccCchhHHHHhhhhCCC-----------------------CcccCCccc---cccCChHHHHHHHHh
Q psy359          339 PLRPYACTQCDKTFKKKNHLTTHYRIHTGE-----------------------KPYQCDICG---RGFAQSNDMKKHRRT  392 (405)
Q Consensus       339 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~~  392 (405)
                      ...|-.|.+|++.|.+...-..||..+||-                       ..+-|-.|+   +.|.+..+.+.||..
T Consensus       163 e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  163 ELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             ccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            345688999999999999999999888862                       148899999   999999999999987

>smart00355 ZnF_C2H2 zinc finger

Probab=96.60  E-value=0.0015  Score=34.61  Aligned_cols=24  Identities=46%  Similarity=0.905  Sum_probs=21.8

Q ss_pred             cccccccccccCchhHHHHhhhhC
Q psy359          343 YACTQCDKTFKKKNHLTTHYRIHT  366 (405)
Q Consensus       343 ~~C~~C~~~f~~~~~l~~H~~~h~  366 (405)
                      |+|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999998765

>KOG2231|consensus

Probab=96.50  E-value=0.0047  Score=60.17  Aligned_cols=101  Identities=24%  Similarity=0.426  Sum_probs=78.0

Q ss_pred             ecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccc------------hHHHHhhhhhcCC-CC---c-c
Q psy359          281 KCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEY------------KKQLLQHKRLHFP-LR---P-Y  343 (405)
Q Consensus       281 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~------------~~~l~~H~~~h~~-~~---~-~  343 (405)
                      .|..| ..|.+-..|+.|+...|..            +.|..|...            ...|.+|+..-.. ++   . -
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~~------------~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp  183 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHKL------------HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHP  183 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhhh------------hccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCc
Confidence            57788 7788999999999877766            567777542            7788888765543 22   2 5


Q ss_pred             ccccccccccCchhHHHHhhhhCCCCcccCCcc------ccccCChHHHHHHHHhhccccc
Q psy359          344 ACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC------GRGFAQSNDMKKHRRTVHKAQI  398 (405)
Q Consensus       344 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~~h~~~~  398 (405)
                      .|..|...|.....|..|++.++    |.|-+|      +..|..-..|..|.+..|-.-.
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~HflCE  240 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHFLCE  240 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcCcccc
Confidence            89999999999999999988766    566666      5677888999999999886543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.47  E-value=0.0014  Score=34.52  Aligned_cols=22  Identities=36%  Similarity=1.035  Sum_probs=15.4

Q ss_pred             ccCCccccccCChHHHHHHHHh
Q psy359          371 YQCDICGRGFAQSNDMKKHRRT  392 (405)
Q Consensus       371 ~~C~~C~~~f~~~~~l~~H~~~  392 (405)
                      |.|.+|++.|.+...|+.|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4577777777777777777655

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.45  E-value=0.0054  Score=53.82  Aligned_cols=82  Identities=23%  Similarity=0.306  Sum_probs=58.2

Q ss_pred             ccccc--chHhhhChHHHHHHHhhhCCCCcccccCCC---Cc------chHHhhhhhcccCcchhhhhhhcccceecCCC
Q psy359          217 YACYL--CDKRFAQISDRIKHLKSSHNFDFESVKNKT---TP------LTRYLNKHLHDAHPEAIKTERERKLIFKCDLC  285 (405)
Q Consensus       217 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~---~~------~~~~l~~h~~~~~~~~~~~~~~~~~~~~C~~C  285 (405)
                      |.|+.  |.........|..|.+..|+.-.|.+|-..   |.      ....|++|......++     .-+..=.|..|
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~-----GFKGHP~C~FC  226 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEE-----GFKGHPLCIFC  226 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhcCcccCccceeeeecccccccccCCcccc-----CcCCCchhhhc
Confidence            78864  777777778899999999998888888433   22      2456777764333221     11222359999


Q ss_pred             cccCCChHHHHHHHhhhc
Q psy359          286 GNILSSKHILQEHVRVVH  303 (405)
Q Consensus       286 ~~~f~~~~~l~~H~~~~h  303 (405)
                      ...|-...+|..|++..|
T Consensus       227 ~~~FYdDDEL~~HcR~~H  244 (493)
T COG5236         227 KIYFYDDDELRRHCRLRH  244 (493)
T ss_pred             cceecChHHHHHHHHhhh
Confidence            999999999999999766

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.18  E-value=0.0042  Score=32.36  Aligned_cols=24  Identities=29%  Similarity=0.580  Sum_probs=19.6

Q ss_pred             cccCCCccccCChhhHHHHHHhhcC
Q psy359          129 YPCDQCDRTYQTKKSLYVHRRAHLG  153 (405)
Q Consensus       129 ~~C~~C~~~f~~~~~l~~H~~~h~~  153 (405)
                      |+|+.|++... ...|..|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            68999999998 9999999998764

>PRK04860 hypothetical protein; Provisional

Probab=96.14  E-value=0.0025  Score=51.10  Aligned_cols=38  Identities=32%  Similarity=0.820  Sum_probs=28.5

Q ss_pred             ccccccccccccCchhHHHHhhhhCCCCcccCCccccccCCh
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQS  383 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  383 (405)
                      +|.|. |+.   ....+..|.++|.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            57887 776   666677888888888888888888777644

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.03  E-value=0.0034  Score=33.07  Aligned_cols=23  Identities=35%  Similarity=0.814  Sum_probs=21.0

Q ss_pred             cccccccccccCchhHHHHhhhh
Q psy359          343 YACTQCDKTFKKKNHLTTHYRIH  365 (405)
Q Consensus       343 ~~C~~C~~~f~~~~~l~~H~~~h  365 (405)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999999764

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.79  E-value=0.0086  Score=52.61  Aligned_cols=88  Identities=24%  Similarity=0.408  Sum_probs=52.3

Q ss_pred             ccccCC--CccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhhcHHHHHHhhccCCCCccCccchhccCChHHHH
Q psy359          128 TYPCDQ--CDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLK  205 (405)
Q Consensus       128 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~l~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~  205 (405)
                      .|.|+.  |..++.....|..|.+..|+        .+.|.+|-.              ..+.|.   |.-..-++..|+
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~--------~~~C~~C~~--------------nKk~F~---~E~~lF~~~~Lr  205 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG--------FVLCSECIG--------------NKKDFW---NEIRLFRSSTLR  205 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC--------cEEhHhhhc--------------CcccCc---cceeeeeccccc
Confidence            477865  78888888888888887665        234444422              011122   222233345566


Q ss_pred             HHHhhhcCCCC----cccccchHhhhChHHHHHHHhhhC
Q psy359          206 VHTRTHTGEKP----YACYLCDKRFAQISDRIKHLKSSH  240 (405)
Q Consensus       206 ~H~~~h~~~~~----~~C~~C~~~f~~~~~l~~H~~~~h  240 (405)
                      .|...-..+..    =.|..|...|-+-..|..|++..|
T Consensus       206 ~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~H  244 (493)
T COG5236         206 DHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRH  244 (493)
T ss_pred             ccccCCccccCcCCCchhhhccceecChHHHHHHHHhhh
Confidence            66544222211    268888888888888888888755

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.70  E-value=0.012  Score=36.21  Aligned_cols=31  Identities=23%  Similarity=0.483  Sum_probs=17.3

Q ss_pred             CCCccCccchhccCChHHHHHHHhhhcCCCC
Q psy359          186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKP  216 (405)
Q Consensus       186 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  216 (405)
                      +.|-.|++|+..+....+|++|+.++|+.+|
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3466777777777777777777777666543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.40  E-value=0.0037  Score=33.65  Aligned_cols=22  Identities=32%  Similarity=0.883  Sum_probs=14.2

Q ss_pred             ccCCccccccCChHHHHHHHHh
Q psy359          371 YQCDICGRGFAQSNDMKKHRRT  392 (405)
Q Consensus       371 ~~C~~C~~~f~~~~~l~~H~~~  392 (405)
                      |-|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4566666666666666666554

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=95.38  E-value=0.0061  Score=48.89  Aligned_cols=38  Identities=26%  Similarity=0.488  Sum_probs=28.3

Q ss_pred             CcCCCcccchHHHHhhhhhcCCCCccccccccccccCch
Q psy359          318 GVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKN  356 (405)
Q Consensus       318 ~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  356 (405)
                      |.|. |+.....+.+|.++|+++++|+|..|+..|....
T Consensus       120 Y~C~-C~~~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        120 YRCK-CQEHQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEcC-CCCeeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            4444 4444445667888899999999999999987654

>KOG2482|consensus

Probab=95.37  E-value=0.03  Score=49.27  Aligned_cols=147  Identities=22%  Similarity=0.397  Sum_probs=86.7

Q ss_pred             ccccCCCcccc-CChhhHHHHHHhhcCcccccCCCCCcCCCchHhhh-cHHHHHHhhccCCCCccCccchhccCChHHHH
Q psy359          128 TYPCDQCDRTY-QTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT-NLAAHHNEVHAHERKFPCTFCEKSFKRKLHLK  205 (405)
Q Consensus       128 ~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~-~l~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~  205 (405)
                      ...|-.|...+ -+++.+..|+-..|+.+.-.+..        .++. .+..+..+.   -..+.|-.|.+.|+.+..|+
T Consensus       144 slqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDn--------iVyvnelLehLkek---L~r~~CLyCekifrdkntLk  212 (423)
T KOG2482|consen  144 SLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDN--------IVYVNELLEHLKEK---LERLRCLYCEKIFRDKNTLK  212 (423)
T ss_pred             eeEEEEecchhcccHHHHHHHHHHHhhhccCCCcc--------eeeHHHHHHHHHHH---HhhheeeeeccccCCcHHHH
Confidence            35688887776 56677777876655532211111        1111 222221111   12378888999999988899


Q ss_pred             HHHhh--hcCC----------------------------------------------------CC--cccccchHhhhCh
Q psy359          206 VHTRT--HTGE----------------------------------------------------KP--YACYLCDKRFAQI  229 (405)
Q Consensus       206 ~H~~~--h~~~----------------------------------------------------~~--~~C~~C~~~f~~~  229 (405)
                      .||+.  |..-                                                    .+  ..|.-|.....+.
T Consensus       213 eHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~  292 (423)
T KOG2482|consen  213 EHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENP  292 (423)
T ss_pred             HHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhH
Confidence            88754  3210                                                    11  4788888888888


Q ss_pred             HHHHHHHhhhCCCCcccccCC---CC----cchHHhhhhhcccCcchhhhhhhcccceecCCCcccCCChHHHHHHHh
Q psy359          230 SDRIKHLKSSHNFDFESVKNK---TT----PLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVR  300 (405)
Q Consensus       230 ~~l~~H~~~~h~~~~c~~c~~---~~----~~~~~l~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  300 (405)
                      ..|..||+..|..+.-.+-..   .|    +.-.+++.               ......|-.|.-.|-.+..|..|+.
T Consensus       293 ~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRk---------------q~~~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  293 VFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRK---------------QKKKSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             HHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHH---------------HhhccccccccccccCcchhhhhcc
Confidence            888888888886553211111   00    00011111               1234578999999999999999986

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.24  E-value=0.017  Score=30.39  Aligned_cols=21  Identities=38%  Similarity=0.966  Sum_probs=14.8

Q ss_pred             ccCCccccccCChHHHHHHHHh
Q psy359          371 YQCDICGRGFAQSNDMKKHRRT  392 (405)
Q Consensus       371 ~~C~~C~~~f~~~~~l~~H~~~  392 (405)
                      .+|+.||+.| .+..|..|+..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4677888887 66777777653

>KOG4173|consensus

Probab=95.04  E-value=0.018  Score=46.77  Aligned_cols=80  Identities=24%  Similarity=0.567  Sum_probs=63.2

Q ss_pred             cccccCC--CccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhhcHHHHHHhhccCCCCccCccchhccCChHHH
Q psy359          127 LTYPCDQ--CDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHL  204 (405)
Q Consensus       127 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~l~~~~~~~h~~~~~~~C~~C~~~f~~~~~l  204 (405)
                      ..|.|.+  |...|.+...+..|-.+-|+                                   -.|..|.+.|++...|
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~-----------------------------------~sCs~C~r~~Pt~hLL  122 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG-----------------------------------NSCSFCKRAFPTGHLL  122 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc-----------------------------------chhHHHHHhCCchhhh
Confidence            4477865  88888888888777766555                                   3799999999999999


Q ss_pred             HHHHhhhc----------CCCCcccc--cchHhhhChHHHHHHHhhhCC
Q psy359          205 KVHTRTHT----------GEKPYACY--LCDKRFAQISDRIKHLKSSHN  241 (405)
Q Consensus       205 ~~H~~~h~----------~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~  241 (405)
                      ..|+...|          |.-+|+|.  .|+..|.+...-+.|+-..|.
T Consensus       123 d~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  123 DAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhcc
Confidence            99975543          45579996  499999999999999987775

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.92  E-value=0.013  Score=31.53  Aligned_cols=21  Identities=38%  Similarity=0.888  Sum_probs=19.6

Q ss_pred             eecCCCcccCCChHHHHHHHh
Q psy359          280 FKCDLCGNILSSKHILQEHVR  300 (405)
Q Consensus       280 ~~C~~C~~~f~~~~~l~~H~~  300 (405)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            789999999999999999987

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=94.78  E-value=0.22  Score=44.08  Aligned_cols=107  Identities=24%  Similarity=0.350  Sum_probs=71.6

Q ss_pred             cccceecCCCcccCC-ChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccC
Q psy359          276 RKLIFKCDLCGNILS-SKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKK  354 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~-~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  354 (405)
                      ..+...|-.|+..+. .++.+..|+-..|.-.           ..=++.-..-..|..|+..-..  .++|-+|.+.|..
T Consensus       141 t~fslqClFCn~e~lgnRs~~l~Hlf~~H~ln-----------iGlpDniVyvnelLehLkekL~--r~~CLyCekifrd  207 (423)
T KOG2482|consen  141 TIFSLQCLFCNNEGLGNRSEILEHLFHVHGLN-----------IGLPDNIVYVNELLEHLKEKLE--RLRCLYCEKIFRD  207 (423)
T ss_pred             CeeeeEEEEecchhcccHHHHHHHHHHHhhhc-----------cCCCcceeeHHHHHHHHHHHHh--hheeeeeccccCC
Confidence            345567888887654 4677777776555432           1111111223445555544333  3899999999999


Q ss_pred             chhHHHHhhh--hCCCC----------------------------------------------------c--ccCCcccc
Q psy359          355 KNHLTTHYRI--HTGEK----------------------------------------------------P--YQCDICGR  378 (405)
Q Consensus       355 ~~~l~~H~~~--h~~~~----------------------------------------------------~--~~C~~C~~  378 (405)
                      +..|..||+.  |-...                                                    +  ..|-+|..
T Consensus       208 kntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~  287 (423)
T KOG2482|consen  208 KNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTN  287 (423)
T ss_pred             cHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeecc
Confidence            9999999964  32110                                                    2  58999999


Q ss_pred             ccCChHHHHHHHHhhcc
Q psy359          379 GFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       379 ~f~~~~~l~~H~~~~h~  395 (405)
                      ..-++..|-.|+..-|-
T Consensus       288 ~~en~~~l~eHmk~vHe  304 (423)
T KOG2482|consen  288 FYENPVFLFEHMKIVHE  304 (423)
T ss_pred             chhhHHHHHHHHHHHHH
Confidence            88889999999998774

>KOG2893|consensus

Probab=94.62  E-value=0.0074  Score=50.11  Aligned_cols=46  Identities=37%  Similarity=0.694  Sum_probs=37.4

Q ss_pred             cccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcccCcchhhhhhhcccceecCCCcccCCChHHHHHH
Q psy359          219 CYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEH  298 (405)
Q Consensus       219 C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H  298 (405)
                      |.+|++.|..+.-|.+|++..|                                       |+|.+|-+.+-+-..|..|
T Consensus        13 cwycnrefddekiliqhqkakh---------------------------------------fkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAKH---------------------------------------FKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhhcc---------------------------------------ceeeeehhhhccCCCceee
Confidence            8899999999999999998754                                       8888888887776677777


Q ss_pred             Hhhhc
Q psy359          299 VRVVH  303 (405)
Q Consensus       299 ~~~~h  303 (405)
                      ...+|
T Consensus        54 cmqvh   58 (341)
T KOG2893|consen   54 CMQVH   58 (341)
T ss_pred             hhhhh
Confidence            66555

>KOG1146|consensus

Probab=94.51  E-value=0.018  Score=59.77  Aligned_cols=107  Identities=21%  Similarity=0.440  Sum_probs=77.8

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhc------CCCCcccccccc
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLH------FPLRPYACTQCD  349 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h------~~~~~~~C~~C~  349 (405)
                      ..+.|+|+.|+..|.....|..|+|..|..... .           .|-    ..+.|.+.-      -+.++|.|..|.
T Consensus       462 ~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~-~-----------~c~----~gq~~~~~arg~~~~~~~~p~~C~~C~  525 (1406)
T KOG1146|consen  462 FFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS-A-----------YCK----AGQNHPRLARGEVYRCPGKPYPCRACN  525 (1406)
T ss_pred             ccccccCCccchhhhhHHHhhhcccccccccch-h-----------HhH----hccccccccccccccCCCCcccceeee
Confidence            457899999999999999999999987765422 1           110    111121111      235789999999


Q ss_pred             ccccCchhHHHHhhh--hC----------C-------------------------------CCcccCCccccccCChHHH
Q psy359          350 KTFKKKNHLTTHYRI--HT----------G-------------------------------EKPYQCDICGRGFAQSNDM  386 (405)
Q Consensus       350 ~~f~~~~~l~~H~~~--h~----------~-------------------------------~~~~~C~~C~~~f~~~~~l  386 (405)
                      ..++....|..|+..  |-          |                               +-.+.|.+|++.-+-..+|
T Consensus       526 ~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnl  605 (1406)
T KOG1146|consen  526 YSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNL  605 (1406)
T ss_pred             eeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhcc
Confidence            999999999999864  20          0                               0148999999999999999


Q ss_pred             HHHHHhhccccc
Q psy359          387 KKHRRTVHKAQI  398 (405)
Q Consensus       387 ~~H~~~~h~~~~  398 (405)
                      +-|+...+..++
T Consensus       606 rihmtss~~s~~  617 (1406)
T KOG1146|consen  606 RIHMTASPSSSP  617 (1406)
T ss_pred             ccccccCCCCCC
Confidence            999988666554

>KOG2785|consensus

Probab=93.26  E-value=0.16  Score=45.91  Aligned_cols=73  Identities=19%  Similarity=0.314  Sum_probs=44.9

Q ss_pred             cccCCCccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhhcHHHHHHhhccCCCCccCccch---hccCChHHHH
Q psy359          129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCE---KSFKRKLHLK  205 (405)
Q Consensus       129 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~l~~~~~~~h~~~~~~~C~~C~---~~f~~~~~l~  205 (405)
                      -.|=.|+..+.+...-+.||-.+|+-..+  ...|.-.     ...|.......-  ..-+.|-.|+   +.|.+-...+
T Consensus       167 t~CLfC~~~~k~~e~~~~HM~~~HgffIP--dreYL~D-----~~GLl~YLgeKV--~~~~~CL~CN~~~~~f~sleavr  237 (390)
T KOG2785|consen  167 TDCLFCDKKSKSLEENLKHMFKEHGFFIP--DREYLTD-----EKGLLKYLGEKV--GIGFICLFCNELGRPFSSLEAVR  237 (390)
T ss_pred             cceeecCCCcccHHHHHHHHhhccCCcCC--chHhhhc-----hhHHHHHHHHHh--ccCceEEEeccccCcccccHHHH
Confidence            46888999999999999999999983221  1111000     001222211111  1247888888   7888888888


Q ss_pred             HHHhh
Q psy359          206 VHTRT  210 (405)
Q Consensus       206 ~H~~~  210 (405)
                      .||..
T Consensus       238 ~HM~~  242 (390)
T KOG2785|consen  238 AHMRD  242 (390)
T ss_pred             HHHhh
Confidence            88755

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.07  E-value=0.065  Score=30.71  Aligned_cols=23  Identities=17%  Similarity=0.574  Sum_probs=17.4

Q ss_pred             cccCCccccccCChHHHHHHHHh
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRT  392 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~  392 (405)
                      +|.|.+|++.|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46788888888877777777765

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.99  E-value=0.088  Score=27.61  Aligned_cols=20  Identities=25%  Similarity=0.723  Sum_probs=16.7

Q ss_pred             eecCCCcccCCChHHHHHHHh
Q psy359          280 FKCDLCGNILSSKHILQEHVR  300 (405)
Q Consensus       280 ~~C~~C~~~f~~~~~l~~H~~  300 (405)
                      ..|+.||+.| ..+.|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            5799999999 6778888876

>KOG4173|consensus

Probab=92.73  E-value=0.055  Score=44.09  Aligned_cols=51  Identities=33%  Similarity=0.653  Sum_probs=26.6

Q ss_pred             cccccccccCchhHHHHhhhhC----------CCCcccCCc--cccccCChHHHHHHHHhhcc
Q psy359          345 CTQCDKTFKKKNHLTTHYRIHT----------GEKPYQCDI--CGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       345 C~~C~~~f~~~~~l~~H~~~h~----------~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~  395 (405)
                      |..|.+.|.+.--|..|+..-|          |...|+|-+  |+-.|.+...-..|+...|+
T Consensus       109 Cs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  109 CSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhcc
Confidence            5555555555555555554322          233455544  55556555555555555554

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.97  E-value=0.13  Score=29.35  Aligned_cols=23  Identities=22%  Similarity=0.543  Sum_probs=20.8

Q ss_pred             ceecCCCcccCCChHHHHHHHhh
Q psy359          279 IFKCDLCGNILSSKHILQEHVRV  301 (405)
Q Consensus       279 ~~~C~~C~~~f~~~~~l~~H~~~  301 (405)
                      +|.|++|+..|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999873

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146|consensus

Probab=91.96  E-value=0.046  Score=56.97  Aligned_cols=106  Identities=18%  Similarity=0.252  Sum_probs=65.2

Q ss_pred             ccccCCCCcchHHhhhhhcccCcchhhhhhhcccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcc
Q psy359          245 ESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCG  324 (405)
Q Consensus       245 c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~  324 (405)
                      +..+..+|........+-.....+     ....-.+.|..|++.|...-.+. |+..                       
T Consensus      1231 ~~~~e~~f~~~~~~~~~a~~~~~~-----~~~sGe~~c~~~~~~~~~~~~~~-~l~~----------------------- 1281 (1406)
T KOG1146|consen 1231 PNALEQPFPQEPEPTATAPPKPPE-----LPASGEGECGAVDELLTPSFGIS-TLDV----------------------- 1281 (1406)
T ss_pred             HHhhhcCccCcccccccCCCCCCc-----CcCCCcchhhhccccccCcccee-eccc-----------------------
Confidence            777777777665555443222211     11333577888888776665444 4432                       


Q ss_pred             cchHHHHhhhhhcCCCCccccccccccccCchhHHHHhhh-----------------hCCCCcccCCccccccCChHHHH
Q psy359          325 EYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRI-----------------HTGEKPYQCDICGRGFAQSNDMK  387 (405)
Q Consensus       325 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-----------------h~~~~~~~C~~C~~~f~~~~~l~  387 (405)
                                     ..+|.|..|...|.....|..|.+.                 +-...+| |..|...|.....|+
T Consensus      1282 ---------------~~~~~~~~~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~~~~~alq 1345 (1406)
T KOG1146|consen 1282 ---------------THRYLCRQCKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH-CLACEVLLSGREALQ 1345 (1406)
T ss_pred             ---------------chhHHHHHHHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccccc-chHHHhhcchhHHHH
Confidence                           2336666666666666666666532                 2233456 999999999999999


Q ss_pred             HHHHhhcc
Q psy359          388 KHRRTVHK  395 (405)
Q Consensus       388 ~H~~~~h~  395 (405)
                      .|+++-+.
T Consensus      1346 ihm~~~~~ 1353 (1406)
T KOG1146|consen 1346 IHMRSSAH 1353 (1406)
T ss_pred             HHHHHhhh
Confidence            99887443

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=91.37  E-value=0.3  Score=36.66  Aligned_cols=26  Identities=35%  Similarity=0.626  Sum_probs=24.4

Q ss_pred             cccC----CccccccCChHHHHHHHHhhcc
Q psy359          370 PYQC----DICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       370 ~~~C----~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      .|.|    ..|++.+.+...++.|++.+||
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            4999    9999999999999999999997

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>TIGR00622 ssl1 transcription factor ssl1

Probab=91.07  E-value=0.22  Score=36.98  Aligned_cols=26  Identities=15%  Similarity=0.369  Sum_probs=19.9

Q ss_pred             cccceecCCCcccCCChHHHHHHHhh
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRV  301 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~  301 (405)
                      ....|.|+.|...|-..-.+..|...
T Consensus        78 ~~~~y~C~~C~~~FC~dCD~fiHe~L  103 (112)
T TIGR00622        78 DSHRYVCAVCKNVFCVDCDVFVHESL  103 (112)
T ss_pred             cccceeCCCCCCccccccchhhhhhc
Confidence            34579999999999888777777663

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>TIGR00622 ssl1 transcription factor ssl1

Probab=90.41  E-value=0.46  Score=35.30  Aligned_cols=88  Identities=18%  Similarity=0.277  Sum_probs=44.0

Q ss_pred             ccceecCCCcccCCChHHHHHHHhhhccCCCccccc-c---CCCCCcCCCcccchHHHHhh-hhhcCCCCcccccccccc
Q psy359          277 KLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHY-E---YKPDGVCDVCGEYKKQLLQH-KRLHFPLRPYACTQCDKT  351 (405)
Q Consensus       277 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~-~---~~~~~~C~~C~~~~~~l~~H-~~~h~~~~~~~C~~C~~~  351 (405)
                      +.|..|++|+-+..+...|.+-.  +|+..-+.+.. .   ......|-.|.......... ...-.....|+|+.|+..
T Consensus        13 ~LP~~CpiCgLtLVss~HLARSy--HHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~y~C~~C~~~   90 (112)
T TIGR00622        13 ELPVECPICGLTLILSTHLARSY--HHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFDELKDSHRYVCAVCKNV   90 (112)
T ss_pred             CCCCcCCcCCCEEeccchHHHhh--hccCCCcccccccccccCCCCcccCcCCCCCCcccccccccccccceeCCCCCCc
Confidence            34678888888888887777654  34433222210 0   01111244444420000000 000122335777777777


Q ss_pred             ccCchhHHHHhhhhC
Q psy359          352 FKKKNHLTTHYRIHT  366 (405)
Q Consensus       352 f~~~~~l~~H~~~h~  366 (405)
                      |-..-+...|...|.
T Consensus        91 FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        91 FCVDCDVFVHESLHC  105 (112)
T ss_pred             cccccchhhhhhccC
Confidence            777777777755544

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2893|consensus

Probab=89.35  E-value=0.1  Score=43.57  Aligned_cols=48  Identities=21%  Similarity=0.494  Sum_probs=36.3

Q ss_pred             cCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCC
Q psy359          190 PCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHN  241 (405)
Q Consensus       190 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  241 (405)
                      .|=.|++.|.+..-|.+|++..|    |+|.+|.+.+.+-.-|..|....|.
T Consensus        12 wcwycnrefddekiliqhqkakh----fkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH----FKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc----ceeeeehhhhccCCCceeehhhhhh
Confidence            46678888888888888876644    8888888888777777777766554

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=89.33  E-value=0.22  Score=28.16  Aligned_cols=24  Identities=29%  Similarity=1.036  Sum_probs=14.0

Q ss_pred             cccccccccccCchhHHHHhhhhCCCCcccCCcccc
Q psy359          343 YACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGR  378 (405)
Q Consensus       343 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  378 (405)
                      |+|..||..+....            .++.|++|+.
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCC
Confidence            56666666554432            5566766664

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=87.43  E-value=0.42  Score=29.96  Aligned_cols=31  Identities=29%  Similarity=0.575  Sum_probs=24.4

Q ss_pred             hcCCCCcccccchHhhhChHHHHHHHhhhCC
Q psy359          211 HTGEKPYACYLCDKRFAQISDRIKHLKSSHN  241 (405)
Q Consensus       211 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  241 (405)
                      ..|+..++|+.|+..|....++.+|+...|+
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            3466678888888888888888888877665

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=86.65  E-value=0.26  Score=30.90  Aligned_cols=30  Identities=13%  Similarity=0.318  Sum_probs=23.0

Q ss_pred             cCCCCccccccccccccCchhHHHHhhhhC
Q psy359          337 HFPLRPYACTQCDKTFKKKNHLTTHYRIHT  366 (405)
Q Consensus       337 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  366 (405)
                      -.+|..++|+.|+..|...-++..|...-|
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            456777888888888888888888875443

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=86.25  E-value=0.32  Score=36.20  Aligned_cols=13  Identities=31%  Similarity=0.851  Sum_probs=6.4

Q ss_pred             CCcccccchHhhh
Q psy359          215 KPYACYLCDKRFA  227 (405)
Q Consensus       215 ~~~~C~~C~~~f~  227 (405)
                      .|..|+.||..|.
T Consensus        25 ~PivCP~CG~~~~   37 (108)
T PF09538_consen   25 DPIVCPKCGTEFP   37 (108)
T ss_pred             CCccCCCCCCccC
Confidence            3444555555554

The function of members of this family is unknown.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=86.15  E-value=0.18  Score=48.31  Aligned_cols=61  Identities=31%  Similarity=0.660  Sum_probs=53.3

Q ss_pred             CccccccccccccCchhHHHHhh--hhCCC--CcccCC--ccccccCChHHHHHHHHhhcccccccc
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYR--IHTGE--KPYQCD--ICGRGFAQSNDMKKHRRTVHKAQIHAV  401 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~  401 (405)
                      .++.|..|...|.....|..|.+  .|.++  +++.|+  +|++.|.....|..|...|.+..+..+
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            46889999999999999999998  79888  899999  799999999999999999888876544

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=84.79  E-value=1  Score=33.79  Aligned_cols=84  Identities=18%  Similarity=0.286  Sum_probs=48.7

Q ss_pred             ccceecCCCcccCCChHHHHHHHhhhccCCCcccc----------c--cCCCC-CcCCCcccchHHHHhhhhhcCCCCcc
Q psy359          277 KLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYH----------Y--EYKPD-GVCDVCGEYKKQLLQHKRLHFPLRPY  343 (405)
Q Consensus       277 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~----------~--~~~~~-~~C~~C~~~~~~l~~H~~~h~~~~~~  343 (405)
                      -+...|..|+..... +++..|++..|........          .  ...+. ..=+.   ........+.++   ..|
T Consensus         9 ~~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~---~~~~Pi~gLp~~---~G~   81 (109)
T PF12013_consen    9 YRVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPP---DPSPPIPGLPVY---DGY   81 (109)
T ss_pred             CCEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCC---CCCCcCCCCCCC---CCe
Confidence            346899999987766 8999999966654421100          0  00000 00000   000000011111   239


Q ss_pred             cc----ccccccccCchhHHHHhhhhCC
Q psy359          344 AC----TQCDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       344 ~C----~~C~~~f~~~~~l~~H~~~h~~  367 (405)
                      .|    ..|+..+.+...+..|++.+||
T Consensus        82 ~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   82 RCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            99    9999999999999999998875

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=83.75  E-value=0.25  Score=47.26  Aligned_cols=57  Identities=32%  Similarity=0.585  Sum_probs=50.4

Q ss_pred             CCccCccchhccCChHHHHHHHh--hhcCC--CCcccc--cchHhhhChHHHHHHHhhhCCCC
Q psy359          187 RKFPCTFCEKSFKRKLHLKVHTR--THTGE--KPYACY--LCDKRFAQISDRIKHLKSSHNFD  243 (405)
Q Consensus       187 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~  243 (405)
                      .++.|..|...|.....|.+|..  .|.++  +++.|+  .|++.|.....+..|...+.+..
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  350 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSIS  350 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCC
Confidence            36899999999999999999999  79999  999999  79999999999999998866543

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=82.48  E-value=0.55  Score=39.64  Aligned_cols=30  Identities=27%  Similarity=0.613  Sum_probs=20.2

Q ss_pred             CCcccCCccccccCChHHHHHHHHhhcccc
Q psy359          368 EKPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       368 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      +..|.|.+|+|.|.-..-.++|+...|.+.
T Consensus        75 ~~K~~C~lc~KlFkg~eFV~KHI~nKH~e~  104 (214)
T PF04959_consen   75 EDKWRCPLCGKLFKGPEFVRKHIFNKHPEK  104 (214)
T ss_dssp             SEEEEE-SSS-EESSHHHHHHHHHHH-HHH
T ss_pred             CCEECCCCCCcccCChHHHHHHHhhcCHHH
Confidence            445777778888888888888888877765

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=82.35  E-value=0.34  Score=38.62  Aligned_cols=15  Identities=27%  Similarity=0.627  Sum_probs=8.2

Q ss_pred             cccccccccccCchh
Q psy359          343 YACTQCDKTFKKKNH  357 (405)
Q Consensus       343 ~~C~~C~~~f~~~~~  357 (405)
                      ++|+-||+.|.....
T Consensus        29 ~~c~~c~~~f~~~e~   43 (154)
T PRK00464         29 RECLACGKRFTTFER   43 (154)
T ss_pred             eeccccCCcceEeEe
Confidence            555566655555433

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=80.70  E-value=1.3  Score=26.97  Aligned_cols=27  Identities=30%  Similarity=0.688  Sum_probs=13.6

Q ss_pred             CCcccCCccccccCCh----HHHHHHHHhhc
Q psy359          368 EKPYQCDICGRGFAQS----NDMKKHRRTVH  394 (405)
Q Consensus       368 ~~~~~C~~C~~~f~~~----~~l~~H~~~~h  394 (405)
                      ....+|.+|++.+...    +.|..|++..|
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHHHTT
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhhhhC
Confidence            3445666666666553    66777775544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=80.42  E-value=1.3  Score=28.46  Aligned_cols=13  Identities=15%  Similarity=0.644  Sum_probs=7.7

Q ss_pred             cccccccccccCc
Q psy359          343 YACTQCDKTFKKK  355 (405)
Q Consensus       343 ~~C~~C~~~f~~~  355 (405)
                      |.|+.||..--..
T Consensus        28 F~CPnCGe~~I~R   40 (61)
T COG2888          28 FPCPNCGEVEIYR   40 (61)
T ss_pred             eeCCCCCceeeeh
Confidence            6777777544443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	405
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-23
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		4e-14
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		4e-14
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		4e-14
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		4e-14
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		7e-14
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		8e-14
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		8e-14
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-13
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		3e-13
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-09
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-06
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		7e-12
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-11
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-11
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		7e-11
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		2e-10
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		5e-10
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		3e-06
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		7e-10
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-09
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-09
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		5e-09
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		6e-09
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		9e-09
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-08
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-08
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		4e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		7e-08
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		1e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-07
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		3e-07
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		3e-07
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		4e-07
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		6e-07
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		2e-06
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		5e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		1e-05
2ytk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-06
2yts_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-05
2yrj_A	46	Solution Structure Of The C2h2-Type Zinc Finger Dom		1e-04
2eog_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2en6_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2em2_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		2e-04
2epu_A	45	Solution Structure Of The Secound C2h2 Type Zinc Fi		2e-04
2emj_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2eqw_A	42	Solution Structure Of The 6th C2h2 Type Zinc Finger		3e-04
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		3e-04
2el4_A	46	Solution Structure Of The 15th Zf-C2h2 Domain From		3e-04
2emm_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		3e-04
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		4e-04
2ytg_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2emk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2eq3_A	46	Solution Structure Of The 17th C2h2 Type Zinc Finge		5e-04
2eq1_A	46	Solution Structure Of The 9th C2h2 Type Zinc Finger		5e-04
2em4_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2ene_A	46	Solution Structure Of The C2h2 Type Zinc Finger (re		6e-04
2ep1_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2emp_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2emh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2eoe_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-04
2ep2_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-04
2emw_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 95/210 (45%), Gaps = 48/210 (22%)
Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFE 245
           E+ + C  C KSF R  HL  H RTHTGEKPY C  C K F+   D              
Sbjct: 19  EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKD-------------- 64
Query: 246 SVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMG 305
                   LTR+   H  +               +KC  CG   S +  L+ H R     
Sbjct: 65  --------LTRHQRTHTGEK-------------PYKCPECGKSFSQRANLRAHQRT---- 99
Query: 306 LSRKYHYEYKPDGVCDVCGEYKKQLLQ---HKRLHFPLRPYACTQCDKTFKKKNHLTTHY 362
                H   KP   C  CG+   QL     H+R H   +PY C +C K+F ++++L TH 
Sbjct: 100 -----HTGEKPY-ACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQ 153
Query: 363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           R HTGEKPY+C  CG+ F++ + +  H+RT
Sbjct: 154 RTHTGEKPYKCPECGKSFSRRDALNVHQRT 183

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 47/74 (63%)
Query: 316 PDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI 375
           P   CD       +L +H R+H   +P+ C  C + F + +HLTTH R HTGEKP+ CDI
Sbjct: 8   PVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI 67
Query: 376 CGRGFAQSNDMKKH 389
           CGR FA+S++ K+H
Sbjct: 68  CGRKFARSDERKRH 81

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 47/74 (63%)
Query: 316 PDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI 375
           P   CD       +L +H R+H   +P+ C  C + F + +HLTTH R HTGEKP+ CDI
Sbjct: 8   PVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI 67
Query: 376 CGRGFAQSNDMKKH 389
           CGR FA+S++ K+H
Sbjct: 68  CGRKFARSDERKRH 81

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 47/74 (63%)
Query: 316 PDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI 375
           P   CD       +L +H R+H   +P+ C  C + F + +HLTTH R HTGEKP+ CDI
Sbjct: 8   PVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI 67
Query: 376 CGRGFAQSNDMKKH 389
           CGR FA+S++ K+H
Sbjct: 68  CGRKFARSDERKRH 81

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 47/74 (63%)
Query: 316 PDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI 375
           P   CD       +L +H R+H   +P+ C  C + F + +HLTTH R HTGEKP+ CDI
Sbjct: 7   PVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI 66
Query: 376 CGRGFAQSNDMKKH 389
           CGR FA+S++ K+H
Sbjct: 67  CGRKFARSDERKRH 80

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 46/74 (62%)
Query: 316 PDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI 375
           P   CD        L +H R+H   +P+ C  C + F + +HLTTH R HTGEKP+ CDI
Sbjct: 8   PVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI 67
Query: 376 CGRGFAQSNDMKKH 389
           CGR FA+S++ K+H
Sbjct: 68  CGRKFARSDERKRH 81

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 46/74 (62%)
Query: 316 PDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI 375
           P   CD        L +H R+H   +P+ C  C + F + +HLTTH R HTGEKP+ CDI
Sbjct: 8   PVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI 67
Query: 376 CGRGFAQSNDMKKH 389
           CGR FA+S++ K+H
Sbjct: 68  CGRKFARSDERKRH 81

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 46/74 (62%)
Query: 316 PDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI 375
           P   CD        L +H R+H   +P+ C  C + F + +HLTTH R HTGEKP+ CDI
Sbjct: 8   PVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI 67
Query: 376 CGRGFAQSNDMKKH 389
           CGR FA+S++ K+H
Sbjct: 68  CGRKFARSDERKRH 81

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 340 LRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIH 399
           ++P+ C  C + F + +HLTTH R HTGEKP+ CDICGR FA+S++ K+HR   H   I 
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPI- 59
Query: 400 AVEDK 404
            +EDK
Sbjct: 60  -LEDK 63

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 62/120 (51%), Gaps = 11/120 (9%)
Query: 127 LTYPCDQCDRTYQTKKSLYVH-RRAHLGIVYRYKSKTDRCELCDKVVTNLAA-----HHN 180
           L+ P   CDRT+ T   L  H    H+G   +  +     E C +   +  A     +H 
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQ-NNHVCYWEECPREGKSFKAKYKLVNHI 82
Query: 181 EVHAHERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYACYL--CDKRFAQISDRIKHL 236
            VH  E+ FPC F  C K F R  +LK+H RTHTGEKP+ C    CD+RFA  SDR KH+
Sbjct: 83  RVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM 142

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 16/136 (11%)
Query: 268 EAIKTERERKLIFKCDL------CGNILSSKHILQEHVRVVHMGLSRKY----HYEYKPD 317
           + IK E   K I +  L      C    S+ H L  HV + H+G   +     ++E  P 
Sbjct: 8   QPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR 67
Query: 318 GVCDVCGEYKKQLLQHKRLHFPLRPYACT--QCDKTFKKKNHLTTHYRIHTGEKPYQCDI 375
                  +YK  L+ H R+H   +P+ C    C K F +  +L  H R HTGEKP++C+ 
Sbjct: 68  EGKSFKAKYK--LVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEF 125
Query: 376 --CGRGFAQSNDMKKH 389
             C R FA S+D KKH
Sbjct: 126 EGCDRRFANSSDRKKH 141

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 345 CTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI--CGRGFAQSNDMKKHRRT 392
           C +  K+FK K  L  H R+HTGEKP+ C    CG+ FA+S ++K H+RT
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT 114

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 320 CDVCGEYKKQ---LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC 376
           C  CG+   Q   L +H+R H   +PY C +C K+F + + L  H R HTGEKPY+C  C
Sbjct: 7   CPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCPEC 66
Query: 377 GRGFAQSNDMKKHRRT 392
           G+ F++S+ + +H+RT
Sbjct: 67  GKSFSRSDHLSRHQRT 82

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 323 CGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRG 379
           CG+   +K Q  +H  +H  LRPY C  C K FK K+HL  H +IHTG KPY+C+IC + 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 380 FAQSNDMKKH 389
           F   +   +H
Sbjct: 75  FMWRDSFHRH 84

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 315 KPDGVCDVCGEY---KKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPY 371
           K + +C  CG +      LL H+R H   RPY C  C K F++++HL  H  IH+ EKP+
Sbjct: 15  KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF 74
Query: 372 QCDICGRGFAQSNDMKKHRRTVH 394
           +C  CG+GF QS  +  H +T+H
Sbjct: 75  KCQECGKGFCQSRTLAVH-KTLH 96

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 320 CDVCGEYKKQ---LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC 376
           C +CG+  K+   L  H  +H   RPY C  C K F +K+ +  H  IHTGEKP++C +C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 377 GRGFAQSNDMKKHRR 391
           G+ F+QS+++  H R
Sbjct: 64  GKAFSQSSNLITHSR 78

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 340 LRPYACT--QCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +RPYAC    CD+ F + + LT H RIHTG+KP+QC IC R F++S+ +  H RT
Sbjct: 17  MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 131 CDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVV---TNLAAHH--NEVHAH 185
           C  C + + +K  L VH R H G       K   C  C K      NL  H   N ++  
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTG------EKPFECPKCGKCYFRKENLLEHEARNCMNRS 63
Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHN 241
           E+ F C+ C+++F+R++ L++H  +HTGE PY C  C ++F Q  D   H+   H+
Sbjct: 64  EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 320 CDVCGEYKKQLLQHKR---LHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC 376
           C  C   K+ LL+H+    ++   + + C+ C +TF+++  L  H   HTGE PY+C  C
Sbjct: 41  CGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSC 100
Query: 377 GRGFAQSNDMKKHRRTVHKA 396
            + F Q  D++ H   +H  
Sbjct: 101 SQQFMQKKDLQSHMIKLHSG 120

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRR 391
           +PY C +C K F + + L  H R+HTGEKPY+C  CG+ F+Q++ +  H+R
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 39/74 (52%)
Query: 316 PDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI 375
           P   CD     K  L  H R+H   +P+ C  C + F ++  L  H R HTGEKP+ CDI
Sbjct: 8   PVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDI 67
Query: 376 CGRGFAQSNDMKKH 389
           CGR FA  +   +H
Sbjct: 68  CGRKFATLHTRTRH 81

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 38/74 (51%)
Query: 316 PDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI 375
           P   CD     K  L  H R+H   +P+ C  C + F +   L  H R HTGEKP+ CDI
Sbjct: 8   PVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDI 67
Query: 376 CGRGFAQSNDMKKH 389
           CGR FA  +   +H
Sbjct: 68  CGRKFATLHTRDRH 81

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 330 LLQHKRLHFPLRPYACTQ--CDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMK 387
           L  H R H   +PY CT   CD  F + + LT HYR HTG KP+QC +C R F++S+ + 
Sbjct: 33  LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA 92
Query: 388 KH 389
            H
Sbjct: 93  LH 94

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 121 ENKTLPLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCEL--CDKVVT--NLA 176
           E +     YP   C++ Y     L +H R H G       K  +C+   C++  +  +  
Sbjct: 3   EKRPFMCAYP--GCNKRYFKLSHLQMHSRKHTG------EKPYQCDFKDCERRFSRSDQL 54
Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYL--CDKRFAQISDRIK 234
             H   H   + F C  C++ F R  HLK HTRTHTGEKP++C    C K+FA+  + ++
Sbjct: 55  KRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVR 114
Query: 235 H 235
           H
Sbjct: 115 H 115

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 329 QLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI--CGRGFAQSNDM 386
           QL +H+R H  ++P+ C  C + F + +HL TH R HTGEKP+ C    C + FA+S+++
Sbjct: 53  QLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDEL 112
Query: 387 KKH 389
            +H
Sbjct: 113 VRH 115

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 320 CDVCGEYKK---QLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGE--KPYQCD 374
           C++CG+  +    L +HK  H   +PY+C  C   FK+K+ ++ H R H G   KPY C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 375 ICGRGFAQSNDMKKHRRTVH 394
            CG+GF++ + +  H + VH
Sbjct: 70  SCGKGFSRPDHLNGHIKQVH 89

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ 397
           +PY C +C  +F+ K +L +H  +HTGEKPY+C+ICG  F +  ++K H R +H  +
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR-IHSGE 71

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 319 VCDVCGEY---KKQLLQHKRLHFPLRPYACT--QCDKTFKKKNHLTTHYRIHTGEKPYQC 373
           VC  CG+      +L +H+ +H   +P+ CT   C K F    +L TH RIHTG++PY C
Sbjct: 36  VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 95
Query: 374 --DICGRGFAQSNDMKKHRRTVHKAQ 397
             D C + FAQS ++K H  T  KA+
Sbjct: 96  PFDGCNKKFAQSTNLKSHILTHAKAK 121

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           R Y C +C K+F   + L+ H R HTGEKPY+CD CG+ F Q + +  H R 
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV 68

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 343 YACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQI 398
           + C  C + F ++ HL  HYR HT EKPY C +C R F + + + +H + +H   +
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 320 CDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC 376
           C+VCG+    K +L  H R H  ++PY C  CD      + L  H RIH+ E+P++C IC
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70
Query: 377 GRGFAQSNDMKKHRRT 392
                 S+ +  H R+
Sbjct: 71  PYASRNSSQLTVHLRS 86

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 179 HNEVHAHERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYAC--YLCDKRFAQISDRIK 234
           H   H  E+   CTF  C KS+ R  +LK H R+HTGEKPY C    C K F+  SDR K
Sbjct: 58  HMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAK 117
Query: 235 HLKSSHN 241
           H   +H+
Sbjct: 118 HQNRTHS 124

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 281 KCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCG------EYKKQ--LLQ 332
           + D C     S+  L  H+   H+   RK       + VC   G       +K Q  L+ 
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERK-------EFVCHWGGCSRELRPFKAQYMLVV 57
Query: 333 HKRLHFPLRPYACT--QCDKTFKKKNHLTTHYRIHTGEKPYQC--DICGRGFAQSNDMKK 388
           H R H   +P+ CT   C K++ +  +L TH R HTGEKPY C  + C + F+ ++D  K
Sbjct: 58  HMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAK 117
Query: 389 HRRTVH 394
           H+   H
Sbjct: 118 HQNRTH 123

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 340 LRPYACTQ--CDKTFKKKNHLTTHYRIHTGEKPYQCDI--CGRGFAQSNDMKKHRRT 392
           +R + C+   C KT+ K +HL  H R HTGEKP+ C    C R FA+S+++ +HRRT
Sbjct: 15  IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 165 CELCDK---VVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYL 221
           C +C +    +T+L  H N +H+ E+K+PC +CEK F    +   H   HTGE+ Y C  
Sbjct: 25  CIVCKRSYVCLTSLRRHFN-IHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLA 83
Query: 222 CDKRFAQISDRIKHLKSSHNFD 243
           C K F        H+KS H+ D
Sbjct: 84  CGKSFINYQFMSSHIKSVHSQD 105

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 311 HYEYKPDG----VCDVCGEYK---KQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYR 363
           HYE   DG    +C VC         L +H  +H   + Y C  C+K F    + T H  
Sbjct: 12  HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEI 71
Query: 364 IHTGEKPYQCDICGRGFAQSNDMKKHRRTVH 394
            HTGE+ YQC  CG+ F     M  H ++VH
Sbjct: 72  HHTGERRYQCLACGKSFINYQFMSSHIKSVH 102

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 319 VCDVCGEYK-----KQLLQHKRLHFPLRPYACTQ--CDKTFKKKNHLTTHYRIHTGEKPY 371
            CD  G  K       L  H R H   +PY C    C   F + + LT HYR HTG +P+
Sbjct: 8   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 67
Query: 372 QCDICGRGFAQSNDMKKH 389
           QC  C R F++S+ +  H
Sbjct: 68  QCQKCDRAFSRSDHLALH 85

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 319 VCDVCGEYK-----KQLLQHKRLHFPLRPYACTQ--CDKTFKKKNHLTTHYRIHTGEKPY 371
            CD  G  K       L  H R H   +PY C    C   F + + LT HYR HTG +P+
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66
Query: 372 QCDICGRGFAQSNDMKKH 389
           QC  C R F++S+ +  H
Sbjct: 67  QCQKCDRAFSRSDHLALH 84

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 191 CTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSH 240
           C++C K F+   +L +H RTHTGEKPY C  C+   AQ +    HL+  H
Sbjct: 7   CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH 56

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 345 CTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHK 395
           C+ C K F+   +L  H R HTGEKPY+C+ C    AQ   ++ H    HK
Sbjct: 7   CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK 57

>pdb|2YTK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 396- 428) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           +PY C +C K F + +HLT H+RIHTGEKP
Sbjct: 11  KPYKCNECGKVFTQNSHLTNHWRIHTGEKP 40

>pdb|2YTS|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 715- 747) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           +PY C +C K+F +K+HL  H RIHTGEKP
Sbjct: 11  KPYICNECGKSFIQKSHLNRHRRIHTGEKP 40

>pdb|2YRJ|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (781- 813) From Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           +PY C +C K F +K +LT H RIHTGEKP
Sbjct: 11  KPYRCGECGKAFAQKANLTQHQRIHTGEKP 40

>pdb|2EOG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 693- 723) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 340 LRPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           ++PY C++C K F+ K++L  H R HTGEKP
Sbjct: 8   VKPYGCSECGKAFRSKSYLIIHMRTHTGEKP 38

>pdb|2EN6|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 887- 919) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           +PY C +C KTF +K+ L+ H R HTGEKP
Sbjct: 11  KPYGCNECGKTFSQKSILSAHQRTHTGEKP 40

>pdb|2EM2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 584- 616) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           +P+ C +C K F++  HL +H RIHTGEKP
Sbjct: 11  KPFKCKECGKAFRQNIHLASHLRIHTGEKP 40

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 179 HNEVHAHERKFPC--TFCEKSFKRKLHLKVHTRTHTGEKPYACYL--CDKRFAQISDRIK 234
           H   H  E+ FPC    CEK F    HL  H+ THTGEK + C    CD RF   ++  K
Sbjct: 24  HLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKK 83
Query: 235 HLKSSHN 241
           H    HN
Sbjct: 84  HFNRFHN 90

>pdb|2EPU|A Chain A, Solution Structure Of The Secound C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 32 Length = 45

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEK 369
           +P+ CT C K+F+ K +L TH RIHTGEK
Sbjct: 11  KPFECTHCGKSFRAKGNLVTHQRIHTGEK 39

>pdb|2EMJ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 612- 644) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           +P+ C +C K+F   + L TH RIHTGEKP
Sbjct: 11  KPFECAECGKSFSISSQLATHQRIHTGEKP 40

>pdb|2EQW|A Chain A, Solution Structure Of The 6th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 484 Length = 42

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGE 368
           +PY CT+C K F +K+H  TH RIHTGE
Sbjct: 9   KPYVCTECGKAFIRKSHFITHERIHTGE 36

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 335 RLHFPLRPYACTQCDKTFKKKNHLTTHY-RIHTGE---KPYQCDICGRGFAQSNDMKKH 389
           R H   +PYAC+ CDKTF++K  L  H+ R H        + C  CG+ F + N M +H
Sbjct: 8   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66

>pdb|2EL4|A Chain A, Solution Structure Of The 15th Zf-C2h2 Domain From Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 340 LRPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           ++PY C+QC KTF  K+ L  H R HTG KP
Sbjct: 10  VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP 40

>pdb|2EMM|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 544- 576) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           RP+ C +C K+F +  HL  H RIHTGEKP
Sbjct: 11  RPHKCNECGKSFIQSAHLIQHQRIHTGEKP 40

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 183 HAHERKFPC--TFCEKSFKRKLHLKVHTRTHTGEKPYACYL--CDKRFAQISDRIKHLKS 238
           H  E+ FPC    CEK F    HL  H+ THTGEK + C    CD RF   ++  KH   
Sbjct: 37  HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR 96
Query: 239 SHN 241
            HN
Sbjct: 97  FHN 99

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKH 389
           RP+ C  C KT++  + L+ H R H G +P  C  CG+ F   +++ +H
Sbjct: 3   RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRH 51

>pdb|2YTG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 369- 401) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           +P+ C +C K++ ++ HLT H R+HTGEKP
Sbjct: 11  KPFKCGECGKSYNQRVHLTQHQRVHTGEKP 40

>pdb|2EMK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 668- 700) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           +PY C +C K F +  HL  H R+HTGEKP
Sbjct: 11  KPYECKECGKAFSQTTHLIQHQRVHTGEKP 40

>pdb|2EQ3|A Chain A, Solution Structure Of The 17th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           +PY C QC K F  ++ LTTH  IHTG+KP
Sbjct: 11  KPYECNQCGKAFSVRSSLTTHQAIHTGKKP 40

>pdb|2EQ1|A Chain A, Solution Structure Of The 9th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           +PY C +C K F+  ++LTTH  IHTGEKP
Sbjct: 11  KPYKCNECGKAFRAHSNLTTHQVIHTGEKP 40

>pdb|2EM4|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 724- 756) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           RPY C +C K FK K+ L  H R HTGEKP
Sbjct: 11  RPYECIECGKAFKTKSSLICHRRSHTGEKP 40

>pdb|2ENE|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (region 592- 624) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           +PY C +C K F+  ++L+ H RIHTGEKP
Sbjct: 11  KPYKCNECGKVFRHNSYLSRHQRIHTGEKP 40

>pdb|2EP1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 435- 467) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           +PY C+ C K+F KK+ L  H RIHTGE P
Sbjct: 11  KPYECSDCGKSFIKKSQLHVHQRIHTGENP 40

>pdb|2EMP|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 536- 568) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 340 LRPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           ++PY C +C K F   + LTTH  IHTGEKP
Sbjct: 10  VKPYMCNECGKAFSVYSSLTTHQVIHTGEKP 40

>pdb|2EMH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 491- 523) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           RPY CT C K F  +++L  H +IHTGEKP
Sbjct: 11  RPYICTVCGKAFTDRSNLIKHQKIHTGEKP 40

>pdb|2EOE|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 508- 540) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           +PY C +C K F + +HL  H RIHTG KP
Sbjct: 11  KPYKCNECGKVFTQNSHLANHQRIHTGVKP 40

>pdb|2EP2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 603- 635) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           +PY C+ C K+F KK+ L  H +IHTGEKP
Sbjct: 11  KPYECSICGKSFTKKSQLHVHQQIHTGEKP 40

>pdb|2EMW|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 301- 331) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEK 369
           +PY C +C K F  K++L  H RIHTGEK
Sbjct: 9   KPYGCNECGKDFSSKSYLIVHQRIHTGEK 37

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	405
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-35
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-29
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-27
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-16
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-16
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-10
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-26
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	7e-16
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-12
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-23
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-21
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-18
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-17
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-22
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	6e-15
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	7e-12
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-22
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-18
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-13
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-13
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-21
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-17
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-14
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-11
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	9e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-21
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-15
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-21
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-17
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	9e-14
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-10
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-21
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-15
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-20
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-17
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-16
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-11
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-19
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-17
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-15
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-20
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-20
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-14
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-12
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	9e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-20
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-14
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-09
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	9e-20
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-16
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-19
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-18
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-19
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-19
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-16
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-19
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-17
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-13
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-10
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-14
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-13
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-18
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	9e-13
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-18
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-13
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-11
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-18
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-14
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-18
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-14
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	9e-18
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-13
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	7e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-16
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	9e-06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-15
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-13
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-15
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-11
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-11
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-15
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-14
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-14
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	7e-14
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-15
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	9e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-14
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-10
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-14
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-14
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	4e-14
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-14
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-14
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-14
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-10
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-14
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-14
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-14
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-14
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-14
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-09
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-14
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-14
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-14
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-14
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-10
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-14
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-13
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-13
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-10
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-13
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-13
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-13
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-13
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-13
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-13
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-10
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	6e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-13
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-10
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-13
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-13
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-09
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-13
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-13
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-10
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-13
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-10
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-13
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-13
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-10
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-13
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-13
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-13
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-10
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-13
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-13
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-13
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-09
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-13
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-13
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-10
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-13
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-13
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-10
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-13
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-13
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-13
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-13
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-13
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-10
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-13
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-10
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-13
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-13
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-13
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	6e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-09
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-13
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-10
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-13
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-10
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-13
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-10
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-12
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-12
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	4e-12
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	4e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-09
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	6e-12
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	7e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-12
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-09
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	9e-12
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-09
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	4e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-12
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	9e-08
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-09
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	9e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-11
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	8e-08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-11
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-11
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	6e-08
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	9e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-11
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-10
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-09
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-10
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-10
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	9e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-10
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-09
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-10
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	5e-09
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	9e-09
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-06
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	3e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	5e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	8e-06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	5e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	7e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	7e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	8e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	1e-06
1ard_A	29	Yeast transcription factor ADR1; transcription reg	4e-06
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	8e-06
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	5e-05
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	2e-05
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	6e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	4e-05
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	6e-05
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	5e-05
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	7e-04
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	8e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  126 bits (319), Expect = 8e-35
 Identities = 71/226 (31%), Positives = 99/226 (43%), Gaps = 55/226 (24%)

Query: 173 TNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDR 232
           ++  A    +   E+ + C  C KSF R  HL  H RTHTGEKPY C  C K F+   D 
Sbjct: 7   SSSVAQA-ALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDL 65

Query: 233 IKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKT-ERERKLIFKCDLCGNILSS 291
            +H +                                  T E+     +KC  CG   S 
Sbjct: 66  TRHQR--------------------------------THTGEKP----YKCPECGKSFSQ 89

Query: 292 KHILQEHVRVVHMGLSRKYHYE--YKPDGVCDVCGE---YKKQLLQHKRLHFPLRPYACT 346
           +  L+ H R  H G       E  Y     C  CG+       L  H+R H   +PY C 
Sbjct: 90  RANLRAHQRT-HTG-------EKPYA----CPECGKSFSQLAHLRAHQRTHTGEKPYKCP 137

Query: 347 QCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +C K+F ++++L TH R HTGEKPY+C  CG+ F++ + +  H+RT
Sbjct: 138 ECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT 183

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  112 bits (283), Expect = 1e-29
 Identities = 60/202 (29%), Positives = 81/202 (40%), Gaps = 54/202 (26%)

Query: 197 SFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTR 256
           S               GEKPYAC  C K F++     +H +                   
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQR------------------- 42

Query: 257 YLNKHLHDAHPEAIKT-ERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYE-- 313
                          T E+     +KC  CG   S K  L  H R  H G       E  
Sbjct: 43  -------------THTGEKP----YKCPECGKSFSDKKDLTRHQR-THTG-------EKP 77

Query: 314 YKPDGVCDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           YK    C  CG+    +  L  H+R H   +PYAC +C K+F +  HL  H R HTGEKP
Sbjct: 78  YK----CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKP 133

Query: 371 YQCDICGRGFAQSNDMKKHRRT 392
           Y+C  CG+ F++ +++  H+RT
Sbjct: 134 YKCPECGKSFSREDNLHTHQRT 155

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  105 bits (264), Expect = 6e-27
 Identities = 68/239 (28%), Positives = 89/239 (37%), Gaps = 64/239 (26%)

Query: 141 KKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAHERKFPCTFCEKS 197
             S         G       K   C  C K  +   +LA H    H  E+ + C  C KS
Sbjct: 6   SSSSVAQAALEPG------EKPYACPECGKSFSRSDHLAEHQ-RTHTGEKPYKCPECGKS 58

Query: 198 FKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRY 257
           F  K  L  H RTHTGEKPY C  C K F+Q ++   H +                    
Sbjct: 59  FSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR-------------------- 98

Query: 258 LNKHLHDAHPEAIKT-ERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYE--Y 314
                         T E+     + C  CG   S    L+ H R  H G       E  Y
Sbjct: 99  ------------THTGEKP----YACPECGKSFSQLAHLRAHQR-THTG-------EKPY 134

Query: 315 KPDGVCDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
           K    C  CG+    +  L  H+R H   +PY C +C K+F +++ L  H R HTG+K 
Sbjct: 135 K----CPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 75.6 bits (187), Expect = 3e-16
 Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 10/110 (9%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAH 185
           Y C +C +++     L  H+R H G       K  +C  C K  +   +L  H    H  
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTG------EKPYKCPECGKSFSDKKDLTRHQR-THTG 74

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
           E+ + C  C KSF ++ +L+ H RTHTGEKPYAC  C K F+Q++    H
Sbjct: 75  EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAH 124

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 74.8 bits (185), Expect = 5e-16
 Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 10/110 (9%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAH 185
           Y C +C +++  + +L  H+R H G       K   C  C K  +   +L AH    H  
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTHTG------EKPYACPECGKSFSQLAHLRAHQR-THTG 130

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
           E+ + C  C KSF R+ +L  H RTHTGEKPY C  C K F++      H
Sbjct: 131 EKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 58.2 bits (142), Expect = 3e-10
 Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAH 185
           Y C +C +++     L  H+R H G       K  +C  C K  +   NL  H    H  
Sbjct: 106 YACPECGKSFSQLAHLRAHQRTHTG------EKPYKCPECGKSFSREDNLHTHQ-RTHTG 158

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKP 216
           E+ + C  C KSF R+  L VH RTHTG+K 
Sbjct: 159 EKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  101 bits (255), Expect = 9e-26
 Identities = 46/234 (19%), Positives = 73/234 (31%), Gaps = 64/234 (27%)

Query: 179 HNEVHAHERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYAC--YLCDKRFAQISDRIK 234
              +    +++ C+F  C  ++ +   L+ H   HTGEKP+ C    C+K F  +    +
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 235 HLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLI------FKCD--LCG 286
           H                                          L       F CD   C 
Sbjct: 63  H-----------------------------------------SLTHTGEKNFTCDSDGCD 81

Query: 287 NILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCG---EYKKQLLQHKRLHFPLRPY 343
              ++K  +++H         +   Y    +     CG   +   QL  H+  H    PY
Sbjct: 82  LRFTTKANMKKHFNR-FHN-IKICVYVCHFEN----CGKAFKKHNQLKVHQFSHTQQLPY 135

Query: 344 ACTQ--CDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHK 395
            C    CDK F   + L  H ++H G    + D C           KH    H+
Sbjct: 136 ECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 74.6 bits (184), Expect = 7e-16
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 331 LQHKRLHFPLRPYAC--TQCDKTFKKKNHLTTHYRIHTGEKPYQCD--ICGRGFAQSNDM 386
           +  K L    + Y C    C   + K   L  H   HTGEKP+ C    C +GF   + +
Sbjct: 1   MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHL 60

Query: 387 KKHRRT 392
            +H  T
Sbjct: 61  TRHSLT 66

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 63.4 bits (155), Expect = 6e-12
 Identities = 27/118 (22%), Positives = 40/118 (33%), Gaps = 6/118 (5%)

Query: 129 YPCDQ--CDRTYQTKKSLYVHRRAHLGI-VYRYKSKTDRCELCDKVVTNLAAHHNEVHAH 185
           + CD   CD  + TK ++  H      I +  Y    + C    K    L  H    H  
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF-SHTQ 131

Query: 186 ERKFPCT--FCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHN 241
           +  + C    C+K F     LK H + H G        C       +  +KH+   H 
Sbjct: 132 QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 22/115 (19%), Positives = 35/115 (30%), Gaps = 40/115 (34%)

Query: 129 YPCDQ--CDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHE 186
           +PC +  C++ + +   L  H   H G                                E
Sbjct: 43  FPCKEEGCEKGFTSLHHLTRHSLTHTG--------------------------------E 70

Query: 187 RKFPCT--FCEKSFKRKLHLKVHTRTHTGEK--PYACYL--CDKRFAQISDRIKH 235
           + F C    C+  F  K ++K H       K   Y C+   C K F + +    H
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVH 125

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 93.1 bits (232), Expect = 6e-23
 Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 8/120 (6%)

Query: 280 FKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGE---YKKQLLQHKRL 336
                C    S+ H L  HV + H+G   + ++    +  C   G+    K +L+ H R+
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE-CPREGKSFKAKYKLVNHIRV 84

Query: 337 HFPLRPYACT--QCDKTFKKKNHLTTHYRIHTGEKPYQCDI--CGRGFAQSNDMKKHRRT 392
           H   +P+ C    C K F +  +L  H R HTGEKP++C+   C R FA S+D KKH   
Sbjct: 85  HTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV 144

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 89.3 bits (222), Expect = 2e-21
 Identities = 45/117 (38%), Positives = 53/117 (45%), Gaps = 11/117 (9%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLG---IVYRYKSKTDRCELCDK---VVTNLAAHHNEV 182
            P   CDRT+ T   L  H             +    + C    K       L  H   V
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RV 84

Query: 183 HAHERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYACYL--CDKRFAQISDRIKH 235
           H  E+ FPC F  C K F R  +LK+H RTHTGEKP+ C    CD+RFA  SDR KH
Sbjct: 85  HTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH 141

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 79.3 bits (196), Expect = 8e-18
 Identities = 37/191 (19%), Positives = 55/191 (28%), Gaps = 49/191 (25%)

Query: 194 CEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTP 253
              S +              +       CD+ F+ + +                      
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHE---------------------- 40

Query: 254 LTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYE 313
               L  H+   H    +         +C   G    +K+ L  H+RV H G       E
Sbjct: 41  ----LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV-HTG-------E 88

Query: 314 YKPDGVCDV--CGEYKKQ------LLQHKRLHFPLRPYACT--QCDKTFKKKNHLTTHYR 363
            KP   C    CG   K       L  HKR H   +P+ C    CD+ F   +    H  
Sbjct: 89  -KPF-PCPFPGCG---KIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH 143

Query: 364 IHTGEKPYQCD 374
           +HT +K     
Sbjct: 144 VHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 77.3 bits (191), Expect = 3e-17
 Identities = 20/84 (23%), Positives = 27/84 (32%), Gaps = 9/84 (10%)

Query: 318 GVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQ----- 372
           G     G+  KQ L  K +           CD+TF   + L TH  +     P Q     
Sbjct: 1   GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 373 ----CDICGRGFAQSNDMKKHRRT 392
               C   G+ F     +  H R 
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRV 84

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 58.5 bits (142), Expect = 1e-10
 Identities = 26/98 (26%), Positives = 36/98 (36%), Gaps = 14/98 (14%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRC--ELCDKVVT---NLAAHHNEVH 183
             C +  ++++ K  L  H R H G       K   C    C K+     NL  H    H
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTG------EKPFPCPFPGCGKIFARSENLKIHK-RTH 115

Query: 184 AHERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYAC 219
             E+ F C F  C++ F      K H   HT +K    
Sbjct: 116 TGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 53.8 bits (130), Expect = 5e-09
 Identities = 6/47 (12%), Positives = 14/47 (29%)

Query: 348 CDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVH 394
              + +      +   I   +       C R F+  +++  H    H
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEH 49

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 88.7 bits (221), Expect = 4e-22
 Identities = 31/63 (49%), Positives = 44/63 (69%)

Query: 330 LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKH 389
           L +H R+H   +P+ C  C + F + +HLTTH R HTGEKP+ CDICGR FA+S++ K+H
Sbjct: 22  LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

Query: 390 RRT 392
            + 
Sbjct: 82  TKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 77.5 bits (192), Expect = 5e-18
 Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 2/54 (3%)

Query: 341 RPYAC--TQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           RPYAC    CD+ F +   LT H RIHTG+KP+QC IC R F++S+ +  H RT
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 56

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 69.0 bits (170), Expect = 6e-15
 Identities = 26/60 (43%), Positives = 38/60 (63%)

Query: 178 HHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLK 237
            H  +H  ++ F C  C ++F R  HL  H RTHTGEKP+AC +C ++FA+  +R +H K
Sbjct: 24  RHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 60.2 bits (147), Expect = 7e-12
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 186 ERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
           ER + C    C++ F +   L  H R HTG+KP+ C +C + F++      H
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH 53

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 55.9 bits (136), Expect = 2e-10
 Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 25/100 (25%)

Query: 280 FKCDL--CGNILSSKHILQEHVRVVHMGLSRKYHYE--YKPDGVCDVCGEYKKQ------ 329
           + C +  C    S    L  H+R+ H G       +  ++    C +C    +       
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRI-HTG-------QKPFQ----CRICM---RNFSRSDH 49

Query: 330 LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEK 369
           L  H R H   +P+AC  C + F + +    H +IH  +K
Sbjct: 50  LTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 55.9 bits (136), Expect = 3e-10
 Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 12/92 (13%)

Query: 129 YPC--DQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDK---VVTNLAAHHNEVH 183
           Y C  + CDR +    SL  H R H G       K  +C +C +      +L  H    H
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTG------QKPFQCRICMRNFSRSDHLTTHI-RTH 57

Query: 184 AHERKFPCTFCEKSFKRKLHLKVHTRTHTGEK 215
             E+ F C  C + F R    K HT+ H  +K
Sbjct: 58  TGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 87.9 bits (219), Expect = 9e-22
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 320 CDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC 376
           C+VCG+    K +L  H R H  ++PY C  CD      + L  H RIH+ E+P++C IC
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70

Query: 377 GRGFAQSNDMKKHRRT 392
                 S+ +  H R+
Sbjct: 71  PYASRNSSQLTVHLRS 86

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 79.4 bits (197), Expect = 1e-18
 Identities = 23/52 (44%), Positives = 29/52 (55%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
            P+ C  C K F +K+ L TH R HTG KPY+C  C    A S+ + KH R 
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI 58

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 75.2 bits (186), Expect = 4e-17
 Identities = 30/99 (30%), Positives = 40/99 (40%), Gaps = 17/99 (17%)

Query: 280 FKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYE--YKPDGVCDVCGE---YKKQLLQHK 334
            KC++CG   S K  L+ H+R  H G          YK    C  C         L +H 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRC-HTG-------VKPYK----CKTCDYAAADSSSLNKHL 56

Query: 335 RLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
           R+H   RP+ C  C    +  + LT H R HTG+     
Sbjct: 57  RIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 65.9 bits (162), Expect = 7e-14
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 10/94 (10%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAH 185
           + C+ C + +  K  L  H R H G       K  +C+ CD       +L  H   +H+ 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTG------VKPYKCKTCDYAAADSSSLNKHL-RIHSD 61

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
           ER F C  C  + +    L VH R+HTG+   + 
Sbjct: 62  ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 64.8 bits (159), Expect = 2e-13
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 165 CELCDKVVT---NLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYL 221
           CE+C K  +    L  H    H   + + C  C+ +      L  H R H+ E+P+ C +
Sbjct: 11  CEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69

Query: 222 CDKRFAQISDRIKH 235
           C       S    H
Sbjct: 70  CPYASRNSSQLTVH 83

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 63.2 bits (155), Expect = 7e-13
 Identities = 23/53 (43%), Positives = 23/53 (43%)

Query: 183 HAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
                   C  C K F RK  LK H R HTG KPY C  CD   A  S   KH
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH 55

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 44.3 bits (106), Expect = 3e-06
 Identities = 8/28 (28%), Positives = 17/28 (60%)

Query: 365 HTGEKPYQCDICGRGFAQSNDMKKHRRT 392
                P++C++CG+ F++ + +K H R 
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRC 30

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 86.4 bits (215), Expect = 3e-21
 Identities = 28/53 (52%), Positives = 39/53 (73%)

Query: 340 LRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           ++P+ C  C + F + +HLTTH R HTGEKP+ CDICGR FA+S++ K+HR  
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI 53

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 74.5 bits (184), Expect = 6e-17
 Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 10/78 (12%)

Query: 320 CDVCGEYKKQ------LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
           C +C    +       L  H R H   +P+AC  C + F + +    H  I     P   
Sbjct: 6   CRICM---RNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILE 61

Query: 374 DICGRGFAQSNDMKKHRR 391
           D      +++  ++    
Sbjct: 62  DKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 67.9 bits (167), Expect = 1e-14
 Identities = 23/47 (48%), Positives = 32/47 (68%)

Query: 189 FPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
           F C  C ++F R  HL  H RTHTGEKP+AC +C ++FA+  +R +H
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 50

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 59.4 bits (145), Expect = 1e-11
 Identities = 13/74 (17%), Positives = 23/74 (31%), Gaps = 3/74 (4%)

Query: 164 RCELCDKVVTNLA--AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYL 221
           +C +C +  +       H   H  E+ F C  C + F R    K H        P     
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILEDK 63

Query: 222 CDKRFAQISDRIKH 235
            ++  ++       
Sbjct: 64  VEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 54.0 bits (131), Expect = 9e-10
 Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 14/93 (15%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKV---VTNLAAHHNEVHAH 185
           + C  C R +     L  H R H G       K   C++C +          H + +  H
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTG------EKPFACDICGRKFARSDERKRHRD-IQ-H 55

Query: 186 ERKFPCTFCEKSFKRKLHLKVHT---RTHTGEK 215
                    E+   +  HL+      +   GE+
Sbjct: 56  ILPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 54.0 bits (131), Expect = 1e-09
 Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 27/101 (26%)

Query: 280 FKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYE--YKPDGVCDVCGEYKKQ------LL 331
           F+C +C    S    L  H+R  H G       E  +     CD+CG   ++        
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRT-HTG-------EKPFA----CDICG---RKFARSDERK 48

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTH---YRIHTGEK 369
           +H+ +   + P    + ++   K  HL       +   GE+
Sbjct: 49  RHRDIQ-HILPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 86.3 bits (215), Expect = 5e-21
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)

Query: 320 CDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC 376
           C  CG        LL H+R H   RPY C  C K F++++HL  H  IH+ EKP++C  C
Sbjct: 20  CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC 79

Query: 377 GRGFAQSNDMKKHRRT 392
           G+GF QS  +  H+  
Sbjct: 80  GKGFCQSRTLAVHKTL 95

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 70.9 bits (175), Expect = 2e-15
 Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 17/99 (17%)

Query: 280 FKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYE--YKPDGVCDVCGE---YKKQLLQHK 334
           F C  CG   +  + L  H R  H         E  Y     CD+C +    +  L  H+
Sbjct: 18  FICKFCGRHFTKSYNLLIHERT-HTD-------ERPYT----CDICHKAFRRQDHLRDHR 65

Query: 335 RLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
            +H   +P+ C +C K F +   L  H  +H        
Sbjct: 66  YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 65.5 bits (161), Expect = 1e-13
 Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 10/96 (10%)

Query: 143 SLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAHERKFPCTFCEKSFK 199
                R            K   C+ C +  T   NL  H    H  ER + C  C K+F+
Sbjct: 4   GSSGGRLPSKT------KKEFICKFCGRHFTKSYNLLIHE-RTHTDERPYTCDICHKAFR 56

Query: 200 RKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
           R+ HL+ H   H+ EKP+ C  C K F Q      H
Sbjct: 57  RQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH 92

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 62.1 bits (152), Expect = 2e-12
 Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 10/94 (10%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAH 185
           + C  C R +    +L +H R H         +   C++C K      +L  H   +H+ 
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTD------ERPYTCDICHKAFRRQDHLRDHRY-IHSK 70

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
           E+ F C  C K F +   L VH   H        
Sbjct: 71  EKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 85.6 bits (213), Expect = 5e-21
 Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 3/76 (3%)

Query: 320 CDVCG---EYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC 376
           C +CG   +    L  H  +H   RPY C  C K F +K+ +  H  IHTGEKP++C +C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 377 GRGFAQSNDMKKHRRT 392
           G+ F+QS+++  H R 
Sbjct: 64  GKAFSQSSNLITHSRK 79

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 75.9 bits (188), Expect = 1e-17
 Identities = 22/50 (44%), Positives = 31/50 (62%)

Query: 343 YACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           + C  C K+FK+ + L+TH  IH+  +PY C  CG+ F Q +DMKKH   
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI 51

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 65.1 bits (160), Expect = 9e-14
 Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 32/108 (29%)

Query: 128 TYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHER 187
           ++ C  C ++++   +L  H   H                                   R
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSD--------------------------------TR 28

Query: 188 KFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
            +PC +C K F +K  +K HT  HTGEKP+ C +C K F+Q S+ I H
Sbjct: 29  PYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH 76

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 56.3 bits (137), Expect = 1e-10
 Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 17/93 (18%)

Query: 280 FKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYE--YKPDGVCDVCGE---YKKQLLQHK 334
           F C +CG        L  H+ + H            Y     C  CG+    K  + +H 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLI-HSD-------TRPYP----CQYCGKRFHQKSDMKKHT 49

Query: 335 RLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTG 367
            +H   +P+ C  C K F + ++L TH R HTG
Sbjct: 50  FIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 85.2 bits (212), Expect = 5e-21
 Identities = 24/63 (38%), Positives = 37/63 (58%)

Query: 330 LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKH 389
              H  +    +PY C +C  +F+ K +L +H  +HTGEKPY+C+ICG  F +  ++K H
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

Query: 390 RRT 392
            R 
Sbjct: 65  TRI 67

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 65.9 bits (162), Expect = 4e-14
 Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 320 CDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPY 371
           CD C     YK  L  HK +H   +PY C  C   F +  +L TH RIH+GEKPY
Sbjct: 20  CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 61.3 bits (150), Expect = 2e-12
 Identities = 20/59 (33%), Positives = 33/59 (55%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
            HH+ +   ++ + C  C+ SF+ K +L  H   HTGEKPY C +C  +F + ++   H
Sbjct: 6   HHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 58.6 bits (143), Expect = 2e-11
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 357 HLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           H   H  +   +KPY+CD C   F    ++  H+  
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTV 39

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 53.6 bits (130), Expect = 1e-09
 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 10/78 (12%)

Query: 143 SLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAHERKFPCTFCEKSFK 199
             + H             K  +C+ C        NLA+H   VH  E+ + C  C   F 
Sbjct: 4   HHHHHSHMTHS------DKPYKCDRCQASFRYKGNLASHK-TVHTGEKPYRCNICGAQFN 56

Query: 200 RKLHLKVHTRTHTGEKPY 217
           R  +LK HTR H+GEKPY
Sbjct: 57  RPANLKTHTRIHSGEKPY 74

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 84.5 bits (210), Expect = 1e-20
 Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 2/67 (2%)

Query: 330 LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGE--KPYQCDICGRGFAQSNDMK 387
                R H   +PY C  C   F +   +  H      E    + C  C    A+ +D+ 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 388 KHRRTVH 394
            H R  H
Sbjct: 63  VHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 67.9 bits (167), Expect = 9e-15
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGE--KPYACYLCDKRFAQISDRIKHL 236
               H+ E+ + C  C   F +   +K+H      E    + C  CD   A+ SD   HL
Sbjct: 6   SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65

Query: 237 KSSH 240
           +  H
Sbjct: 66  RKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 64.1 bits (157), Expect = 2e-13
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 357 HLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
              +  R H+GEKPY+C IC   F QS  MK H   
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQ 37

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 60.2 bits (147), Expect = 5e-12
 Identities = 25/103 (24%), Positives = 34/103 (33%), Gaps = 33/103 (32%)

Query: 203 HLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHL 262
                 RTH+GEKPY CY+C  RF Q                             +  H+
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGT--------------------------MKMHI 35

Query: 263 HDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMG 305
              H E +         F C  C  +++ K  L  H+R  H  
Sbjct: 36  LQKHTENVAK-------FHCPHCDTVIARKSDLGVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 57.1 bits (139), Expect = 6e-11
 Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 6/58 (10%)

Query: 320 CDVCGE---YKKQLLQHKRLH--FPLRPYACTQCDKTFKKKNHLTTHYR-IHTGEKPY 371
           C +C         +  H        +  + C  CD    +K+ L  H R  H+   P 
Sbjct: 18  CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 16/91 (17%), Positives = 24/91 (26%), Gaps = 31/91 (34%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERK 188
           Y C  C   +    ++ +H                                     +  K
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHT------------------------------ENVAK 45

Query: 189 FPCTFCEKSFKRKLHLKVHTRT-HTGEKPYA 218
           F C  C+    RK  L VH R  H+   P +
Sbjct: 46  FHCPHCDTVIARKSDLGVHLRKQHSYSGPSS 76

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 86.1 bits (214), Expect = 2e-20
 Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 19/127 (14%)

Query: 280 FKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQ--------LL 331
            + D C     S+  L  H+   H+   RK   E+     C   G  ++         L+
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERK---EFV----CHWGGCSRELRPFKAQYMLV 56

Query: 332 QHKRLHFPLRPYACT--QCDKTFKKKNHLTTHYRIHTGEKPYQC--DICGRGFAQSNDMK 387
            H R H   +P+ CT   C K++ +  +L TH R HTGEKPY C  + C + F+ ++D  
Sbjct: 57  VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRA 116

Query: 388 KHRRTVH 394
           KH+   H
Sbjct: 117 KHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 78.4 bits (194), Expect = 1e-17
 Identities = 39/127 (30%), Positives = 50/127 (39%), Gaps = 22/127 (17%)

Query: 129 YPCDQCDRTYQTKKSLYVH---RRAHLGIVYRYKSKTDRCELCDKVVT--------NLAA 177
              D C + + +++ L  H      H         K   C                 L  
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGE------RKEFVCHWGGCSRELRPFKAQYMLVV 57

Query: 178 HHNEVHAHERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYAC--YLCDKRFAQISDRI 233
           H    H  E+   CTF  C KS+ R  +LK H R+HTGEKPY C    C K F+  SDR 
Sbjct: 58  HM-RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRA 116

Query: 234 KHLKSSH 240
           KH   +H
Sbjct: 117 KHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 73.4 bits (181), Expect = 8e-16
 Identities = 46/201 (22%), Positives = 64/201 (31%), Gaps = 67/201 (33%)

Query: 214 EKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTE 273
           E       C + F      + H+ S H                         H E     
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEH------------------------IHGE----R 32

Query: 274 RERKLIFKCDLCGNILSSKH-----ILQEHVRVVHMGLSRKYHYE--YKPDGVCDV--CG 324
           +E    F C   G     +      +L  H+R  H G       E  +K    C    C 
Sbjct: 33  KE----FVCHWGGCSRELRPFKAQYMLVVHMRR-HTG-------EKPHK----CTFEGCR 76

Query: 325 EYKKQ------LLQHKRLHFPLRPYACTQ--CDKTFKKKNHLTTH-YRIHTGEKPYQCDI 375
              K       L  H R H   +PY C    C K F   +    H  R H+ EKPY C +
Sbjct: 77  ---KSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKL 133

Query: 376 --CGRGFAQSNDMKKHRRTVH 394
             C + +   + ++KH +TVH
Sbjct: 134 PGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 60.3 bits (147), Expect = 3e-11
 Identities = 38/124 (30%), Positives = 50/124 (40%), Gaps = 22/124 (17%)

Query: 129 YPCDQCDRTYQTKK-----SLYVHRRAHLGIVYRYKSKTDRC--ELCDKVVT---NLAAH 178
           + C     + + +       L VH R H G       K  +C  E C K  +   NL  H
Sbjct: 35  FVCHWGGCSRELRPFKAQYMLVVHMRRHTG------EKPHKCTFEGCRKSYSRLENLKTH 88

Query: 179 HNEVHAHERKFPCTF--CEKSFKRKLHLKVH-TRTHTGEKPYACYL--CDKRFAQISDRI 233
               H  E+ + C    C K+F        H  RTH+ EKPY C L  C KR+   S   
Sbjct: 89  L-RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLR 147

Query: 234 KHLK 237
           KH+K
Sbjct: 148 KHVK 151

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 48.0 bits (115), Expect = 6e-07
 Identities = 10/58 (17%), Positives = 16/58 (27%), Gaps = 8/58 (13%)

Query: 186 ERKFPCTFCEKSFKRKLHLKVH---TRTHTGEKPYACYLCD-----KRFAQISDRIKH 235
           E       C + F  +  L  H      H   K + C+        + F      + H
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH 58

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 46.0 bits (110), Expect = 3e-06
 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 15/94 (15%)

Query: 129 YPCD--QCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCE--LCDK---VVTNLAAHHNE 181
           + C    C ++Y   ++L  H R+H G       K   CE   C K     ++ A H N 
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSHTG------EKPYMCEHEGCSKAFSNASDRAKHQNR 121

Query: 182 VHAHERKFPCTF--CEKSFKRKLHLKVHTRTHTG 213
            H++E+ + C    C K +     L+ H +T  G
Sbjct: 122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 84.9 bits (211), Expect = 3e-20
 Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 20/123 (16%)

Query: 280 FKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYE--YKPDGVCDVCGE---YKKQLLQHK 334
            +C  C     SK+ L+ H R  H G       E  ++    C  CG+    K+ LL+H+
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRK-HTG-------EKPFE----CPKCGKCYFRKENLLEHE 55

Query: 335 RL---HFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRR 391
                +   + + C+ C +TF+++  L  H   HTGE PY+C  C + F Q  D++ H  
Sbjct: 56  ARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI 115

Query: 392 TVH 394
            +H
Sbjct: 116 KLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 81.8 bits (203), Expect = 4e-19
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 11/117 (9%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHH--NEVH 183
             C  C + + +K  L VH R H G       K   C  C K      NL  H   N ++
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTG------EKPFECPKCGKCYFRKENLLEHEARNCMN 61

Query: 184 AHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSH 240
             E+ F C+ C+++F+R++ L++H  +HTGE PY C  C ++F Q  D   H+   H
Sbjct: 62  RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 76.4 bits (189), Expect = 3e-17
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIH 399
               C  C K F  K +L  H R HTGEKP++C  CG+ + +  ++ +H        ++
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEAR---NCMN 61

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 71.0 bits (175), Expect = 3e-15
 Identities = 34/164 (20%), Positives = 50/164 (30%), Gaps = 48/164 (29%)

Query: 211 HTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAI 270
            +G     C  C K+F        H +                                 
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNR--------------------------------K 29

Query: 271 KT-ERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGE---Y 326
            T E+     F+C  CG     K  L EH     M      +   +    C VC E    
Sbjct: 30  HTGEKP----FECPKCGKCYFRKENLLEHEARNCM------NRSEQV-FTCSVCQETFRR 78

Query: 327 KKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTH-YRIHTGEK 369
           + +L  H   H    PY C+ C + F +K  L +H  ++H+G  
Sbjct: 79  RMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 49.8 bits (120), Expect = 7e-08
 Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 14/94 (14%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRA---HLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEV 182
           + C +C + Y  K++L  H      +         +   C +C +       L  H    
Sbjct: 36  FECPKCGKCYFRKENLLEHEARNCMNRS------EQVFTCSVCQETFRRRMELRLHM-VS 88

Query: 183 HAHERKFPCTFCEKSFKRKLHLKVH-TRTHTGEK 215
           H  E  + C+ C + F +K  L+ H  + H+G  
Sbjct: 89  HTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 43.3 bits (103), Expect = 1e-05
 Identities = 7/28 (25%), Positives = 11/28 (39%)

Query: 365 HTGEKPYQCDICGRGFAQSNDMKKHRRT 392
            +G    +C  C + F     +K H R 
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRK 29

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 82.9 bits (206), Expect = 4e-20
 Identities = 24/64 (37%), Positives = 34/64 (53%)

Query: 329 QLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKK 388
              + +      R Y C +C K+F   + L+ H R HTGEKPY+CD CG+ F Q + +  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 389 HRRT 392
           H R 
Sbjct: 65  HHRV 68

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 64.8 bits (159), Expect = 1e-13
 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)

Query: 320 CDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPY 371
           CD CG+   +   L +H+R H   +PY C +C K F +++HL  H+R+HTG  P 
Sbjct: 21  CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 63.2 bits (155), Expect = 5e-13
 Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 174 NLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRI 233
           +            R++ C  C KSF     L  H RTHTGEKPY C  C K F Q S  I
Sbjct: 5   SSGRSE-WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63

Query: 234 KH 235
            H
Sbjct: 64  GH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 50.1 bits (121), Expect = 2e-08
 Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 10/78 (12%)

Query: 143 SLYVHRRAHLGIVYRYKSKTDRCELCDKV---VTNLAAHHNEVHAHERKFPCTFCEKSFK 199
           S                 +  +C+ C K     ++L+ H    H  E+ + C  C K+F 
Sbjct: 5   SSGRSEWQQRE------RRRYKCDECGKSFSHSSDLSKHR-RTHTGEKPYKCDECGKAFI 57

Query: 200 RKLHLKVHTRTHTGEKPY 217
           ++ HL  H R HTG  P 
Sbjct: 58  QRSHLIGHHRVHTGSGPS 75

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 82.5 bits (205), Expect = 5e-20
 Identities = 24/63 (38%), Positives = 37/63 (58%)

Query: 330 LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKH 389
                 +H   +PY C +C K F + + L  H R+HTGEKPY+C  CG+ F+Q++ +  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 390 RRT 392
           +R 
Sbjct: 62  QRI 64

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 65.2 bits (160), Expect = 7e-14
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 320 CDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPY 371
           C  CG+       L+QH+R+H   +PY C +C K F + + L  H RIHT     
Sbjct: 17  CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 61.7 bits (151), Expect = 1e-12
 Identities = 25/57 (43%), Positives = 32/57 (56%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
            + +H+ E+ + C  C K+F R   L  H R HTGEKPY C  C K F+Q S  I H
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 50.5 bits (122), Expect = 9e-09
 Identities = 20/78 (25%), Positives = 25/78 (32%), Gaps = 10/78 (12%)

Query: 144 LYVHRRAHLGIVYRYKSKTDRCELCDKV---VTNLAAHHNEVHAHERKFPCTFCEKSFKR 200
                  H G       K   C  C K     + L  H   VH  E+ + C  C K+F +
Sbjct: 2   SSGSSGIHSG------EKPYGCVECGKAFSRSSILVQHQ-RVHTGEKPYKCLECGKAFSQ 54

Query: 201 KLHLKVHTRTHTGEKPYA 218
              L  H R HT      
Sbjct: 55  NSGLINHQRIHTSGPSSG 72

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 43.6 bits (104), Expect = 3e-06
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 204 LKVHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
               +  H+GEKPY C  C K F++ S  ++H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQH 33

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 81.8 bits (203), Expect = 7e-20
 Identities = 21/54 (38%), Positives = 32/54 (59%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVH 394
           R + C  C + F ++ HL  HYR HT EKPY C +C R F + + + +H + +H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 67.1 bits (165), Expect = 1e-14
 Identities = 23/52 (44%), Positives = 32/52 (61%)

Query: 189 FPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSH 240
           F C  C ++F R+ HLK H R+HT EKPY C LC++ F +    I+H +  H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)

Query: 319 VCDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHY-RIHTGEK 369
           VC+VC      ++ L +H R H   +PY C  C++ F +++ L  H  +IH+G  
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.9 bits (97), Expect = 2e-05
 Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 33/88 (37%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERK 188
           + C+ C R +  ++ L  H R+H                                  E+ 
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTN--------------------------------EKP 30

Query: 189 FPCTFCEKSFKRKLHLKVHT-RTHTGEK 215
           +PC  C ++F R+  L  H  + H+G  
Sbjct: 31  YPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 82.9 bits (206), Expect = 9e-20
 Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 327 KKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDM 386
           K Q  +H  +H  LRPY C  C K FK K+HL  H +IHTG KPY+C+IC + F   +  
Sbjct: 22  KSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF 81

Query: 387 KKHRRT 392
             HR  
Sbjct: 82  --HRHV 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 74.4 bits (184), Expect = 1e-16
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 16/107 (14%)

Query: 280 FKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGE---YKKQLLQHKRL 336
           + C  CG   + K     H+ + H+GL        +P G C VCG+    K  L+ H ++
Sbjct: 11  YPCQ-CGKSFTHKSQRDRHMSM-HLGL--------RPYG-CGVCGKKFKMKHHLVGHMKI 59

Query: 337 HFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQS 383
           H  ++PY C  C K F  ++    H  + +  K Y+     +   ++
Sbjct: 60  HTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEA 104

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 62.5 bits (153), Expect = 2e-12
 Identities = 24/105 (22%), Positives = 38/105 (36%), Gaps = 13/105 (12%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT---NLAAHHNEVHAH 185
           YPC QC +++  K     H   HLG       +   C +C K      +L  H   +H  
Sbjct: 11  YPC-QCGKSFTHKSQRDRHMSMHLG------LRPYGCGVCGKKFKMKHHLVGHMK-IHTG 62

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQIS 230
            + + C  C K F  +     H    +  K Y     ++   + S
Sbjct: 63  IKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEAS 105

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 61.7 bits (151), Expect = 4e-12
 Identities = 24/59 (40%), Positives = 29/59 (49%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
             H  +H   R + C  C K FK K HL  H + HTG KPY C +C KRF       +H
Sbjct: 26  DRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 44.0 bits (105), Expect = 5e-06
 Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 1/30 (3%)

Query: 363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
              +G+K Y C  CG+ F   +   +H   
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSM 31

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 37.8 bits (89), Expect = 7e-04
 Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 6/76 (7%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERK 188
           Y C  C + ++ K  L  H + H GI      K   C +C K      + H  V +  + 
Sbjct: 38  YGCGVCGKKFKMKHHLVGHMKIHTGI------KPYECNICAKRFMWRDSFHRHVTSCTKS 91

Query: 189 FPCTFCEKSFKRKLHL 204
           +     E++       
Sbjct: 92  YEAAKAEQNTTEASGP 107

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 82.5 bits (205), Expect = 1e-19
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 5/80 (6%)

Query: 320 CDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGE--KPYQCD 374
           C++CG+       L +HK  H   +PY+C  C   FK+K+ ++ H R H G   KPY C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69

Query: 375 ICGRGFAQSNDMKKHRRTVH 394
            CG+GF++ + +  H + VH
Sbjct: 70  SCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 78.7 bits (195), Expect = 2e-18
 Identities = 21/51 (41%), Positives = 27/51 (52%)

Query: 342 PYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
             AC  C K F+   HL  H   H+GEKPY C +CG  F + + M  H R+
Sbjct: 7   GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS 57

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 63.3 bits (155), Expect = 6e-13
 Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 6/82 (7%)

Query: 164 RCELCDKV---VTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGE--KPYA 218
            CE+C K+   V +L  H    H+ E+ + C  C   FKRK  +  H R+H G   KPY 
Sbjct: 9   ACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 219 CYLCDKRFAQISDRIKHLKSSH 240
           C  C K F++      H+K  H
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 60.2 bits (147), Expect = 8e-12
 Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 20/98 (20%)

Query: 280 FKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYE--YKPDGVCDVCGE---YKKQLLQHK 334
             C++CG I    + L  H    H G       E  Y     C VCG     K ++  H 
Sbjct: 8   VACEICGKIFRDVYHLNRHKLS-HSG-------EKPYS----CPVCGLRFKRKDRMSYHV 55

Query: 335 RLHF--PLRPYACTQCDKTFKKKNHLTTHY-RIHTGEK 369
           R H     +PY C  C K F + +HL  H  ++H+G  
Sbjct: 56  RSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 59.8 bits (146), Expect = 1e-11
 Identities = 30/123 (24%), Positives = 40/123 (32%), Gaps = 33/123 (26%)

Query: 183 HAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNF 242
            +      C  C K F+   HL  H  +H+GEKPY+C +C  RF +      H       
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH------- 54

Query: 243 DFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVV 302
                               HD      K        + C  CG   S    L  H++ V
Sbjct: 55  -----------------VRSHDG--SVGKP-------YICQSCGKGFSRPDHLNGHIKQV 88

Query: 303 HMG 305
           H G
Sbjct: 89  HSG 91

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 44.4 bits (106), Expect = 3e-06
 Identities = 7/28 (25%), Positives = 14/28 (50%)

Query: 365 HTGEKPYQCDICGRGFAQSNDMKKHRRT 392
            +G     C+ICG+ F     + +H+ +
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLS 29

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 38.2 bits (90), Expect = 4e-04
 Identities = 18/88 (20%), Positives = 27/88 (30%), Gaps = 31/88 (35%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERK 188
           Y C  C   ++ K  +  H R+H G                              +  + 
Sbjct: 36  YSCPVCGLRFKRKDRMSYHVRSHDG------------------------------SVGKP 65

Query: 189 FPCTFCEKSFKRKLHLKVHT-RTHTGEK 215
           + C  C K F R  HL  H  + H+G  
Sbjct: 66  YICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 83.0 bits (206), Expect = 1e-19
 Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)

Query: 329 QLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI--CGRGFAQSNDM 386
           QL +H+R H  ++P+ C  C + F + +HL TH R HTGEKP+ C    C + FA+S+++
Sbjct: 53  QLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDEL 112

Query: 387 KKHRRT 392
            +H   
Sbjct: 113 VRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 81.4 bits (202), Expect = 5e-19
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 330 LLQHKRLHFPLRPYACT--QCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMK 387
           L  H R H   +PY C    C++ F + + L  H R HTG KP+QC  C R F++S+ +K
Sbjct: 24  LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLK 83

Query: 388 KHRRT 392
            H RT
Sbjct: 84  THTRT 88

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 72.9 bits (180), Expect = 5e-16
 Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 16/116 (13%)

Query: 129 YPCDQ--CDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCEL--CDK---VVTNLAAHHNE 181
           + C    C++ Y     L +H R H G       K  +C+   C++       L  H   
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTG------EKPYQCDFKDCERRFSRSDQLKRHQR- 59

Query: 182 VHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYL--CDKRFAQISDRIKH 235
            H   + F C  C++ F R  HLK HTRTHTGEKP++C    C K+FA+  + ++H
Sbjct: 60  RHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 45.2 bits (108), Expect = 2e-06
 Identities = 32/169 (18%), Positives = 56/169 (33%), Gaps = 66/169 (39%)

Query: 212 TGEKPYAC--YLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEA 269
           + ++P+ C    C+KR+ ++S    H +                                
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSR-------------------------------- 29

Query: 270 IKT-ERERKLIFKCDL--CGNILSSKHILQEHVRVVHMGLSRKYHYE--YKPDGVCDVCG 324
             T E+     ++CD   C    S    L+ H R  H G          ++    C  C 
Sbjct: 30  KHTGEKP----YQCDFKDCERRFSRSDQLKRHQRR-HTG-------VKPFQ----CKTCQ 73

Query: 325 EYKKQ------LLQHKRLHFPLRPYAC--TQCDKTFKKKNHLTTHYRIH 365
              ++      L  H R H   +P++C    C K F + + L  H+ +H
Sbjct: 74  ---RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 5/29 (17%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 366 TGEKPYQCD--ICGRGFAQSNDMKKHRRT 392
           + ++P+ C    C + + + + ++ H R 
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRK 30

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 14/90 (15%)

Query: 129 YPCD--QCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDK---VVTNLAAHHNEVH 183
           Y CD   C+R +     L  H+R H G       K  +C+ C +      +L  H    H
Sbjct: 37  YQCDFKDCERRFSRSDQLKRHQRRHTG------VKPFQCKTCQRKFSRSDHLKTHT-RTH 89

Query: 184 AHERKFPCTF--CEKSFKRKLHLKVHTRTH 211
             E+ F C +  C+K F R   L  H   H
Sbjct: 90  TGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 79.9 bits (198), Expect = 6e-19
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 330 LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGE----KPYQCDICGRGFAQSND 385
                R H   +PYAC+ CDKTF++K  L  H++ +         + C  CG+ F + N 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 386 MKKHRRT 392
           M +H   
Sbjct: 63  MARHADN 69

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 76.0 bits (188), Expect = 2e-17
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 7/68 (10%)

Query: 320 CDVCGE---YKKQLLQHKRLH----FPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQ 372
           C  C +    K+ L  H + +    F    + C++C KTF ++N +  H     G    +
Sbjct: 18  CSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE 77

Query: 373 CDICGRGF 380
            +  G   
Sbjct: 78  GENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 62.9 bits (154), Expect = 7e-13
 Identities = 16/98 (16%), Positives = 29/98 (29%), Gaps = 28/98 (28%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERK 188
           Y C  CD+T++ K+ L +H + +    +   +                            
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAA---------------------------- 47

Query: 189 FPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRF 226
           F C+ C K+F R+  +  H     G             
Sbjct: 48  FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 55.6 bits (135), Expect = 3e-10
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 357 HLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
              +  R HTGEKPY C  C + F Q   +  H + 
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKR 37

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 4/63 (6%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHT----GEKPYACYLCDKRFAQISDR 232
                 H  E+ + C+ C+K+F++K  L +H + +         + C  C K F + +  
Sbjct: 4   GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTM 63

Query: 233 IKH 235
            +H
Sbjct: 64  ARH 66

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 18/35 (51%), Positives = 18/35 (51%)

Query: 203 HLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLK 237
                 RTHTGEKPYAC  CDK F Q      H K
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK 36

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 79.5 bits (197), Expect = 6e-19
 Identities = 15/52 (28%), Positives = 27/52 (51%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
            P  C++C  +   K  L  H RIH  ++P++C+ C     Q +++ KH + 
Sbjct: 8   HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 67.1 bits (165), Expect = 2e-14
 Identities = 16/56 (28%), Positives = 25/56 (44%)

Query: 182 VHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLK 237
             +      C+ C  S   K  L++H R H  ++P+ C  C     Q S+  KH+K
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 63.3 bits (155), Expect = 4e-13
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 320 CDVCGE---YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
           C  C      K  L  H+R+H   RP+ C  C    K+ ++L+ H +   G+     
Sbjct: 12  CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 48.6 bits (117), Expect = 5e-08
 Identities = 15/92 (16%), Positives = 26/92 (28%), Gaps = 32/92 (34%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERK 188
             C +C  +  +K +L +H R H                                  +R 
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCT--------------------------------DRP 37

Query: 189 FPCTFCEKSFKRKLHLKVHTRTHTGEKPYACY 220
           F C +C    K+  +L  H +   G+      
Sbjct: 38  FKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 5/30 (16%), Positives = 10/30 (33%)

Query: 363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
              +   P +C  C    +    ++ H R 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERI 31

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 4/27 (14%), Positives = 8/27 (29%)

Query: 209 RTHTGEKPYACYLCDKRFAQISDRIKH 235
            + +   P  C  C    +  +    H
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIH 28

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 78.4 bits (194), Expect = 1e-18
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 334 KRLHFPLRPYACTQCDKTFKKKNHLTTHYRI--HTGEKPYQCDICGRGFAQSNDMKKHRR 391
           +        Y C  C + +   ++   HY        K Y C  C + F + ++M  H +
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

Query: 392 TVHK 395
            +HK
Sbjct: 62  IIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 61.8 bits (151), Expect = 9e-13
 Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 183 HAHERKFPCTFCEKSFKRKLHLKVHTRT--HTGEKPYACYLCDKRFAQISDRIKHLKSSH 240
              E  + C  C + +    +   H  T      K Y C  C K F +  +   H+K  H
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 164 RCELCDKVVT---NLAAHH-NEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTG 213
           RC++C +V T   N   H+      + + +PC FC K F RK ++  H +    
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 5/53 (9%)

Query: 320 CDVCGEYKKQ---LLQHKR--LHFPLRPYACTQCDKTFKKKNHLTTHYRIHTG 367
           C VC           +H        ++ Y C  C K F +K+++T H +I   
Sbjct: 13  CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 33/95 (34%)

Query: 209 RTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPE 268
            T  GE  Y C +C + +  IS+  +H  +SH                            
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSH---------------------------- 34

Query: 269 AIKTERERKLIFKCDLCGNILSSKHILQEHVRVVH 303
                  +   + C  C    + K  +  HV+++H
Sbjct: 35  ---KRNVKV--YPCPFCFKEFTRKDNMTAHVKIIH 64

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 79.9 bits (198), Expect = 2e-18
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 20/122 (16%)

Query: 280 FKCDL--CGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGE---YKKQLLQHK 334
             C    C  +      +++H+           H   +   VC  CG+      +L +H+
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHT---------HGP-RVH-VCAECGKAFVESSKLKRHQ 54

Query: 335 RLHFPLRPYACT--QCDKTFKKKNHLTTHYRIHTGEKPYQCDI--CGRGFAQSNDMKKHR 390
            +H   +P+ CT   C K F    +L TH RIHTG++PY C    C + FAQS ++K H 
Sbjct: 55  LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114

Query: 391 RT 392
            T
Sbjct: 115 LT 116

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 65.2 bits (160), Expect = 3e-13
 Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 17/117 (14%)

Query: 128 TYPCDQ--CDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKV---VTNLAAHHNEV 182
           T  C    C + ++   ++  H   H   V+        C  C K     + L  H   V
Sbjct: 5   TIACPHKGCTKMFRDNSAMRKHLHTHGPRVHV-------CAECGKAFVESSKLKRHQ-LV 56

Query: 183 HAHERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYACYL--CDKRFAQISDRIKH 235
           H  E+ F CTF  C K F    +L+ H R HTG++PY C    C+K+FAQ ++   H
Sbjct: 57  HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 113

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 60.2 bits (147), Expect = 2e-11
 Identities = 38/170 (22%), Positives = 48/170 (28%), Gaps = 59/170 (34%)

Query: 214 EKPYACYL--CDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIK 271
            +  AC    C K F   S   KH                         H H        
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKH------------------------LHTHGPRV---- 34

Query: 272 TERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYE--YKPDGVCDV--CGE-- 325
                     C  CG        L+ H  V H G       E  ++    C    CG+  
Sbjct: 35  --------HVCAECGKAFVESSKLKRHQLV-HTG-------EKPFQ----CTFEGCGKRF 74

Query: 326 -YKKQLLQHKRLHFPLRPYAC--TQCDKTFKKKNHLTTHYRIHTGEKPYQ 372
                L  H R+H   RPY C    C+K F +  +L +H   H   K  Q
Sbjct: 75  SLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 53.3 bits (129), Expect = 4e-09
 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 14/96 (14%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCEL--CDKVVT---NLAAHHNEVH 183
           + C +C + +     L  H+  H G       K  +C    C K  +   NL  H   +H
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTG------EKPFQCTFEGCGKRFSLDFNLRTHV-RIH 87

Query: 184 AHERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPY 217
             +R + C F  C K F +  +LK H  TH   K  
Sbjct: 88  TGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 78.7 bits (195), Expect = 2e-18
 Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 5/78 (6%)

Query: 320 CDVCG-EYKK--QLLQHKRLHFPLRPYACT--QCDKTFKKKNHLTTHYRIHTGEKPYQCD 374
              CG  Y K   L  H R H   +PY C    C   F + + LT HYR HTG +P+QC 
Sbjct: 10  YAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ 69

Query: 375 ICGRGFAQSNDMKKHRRT 392
            C R F++S+ +  H + 
Sbjct: 70  KCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 66.0 bits (162), Expect = 6e-14
 Identities = 26/111 (23%), Positives = 35/111 (31%), Gaps = 34/111 (30%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERK 188
                C +TY     L  H R H G                                E+ 
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTG--------------------------------EKP 35

Query: 189 FPCT--FCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLK 237
           + C    C   F R   L  H R HTG +P+ C  CD+ F++      H+K
Sbjct: 36  YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMK 86

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 62.2 bits (152), Expect = 2e-12
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 185 HERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYAC--YLCDKRFAQISDRIKH 235
                 C +  C K++ +  HLK H RTHTGEKPY C    C  +FA+  +  +H
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRH 56

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 46.4 bits (111), Expect = 4e-07
 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 15/98 (15%)

Query: 273 ERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKK---- 328
           +R          CG   +    L+ H+R  H G  + YH        CD  G   K    
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRT-HTG-EKPYH--------CDWDGCGWKFARS 50

Query: 329 -QLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIH 365
            +L +H R H   RP+ C +CD+ F + +HL  H + H
Sbjct: 51  DELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 78.2 bits (193), Expect = 2e-18
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHT---GEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ 397
               C  C  T ++K  L  H R H        + C+ CG+ F + + +  HR   H A 
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 398 IHAVEDK 404
           + A ++ 
Sbjct: 66  LLAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 67.0 bits (164), Expect = 2e-14
 Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 3/58 (5%)

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHT---GEKPYACYLCDKRFAQISDRIKHLKSSH 240
                C  C  + ++K  L  H R H        + C  C KRF +      H   SH
Sbjct: 5   SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 55.1 bits (133), Expect = 4e-10
 Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 6/60 (10%)

Query: 320 CDVCGE---YKKQLLQHKRLHFPL---RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
           C++CG     K  L  H+R H        + C  C K F+K + +  H            
Sbjct: 10  CEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 50.9 bits (122), Expect = 1e-08
 Identities = 19/91 (20%), Positives = 26/91 (28%), Gaps = 29/91 (31%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERK 188
             C+ C  T + K SL  H+R H                         A          +
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKH---------------------AETVA--------ALR 38

Query: 189 FPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
           FPC FC K F++   +  H          A 
Sbjct: 39  FPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 49.7 bits (119), Expect = 3e-08
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query: 365 HTGEKPYQCDICGRGFAQSNDMKKHRRT 392
            +G    QC+ICG    Q   +  H+R 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRK 29

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 15/93 (16%), Positives = 21/93 (22%), Gaps = 32/93 (34%)

Query: 211 HTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAI 270
            +G     C +C     Q +    H +                      KH         
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQR----------------------KH--------- 30

Query: 271 KTERERKLIFKCDLCGNILSSKHILQEHVRVVH 303
             E    L F C+ CG        +  H    H
Sbjct: 31  -AETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 77.3 bits (191), Expect = 9e-18
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 330 LLQHKRLHFPLRPYACT--QCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMK 387
           L  H R H   +PY CT   CD  F + + LT HYR HTG KP+QC +C R F++S+ + 
Sbjct: 33  LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA 92

Query: 388 KHRRT 392
            H + 
Sbjct: 93  LHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 65.3 bits (160), Expect = 2e-13
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 8/86 (9%)

Query: 159 KSKTDRCEL--CDKVVT---NLAAHHNEVHAHERKFPCTF--CEKSFKRKLHLKVHTRTH 211
           K +   C+   C KV T   +L AH    H  E+ + CT+  C+  F R   L  H R H
Sbjct: 12  KRRIHYCDYPGCTKVYTKSSHLKAH-LRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH 70

Query: 212 TGEKPYACYLCDKRFAQISDRIKHLK 237
           TG KP+ C +C++ F++      H+K
Sbjct: 71  TGAKPFQCGVCNRSFSRSDHLALHMK 96

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 46.5 bits (111), Expect = 7e-07
 Identities = 26/91 (28%), Positives = 33/91 (36%), Gaps = 12/91 (13%)

Query: 128 TYPCD--QCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRC--ELCDKVVTNLA--AHHNE 181
            + CD   C + Y     L  H R H G       K  +C  E CD           H  
Sbjct: 15  IHYCDYPGCTKVYTKSSHLKAHLRTHTG------EKPYKCTWEGCDWRFARSDELTRHYR 68

Query: 182 VHAHERKFPCTFCEKSFKRKLHLKVHTRTHT 212
            H   + F C  C +SF R  HL +H + H 
Sbjct: 69  KHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 12/38 (31%), Positives = 22/38 (57%)

Query: 329 QLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHT 366
           +L +H R H   +P+ C  C+++F + +HL  H + H 
Sbjct: 62  ELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 72.3 bits (178), Expect = 3e-16
 Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 2/54 (3%)

Query: 341 RPYACT--QCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           RPYAC    CD+ F + + LT H RIHTG+KP+QC IC R F++S+ +  H RT
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 63.1 bits (154), Expect = 5e-13
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 179 HNEVHAHERKFPCT--FCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHL 236
            N V    R + C    C++ F R   L  H R HTG+KP+ C +C + F++      H+
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69

Query: 237 K 237
           +
Sbjct: 70  R 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.0 bits (107), Expect = 1e-06
 Identities = 16/38 (42%), Positives = 24/38 (63%)

Query: 329 QLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHT 366
           +L +H R+H   +P+ C  C + F + +HLTTH R HT
Sbjct: 36  ELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 42.3 bits (100), Expect = 9e-06
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHT 212
           H  +H  ++ F C  C ++F R  HL  H RTHT
Sbjct: 40  HIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 69.7 bits (171), Expect = 2e-15
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)

Query: 327 KKQLLQHKRLHFPLRPYACTQ--CDKTFKKKNHLTTHYRIHTGEKPYQCDI--CGRGFAQ 382
                  +     +R + C+   C KT+ K +HL  H R HTGEKP+ C    C R FA+
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 383 SNDMKKHRRT 392
           S+++ +HRRT
Sbjct: 62  SDELSRHRRT 71

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 62.8 bits (153), Expect = 5e-13
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)

Query: 179 HNEVHAHERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYAC--YLCDKRFAQISDRIK 234
                +  R   C+   C K++ +  HLK HTRTHTGEKP++C    C++RFA+  +  +
Sbjct: 8   PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67

Query: 235 HLKS 238
           H ++
Sbjct: 68  HRRT 71

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 69.6 bits (171), Expect = 3e-15
 Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 329 QLLQHKRLHFPLRPYACTQ--CDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDM 386
           QL  H+  H    PY C    CDK F   + L  H ++H G    + D C          
Sbjct: 18  QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY 77

Query: 387 KKHRRTVH 394
            KH    H
Sbjct: 78  LKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 59.2 bits (144), Expect = 1e-11
 Identities = 19/81 (23%), Positives = 26/81 (32%), Gaps = 6/81 (7%)

Query: 165 CELCDKVVT---NLAAHHNEVHAHERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYAC 219
            E C K       L  H    H  +  + C    C+K F     LK H + H G      
Sbjct: 6   FENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64

Query: 220 YLCDKRFAQISDRIKHLKSSH 240
             C       +  +KH+   H
Sbjct: 65  DSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 58.0 bits (141), Expect = 4e-11
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 4/51 (7%)

Query: 189 FPCTF--CEKSFKRKLHLKVHTRTHTGEKPYAC--YLCDKRFAQISDRIKH 235
           + C F  C K+FK+   LKVH  +HT + PY C    CDKRF+  S   +H
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH 52

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 69.1 bits (170), Expect = 3e-15
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 5/57 (8%)

Query: 341 RPYACT--QCDKTFKKKNHLTTHYRI-HTGEKPYQCD--ICGRGFAQSNDMKKHRRT 392
               C    C + F  + +L  H +  H  +K + C    CG+ F     +K+H + 
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKL 62

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 67.6 bits (166), Expect = 1e-14
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)

Query: 330 LLQHKRL-HFPLRPYACTQ--CDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGF 380
           L  HK+  H   + ++C +  C K+F  K HL  H ++H+  + Y C+  G   
Sbjct: 25  LNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 66.4 bits (163), Expect = 3e-14
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 183 HAHERKFPCTF--CEKSFKRKLHLKVHTR-THTGEKPYAC--YLCDKRFAQISDRIKH 235
            +     PC F  C + F  + +L  H +  H  +K ++C    C K F       +H
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH 59

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 65.6 bits (161), Expect = 7e-14
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 174 NLAAHHNEVHAHERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRF 226
            L  H    H H++ F C    C KSF  K HLK H + H+  + Y C       
Sbjct: 24  YLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 2/32 (6%)

Query: 365 HTGEKPYQCDI--CGRGFAQSNDMKKHRRTVH 394
            +G     CD   CGR F+    +  H++  H
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH 33

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 7/32 (21%), Positives = 10/32 (31%), Gaps = 2/32 (6%)

Query: 211 HTGEKPYACYL--CDKRFAQISDRIKHLKSSH 240
            +G     C    C + F+       H K  H
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH 33

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 68.4 bits (168), Expect = 4e-15
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHY-RIHTGEKPYQCDICGRGFAQ 382
                   +PY C  C K F + +HL  H  ++HT E+P++C +   G + 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 59.1 bits (144), Expect = 7e-12
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHT-RTHTGEKPYACYLCDKRFAQ 228
                +  + + C  C K F R  HL  H  + HT E+P+ C +     + 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 50.3 bits (121), Expect = 9e-09
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVH 394
           +     +  KPY C  CG+GF++ + +  H + VH
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSH 240
              + +  KPY C  C K F++      H+K  H
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C+ C K+F KK+ L  H RIHTGE P   
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 5e-10
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C+ C KSF +K  L VH R HTGE P   
Sbjct: 1   GSSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C  CG+ F + + +  H+R 
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRI 34

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 206 VHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
               + TGEKPY C  C K F + S    H
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVH 31

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C  C K+F+  + LT H RIHTGEKP   
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 16/43 (37%), Positives = 19/43 (44%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C KSF+    L VH R HTGEKP   
Sbjct: 1   GSSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 6e-09
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+CD+C + F   + +  H+R 
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRI 34

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C +C K F   S    H
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVH 31

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD 374
                    +PY+C  C K F    HL  H R+HT E      
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 12/43 (27%), Positives = 15/43 (34%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K+F    HL  H R HT E     
Sbjct: 1   GSSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
                TGEKPY C++CG+ F  S  + +H R 
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV 34

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY+C +C K F   +   +H
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQH 31

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 18/42 (42%), Positives = 22/42 (52%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C +C K F +K +LT H RIHTGEKP   
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K+F +K +L  H R HTGEKP   
Sbjct: 1   GSSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C  CG+ FAQ  ++ +H+R 
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRI 34

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K FAQ ++  +H
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQH 31

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C +C K F+  ++LTTH  IHTGEKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K+F+   +L  H   HTGEKP   
Sbjct: 1   GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C+ CG+ F   +++  H+  
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVI 34

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F   S+   H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTH 31

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 5e-14
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C++C K F +  HL  H RIHTG +P   
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.3 bits (124), Expect = 3e-09
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  + E+ + C+ C K+F R  HL  H R HTG +P   
Sbjct: 1   GSSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     +GEKPY+C  CG+ F +   + +HRR 
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRI 34

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + +GEKPY C  C K F + +   +H
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEH 31

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 64.9 bits (159), Expect = 6e-14
 Identities = 18/42 (42%), Positives = 20/42 (47%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    RPY C +C K FK K+ L  H R HTGEKP   
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 5e-10
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    +R + C  C K+FK K  L  H R+HTGEKP   
Sbjct: 1   GSSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.6 bits (122), Expect = 7e-09
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TG++PY+C  CG+ F   + +  HRR+
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRS 34

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TG++PY C  C K F   S  I H
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICH 31

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 6e-14
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C  C K F     LT H R+H+GEKP   
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K+F     L  H R H+GEKP   
Sbjct: 1   GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+CD+C + F+    + +H+R 
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRV 34

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 206 VHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
               + TGEKPY C +C K F+  +   +H
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQH 31

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 6e-14
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C+ C K+F KK+ L  H +IHTGEKP   
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C+ C KSF +K  L VH + HTGEKP   
Sbjct: 1   GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C ICG+ F + + +  H++ 
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQI 34

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 206 VHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
               + TGEKPY C +C K F + S    H
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVH 31

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 6e-14
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    R Y C++C K F +K+ L+ H RIH GEKP   
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 178 HHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                   ER + C+ C K+F +K  L +H R H GEKP   
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGE+ Y+C  CG+ F Q + +  H+R 
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRI 34

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGE+ Y C  C K F Q S    H
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMH 31

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 7e-14
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C  C K F+  +HL  H+ +H+GE+P   
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K+F+   HL  H   H+GE+P   
Sbjct: 1   GSSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRR 391
                TGEKPY+C +CG+ F  S+ + +H  
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHS 33

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C +C K F   S  ++H
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQH 31

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 8e-14
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C +C K F+  ++L+ H RIHTGEKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 6e-09
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  E+ + C  C K F+   +L  H R HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C+ CG+ F  ++ + +H+R 
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRI 34

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 8e-06
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F   S   +H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRH 31

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 8e-14
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C QC K F  ++ LTTH  IHTG+KP   
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K+F  +  L  H   HTG+KP   
Sbjct: 1   GSSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C+ CG+ F+  + +  H+  
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI 34

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F+  S    H
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTH 31

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.0 bits (157), Expect = 9e-14
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C +C K F++ +HL  H  IHTGEKP   
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 3e-09
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K F+R  HL  H   HTGEKP   
Sbjct: 1   GSSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C  CG+ F +++ + +H+  
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLI 34

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 9e-06
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C+ C K F + S   +H
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARH 31

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 9e-14
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +P+ C +C K F + +HL +H R+HTGEKP   
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 6e-10
 Identities = 16/43 (37%), Positives = 19/43 (44%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  + E+ F C  C K F +  HL  H R HTGEKP   
Sbjct: 1   GSSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 6e-09
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     +GEKP+QC+ CG+ F Q++ +  H+R 
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV 34

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + +GEKP+ C  C KRF Q S    H
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSH 31

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 9e-14
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C +C K+F +K+HL  H RIHTGEKP   
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 7e-10
 Identities = 17/43 (39%), Positives = 20/43 (46%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C KSF +K HL  H R HTGEKP   
Sbjct: 1   GSSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 6e-09
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY C+ CG+ F Q + + +HRR 
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRI 34

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F Q S   +H
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRH 31

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 64.1 bits (157), Expect = 9e-14
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    + Y C +C K F + + L+ H +IHTGEKP   
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+++ C  C K F R   L  H + HTGEKP   
Sbjct: 1   GSSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 10/32 (31%), Positives = 22/32 (68%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRR 391
           +     TGEK Y+C+ CG+ F++++ + +H++
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQK 33

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEK Y C  C K F++ S   +H
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQH 31

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    R Y C++C K F +K+ L  H RIHTGEKP   
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 3e-10
 Identities = 17/43 (39%), Positives = 21/43 (48%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    ER + C+ C K+F RK  L +H R HTGEKP   
Sbjct: 1   GSSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGE+ Y+C  CG+ FA+ + +  H+R 
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRI 34

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGE+ Y C  C K FA+ S  I H
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMH 31

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K F + +HLT H+RIHTGEKP   
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.3 bits (124), Expect = 4e-09
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  + E+ + C  C K F +  HL  H R HTGEKP   
Sbjct: 1   GSSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     +GEKPY+C+ CG+ F Q++ +  H R 
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRI 34

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + +GEKPY C  C K F Q S    H
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNH 31

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                     PY C +C K F +K  L +H R H GEKP   
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 16/43 (37%), Positives = 18/43 (41%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E  + C  C K+F RK  L  H RTH GEKP   
Sbjct: 1   GSSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGE PY+C  CG+ F++   +  H+RT
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRT 34

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 206 VHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
               + TGE PY C+ C K F++    I H
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISH 31

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   + Y C  C K F + +HL TH R+HTGEKP   
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 13/33 (39%), Positives = 22/33 (66%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +      GEK Y+CD+CG+ F+QS+ ++ H+R 
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV 34

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K F +  HL+ H R HTGEKP   
Sbjct: 1   GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 9e-07
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 206 VHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
               +  GEK Y C +C K F+Q S    H
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTH 31

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    + + CT+C K F +K+ L+ H +IHTGEKP   
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 4e-10
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                     + F CT C K+F RK  L +H + HTGEKP   
Sbjct: 1   GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 8/33 (24%), Positives = 17/33 (51%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TG K ++C  CG+ F + + +  H++ 
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKI 34

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TG K + C  C K F + S    H
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMH 31

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K +  K +L  H ++HTGE+P   
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K +  K +L +H + HTGE+P   
Sbjct: 1   GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C+ CG+G+    ++  H++ 
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKV 34

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K +    +   H
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMH 31

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C+ C K F  +  L+ H RIH+G+KP   
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C+ C K+F  +  L VH R H+G+KP   
Sbjct: 1   GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
                TGEKPY+C +CG+ F+    +  H+R 
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRI 34

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 206 VHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
               + TGEKPY C +C K F+       H
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVH 31

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +P+ C +C K F++  HL +H RIHTGEKP   
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  + E+ F C  C K+F++ +HL  H R HTGEKP   
Sbjct: 1   GSSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 3e-08
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     +GEKP++C  CG+ F Q+  +  H R 
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRI 34

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 8e-06
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + +GEKP+ C  C K F Q      H
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASH 31

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   + + C +C KTF + + LT H RIHTGEKP   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  A ++ F C  C+K+F +   L VH R HTGEKP   
Sbjct: 1   GSSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +      G+K ++C+ C + F QS+ +  H+R 
Sbjct: 2   SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRI 34

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              +  G+K + C  C K F Q S    H
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVH 31

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K F + +HL  H  IHTGEKP   
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 9e-09
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TG+KPY+C+ CG+ F Q++ + +HR  
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGI 34

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 9e-09
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    ++ + C  C K F +  HL  H   HTGEKP   
Sbjct: 1   GSSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 206 VHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
               + TG+KPY C  C K F Q S   +H
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARH 31

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K F + +HL  H RIHTG KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  E+ + C  C K F +  HL  H R HTG KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C+ CG+ F Q++ +  H+R 
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRI 34

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 13/29 (44%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F Q S    H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANH 31

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 2e-13
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C+ C K F +K+ L  H + HTGE+    
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 7e-10
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C+ C K+F RK  L +H ++HTGE+    
Sbjct: 1   GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C  CG+ F + + +  H+++
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS 34

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F + S    H
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIH 31

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +P+ CT C K+F+ K +L TH RIHTGEK    
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 53.7 bits (130), Expect = 5e-10
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    ++ F CT C KSF+ K +L  H R HTGEK    
Sbjct: 1   GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TG+KP++C  CG+ F    ++  H+R 
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRI 34

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TG+KP+ C  C K F    + + H
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTH 31

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 2e-13
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    RPY CT C K F  +++L  H +IHTGEKP   
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.3 bits (124), Expect = 4e-09
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGE+PY C +CG+ F   +++ KH++ 
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKI 34

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  ER + CT C K+F  + +L  H + HTGEKP   
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 8e-07
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGE+PY C +C K F   S+ IKH
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKH 31

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C KTF +K+ L+ H R HTGEKP   
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 7e-10
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 178 HHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                 + E+ + C  C K+F +K  L  H RTHTGEKP   
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     +GEKPY C+ CG+ F+Q + +  H+RT
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRT 34

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 206 VHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
               + +GEKPY C  C K F+Q S    H
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAH 31

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                  ++PY C+QC KTF  K+ L  H R HTG KP   
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                     + + C+ C K+F  K  L VH R+HTG KP   
Sbjct: 1   GSSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TG KPY C  C + F+  + +  H+R+
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRS 34

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TG KPY C  C K F+  S  I H
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C  C K F +K HL  H + HTGEKP   
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 8e-10
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K+F +K HL  H +THTGEKP   
Sbjct: 1   GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C +C + F Q   + +H++T
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKT 34

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C +C K F Q +   +H
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQH 31

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 16/42 (38%), Positives = 17/42 (40%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C  C K F     L  H RIHTGEKP   
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 6e-09
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     +GEKPY CD CG+ F  S ++ +H+R 
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRI 34

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                + E+ + C +C K+F     L  H R HTGEKP   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + +GEKPY C  C K F   ++ ++H
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRH 31

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C+ C K+F  K+ L  H + HTGE+    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C+ C KSF  K  L++H + HTGE+    
Sbjct: 1   GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C  CG+ F   + ++ H++ 
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKC 34

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 12/29 (41%), Positives = 13/29 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F   S    H
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIH 31

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C +C K F +  HL  H R+HTGEKP   
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K+F +  HL  H R HTGEKP   
Sbjct: 1   GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C  CG+ F+Q+  + +H+R 
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRV 34

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F+Q +  I+H
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQH 31

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +P+ C  C K F     L  H RIHTGEKP   
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 5e-10
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ F C  C K+F   + L  H R HTGEKP   
Sbjct: 1   GSSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKP+ C  CG+ F+    + +HRR 
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRI 34

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKP+ C  C K F+      +H
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQH 31

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 2e-13
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD 374
                   +P+ C  C K+F  ++ L  H  +HT EKP    
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ F C  C KSF  +  L  H+  HT EKP   
Sbjct: 1   GSSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 2e-09
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKP++CDICG+ F   + + +H   
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMV 34

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 206 VHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
               + TGEKP+ C +C K F   S   +H
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRH 31

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 3e-13
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    RP+ C +C K+F +  HL  H RIHTGEKP   
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 7e-10
 Identities = 17/43 (39%), Positives = 18/43 (41%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    ER   C  C KSF +  HL  H R HTGEKP   
Sbjct: 1   GSSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGE+P++C+ CG+ F QS  + +H+R 
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRI 34

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGE+P+ C  C K F Q +  I+H
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQH 31

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.0 bits (154), Expect = 3e-13
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C++C K F  K++L  H R H+GEKP   
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  A E+ + C+ C K+F  K +L +H RTH+GEKP   
Sbjct: 1   GSSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.9 bits (120), Expect = 9e-09
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +      GEKPY C  CG+ F+  + +  H RT
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRT 34

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              +  GEKPY C  C K F+  S  I H
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIH 31

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 3e-13
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +P+ C +C K++ ++ HLT H R+HTGEKP   
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 6e-10
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ F C  C KS+ +++HL  H R HTGEKP   
Sbjct: 1   GSSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKP++C  CG+ + Q   + +H+R 
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV 34

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKP+ C  C K + Q     +H
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQH 31

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 3e-13
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   ++PY C +C K F   + LTTH  IHTGEKP   
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 12/43 (27%), Positives = 15/43 (34%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                     + + C  C K+F     L  H   HTGEKP   
Sbjct: 1   GSSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TG KPY C+ CG+ F+  + +  H+  
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVI 34

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 8e-06
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TG KPY C  C K F+  S    H
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTH 31

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 3e-13
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K F + +HL  H  IHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 6e-09
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K F +  HL  H   HTGEKP   
Sbjct: 1   GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C+ CG+ F Q++ + +HR  
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGI 34

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F Q S   +H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARH 31

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.6 bits (153), Expect = 3e-13
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C +C K F+ ++ L  H   H+GEKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 8e-10
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K+F+ +  L +H  TH+GEKP   
Sbjct: 1   GSSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C+ CG+ F   + +  H+ T
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQAT 34

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 12/29 (41%), Positives = 13/29 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F   S    H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIH 31

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 3e-13
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD 374
                   +PY C +C K +K++  L  H R+HTGEK     
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                + E+ + C  C K +KR+L L  H R HTGEK    
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 7e-09
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     +GEKPY+C  CG+G+ +  D+  H+R 
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRV 34

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + +GEKPY C  C K + +  D   H
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFH 31

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 62.5 bits (153), Expect = 3e-13
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +P+ C +C K+F   + L TH RIHTGEKP   
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 16/41 (39%), Positives = 17/41 (41%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  E+ F C  C KSF     L  H R HTGEKP   
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKP++C  CG+ F+ S+ +  H+R 
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRI 34

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKP+ C  C K F+  S    H
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATH 31

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 62.5 bits (153), Expect = 4e-13
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                  ++PY C +C K F+ K++L  H R HTGE     
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                     + + C  C K+F+ K +L +HTRTHTGE   + 
Sbjct: 1   GSSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TG KPY C+ CG+ F   + +  H RT
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRT 34

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 12/29 (41%), Positives = 13/29 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TG KPY C  C K F   S  I H
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIH 31

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.6 bits (153), Expect = 4e-13
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +P+ C +C K+F   + L  H RIHTGE P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 7e-09
 Identities = 15/41 (36%), Positives = 16/41 (39%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  E+   C  C KSF     L VH R HTGE P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKP++C  CG+ F+ ++ +  H+R 
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRI 34

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKP+ C  C K F+  S  I H
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVH 31

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 4e-13
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C  C K + ++ +L  H R+H GEK    
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 9e-10
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  + E+ + C  C K + R+L+L +H R H GEK    
Sbjct: 1   GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 9e-09
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     + EKPY+C+ CG+G+ +  ++  H+R 
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV 34

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + + EKPY C  C K + +  +   H
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMH 31

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 4e-13
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K F + + L  H RIHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 178 HHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                   E+ + C  C K+F +   L  H R HTGEKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 13/33 (39%), Positives = 23/33 (69%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C+ CG+ F+Q++ + +H+R 
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRI 34

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F+Q S   +H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARH 31

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 62.5 bits (153), Expect = 4e-13
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +P+ C +C K F +++ L  H+++HTGEKP   
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 53.7 bits (130), Expect = 5e-10
 Identities = 16/43 (37%), Positives = 19/43 (44%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ F C  C K F R+  L VH + HTGEKP   
Sbjct: 1   GSSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKP++C  CG+GF++ + +  H + 
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKL 34

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKP+ C  C K F++ S    H
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVH 31

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 62.2 bits (152), Expect = 4e-13
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                  + PY C+QC+K+F  K  L  H R+HT EKP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 18/41 (43%), Positives = 20/41 (48%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                A    + C+ CEKSF  KL L VH R HT EKP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 8/33 (24%), Positives = 14/33 (42%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +      G  PY+C  C + F+    +  H+R 
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRM 34

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              +  G  PY C  C+K F+     + H
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVH 31

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 4e-13
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K F + +HL  H R+HTG KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K F +  HL  H R HTG KP   
Sbjct: 1   GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 14/33 (42%), Positives = 22/33 (66%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C+ CG+ F Q++ + +HRR 
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRV 34

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F Q S   +H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARH 31

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 62.2 bits (152), Expect = 4e-13
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K F  +  L TH+ +HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C+ CG+GF    D+  H   
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMV 34

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K F  +  L  H   HTGEKP   
Sbjct: 1   GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/29 (41%), Positives = 13/29 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F    D   H
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTH 31

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 4e-13
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K F + +HL  H  IHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  E+ + C  C K F +  HL  H   HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C+ CG+ F Q++ + +HR  
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI 34

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F Q S  ++H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRH 31

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 5e-13
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K F   + L  H RIHTGEKP   
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  E+ + C  C K+F     L+ H R HTGEKP   
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY C+ CG+ F   + +++H+R 
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI 34

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F   S   +H
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEH 31

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 62.1 bits (152), Expect = 5e-13
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K F  K++L  H R HTGE     
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 8e-10
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C+K+F  K +L VH RTHTGE   + 
Sbjct: 1   GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C+ C + F   +++  H+RT
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRT 34

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 206 VHTRTHTGEKPYACYLCDKRFAQISDRIKH 235
               + TGEKPY C  C K F   S+ + H
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVH 31

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 62.2 bits (152), Expect = 5e-13
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K+F+  + L  H R+H+GEKP   
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 50.6 bits (122), Expect = 6e-09
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY C  CG+ F  ++ + KH+R 
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRV 34

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C KSF+    L  H R H+GEKP   
Sbjct: 1   GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F   S  +KH
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKH 31

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 5e-13
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    P+ C++C K F  K +L  H +IHTGE+P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 9e-10
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  E  F C+ C K F  K +L +H + HTGE+P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGE P+ C  CG+ F    ++  H++ 
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQKI 34

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGE P+ C  C K F   ++ I H
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIH 31

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 5e-13
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +P+ C +C K F + + L +H R+HTGEKP   
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  + E+ F C  C K F +   L  H R HTGEKP   
Sbjct: 1   GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 11/33 (33%), Positives = 21/33 (63%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     +GEKP++C+ CG+ F Q++ +  H+R 
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRV 34

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + +GEKP+ C  C KRF Q S    H
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSH 31

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 6e-13
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K F + + L  H R+HTGEKP   
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 7e-09
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 178 HHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    + + C  C K+F +   L  H R HTGEKP   
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 13/33 (39%), Positives = 22/33 (66%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TG KPYQC+ CG+ F+Q++ + +H+R 
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRV 34

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TG KPY C  C K F+Q S   +H
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARH 31

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 7e-13
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C +C K F  +++L TH +IHTGEKP   
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 3e-09
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K+F  + +L  H + HTGEKP   
Sbjct: 1   GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 9e-09
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C  CG+ F   +++  H++ 
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI 34

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F   S+   H
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTH 31

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 7e-13
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   + Y C +C K+F +   L  H R+H+GEKP   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C KSF R   L  H R H+GEKP   
Sbjct: 1   GSSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 6e-09
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEK Y C  CG+ F+++  + KH R 
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERL 34

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEK Y C  C K F++    +KH
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKH 31

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 7e-13
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K F  +++L  H +IHT +KP   
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 5e-09
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K+F  + +L  H + HT +KP   
Sbjct: 1   GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 6e-09
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY C  CG+ F   +++ KH++ 
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKI 34

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 14/29 (48%), Positives = 16/29 (55%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F   S+ IKH
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKH 31

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 7e-13
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   RP+ C +C K F +++HL  H R+H+ EK    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                + ER F C  C K F R+ HL  H R H+ EK    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     +GE+P++C+ CG+GF + + +  H R 
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRL 34

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + +GE+P+ C  C K F + S    H
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGH 31

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 7e-13
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    RPY C +C K F + +HL  H + H  EK    
Sbjct: 2   SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  + ER + C  C K+F R  HL  H + H  EK    
Sbjct: 1   GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
                +GE+PY C+ CG+ F + + + +H + 
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKR 34

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 8e-06
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKHLK 237
              + +GE+PY C  C K F + S  I+HLK
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLK 33

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.3 bits (150), Expect = 8e-13
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +P+ C++C K F  K++L  H R HTGEKP   
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.6 bits (130), Expect = 4e-10
 Identities = 18/43 (41%), Positives = 23/43 (53%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ F C+ C+K+F  K +L VH RTHTGEKP   
Sbjct: 1   GSSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 6e-09
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKP++C  C + F   +++  H+RT
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRT 34

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKP+ C  C K F   S+ I H
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVH 31

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 2e-12
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    +PY C++C K+F     LT H+  HT EKP   
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  E+ + C+ C KSF     L  H  THT EKP   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +      GEKPYQC  CG+ F+ S  + +H  T
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWIT 34

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              +  GEKPY C  C K F+      +H
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQH 31

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.7 bits (148), Expect = 2e-12
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K F   +  T H R+HTG++P   
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    E+ + C  C K+F        H R HTG++P   
Sbjct: 1   GSSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKPY+C  CG+ F  ++   +H+R 
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRL 34

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKPY C  C K F   S   +H
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQH 31

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C KTF +  HL  H R+HTGE+    
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  + ++ + C  C K+F +  HL  H R HTGE+    
Sbjct: 1   GSSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     +G+KPY+C  C + F Q   + +H+R 
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRV 34

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + +G+KPY C  C K F QI    +H
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQH 31

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 60.3 bits (147), Expect = 2e-12
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICG 377
                    +P+ C +C K F   +   +H R H+GEKP      G
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.6 bits (127), Expect = 1e-09
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  + E+ F C  C K F        H R+H+GEKP   
Sbjct: 1   GSSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 11/33 (33%), Positives = 21/33 (63%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     +GEKP++C+ CG+GF  ++    H+R+
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRS 34

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + +GEKP+ C  C K F   S    H
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSH 31

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
           +P+ C+ C+K F  K++L  H + H  EKP   
Sbjct: 9   KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 182 VHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
             + E+ F C+ CEK+F  K +L VH +TH  EKP   
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query: 363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
              +GEKP+ C  C + F+  + +  H++T
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQT 32

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 208 TRTHTGEKPYACYLCDKRFAQISDRIKH 235
           +   +GEKP+ C  C+K F+  S  + H
Sbjct: 2   SSGSSGEKPFGCSCCEKAFSSKSYLLVH 29

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 59.9 bits (146), Expect = 3e-12
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   + + C +CD  F + + L  H  +H GEKP   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  E+ + C  C+  F +   L++H   H GEKP   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 8/33 (24%), Positives = 17/33 (51%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +      GEK ++C  C   F+Q++ ++ H+  
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNV 34

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              +  GEK + C  CD  F+Q S    H
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLH 31

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 59.5 bits (145), Expect = 4e-12
 Identities = 15/39 (38%), Positives = 18/39 (46%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPY 371
                   +PY C QC K F +K  L  H R+HTG  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
                 GEKPY+CD CG+ F+Q   +  H R 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRV 33

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYA 218
            +     E+ + C  C K+F +K  L VH R HTG  P +
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
            + +  GEKPY C  C K F+Q    I H
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVH 30

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.5 bits (145), Expect = 4e-12
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    + + C +C + F  K+HL  H RIHTGEKP   
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 5e-09
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                +  +   C  C + F  K HL  H R HTGEKP   
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     +  K +QC  CGRGF   + + +H+R 
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRI 34

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 6/29 (20%), Positives = 12/29 (41%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + +  K + C+ C + F   S   +H
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQH 31

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.1 bits (144), Expect = 6e-12
 Identities = 12/41 (29%), Positives = 15/41 (36%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +PY C +C K F  K+ L  H R H G      
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  + E+ + C  C K+F  K  L VH RTH G    + 
Sbjct: 1   GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.2 bits (121), Expect = 7e-09
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     +GEKPY+C+ CG+ F   + +  H RT
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERT 34

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + +GEKPY C  C K F   S  I H
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVH 31

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.7 bits (143), Expect = 7e-12
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    R + C+ C K F + ++   H RIHTGEKP   
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                    ER   C+ C K F +  +   H R HTGEKP   
Sbjct: 1   GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +      GE+ ++C  CG+ F Q+++  +HRR 
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRI 34

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              +  GE+ + C  C K F Q S+ I+H
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQH 31

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 9e-12
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                   +P  CT+C K F  K+ L  H R H  +K    
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  E+   CT C K+F  K  L +H RTH  +K    
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKP +C  CG+ F   + +  H+RT
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRT 34

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/29 (41%), Positives = 13/29 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGEKP  C  C K F   S  I H
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMH 31

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 58.3 bits (142), Expect = 9e-12
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                     PY C +C K F +K+ L +H + H+G+     
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  E  + C  C K F RK  L  H +TH+G+   + 
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGE PY+C  CG+ F++ + +  H++T
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKT 34

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + TGE PY C  C K F++    + H
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSH 31

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYR-IHTGEKPYQC 373
                    +PY C +C K F +   L  H+R  HTGEKP   
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 53.3 bits (129), Expect = 6e-10
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVH 394
           +     TG+KPY+C  CG+ F Q+  + +H R  H
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 47.2 bits (113), Expect = 9e-08
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTR-THTGEKPYAC 219
                    ++ + C  C K+F +   L  H R  HTGEKP   
Sbjct: 1   GSSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSH 240
              + TG+KPY C  C K F Q +  I+H +  H
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
            PY C++C K F +K+ L +H R H GE     
Sbjct: 9   NPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 183 HAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
            + E  + C+ C K+F RK  L  H RTH GE   + 
Sbjct: 5   SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 44.0 bits (105), Expect = 9e-07
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
              +GE PY+C  CG+ F + + +  H+RT
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRT 32

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 10/27 (37%), Positives = 12/27 (44%)

Query: 209 RTHTGEKPYACYLCDKRFAQISDRIKH 235
              +GE PY C  C K F +    I H
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISH 29

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 16/31 (51%), Positives = 20/31 (64%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPY 371
           R Y C +C K+F++K  LT H RIHTG  P 
Sbjct: 9   RVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 47.2 bits (113), Expect = 8e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYA 218
           +R + C  C KSF++K  L +H R HTG  P +
Sbjct: 8   QRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 363 RIHTGEKPYQCDICGRGFAQSNDMKKHRR 391
              +G++ Y+C  CG+ F Q   +  H R
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHER 31

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 8/28 (28%), Positives = 12/28 (42%)

Query: 208 TRTHTGEKPYACYLCDKRFAQISDRIKH 235
           +   +G++ Y C  C K F Q      H
Sbjct: 2   SSGSSGQRVYECQECGKSFRQKGSLTLH 29

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 13/39 (33%), Positives = 15/39 (38%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPY 371
                   +PY C  C   F +  HL  H  IHTG  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYA 218
            +     E+ + C  C   F +  HL+ H   HTG  P +
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
                 GEKPY+C+ CG  F Q   ++ H   
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLI 33

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
            + +  GEKPY C  C  RF Q++    H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAH 30

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 56.9 bits (138), Expect = 3e-11
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPY 371
            PY C QC K+F ++  L  H R  +   P 
Sbjct: 10  TPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 47.7 bits (114), Expect = 6e-08
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYA 218
            +     E  + C  C KSF ++  L VH R+ +   P +
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 43.8 bits (104), Expect = 1e-06
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
                 GE PY C  CG+ F Q   +  H+R+
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRS 33

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.4 bits (90), Expect = 9e-05
 Identities = 10/29 (34%), Positives = 12/29 (41%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
            + +  GE PY C  C K F Q      H
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVH 30

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 58.1 bits (140), Expect = 4e-11
 Identities = 23/94 (24%), Positives = 32/94 (34%), Gaps = 26/94 (27%)

Query: 280 FKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFP 339
                C    S+ H L  HV + H+G   + ++      VC                   
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNH------VCYWEE--------------- 64

Query: 340 LRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                C +  K+FK K  L  H R+HTGEK    
Sbjct: 65  -----CPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 52.3 bits (125), Expect = 5e-09
 Identities = 19/72 (26%), Positives = 24/72 (33%), Gaps = 11/72 (15%)

Query: 159 KSKTDRCELCDKVVTN---LAAHHNEVHAHERKFP--------CTFCEKSFKRKLHLKVH 207
              +   + CD+  +    L  H    H    +          C    KSFK K  L  H
Sbjct: 22  AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH 81

Query: 208 TRTHTGEKPYAC 219
            R HTGEK    
Sbjct: 82  IRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 44.6 bits (105), Expect = 2e-06
 Identities = 19/78 (24%), Positives = 25/78 (32%), Gaps = 9/78 (11%)

Query: 324 GEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHY-RIHTGEKPYQ--------CD 374
           G+  KQ L  K +           CD+TF   + L TH    H G             C 
Sbjct: 7   GQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP 66

Query: 375 ICGRGFAQSNDMKKHRRT 392
             G+ F     +  H R 
Sbjct: 67  REGKSFKAKYKLVNHIRV 84

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 55.4 bits (134), Expect = 1e-10
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 333 HKRLHFPLRPYACTQ--CDKTFKKKNHLTTHYRIHTGEKPYQCD 374
                   +P+ACT   C   F + + L+ H R H+G KP    
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 51.9 bits (125), Expect = 2e-09
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 179 HNEVHAHERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYAC 219
                  E+ F CT+  C   F R   L  H R+H+G KP   
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 48.1 bits (115), Expect = 5e-08
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 360 THYRIHTGEKPYQCD--ICGRGFAQSNDMKKHRRT 392
           +     TGEKP+ C    CG  F++S+++ +HRR+
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS 36

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.3 bits (134), Expect = 1e-10
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
                    + Y C +C K F +  HLT H +IHT +     
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.1 bits (105), Expect = 9e-07
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
                T  K Y C+ CG+ F +   + +H++ 
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKI 34

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 10/43 (23%), Positives = 16/43 (37%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                     + + C  C K+F R  HL  H + HT +   + 
Sbjct: 1   GSSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + T  K Y C  C K F +I    +H
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRH 31

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPY 371
                   +PY C  C   F+    L +H RIHTG  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 54.0 bits (131), Expect = 3e-10
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYA 218
            +     E+ +PC  C   F+    LK H R HTG  P +
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 52.9 bits (128), Expect = 8e-10
 Identities = 13/32 (40%), Positives = 15/32 (46%)

Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
                 GEKPY C+ICG  F     +K H R 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI 33

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKHL 236
            + +  GEKPY C +C  RF  +     HL
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHL 31

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 54.7 bits (131), Expect = 3e-10
 Identities = 17/50 (34%), Positives = 24/50 (48%)

Query: 343 YACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           Y C +C    KK + L  H R HT  +PY C  C   F    ++ KH ++
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 46.6 bits (110), Expect = 2e-07
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 319 VCDVCG---EYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEK 369
           +C+ CG   +    L +H R H  +RPY CT C+ +FK K +LT H +     K
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.9 bits (108), Expect = 4e-07
 Identities = 20/51 (39%), Positives = 26/51 (50%)

Query: 188 KFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKS 238
           K+ C  C    K+   LK H RTHT  +PY C  C+  F    +  KH+KS
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 39.3 bits (91), Expect = 9e-05
 Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 164 RCELCDKVVTNLA--AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEK 215
            CE C       +    H   H   R + CT+C  SFK K +L  H ++    K
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 11/42 (26%), Positives = 16/42 (38%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD 374
                   + + C +C K F   + L  H R+H GEK     
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.4 bits (116), Expect = 3e-08
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
                + E+   C  C K+F     L++H R H GEK    
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.6 bits (114), Expect = 6e-08
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
                +GEK + CD CG+ F   + ++ H+R 
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRV 34

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKH 235
              + +GEK + C  C K F  IS    H
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIH 31

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 9/43 (20%), Positives = 12/43 (27%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD 374
                    +P+ C +C   F     L  H R H    P    
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.7 bits (122), Expect = 5e-09
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +     TGEKP+QC  CG  F+ S  + KH R+
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS 34

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 10/44 (22%), Positives = 13/44 (29%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACY 220
                    E+ F C  C  +F     L  H R+H    P    
Sbjct: 1   GSSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.6 bits (101), Expect = 5e-06
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKHLKS 238
              + TGEKP+ C  C   F+      KHL+S
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS 34

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 59.9 bits (144), Expect = 9e-10
 Identities = 53/335 (15%), Positives = 99/335 (29%), Gaps = 75/335 (22%)

Query: 3   PKETTSI--KCEACHRTFSSPYE-YGGHKLKCNLFLVQTTDDSYIVPAISQQSE----ST 55
           P E  S+  K   C R    P E    +  + ++      D      A     +      
Sbjct: 300 PDEVKSLLLKYLDC-RPQDLPREVLTTNPRRLSIIAESIRDG----LATWDNWKHVNCDK 354

Query: 56  LKTKTRTSADDLETLEISNT-------PTSAANVENKTLPLTYPCAKTKTRTSADDLETL 108
           L T   +S + LE  E           P SA ++    L L +             +  L
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSA-HIPTILLSLIW--FDVIKSDVMVVVNKL 411

Query: 109 EISNTPTSAANVENKTLPLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRC--- 165
                  S    + K   ++ P    +   + +    +HR     IV  Y          
Sbjct: 412 HKY----SLVEKQPKESTISIPSIYLELKVKLENEYALHRS----IVDHYNIPKTFDSDD 463

Query: 166 ---ELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLC 222
                 D+   +   HH +   H  +         F R +                 +L 
Sbjct: 464 LIPPYLDQYFYSHIGHHLKNIEHPERM------TLF-RMV-----------------FL- 498

Query: 223 DKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKC 282
           D RF  +  +I+H  ++ N    S+ N    L  Y   ++ D  P     + ER +    
Sbjct: 499 DFRF--LEQKIRHDSTAWNAS-GSILNTLQQLKFY-KPYICDNDP-----KYERLV---N 546

Query: 283 DLCGNILSSKHIL--QEHVRVVHMGLSRKYHYEYK 315
            +   +   +  L   ++  ++ + L  +    ++
Sbjct: 547 AILDFLPKIEENLICSKYTDLLRIALMAEDEAIFE 581

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 51.9 bits (124), Expect = 2e-09
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 183 HAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLC 222
               ++  C  C K F+   HL  H  +H+GEKPY+    
Sbjct: 7   GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 51.1 bits (122), Expect = 5e-09
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC 376
           +  AC  C K F+   HL  H   H+GEKPY     
Sbjct: 11  KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 49.6 bits (119), Expect = 9e-09
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
             R  TG KP+QC  C R F++S+ +  HR+ 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 43.5 bits (103), Expect = 1e-06
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKHLK 237
            TR  TG KP+ C  CD+ F++      H K
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIH 365
             R    ++P+ C  CD++F + +HL  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 39.2 bits (92), Expect = 5e-05
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTH 211
                   + F C  C++SF R  HL +H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.2 bits (118), Expect = 2e-08
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC 373
           +PY+C +C +TF   N L  H ++HT +     
Sbjct: 9   KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.7 bits (101), Expect = 3e-06
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 183 HAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
            + E+ + C  C+++F     L  H + HT +   + 
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.5 bits (98), Expect = 8e-06
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
              +GEKPY C  C   F+ +N + +H++ 
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKM 32

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 208 TRTHTGEKPYACYLCDKRFAQISDRIKH 235
           +   +GEKPY+C  C + F+  +  ++H
Sbjct: 2   SSGSSGEKPYSCAECKETFSDNNRLVQH 29

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 48.5 bits (115), Expect = 6e-08
 Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 7/64 (10%)

Query: 329 QLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKK 388
              + +++H   R   C++C   F             +  K   C+ C +   Q   + K
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNK 57

Query: 389 HRRT 392
               
Sbjct: 58  DEGN 61

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 43.1 bits (101), Expect = 5e-06
 Identities = 12/76 (15%), Positives = 24/76 (31%), Gaps = 11/76 (14%)

Query: 143 SLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKL 202
           S    ++ HLG       ++ +C  C  +            +  +   C  C K   ++ 
Sbjct: 5   SSGKRQKIHLG------DRSQKCSKCGIIFI-----RRSTLSRRKTPMCEKCRKDSCQEA 53

Query: 203 HLKVHTRTHTGEKPYA 218
            L       +G+K   
Sbjct: 54  ALNKDEGNESGKKTSG 69

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.9 bits (90), Expect = 2e-04
 Identities = 10/52 (19%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 320 CDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPY 371
           C  CG    +     R     +   C +C K   ++  L       +G+K  
Sbjct: 21  CSKCGIIFIRRSTLSRR----KTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 47.2 bits (112), Expect = 1e-07
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKP 370
                     P+ C++CD+ F ++N+L  H R H  +  
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 41.8 bits (98), Expect = 7e-06
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKP 216
                A E  F C+ C++ F ++ +L  H RTH  +  
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           +      GE P++C  C R F Q N + +H RT
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERT 34

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.3 bits (89), Expect = 1e-04
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKHLK 237
              +  GE P+ C  CD+ F Q +  ++H +
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNYLVQHER 33

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 48.6 bits (115), Expect = 2e-07
 Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 4/97 (4%)

Query: 203 HLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSS-HNFDFESVKNKTTPLTRYLNKH 261
             K++    TG   + C  C   +  + +   H+  + H  D     +   P      + 
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 262 LHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEH 298
                 E  +  ++   + KC  CG+   S   L  H
Sbjct: 66  RSLLEMEGKEDAQK---VLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.8 bits (100), Expect = 2e-05
 Identities = 6/38 (15%), Positives = 12/38 (31%)

Query: 357 HLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVH 394
               +  I TG   ++C  C   +    ++  H     
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETG 43

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.8 bits (100), Expect = 2e-05
 Identities = 9/79 (11%), Positives = 17/79 (21%), Gaps = 1/79 (1%)

Query: 324 GEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQS 383
           G        +  +      + C  C   +     LT H    TG              + 
Sbjct: 1   GSSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE-TGHYRDDNHETDNNNPKR 59

Query: 384 NDMKKHRRTVHKAQIHAVE 402
               + R  +        +
Sbjct: 60  WSKPRKRSLLEMEGKEDAQ 78

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.9 bits (95), Expect = 7e-05
 Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 9/88 (10%)

Query: 320 CDVCGE---YKKQLLQHKRL--HFPLRPYACTQC---DKTFKKKNHLTTHYRIHTGEKPY 371
           C  C        +L  H     H+    +          +  +K  L         +K  
Sbjct: 22  CKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL 81

Query: 372 QCDICGRGFAQSNDMKKH-RRTVHKAQI 398
           +C  CG  F    D+  H  +T H  ++
Sbjct: 82  KCMYCGHSFESLQDLSVHMIKTKHYQKV 109

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 38.6 bits (89), Expect = 5e-04
 Identities = 19/112 (16%), Positives = 24/112 (21%), Gaps = 27/112 (24%)

Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERK 188
           + C  C   Y T   L VH               D     D                   
Sbjct: 20  FRCKDCSAAYDTLVELTVHMNET-------GHYRDDNHETDN------------------ 54

Query: 189 FPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSH 240
                   S  RK  L         +K   C  C   F  + D   H+  + 
Sbjct: 55  --NNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 47.6 bits (112), Expect = 5e-07
 Identities = 13/69 (18%), Positives = 20/69 (28%), Gaps = 2/69 (2%)

Query: 326 YKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSND 385
            +   L        +  + C  C   F     L  H R    E    C +C + F  ++ 
Sbjct: 58  DESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDS 115

Query: 386 MKKHRRTVH 394
              H    H
Sbjct: 116 ALDHVCKKH 124

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 44.2 bits (103), Expect = 8e-06
 Identities = 16/63 (25%), Positives = 21/63 (33%), Gaps = 2/63 (3%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKS 238
                    +F C  C   F   + LK H R    E    C +C K F      + H+  
Sbjct: 65  RLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCK 122

Query: 239 SHN 241
            HN
Sbjct: 123 KHN 125

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 46.8 bits (110), Expect = 5e-07
 Identities = 15/77 (19%), Positives = 25/77 (32%), Gaps = 1/77 (1%)

Query: 165 CELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDK 224
           C LC+  +++L    +          C +C   F      + H  +    K   C  C +
Sbjct: 19  CRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEH-ESKCEYKKLTCLECMR 77

Query: 225 RFAQISDRIKHLKSSHN 241
            F       +H    HN
Sbjct: 78  TFKSSFSIWRHQVEVHN 94

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 42.2 bits (98), Expect = 2e-05
 Identities = 18/86 (20%), Positives = 25/86 (29%), Gaps = 3/86 (3%)

Query: 318 GVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICG 377
            +C+       +   H+RL        C  C   F        H       K   C  C 
Sbjct: 20  RLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEH-ESKCEYKKLTCLECM 76

Query: 378 RGFAQSNDMKKHRRTVHKAQIHAVED 403
           R F  S  + +H+  VH     A   
Sbjct: 77  RTFKSSFSIWRHQVEVHNQNNMAPTS 102

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.9 bits (92), Expect = 1e-04
 Identities = 14/81 (17%), Positives = 22/81 (27%), Gaps = 9/81 (11%)

Query: 128 TYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLA-AHHNEVHAHE 186
            Y C  C+    +      H R               C  C     +      +E     
Sbjct: 16  VYQCRLCNAKLSSLLEQGSHERLC--------RNAAVCPYCSLRFFSPELKQEHESKCEY 67

Query: 187 RKFPCTFCEKSFKRKLHLKVH 207
           +K  C  C ++FK    +  H
Sbjct: 68  KKLTCLECMRTFKSSFSIWRH 88

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 43.5 bits (103), Expect = 1e-06
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEK 215
           R F C  C ++F R+ HLK H R+HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEK 369
           R + C  C + F ++ HL  HYR HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 41.4 bits (98), Expect = 8e-06
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 341 RPYACT--QCDKTFKKKNHLTTHYRIHTGEK 369
           RP+ CT   C K F + + L  H R HTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 187 RKFPCTF--CEKSFKRKLHLKVHTRTHTGEK 215
           R F CT+  C K F R   L+ H RTHTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 46.0 bits (108), Expect = 2e-05
 Identities = 8/59 (13%), Positives = 13/59 (22%)

Query: 339 PLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ 397
           P+             K           +    YQC +C        D+  H  +     
Sbjct: 149 PMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHG 207

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 41.0 bits (95), Expect = 6e-04
 Identities = 14/105 (13%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 49  SQQSESTLKTKTRTSADDLETLEISNTPTSAANVENKTLPLTYPCAKTKTRTSADDLETL 108
             +++   + + + +      +  S+T  + AN  +++  +       +   S    E  
Sbjct: 99  KDEADEATQKQAKDTDKSKAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEAT 158

Query: 109 EISNTPTSAANVENKTLP--LTYPCDQCDRTYQTKKSLYVHRRAH 151
               +   A      T      Y C  C     +   L  H  +H
Sbjct: 159 SAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 39.6 bits (93), Expect = 4e-05
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)

Query: 186 ERKFPCTF--CEKSFKRKLHLKVHTRTHTGEK 215
           +++  C    C K + +  HL+ H R HTGE+
Sbjct: 6   KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 38.9 bits (91), Expect = 6e-05
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 341 RPYACT--QCDKTFKKKNHLTTHYRIHTGEK 369
           + + C    C K + K +HL  H R HTGE+
Sbjct: 7   KQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5 Length = 121

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 213 GEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNK 250
           G +   C  CD+ FA   +   H K  H F+ +S+ +K
Sbjct: 12  GRQHTPCLFCDRLFASAEETFSHCKLEHQFNIDSMVHK 49

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus} Length = 28

 Score = 35.9 bits (82), Expect = 7e-04
 Identities = 15/28 (53%), Positives = 21/28 (75%)

Query: 340 LRPYACTQCDKTFKKKNHLTTHYRIHTG 367
           +RPY+C+ C K F  K+ + THYR+HTG
Sbjct: 1   MRPYSCSVCGKRFSLKHQMETHYRVHTG 28

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 36

 Score = 36.0 bits (82), Expect = 8e-04
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 184 AHERKFPCTFCEKSFKRKLHLKVHTRTHTGEK 215
           +  + F C +C K FK K  L+ H R HT EK
Sbjct: 5   SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	405
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.97
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.94
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.9
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.85
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.85
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.84
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.83
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.83
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.78
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.74
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.73
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.72
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.7
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.69
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.68
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.68
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.67
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.66
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.65
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.65
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.65
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.63
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.63
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.63
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.63
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.63
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.62
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.61
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.6
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.58
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.58
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.58
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.57
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.57
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.57
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.56
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.55
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.54
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.53
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.53
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.53
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.52
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.52
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.52
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.51
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.49
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.49
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.48
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.45
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.45
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.44
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.43
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.42
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.4
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.38
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.37
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.36
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.36
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.34
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.29
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.29
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.29
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.27
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.27
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.26
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.25
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.25
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.25
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.24
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.24
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.23
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.23
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.22
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.21
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.21
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.2
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.19
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.18
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.18
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.17
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.16
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.16
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.15
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.14
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.14
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.14
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.13
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.09
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.09
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.03
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.03
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.03
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.03
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.03
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.02
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.02
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.01
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.01
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.0
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.0
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.98
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.97
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.96
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.96
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.95
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.95
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.93
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.91
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.9
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.87
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.87
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.85
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.85
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.81
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.77
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.73
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.69
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.68
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.67
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.62
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.62
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.59
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.56
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.53
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.53
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.5
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.48
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.47
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.47
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.39
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.36
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.29
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.28
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.26
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.26
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.25
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.23
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.23
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.2
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.2
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.18
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.16
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.16
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.14
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.14
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.13
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.13
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.13
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.1
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.1
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.1
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.1
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.08
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.35
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.06
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.06
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.06
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.06
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.33
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.05
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.05
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.04
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.03
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.02
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.29
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.28
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.02
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.02
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.01
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.96
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.89
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.88
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.11
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.07
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.65
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.62
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.49
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.26
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.44
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.4
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.19
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.97
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.94
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.88
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.12
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.95
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.3
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.06
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	91.06
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	89.15
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	87.75
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	86.78
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	86.14
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	85.36
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	83.94
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	81.07
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	80.11
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	80.1

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=6.6e-35  Score=245.86  Aligned_cols=143  Identities=38%  Similarity=0.775  Sum_probs=101.4

Q ss_pred             CCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcccC
Q psy359          187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAH  266 (405)
Q Consensus       187 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~~~  266 (405)
                      ++|.|..|++.|.+...|..|+..|+++++|.|..|++.|.+...|..|++.++                          
T Consensus        48 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--------------------------  101 (190)
T 2i13_A           48 KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHT--------------------------  101 (190)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH--------------------------
T ss_pred             CCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcC--------------------------
Confidence            445566666666666666666555555555666666666666666666655543                          


Q ss_pred             cchhhhhhhcccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccc
Q psy359          267 PEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACT  346 (405)
Q Consensus       267 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~  346 (405)
                               ++.+|.|++|++.|.+...|..|+                                   ++|+++++|+|+
T Consensus       102 ---------~~~~~~C~~C~~~f~~~~~l~~H~-----------------------------------~~h~~~~~~~C~  137 (190)
T 2i13_A          102 ---------GEKPYACPECGKSFSQLAHLRAHQ-----------------------------------RTHTGEKPYKCP  137 (190)
T ss_dssp             ---------TCCCEECTTTCCEESSHHHHHHHH-----------------------------------HHHHCCCCEECT
T ss_pred             ---------CCCCCcCCCCCCccCCHHHHHHHH-----------------------------------HHhCCCCCeECC
Confidence                     234566666666666655555555                                   456778899999


Q ss_pred             cccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccc
Q psy359          347 QCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIH  399 (405)
Q Consensus       347 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  399 (405)
                      +|++.|.+...|..|++.|+++++|.|++|++.|.+...|..|+++|++++||
T Consensus       138 ~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          138 ECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             TTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             CCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999986

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.97  E-value=2.8e-32  Score=229.75  Aligned_cols=174  Identities=34%  Similarity=0.717  Sum_probs=137.3

Q ss_pred             CCCcCcccccCCCccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhh--cHHHHHHhhccCCCCccCccchhccC
Q psy359          122 NKTLPLTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVT--NLAAHHNEVHAHERKFPCTFCEKSFK  199 (405)
Q Consensus       122 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~--~l~~~~~~~h~~~~~~~C~~C~~~f~  199 (405)
                      ...+..+|.|..|++.|.+...|..|++.|++      ..+|.|..|++.|.  ..+..|+..|.++++|.|..|++.|.
T Consensus        15 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   88 (190)
T 2i13_A           15 LEPGEKPYACPECGKSFSRSDHLAEHQRTHTG------EKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFS   88 (190)
T ss_dssp             ----------------CCSSHHHHHGGGCC---------CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred             hcCCCCCCcCCCCccccCCHHHHHHHHHHcCC------CCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccC
Confidence            34456679999999999999999999999988      78899999999998  33445688899999999999999999


Q ss_pred             ChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcccCcchhhhhhhcccc
Q psy359          200 RKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLI  279 (405)
Q Consensus       200 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~  279 (405)
                      +...|..|++.|+++++|.|..|++.|.+...|..|++.++                                   ++++
T Consensus        89 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------------------------------~~~~  133 (190)
T 2i13_A           89 QRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT-----------------------------------GEKP  133 (190)
T ss_dssp             CHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHH-----------------------------------CCCC
T ss_pred             CHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhC-----------------------------------CCCC
Confidence            99999999999999999999999999999999999999865                                   4668


Q ss_pred             eecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCchhHH
Q psy359          280 FKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLT  359 (405)
Q Consensus       280 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  359 (405)
                      |.|++|++.|.+...|..|++.                                   |+++++|+|++|++.|.+...|.
T Consensus       134 ~~C~~C~~~f~~~~~L~~H~~~-----------------------------------H~~~~~~~C~~C~~~f~~~~~L~  178 (190)
T 2i13_A          134 YKCPECGKSFSREDNLHTHQRT-----------------------------------HTGEKPYKCPECGKSFSRRDALN  178 (190)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH-----------------------------------HHCCCCEECTTTCCEESSHHHHH
T ss_pred             eECCCCCcccCCHHHHHHHHHh-----------------------------------cCCCCCeECCCCCCccCCHHHHH
Confidence            9999999999999998888874                                   45678899999999999999999


Q ss_pred             HHhhhhCCCCcc
Q psy359          360 THYRIHTGEKPY  371 (405)
Q Consensus       360 ~H~~~h~~~~~~  371 (405)
                      .|++.|+|++||
T Consensus       179 ~H~~~H~~~k~~  190 (190)
T 2i13_A          179 VHQRTHTGKKTS  190 (190)
T ss_dssp             HHHTTC------
T ss_pred             HHHHhcCCCCCC
Confidence            999999999886

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=7.4e-30  Score=214.90  Aligned_cols=168  Identities=34%  Similarity=0.643  Sum_probs=139.6

Q ss_pred             Cccccc--CCCccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhhcHHHHHHhhccCCCCccC--ccchhccCCh
Q psy359          126 PLTYPC--DQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPC--TFCEKSFKRK  201 (405)
Q Consensus       126 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~l~~~~~~~h~~~~~~~C--~~C~~~f~~~  201 (405)
                      .++|.|  ..|++.|.+...|..|++.|.+                                +++|.|  ..|++.|.+.
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~--------------------------------~~~~~C~~~~C~~~f~~~   57 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTG--------------------------------EKPFPCKEEGCEKGFTSL   57 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHC--------------------------------CCSSCCSSTTCCCCCSSH
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCC--------------------------------CCCccCCCCCCChhhCCH
Confidence            455788  6788888888888888887765                                356888  7788888888


Q ss_pred             HHHHHHHhhhcCCCCcccc--cchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcccCcchhhhhhhcccc
Q psy359          202 LHLKVHTRTHTGEKPYACY--LCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLI  279 (405)
Q Consensus       202 ~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~  279 (405)
                      ..|..|+++|.++++|.|.  .|++.|.+...|..|++..|..                                 +..+
T Consensus        58 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~---------------------------------~~~~  104 (190)
T 1tf6_A           58 HHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNI---------------------------------KICV  104 (190)
T ss_dssp             HHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSST---------------------------------TTSC
T ss_pred             HHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCC---------------------------------Ccce
Confidence            8888888888888888888  7888888888888888554420                                 3457


Q ss_pred             eec--CCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCcccccc--ccccccCc
Q psy359          280 FKC--DLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQ--CDKTFKKK  355 (405)
Q Consensus       280 ~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~  355 (405)
                      |.|  +.|++.|.+...|..|++                                   +|++++||+|++  |++.|.+.
T Consensus       105 ~~C~~~~C~k~f~~~~~L~~H~~-----------------------------------~H~~~~~~~C~~~~C~k~F~~~  149 (190)
T 1tf6_A          105 YVCHFENCGKAFKKHNQLKVHQF-----------------------------------SHTQQLPYECPHEGCDKRFSLP  149 (190)
T ss_dssp             CEECSSSSCEECSSHHHHHHHHG-----------------------------------GGSSSCSSBCCSSSCCCBCSSH
T ss_pred             eeCCCCCCccccCCHHHHHHHHH-----------------------------------HhCCCCCccCCCCCCCchhcCH
Confidence            888  888888888888777766                                   366778999988  99999999


Q ss_pred             hhHHHHhhhhCCCCcccCCc---cccccCChHHHHHHHHhhccc
Q psy359          356 NHLTTHYRIHTGEKPYQCDI---CGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       356 ~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ..|..|++.|++   |.|..   |++.|.+...|..|+++||++
T Consensus       150 ~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          150 SRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             HHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             HHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            999999999998   99999   999999999999999999975

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.94  E-value=1e-26  Score=195.64  Aligned_cols=151  Identities=27%  Similarity=0.596  Sum_probs=135.9

Q ss_pred             cCCCCccC--ccchhccCChHHHHHHHhhhcCCCCccc--ccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhh
Q psy359          184 AHERKFPC--TFCEKSFKRKLHLKVHTRTHTGEKPYAC--YLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLN  259 (405)
Q Consensus       184 ~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~  259 (405)
                      .+.++|.|  ..|++.|.+...|..|++.|.++++|.|  ..|++.|.+...|..|++.|+                   
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------------   68 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHT-------------------   68 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTT-------------------
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHcc-------------------
Confidence            45678999  6899999999999999999999999999  889999999999999999865                   


Q ss_pred             hhhcccCcchhhhhhhcccceecC--CCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhc
Q psy359          260 KHLHDAHPEAIKTERERKLIFKCD--LCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLH  337 (405)
Q Consensus       260 ~h~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h  337 (405)
                                      ++++|.|.  .|++.|.+...|..|++..|.                                 
T Consensus        69 ----------------~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~---------------------------------   99 (190)
T 1tf6_A           69 ----------------GEKNFTCDSDGCDLRFTTKANMKKHFNRFHN---------------------------------   99 (190)
T ss_dssp             ----------------TCCCEECCSSSCCCEESCHHHHHHHHHTTSS---------------------------------
T ss_pred             ----------------CCCceeCCCCCCCCccCCHHHHHHHHHHhcC---------------------------------
Confidence                            35689999  899999999999999964542                                 


Q ss_pred             CCCCcccc--ccccccccCchhHHHHhhhhCCCCcccCCc--cccccCChHHHHHHHHhhcccccccccc---CC
Q psy359          338 FPLRPYAC--TQCDKTFKKKNHLTTHYRIHTGEKPYQCDI--CGRGFAQSNDMKKHRRTVHKAQIHAVED---KG  405 (405)
Q Consensus       338 ~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~---~~  405 (405)
                      .++++|.|  ..|++.|.+...|..|++.|+++++|.|++  |++.|.+...|..|+++|++   |.|+.   ||
T Consensus       100 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~  171 (190)
T 1tf6_A          100 IKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCS  171 (190)
T ss_dssp             TTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCC
T ss_pred             CCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCC
Confidence            24577999  889999999999999999999999999988  99999999999999999988   77887   75

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=1.7e-25  Score=181.78  Aligned_cols=139  Identities=27%  Similarity=0.556  Sum_probs=122.2

Q ss_pred             CCccCccchhccCChHHHHHHHh---hhcCCCCcccccc-----hHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHh
Q psy359          187 RKFPCTFCEKSFKRKLHLKVHTR---THTGEKPYACYLC-----DKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYL  258 (405)
Q Consensus       187 ~~~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~C-----~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l  258 (405)
                      .+|.|..|++.|.+...|..|++   .|.+.++|.|.+|     ++.|.+...|..|++.++                  
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~------------------   63 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT------------------   63 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHH------------------
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcC------------------
Confidence            46899999999999999999988   5778889988753     488888888888888765                  


Q ss_pred             hhhhcccCcchhhhhhhcccceecCC--CcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhh
Q psy359          259 NKHLHDAHPEAIKTERERKLIFKCDL--CGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRL  336 (405)
Q Consensus       259 ~~h~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~  336 (405)
                                       ++++|.|.+  |++.|.+...|..|++.                                   
T Consensus        64 -----------------~~~~~~C~~~~C~~~f~~~~~l~~H~~~-----------------------------------   91 (155)
T 2gli_A           64 -----------------GEKPHKCTFEGCRKSYSRLENLKTHLRS-----------------------------------   91 (155)
T ss_dssp             -----------------CCCCCCCCSTTCCCCCSSHHHHHHHHHH-----------------------------------
T ss_pred             -----------------CCCCccCCCCCCCCcccCHHHHHHHHHH-----------------------------------
Confidence                             356799985  99999999888887773                                   


Q ss_pred             cCCCCcccccc--ccccccCchhHHHHh-hhhCCCCcccCCc--cccccCChHHHHHHHHhhcc
Q psy359          337 HFPLRPYACTQ--CDKTFKKKNHLTTHY-RIHTGEKPYQCDI--CGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       337 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~  395 (405)
                      |+++++|.|++  |++.|.+...|..|+ +.|.++++|.|++  |++.|.+...|..|+++|||
T Consensus        92 h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           92 HTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             cCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            56678899998  999999999999999 8999999999999  99999999999999999986

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=5.4e-24  Score=172.80  Aligned_cols=148  Identities=26%  Similarity=0.498  Sum_probs=121.5

Q ss_pred             cccccCCCccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhhcHHHHHHhhccCCCCccCccchhccCChHHHHH
Q psy359          127 LTYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKV  206 (405)
Q Consensus       127 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~l~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~  206 (405)
                      .+|.|..|++.|.+...|..|++.++.-.   ...+|.|.+|                     .|..|++.|.+...|..
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~---~~~~~~C~~c---------------------~C~~c~~~f~~~~~l~~   57 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHG---ERKEFVCHWG---------------------GCSRELRPFKAQYMLVV   57 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSS---CSSCCCCCBT---------------------TCTTTTCCCSSHHHHHH
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCC---CCcceeCCCC---------------------CccchhhhhhhHHHHHH
Confidence            35899999999999999999998532100   0233333321                     24455699999999999


Q ss_pred             HHhhhcCCCCccccc--chHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcccCcchhhhhhhcccceecCC
Q psy359          207 HTRTHTGEKPYACYL--CDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDL  284 (405)
Q Consensus       207 H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~C~~  284 (405)
                      |++.|+++++|.|..  |++.|.+...|..|++.|+                                   ++++|.|++
T Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-----------------------------------~~~~~~C~~  102 (155)
T 2gli_A           58 HMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHT-----------------------------------GEKPYMCEH  102 (155)
T ss_dssp             HTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTT-----------------------------------TCCCEECCS
T ss_pred             HHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcC-----------------------------------CCCCeeCCC
Confidence            999999999999985  9999999999999999865                                   356899998


Q ss_pred             --CcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCcccccc--ccccccCchhHHH
Q psy359          285 --CGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQ--CDKTFKKKNHLTT  360 (405)
Q Consensus       285 --C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~  360 (405)
                        |++.|.+...|..|++..                                  |+++++|.|++  |++.|.+...|..
T Consensus       103 ~~C~~~f~~~~~L~~H~~~~----------------------------------H~~~~~~~C~~~~C~~~f~~~~~L~~  148 (155)
T 2gli_A          103 EGCSKAFSNASDRAKHQNRT----------------------------------HSNEKPYVCKLPGCTKRYTDPSSLRK  148 (155)
T ss_dssp             TTCCCEESSSSTTHHHHHHT----------------------------------TCSCCCEECCSTTTCCEESSHHHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHh----------------------------------cCCCCCeeCCCCCCccccCCHHHHHH
Confidence              999999999988887433                                  55678899998  9999999999999


Q ss_pred             HhhhhCC
Q psy359          361 HYRIHTG  367 (405)
Q Consensus       361 H~~~h~~  367 (405)
                      |++.|+|
T Consensus       149 H~~~hhg  155 (155)
T 2gli_A          149 HVKTVHG  155 (155)
T ss_dssp             HHHHSCC
T ss_pred             HHHhhcC
Confidence            9999885

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=1.1e-22  Score=158.37  Aligned_cols=118  Identities=29%  Similarity=0.555  Sum_probs=89.4

Q ss_pred             CCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcccCcchhhhhhhcccceecCCCcccCCCh
Q psy359          213 GEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSK  292 (405)
Q Consensus       213 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~  292 (405)
                      ++++|+|..|++.|.+...|..|++.++                                   ++++|.|++|++.|.+.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------------------------------~~~~~~C~~C~~~f~~~   48 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHT-----------------------------------GEKPFECPKCGKCYFRK   48 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHS-----------------------------------SCCSCBCTTTCCBCSSH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCC-----------------------------------CCCCeECCCCCchhcCH
Confidence            4456666666666666666666666544                                   23457777777777777


Q ss_pred             HHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCccc
Q psy359          293 HILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQ  372 (405)
Q Consensus       293 ~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  372 (405)
                      ..|..|++.+|.                                +.++++|.|++|++.|.+...|..|++.|+++++|.
T Consensus        49 ~~l~~H~~~~~~--------------------------------~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   96 (124)
T 2dlq_A           49 ENLLEHEARNCM--------------------------------NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYK   96 (124)
T ss_dssp             HHHHHHHHHCCC--------------------------------CSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEE
T ss_pred             HHHHHHHhhhhc--------------------------------CCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcc
Confidence            777777664321                                345678999999999999999999999999999999


Q ss_pred             CCccccccCChHHHHHHHHhhcccc
Q psy359          373 CDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       373 C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      |++|++.|.+...|..|++..|++.
T Consensus        97 C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           97 CSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             CSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             CCCccchhCCHHHHHHHHHHHCCCC
Confidence            9999999999999999998777653

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=1.3e-22  Score=164.57  Aligned_cols=126  Identities=32%  Similarity=0.539  Sum_probs=111.7

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccc---hHHHHhhhhhcCCCCcccccc--ccc
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEY---KKQLLQHKRLHFPLRPYACTQ--CDK  350 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~---~~~l~~H~~~h~~~~~~~C~~--C~~  350 (405)
                      ....|.|..|++.|.+...|..|++..|....+...... ..|.|+.|++.   ...|..|+++|+++++|.|.+  |++
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  100 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGK  100 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCC-CBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCC
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccc-cccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCC
Confidence            456899999999999999999999977876532211111 12789999986   889999999999999999998  999


Q ss_pred             cccCchhHHHHhhhhCCCCcccCCc--cccccCChHHHHHHHHhhccccccccc
Q psy359          351 TFKKKNHLTTHYRIHTGEKPYQCDI--CGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       351 ~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      .|.+...|..|++.|+++++|.|.+  |++.|.+...|..|+++|++++||.|.
T Consensus       101 ~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          101 IFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             EESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             ccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            9999999999999999999999998  999999999999999999999999985

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.86  E-value=3.7e-22  Score=155.47  Aligned_cols=71  Identities=42%  Similarity=0.769  Sum_probs=55.8

Q ss_pred             HHhhhhhcCCCCcccccc--ccccccCchhHHHHhhhhCCCCcccCCc--cccccCChHHHHHHHHhhccccccc
Q psy359          330 LLQHKRLHFPLRPYACTQ--CDKTFKKKNHLTTHYRIHTGEKPYQCDI--CGRGFAQSNDMKKHRRTVHKAQIHA  400 (405)
Q Consensus       330 l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~  400 (405)
                      |..|+++|+++++|.|.+  |++.|.+...|..|++.|+++++|.|++  |++.|.+...|..|+++|+++++++
T Consensus        50 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           50 LKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            333444466778899986  9999999999999999999999999964  9999999999999999999988764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=2.7e-22  Score=156.97  Aligned_cols=95  Identities=27%  Similarity=0.524  Sum_probs=79.1

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCc
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKK  355 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  355 (405)
                      ++++|.|++|++.|.+.+.|..|++.                                   |++++||+|.+|++.|.+.
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~~-----------------------------------H~~~k~~~C~~C~k~F~~~   63 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFNI-----------------------------------HSWEKKYPCRYCEKVFPLA   63 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHHH-----------------------------------HHCCSCEECSSSSCEESSH
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHHH-----------------------------------cCCCCCeeCCccCeecccc
Confidence            78899999999999999999988873                                   4566778888888888888


Q ss_pred             hhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccc------ccccccCC
Q psy359          356 NHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ------IHAVEDKG  405 (405)
Q Consensus       356 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~------~~~~~~~~  405 (405)
                      ..|..|++.|.++++|.|++|++.|.+...|..|+++||+++      +|.|..||
T Consensus        64 ~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~  119 (133)
T 2lt7_A           64 EYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCR  119 (133)
T ss_dssp             HHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCC
T ss_pred             cchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCC
Confidence            888888888888888888888888888888888888888765      36666664

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=1.7e-21  Score=151.61  Aligned_cols=118  Identities=31%  Similarity=0.636  Sum_probs=103.7

Q ss_pred             cCCCCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhc
Q psy359          184 AHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLH  263 (405)
Q Consensus       184 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~  263 (405)
                      .+.++|.|..|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.++...                    
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~--------------------   62 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR--------------------   62 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCS--------------------
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCC--------------------
Confidence            356789999999999999999999999999999999999999999999999998753211                    


Q ss_pred             ccCcchhhhhhhcccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCcc
Q psy359          264 DAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPY  343 (405)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~  343 (405)
                                  ...+|.|++|++.|.+...|..|++.                                   |++++||
T Consensus        63 ------------~~~~~~C~~C~~~f~~~~~l~~H~~~-----------------------------------h~~~~~~   95 (124)
T 2dlq_A           63 ------------SEQVFTCSVCQETFRRRMELRLHMVS-----------------------------------HTGEMPY   95 (124)
T ss_dssp             ------------CCCCEECSSSCCEESSHHHHHHHHHH-----------------------------------HSSSCSE
T ss_pred             ------------CCCCeECCCCCCccCCHHHHHHHHHH-----------------------------------cCCCCCc
Confidence                        46689999999999999998888774                                   5567889


Q ss_pred             ccccccccccCchhHHHHhh-hhCCC
Q psy359          344 ACTQCDKTFKKKNHLTTHYR-IHTGE  368 (405)
Q Consensus       344 ~C~~C~~~f~~~~~l~~H~~-~h~~~  368 (405)
                      +|++|++.|.+...|..|++ .|.++
T Consensus        96 ~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           96 KCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             cCCCccchhCCHHHHHHHHHHHCCCC
Confidence            99999999999999999997 46554

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.85  E-value=8.5e-22  Score=152.21  Aligned_cols=57  Identities=39%  Similarity=0.940  Sum_probs=49.2

Q ss_pred             cCCCCccccccccccccCchhHHHHhhhhCCCCcccC--CccccccCChHHHHHHHHhh
Q psy359          337 HFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC--DICGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       337 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~  393 (405)
                      |+++++|.|.+|++.|.+...|..|++.|+++++|.|  +.|++.|.+...|..|+++|
T Consensus        61 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           61 HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             cCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            4456778999999999999999999999998899999  78999999999999998875

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.84  E-value=9e-22  Score=153.97  Aligned_cols=115  Identities=22%  Similarity=0.398  Sum_probs=98.7

Q ss_pred             HHHhhccCCCCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHH
Q psy359          178 HHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRY  257 (405)
Q Consensus       178 ~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~  257 (405)
                      ++..+|.|+++|.|.+|++.|.....|..|+++|.+++||+|..|++.|.+...|..|++.|.                 
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-----------------   74 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHT-----------------   74 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHH-----------------
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccC-----------------
Confidence            346678899999999999999999999999999999999999999999999999999998864                 


Q ss_pred             hhhhhcccCcchhhhhhhcccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhc
Q psy359          258 LNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLH  337 (405)
Q Consensus       258 l~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h  337 (405)
                                        ++++|.|++|++.|.+.+.|..|++.+|...+                             .
T Consensus        75 ------------------~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p-----------------------------~  107 (133)
T 2lt7_A           75 ------------------GERRYQCLACGKSFINYQFMSSHIKSVHSQDP-----------------------------S  107 (133)
T ss_dssp             ------------------TCCCEEESSSCCEESSHHHHHHHHHHHTCCCT-----------------------------T
T ss_pred             ------------------CCccccCCCCCCCcCCHHHHHHHhHHhcCCCC-----------------------------C
Confidence                              46789999999999999999999997775431                             1


Q ss_pred             CCCCccccccccccccCch
Q psy359          338 FPLRPYACTQCDKTFKKKN  356 (405)
Q Consensus       338 ~~~~~~~C~~C~~~f~~~~  356 (405)
                      ...++|+|.+|++.|....
T Consensus       108 ~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A          108 GDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             SSSCCEEECCCCSSCCCCC
T ss_pred             CCCCCeecCCCCchhhhcc
Confidence            2346688888888776543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.83  E-value=4.9e-21  Score=155.26  Aligned_cols=120  Identities=24%  Similarity=0.491  Sum_probs=102.7

Q ss_pred             CCCCccCccchhccCChHHHHHHHhh-hcCCCC--------cccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcch
Q psy359          185 HERKFPCTFCEKSFKRKLHLKVHTRT-HTGEKP--------YACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLT  255 (405)
Q Consensus       185 ~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~  255 (405)
                      ...+|.|..|++.|.+...|..|++. |.+..+        |.|..|++.|.+...|..|++.|+               
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~---------------   86 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT---------------   86 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHH---------------
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcC---------------
Confidence            45679999999999999999999887 655544        789999999999999999988765               


Q ss_pred             HHhhhhhcccCcchhhhhhhcccceecCC--CcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhh
Q psy359          256 RYLNKHLHDAHPEAIKTERERKLIFKCDL--CGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQH  333 (405)
Q Consensus       256 ~~l~~h~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H  333 (405)
                                          ++++|.|.+  |++.|.+...|..|++.                                
T Consensus        87 --------------------~~~~~~C~~~~C~~~f~~~~~L~~H~~~--------------------------------  114 (155)
T 2rpc_A           87 --------------------GEKPFPCPFPGCGKIFARSENLKIHKRT--------------------------------  114 (155)
T ss_dssp             --------------------CCCSEECSCTTTCCEESCHHHHHHHHTT--------------------------------
T ss_pred             --------------------CCCcccCCcCCCCCccCCHHHHHHHHHh--------------------------------
Confidence                                356789988  99999888888877763                                


Q ss_pred             hhhcCCCCcccccc--ccccccCchhHHHHhhhhCCCCcccCC
Q psy359          334 KRLHFPLRPYACTQ--CDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       334 ~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                         |+++++|.|.+  |++.|.+...|..|++.|+++++|.|+
T Consensus       115 ---h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          115 ---HTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             ---TCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             ---hCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence               56778899997  999999999999999999999999996

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.83  E-value=5.5e-21  Score=147.62  Aligned_cols=112  Identities=33%  Similarity=0.767  Sum_probs=100.9

Q ss_pred             cCCCCccCcc--chhccCChHHHHHHHhhhcCCCCcccc--cchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhh
Q psy359          184 AHERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYACY--LCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLN  259 (405)
Q Consensus       184 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~  259 (405)
                      .++++|.|.+  |++.|.+...|..|++.|.++++|.|.  .|++.|.+...|..|++.++                   
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------------   62 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHT-------------------   62 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH-------------------
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcC-------------------
Confidence            4568899997  999999999999999999999999999  79999999999999999865                   


Q ss_pred             hhhcccCcchhhhhhhcccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCC
Q psy359          260 KHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFP  339 (405)
Q Consensus       260 ~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~  339 (405)
                                      ++++|.|++|++.|.+...|..|++.                                   |++
T Consensus        63 ----------------~~~~~~C~~C~~~f~~~~~l~~H~~~-----------------------------------h~~   91 (119)
T 2jp9_A           63 ----------------GVKPFQCKTCQRKFSRSDHLKTHTRT-----------------------------------HTG   91 (119)
T ss_dssp             ----------------CCCCEECTTTCCEESCHHHHHHHHHH-----------------------------------HHT
T ss_pred             ----------------CCCCccCCccCchhCCHHHHHHHHHH-----------------------------------hcC
Confidence                            35689999999999999998888874                                   456


Q ss_pred             CCcccc--ccccccccCchhHHHHhhhh
Q psy359          340 LRPYAC--TQCDKTFKKKNHLTTHYRIH  365 (405)
Q Consensus       340 ~~~~~C--~~C~~~f~~~~~l~~H~~~h  365 (405)
                      +++|+|  +.|++.|.+...|..|+++|
T Consensus        92 ~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           92 EKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            688999  89999999999999999876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.83  E-value=5.6e-21  Score=148.71  Aligned_cols=116  Identities=32%  Similarity=0.611  Sum_probs=97.5

Q ss_pred             CCCccCc--cchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhc
Q psy359          186 ERKFPCT--FCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLH  263 (405)
Q Consensus       186 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~  263 (405)
                      +++|.|.  .|++.|.+...|..|++.| +.++|.|..|++.|.+...|..|++.|+                       
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------------------   58 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHT-----------------------   58 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTS-----------------------
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcC-----------------------
Confidence            4679999  8999999999999999998 8889999999999999999999998865                       


Q ss_pred             ccCcchhhhhhhcccceecCC--CcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCC
Q psy359          264 DAHPEAIKTERERKLIFKCDL--CGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLR  341 (405)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~  341 (405)
                                  ++++|.|.+  |++.|.+...|..|++.                                   |++++
T Consensus        59 ------------~~~~~~C~~~~C~~~f~~~~~l~~H~~~-----------------------------------h~~~~   91 (124)
T 1ubd_C           59 ------------GEKPFQCTFEGCGKRFSLDFNLRTHVRI-----------------------------------HTGDR   91 (124)
T ss_dssp             ------------CCCCEECCSTTCCCEESCHHHHHHHHHH-----------------------------------HHCCC
T ss_pred             ------------CCCCeeCCCCCCcCccCCHHHHHHHHHH-----------------------------------hCCCC
Confidence                        356899986  99999999998888874                                   45668


Q ss_pred             cccccc--ccccccCchhHHHHhhhhCCCCccc
Q psy359          342 PYACTQ--CDKTFKKKNHLTTHYRIHTGEKPYQ  372 (405)
Q Consensus       342 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~  372 (405)
                      +|.|++  |++.|.+...|..|++.|+++++++
T Consensus        92 ~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           92 PYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             ceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            899964  9999999999999999999988764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.78  E-value=6.2e-19  Score=132.99  Aligned_cols=91  Identities=35%  Similarity=0.736  Sum_probs=84.0

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCc
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKK  355 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  355 (405)
                      .+++|.|.+|++.|.+...|..|++.                                   |+++++|+|.+|++.|...
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~-----------------------------------h~~~~~~~C~~C~~~f~~~   58 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERT-----------------------------------HTDERPYTCDICHKAFRRQ   58 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHH-----------------------------------HCCSCCCBCSSSCCBCSCH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHH-----------------------------------cCCCCCcCCCCccchhCCH
Confidence            56789999999999999988888774                                   5567889999999999999


Q ss_pred             hhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccc
Q psy359          356 NHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAV  401 (405)
Q Consensus       356 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  401 (405)
                      ..|..|++.|+++++|.|.+|++.|.+...|..|+++|++++||.+
T Consensus        59 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           59 DHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             HHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            9999999999999999999999999999999999999999999875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.2e-18  Score=128.76  Aligned_cols=88  Identities=32%  Similarity=0.669  Sum_probs=81.1

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCc
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKK  355 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  355 (405)
                      ++++|.|.+|++.|.+...|..|++.                                   |+++++|.|.+|++.|...
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~-----------------------------------h~~~~~~~C~~C~~~f~~~   49 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRC-----------------------------------HTGVKPYKCKTCDYAAADS   49 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGG-----------------------------------CCCCCSEECSSSCCEESSH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHh-----------------------------------cCCCCCEeCCCCCCccCCH
Confidence            56789999999999999988887773                                   5567889999999999999


Q ss_pred             hhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccc
Q psy359          356 NHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQI  398 (405)
Q Consensus       356 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  398 (405)
                      ..|..|++.|+++++|.|.+|++.|.+...|..|+++|+++++
T Consensus        50 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           50 SSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             HHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             HHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999999999999999999999874

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.74  E-value=2e-18  Score=123.54  Aligned_cols=82  Identities=38%  Similarity=0.848  Sum_probs=74.6

Q ss_pred             ceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCchhH
Q psy359          279 IFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHL  358 (405)
Q Consensus       279 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  358 (405)
                      +|.|.+|++.|.+...|..|++.                                   |.++++|.|+.|++.|.+...|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~-----------------------------------h~~~~~~~C~~C~~~f~~~~~l   45 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLI-----------------------------------HSDTRPYPCQYCGKRFHQKSDM   45 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH-----------------------------------HHTCCCEECSSSCCEESSHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHH-----------------------------------cCCCCCeeCCcCChhhCCHHHH
Confidence            48899999999999888888874                                   4456789999999999999999


Q ss_pred             HHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcc
Q psy359          359 TTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       359 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      ..|++.|+++++|.|++|++.|.+...|..|+++|+|
T Consensus        46 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           46 KKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             HHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            9999999999999999999999999999999999875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.73  E-value=2.3e-18  Score=125.69  Aligned_cols=86  Identities=40%  Similarity=0.859  Sum_probs=76.7

Q ss_pred             ccceecC--CCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccC
Q psy359          277 KLIFKCD--LCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKK  354 (405)
Q Consensus       277 ~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  354 (405)
                      +++|.|.  .|++.|.+...|..|++.                                   |+++++|.|.+|++.|.+
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~-----------------------------------h~~~~~~~C~~C~~~f~~   46 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRI-----------------------------------HTGQKPFQCRICMRNFSR   46 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHH-----------------------------------HHCCCCEECTTTCCEESC
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHH-----------------------------------hCCCCCccCCCCCcccCC
Confidence            4679998  599999999988888874                                   445678999999999999


Q ss_pred             chhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccc
Q psy359          355 KNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       355 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      ...|..|++.|+++++|.|++|++.|.+...|..|+++|++++
T Consensus        47 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           47 SDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             HHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            9999999999999999999999999999999999999999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.3e-17  Score=122.91  Aligned_cols=87  Identities=33%  Similarity=0.765  Sum_probs=77.9

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCc
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKK  355 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  355 (405)
                      ++++|.|.+|++.|.+...|..|++.                                   |+++++|.|.+|++.|.+.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~-----------------------------------h~~~~~~~C~~C~~~f~~~   48 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLS-----------------------------------HSGEKPYSCPVCGLRFKRK   48 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHH-----------------------------------SCSSCSEECSSSCCEESCH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHh-----------------------------------cCCCCCCcCCCCCCccCCH
Confidence            56789999999999999988888773                                   4567889999999999999


Q ss_pred             hhHHHHhhhhCCC--CcccCCccccccCChHHHHHHHHhhcccc
Q psy359          356 NHLTTHYRIHTGE--KPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       356 ~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      ..|..|++.|+++  ++|.|.+|++.|.+...|..|++..|...
T Consensus        49 ~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           49 DRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             HHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            9999999999987  89999999999999999999998666543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.70  E-value=5.6e-18  Score=111.78  Aligned_cols=58  Identities=29%  Similarity=0.725  Sum_probs=55.4

Q ss_pred             CCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccc
Q psy359          340 LRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       340 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      |+||+|.+|++.|...+.|..|+++|.|++||.|.+|++.|.+.+.|..|+++|.++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7899999999999999999999999999999999999999999999999999988764

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=2.6e-17  Score=124.93  Aligned_cols=85  Identities=38%  Similarity=0.854  Sum_probs=78.6

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCc
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKK  355 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  355 (405)
                      ++++|.| .|++.|.+...|..|++.                                   |+++++|.|.+|++.|...
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~-----------------------------------h~~~~~~~C~~C~~~f~~~   50 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSM-----------------------------------HLGLRPYGCGVCGKKFKMK   50 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHH-----------------------------------HSCCCSEECTTTSCEESSS
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHH-----------------------------------cCCCcCccCCCCCcccCCH
Confidence            5778999 899999999988888874                                   4566889999999999999


Q ss_pred             hhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          356 NHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       356 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ..|..|++.|+++++|.|.+|++.|.+...|..|+++||+.
T Consensus        51 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           51 HHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence            99999999999999999999999999999999999999876

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=3.3e-17  Score=123.60  Aligned_cols=90  Identities=22%  Similarity=0.354  Sum_probs=80.8

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCc
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKK  355 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  355 (405)
                      ++++|.|.+|++.|.+...|..|++. |                                    .++|+|.+|++.|...
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~-H------------------------------------~~~~~C~~C~~~f~~~   55 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERL-C------------------------------------RNAAVCPYCSLRFFSP   55 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHH-H------------------------------------HHSBCCTTTCCCBSSH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHH-C------------------------------------CCCccCCCCCCccCCH
Confidence            57789999999999999999999884 2                                    1469999999999999


Q ss_pred             hhHHHHhhhhCCCCcccCCccccccCChHHHHHHHH-hhcccccccccc
Q psy359          356 NHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRR-TVHKAQIHAVED  403 (405)
Q Consensus       356 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~~~~~~~  403 (405)
                      ..|..|++ |.++++|.|.+|++.|.+...|..|++ .|.+++||.+..
T Consensus        56 ~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~  103 (107)
T 1wjp_A           56 ELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTSG  103 (107)
T ss_dssp             HHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCCC
T ss_pred             HHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            99999996 999999999999999999999999997 777778888754

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=1.3e-17  Score=127.67  Aligned_cols=97  Identities=19%  Similarity=0.264  Sum_probs=82.9

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCc-cccccccccc--
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRP-YACTQCDKTF--  352 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~-~~C~~C~~~f--  352 (405)
                      ++++|.|.+|++.|.+...|..|++. +.                                |.++++ +.|.+|++.|  
T Consensus        16 ~~~~~~C~~C~k~f~~~~~L~~H~~~-~~--------------------------------h~~~~~~~~C~~C~~~f~f   62 (115)
T 2dmi_A           16 GASKFRCKDCSAAYDTLVELTVHMNE-TG--------------------------------HYRDDNHETDNNNPKRWSK   62 (115)
T ss_dssp             CCCSEEBSSSSCEESSHHHHHHHHHH-TC--------------------------------CCBCSCCCCCCCCCSCCSS
T ss_pred             CCCCEECCccCchhcCHHHHHHHHHH-hC--------------------------------ccccCCCccCCCCCccccc
Confidence            56789999999999999999999984 21                                223344 4599999999  


Q ss_pred             cCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccCC
Q psy359          353 KKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDKG  405 (405)
Q Consensus       353 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~  405 (405)
                      .....|..|++.|.++++|.|.+|++.|.+...|..|++.||.......+..|
T Consensus        63 ~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~~sg  115 (115)
T 2dmi_A           63 PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSSG  115 (115)
T ss_dssp             CCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCSCCCCCC
T ss_pred             ccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcccCCCCCCC
Confidence            99999999999999999999999999999999999999999988766555443

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.67  E-value=1.1e-16  Score=120.60  Aligned_cols=36  Identities=22%  Similarity=0.508  Sum_probs=22.6

Q ss_pred             CCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          338 FPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       338 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      +++++|+|.+|++.|.+...|..|++.|+++++|.+
T Consensus        69 ~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           69 SKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             CCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            344556666666666666666666666666666543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=4.9e-17  Score=117.40  Aligned_cols=76  Identities=30%  Similarity=0.601  Sum_probs=72.1

Q ss_pred             HHhhhhhcCCCCccccccccccccCchhHHHHhhhhCCC----CcccCCccccccCChHHHHHHHHhhccccccccccCC
Q psy359          330 LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGE----KPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDKG  405 (405)
Q Consensus       330 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~  405 (405)
                      +.+|+++|+++++|.|.+|++.|.....|..|++.|++.    ++|.|.+|++.|.+...|..|+++|++++++.|..||
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            567999999999999999999999999999999988765    7899999999999999999999999999999999986

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.65  E-value=2.1e-16  Score=117.61  Aligned_cols=85  Identities=38%  Similarity=0.851  Sum_probs=76.9

Q ss_pred             cccceecCC--CcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccc--ccccc
Q psy359          276 RKLIFKCDL--CGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACT--QCDKT  351 (405)
Q Consensus       276 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~--~C~~~  351 (405)
                      ..++|.|..  |++.|.+...|..|++.                                   |+++++|.|+  .|++.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~-----------------------------------h~~~~~~~C~~~~C~~~   56 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRT-----------------------------------HTGEKPYKCTWEGCDWR   56 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHH-----------------------------------HSCCCCEECCSSSCCCE
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHH-----------------------------------hCCCCCeeCCCCCCCCc
Confidence            567899996  99999999988888874                                   4566889997  59999


Q ss_pred             ccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcc
Q psy359          352 FKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       352 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      |.....|..|++.|+++++|.|.+|++.|.+...|..|+++|++
T Consensus        57 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           57 FARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             ESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999864

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=7.4e-17  Score=121.68  Aligned_cols=94  Identities=19%  Similarity=0.392  Sum_probs=68.5

Q ss_pred             HhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcccCcchhhhhhhcccceecCCCcc
Q psy359          208 TRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGN  287 (405)
Q Consensus       208 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~C~~C~~  287 (405)
                      ++.|.++++|+|..|++.|.+...|..|++.|                                     .++|.|.+|++
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H-------------------------------------~~~~~C~~C~~   50 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLC-------------------------------------RNAAVCPYCSL   50 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH-------------------------------------HHSBCCTTTCC
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHC-------------------------------------CCCccCCCCCC
Confidence            34566677777777777777777777777653                                     12577888888


Q ss_pred             cCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCchhHHHHhh-hhC
Q psy359          288 ILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYR-IHT  366 (405)
Q Consensus       288 ~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~  366 (405)
                      .|.....|..|+.                                    |+++++|+|.+|++.|.....|..|++ .|.
T Consensus        51 ~f~~~~~l~~H~~------------------------------------H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   94 (107)
T 1wjp_A           51 RFFSPELKQEHES------------------------------------KCEYKKLTCLECMRTFKSSFSIWRHQVEVHN   94 (107)
T ss_dssp             CBSSHHHHHHHHH------------------------------------HCSTGGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred             ccCCHHHHHHHHH------------------------------------cCCCCCccCccccchhCCHHHHHHHHHHHcC
Confidence            8877777776663                                    345577888888888888888888886 777


Q ss_pred             CCCcccCC
Q psy359          367 GEKPYQCD  374 (405)
Q Consensus       367 ~~~~~~C~  374 (405)
                      ++++|.|+
T Consensus        95 ~~~~~~~~  102 (107)
T 1wjp_A           95 QNNMAPTS  102 (107)
T ss_dssp             CCCCCCCC
T ss_pred             CCCCCCCC
Confidence            88887765

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=9.8e-18  Score=128.35  Aligned_cols=107  Identities=12%  Similarity=0.140  Sum_probs=82.0

Q ss_pred             hHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcccCcchhhhhhhcccce
Q psy359          201 KLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIF  280 (405)
Q Consensus       201 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~  280 (405)
                      ...|..|+++|+++++|.|..|++.|.+...|..|++. ++..                               .....+
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-~~h~-------------------------------~~~~~~   51 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE-TGHY-------------------------------RDDNHE   51 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHH-TCCC-------------------------------BCSCCC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHH-hCcc-------------------------------ccCCCc
Confidence            34577888889999999999999999999999999986 2200                               012235


Q ss_pred             ecCCCcccC--CChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCchhH
Q psy359          281 KCDLCGNIL--SSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHL  358 (405)
Q Consensus       281 ~C~~C~~~f--~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  358 (405)
                      .|.+|++.|  .....|.                                   .|+++|++++||+|.+|++.|.....|
T Consensus        52 ~C~~C~~~f~f~~~~~l~-----------------------------------~H~~~H~~~~~~~C~~C~k~f~~~~~L   96 (115)
T 2dmi_A           52 TDNNNPKRWSKPRKRSLL-----------------------------------EMEGKEDAQKVLKCMYCGHSFESLQDL   96 (115)
T ss_dssp             CCCCCCSCCSSCCCCCCC-----------------------------------CCCCSCCCCSSCBCSSSCCBCSSHHHH
T ss_pred             cCCCCCcccccccHHHHH-----------------------------------HHhhccCCCcceECCCCCCccCCHHHH
Confidence            599999888  6655444                                   455557788999999999999999999


Q ss_pred             HHHhhhhCCCCcccCC
Q psy359          359 TTHYRIHTGEKPYQCD  374 (405)
Q Consensus       359 ~~H~~~h~~~~~~~C~  374 (405)
                      ..|++.|+......++
T Consensus        97 ~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           97 SVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             HHHHHHTTTTTCSCCC
T ss_pred             HHHHHHhCCcccCCCC
Confidence            9999998876655544

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=4e-16  Score=115.12  Aligned_cols=86  Identities=36%  Similarity=0.579  Sum_probs=78.3

Q ss_pred             cCCCCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhc
Q psy359          184 AHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLH  263 (405)
Q Consensus       184 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~  263 (405)
                      .++++|.|.+|++.|.+...|..|++.|+++++|.|..|++.|.+...|..|++.|+                       
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-----------------------   60 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS-----------------------   60 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSC-----------------------
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhC-----------------------
Confidence            467899999999999999999999999999999999999999999999999999865                       


Q ss_pred             ccCcchhhhhhhcccceecCCCcccCCChHHHHHHHhhhcc
Q psy359          264 DAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHM  304 (405)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  304 (405)
                                  ++++|.|.+|++.|.+...|..|++.++.
T Consensus        61 ------------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   89 (96)
T 2dmd_A           61 ------------DERPFKCQICPYASRNSSQLTVHLRSHTG   89 (96)
T ss_dssp             ------------CCCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             ------------CCCCccCCCCCCccCCHHHHHHHHHHhcC
Confidence                        35689999999999999999999995443

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=3.9e-16  Score=114.95  Aligned_cols=90  Identities=31%  Similarity=0.616  Sum_probs=81.1

Q ss_pred             cCCCCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhc
Q psy359          184 AHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLH  263 (405)
Q Consensus       184 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~  263 (405)
                      .++++|.|.+|++.|.+...|..|++.|+++++|.|..|++.|.+...|..|++.+++.                     
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------   61 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS---------------------   61 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCC---------------------
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCC---------------------
Confidence            45678999999999999999999999999999999999999999999999999987641                     


Q ss_pred             ccCcchhhhhhhcccceecCCCcccCCChHHHHHHHhhhccCC
Q psy359          264 DAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGL  306 (405)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  306 (405)
                                  ..++|.|.+|++.|.+...|..|++..|.+.
T Consensus        62 ------------~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           62 ------------VGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             ------------CCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             ------------CCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence                        1368999999999999999999998778664

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.63  E-value=2.9e-16  Score=114.09  Aligned_cols=82  Identities=35%  Similarity=0.814  Sum_probs=74.0

Q ss_pred             ccceecCC--CcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccc--cccccc
Q psy359          277 KLIFKCDL--CGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACT--QCDKTF  352 (405)
Q Consensus       277 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~--~C~~~f  352 (405)
                      ..+|.|..  |++.|.+...|..|++.                                   |+++++|.|+  .|++.|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~-----------------------------------h~~~~~~~C~~~~C~~~f   47 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRT-----------------------------------HTGEKPYHCDWDGCGWKF   47 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTT-----------------------------------SCSSCCEECCSTTTCCEE
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHh-----------------------------------cCCCCCcCCCCCCCCCcc
Confidence            45799998  99999999888887773                                   5567889997  599999


Q ss_pred             cCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhh
Q psy359          353 KKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       353 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  393 (405)
                      .+...|..|++.|.++++|.|+.|++.|.+...|..|+++|
T Consensus        48 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           48 ARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             SSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             CCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999886

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.63  E-value=3.3e-16  Score=111.91  Aligned_cols=82  Identities=35%  Similarity=0.764  Sum_probs=75.3

Q ss_pred             ccccCCCccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhhcHHHHHHhhccCCCCccCccchhccCChHHHHHH
Q psy359          128 TYPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEKSFKRKLHLKVH  207 (405)
Q Consensus       128 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~l~~~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H  207 (405)
                      +|.|..|++.|.+...|..|++.|.+                                +++|.|..|++.|.....|..|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~--------------------------------~~~~~C~~C~~~f~~~~~l~~H   48 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSD--------------------------------TRPYPCQYCGKRFHQKSDMKKH   48 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHT--------------------------------CCCEECSSSCCEESSHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCC--------------------------------CCCeeCCcCChhhCCHHHHHHH
Confidence            48899999999999999999988766                                3679999999999999999999


Q ss_pred             HhhhcCCCCcccccchHhhhChHHHHHHHhhhCC
Q psy359          208 TRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHN  241 (405)
Q Consensus       208 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  241 (405)
                      ++.|+++++|.|..|++.|.+...|..|++.|+|
T Consensus        49 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           49 TFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             HHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            9999999999999999999999999999998753

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.63  E-value=2.2e-16  Score=114.96  Aligned_cols=52  Identities=31%  Similarity=0.809  Sum_probs=26.6

Q ss_pred             CCccCc--cchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhh
Q psy359          187 RKFPCT--FCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKS  238 (405)
Q Consensus       187 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  238 (405)
                      ++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|.+...|..|++.
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   56 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT   56 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHH
Confidence            445554  3555555555555555555555555555555555555544444444

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.62  E-value=3.9e-17  Score=118.47  Aligned_cols=84  Identities=21%  Similarity=0.423  Sum_probs=76.2

Q ss_pred             cceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCchh
Q psy359          278 LIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNH  357 (405)
Q Consensus       278 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  357 (405)
                      ++|.|.+|++.|.+...|..|++.                                   |++++||.|.+|++.|.....
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~-----------------------------------H~~~~~~~C~~C~k~f~~~~~   46 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRT-----------------------------------HTGEKPFACDICGRKFARSDE   46 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHH-----------------------------------HHCCCCEECTTTCCEESSHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHH-----------------------------------cCCCCCccCCCCCCccCCHHH
Confidence            579999999999999988888774                                   456788999999999999999


Q ss_pred             HHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccc
Q psy359          358 LTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       358 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      |..|++.|++ .+|.|..|++.|.+...|..|++.+|+..
T Consensus        47 L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~~h~~~   85 (88)
T 1llm_C           47 RKRHRDIQHI-LPILEDKVEELLSKNYHLENEVARLKKLV   85 (88)
T ss_dssp             HHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHHHHHHh
Confidence            9999999995 88999999999999999999999998754

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=3.2e-16  Score=110.48  Aligned_cols=67  Identities=36%  Similarity=0.707  Sum_probs=64.0

Q ss_pred             hhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccc
Q psy359          335 RLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAV  401 (405)
Q Consensus       335 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  401 (405)
                      ..+.++++|+|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3467889999999999999999999999999999999999999999999999999999999999987

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=9.2e-16  Score=116.24  Aligned_cols=88  Identities=25%  Similarity=0.568  Sum_probs=80.6

Q ss_pred             hccCCCCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhh
Q psy359          182 VHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKH  261 (405)
Q Consensus       182 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h  261 (405)
                      .|.++++|.| .|++.|.+...|..|++.|.++++|.|..|++.|.+...|..|++.|+                     
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~---------------------   61 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT---------------------   61 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTC---------------------
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcC---------------------
Confidence            4678899999 999999999999999999999999999999999999999999998865                     


Q ss_pred             hcccCcchhhhhhhcccceecCCCcccCCChHHHHHHHhhhccC
Q psy359          262 LHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMG  305 (405)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  305 (405)
                                    ++++|.|.+|++.|.....|..|++.+|..
T Consensus        62 --------------~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           62 --------------GIKPYECNICAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             --------------CCCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred             --------------CCCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence                          356899999999999999999999976643

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.58  E-value=1.4e-15  Score=106.16  Aligned_cols=64  Identities=36%  Similarity=0.839  Sum_probs=61.4

Q ss_pred             hcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccc
Q psy359          336 LHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIH  399 (405)
Q Consensus       336 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  399 (405)
                      .+.++++|+|..|++.|.....|..|++.|.++++|+|.+|++.|.+...|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4568899999999999999999999999999999999999999999999999999999999987

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=4.9e-16  Score=114.91  Aligned_cols=73  Identities=16%  Similarity=0.305  Sum_probs=68.0

Q ss_pred             HHHhhhhhcCCCCcccccccccccc-CchhHHHHhhhhCC-CCcccCCccccccCChHHHHHHHHhhcccccccc
Q psy359          329 QLLQHKRLHFPLRPYACTQCDKTFK-KKNHLTTHYRIHTG-EKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAV  401 (405)
Q Consensus       329 ~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  401 (405)
                      .+..|+++|+++++|.|.+|++.|. ....|..|++.|++ +++|.|.+|++.|.+...|..|++.||+++|+..
T Consensus        11 ~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           11 PEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             SCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             cHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            3567888899999999999999999 99999999999999 9999999999999999999999999999998543

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.58  E-value=1.6e-15  Score=109.08  Aligned_cols=78  Identities=29%  Similarity=0.604  Sum_probs=70.7

Q ss_pred             ceec--CCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCcccccc--ccccccC
Q psy359          279 IFKC--DLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQ--CDKTFKK  354 (405)
Q Consensus       279 ~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~  354 (405)
                      +|.|  +.|++.|.+...|..|++.                                   |+++++|+|++  |++.|.+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~-----------------------------------h~~~~~~~C~~~~C~~~f~~   45 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFS-----------------------------------HTQQLPYECPHEGCDKRFSL   45 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHH-----------------------------------HHTTCCEECCSTTCCCEESS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHH-----------------------------------hCCCCCeeCCCCCCcCccCC
Confidence            4889  8899999999888888763                                   45668899998  9999999


Q ss_pred             chhHHHHhhhhCCCCcccCCc---cccccCChHHHHHHHHhhc
Q psy359          355 KNHLTTHYRIHTGEKPYQCDI---CGRGFAQSNDMKKHRRTVH  394 (405)
Q Consensus       355 ~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l~~H~~~~h  394 (405)
                      ...|..|++.|++   |.|..   |++.|.+...|..|+++||
T Consensus        46 ~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           46 PSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            9999999999998   99999   9999999999999999987

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.57  E-value=1.2e-15  Score=100.46  Aligned_cols=58  Identities=28%  Similarity=0.702  Sum_probs=51.9

Q ss_pred             ccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCch
Q psy359          277 KLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKN  356 (405)
Q Consensus       277 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  356 (405)
                      ++||.|.+|++.|...+.|..|+++                                   |++++||+|.+|+++|...+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~-----------------------------------Ht~ekp~~C~~C~k~F~~~~   46 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRA-----------------------------------HLGYRPRSCPECGKCFRDQS   46 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHH-----------------------------------HHTCCCEECTTTCCEESSHH
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHH-----------------------------------hCCCcCeECCCCCCCcCCHH
Confidence            5789999999999999988887773                                   67789999999999999999


Q ss_pred             hHHHHhhhhCCCC
Q psy359          357 HLTTHYRIHTGEK  369 (405)
Q Consensus       357 ~l~~H~~~h~~~~  369 (405)
                      .|..|+++|.|+.
T Consensus        47 ~L~~H~~~Htgep   59 (60)
T 4gzn_C           47 EVNRHLKVHQNKP   59 (60)
T ss_dssp             HHHHHGGGGSCC-
T ss_pred             HHHHHhCccCCCC
Confidence            9999999999875

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.1e-15  Score=104.05  Aligned_cols=64  Identities=25%  Similarity=0.525  Sum_probs=61.0

Q ss_pred             hcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccc
Q psy359          336 LHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIH  399 (405)
Q Consensus       336 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  399 (405)
                      .|.++++|+|.+|++.|.....|..|++.|.++++|.|.+|++.|.+...|..|+++||+++|.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            3678899999999999999999999999999999999999999999999999999999999874

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=3e-15  Score=105.97  Aligned_cols=68  Identities=22%  Similarity=0.462  Sum_probs=63.6

Q ss_pred             CCCCcccccc--ccccccCchhHHHHhh-hhCCCCcccCCc--cccccCChHHHHHHHHhhccccccccccCC
Q psy359          338 FPLRPYACTQ--CDKTFKKKNHLTTHYR-IHTGEKPYQCDI--CGRGFAQSNDMKKHRRTVHKAQIHAVEDKG  405 (405)
Q Consensus       338 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~  405 (405)
                      +++++|.|..  |++.|.+...|..|++ .|.++++|.|.+  |++.|.+...|..|+++|++++||.|+.||
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~   75 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSG   75 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCC
Confidence            4678899987  9999999999999998 799999999999  999999999999999999999999999997

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.5e-15  Score=104.24  Aligned_cols=65  Identities=37%  Similarity=0.826  Sum_probs=62.0

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      +.++|+++++|+|.+|++.|.....|..|++.|.++++|+|.+|++.|.+...|..|+++|+++.
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            56789999999999999999999999999999999999999999999999999999999998874

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=1.9e-15  Score=106.42  Aligned_cols=68  Identities=25%  Similarity=0.472  Sum_probs=62.8

Q ss_pred             HHhhhhhcCCCCccccccccccccCchhHHHHhh-hhCCC-CcccCCccccccCChHHHHHHHHhhcccc
Q psy359          330 LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYR-IHTGE-KPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       330 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      +.+|+++|++++||.|.+|++.|.....|..|++ .|.++ ++|.|.+|++.|.+...|..|++.+|+..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            4579999999999999999999999999999997 56664 89999999999999999999999999875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2.7e-15  Score=110.58  Aligned_cols=68  Identities=16%  Similarity=0.181  Sum_probs=62.8

Q ss_pred             cCCCCccccccccccccCchhHHHHhh-hh---CCCCcccCCccccccCChHHHHHH-HHhhccccccccccC
Q psy359          337 HFPLRPYACTQCDKTFKKKNHLTTHYR-IH---TGEKPYQCDICGRGFAQSNDMKKH-RRTVHKAQIHAVEDK  404 (405)
Q Consensus       337 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~~~~~~~~  404 (405)
                      -.+++||.|.+|++.|.....|..|++ .|   .++++|.|..|++.|.....|..| +++|.+++||.|..+
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            468899999999999999999999997 58   568999999999999999999999 899999999999764

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.53  E-value=5.6e-16  Score=121.10  Aligned_cols=59  Identities=20%  Similarity=0.447  Sum_probs=55.1

Q ss_pred             cCCCCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccc
Q psy359          337 HFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       337 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      |++++||.|.+|++.|.....|..|++.|  +++|.|.+|++.|.+...|..|++.||++.
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            56678999999999999999999999998  889999999999999999999999999875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.53  E-value=5.7e-15  Score=97.32  Aligned_cols=57  Identities=37%  Similarity=0.711  Sum_probs=51.5

Q ss_pred             CCCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcc
Q psy359          339 PLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       339 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      ++++|+|.+|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++||+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            357899999999999999999999999999999999999999999999999999985

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.53  E-value=2.8e-14  Score=105.97  Aligned_cols=83  Identities=34%  Similarity=0.687  Sum_probs=75.4

Q ss_pred             CcccccCC--CccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhhcHHHHHHhhccCCCCccCc--cchhccCCh
Q psy359          126 PLTYPCDQ--CDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCT--FCEKSFKRK  201 (405)
Q Consensus       126 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~l~~~~~~~h~~~~~~~C~--~C~~~f~~~  201 (405)
                      ...|.|..  |++.|.+...|..|++.|.+                                +++|.|.  .|++.|...
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--------------------------------~~~~~C~~~~C~~~f~~~   60 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTG--------------------------------EKPYKCTWEGCDWRFARS   60 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSC--------------------------------CCCEECCSSSCCCEESSH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCC--------------------------------CCCeeCCCCCCCCccCCH
Confidence            44689986  99999999999999998876                                3579996  599999999


Q ss_pred             HHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhC
Q psy359          202 LHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSH  240 (405)
Q Consensus       202 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  240 (405)
                      ..|..|++.|+++++|.|..|++.|.+...|..|++.|.
T Consensus        61 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           61 DELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999865

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.52  E-value=9.7e-16  Score=110.99  Aligned_cols=83  Identities=36%  Similarity=0.658  Sum_probs=76.0

Q ss_pred             CCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhcccC
Q psy359          187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLHDAH  266 (405)
Q Consensus       187 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~~~~  266 (405)
                      ++|.|.+|++.|.....|..|+++|.++++|.|..|++.|.+...|..|++.+|+                         
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-------------------------   56 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-------------------------   56 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-------------------------
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-------------------------
Confidence            6899999999999999999999999999999999999999999999999998752                         


Q ss_pred             cchhhhhhhcccceecCCCcccCCChHHHHHHHhhhccC
Q psy359          267 PEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMG  305 (405)
Q Consensus       267 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  305 (405)
                                 .+|.|..|++.|.+...|..|++..|..
T Consensus        57 -----------~~~~c~~C~~~f~~~~~L~~H~~~~h~~   84 (88)
T 1llm_C           57 -----------LPILEDKVEELLSKNYHLENEVARLKKL   84 (88)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CcchHHHHHHHHHHHhhhHHHHHHHHHH
Confidence                       4689999999999999999999977754

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1e-14  Score=103.26  Aligned_cols=72  Identities=29%  Similarity=0.738  Sum_probs=64.1

Q ss_pred             cccceecCC--CcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCcccccc--cccc
Q psy359          276 RKLIFKCDL--CGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQ--CDKT  351 (405)
Q Consensus       276 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~--C~~~  351 (405)
                      ++++|.|..  |++.|.+...|..|++..                                  |+++++|+|.+  |++.
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~----------------------------------H~~~~~~~C~~~~C~k~   49 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQ----------------------------------HIHQKSFSCPEPACGKS   49 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHG----------------------------------GGSCCCEECSCTTTCCE
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHH----------------------------------hCCCCCeECCCCCCcCc
Confidence            566899987  999999999999888743                                  44568899999  9999


Q ss_pred             ccCchhHHHHhhhhCCCCcccCCccccccC
Q psy359          352 FKKKNHLTTHYRIHTGEKPYQCDICGRGFA  381 (405)
Q Consensus       352 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  381 (405)
                      |.+...|..|++.|+++++|.|.+|++.|.
T Consensus        50 f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           50 FNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             ESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             cCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            999999999999999999999999999984

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=6.9e-15  Score=107.84  Aligned_cols=70  Identities=17%  Similarity=0.223  Sum_probs=60.0

Q ss_pred             HHHhhhhhcCCCCccccccccccc-cCchhHHHHhhhhCCCCcccCCccccccCChHHHHHH-HHhhccccccc
Q psy359          329 QLLQHKRLHFPLRPYACTQCDKTF-KKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKH-RRTVHKAQIHA  400 (405)
Q Consensus       329 ~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~~~~  400 (405)
                      .|..|++.+.++++|.|.+|++.| .....|..|++.| ++++|.|.+|++.|.....|..| +++| .++||.
T Consensus        21 ~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H-~~~p~~   92 (96)
T 2ctd_A           21 LEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANH-NSLPSG   92 (96)
T ss_dssp             HHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHT-CCCSSC
T ss_pred             HHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhc-CCCCCC
Confidence            344555556778899999999999 9999999999999 99999999999999999999999 6655 556553

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=6.4e-15  Score=100.31  Aligned_cols=62  Identities=24%  Similarity=0.577  Sum_probs=57.7

Q ss_pred             hhcCCCCccccccccccccCchhHHHHhhh-h-CCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          335 RLHFPLRPYACTQCDKTFKKKNHLTTHYRI-H-TGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       335 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ++|++++||.|..|++.|.+...|..|++. | .++++|.|++|++.|.+...|..|++.+|+.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~i   66 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI   66 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC-
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcCC
Confidence            568889999999999999999999999998 6 4899999999999999999999999999973

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.49  E-value=2.8e-14  Score=103.47  Aligned_cols=82  Identities=35%  Similarity=0.711  Sum_probs=74.1

Q ss_pred             CcccccCC--CccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhhcHHHHHHhhccCCCCccCc--cchhccCCh
Q psy359          126 PLTYPCDQ--CDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCT--FCEKSFKRK  201 (405)
Q Consensus       126 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~l~~~~~~~h~~~~~~~C~--~C~~~f~~~  201 (405)
                      +.+|.|..  |++.|.+...|..|++.|.+                                +++|.|.  .|++.|...
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--------------------------------~~~~~C~~~~C~~~f~~~   50 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTG--------------------------------EKPYHCDWDGCGWKFARS   50 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCS--------------------------------SCCEECCSTTTCCEESSH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCC--------------------------------CCCcCCCCCCCCCccCCH
Confidence            34689999  99999999999999988766                                3679997  599999999


Q ss_pred             HHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhh
Q psy359          202 LHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSS  239 (405)
Q Consensus       202 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  239 (405)
                      ..|..|++.|.++++|.|..|++.|.+...|..|++.|
T Consensus        51 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           51 DELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             HHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             HHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhh
Confidence            99999999999999999999999999999999999874

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.49  E-value=2.1e-14  Score=101.87  Aligned_cols=63  Identities=21%  Similarity=0.434  Sum_probs=57.6

Q ss_pred             hhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          334 KRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       334 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      +..+...++|.|++|++.|.+...|..|++.|++++||.|.+|++.|.+...|..|++..|..
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            345667889999999999999999999999999999999999999999999999999876654

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.48  E-value=3.1e-14  Score=93.72  Aligned_cols=56  Identities=30%  Similarity=0.706  Sum_probs=54.1

Q ss_pred             ccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccc
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      ||+|.+|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            58999999999999999999999999999999999999999999999999999875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.45  E-value=5.9e-14  Score=100.73  Aligned_cols=78  Identities=35%  Similarity=0.631  Sum_probs=71.6

Q ss_pred             CccC--ccchhccCChHHHHHHHhhhcCCCCccccc--chHhhhChHHHHHHHhhhCCCCcccccCCCCcchHHhhhhhc
Q psy359          188 KFPC--TFCEKSFKRKLHLKVHTRTHTGEKPYACYL--CDKRFAQISDRIKHLKSSHNFDFESVKNKTTPLTRYLNKHLH  263 (405)
Q Consensus       188 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~l~~h~~  263 (405)
                      ||.|  ..|++.|.....|..|+++|.++++|+|..  |++.|.+...|..|++.|+                       
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-----------------------   57 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA-----------------------   57 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH-----------------------
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhC-----------------------
Confidence            5899  889999999999999999999999999988  9999999999999998854                       


Q ss_pred             ccCcchhhhhhhcccceecCC---CcccCCChHHHHHHHhhhc
Q psy359          264 DAHPEAIKTERERKLIFKCDL---CGNILSSKHILQEHVRVVH  303 (405)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~C~~---C~~~f~~~~~l~~H~~~~h  303 (405)
                                  +   |.|..   |++.|.+.+.|..|++.+|
T Consensus        58 ------------~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           58 ------------G---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             ------------S---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             ------------C---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence                        2   89999   9999999999999998644

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=5.8e-14  Score=103.38  Aligned_cols=73  Identities=21%  Similarity=0.439  Sum_probs=63.2

Q ss_pred             hcccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccC
Q psy359          275 ERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKK  354 (405)
Q Consensus       275 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  354 (405)
                      .++++|.|..|++.|...+.|..|++..|.+.                               .+++||.|.+|++.|..
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~-------------------------------~~ekpf~C~~Cgk~F~~   62 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV-------------------------------VLNSSYVCVECNFLTKR   62 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSC-------------------------------CCSCCEEETTTTEEESS
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC-------------------------------CCCCCcCCCCCCcccCC
Confidence            37889999999999999999999987545321                               35688999999999999


Q ss_pred             chhHHHH-hhhhCCCCcccCCcccc
Q psy359          355 KNHLTTH-YRIHTGEKPYQCDICGR  378 (405)
Q Consensus       355 ~~~l~~H-~~~h~~~~~~~C~~C~~  378 (405)
                      ...|..| ++.|.+++||.|.++..
T Consensus        63 ~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           63 YDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             THHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             HHHHHHHHHHhcCCCCCeeCCcccC
Confidence            9999999 89999999999998654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=5.4e-14  Score=99.16  Aligned_cols=62  Identities=26%  Similarity=0.496  Sum_probs=57.3

Q ss_pred             hcCCCCccccccccccccCchhHHHHhhhhCC---CCcccCCccccccCChHHHHHHHHhhcccc
Q psy359          336 LHFPLRPYACTQCDKTFKKKNHLTTHYRIHTG---EKPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       336 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      +|++++||+|.+|++.|.....|..|++.|.+   +++|.|.+|++.|.+...|..|++.+|...
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            37889999999999999999999999999986   899999999999999999999997777654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=4.7e-16  Score=108.38  Aligned_cols=69  Identities=16%  Similarity=0.365  Sum_probs=65.2

Q ss_pred             HHHhhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          329 QLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       329 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|..|+++|+++++|.|.+|++.|.....|..       +++|.|+.|++.|.+...|..|+++|++++||.|+.|
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            46789999999999999999999999998877       7899999999999999999999999999999999987

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.7e-13  Score=96.33  Aligned_cols=63  Identities=38%  Similarity=0.768  Sum_probs=57.1

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCc
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKK  355 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  355 (405)
                      ++++|.|.+|++.|.....|..|++.                                   |+++++|+|.+|++.|...
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~-----------------------------------h~~~~~~~C~~C~~~f~~~   59 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRT-----------------------------------HTGEKPYKCDECGKAFIQR   59 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTT-----------------------------------TCCSCSEECSSSCCEESSH
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHH-----------------------------------cCCCcCeeCCCCCCccCCH
Confidence            56789999999999999988887763                                   5667889999999999999


Q ss_pred             hhHHHHhhhhCCCCcccC
Q psy359          356 NHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       356 ~~l~~H~~~h~~~~~~~C  373 (405)
                      ..|..|++.|++++||+|
T Consensus        60 ~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           60 SHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             HHHHHHGGGSCCCCCCCC
T ss_pred             HHHHHHHHHhCCCCCCCC
Confidence            999999999999999998

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=3.5e-13  Score=96.90  Aligned_cols=74  Identities=22%  Similarity=0.469  Sum_probs=64.9

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCc
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKK  355 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  355 (405)
                      ++++|.|.+|++.|.+...|..|++.+|...                               ..+++|+|.+|++.|...
T Consensus        12 ~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~-------------------------------~~~~~~~C~~C~~~f~~~   60 (86)
T 1x6h_A           12 GEKPYACSHCDKTFRQKQLLDMHFKRYHDPN-------------------------------FVPAAFVCSKCGKTFTRR   60 (86)
T ss_dssp             CCCCEECSSSSCEESSHHHHHHHHHHTTCSS-------------------------------CCCCCEECSSSCCEESCH
T ss_pred             CCCCCcCCCCCCccCCHHHHHHHHHHhcCCc-------------------------------CCCcceECCCCCChhCCH
Confidence            5778999999999999999999998654331                               123689999999999999


Q ss_pred             hhHHHHhhhhCCCCcccCCcccccc
Q psy359          356 NHLTTHYRIHTGEKPYQCDICGRGF  380 (405)
Q Consensus       356 ~~l~~H~~~h~~~~~~~C~~C~~~f  380 (405)
                      ..|..|++.|++++++.|..|+.+|
T Consensus        61 ~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           61 NTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             HHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             HHHHHHHHHccCCCCcccCCCCCCC
Confidence            9999999999999999999999876

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=2.6e-13  Score=90.28  Aligned_cols=56  Identities=38%  Similarity=0.969  Sum_probs=51.6

Q ss_pred             CccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      +||+|.+|++.|.....|..|++.|+++++|.|++|++.|.+...|..|++..|..
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            47999999999999999999999999999999999999999999999998654543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=2.1e-13  Score=94.70  Aligned_cols=60  Identities=47%  Similarity=0.954  Sum_probs=55.9

Q ss_pred             hhcCCCCccccc--cccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhc
Q psy359          335 RLHFPLRPYACT--QCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVH  394 (405)
Q Consensus       335 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  394 (405)
                      .++.++++|.|+  .|++.|.....|..|++.|.++++|.|++|++.|.+...|..|+++|+
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            457788999998  599999999999999999999999999999999999999999998863

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.36  E-value=1.7e-13  Score=106.87  Aligned_cols=113  Identities=19%  Similarity=0.247  Sum_probs=81.0

Q ss_pred             hhccCCCCccCccchhccCChHHHHHHHhh---hcCCCCcccccchHhhh------ChHHHHHHHhhhCCCCcccccCCC
Q psy359          181 EVHAHERKFPCTFCEKSFKRKLHLKVHTRT---HTGEKPYACYLCDKRFA------QISDRIKHLKSSHNFDFESVKNKT  251 (405)
Q Consensus       181 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~------~~~~l~~H~~~~h~~~~c~~c~~~  251 (405)
                      .++.|.++|.|...+-...  ..+..+.+.   ...++.+.|.+|.+.|.      ....|..|+ .++           
T Consensus         5 ~~~~~~k~~~~~~k~~~~~--~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~-----------   70 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIH--VTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASK-----------   70 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEE--CCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHH-----------
T ss_pred             hhcccccccccccCCeeee--ecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhC-----------
Confidence            3566778888876554322  223334222   22346688998888877      344444444 222           


Q ss_pred             CcchHHhhhhhcccCcchhhhhhhcccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHH
Q psy359          252 TPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLL  331 (405)
Q Consensus       252 ~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~  331 (405)
                                              ++++|.|++|++.|.....|..|++.                              
T Consensus        71 ------------------------~~~~~~C~~C~k~f~~~~~l~~H~~~------------------------------   96 (129)
T 2wbt_A           71 ------------------------AISQFVCPLCLMPFSSSVSLKQHIRY------------------------------   96 (129)
T ss_dssp             ------------------------HHCSEECTTTCCEESSHHHHHHHHHH------------------------------
T ss_pred             ------------------------CCCCeECCCCCcccCCHhHHHHHHHH------------------------------
Confidence                                    56789999999999999999888874                              


Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCC
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGE  368 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  368 (405)
                           |  ++||.|.+|++.|.....|..|++.|+++
T Consensus        97 -----H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           97 -----T--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             -----T--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             -----C--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence                 3  46799999999999999999999999876

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.36  E-value=6.9e-13  Score=92.34  Aligned_cols=61  Identities=41%  Similarity=0.773  Sum_probs=55.1

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCc
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKK  355 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  355 (405)
                      ++++|.|..|++.|.+...|..|++.                                   |+++++|+|.+|++.|...
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~-----------------------------------H~~~~~~~C~~C~k~f~~~   58 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTV-----------------------------------HTGEKPYRCNICGAQFNRP   58 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHH-----------------------------------HCCCCSEECTTTCCEESCH
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHH-----------------------------------cCCCCCEECCCCCchhCCH
Confidence            67789999999999999988888773                                   5667889999999999999


Q ss_pred             hhHHHHhhhhCCCCcc
Q psy359          356 NHLTTHYRIHTGEKPY  371 (405)
Q Consensus       356 ~~l~~H~~~h~~~~~~  371 (405)
                      ..|..|++.|++++||
T Consensus        59 ~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           59 ANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             HHHHHHHHHHCCSCCC
T ss_pred             HHHHHHHHhcCCCCCC
Confidence            9999999999999886

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=1e-12  Score=96.37  Aligned_cols=62  Identities=23%  Similarity=0.399  Sum_probs=58.3

Q ss_pred             ccccccccccccCchhHHHHhhh-hCCCCc--------ccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRI-HTGEKP--------YQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|.|..|++.|.....|..|++. |.++++        |.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47899999999999999999998 888877        999999999999999999999999999999963

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.29  E-value=1.4e-12  Score=85.65  Aligned_cols=56  Identities=39%  Similarity=0.752  Sum_probs=50.8

Q ss_pred             CCCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCC
Q psy359          186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHN  241 (405)
Q Consensus       186 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  241 (405)
                      +++|.|.+|++.|.+...|..|+++|++++||.|..|++.|.+...|..|++.+|+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            56899999999999999999999999999999999999999999999999998873

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.29  E-value=1.6e-12  Score=92.17  Aligned_cols=62  Identities=21%  Similarity=0.391  Sum_probs=56.4

Q ss_pred             HhhccCCCCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCC
Q psy359          180 NEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHN  241 (405)
Q Consensus       180 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  241 (405)
                      +..+...++|.|.+|++.|.....|..|+++|++++||.|..|++.|.....|..|++..|.
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            34556678899999999999999999999999999999999999999999999999977664

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=2.4e-12  Score=88.44  Aligned_cols=61  Identities=28%  Similarity=0.466  Sum_probs=57.1

Q ss_pred             ccCCCCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCCCC
Q psy359          183 HAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFD  243 (405)
Q Consensus       183 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  243 (405)
                      |.++++|.|.+|++.|.....|..|+++|.++++|+|..|++.|.+...|..|++.+++..
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            5677899999999999999999999999999999999999999999999999999988743

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=1.5e-12  Score=88.31  Aligned_cols=62  Identities=24%  Similarity=0.487  Sum_probs=56.8

Q ss_pred             HhhccCCCCccCccchhccCChHHHHHHHhh-h-cCCCCcccccchHhhhChHHHHHHHhhhCC
Q psy359          180 NEVHAHERKFPCTFCEKSFKRKLHLKVHTRT-H-TGEKPYACYLCDKRFAQISDRIKHLKSSHN  241 (405)
Q Consensus       180 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  241 (405)
                      +..|.++++|.|..|++.|.....|..|++. | .++++|.|+.|++.|.+...|..|++.+|+
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            4567888999999999999999999999988 6 478999999999999999999999999886

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=2.7e-12  Score=88.75  Aligned_cols=62  Identities=40%  Similarity=0.743  Sum_probs=58.4

Q ss_pred             HhhccCCCCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCC
Q psy359          180 NEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHN  241 (405)
Q Consensus       180 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  241 (405)
                      ..+|.++++|.|.+|++.|.....|..|++.|.++++|+|..|++.|.+...|..|++.|++
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   67 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS   67 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            45678889999999999999999999999999999999999999999999999999999765

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=5.4e-12  Score=92.32  Aligned_cols=62  Identities=16%  Similarity=0.296  Sum_probs=52.2

Q ss_pred             cccceecCCCcccC-CChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccC
Q psy359          276 RKLIFKCDLCGNIL-SSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKK  354 (405)
Q Consensus       276 ~~~~~~C~~C~~~f-~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  354 (405)
                      ++++|.|+.|++.| .+...|..|++.                                   | ++++|.|.+|++.|..
T Consensus        31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~-----------------------------------h-~~k~~~C~~Cgk~F~~   74 (96)
T 2ctd_A           31 DKGSVSCPTCQAVGRKTIEGLKKHMEN-----------------------------------C-KQEMFTCHHCGKQLRS   74 (96)
T ss_dssp             HTSCEECTTTCSCEESSHHHHHHHHHH-----------------------------------H-CCCCCCCSSSCCCCSS
T ss_pred             CCCCcCCCCCCCCcccCHHHHHHHHHH-----------------------------------H-CCCCeECCCCCCeeCC
Confidence            46789999999999 899888888773                                   4 5688999999999999


Q ss_pred             chhHHHH-hhhhCCCCcccC
Q psy359          355 KNHLTTH-YRIHTGEKPYQC  373 (405)
Q Consensus       355 ~~~l~~H-~~~h~~~~~~~C  373 (405)
                      ...|..| ++.|.++..|.+
T Consensus        75 ~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           75 LAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             HHHHHHHHHHHTCCCSSCSC
T ss_pred             HHHHHHHhHHhcCCCCCCCC
Confidence            9999999 888887655544

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.6e-12  Score=80.19  Aligned_cols=45  Identities=36%  Similarity=0.620  Sum_probs=34.2

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            466677777777777777777777777777777777777777776

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.25  E-value=3e-12  Score=79.88  Aligned_cols=44  Identities=30%  Similarity=0.583  Sum_probs=31.8

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777766

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=2.1e-12  Score=87.59  Aligned_cols=60  Identities=23%  Similarity=0.439  Sum_probs=55.3

Q ss_pred             cCCCCccccccccccccCchhHHHHhhhhCCCCcccCC-ccccccCChHHHHHHHHhhccccc
Q psy359          337 HFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD-ICGRGFAQSNDMKKHRRTVHKAQI  398 (405)
Q Consensus       337 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~~h~~~~  398 (405)
                      ..+++||.|.+|++.|. ...|..|++. .+++||.|+ .|++.|.....|..|+++|-+..|
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            35678999999999999 9999999999 999999999 999999999999999999877654

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.25  E-value=2.7e-12  Score=80.12  Aligned_cols=45  Identities=24%  Similarity=0.468  Sum_probs=34.2

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            466777777777777777777777777777777777777777776

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.25  E-value=2.6e-12  Score=80.21  Aligned_cols=45  Identities=36%  Similarity=0.640  Sum_probs=28.1

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            355556666666666666666666666666666666666666655

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.6e-12  Score=80.18  Aligned_cols=45  Identities=31%  Similarity=0.592  Sum_probs=31.6

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            366667777777777777777777777777777777777777665

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.9e-12  Score=79.99  Aligned_cols=45  Identities=36%  Similarity=0.622  Sum_probs=33.4

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777766

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.8e-12  Score=80.06  Aligned_cols=44  Identities=39%  Similarity=0.583  Sum_probs=28.2

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||.|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666655

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.7e-12  Score=80.12  Aligned_cols=45  Identities=33%  Similarity=0.552  Sum_probs=33.9

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      .|+++|++++||+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777766

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.24  E-value=2.7e-12  Score=80.11  Aligned_cols=45  Identities=38%  Similarity=0.593  Sum_probs=34.5

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||.|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777776

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.9e-12  Score=80.00  Aligned_cols=44  Identities=30%  Similarity=0.500  Sum_probs=27.7

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666655

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.3e-12  Score=79.72  Aligned_cols=45  Identities=29%  Similarity=0.482  Sum_probs=28.4

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            355566666666666666666666666666666666666666655

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.24  E-value=2.8e-12  Score=80.03  Aligned_cols=45  Identities=31%  Similarity=0.561  Sum_probs=31.3

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||.|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356666777777777777777777777777777777777777665

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.8e-12  Score=80.03  Aligned_cols=44  Identities=34%  Similarity=0.582  Sum_probs=27.8

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666655

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.9e-12  Score=80.00  Aligned_cols=45  Identities=33%  Similarity=0.527  Sum_probs=32.4

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|+++++|+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466667777777777777777777777777777777777777766

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.9e-12  Score=79.98  Aligned_cols=45  Identities=40%  Similarity=0.715  Sum_probs=29.0

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|+++++|+|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            355566666666666666666666666666666666666666655

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.3e-12  Score=79.71  Aligned_cols=45  Identities=33%  Similarity=0.622  Sum_probs=30.0

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            355666666666666666666666666666666666666666665

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.6e-12  Score=80.22  Aligned_cols=44  Identities=39%  Similarity=0.599  Sum_probs=26.9

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666555

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.1e-12  Score=79.85  Aligned_cols=45  Identities=36%  Similarity=0.616  Sum_probs=31.9

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      .|+++|++++||+|++|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            366667777777777777777777777777777777777777766

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.4e-12  Score=79.65  Aligned_cols=45  Identities=31%  Similarity=0.496  Sum_probs=31.1

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356666677777777777777777777777777777777777665

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.3e-12  Score=79.74  Aligned_cols=45  Identities=36%  Similarity=0.617  Sum_probs=31.2

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||.|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356666677777777777777777777777777777777777665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.7e-12  Score=79.51  Aligned_cols=45  Identities=29%  Similarity=0.519  Sum_probs=28.6

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|+++++|.|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            355566666666666666666666666666666666666666654

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4e-12  Score=79.32  Aligned_cols=45  Identities=36%  Similarity=0.537  Sum_probs=32.2

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||.|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466667777777777777777777777777777777777777766

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.4e-12  Score=79.63  Aligned_cols=44  Identities=27%  Similarity=0.459  Sum_probs=27.0

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|+++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666555

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=3.2e-12  Score=78.92  Aligned_cols=44  Identities=27%  Similarity=0.449  Sum_probs=23.7

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.1e-12  Score=79.27  Aligned_cols=44  Identities=27%  Similarity=0.500  Sum_probs=31.3

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777666

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.1e-12  Score=79.81  Aligned_cols=45  Identities=36%  Similarity=0.628  Sum_probs=32.4

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356667777777777777777777777777777777777777766

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.6e-12  Score=79.56  Aligned_cols=45  Identities=27%  Similarity=0.356  Sum_probs=30.7

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356666666777777777777777777777766666666766665

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4e-12  Score=79.30  Aligned_cols=45  Identities=31%  Similarity=0.591  Sum_probs=35.0

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|+++++|+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777788888888888888888888777777777777776

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.9e-12  Score=79.97  Aligned_cols=45  Identities=33%  Similarity=0.617  Sum_probs=30.7

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356666666777777777777777777777766666666776665

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.9e-12  Score=80.00  Aligned_cols=44  Identities=39%  Similarity=0.627  Sum_probs=26.4

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55555666666666666666666666666666666666666554

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.9e-12  Score=79.99  Aligned_cols=44  Identities=30%  Similarity=0.484  Sum_probs=25.6

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||.|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555554

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.23  E-value=4.1e-12  Score=79.29  Aligned_cols=45  Identities=31%  Similarity=0.560  Sum_probs=33.5

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      .|+++|++++||.|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777766

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.3e-12  Score=79.18  Aligned_cols=44  Identities=34%  Similarity=0.548  Sum_probs=29.9

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666666667776677666666666666666666666666665

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.1e-12  Score=79.26  Aligned_cols=44  Identities=34%  Similarity=0.591  Sum_probs=30.7

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|+++++|+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56666677777777777777777777777777777777777665

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=3.7e-12  Score=79.50  Aligned_cols=45  Identities=24%  Similarity=0.296  Sum_probs=33.0

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466667777777777777777777777777777777777777766

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=5e-12  Score=88.67  Aligned_cols=65  Identities=28%  Similarity=0.579  Sum_probs=58.3

Q ss_pred             HHhhccCCCCccCccchhccCChHHHHHHHh-hhcCC-CCcccccchHhhhChHHHHHHHhhhCCCC
Q psy359          179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTR-THTGE-KPYACYLCDKRFAQISDRIKHLKSSHNFD  243 (405)
Q Consensus       179 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  243 (405)
                      |++.|.++++|.|.+|++.|.....|..|++ .|.++ ++|+|..|++.|.+...|..|++.+|+.+
T Consensus         6 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             cccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            3678888999999999999999999999997 56664 89999999999999999999999988743

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=4.1e-12  Score=79.28  Aligned_cols=45  Identities=33%  Similarity=0.509  Sum_probs=32.9

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      .|+++|+++++|+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366667777777777777777777777777777777777777766

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.5e-12  Score=79.62  Aligned_cols=45  Identities=38%  Similarity=0.614  Sum_probs=31.4

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|+++++|+|.+|++.|.....|..|++.|.++++|+|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            356666777777777777777777777777777777777777665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3e-12  Score=79.87  Aligned_cols=45  Identities=33%  Similarity=0.628  Sum_probs=35.2

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|+++++|.|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466777777888888888888888888888888887788888776

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.4e-12  Score=79.15  Aligned_cols=44  Identities=39%  Similarity=0.631  Sum_probs=26.7

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||.|.+|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=3.4e-12  Score=94.04  Aligned_cols=67  Identities=16%  Similarity=0.283  Sum_probs=60.8

Q ss_pred             HHHHhhccCCCCccCccchhccC-ChHHHHHHHhhhcC-CCCcccccchHhhhChHHHHHHHhhhCCCC
Q psy359          177 AHHNEVHAHERKFPCTFCEKSFK-RKLHLKVHTRTHTG-EKPYACYLCDKRFAQISDRIKHLKSSHNFD  243 (405)
Q Consensus       177 ~~~~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  243 (405)
                      ..|+..|.++++|.|.+|++.|. ....|..|+++|++ +++|.|..|++.|.+...|..|++.+|+..
T Consensus        13 ~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A           13 EQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             SHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSC
T ss_pred             HHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCC
Confidence            34567777789999999999999 99999999999998 899999999999999999999999988743

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=5.3e-12  Score=78.74  Aligned_cols=44  Identities=27%  Similarity=0.471  Sum_probs=29.5

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55666666666666666666666666666666666666666665

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.6e-12  Score=79.01  Aligned_cols=44  Identities=30%  Similarity=0.551  Sum_probs=25.0

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555554

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.2e-12  Score=79.25  Aligned_cols=45  Identities=29%  Similarity=0.544  Sum_probs=32.6

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      .|+++|+++++|+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            366667777777777777777777777777777777777777766

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.21  E-value=6.1e-12  Score=78.45  Aligned_cols=44  Identities=36%  Similarity=0.579  Sum_probs=31.3

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|+++++|+|.+|++.|.....|..|++.|.++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777666

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.3e-12  Score=78.77  Aligned_cols=45  Identities=36%  Similarity=0.617  Sum_probs=31.1

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +|+++|+++++|+|.+|++.|.....|..|++.|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366666777777777777777777777777777777777777654

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=5.3e-12  Score=77.92  Aligned_cols=44  Identities=20%  Similarity=0.422  Sum_probs=42.2

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      |++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.20  E-value=6.6e-12  Score=78.31  Aligned_cols=45  Identities=29%  Similarity=0.584  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=6.5e-12  Score=78.35  Aligned_cols=44  Identities=18%  Similarity=0.230  Sum_probs=27.9

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666655

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.9e-12  Score=78.53  Aligned_cols=45  Identities=27%  Similarity=0.497  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.2e-12  Score=78.44  Aligned_cols=45  Identities=27%  Similarity=0.449  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6e-12  Score=78.50  Aligned_cols=45  Identities=27%  Similarity=0.540  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.19  E-value=6.7e-12  Score=78.28  Aligned_cols=45  Identities=24%  Similarity=0.525  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.8e-12  Score=77.98  Aligned_cols=45  Identities=24%  Similarity=0.510  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.4e-12  Score=78.07  Aligned_cols=45  Identities=27%  Similarity=0.571  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|+|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.19  E-value=1.4e-11  Score=80.68  Aligned_cols=54  Identities=37%  Similarity=0.666  Sum_probs=51.6

Q ss_pred             CccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCC
Q psy359          188 KFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHN  241 (405)
Q Consensus       188 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  241 (405)
                      ||.|..|++.|.....|..|+++|.++++|.|..|++.|.+...|..|++.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            589999999999999999999999999999999999999999999999998775

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.8e-12  Score=78.59  Aligned_cols=45  Identities=27%  Similarity=0.591  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.9e-12  Score=78.22  Aligned_cols=45  Identities=22%  Similarity=0.435  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.8e-12  Score=78.25  Aligned_cols=45  Identities=20%  Similarity=0.531  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.8e-12  Score=78.13  Aligned_cols=45  Identities=33%  Similarity=0.596  Sum_probs=32.7

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhh-hhCCCCcccCCcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYR-IHTGEKPYQCDIC  376 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  376 (405)
                      .|+++|++++||+|.+|++.|.....|..|++ .|.++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            36666777777777777777777777777777 7777777777766

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.5e-12  Score=78.06  Aligned_cols=45  Identities=27%  Similarity=0.584  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7e-12  Score=78.19  Aligned_cols=44  Identities=32%  Similarity=0.514  Sum_probs=25.3

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|+++++|+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555554

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.8e-12  Score=77.72  Aligned_cols=45  Identities=29%  Similarity=0.541  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999986

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.4e-12  Score=78.08  Aligned_cols=45  Identities=24%  Similarity=0.572  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.8e-12  Score=78.25  Aligned_cols=45  Identities=27%  Similarity=0.506  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.7e-12  Score=78.00  Aligned_cols=45  Identities=27%  Similarity=0.538  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.3e-12  Score=78.42  Aligned_cols=45  Identities=27%  Similarity=0.542  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.1e-12  Score=78.16  Aligned_cols=45  Identities=29%  Similarity=0.615  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.4e-12  Score=78.07  Aligned_cols=45  Identities=24%  Similarity=0.432  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8e-12  Score=77.93  Aligned_cols=45  Identities=22%  Similarity=0.502  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.17  E-value=7.6e-12  Score=78.02  Aligned_cols=45  Identities=22%  Similarity=0.494  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9e-12  Score=77.68  Aligned_cols=45  Identities=27%  Similarity=0.561  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.8e-12  Score=78.25  Aligned_cols=45  Identities=29%  Similarity=0.565  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|+|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.5e-12  Score=78.36  Aligned_cols=45  Identities=27%  Similarity=0.538  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9.8e-12  Score=77.49  Aligned_cols=45  Identities=27%  Similarity=0.516  Sum_probs=42.9

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478889999999999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.8e-12  Score=78.57  Aligned_cols=45  Identities=18%  Similarity=0.416  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.17  E-value=7.3e-12  Score=78.11  Aligned_cols=45  Identities=18%  Similarity=0.336  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|+|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            478899999999999999999999999999999999999999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.1e-11  Score=77.24  Aligned_cols=44  Identities=36%  Similarity=0.665  Sum_probs=27.5

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |+++|+++++|+|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666553

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.6e-12  Score=77.78  Aligned_cols=45  Identities=27%  Similarity=0.466  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9.1e-12  Score=77.67  Aligned_cols=45  Identities=29%  Similarity=0.586  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=6.6e-12  Score=78.30  Aligned_cols=45  Identities=22%  Similarity=0.417  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.2e-12  Score=78.13  Aligned_cols=45  Identities=31%  Similarity=0.610  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.9e-12  Score=77.70  Aligned_cols=45  Identities=27%  Similarity=0.469  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.3e-12  Score=78.10  Aligned_cols=45  Identities=24%  Similarity=0.496  Sum_probs=42.9

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478889999999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.16  E-value=6.4e-12  Score=78.37  Aligned_cols=45  Identities=22%  Similarity=0.425  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.5e-11  Score=86.48  Aligned_cols=61  Identities=25%  Similarity=0.476  Sum_probs=56.2

Q ss_pred             ccCCCCccCccchhccCChHHHHHHHhhhcC---CCCcccccchHhhhChHHHHHHHhhhCCCC
Q psy359          183 HAHERKFPCTFCEKSFKRKLHLKVHTRTHTG---EKPYACYLCDKRFAQISDRIKHLKSSHNFD  243 (405)
Q Consensus       183 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  243 (405)
                      |.++++|.|.+|++.|.....|..|+++|++   +++|.|..|++.|.....|..|++.+|...
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            6788999999999999999999999999986   799999999999999999999998877633

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=7.9e-12  Score=77.96  Aligned_cols=45  Identities=29%  Similarity=0.545  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.2e-11  Score=77.18  Aligned_cols=45  Identities=24%  Similarity=0.548  Sum_probs=42.9

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            478889999999999999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.16  E-value=8.6e-12  Score=77.77  Aligned_cols=45  Identities=29%  Similarity=0.510  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.2e-11  Score=77.12  Aligned_cols=45  Identities=20%  Similarity=0.200  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=1.8e-11  Score=79.14  Aligned_cols=47  Identities=32%  Similarity=0.704  Sum_probs=44.0

Q ss_pred             hcCCCCccccccccccccCchhHHHHhh-hhCCCCcccCCccccccCC
Q psy359          336 LHFPLRPYACTQCDKTFKKKNHLTTHYR-IHTGEKPYQCDICGRGFAQ  382 (405)
Q Consensus       336 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  382 (405)
                      .|++++||.|.+|++.|.....|..|++ .|.++++|.|.+|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4678899999999999999999999997 8999999999999999986

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.3e-12  Score=77.86  Aligned_cols=45  Identities=24%  Similarity=0.568  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9.7e-12  Score=77.53  Aligned_cols=45  Identities=29%  Similarity=0.539  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.15  E-value=1.7e-11  Score=84.66  Aligned_cols=58  Identities=45%  Similarity=0.875  Sum_probs=53.5

Q ss_pred             hcCCCCcccccc--ccccccCchhHHHHhhhhCCCCcccCCc--cccccCChHHHHHHHHhh
Q psy359          336 LHFPLRPYACTQ--CDKTFKKKNHLTTHYRIHTGEKPYQCDI--CGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       336 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~  393 (405)
                      .....++|.|.+  |++.|.....|..|++.|.++++|+|.+  |++.|.....|..|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            356778999998  9999999999999999999999999976  999999999999998764

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.2e-11  Score=77.02  Aligned_cols=45  Identities=27%  Similarity=0.578  Sum_probs=42.8

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=9.6e-12  Score=77.56  Aligned_cols=45  Identities=22%  Similarity=0.416  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.2e-12  Score=77.88  Aligned_cols=45  Identities=24%  Similarity=0.564  Sum_probs=43.0

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.14  E-value=2.6e-12  Score=85.81  Aligned_cols=55  Identities=13%  Similarity=0.323  Sum_probs=49.4

Q ss_pred             HHhhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHH
Q psy359          330 LLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMK  387 (405)
Q Consensus       330 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  387 (405)
                      |..|+++|++++||.|++|++.|.....|.   +.|.++++|.|++|++.|....++.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            456889999999999999999999998886   8899999999999999999877654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.14  E-value=3.4e-11  Score=79.77  Aligned_cols=55  Identities=44%  Similarity=0.885  Sum_probs=51.0

Q ss_pred             CCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhhCC
Q psy359          187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSSHN  241 (405)
Q Consensus       187 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  241 (405)
                      ++|.|..|++.|.....|..|+++|+++++|.|..|++.|.+...|..|++..|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            4799999999999999999999999999999999999999999999999865454

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.3e-12  Score=78.41  Aligned_cols=45  Identities=24%  Similarity=0.518  Sum_probs=43.1

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.14  E-value=1.5e-11  Score=76.65  Aligned_cols=45  Identities=18%  Similarity=0.392  Sum_probs=42.7

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.3e-11  Score=76.88  Aligned_cols=45  Identities=24%  Similarity=0.524  Sum_probs=42.7

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.13  E-value=5.4e-11  Score=87.05  Aligned_cols=72  Identities=32%  Similarity=0.434  Sum_probs=56.4

Q ss_pred             ccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCch
Q psy359          277 KLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKN  356 (405)
Q Consensus       277 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  356 (405)
                      ...|.|..|++.|.+...|..|++..|.+..+.      +.+.                    -++|.|.+|++.|....
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~------~~~~--------------------c~~~~C~~C~k~f~~~~   76 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQ------NNHV--------------------CYWEECPREGKSFKAKY   76 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTC------SCCC--------------------CCCTTCSSTTCCCSSHH
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCC------Cccc--------------------eeccCCCCCCcccCCHH
Confidence            345789999999999999999988546543110      0000                    12389999999999999


Q ss_pred             hHHHHhhhhCCCCcccCC
Q psy359          357 HLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       357 ~l~~H~~~h~~~~~~~C~  374 (405)
                      .|..|++.|+++++|.|.
T Consensus        77 ~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           77 KLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             HHHHHHHHHHTCCCCSSC
T ss_pred             HHHHHHHhcCCCCCCCCC
Confidence            999999999999999996

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.1e-11  Score=75.95  Aligned_cols=45  Identities=24%  Similarity=0.484  Sum_probs=42.6

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999875

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.11  E-value=2.6e-11  Score=75.53  Aligned_cols=42  Identities=38%  Similarity=0.676  Sum_probs=23.7

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455555555555555555555555555555555555555554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.6e-11  Score=75.55  Aligned_cols=42  Identities=40%  Similarity=0.657  Sum_probs=26.4

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            555566666666666666666666666666666666666664

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.3e-11  Score=75.04  Aligned_cols=43  Identities=35%  Similarity=0.686  Sum_probs=28.3

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      +|+++|++++||.|.+|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3556666666666666666666666666666666666666665

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.11  E-value=2.9e-11  Score=73.66  Aligned_cols=40  Identities=33%  Similarity=0.640  Sum_probs=20.6

Q ss_pred             hhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          334 KRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       334 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      +++|+++++|+|.+|++.|.....|..|++.|.++++|.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            3444555555555555555555555555555555555554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=2.7e-11  Score=75.48  Aligned_cols=42  Identities=43%  Similarity=0.682  Sum_probs=22.5

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            444555555555555555555555555555555555555554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3e-11  Score=75.24  Aligned_cols=43  Identities=35%  Similarity=0.657  Sum_probs=28.8

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      +|+++|+++++|.|.+|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3556666666666666666666666666666666666666665

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.9e-11  Score=75.29  Aligned_cols=42  Identities=38%  Similarity=0.682  Sum_probs=25.8

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|+++++|+|.+|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            555566666666666666666666666666666666666654

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.8e-11  Score=73.72  Aligned_cols=40  Identities=25%  Similarity=0.483  Sum_probs=22.3

Q ss_pred             hhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccc
Q psy359          362 YRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAV  401 (405)
Q Consensus       362 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  401 (405)
                      ++.|.++++|.|.+|++.|.+...|..|+++|++++||.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4445555555555555555555555555555555555555

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.2e-11  Score=76.26  Aligned_cols=45  Identities=27%  Similarity=0.488  Sum_probs=42.8

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHH-hhccccccccccC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRR-TVHKAQIHAVEDK  404 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~~~~~~~~  404 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|++ +|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            47889999999999999999999999999999 9999999999987

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.11  E-value=2e-11  Score=74.38  Aligned_cols=42  Identities=26%  Similarity=0.548  Sum_probs=40.0

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      |++.|.++++|.|++|++.|.+...|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            678899999999999999999999999999999999999985

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.9e-11  Score=75.33  Aligned_cols=42  Identities=31%  Similarity=0.619  Sum_probs=24.6

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            455555555566666666665555555555555555555554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.9e-11  Score=75.28  Aligned_cols=42  Identities=38%  Similarity=0.674  Sum_probs=23.0

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.5e-11  Score=74.96  Aligned_cols=42  Identities=40%  Similarity=0.702  Sum_probs=25.7

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|+++++|.|.+|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555566666666666666666666666666666666666654

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.4e-11  Score=75.01  Aligned_cols=43  Identities=33%  Similarity=0.622  Sum_probs=28.6

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      .|+++|+++++|.|.+|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3556666666666666666666666666666666666666665

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4e-11  Score=73.02  Aligned_cols=42  Identities=26%  Similarity=0.508  Sum_probs=39.9

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|+|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            677899999999999999999999999999999999999995

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.3e-11  Score=75.07  Aligned_cols=42  Identities=38%  Similarity=0.687  Sum_probs=25.6

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|+++++|+|.+|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            555566666666666666666666666666666666666654

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.3e-11  Score=75.08  Aligned_cols=43  Identities=40%  Similarity=0.619  Sum_probs=29.4

Q ss_pred             hhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          334 KRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       334 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      +++|+++++|+|.+|++.|.....|..|++.|.++++|.|.+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4456666677777777777777777777777776677777665

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.7e-11  Score=74.81  Aligned_cols=42  Identities=38%  Similarity=0.630  Sum_probs=24.8

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|+++++|+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            455555556666666666666666666665555555555554

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.7e-11  Score=74.80  Aligned_cols=44  Identities=41%  Similarity=0.695  Sum_probs=29.9

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI  375 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  375 (405)
                      +|+++|+++++|+|.+|++.|.....|..|++.|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            35666667777777777777777777777777777677776653

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4e-11  Score=74.65  Aligned_cols=42  Identities=38%  Similarity=0.652  Sum_probs=25.6

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555566666666666666666666666666666666666654

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.2e-11  Score=74.57  Aligned_cols=42  Identities=38%  Similarity=0.623  Sum_probs=22.9

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|+++++|+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444555555555555555555555555555555555555554

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.8e-11  Score=74.76  Aligned_cols=42  Identities=40%  Similarity=0.687  Sum_probs=27.0

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|+++++|+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666666666666666666666666666666666666665

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=4.1e-11  Score=73.83  Aligned_cols=41  Identities=24%  Similarity=0.497  Sum_probs=24.2

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            45555555666666666666666666666555555555555

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=5.2e-11  Score=73.73  Aligned_cols=41  Identities=32%  Similarity=0.644  Sum_probs=23.2

Q ss_pred             hCCCCcccCCccccccCChHHHHHHHHhhccccccccccCC
Q psy359          365 HTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDKG  405 (405)
Q Consensus       365 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~  405 (405)
                      |.++++|.|.+|++.|.....|..|+++|+++++|.|+.||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            44555555555555555555555555555555555555554

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.7e-11  Score=74.81  Aligned_cols=42  Identities=36%  Similarity=0.664  Sum_probs=23.1

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.09  E-value=2.8e-11  Score=83.78  Aligned_cols=60  Identities=32%  Similarity=0.731  Sum_probs=55.5

Q ss_pred             HhhccCCCCccCc--cchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhh
Q psy359          180 NEVHAHERKFPCT--FCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSS  239 (405)
Q Consensus       180 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  239 (405)
                      ...+.++++|.|.  .|++.|.....|..|+++|.++++|.|..|++.|.+...|..|++.|
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            4567788999997  59999999999999999999999999999999999999999999874

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.09  E-value=2.2e-11  Score=78.75  Aligned_cols=52  Identities=23%  Similarity=0.278  Sum_probs=45.9

Q ss_pred             cccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccc
Q psy359          349 DKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHA  400 (405)
Q Consensus       349 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  400 (405)
                      ++.|.....|..|++.|.++++|.|.+|++.|.+...|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4678888888999999999999999999999999999999999999988874

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.9e-11  Score=74.73  Aligned_cols=42  Identities=43%  Similarity=0.707  Sum_probs=27.0

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|+++++|+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555666666666666666666666666666666666666665

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=3.8e-11  Score=74.75  Aligned_cols=44  Identities=25%  Similarity=0.519  Sum_probs=41.8

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|+|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.5e-11  Score=74.94  Aligned_cols=42  Identities=29%  Similarity=0.621  Sum_probs=21.3

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      |++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            444444455555555555555555555555555555555554

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.2e-11  Score=74.58  Aligned_cols=42  Identities=24%  Similarity=0.515  Sum_probs=20.8

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      |++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444444555555555555555555555555555555543

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4e-11  Score=74.65  Aligned_cols=44  Identities=27%  Similarity=0.598  Sum_probs=41.7

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.8e-11  Score=74.31  Aligned_cols=43  Identities=35%  Similarity=0.622  Sum_probs=41.1

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      .|+++|++++||+|.+|++.|.....|..|++.|.++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999999999997

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.07  E-value=4.3e-11  Score=74.51  Aligned_cols=44  Identities=27%  Similarity=0.553  Sum_probs=41.8

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.5e-11  Score=74.43  Aligned_cols=42  Identities=26%  Similarity=0.566  Sum_probs=20.8

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      |++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            344444444555555555555555555555555555555543

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.2e-11  Score=74.55  Aligned_cols=42  Identities=31%  Similarity=0.510  Sum_probs=22.2

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555555554

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=5.6e-11  Score=73.59  Aligned_cols=43  Identities=28%  Similarity=0.509  Sum_probs=40.8

Q ss_pred             hhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCccc
Q psy359          335 RLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICG  377 (405)
Q Consensus       335 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  377 (405)
                      .+|++++||+|.+|++.|.....|..|++.|.++++|.|++|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            3588999999999999999999999999999999999999996

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.3e-11  Score=74.53  Aligned_cols=44  Identities=27%  Similarity=0.538  Sum_probs=41.7

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.6e-11  Score=73.58  Aligned_cols=41  Identities=34%  Similarity=0.638  Sum_probs=24.6

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      |+++|+++++|.|.+|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            55555566666666666666666666666666666666555

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5.3e-11  Score=74.09  Aligned_cols=42  Identities=31%  Similarity=0.633  Sum_probs=26.6

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            455566666666666666666666666666666666666665

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.4e-11  Score=75.01  Aligned_cols=44  Identities=25%  Similarity=0.499  Sum_probs=41.8

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|+|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5.1e-11  Score=73.39  Aligned_cols=41  Identities=34%  Similarity=0.617  Sum_probs=21.5

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      |+++|+++++|+|.+|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            44445555555555555555555555555555555555554

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.2e-11  Score=74.59  Aligned_cols=44  Identities=30%  Similarity=0.571  Sum_probs=41.7

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|++|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.2e-11  Score=73.79  Aligned_cols=41  Identities=27%  Similarity=0.581  Sum_probs=25.6

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            55556666666666666666666666666666666666665

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.8e-11  Score=74.32  Aligned_cols=43  Identities=30%  Similarity=0.543  Sum_probs=41.7

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            5899999999999999999999999999999999999999997

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.1e-11  Score=73.00  Aligned_cols=41  Identities=37%  Similarity=0.656  Sum_probs=28.1

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            55666666777777777777777777777766766666665

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=6.8e-11  Score=74.33  Aligned_cols=42  Identities=33%  Similarity=0.570  Sum_probs=35.9

Q ss_pred             cCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcccc
Q psy359          337 HFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGR  378 (405)
Q Consensus       337 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  378 (405)
                      +.++++|.|.+|++.|.....|..|++.|.++++|.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            567788888888888888888888888888888888888875

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5e-11  Score=74.20  Aligned_cols=44  Identities=36%  Similarity=0.622  Sum_probs=42.2

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI  375 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  375 (405)
                      .|+++|+++++|+|.+|++.|.....|..|++.|.+++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999975

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.3e-11  Score=74.52  Aligned_cols=44  Identities=25%  Similarity=0.508  Sum_probs=41.8

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=6.2e-11  Score=72.98  Aligned_cols=43  Identities=21%  Similarity=0.471  Sum_probs=30.1

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      +|+++|++++||.|.+|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            3666677777777777777777777777777777777777663

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.1e-11  Score=74.64  Aligned_cols=42  Identities=33%  Similarity=0.543  Sum_probs=23.6

Q ss_pred             hhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          335 RLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       335 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      ++|+++++|.|.+|++.|.....|..|++.|.++++|.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345555555555555555555555555555555555555554

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.4e-11  Score=74.45  Aligned_cols=44  Identities=30%  Similarity=0.653  Sum_probs=41.7

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.5e-11  Score=74.43  Aligned_cols=44  Identities=27%  Similarity=0.594  Sum_probs=41.7

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.2e-11  Score=73.35  Aligned_cols=43  Identities=28%  Similarity=0.515  Sum_probs=40.8

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      .|++.|.++++|.|++|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999999999985

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.4e-11  Score=74.05  Aligned_cols=44  Identities=27%  Similarity=0.554  Sum_probs=41.7

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.1e-11  Score=74.19  Aligned_cols=44  Identities=25%  Similarity=0.497  Sum_probs=41.6

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.7e-11  Score=74.35  Aligned_cols=44  Identities=30%  Similarity=0.618  Sum_probs=41.7

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.4e-11  Score=74.04  Aligned_cols=44  Identities=30%  Similarity=0.590  Sum_probs=41.6

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.1e-11  Score=74.16  Aligned_cols=44  Identities=30%  Similarity=0.581  Sum_probs=41.6

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=7e-11  Score=71.93  Aligned_cols=41  Identities=32%  Similarity=0.597  Sum_probs=26.8

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45556666666666666666666666666666666666665

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5e-11  Score=73.42  Aligned_cols=43  Identities=28%  Similarity=0.445  Sum_probs=40.8

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4788999999999999999999999999999999999999985

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=5.8e-11  Score=73.11  Aligned_cols=43  Identities=28%  Similarity=0.492  Sum_probs=40.8

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4788999999999999999999999999999999999999985

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.9e-11  Score=73.28  Aligned_cols=44  Identities=20%  Similarity=0.412  Sum_probs=41.6

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47888999999999999999999999999999999999999974

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=7.2e-11  Score=73.47  Aligned_cols=42  Identities=31%  Similarity=0.428  Sum_probs=27.4

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCC-CCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTG-EKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~  374 (405)
                      |+++|++++||.|.+|++.|.....|..|++.|.+ +++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55566666666666666666666666666666666 6666664

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.8e-11  Score=74.28  Aligned_cols=42  Identities=24%  Similarity=0.611  Sum_probs=23.1

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      |++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555555554

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7.6e-11  Score=73.38  Aligned_cols=43  Identities=30%  Similarity=0.531  Sum_probs=40.9

Q ss_pred             hhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          362 YRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       362 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      ++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4678999999999999999999999999999999999999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.7e-11  Score=73.63  Aligned_cols=42  Identities=40%  Similarity=0.664  Sum_probs=26.5

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555566666666666666666666666666666666666664

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6e-11  Score=73.86  Aligned_cols=44  Identities=20%  Similarity=0.452  Sum_probs=41.6

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.2e-11  Score=74.14  Aligned_cols=44  Identities=27%  Similarity=0.574  Sum_probs=41.4

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.1e-10  Score=72.70  Aligned_cols=42  Identities=36%  Similarity=0.642  Sum_probs=27.4

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++|+++++|+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.6e-11  Score=73.57  Aligned_cols=43  Identities=26%  Similarity=0.502  Sum_probs=40.9

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4788999999999999999999999999999999999999985

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.8e-11  Score=73.13  Aligned_cols=41  Identities=29%  Similarity=0.505  Sum_probs=26.2

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            55566666666666666666666666666666666666665

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.3e-11  Score=74.11  Aligned_cols=44  Identities=32%  Similarity=0.619  Sum_probs=41.6

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            47889999999999999999999999999999999999999975

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.1e-11  Score=72.19  Aligned_cols=41  Identities=32%  Similarity=0.546  Sum_probs=21.7

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            34445555555555555555555555555555555555544

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.5e-11  Score=73.68  Aligned_cols=44  Identities=25%  Similarity=0.536  Sum_probs=41.6

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.5e-11  Score=74.00  Aligned_cols=42  Identities=33%  Similarity=0.536  Sum_probs=20.9

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      |++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444445555555555555555555555555555555543

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=8.3e-11  Score=73.19  Aligned_cols=44  Identities=30%  Similarity=0.561  Sum_probs=42.1

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI  375 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  375 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999974

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=3.7e-12  Score=88.28  Aligned_cols=59  Identities=20%  Similarity=0.307  Sum_probs=51.4

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccccCc
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKK  355 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  355 (405)
                      ++++|.|.+|++.|.+...|..                                          +++|.|.+|++.|...
T Consensus        15 ~~~~~~C~~C~k~f~~~~~l~~------------------------------------------~~~~~C~~C~~~f~~~   52 (73)
T 2ctu_A           15 GDRSQKCSKCGIIFIRRSTLSR------------------------------------------RKTPMCEKCRKDSCQE   52 (73)
T ss_dssp             CCSEEECSSSCCEEECCCCCCC------------------------------------------SSSCCCHHHHHTCSCC
T ss_pred             CCCCeeCCcccchhCCHHHhCc------------------------------------------CCCCCCCCCChhhcCH
Confidence            5678999999999977654332                                          4679999999999999


Q ss_pred             hhHHHHhhhhCCCCcccCCcc
Q psy359          356 NHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       356 ~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      ..|..|++.|+++++|.|++|
T Consensus        53 ~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           53 AALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHHHHhhcCCCCCCCCCC
Confidence            999999999999999999988

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.3e-11  Score=73.74  Aligned_cols=44  Identities=32%  Similarity=0.619  Sum_probs=41.6

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.03  E-value=9.8e-11  Score=71.25  Aligned_cols=40  Identities=28%  Similarity=0.468  Sum_probs=20.1

Q ss_pred             hhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          334 KRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       334 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      +++|++++||+|.+|++.|.....|..|++.|.++++|.|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3444455555555555555555555555555555555444

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7e-11  Score=73.55  Aligned_cols=44  Identities=27%  Similarity=0.536  Sum_probs=41.3

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccC
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      +++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            35678999999999999999999999999999999999999987

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.02  E-value=8.6e-11  Score=71.52  Aligned_cols=41  Identities=27%  Similarity=0.575  Sum_probs=39.3

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccc
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAV  401 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  401 (405)
                      |++.|.++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            67889999999999999999999999999999999999987

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.6e-11  Score=72.04  Aligned_cols=41  Identities=27%  Similarity=0.498  Sum_probs=39.4

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccc
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAV  401 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  401 (405)
                      |++.|.++++|.|..|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            67889999999999999999999999999999999999987

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=6.3e-11  Score=72.15  Aligned_cols=41  Identities=32%  Similarity=0.565  Sum_probs=39.3

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccc
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAV  401 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  401 (405)
                      |++.|.++++|+|.+|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            67889999999999999999999999999999999999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.2e-11  Score=73.22  Aligned_cols=43  Identities=21%  Similarity=0.371  Sum_probs=41.5

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      +|+++|++++||+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5899999999999999999999999999999999999999996

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.8e-11  Score=73.59  Aligned_cols=44  Identities=25%  Similarity=0.542  Sum_probs=41.6

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.3e-10  Score=71.55  Aligned_cols=41  Identities=22%  Similarity=0.391  Sum_probs=21.9

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      |+++|+++++|.|.+|++.|.....|..|++.|.++++|+|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            44445555555555555555555555555555555555554

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.3e-11  Score=73.18  Aligned_cols=44  Identities=27%  Similarity=0.611  Sum_probs=41.2

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999974

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.8e-11  Score=72.65  Aligned_cols=41  Identities=32%  Similarity=0.574  Sum_probs=39.5

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccc
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAV  401 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  401 (405)
                      |++.|.++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            78889999999999999999999999999999999999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=7.8e-11  Score=73.33  Aligned_cols=44  Identities=18%  Similarity=0.351  Sum_probs=41.4

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhcc-cccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHK-AQIHAVED  403 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~-~~~~~~~~  403 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++ ++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999 99999974

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.8e-11  Score=84.89  Aligned_cols=66  Identities=26%  Similarity=0.451  Sum_probs=60.0

Q ss_pred             HHHhhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccc
Q psy359          329 QLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       329 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      .|..|++++.+++||.|.+|++.|. ...|..|+ .|.++++|.|+.|++.|. ...|..|+.++.++.
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            4678999999999999999999995 99999999 899999999999999987 599999999977764

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.5e-10  Score=71.19  Aligned_cols=41  Identities=29%  Similarity=0.459  Sum_probs=26.0

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      |+++|++++||+|.+|++.|.....|..|++.|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            55566666666666666666666666666666666666655

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=8.1e-11  Score=72.46  Aligned_cols=43  Identities=16%  Similarity=0.271  Sum_probs=40.8

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4788999999999999999999999999999999999999985

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.4e-10  Score=71.32  Aligned_cols=42  Identities=14%  Similarity=0.199  Sum_probs=40.0

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      |++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            678899999999999999999999999999999999999985

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.1e-11  Score=73.01  Aligned_cols=43  Identities=19%  Similarity=0.426  Sum_probs=40.7

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999999999984

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2e-10  Score=72.11  Aligned_cols=44  Identities=30%  Similarity=0.499  Sum_probs=32.5

Q ss_pred             hhhhcCCCCccccc--cccccccCchhHHHHhhhhCCCCcccCCcc
Q psy359          333 HKRLHFPLRPYACT--QCDKTFKKKNHLTTHYRIHTGEKPYQCDIC  376 (405)
Q Consensus       333 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  376 (405)
                      |.++|+++++|+|.  .|++.|.....|..|++.|.++++|+|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45567777777776  677777777777777777777777777766

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.2e-10  Score=76.64  Aligned_cols=58  Identities=22%  Similarity=0.343  Sum_probs=50.6

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccchHHHHhhhhhcCCCCccccc-cccccccC
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACT-QCDKTFKK  354 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~  354 (405)
                      +.++|.|..|++.|. .+.|..|++.                                    ++++||+|+ .|++.|..
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~------------------------------------~~~~p~~C~~~C~k~f~~   49 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ------------------------------------CPRLPVACPNQCGVGTVA   49 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH------------------------------------CSSSEEECTTCCSCCEEE
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH------------------------------------cCCcCccCCcccCccccc
Confidence            567899999999999 9888888763                                    457889999 99999999


Q ss_pred             chhHHHHhhhhCCCCc
Q psy359          355 KNHLTTHYRIHTGEKP  370 (405)
Q Consensus       355 ~~~l~~H~~~h~~~~~  370 (405)
                      ...|..|+++|...++
T Consensus        50 ~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           50 REDLPGHLKDSCNTAL   65 (66)
T ss_dssp             TTTHHHHHHTTSSSCC
T ss_pred             HHHHHHHHHhhcccCc
Confidence            9999999999887654

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.9e-10  Score=70.68  Aligned_cols=40  Identities=35%  Similarity=0.542  Sum_probs=20.2

Q ss_pred             hhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          335 RLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       335 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      ++|+++++|+|.+|++.|.....|..|++.|.++++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            3344455555555555555555555555555555555543

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.1e-10  Score=70.91  Aligned_cols=41  Identities=41%  Similarity=0.724  Sum_probs=26.9

Q ss_pred             hhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          334 KRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       334 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      .++|+++++|+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            34566666666666666666666666666666666666665

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=70.70  Aligned_cols=43  Identities=28%  Similarity=0.477  Sum_probs=40.5

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVE  402 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  402 (405)
                      .|++.|.++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            4788999999999999999999999999999999999999874

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.95  E-value=3.7e-10  Score=69.05  Aligned_cols=38  Identities=18%  Similarity=0.324  Sum_probs=18.7

Q ss_pred             cCCCCccccccccccccCchhHHHHhhhhCCCCcccCC
Q psy359          337 HFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCD  374 (405)
Q Consensus       337 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  374 (405)
                      |+++++|+|.+|++.|.....|..|++.|.++++|.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            44444455555555555555555554444444444443

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.95  E-value=2.7e-10  Score=71.52  Aligned_cols=42  Identities=17%  Similarity=0.352  Sum_probs=39.7

Q ss_pred             hhCCCCcccCCccccccCChHHHHHHHHhhccccccccccCC
Q psy359          364 IHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDKG  405 (405)
Q Consensus       364 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~  405 (405)
                      .|.++++|.|.+|++.|.+...|..|+++|++++||.|+.||
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            367789999999999999999999999999999999999997

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.93  E-value=6.4e-10  Score=67.95  Aligned_cols=41  Identities=17%  Similarity=0.419  Sum_probs=38.4

Q ss_pred             hhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       363 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      +.|.++++|.|..|++.|.+...|..|+++|++++||.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            45889999999999999999999999999999999999974

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=6.1e-10  Score=69.16  Aligned_cols=42  Identities=24%  Similarity=0.397  Sum_probs=39.5

Q ss_pred             hhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          362 YRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       362 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      ++.|.++++|.|.+|++.|.+...|..|+++|++++||.|..
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            567899999999999999999999999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=6.1e-10  Score=67.22  Aligned_cols=38  Identities=42%  Similarity=0.698  Sum_probs=23.7

Q ss_pred             hcCCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          336 LHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       336 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      +|++++||+|.+|++.|.....|..|++.|.+++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            45556666666666666666666666666666666655

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3e-10  Score=70.23  Aligned_cols=43  Identities=23%  Similarity=0.524  Sum_probs=39.6

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccccccc
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVED  403 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  403 (405)
                      +.+.|.++++|+|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3467889999999999999999999999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=6.7e-10  Score=67.05  Aligned_cols=39  Identities=23%  Similarity=0.508  Sum_probs=37.0

Q ss_pred             hhhCCCCcccCCccccccCChHHHHHHHHhhcccccccc
Q psy359          363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAV  401 (405)
Q Consensus       363 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  401 (405)
                      +.|.++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            468899999999999999999999999999999999987

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.8e-10  Score=69.94  Aligned_cols=44  Identities=30%  Similarity=0.579  Sum_probs=41.2

Q ss_pred             HhhhhCCCCcccCC--ccccccCChHHHHHHHHhhccccccccccC
Q psy359          361 HYRIHTGEKPYQCD--ICGRGFAQSNDMKKHRRTVHKAQIHAVEDK  404 (405)
Q Consensus       361 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~  404 (405)
                      |.+.|.++++|+|.  .|++.|.....|..|+++|++++||.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678999999998  899999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.85  E-value=1.1e-09  Score=70.56  Aligned_cols=47  Identities=28%  Similarity=0.503  Sum_probs=43.2

Q ss_pred             hccCCCCccCccchhccCChHHHHHHHh-hhcCCCCcccccchHhhhC
Q psy359          182 VHAHERKFPCTFCEKSFKRKLHLKVHTR-THTGEKPYACYLCDKRFAQ  228 (405)
Q Consensus       182 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  228 (405)
                      .+.++++|.|.+|++.|.....|..|++ +|.++++|+|..|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4567889999999999999999999987 8999999999999999975

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.85  E-value=1.6e-09  Score=74.60  Aligned_cols=55  Identities=42%  Similarity=0.885  Sum_probs=50.9

Q ss_pred             cCCCCccCcc--chhccCChHHHHHHHhhhcCCCCccccc--chHhhhChHHHHHHHhh
Q psy359          184 AHERKFPCTF--CEKSFKRKLHLKVHTRTHTGEKPYACYL--CDKRFAQISDRIKHLKS  238 (405)
Q Consensus       184 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~  238 (405)
                      ...++|.|..  |++.|.....|..|+++|.++++|+|.+  |++.|.....|..|++.
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            4567899998  9999999999999999999999999975  99999999999999875

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.81  E-value=8.1e-10  Score=71.24  Aligned_cols=44  Identities=16%  Similarity=0.274  Sum_probs=40.4

Q ss_pred             HHHhhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCccc
Q psy359          329 QLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQ  372 (405)
Q Consensus       329 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  372 (405)
                      .|..|+++|+++++|.|.+|++.|.....|..|++.|++++||.
T Consensus        11 ~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A           11 GTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             chhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            46678888999999999999999999999999999999999874

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.77  E-value=4.3e-10  Score=74.83  Aligned_cols=45  Identities=13%  Similarity=0.180  Sum_probs=41.4

Q ss_pred             HHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccCC
Q psy359          358 LTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDKG  405 (405)
Q Consensus       358 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~  405 (405)
                      |..|++.|.++++|.|+.|++.|.+...|.   +.|.+++||.|+.||
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~   46 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCH   46 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCC
Confidence            456889999999999999999999999887   889999999999997

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.73  E-value=6.6e-09  Score=61.77  Aligned_cols=36  Identities=17%  Similarity=0.418  Sum_probs=22.4

Q ss_pred             CCCCcccCCccccccCChHHHHHHHHhhcccccccc
Q psy359          366 TGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAV  401 (405)
Q Consensus       366 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  401 (405)
                      .++++|.|.+|++.|.+...|..|+++|++++||.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            455666666666666666666666666666666654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=6.5e-09  Score=60.94  Aligned_cols=35  Identities=23%  Similarity=0.551  Sum_probs=22.0

Q ss_pred             hhCCCCcccCCccccccCChHHHHHHHHhhccccc
Q psy359          364 IHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQI  398 (405)
Q Consensus       364 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  398 (405)
                      .|.++++|.|..|++.|.+...|..|+++|++++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            45566666666666666666666666666666543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.69  E-value=8.2e-09  Score=60.51  Aligned_cols=35  Identities=29%  Similarity=0.705  Sum_probs=18.2

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhCC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  367 (405)
                      |+++|++++||+|++|++.|.....|..|++.|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            44445555555555555555555555555555443

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.68  E-value=9.4e-09  Score=61.07  Aligned_cols=37  Identities=24%  Similarity=0.647  Sum_probs=34.1

Q ss_pred             cCCCCccccccccccccCchhHHHHhhhhCCCCcccC
Q psy359          337 HFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQC  373 (405)
Q Consensus       337 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  373 (405)
                      |++++||+|.+|++.|.....|..|++.|.++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4678999999999999999999999999999999876

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.67  E-value=7.7e-09  Score=60.64  Aligned_cols=36  Identities=36%  Similarity=0.641  Sum_probs=33.7

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      |++.|.++++|+|+.|++.|.+...|..|++.|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            778899999999999999999999999999998874

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.64  E-value=1.6e-08  Score=58.30  Aligned_cols=34  Identities=32%  Similarity=0.632  Sum_probs=22.4

Q ss_pred             hCCCCcccCCccccccCChHHHHHHHHhhccccc
Q psy359          365 HTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQI  398 (405)
Q Consensus       365 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  398 (405)
                      |.++++|.|.+|++.|.+...|..|++.|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            4556666666666666666667677666666553

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.2e-08  Score=59.78  Aligned_cols=36  Identities=22%  Similarity=0.492  Sum_probs=33.3

Q ss_pred             hhcCCCCccccccccccccCchhHHHHhhhhCCCCc
Q psy359          335 RLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKP  370 (405)
Q Consensus       335 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  370 (405)
                      ++|++++||+|.+|++.|.....|..|++.|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            468899999999999999999999999999998864

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=2e-09  Score=76.83  Aligned_cols=60  Identities=18%  Similarity=0.349  Sum_probs=49.9

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcc
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      .|.++|++++||+|.+|++.|.....|..|++.|.+++||+|..|.+    ...|..|.+.|.+
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccccc
Confidence            34567899999999999999999999999999999999999987764    4555556666665

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=3e-08  Score=65.20  Aligned_cols=38  Identities=32%  Similarity=0.689  Sum_probs=19.9

Q ss_pred             cCCCCcccccc--ccccccCchhHHHHh-hhhCCCCcccCC
Q psy359          337 HFPLRPYACTQ--CDKTFKKKNHLTTHY-RIHTGEKPYQCD  374 (405)
Q Consensus       337 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~  374 (405)
                      .++++||+|..  |+++|...+.|..|+ ++|++++||.|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            34555555543  555555555555554 345555555543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=2.8e-08  Score=65.36  Aligned_cols=40  Identities=15%  Similarity=0.246  Sum_probs=35.9

Q ss_pred             hCCCCcccCCc--cccccCChHHHHHHH-HhhccccccccccC
Q psy359          365 HTGEKPYQCDI--CGRGFAQSNDMKKHR-RTVHKAQIHAVEDK  404 (405)
Q Consensus       365 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~~h~~~~~~~~~~  404 (405)
                      ..+++||+|..  |++.|.+..+|+.|+ ++|.+++||.|-+-
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence            57899999975  999999999999998 68999999999763

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.56  E-value=3.3e-08  Score=56.96  Aligned_cols=35  Identities=26%  Similarity=0.343  Sum_probs=32.0

Q ss_pred             hcCCCCccccccccccccCchhHHHHhhhhCCCCc
Q psy359          336 LHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKP  370 (405)
Q Consensus       336 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  370 (405)
                      +|+++++|.|.+|++.|.....|..|++.|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            36788999999999999999999999999998764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.56  E-value=3.2e-08  Score=57.03  Aligned_cols=33  Identities=21%  Similarity=0.609  Sum_probs=18.8

Q ss_pred             hCCCCcccCCccccccCChHHHHHHHHhhcccc
Q psy359          365 HTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       365 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      |.++++|.|.+|++.|.+...|..|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            445555555555555555555666655555544

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.53  E-value=4.5e-08  Score=56.42  Aligned_cols=35  Identities=26%  Similarity=0.504  Sum_probs=32.1

Q ss_pred             hcCCCCccccccccccccCchhHHHHhhhhCCCCc
Q psy359          336 LHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKP  370 (405)
Q Consensus       336 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  370 (405)
                      +|++++||.|.+|++.|.....|..|++.|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            36789999999999999999999999999998764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.53  E-value=6.1e-08  Score=55.06  Aligned_cols=31  Identities=19%  Similarity=0.388  Sum_probs=20.0

Q ss_pred             cccCCccccccCChHHHHHHHHhhccccccc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHKAQIHA  400 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  400 (405)
                      ||.|..|++.|.+...|..|+++|++++||.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5666666666666666666666666666653

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.50  E-value=6.2e-08  Score=55.03  Aligned_cols=32  Identities=28%  Similarity=0.607  Sum_probs=30.1

Q ss_pred             CccccccccccccCchhHHHHhhhhCCCCccc
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQ  372 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  372 (405)
                      +||.|.+|++.|...+.|..|++.|.++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            57999999999999999999999999999885

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.48  E-value=2.6e-08  Score=71.00  Aligned_cols=46  Identities=11%  Similarity=0.236  Sum_probs=41.6

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccCC
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDKG  405 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~  405 (405)
                      .|.+.|.++++|.|..|++.|.+...|..|+++|++++||.|..|.
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~   60 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE   60 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh
Confidence            3456789999999999999999999999999999999999998763

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=9.9e-08  Score=55.84  Aligned_cols=32  Identities=9%  Similarity=0.230  Sum_probs=17.8

Q ss_pred             hCCCCcccCCc--cccccCChHHHHHHHHhhccc
Q psy359          365 HTGEKPYQCDI--CGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       365 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      +++++||+|+.  |++.|.+...|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34555555554  555555555555555555543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.47  E-value=7e-08  Score=55.59  Aligned_cols=25  Identities=20%  Similarity=0.557  Sum_probs=16.0

Q ss_pred             CCCCcccCCccccccCChHHHHHHH
Q psy359          366 TGEKPYQCDICGRGFAQSNDMKKHR  390 (405)
Q Consensus       366 ~~~~~~~C~~C~~~f~~~~~l~~H~  390 (405)
                      .+++||+|..|++.|.+.++|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4566666666666666666666665

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.47  E-value=9.5e-08  Score=56.18  Aligned_cols=35  Identities=20%  Similarity=0.552  Sum_probs=24.1

Q ss_pred             hCCCCcccCC--ccccccCChHHHHHHHHhhcccccc
Q psy359          365 HTGEKPYQCD--ICGRGFAQSNDMKKHRRTVHKAQIH  399 (405)
Q Consensus       365 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~  399 (405)
                      |.++++|.|.  .|++.|.+...|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            3556677777  4777777777777777777777665

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=1e-07  Score=55.77  Aligned_cols=33  Identities=24%  Similarity=0.376  Sum_probs=30.1

Q ss_pred             cCCCCcccccc--ccccccCchhHHHHhhhhCCCC
Q psy359          337 HFPLRPYACTQ--CDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       337 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      +++++||+|+.  |+++|...+.|..|+++|+++.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            57899999986  9999999999999999999863

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1.2e-07  Score=55.30  Aligned_cols=33  Identities=15%  Similarity=0.385  Sum_probs=19.2

Q ss_pred             hhCCCCcccCCccccccCCh-HHHHHHHHhhccc
Q psy359          364 IHTGEKPYQCDICGRGFAQS-NDMKKHRRTVHKA  396 (405)
Q Consensus       364 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~~h~~  396 (405)
                      .|.++++|.|+.|++.|.+. ..|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            34555566666666666665 6666666655544

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1.5e-07  Score=54.50  Aligned_cols=32  Identities=25%  Similarity=0.481  Sum_probs=18.9

Q ss_pred             hCCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          365 HTGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       365 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      |.++++|.|.+|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            45555666666666666666666666655544

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=8.1e-08  Score=56.15  Aligned_cols=32  Identities=19%  Similarity=0.321  Sum_probs=17.3

Q ss_pred             hhCCCCcccCCccccccCChHHHHHH-HHhhcc
Q psy359          364 IHTGEKPYQCDICGRGFAQSNDMKKH-RRTVHK  395 (405)
Q Consensus       364 ~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~  395 (405)
                      .|.+++||+|..|++.|.+...|..| ++.|.+
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            44555555555555555555555555 444443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.3e-07  Score=54.81  Aligned_cols=32  Identities=19%  Similarity=0.519  Sum_probs=18.9

Q ss_pred             hCCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          365 HTGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       365 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      |.++++|+|.+|++.|.+...|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            45555666666666666666666666655543

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.1e-07  Score=55.59  Aligned_cols=35  Identities=31%  Similarity=0.441  Sum_probs=31.7

Q ss_pred             hhcCCCCccccccccccccCc-hhHHHHhhhhCCCC
Q psy359          335 RLHFPLRPYACTQCDKTFKKK-NHLTTHYRIHTGEK  369 (405)
Q Consensus       335 ~~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  369 (405)
                      ++|++++||+|.+|++.|... ..|..|++.|.+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            357899999999999999999 99999999998764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.2e-07  Score=55.03  Aligned_cols=31  Identities=23%  Similarity=0.431  Sum_probs=15.6

Q ss_pred             cCCCCccccccccccccCchhHHHHhhhhCC
Q psy359          337 HFPLRPYACTQCDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       337 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  367 (405)
                      |++++||+|.+|++.|.....|..|++.|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            3444555555555555555555555555444

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.5e-07  Score=54.49  Aligned_cols=34  Identities=41%  Similarity=0.647  Sum_probs=31.3

Q ss_pred             hcCCCCccccccccccccCchhHHHHhhhhCCCC
Q psy359          336 LHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       336 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      +|++++||+|.+|++.|.....|..|++.|.+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4788999999999999999999999999998764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=9.3e-08  Score=55.88  Aligned_cols=34  Identities=26%  Similarity=0.345  Sum_probs=31.1

Q ss_pred             hhcCCCCccccccccccccCchhHHHH-hhhhCCC
Q psy359          335 RLHFPLRPYACTQCDKTFKKKNHLTTH-YRIHTGE  368 (405)
Q Consensus       335 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  368 (405)
                      ++|++++||+|..|++.|.....|..| ++.|.++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            468899999999999999999999999 8888764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=2.2e-07  Score=53.73  Aligned_cols=32  Identities=25%  Similarity=0.555  Sum_probs=19.3

Q ss_pred             hCCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          365 HTGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       365 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      |.++++|.|.+|++.|.+...|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            44556666666666666666666666665554

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.4e-07  Score=54.64  Aligned_cols=34  Identities=26%  Similarity=0.553  Sum_probs=31.2

Q ss_pred             hcCCCCccccccccccccCchhHHHHhhhhCCCC
Q psy359          336 LHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       336 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      .|++++||+|.+|++.|.....|..|++.|.+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4788999999999999999999999999998764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.39  E-value=1.1e-07  Score=54.83  Aligned_cols=32  Identities=22%  Similarity=0.546  Sum_probs=28.9

Q ss_pred             cCCCCccccccccccccCchhHHHHhhhhCCCCcccCCc
Q psy359          337 HFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDI  375 (405)
Q Consensus       337 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  375 (405)
                      +.+++||+|+.|+++|...+.|..|+       ||.|+.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            46889999999999999999999998       788864

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=1.3e-07  Score=54.80  Aligned_cols=34  Identities=24%  Similarity=0.386  Sum_probs=31.0

Q ss_pred             hhCCCCcccCCccccccCChHHHHHHHHhhcccc
Q psy359          364 IHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       364 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      .|.++++|.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            5788999999999999999999999999988763

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.36  E-value=1.6e-07  Score=55.17  Aligned_cols=35  Identities=26%  Similarity=0.575  Sum_probs=32.3

Q ss_pred             cCCCCccccc--cccccccCchhHHHHhhhhCCCCcc
Q psy359          337 HFPLRPYACT--QCDKTFKKKNHLTTHYRIHTGEKPY  371 (405)
Q Consensus       337 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  371 (405)
                      |++++||+|.  .|++.|.....|..|++.|.++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4678999999  5999999999999999999999887

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=2.6e-07  Score=53.45  Aligned_cols=34  Identities=29%  Similarity=0.479  Sum_probs=31.2

Q ss_pred             hcCCCCccccccccccccCchhHHHHhhhhCCCC
Q psy359          336 LHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       336 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      .|+++++|.|.+|++.|.....|..|++.|.+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4678899999999999999999999999998864

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=3e-07  Score=53.21  Aligned_cols=32  Identities=19%  Similarity=0.483  Sum_probs=19.0

Q ss_pred             hCCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          365 HTGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       365 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      |.++++|.|.+|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            44555666666666666666666666665544

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=3.1e-07  Score=53.13  Aligned_cols=33  Identities=42%  Similarity=0.710  Sum_probs=30.4

Q ss_pred             cCCCCccccccccccccCchhHHHHhhhhCCCC
Q psy359          337 HFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       337 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      |.+++||+|.+|++.|.....|..|++.|.+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            678899999999999999999999999998764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.29  E-value=1.5e-07  Score=58.39  Aligned_cols=37  Identities=24%  Similarity=0.609  Sum_probs=21.3

Q ss_pred             hhhhhcCCCCccccc--cccccccCchhHHHHhhhhCCC
Q psy359          332 QHKRLHFPLRPYACT--QCDKTFKKKNHLTTHYRIHTGE  368 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  368 (405)
                      .|...|++++||+|.  .|++.|...+.|..|++.|.++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            344445666666663  4666666666666666666554

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.28  E-value=2.7e-07  Score=57.43  Aligned_cols=32  Identities=38%  Similarity=0.719  Sum_probs=19.2

Q ss_pred             cCCCCccccccccccccCchhHHHHhh-hhCCC
Q psy359          337 HFPLRPYACTQCDKTFKKKNHLTTHYR-IHTGE  368 (405)
Q Consensus       337 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  368 (405)
                      |++++||.|.+|++.|.....|..|++ .|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            455666666666666666666666666 55554

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=1.2e-07  Score=65.46  Aligned_cols=49  Identities=14%  Similarity=0.196  Sum_probs=44.9

Q ss_pred             chhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhccccccccccCC
Q psy359          355 KNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIHAVEDKG  405 (405)
Q Consensus       355 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~  405 (405)
                      +..|..|++.|.+++++.|..|++.|. ...|..|+ .+-+++||.|+.||
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~   50 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCG   50 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSC
T ss_pred             chHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCC
Confidence            356778999999999999999999995 99999999 89999999999997

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.26  E-value=1.2e-07  Score=58.75  Aligned_cols=40  Identities=18%  Similarity=0.399  Sum_probs=34.8

Q ss_pred             HHHHhhhhCCCCcccCC--ccccccCChHHHHHHHHhhcccc
Q psy359          358 LTTHYRIHTGEKPYQCD--ICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       358 l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      +..|+..|.++++|.|.  .|++.|.+...|..|+++|++++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            44566679999999996  79999999999999999998864

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.25  E-value=4.3e-07  Score=56.54  Aligned_cols=34  Identities=26%  Similarity=0.625  Sum_probs=29.5

Q ss_pred             hhCCCCcccCCccccccCChHHHHHHHH-hhcccc
Q psy359          364 IHTGEKPYQCDICGRGFAQSNDMKKHRR-TVHKAQ  397 (405)
Q Consensus       364 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~  397 (405)
                      +|.++++|.|.+|++.|.+...|..|++ +|.++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            4788999999999999999999999999 887775

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.23  E-value=8e-07  Score=48.73  Aligned_cols=28  Identities=36%  Similarity=0.657  Sum_probs=20.0

Q ss_pred             cccCCccccccCChHHHHHHHHhhcccc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      +|.|..|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5677777777777777777777777654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.23  E-value=7.1e-07  Score=51.98  Aligned_cols=32  Identities=22%  Similarity=0.488  Sum_probs=19.5

Q ss_pred             hCCCCcccCCc--cccccCChHHHHHHHHhhccc
Q psy359          365 HTGEKPYQCDI--CGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       365 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      |.++++|.|.+  |++.|.+.+.|..|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45556666663  666666666666666666554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.20  E-value=8.2e-08  Score=54.05  Aligned_cols=30  Identities=23%  Similarity=0.501  Sum_probs=17.8

Q ss_pred             ccccccccccccCchhHHHHhhhhCCCCcc
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRIHTGEKPY  371 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  371 (405)
                      ||+|.+|++.|...+.|..|++.|.+++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            456666666666666666666666555554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.20  E-value=8.3e-07  Score=48.66  Aligned_cols=28  Identities=43%  Similarity=0.895  Sum_probs=17.4

Q ss_pred             CcccCCccccccCChHHHHHHHHhhccc
Q psy359          369 KPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ++|.|..|++.|.....|..|++.|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4566666666666666666666665554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.18  E-value=1.3e-06  Score=47.52  Aligned_cols=27  Identities=30%  Similarity=0.826  Sum_probs=17.5

Q ss_pred             cccCCccccccCChHHHHHHHHhhccc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      +|.|..|++.|.+...|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.16  E-value=7.7e-07  Score=51.82  Aligned_cols=33  Identities=36%  Similarity=0.642  Sum_probs=30.1

Q ss_pred             cCCCCcccccc--ccccccCchhHHHHhhhhCCCC
Q psy359          337 HFPLRPYACTQ--CDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       337 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      |++++||.|.+  |++.|...+.|..|++.|.+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            67889999995  9999999999999999998764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.16  E-value=9.9e-07  Score=47.98  Aligned_cols=27  Identities=19%  Similarity=0.449  Sum_probs=15.2

Q ss_pred             cccCCccccccCChHHHHHHHHhhccc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ||.|+.|++.|.+...|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.14  E-value=6.7e-08  Score=54.43  Aligned_cols=32  Identities=22%  Similarity=0.478  Sum_probs=29.7

Q ss_pred             CcccCCccccccCChHHHHHHHHhhccccccc
Q psy359          369 KPYQCDICGRGFAQSNDMKKHRRTVHKAQIHA  400 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  400 (405)
                      +||+|..|++.|.+.+.|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   32 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVALG   32 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCCC
Confidence            47999999999999999999999999999873

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.14  E-value=1.1e-06  Score=48.16  Aligned_cols=30  Identities=27%  Similarity=0.748  Sum_probs=27.3

Q ss_pred             CCccccccccccccCchhHHHHhhhhCCCC
Q psy359          340 LRPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       340 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      ++||.|..|++.|.....|..|++.|.+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            468999999999999999999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.13  E-value=1.4e-06  Score=47.25  Aligned_cols=27  Identities=22%  Similarity=0.473  Sum_probs=17.5

Q ss_pred             cccCCccccccCChHHHHHHHHhhccc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      +|.|..|++.|.+...|..|++.|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            566666666666666666666666554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.13  E-value=1.1e-06  Score=47.72  Aligned_cols=29  Identities=38%  Similarity=0.811  Sum_probs=26.6

Q ss_pred             CccccccccccccCchhHHHHhhhhCCCC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      +||.|..|++.|.....|..|++.|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            57999999999999999999999998764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.13  E-value=1.4e-06  Score=47.31  Aligned_cols=27  Identities=33%  Similarity=0.779  Sum_probs=18.3

Q ss_pred             cccCCccccccCChHHHHHHHHhhccc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            566777777777777777776666654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.10  E-value=1.6e-06  Score=46.26  Aligned_cols=25  Identities=36%  Similarity=0.709  Sum_probs=16.3

Q ss_pred             CcccCCccccccCChHHHHHHHHhh
Q psy359          369 KPYQCDICGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H~~~~  393 (405)
                      ++|.|..|++.|.+...|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4566666666666666666666654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.10  E-value=1.7e-06  Score=46.97  Aligned_cols=29  Identities=45%  Similarity=1.022  Sum_probs=26.5

Q ss_pred             CccccccccccccCchhHHHHhhhhCCCC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      +||.|.+|++.|.....|..|++.|.+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            47999999999999999999999998764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.10  E-value=1.2e-06  Score=47.22  Aligned_cols=26  Identities=35%  Similarity=0.949  Sum_probs=14.8

Q ss_pred             CcccCCccccccCChHHHHHHHHhhc
Q psy359          369 KPYQCDICGRGFAQSNDMKKHRRTVH  394 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H~~~~h  394 (405)
                      ++|.|+.|++.|.+...|..|++.|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45555555555555555555555543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.10  E-value=2.5e-06  Score=56.62  Aligned_cols=42  Identities=21%  Similarity=0.195  Sum_probs=32.0

Q ss_pred             hcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCcccc
Q psy359          336 LHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGR  378 (405)
Q Consensus       336 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  378 (405)
                      .+.+++||+|.+|++.|.....|..|+++|++.. ..+.++..
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~~   48 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYIDL   48 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-cccccccC
Confidence            3667888888888888888888888888888754 34555543

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.08  E-value=1.9e-06  Score=47.10  Aligned_cols=30  Identities=20%  Similarity=0.522  Sum_probs=27.2

Q ss_pred             CccccccccccccCchhHHHHhhhhCCCCc
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKP  370 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  370 (405)
                      +||+|.+|++.|.....|..|++.|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            479999999999999999999999988753

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.35  E-value=4.7e-07  Score=49.40  Aligned_cols=27  Identities=33%  Similarity=0.748  Sum_probs=15.6

Q ss_pred             cccCCccccccCChHHHHHHHHhhccc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ||+|..|++.|.+...|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            455666666666666666665555543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=1.5e-06  Score=46.76  Aligned_cols=28  Identities=54%  Similarity=1.220  Sum_probs=25.6

Q ss_pred             CCccccccccccccCchhHHHHhhhhCC
Q psy359          340 LRPYACTQCDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       340 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  367 (405)
                      ++||+|..|++.|.....|..|++.|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4689999999999999999999998864

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.06  E-value=1.7e-06  Score=46.89  Aligned_cols=29  Identities=31%  Similarity=0.759  Sum_probs=26.5

Q ss_pred             CccccccccccccCchhHHHHhhhhCCCC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      +||.|..|++.|.....|..|++.|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            47999999999999999999999998764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.06  E-value=2.6e-06  Score=47.54  Aligned_cols=28  Identities=29%  Similarity=0.910  Sum_probs=14.5

Q ss_pred             CcccCC--ccccccCChHHHHHHHHhhccc
Q psy359          369 KPYQCD--ICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       369 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ++|.|.  .|++.|.+...|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            345555  4555555555555555555443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.06  E-value=2.8e-06  Score=47.39  Aligned_cols=30  Identities=37%  Similarity=0.801  Sum_probs=27.3

Q ss_pred             CCccccc--cccccccCchhHHHHhhhhCCCC
Q psy359          340 LRPYACT--QCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       340 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      ++||.|.  .|++.|.....|..|++.|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4789999  89999999999999999998864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.33  E-value=5.3e-07  Score=49.54  Aligned_cols=28  Identities=36%  Similarity=0.706  Sum_probs=15.5

Q ss_pred             CcccCCccccccCChHHHHHHHHhhccc
Q psy359          369 KPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ++|.|..|++.|.+...|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            3455555555555555555555555543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.05  E-value=2.8e-06  Score=56.39  Aligned_cols=33  Identities=18%  Similarity=0.473  Sum_probs=30.8

Q ss_pred             hCCCCcccCCccccccCChHHHHHHHHhhcccc
Q psy359          365 HTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       365 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      +.+++||+|..|++.|.+...|..|+++|+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            567899999999999999999999999999875

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.05  E-value=1.2e-06  Score=46.83  Aligned_cols=25  Identities=32%  Similarity=0.743  Sum_probs=14.0

Q ss_pred             CcccCCccccccCChHHHHHHHHhh
Q psy359          369 KPYQCDICGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H~~~~  393 (405)
                      +||+|..|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4555555555555555555555543

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.04  E-value=1.7e-06  Score=46.98  Aligned_cols=29  Identities=45%  Similarity=0.946  Sum_probs=26.5

Q ss_pred             CccccccccccccCchhHHHHhhhhCCCC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      +||.|.+|++.|.....|..|++.|.+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47999999999999999999999998764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.03  E-value=2e-06  Score=45.82  Aligned_cols=26  Identities=27%  Similarity=0.862  Sum_probs=14.2

Q ss_pred             cccCCccccccCChHHHHHHHHhhcc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      ||.|..|++.|.+...|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35555555555555555555555543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.02  E-value=2.6e-06  Score=47.14  Aligned_cols=27  Identities=33%  Similarity=0.962  Sum_probs=14.5

Q ss_pred             cccCC--ccccccCChHHHHHHHHhhccc
Q psy359          370 PYQCD--ICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       370 ~~~C~--~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ||.|.  .|++.|.+...|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45554  5555555555555555555443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.29  E-value=6.7e-07  Score=48.74  Aligned_cols=29  Identities=45%  Similarity=0.896  Sum_probs=26.3

Q ss_pred             CccccccccccccCchhHHHHhhhhCCCC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      +||+|.+|++.|.....|..|++.|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            47999999999999999999999998753

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.28  E-value=6.7e-07  Score=49.11  Aligned_cols=30  Identities=47%  Similarity=1.039  Sum_probs=27.0

Q ss_pred             CCccccccccccccCchhHHHHhhhhCCCC
Q psy359          340 LRPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       340 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      ++||+|.+|++.|.....|..|++.|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            368999999999999999999999998753

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.02  E-value=2.1e-06  Score=45.81  Aligned_cols=27  Identities=26%  Similarity=0.677  Sum_probs=24.7

Q ss_pred             CCccccccccccccCchhHHHHhhhhC
Q psy359          340 LRPYACTQCDKTFKKKNHLTTHYRIHT  366 (405)
Q Consensus       340 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  366 (405)
                      ++||.|..|++.|.....|..|++.|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468999999999999999999999874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.02  E-value=1.7e-06  Score=46.26  Aligned_cols=27  Identities=26%  Similarity=0.565  Sum_probs=24.6

Q ss_pred             CCccccccccccccCchhHHHHhhhhC
Q psy359          340 LRPYACTQCDKTFKKKNHLTTHYRIHT  366 (405)
Q Consensus       340 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  366 (405)
                      ++||+|..|++.|.....|..|++.|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999998874

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.01  E-value=2.8e-06  Score=47.00  Aligned_cols=29  Identities=52%  Similarity=1.031  Sum_probs=26.4

Q ss_pred             Cccccc--cccccccCchhHHHHhhhhCCCC
Q psy359          341 RPYACT--QCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       341 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      +||.|.  .|++.|.....|..|++.|.+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            479998  99999999999999999998864

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.96  E-value=3.7e-06  Score=44.71  Aligned_cols=27  Identities=33%  Similarity=0.863  Sum_probs=23.8

Q ss_pred             ccccccccccccCchhHHHHhhhhCCC
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRIHTGE  368 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  368 (405)
                      ||+|.+|++.|.....|..|++.|.++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            589999999999999999999999763

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.89  E-value=5.9e-06  Score=45.14  Aligned_cols=26  Identities=38%  Similarity=0.991  Sum_probs=12.3

Q ss_pred             ccccccccccccCchhHHHH-hhhhCC
Q psy359          342 PYACTQCDKTFKKKNHLTTH-YRIHTG  367 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H-~~~h~~  367 (405)
                      ||.|..|++.|.....|..| ++.|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            34455555555555555554 344443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.88  E-value=4.7e-06  Score=45.54  Aligned_cols=28  Identities=25%  Similarity=0.704  Sum_probs=24.9

Q ss_pred             CcccCCccccccCChHHHHHH-HHhhccc
Q psy359          369 KPYQCDICGRGFAQSNDMKKH-RRTVHKA  396 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H-~~~~h~~  396 (405)
                      ++|.|..|++.|.+...|..| +++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            479999999999999999999 6777765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.11  E-value=1.7e-06  Score=45.65  Aligned_cols=24  Identities=42%  Similarity=0.951  Sum_probs=13.3

Q ss_pred             cccCCccccccCChHHHHHHHHhh
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~  393 (405)
                      ||.|+.|++.|.+...|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            455555555555555555555543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.07  E-value=2.1e-06  Score=45.32  Aligned_cols=26  Identities=38%  Similarity=0.943  Sum_probs=23.7

Q ss_pred             CccccccccccccCchhHHHHhhhhC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHT  366 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~  366 (405)
                      +||.|..|++.|.....|..|++.|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47999999999999999999998874

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.65  E-value=1.9e-05  Score=42.54  Aligned_cols=25  Identities=28%  Similarity=0.797  Sum_probs=13.5

Q ss_pred             cccCC--ccccccCChHHHHHHHHhhc
Q psy359          370 PYQCD--ICGRGFAQSNDMKKHRRTVH  394 (405)
Q Consensus       370 ~~~C~--~C~~~f~~~~~l~~H~~~~h  394 (405)
                      +|.|.  .|++.|.+...|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45555  55555555555555555543

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.62  E-value=2.4e-05  Score=42.15  Aligned_cols=27  Identities=37%  Similarity=0.913  Sum_probs=24.7

Q ss_pred             Cccccc--cccccccCchhHHHHhhhhCC
Q psy359          341 RPYACT--QCDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       341 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  367 (405)
                      ++|.|.  .|++.|...+.|..|++.|.+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            469999  999999999999999999864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.49  E-value=0.00012  Score=48.17  Aligned_cols=48  Identities=19%  Similarity=0.380  Sum_probs=42.3

Q ss_pred             cccccccCchhHHHHh-hhhCCCC------cccCC--ccccccCChHHHHHHHHhhc
Q psy359          347 QCDKTFKKKNHLTTHY-RIHTGEK------PYQCD--ICGRGFAQSNDMKKHRRTVH  394 (405)
Q Consensus       347 ~C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~h  394 (405)
                      .|++.|.+...|..|+ ..|-+.+      .|.|.  .|++.+.....|..|+++.|
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            3999999999999998 4776654      79998  79999999999999999876

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.26  E-value=0.00026  Score=46.56  Aligned_cols=48  Identities=25%  Similarity=0.483  Sum_probs=41.2

Q ss_pred             cchhccCChHHHHHHH-hhhcCCC------Ccccc--cchHhhhChHHHHHHHhhhC
Q psy359          193 FCEKSFKRKLHLKVHT-RTHTGEK------PYACY--LCDKRFAQISDRIKHLKSSH  240 (405)
Q Consensus       193 ~C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~h  240 (405)
                      .|++.|.+...|..|+ ..|.+.+      +|.|.  .|++.+.....|..|++..|
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            4999999999999998 4677655      79997  69999999999999998754

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.44  E-value=0.0044  Score=49.78  Aligned_cols=75  Identities=25%  Similarity=0.457  Sum_probs=53.9

Q ss_pred             Ccccc--hHHHHhhhhhcCCCCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhhcccccc
Q psy359          322 VCGEY--KKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKAQIH  399 (405)
Q Consensus       322 ~C~~~--~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  399 (405)
                      .|...  ...+..|.. .=.-+++.|+.|+..+ .+..|..|+...-..+...|+.|+..|. ...|..|..++.|+.++
T Consensus        89 GC~~~~~~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A           89 GCLHKMELRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             TCCCEEEGGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             CCCceecHhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            45544  556666652 2344678999999988 5667999998888888889999998764 57789999888887765

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.40  E-value=0.0028  Score=48.00  Aligned_cols=52  Identities=19%  Similarity=0.443  Sum_probs=39.2

Q ss_pred             CccccccccccccCchhHHHHh--hhh-------------------------------CCCCcccCCccccccCChHHHH
Q psy359          341 RPYACTQCDKTFKKKNHLTTHY--RIH-------------------------------TGEKPYQCDICGRGFAQSNDMK  387 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~--~~h-------------------------------~~~~~~~C~~C~~~f~~~~~l~  387 (405)
                      +++.|.+|+..|.+...+..|.  +.|                               .+.+.|-|.+|...|.+...|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            4567777777777777777776  222                               2345688999999999999999


Q ss_pred             HHHHh
Q psy359          388 KHRRT  392 (405)
Q Consensus       388 ~H~~~  392 (405)
                      .|+..
T Consensus       111 ~H~~g  115 (127)
T 1zu1_A          111 SHYIG  115 (127)
T ss_dssp             HHHTS
T ss_pred             HHHCC
Confidence            99865

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.19  E-value=0.0052  Score=46.53  Aligned_cols=81  Identities=19%  Similarity=0.210  Sum_probs=49.8

Q ss_pred             ccceecCCCcccCCChHHHHHHHh-hhccCCCcccccc---CCCCCcCCCcccchHHHHhhhhhcCCCCccccccccccc
Q psy359          277 KLIFKCDLCGNILSSKHILQEHVR-VVHMGLSRKYHYE---YKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTF  352 (405)
Q Consensus       277 ~~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~~~~~~~~---~~~~~~C~~C~~~~~~l~~H~~~h~~~~~~~C~~C~~~f  352 (405)
                      ..++.|.+|+..|.+.+.+..|.. ..|...-+....+   ..+..     +.. .....+...+.+.+.|.|.+|+.+|
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~C~~C~~~f  103 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVP-----AKK-FKAAPAEISDGEDRSKCCPVCNMTF  103 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCS-----CCC-CSCCSSCCSSCCCTTTEETTTTEEC
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCC-----CCc-cCCCccccccCCCCCeEcCCCCCEe
Confidence            356899999999999999999983 1232210000000   00000     000 0000122345667889999999999


Q ss_pred             cCchhHHHHhh
Q psy359          353 KKKNHLTTHYR  363 (405)
Q Consensus       353 ~~~~~l~~H~~  363 (405)
                      .+...|..|+.
T Consensus       104 ~s~~~~~~H~~  114 (127)
T 1zu1_A          104 SSPVVAESHYI  114 (127)
T ss_dssp             SSHHHHHHHHT
T ss_pred             CCHHHHHHHHC
Confidence            99999999975

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.97  E-value=0.0014  Score=48.78  Aligned_cols=31  Identities=23%  Similarity=0.299  Sum_probs=21.8

Q ss_pred             hhcCCCCccccccccccccCchhHHHHhhhh
Q psy359          335 RLHFPLRPYACTQCDKTFKKKNHLTTHYRIH  365 (405)
Q Consensus       335 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  365 (405)
                      ..|+|+++|.|..|++.|.+...|..|+++.
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            4466777777777777777777777776653

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.94  E-value=0.0047  Score=36.42  Aligned_cols=24  Identities=17%  Similarity=0.339  Sum_probs=13.9

Q ss_pred             CcccCCccccccCChHHHHHHHHh
Q psy359          369 KPYQCDICGRGFAQSNDMKKHRRT  392 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H~~~  392 (405)
                      .+|.|+.|+..|.....|+.|++.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            345566666666666666666553

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.88  E-value=0.0016  Score=48.35  Aligned_cols=32  Identities=28%  Similarity=0.405  Sum_probs=29.0

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHh
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT  392 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  392 (405)
                      +...|.|+++|.|..|++.|.+...|..|+++
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            34568999999999999999999999999887

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.12  E-value=0.049  Score=43.58  Aligned_cols=82  Identities=18%  Similarity=0.284  Sum_probs=58.5

Q ss_pred             ccceec--CCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccc--hHHHHhhhhhcCCCCccccccccccc
Q psy359          277 KLIFKC--DLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEY--KKQLLQHKRLHFPLRPYACTQCDKTF  352 (405)
Q Consensus       277 ~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~--~~~l~~H~~~h~~~~~~~C~~C~~~f  352 (405)
                      .....|  .-|+..+. ...|..|...--          ..+ ..|+.|+..  ...|..|....-+.++..|+.|+..+
T Consensus        80 ~l~v~C~n~GC~~~~~-~~~l~~H~~~C~----------~~~-v~C~~C~~~~~r~~l~~H~~~~C~~r~~~C~~C~~~~  147 (170)
T 3hcs_A           80 SLMVKCPNEGCLHKME-LRHLEDHQAHCE----------FAL-MDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASM  147 (170)
T ss_dssp             TSEEECCSTTCCCEEE-GGGHHHHHTTCT----------TSE-EECTTTCCEEEGGGHHHHHHHTCTTCEEECTTTCCEE
T ss_pred             hcccCCCCCCCCceec-HhHHHHHHhcCC----------cee-eECCCCChHHHHHHHHHHhhhhCCCCCeECCCCCCcc
Confidence            455778  56877654 456777765211          111 578999885  88999999888888999999999988


Q ss_pred             cCchhHHHHhhhhCCCCcc
Q psy359          353 KKKNHLTTHYRIHTGEKPY  371 (405)
Q Consensus       353 ~~~~~l~~H~~~h~~~~~~  371 (405)
                      .. ..|..|...+.|..++
T Consensus       148 ~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          148 AF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             EG-GGHHHHHTTCCC----
T ss_pred             CH-HHHHhHHHhCcChhhh
Confidence            65 5689999988876643

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.95  E-value=0.016  Score=34.24  Aligned_cols=24  Identities=17%  Similarity=0.218  Sum_probs=22.3

Q ss_pred             ccceecCCCcccCCChHHHHHHHh
Q psy359          277 KLIFKCDLCGNILSSKHILQEHVR  300 (405)
Q Consensus       277 ~~~~~C~~C~~~f~~~~~l~~H~~  300 (405)
                      ...|.|+.|+..|+....|+.|++
T Consensus        10 ~~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           10 GGRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SSCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CCceeCCcccccccchHHHHhhhh
Confidence            357999999999999999999999

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.30  E-value=0.033  Score=30.76  Aligned_cols=27  Identities=26%  Similarity=0.624  Sum_probs=22.1

Q ss_pred             cccCCccccccCChHHHHHHHHhhccc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      .|.|++|.+.|.++..|..|-...|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            478888888888888888888887764

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.06  E-value=0.071  Score=29.39  Aligned_cols=28  Identities=32%  Similarity=0.370  Sum_probs=25.2

Q ss_pred             ceecCCCcccCCChHHHHHHHhhhccCC
Q psy359          279 IFKCDLCGNILSSKHILQEHVRVVHMGL  306 (405)
Q Consensus       279 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  306 (405)
                      .|.|++|-+.|.+...|..|....|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            5999999999999999999999888653

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=91.06  E-value=0.15  Score=27.08  Aligned_cols=24  Identities=25%  Similarity=0.740  Sum_probs=19.5

Q ss_pred             cCCccccccCChHHHHHHHHhhcc
Q psy359          372 QCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       372 ~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      .|.+|.+.+....+|..|++.-|-
T Consensus        11 hcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            588888888888888888887653

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=89.15  E-value=0.097  Score=34.69  Aligned_cols=17  Identities=35%  Similarity=0.970  Sum_probs=13.4

Q ss_pred             cccceecCCCcccCCCh
Q psy359          276 RKLIFKCDLCGNILSSK  292 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~  292 (405)
                      .+..|+|+.||..|-.+
T Consensus        48 e~F~FkCP~CgEEFyG~   64 (95)
T 2k5c_A           48 EEFVFKCPVCGEEFYGK   64 (95)
T ss_dssp             HHSEEECTTTCCEEETT
T ss_pred             HHHhhcCCCccHHHhcc
Confidence            56789999999887553

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=87.75  E-value=0.49  Score=28.74  Aligned_cols=42  Identities=24%  Similarity=0.482  Sum_probs=30.5

Q ss_pred             eecCCCcccCCChHHHHHHHhhhccCCCccccccCCCCCcCCCcccc----hHHHHhhh
Q psy359          280 FKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEY----KKQLLQHK  334 (405)
Q Consensus       280 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~C~~C~~~----~~~l~~H~  334 (405)
                      ..|++|...--+..+|..|...             =|+.+||+|...    .+.|+.|-
T Consensus         4 mvC~~C~~ECET~kEl~~H~~s-------------Cp~gqCPYC~~~~e~tesAlQaHf   49 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESHRQS-------------CINGQCPYCMTITEATESALQAHY   49 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHHHHH-------------HTTTBCTTTCCBCCSSHHHHHHHH
T ss_pred             chhhHHHhhhhhHHHHHHHhcc-------------CCCCCCCcccCcCCcCHHHHHHHH
Confidence            4688898888888899999875             233567777654    66666664

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=86.78  E-value=0.52  Score=26.03  Aligned_cols=25  Identities=12%  Similarity=0.204  Sum_probs=22.4

Q ss_pred             cccceecCCCcccCCChHHHHHHHh
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVR  300 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~  300 (405)
                      ....+.|..|+.+|++...+..|.+
T Consensus         5 ~~~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            5 EVMKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCCCSEETTTTEECSSHHHHHHHHH
T ss_pred             ccCcCeeccccceehhhHHHhhhhe
Confidence            3457899999999999999999998

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=86.14  E-value=0.16  Score=34.27  Aligned_cols=48  Identities=19%  Similarity=0.606  Sum_probs=30.5

Q ss_pred             Ccccc-ccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHH
Q psy359          341 RPYAC-TQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHR  390 (405)
Q Consensus       341 ~~~~C-~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  390 (405)
                      .+..| ..|+..+.. ..|..|+...-..++..|.+|+..|. ...|..|.
T Consensus        15 ~~v~C~~~C~~~v~r-~~l~~H~~~~C~~r~v~C~~C~~~~~-~~~l~~H~   63 (76)
T 2yuc_A           15 NVIPCPNRCPMKLSR-RDLPAHLQHDCPKRRLKCEFCGCDFS-GEAYESHE   63 (76)
T ss_dssp             SCCBCTTCCSCBCCS-SSSTTTTTTSCTTSCCCCSSSCCCCC-HHHHHHTT
T ss_pred             cccCCCccccHHhhH-hHHHhhCHhhCCCcceECCCCCCccC-HHHHHHHH
Confidence            45677 467776654 45677766555666777888877765 34456664

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=85.36  E-value=0.57  Score=27.54  Aligned_cols=14  Identities=14%  Similarity=0.793  Sum_probs=10.5

Q ss_pred             ceecCCCcccCCCh
Q psy359          279 IFKCDLCGNILSSK  292 (405)
Q Consensus       279 ~~~C~~C~~~f~~~  292 (405)
                      .|.|--||+.|+..
T Consensus         3 iY~C~rCg~~fs~~   16 (48)
T 4ayb_P            3 VYRCGKCWKTFTDE   16 (48)
T ss_dssp             --CCCCTTTTCCCC
T ss_pred             EEEeeccCCCccHH
Confidence            58999999999775

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=83.94  E-value=0.53  Score=32.22  Aligned_cols=25  Identities=32%  Similarity=0.727  Sum_probs=12.7

Q ss_pred             cccccccccccCchhHHHHhhhhCCCCc
Q psy359          343 YACTQCDKTFKKKNHLTTHYRIHTGEKP  370 (405)
Q Consensus       343 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~  370 (405)
                      ..|.+||+.|..   |..|+..++|..|
T Consensus        22 iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             eEecccchhhHH---HHHHHHHccCCCH
Confidence            455555555552   4455555545443

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=81.07  E-value=1.3  Score=23.53  Aligned_cols=26  Identities=27%  Similarity=0.441  Sum_probs=22.5

Q ss_pred             ceecCCCcccCCChHHHHHHHhhhcc
Q psy359          279 IFKCDLCGNILSSKHILQEHVRVVHM  304 (405)
Q Consensus       279 ~~~C~~C~~~f~~~~~l~~H~~~~h~  304 (405)
                      .--|..|.+.++.-.+|..|++..|.
T Consensus         9 kqhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A            9 KQHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            34699999999999999999997764

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=80.11  E-value=3.9  Score=24.87  Aligned_cols=47  Identities=26%  Similarity=0.514  Sum_probs=35.6

Q ss_pred             cccCCCccccCChhhHHHHHHhhcCcccccCCCCCcCCCchHhhhcHHHHHHhhccCCCCccCccchh-ccCChHHHHHH
Q psy359          129 YPCDQCDRTYQTKKSLYVHRRAHLGIVYRYKSKTDRCELCDKVVTNLAAHHNEVHAHERKFPCTFCEK-SFKRKLHLKVH  207 (405)
Q Consensus       129 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~l~~~~~~~h~~~~~~~C~~C~~-~f~~~~~l~~H  207 (405)
                      ..|.+|.....+..+|..|...-..                                   -+|+.|-. ..++.+.|+.|
T Consensus         4 mvC~~C~~ECET~kEl~~H~~sCp~-----------------------------------gqCPYC~~~~e~tesAlQaH   48 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESHRQSCIN-----------------------------------GQCPYCMTITEATESALQAH   48 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHHHHHHTT-----------------------------------TBCTTTCCBCCSSHHHHHHH
T ss_pred             chhhHHHhhhhhHHHHHHHhccCCC-----------------------------------CCCCcccCcCCcCHHHHHHH
Confidence            5799999999999999999876433                                   26666653 34667888888


Q ss_pred             Hhh
Q psy359          208 TRT  210 (405)
Q Consensus       208 ~~~  210 (405)
                      .++
T Consensus        49 fkv   51 (57)
T 2k9h_A           49 YSI   51 (57)
T ss_dssp             HTT
T ss_pred             HHH
Confidence            765

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=80.10  E-value=0.96  Score=27.54  Aligned_cols=20  Identities=20%  Similarity=0.526  Sum_probs=17.2

Q ss_pred             cccccccccccCchhHHHHh
Q psy359          343 YACTQCDKTFKKKNHLTTHY  362 (405)
Q Consensus       343 ~~C~~C~~~f~~~~~l~~H~  362 (405)
                      -+|.+|+..|.....|+.|+
T Consensus        14 ~eC~lC~vkYs~r~slqDHI   33 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHI   33 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccccccCcccccccchhhhh
Confidence            58888888888888888886

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	405
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	6e-11
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-09
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	4e-09
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	7e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-08
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	8e-08
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-08
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	9e-07
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	5e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-08
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	4e-07
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	4e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	6e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	5e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-07
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	4e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	5e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-07
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	9e-07
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	4e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.002
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	6e-06
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	8e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	7e-06
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	9e-06
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.001
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.004
d1wira_	121	g.37.1.5 (A:) Protein arginine N-methyltransferase	6e-05
d2dlqa3	30	g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3	3e-04
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	3e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	6e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.002

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (133), Expect = 6e-11
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYR-IHTGEKPYQCDI 375
           +PY C  C K F + +HL  H + +HT E+P++C +
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (111), Expect = 4e-08
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTR-THTGEKPYAC 219
            + + C  C K F R  HL  H +  HT E+P+ C
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 2e-05
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 366 TGEKPYQCDICGRGFAQSNDMKKHRRTVH 394
           +  KPY C  CG+GF++ + +  H + VH
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVH 29

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.002
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 212 TGEKPYACYLCDKRFAQISDRIKHLKSSH 240
           +  KPY C  C K F++      H+K  H
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVH 29

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (121), Expect = 2e-09
 Identities = 17/32 (53%), Positives = 19/32 (59%)

Query: 363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRTVH 394
           R H+GEKPY+C IC   F QS  MK H    H
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (106), Expect = 2e-07
 Identities = 16/32 (50%), Positives = 19/32 (59%)

Query: 209 RTHTGEKPYACYLCDKRFAQISDRIKHLKSSH 240
           RTH+GEKPY CY+C  RF Q      H+   H
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (91), Expect = 3e-05
 Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 335 RLHFPLRPYACTQCDKTFKKKNHLTTHY-RIHTGE 368
           R H   +PY C  C   F +   +  H  + HT  
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (82), Expect = 4e-04
 Identities = 8/34 (23%), Positives = 14/34 (41%)

Query: 182 VHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEK 215
            H+ E+ + C  C   F +   +K+H      E 
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (118), Expect = 4e-09
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 343 YACTQ--CDKTFKKKNHLTTHYRIHTGEKPYQCD 374
           ++C +  C K+F  K HL  H ++H+  + Y C+
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (110), Expect = 7e-08
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 190 PCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
           P   C KSF  K HLK H + H+  + Y C
Sbjct: 5   PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (116), Expect = 1e-08
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRTVH 394
           R HTGEKPY C  C + F Q   +  H +  H
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (106), Expect = 2e-07
 Identities = 20/36 (55%), Positives = 22/36 (61%)

Query: 209 RTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDF 244
           RTHTGEKPYAC  CDK F Q      H K  H+ +F
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (100), Expect = 2e-06
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 335 RLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEK 369
           R H   +PYAC+ CDKTF++K  L  H++ +    
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 1e-05
 Identities = 9/34 (26%), Positives = 19/34 (55%)

Query: 182 VHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEK 215
            H  E+ + C+ C+K+F++K  L +H + +    
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (115), Expect = 1e-08
 Identities = 14/29 (48%), Positives = 22/29 (75%)

Query: 364 IHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           IH+GEKPY C  CG+ F++S+ + +H+R 
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRV 29

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (109), Expect = 8e-08
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGE 368
           +PY C +C K F + + L  H R+HTGE
Sbjct: 6   KPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (104), Expect = 4e-07
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 182 VHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGE 214
           +H+ E+ + C  C K+F R   L  H R HTGE
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 211 HTGEKPYACYLCDKRFAQISDRIKHLK 237
           H+GEKPY C  C K F++ S  ++H +
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQR 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 48.0 bits (115), Expect = 1e-08
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEK 369
           R + C  C + F ++ HL  HYR HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 42.6 bits (101), Expect = 9e-07
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEK 215
           R F C  C ++F R+ HLK H R+HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.3 bits (82), Expect = 4e-04
 Identities = 8/24 (33%), Positives = 16/24 (66%)

Query: 369 KPYQCDICGRGFAQSNDMKKHRRT 392
           + + C++C R FA+   +K+H R+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRS 24

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (115), Expect = 1e-08
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
           + Y C QC K+F  K+    H  +H G +PY C +CG+ F   + +  H + 
Sbjct: 2   KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 1e-05
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLK 237
           ++ +PC  C KSF  K     H   H G +PY C +C K+F      + H+K
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 5e-05
 Identities = 20/46 (43%), Positives = 25/46 (54%)

Query: 320 CDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIH 365
           C     +K Q  +H  +H  LRPY C  C K FK K+HL  H +IH
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.4 bits (113), Expect = 2e-08
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
             R  TG KP+QC  C R F++S+ +  HR+ 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.0 bits (104), Expect = 4e-07
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKHLK 237
            TR  TG KP+ C  CD+ F++      H K
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.9 bits (91), Expect = 2e-05
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTG 367
             R    ++P+ C  CD++F + +HL  H + H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (82), Expect = 4e-04
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTG 213
                   + F C  C++SF R  HL +H + H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (107), Expect = 2e-07
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
                   + Y+CD CG+ F+ S+D+ KHRRT
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRT 34

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (106), Expect = 2e-07
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGE 368
           + +      R Y C +C K+F   + L+ H R HTGE
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (95), Expect = 6e-06
 Identities = 14/38 (36%), Positives = 16/38 (42%)

Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGE 214
                     R++ C  C KSF     L  H RTHTGE
Sbjct: 1   GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (88), Expect = 5e-05
 Identities = 9/31 (29%), Positives = 12/31 (38%)

Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKHLK 237
                   + Y C  C K F+  SD  KH +
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRR 33

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (104), Expect = 3e-07
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEK 369
           + +AC +C K F + +HL+ H + H  +K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 2e-05
 Identities = 12/27 (44%), Positives = 14/27 (51%)

Query: 189 FPCTFCEKSFKRKLHLKVHTRTHTGEK 215
           F C  C K F R  HL  H +TH  +K
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.001
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 369 KPYQCDICGRGFAQSNDMKKHRRT 392
           K + C  C + F +S+ + KH +T
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKT 24

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.8 bits (104), Expect = 4e-07
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTG 367
           +P+ C  C + F + +HLTTH R HTG
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTG 213
           ++ F C  C ++F R  HL  H RTHTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.6 bits (88), Expect = 5e-05
 Identities = 12/25 (48%), Positives = 18/25 (72%)

Query: 368 EKPYQCDICGRGFAQSNDMKKHRRT 392
           +KP+QC IC R F++S+ +  H RT
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRT 25

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (103), Expect = 5e-07
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 341 RPYACT--QCDKTFKKKNHLTTHYRIHTGEK 369
           RP+ CT   C K F + + L  H R HTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 3e-05
 Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 187 RKFPCTF--CEKSFKRKLHLKVHTRTHTGEK 215
           R F CT+  C K F R   L+ H RTHTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 9e-07
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 341 RPYACTQ--CDKTFKKKNHLTTHYRIHTGE 368
           +P+ CT   C K++ +  +L TH R HTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 1e-04
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 187 RKFPCTF--CEKSFKRKLHLKVHTRTHTGE 214
           +   CTF  C KS+ R  +LK H R+HTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.3 bits (97), Expect = 4e-06
 Identities = 7/28 (25%), Positives = 14/28 (50%)

Query: 365 HTGEKPYQCDICGRGFAQSNDMKKHRRT 392
            +G++P+ C IC   F    +  +H + 
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKV 29

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (90), Expect = 3e-05
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGE 368
           RP+ C  C   F  K +   H ++HT  
Sbjct: 6   RPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (83), Expect = 2e-04
 Identities = 9/32 (28%), Positives = 14/32 (43%)

Query: 183 HAHERKFPCTFCEKSFKRKLHLKVHTRTHTGE 214
            + +R F C  C  +F  K +   H + HT  
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 0.002
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 211 HTGEKPYACYLCDKRFAQISDRIKHLK 237
            +G++P+ C +C   F   ++  +HLK
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLK 28

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (95), Expect = 6e-06
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 341 RPYACTQ--CDKTFKKKNHLTTHYRIHTGE 368
           +P+ CT   C K F    +L TH RIHTG+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 8e-04
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 187 RKFPCTF--CEKSFKRKLHLKVHTRTHTGE 214
           + F CTF  C K F    +L+ H R HTG+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (95), Expect = 7e-06
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHT 366
           +PY C +C K F + + L  H RIHT
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.0 bits (94), Expect = 9e-06
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 341 RPYACTQ--CDKTFKKKNHLTTHYRIHTG 367
           RPYAC    CD+ F +   LT H RIHTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.2 bits (79), Expect = 0.001
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 187 RKFPCTF--CEKSFKRKLHLKVHTRTHTG 213
           R + C    C++ F R   L  H R HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.1 bits (89), Expect = 4e-05
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 341 RPYACTQ--CDKTFKKKNHLTTHYRIHTGE 368
           RPY+C    CDK F + + L  H + H  +
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 186 ERKFPCTF--CEKSFKRKLHLKVHTRTHTGE 214
           +R + C    C+K+F R   L  H ++H  +
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.7 bits (75), Expect = 0.004
 Identities = 8/27 (29%), Positives = 19/27 (70%), Gaps = 2/27 (7%)

Query: 368 EKPYQCDI--CGRGFAQSNDMKKHRRT 392
           ++PY CD   C + F +++D+ +H+++
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKS 27

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 121

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.2 bits (94), Expect = 6e-05
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 214 EKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNK 250
            +   C  CD+ FA   +   H K  H F+ +S+ +K
Sbjct: 13  RQHTPCLFCDRLFASAEETFSHCKLEHQFNIDSMVHK 49

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (82), Expect = 3e-04
 Identities = 12/29 (41%), Positives = 23/29 (79%)

Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGE 214
           E+ F C+ C+++F+R++ L++H  +HTGE
Sbjct: 2   EQVFTCSVCQETFRRRMELRLHMVSHTGE 30

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.6 bits (82), Expect = 3e-04
 Identities = 14/25 (56%), Positives = 20/25 (80%)

Query: 368 EKPYQCDICGRGFAQSNDMKKHRRT 392
           EKP+ CDICGR FA+S++ K+H + 
Sbjct: 1   EKPFACDICGRKFARSDERKRHTKI 25

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.3 bits (81), Expect = 5e-04
 Identities = 8/45 (17%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 327 KKQLLQHKRLHFPLRPYACTQCD--KTFKKKNHLTTHYRIHTGEK 369
            +  +       P + + C      KTFK++ ++ +H + H  ++
Sbjct: 3   PRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.1 bits (78), Expect = 0.002
 Identities = 7/34 (20%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 361 HYRIHTGEKPYQCDICGRG--FAQSNDMKKHRRT 392
            Y     +K ++C   G    F +  +++ H +T
Sbjct: 9   KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT 42

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 6e-04
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 2/28 (7%)

Query: 341 RPYACTQ--CDKTFKKKNHLTTHYRIHT 366
           RPY C    C+K F +  +L +H   H 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)

Query: 187 RKFPCTF--CEKSFKRKLHLKVHTRTHT 212
           R + C F  C K F +  +LK H  TH 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	405
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.62
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.42
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.19
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.19
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.13
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.12
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.11
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.11
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.11
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.08
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.08
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.06
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.04
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.99
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.95
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.92
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.92
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.92
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.91
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.9
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.88
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.86
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.86
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.83
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.79
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.75
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.75
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.73
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.6
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.6
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.57
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.54
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.5
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.5
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.35
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.35
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.34
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.32
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.26
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.19
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.12
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.07
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.05
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.04
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.04
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.97
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.97
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.87
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.86
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.82
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.81
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.76
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.71
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.68
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.66
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.57
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.57
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.54
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.51
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.46
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.43
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.35
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.25
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.24
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.15
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.11
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.11
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.11
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.07
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.06
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.03
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.99
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.88
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.88
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.87
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.86
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.86
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.79
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.67
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.55
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.53
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.38
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.3
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.17
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.12
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.08
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.05
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.02
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.61
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.48
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.37
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.33
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.21
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.79
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.57
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.5
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.18
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.45
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.45
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.89
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.89
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	91.98
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	91.56
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.2
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.99
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.88
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	90.12
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	90.1
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	89.94
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	88.16
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.14
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	87.13
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	87.11
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.92
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	84.79
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	84.07
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	83.61
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	83.3
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	83.01
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	82.24
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	80.62

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1e-16  Score=101.29  Aligned_cols=53  Identities=32%  Similarity=0.788  Sum_probs=50.8

Q ss_pred             CCccccccccccccCchhHHHHhhhhCCCCcccCCccccccCChHHHHHHHHhh
Q psy359          340 LRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       340 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  393 (405)
                      |+||+| .||++|.....|..|+++|.|++||.|.+|++.|.+.+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            589999 59999999999999999999999999999999999999999999876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=3.5e-14  Score=89.45  Aligned_cols=53  Identities=34%  Similarity=0.766  Sum_probs=50.1

Q ss_pred             CCCccCccchhccCChHHHHHHHhhhcCCCCcccccchHhhhChHHHHHHHhhh
Q psy359          186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLKSS  239 (405)
Q Consensus       186 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  239 (405)
                      +++|.|. |++.|.....|..|+++|++++||.|..|++.|.....|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4789995 9999999999999999999999999999999999999999999864

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=2.7e-12  Score=73.38  Aligned_cols=37  Identities=35%  Similarity=0.694  Sum_probs=24.4

Q ss_pred             hhhhhcCCCCccccccccccccCchhHHHHhhhhCCC
Q psy359          332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGE  368 (405)
Q Consensus       332 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  368 (405)
                      +|+++|++++||+|.+||++|...+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3566666666666666666666666666666666654

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=4.8e-12  Score=72.07  Aligned_cols=35  Identities=40%  Similarity=0.996  Sum_probs=21.0

Q ss_pred             CCccccccccccccCchhHHHHhh-hhCCCCcccCC
Q psy359          340 LRPYACTQCDKTFKKKNHLTTHYR-IHTGEKPYQCD  374 (405)
Q Consensus       340 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  374 (405)
                      +|||+|.+||+.|...+.|..|++ +|.|++||+|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            455666666666666666666654 46666666664

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=6e-12  Score=71.92  Aligned_cols=37  Identities=35%  Similarity=0.698  Sum_probs=35.2

Q ss_pred             HHhhhhCCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          360 THYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       360 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      .|+++|.+++||.|+.|++.|.+.++|..|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4889999999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.3e-11  Score=67.40  Aligned_cols=31  Identities=42%  Similarity=0.890  Sum_probs=16.8

Q ss_pred             hCCCCcccCCccccccCChHHHHHHHHhhcc
Q psy359          365 HTGEKPYQCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       365 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      |+|++||+|..|+++|.+.+.|..|+++|.|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            4555555555555555555555555555544

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.5e-11  Score=69.15  Aligned_cols=32  Identities=41%  Similarity=0.812  Sum_probs=16.7

Q ss_pred             hhCCCCcccCCccccccCChHHHHHHHHhhcc
Q psy359          364 IHTGEKPYQCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       364 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      +|+|++||+|.+|++.|.+.+.|..|+++||.
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            44555555555555555555555555555544

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=2e-11  Score=69.48  Aligned_cols=37  Identities=27%  Similarity=0.659  Sum_probs=34.0

Q ss_pred             CCCcccCCccccccCChHHHHHHHH-hhcccccccccc
Q psy359          367 GEKPYQCDICGRGFAQSNDMKKHRR-TVHKAQIHAVED  403 (405)
Q Consensus       367 ~~~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~~~~~~~  403 (405)
                      .++||+|..|++.|...++|..|++ +|.+++||.|..
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4689999999999999999999986 699999999974

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=2.3e-11  Score=66.33  Aligned_cols=33  Identities=42%  Similarity=0.931  Sum_probs=31.6

Q ss_pred             hcCCCCccccccccccccCchhHHHHhhhhCCC
Q psy359          336 LHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGE  368 (405)
Q Consensus       336 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  368 (405)
                      +|++++||+|.+|+++|...+.|..|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999985

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.8e-11  Score=68.04  Aligned_cols=35  Identities=40%  Similarity=0.812  Sum_probs=33.0

Q ss_pred             hhcCCCCccccccccccccCchhHHHHhhhhCCCC
Q psy359          335 RLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       335 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      ++|++++||+|.+|+++|...+.|..|+++|++++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            58999999999999999999999999999999764

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=2.6e-11  Score=68.69  Aligned_cols=34  Identities=29%  Similarity=0.768  Sum_probs=21.8

Q ss_pred             hhhhcCCCCccccccccccccCchhHHHHhhhhC
Q psy359          333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHT  366 (405)
Q Consensus       333 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  366 (405)
                      |.++|++++||+|.+|++.|...+.|..|++.|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            5566666666666666666666666666666654

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.6e-11  Score=67.40  Aligned_cols=34  Identities=50%  Similarity=0.863  Sum_probs=23.7

Q ss_pred             hhhCCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       363 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ++|+|++||+|++|++.|.+..+|..|++.+|++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            3567777777777777777777777777666654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=2.9e-11  Score=68.46  Aligned_cols=35  Identities=37%  Similarity=0.658  Sum_probs=32.6

Q ss_pred             HhhhhCCCCcccCCccccccCChHHHHHHHHhhcc
Q psy359          361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       361 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      |.+.|+|++||+|..|++.|.+.++|..|+++|-+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67899999999999999999999999999998754

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=8e-11  Score=65.96  Aligned_cols=35  Identities=26%  Similarity=0.526  Sum_probs=31.3

Q ss_pred             hhcCCCCccccccccccccCchhHHHHhhhhCCCC
Q psy359          335 RLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       335 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      ++|+|++||+|++|++.|...+.|..|++.++++.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            47999999999999999999999999998776543

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.95  E-value=1.7e-10  Score=63.78  Aligned_cols=31  Identities=29%  Similarity=0.635  Sum_probs=16.6

Q ss_pred             cCCCCccccccccccccCchhHHHHhhhhCC
Q psy359          337 HFPLRPYACTQCDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       337 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  367 (405)
                      |++++||+|.+|++.|.....|..|+++|.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            3455555555555555555555555555543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.92  E-value=3e-10  Score=60.00  Aligned_cols=29  Identities=28%  Similarity=0.817  Sum_probs=17.1

Q ss_pred             CcccCCccccccCChHHHHHHHHhhcccc
Q psy359          369 KPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      +||+|++|++.|.+.+.|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            35566666666666666666666665553

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.92  E-value=2.3e-10  Score=60.43  Aligned_cols=29  Identities=45%  Similarity=1.022  Sum_probs=27.6

Q ss_pred             CccccccccccccCchhHHHHhhhhCCCC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      +||+|++|+++|...+.|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.92  E-value=2.7e-10  Score=59.32  Aligned_cols=28  Identities=43%  Similarity=0.873  Sum_probs=17.6

Q ss_pred             CCcccCCccccccCChHHHHHHHHhhcc
Q psy359          368 EKPYQCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       368 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      ++||+|++|++.|.+.+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4566666666666666666666666654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.91  E-value=3e-10  Score=62.72  Aligned_cols=32  Identities=22%  Similarity=0.645  Sum_probs=29.7

Q ss_pred             hCCCCcccCCccccccCChHHHHHHHHhhccc
Q psy359          365 HTGEKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       365 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      |+|++||+|.+|++.|.+.++|..|+++|...
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            78999999999999999999999999997654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=2.1e-10  Score=59.77  Aligned_cols=28  Identities=46%  Similarity=1.026  Sum_probs=26.7

Q ss_pred             CCccccccccccccCchhHHHHhhhhCC
Q psy359          340 LRPYACTQCDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       340 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  367 (405)
                      ||||+|++|+++|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=5.6e-10  Score=58.80  Aligned_cols=29  Identities=28%  Similarity=0.642  Sum_probs=17.7

Q ss_pred             CcccCCccccccCChHHHHHHHHhhcccc
Q psy359          369 KPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      +||.|++|++.|.+.+.|..|+++|.|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            35666666666666666666666666553

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=5.2e-10  Score=58.90  Aligned_cols=29  Identities=34%  Similarity=0.886  Sum_probs=27.5

Q ss_pred             CccccccccccccCchhHHHHhhhhCCCC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      +||.|++|+++|...+.|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58999999999999999999999999975

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.86  E-value=1.6e-10  Score=69.02  Aligned_cols=39  Identities=23%  Similarity=0.619  Sum_probs=23.0

Q ss_pred             HHhhhhhcCCCCcccccc--ccccccCchhHHHHhhhhCCCC
Q psy359          330 LLQHKRLHFPLRPYACTQ--CDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       330 l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      +..|+. |++++||+|.+  |++.|...+.|..|+++|.|++
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            334443 66666666655  6666666666666666666553

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.83  E-value=1.7e-10  Score=68.86  Aligned_cols=42  Identities=14%  Similarity=0.452  Sum_probs=37.3

Q ss_pred             chhHHHHhhhhCCCCcccCCc--cccccCChHHHHHHHHhhcccc
Q psy359          355 KNHLTTHYRIHTGEKPYQCDI--CGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       355 ~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      ...|..|+. |.+++||+|.+  |++.|...++|..|+++|.|++
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            345677775 99999999988  9999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=8.6e-10  Score=61.44  Aligned_cols=26  Identities=19%  Similarity=0.426  Sum_probs=13.4

Q ss_pred             cccccCChHHHHHHHHhhcccccccc
Q psy359          376 CGRGFAQSNDMKKHRRTVHKAQIHAV  401 (405)
Q Consensus       376 C~~~f~~~~~l~~H~~~~h~~~~~~~  401 (405)
                      |++.|.+...|..|+++|.|++||.|
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeC
Confidence            55555555555555555555555554

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=2e-09  Score=54.45  Aligned_cols=25  Identities=40%  Similarity=0.933  Sum_probs=15.6

Q ss_pred             CcccCCccccccCChHHHHHHHHhh
Q psy359          369 KPYQCDICGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H~~~~  393 (405)
                      +||+|..|||.|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            4566666666666666666666655

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=2.1e-09  Score=59.81  Aligned_cols=33  Identities=33%  Similarity=0.971  Sum_probs=31.2

Q ss_pred             ccccc--ccccccCchhHHHHhhhhCCCCcccCCc
Q psy359          343 YACTQ--CDKTFKKKNHLTTHYRIHTGEKPYQCDI  375 (405)
Q Consensus       343 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~  375 (405)
                      |.|+.  |+++|...+.|..|+++|.|++||+|.+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78987  9999999999999999999999999974

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.4e-09  Score=55.05  Aligned_cols=26  Identities=46%  Similarity=1.016  Sum_probs=24.6

Q ss_pred             CccccccccccccCchhHHHHhhhhC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHT  366 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~  366 (405)
                      |||+|.+||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999984

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.3e-08  Score=53.72  Aligned_cols=28  Identities=25%  Similarity=0.686  Sum_probs=15.8

Q ss_pred             CcccCCc--cccccCChHHHHHHHHhhccc
Q psy359          369 KPYQCDI--CGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       369 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      +||.|.+  |++.|.+.+.|+.|+++|.|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            3555555  555555555555555555553

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=9.8e-09  Score=54.25  Aligned_cols=28  Identities=46%  Similarity=0.917  Sum_probs=26.5

Q ss_pred             Ccccccc--ccccccCchhHHHHhhhhCCC
Q psy359          341 RPYACTQ--CDKTFKKKNHLTTHYRIHTGE  368 (405)
Q Consensus       341 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  368 (405)
                      |||.|++  |+++|...+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899999  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.5e-08  Score=53.69  Aligned_cols=28  Identities=32%  Similarity=0.797  Sum_probs=17.1

Q ss_pred             CcccCCc--cccccCChHHHHHHHHhhccc
Q psy359          369 KPYQCDI--CGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       369 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      +||.|++  |++.|.+.+.|..|+++|.|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            3566655  666666666666666666553

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1.2e-08  Score=54.02  Aligned_cols=28  Identities=50%  Similarity=0.981  Sum_probs=26.3

Q ss_pred             Ccccccc--ccccccCchhHHHHhhhhCCC
Q psy359          341 RPYACTQ--CDKTFKKKNHLTTHYRIHTGE  368 (405)
Q Consensus       341 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  368 (405)
                      |||.|++  |+++|...+.|..|++.|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899988  999999999999999999985

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=2.6e-08  Score=53.18  Aligned_cols=27  Identities=33%  Similarity=0.962  Sum_probs=13.2

Q ss_pred             cccCC--ccccccCChHHHHHHHHhhccc
Q psy359          370 PYQCD--ICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       370 ~~~C~--~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ||.|+  .|++.|.+.++|..|+++|.|+
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            44453  2555555555555555555444

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=2.8e-08  Score=53.09  Aligned_cols=29  Identities=52%  Similarity=1.020  Sum_probs=26.8

Q ss_pred             Ccccccc--ccccccCchhHHHHhhhhCCCC
Q psy359          341 RPYACTQ--CDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       341 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      +||.|++  |+++|+..+.|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6899964  9999999999999999999985

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.35  E-value=1.4e-07  Score=50.51  Aligned_cols=26  Identities=42%  Similarity=1.003  Sum_probs=12.9

Q ss_pred             Ccccccc--ccccccCchhHHHHhhhhC
Q psy359          341 RPYACTQ--CDKTFKKKNHLTTHYRIHT  366 (405)
Q Consensus       341 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  366 (405)
                      +||.|++  |++.|...+.|..|+++|.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            4455544  5555555555555554444

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.35  E-value=8.5e-08  Score=50.07  Aligned_cols=27  Identities=37%  Similarity=0.903  Sum_probs=15.2

Q ss_pred             CcccCCc--cccccCChHHHHHHHHhhcc
Q psy359          369 KPYQCDI--CGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       369 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  395 (405)
                      +||.|.+  |++.|.+.+.|..|+++|.|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3555555  55666666666666555543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.34  E-value=1.5e-07  Score=50.45  Aligned_cols=29  Identities=28%  Similarity=0.936  Sum_probs=26.7

Q ss_pred             CCcccCCc--cccccCChHHHHHHHHhhccc
Q psy359          368 EKPYQCDI--CGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       368 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ++||.|.+  |++.|++..+|..|+++|.+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999998  999999999999999998764

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.32  E-value=7.7e-08  Score=50.23  Aligned_cols=27  Identities=59%  Similarity=1.192  Sum_probs=25.3

Q ss_pred             Ccccccc--ccccccCchhHHHHhhhhCC
Q psy359          341 RPYACTQ--CDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       341 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  367 (405)
                      |||+|++  |+++|...+.|..|++.|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899988  99999999999999999976

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=1.5e-07  Score=48.48  Aligned_cols=25  Identities=44%  Similarity=0.891  Sum_probs=14.4

Q ss_pred             CcccCCc--cccccCChHHHHHHHHhh
Q psy359          369 KPYQCDI--CGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       369 ~~~~C~~--C~~~f~~~~~l~~H~~~~  393 (405)
                      +||.|++  |+|.|.+..+|..|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            3555555  666666666666665554

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=2.6e-07  Score=47.59  Aligned_cols=26  Identities=38%  Similarity=0.907  Sum_probs=24.3

Q ss_pred             Ccccccc--ccccccCchhHHHHhhhhC
Q psy359          341 RPYACTQ--CDKTFKKKNHLTTHYRIHT  366 (405)
Q Consensus       341 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  366 (405)
                      +||.|++  |+++|+..+.|..|++.|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899998  9999999999999999985

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=4.9e-07  Score=42.94  Aligned_cols=24  Identities=29%  Similarity=0.834  Sum_probs=13.1

Q ss_pred             ccCCccccccCChHHHHHHHHhhc
Q psy359          371 YQCDICGRGFAQSNDMKKHRRTVH  394 (405)
Q Consensus       371 ~~C~~C~~~f~~~~~l~~H~~~~h  394 (405)
                      ++|.+|++.|.....|..|++.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            455555555555555555555544

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=8.9e-07  Score=45.33  Aligned_cols=29  Identities=48%  Similarity=0.903  Sum_probs=22.6

Q ss_pred             cccccccccccCchhHHHHhhhhCCCCcc
Q psy359          343 YACTQCDKTFKKKNHLTTHYRIHTGEKPY  371 (405)
Q Consensus       343 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  371 (405)
                      .-|..||++|...+.|..|...|.+++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            56777888888888888887778777776

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.1e-06  Score=41.73  Aligned_cols=26  Identities=50%  Similarity=0.975  Sum_probs=24.0

Q ss_pred             ccccccccccccCchhHHHHhhhhCC
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~h~~  367 (405)
                      |.+|..|++.|..+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46899999999999999999999975

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.3e-06  Score=43.68  Aligned_cols=27  Identities=37%  Similarity=0.970  Sum_probs=21.4

Q ss_pred             CcccCCc--cccccCChHHHHHHHHhhcc
Q psy359          369 KPYQCDI--CGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       369 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  395 (405)
                      +||.|.+  |+++++.+++|++|++++||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4677777  88888888888888888775

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.1e-06  Score=42.84  Aligned_cols=27  Identities=41%  Similarity=0.855  Sum_probs=14.9

Q ss_pred             CccccccccccccCchhHHHHhhhhCC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  367 (405)
                      +||+|..|..+-.+.+.|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            455555555555555555555555554

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=1.7e-06  Score=42.15  Aligned_cols=29  Identities=28%  Similarity=0.624  Sum_probs=27.2

Q ss_pred             CCcccCCccccccCChHHHHHHHHhhccc
Q psy359          368 EKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       368 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ++||+|.+|++.-.+.+.|.-|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999885

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=1.8e-06  Score=43.14  Aligned_cols=27  Identities=41%  Similarity=0.990  Sum_probs=16.1

Q ss_pred             CccccccccccccCchhHHHHhhhhCC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  367 (405)
                      +||.|++|+..|..+..+.-|.+.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            556666666666666666666665544

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=4.1e-06  Score=42.85  Aligned_cols=32  Identities=41%  Similarity=0.920  Sum_probs=29.1

Q ss_pred             CCccCccchhccCChHHHHHHHhhhcCCCCcc
Q psy359          187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYA  218 (405)
Q Consensus       187 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  218 (405)
                      +...|..||+.|.....|.+|..+|++++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            45789999999999999999999999999983

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=5.2e-06  Score=40.85  Aligned_cols=28  Identities=25%  Similarity=0.717  Sum_probs=25.0

Q ss_pred             CcccCCccccccCChHHHHHHHHhhccc
Q psy359          369 KPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      +||+|++|+..-.++++|..|++..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            5899999999999999999999998886

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.82  E-value=4.6e-06  Score=41.04  Aligned_cols=25  Identities=32%  Similarity=0.910  Sum_probs=12.3

Q ss_pred             CccccccccccccCchhHHHHhhhh
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIH  365 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h  365 (405)
                      +||.|.+||+.|+.......|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4455555555555554444444444

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.81  E-value=5.2e-06  Score=40.84  Aligned_cols=27  Identities=52%  Similarity=1.078  Sum_probs=24.8

Q ss_pred             CCcccCCccccccCChHHHHHHHHhhc
Q psy359          368 EKPYQCDICGRGFAQSNDMKKHRRTVH  394 (405)
Q Consensus       368 ~~~~~C~~C~~~f~~~~~l~~H~~~~h  394 (405)
                      ++||.|.+||+.|..+.....|.+.|-
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999988863

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=8.8e-06  Score=40.56  Aligned_cols=29  Identities=38%  Similarity=0.830  Sum_probs=27.0

Q ss_pred             CCcccCCccccccCChHHHHHHHHhhccc
Q psy359          368 EKPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       368 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ++||.|++|...|....-+..|+++|-|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999998775

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.1e-05  Score=39.61  Aligned_cols=26  Identities=38%  Similarity=0.677  Sum_probs=16.1

Q ss_pred             cccccccccccCchhHHHHhhhhCCC
Q psy359          343 YACTQCDKTFKKKNHLTTHYRIHTGE  368 (405)
Q Consensus       343 ~~C~~C~~~f~~~~~l~~H~~~h~~~  368 (405)
                      |.|++|+......+-|..|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            55666666666666666666666654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=8.7e-06  Score=39.43  Aligned_cols=26  Identities=27%  Similarity=0.630  Sum_probs=16.2

Q ss_pred             ccCCccccccCChHHHHHHHHhhccc
Q psy359          371 YQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       371 ~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      +.|..||+.|...+.|.+|+..|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            45666666666666666666666553

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=2e-05  Score=38.81  Aligned_cols=28  Identities=39%  Similarity=0.675  Sum_probs=24.9

Q ss_pred             CcccCCccccccCChHHHHHHHHhhccc
Q psy359          369 KPYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      +||+|.+|.......++|..|+++.|+.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            5899999999999999999999998875

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=1.7e-05  Score=39.62  Aligned_cols=27  Identities=30%  Similarity=0.786  Sum_probs=24.6

Q ss_pred             Ccccccc--ccccccCchhHHHHhhhhCC
Q psy359          341 RPYACTQ--CDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       341 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  367 (405)
                      +||.|.+  |++.|+..++|+.|++.+||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5799988  99999999999999998775

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=3.2e-05  Score=37.88  Aligned_cols=28  Identities=32%  Similarity=0.577  Sum_probs=25.7

Q ss_pred             cccCCccccccCChHHHHHHHHhhcccc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      .|.|+.|+....-++-|++|+++|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            3889999999999999999999998864

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.54  E-value=1.9e-05  Score=36.93  Aligned_cols=23  Identities=30%  Similarity=0.938  Sum_probs=19.1

Q ss_pred             ccCCccccccCChHHHHHHHHhh
Q psy359          371 YQCDICGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       371 ~~C~~C~~~f~~~~~l~~H~~~~  393 (405)
                      |+|.+|.++|...+.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            67888888888888888888775

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.51  E-value=2.9e-05  Score=36.99  Aligned_cols=26  Identities=50%  Similarity=0.828  Sum_probs=19.4

Q ss_pred             ccccccccccCchhHHHHhhhhCCCC
Q psy359          344 ACTQCDKTFKKKNHLTTHYRIHTGEK  369 (405)
Q Consensus       344 ~C~~C~~~f~~~~~l~~H~~~h~~~~  369 (405)
                      +|+.|.+.|.+++-|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57777777777777777777777764

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=3.4e-05  Score=37.20  Aligned_cols=26  Identities=38%  Similarity=0.889  Sum_probs=18.0

Q ss_pred             CccccccccccccCchhHHHHhhhhC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHT  366 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~  366 (405)
                      +||+|..|..+....+.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            56777777777777777777777664

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=4e-05  Score=37.06  Aligned_cols=26  Identities=38%  Similarity=0.807  Sum_probs=22.9

Q ss_pred             cccccccccccCchhHHHHhhhhCCC
Q psy359          343 YACTQCDKTFKKKNHLTTHYRIHTGE  368 (405)
Q Consensus       343 ~~C~~C~~~f~~~~~l~~H~~~h~~~  368 (405)
                      ..|..||++|...+.|..|...|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            57899999999999999999998875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=4.7e-05  Score=37.27  Aligned_cols=24  Identities=29%  Similarity=0.815  Sum_probs=19.1

Q ss_pred             cccCCccccccCChHHHHHHHHhh
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~  393 (405)
                      ||.|..|..+|.+..+|..|+++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            577888888888888888888764

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.00011  Score=39.84  Aligned_cols=25  Identities=36%  Similarity=0.938  Sum_probs=15.0

Q ss_pred             CCCcccCCccccccCChHHHHHHHH
Q psy359          367 GEKPYQCDICGRGFAQSNDMKKHRR  391 (405)
Q Consensus       367 ~~~~~~C~~C~~~f~~~~~l~~H~~  391 (405)
                      |.+||+|.+|+|.|....++.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            4556666666666666666666543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=6.7e-05  Score=40.64  Aligned_cols=26  Identities=27%  Similarity=0.698  Sum_probs=23.6

Q ss_pred             CCCCccccccccccccCchhHHHHhh
Q psy359          338 FPLRPYACTQCDKTFKKKNHLTTHYR  363 (405)
Q Consensus       338 ~~~~~~~C~~C~~~f~~~~~l~~H~~  363 (405)
                      ++.+||.|..|++.|.....|..|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            47799999999999999999999964

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.15  E-value=0.00015  Score=33.89  Aligned_cols=23  Identities=35%  Similarity=0.876  Sum_probs=17.7

Q ss_pred             cccCCccccccCChHHHHHHHHh
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRT  392 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~  392 (405)
                      ||+|+-|+..|.+...|+.|+..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            67788888888888888887754

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.11  E-value=0.00022  Score=33.86  Aligned_cols=26  Identities=23%  Similarity=0.501  Sum_probs=24.6

Q ss_pred             cCCccccccCChHHHHHHHHhhcccc
Q psy359          372 QCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       372 ~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      +|+.|.+.|.+...|.-|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            79999999999999999999999875

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.11  E-value=0.00013  Score=36.68  Aligned_cols=28  Identities=25%  Similarity=0.688  Sum_probs=25.8

Q ss_pred             ceecCCCcccCCChHHHHHHHhhhccCC
Q psy359          279 IFKCDLCGNILSSKHILQEHVRVVHMGL  306 (405)
Q Consensus       279 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  306 (405)
                      ||.|.+|++.|..+..|.+|+...|.+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            6899999999999999999999888764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=8.6e-05  Score=36.32  Aligned_cols=23  Identities=48%  Similarity=0.973  Sum_probs=21.7

Q ss_pred             ccccccccccccCchhHHHHhhh
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRI  364 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~  364 (405)
                      ||.|..|.++|.++..|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68999999999999999999975

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.07  E-value=0.00016  Score=39.05  Aligned_cols=28  Identities=29%  Similarity=0.789  Sum_probs=16.2

Q ss_pred             CccccccccccccCchhHHHHhhhhCCC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTGE  368 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  368 (405)
                      +.|+|.+|++.|.+..+|-=||+.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            3456666666666666666666555443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.06  E-value=0.00018  Score=33.59  Aligned_cols=24  Identities=42%  Similarity=0.858  Sum_probs=19.1

Q ss_pred             ccCccchhccCChHHHHHHHhhhc
Q psy359          189 FPCTFCEKSFKRKLHLKVHTRTHT  212 (405)
Q Consensus       189 ~~C~~C~~~f~~~~~l~~H~~~h~  212 (405)
                      |+|..|.+.|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            678888888888888888887763

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.03  E-value=0.0002  Score=34.92  Aligned_cols=27  Identities=37%  Similarity=0.839  Sum_probs=17.5

Q ss_pred             ccccccccccccCchhHHHHhhhhCCC
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRIHTGE  368 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  368 (405)
                      .|.|..|...|.....|+.||..|.|+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            366666666666666666666666653

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00014  Score=36.59  Aligned_cols=26  Identities=35%  Similarity=0.884  Sum_probs=17.5

Q ss_pred             Ccccccc--ccccccCchhHHHHh-hhhC
Q psy359          341 RPYACTQ--CDKTFKKKNHLTTHY-RIHT  366 (405)
Q Consensus       341 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~  366 (405)
                      +||.|.+  |.|+|.+.+....|+ +.|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            4677766  777777777777776 4554

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00021  Score=35.01  Aligned_cols=27  Identities=30%  Similarity=0.718  Sum_probs=23.6

Q ss_pred             CccccccccccccCchhHHHHhhhhCC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  367 (405)
                      +||+|.+|.+.....+.|..|++.-|+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            589999999999999999999876544

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.88  E-value=0.00039  Score=37.54  Aligned_cols=30  Identities=20%  Similarity=0.595  Sum_probs=27.0

Q ss_pred             CCcccCCccccccCChHHHHHHHHhhcccc
Q psy359          368 EKPYQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       368 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      .+.|+|.+|++.|.+...|-=|+..|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            467999999999999999999999987765

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.87  E-value=0.00036  Score=33.99  Aligned_cols=26  Identities=27%  Similarity=0.738  Sum_probs=24.5

Q ss_pred             ccccCCCccccCChhhHHHHHHhhcC
Q psy359          128 TYPCDQCDRTYQTKKSLYVHRRAHLG  153 (405)
Q Consensus       128 ~~~C~~C~~~f~~~~~l~~H~~~h~~  153 (405)
                      .|.|..|...|..+-.|+.||..|.+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            48999999999999999999999987

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00037  Score=33.51  Aligned_cols=26  Identities=38%  Similarity=0.755  Sum_probs=24.3

Q ss_pred             CcccCCccccccCChHHHHHHHHhhc
Q psy359          369 KPYQCDICGRGFAQSNDMKKHRRTVH  394 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H~~~~h  394 (405)
                      +||+|..|.+.-...++|.+|++.|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999863

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00039  Score=34.10  Aligned_cols=28  Identities=21%  Similarity=0.552  Sum_probs=24.2

Q ss_pred             CccccccccccccCchhHHHHhhhhCCC
Q psy359          341 RPYACTQCDKTFKKKNHLTTHYRIHTGE  368 (405)
Q Consensus       341 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  368 (405)
                      +||+|.+|....+..+.|..|++.-|+.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            5899999999999999999999865543

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.79  E-value=0.00039  Score=34.95  Aligned_cols=27  Identities=30%  Similarity=0.912  Sum_probs=15.6

Q ss_pred             cccCCccccccCChHHHHHHHHhhccc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ||.|.+|++.|.....|-+|...-|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            455666666666666666665554443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.67  E-value=0.00039  Score=33.82  Aligned_cols=24  Identities=42%  Similarity=1.003  Sum_probs=14.5

Q ss_pred             cccccc--ccccccCchhHHHHhhhh
Q psy359          342 PYACTQ--CDKTFKKKNHLTTHYRIH  365 (405)
Q Consensus       342 ~~~C~~--C~~~f~~~~~l~~H~~~h  365 (405)
                      ||+|+.  |++.|...+.|..|.+.|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            566655  666666666666665554

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.55  E-value=0.00079  Score=32.88  Aligned_cols=27  Identities=26%  Similarity=0.709  Sum_probs=16.8

Q ss_pred             cccCCc--cccccCChHHHHHHHHhhccc
Q psy359          370 PYQCDI--CGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       370 ~~~C~~--C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      ||.|..  |.|.|.+.-.|.+|..+|.|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            455544  666666666666666666653

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.53  E-value=0.00085  Score=32.62  Aligned_cols=25  Identities=28%  Similarity=0.802  Sum_probs=22.6

Q ss_pred             CcccCCc--cccccCChHHHHHHHHhh
Q psy359          369 KPYQCDI--CGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       369 ~~~~C~~--C~~~f~~~~~l~~H~~~~  393 (405)
                      .||+|+.  |++.|..++.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4789986  999999999999999886

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.00095  Score=35.62  Aligned_cols=27  Identities=33%  Similarity=0.821  Sum_probs=18.3

Q ss_pred             CCCcccccc--ccccccCchhHHHHhhhh
Q psy359          339 PLRPYACTQ--CDKTFKKKNHLTTHYRIH  365 (405)
Q Consensus       339 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h  365 (405)
                      ++|||.|+.  |+..|.+...|..|...|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            356777743  777777777777776655

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.00065  Score=34.10  Aligned_cols=26  Identities=42%  Similarity=0.945  Sum_probs=22.8

Q ss_pred             CcccCCc--cccccCChHHHHHHH-Hhhc
Q psy359          369 KPYQCDI--CGRGFAQSNDMKKHR-RTVH  394 (405)
Q Consensus       369 ~~~~C~~--C~~~f~~~~~l~~H~-~~~h  394 (405)
                      +||.|.+  |.|.|++++.-.+|+ ++|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            5899999  999999999999997 6653

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.17  E-value=0.0017  Score=31.04  Aligned_cols=22  Identities=23%  Similarity=0.865  Sum_probs=17.4

Q ss_pred             cccCCccccccCChHHHHHHHH
Q psy359          370 PYQCDICGRGFAQSNDMKKHRR  391 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~  391 (405)
                      ||+|+.||+.+-...+|.+|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5788888888888888888753

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.12  E-value=0.0015  Score=31.89  Aligned_cols=28  Identities=46%  Similarity=0.998  Sum_probs=24.9

Q ss_pred             Ccccccc--ccccccCchhHHHHhhhhCCC
Q psy359          341 RPYACTQ--CDKTFKKKNHLTTHYRIHTGE  368 (405)
Q Consensus       341 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  368 (405)
                      +||.|.+  |.+.|.+.-.|..|...|.|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5788877  999999999999999998875

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0019  Score=36.24  Aligned_cols=24  Identities=25%  Similarity=0.736  Sum_probs=20.1

Q ss_pred             cccCCccccccCChHHHHHHHHhh
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~  393 (405)
                      .|.|.+|+|.|+.+..|++|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            478899999999999999987764

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.05  E-value=0.0017  Score=30.99  Aligned_cols=23  Identities=30%  Similarity=0.765  Sum_probs=20.6

Q ss_pred             ccccccccccccCchhHHHHhhh
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRI  364 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~  364 (405)
                      ||+|+.||+.|..+..|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68999999999999999999654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.02  E-value=0.0026  Score=29.54  Aligned_cols=23  Identities=30%  Similarity=0.678  Sum_probs=21.3

Q ss_pred             ccccCCCccccCChhhHHHHHHh
Q psy359          128 TYPCDQCDRTYQTKKSLYVHRRA  150 (405)
Q Consensus       128 ~~~C~~C~~~f~~~~~l~~H~~~  150 (405)
                      +|+|..|...|..+..|+.||..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            68999999999999999999864

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.61  E-value=0.0041  Score=28.99  Aligned_cols=24  Identities=25%  Similarity=0.735  Sum_probs=22.2

Q ss_pred             eecCCCcccCCChHHHHHHHhhhc
Q psy359          280 FKCDLCGNILSSKHILQEHVRVVH  303 (405)
Q Consensus       280 ~~C~~C~~~f~~~~~l~~H~~~~h  303 (405)
                      |.|+.|-+.|..+.++..|.++.|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            889999999999999999998765

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.48  E-value=0.0054  Score=28.60  Aligned_cols=24  Identities=29%  Similarity=0.839  Sum_probs=18.2

Q ss_pred             ccCCccccccCChHHHHHHHHhhc
Q psy359          371 YQCDICGRGFAQSNDMKKHRRTVH  394 (405)
Q Consensus       371 ~~C~~C~~~f~~~~~l~~H~~~~h  394 (405)
                      |.|++|-+-|+...++..|.+.-|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            677888888888888877777655

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.37  E-value=0.0057  Score=29.39  Aligned_cols=24  Identities=21%  Similarity=0.530  Sum_probs=15.6

Q ss_pred             cccCCccccccCChHHHHHHHHhh
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~  393 (405)
                      |-+|+.|+++..++..|+-|.+.|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            345666777777777777666655

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.33  E-value=0.0071  Score=32.18  Aligned_cols=28  Identities=25%  Similarity=0.733  Sum_probs=24.2

Q ss_pred             CCCcccC--CccccccCChHHHHHHHHhhc
Q psy359          367 GEKPYQC--DICGRGFAQSNDMKKHRRTVH  394 (405)
Q Consensus       367 ~~~~~~C--~~C~~~f~~~~~l~~H~~~~h  394 (405)
                      +++||.|  +-|+..|.+...|.-|...|-
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            5899999  569999999999999977653

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.0043  Score=34.72  Aligned_cols=26  Identities=31%  Similarity=0.502  Sum_probs=23.7

Q ss_pred             ccccccccccccCchhHHHHhhhhCC
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~h~~  367 (405)
                      .|.|..|+|.|+....|+.|...|.-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            48999999999999999999998863

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.79  E-value=0.013  Score=29.67  Aligned_cols=20  Identities=25%  Similarity=0.725  Sum_probs=14.4

Q ss_pred             cccCCccccccCChHHHHHH
Q psy359          370 PYQCDICGRGFAQSNDMKKH  389 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H  389 (405)
                      .|-|+.||-.|.+.+.|..|
T Consensus         8 rf~c~pcgirfss~stleah   27 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAH   27 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHH
T ss_pred             ceeccccceeecChhHHHhh
Confidence            36677777777777777777

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.57  E-value=0.015  Score=29.39  Aligned_cols=23  Identities=35%  Similarity=0.527  Sum_probs=21.0

Q ss_pred             cceecCCCcccCCChHHHHHHHh
Q psy359          278 LIFKCDLCGNILSSKHILQEHVR  300 (405)
Q Consensus       278 ~~~~C~~C~~~f~~~~~l~~H~~  300 (405)
                      ..|.|..||..|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            35899999999999999999987

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.011  Score=28.32  Aligned_cols=23  Identities=30%  Similarity=0.781  Sum_probs=17.4

Q ss_pred             cccccccccccCchhHHHHhhhh
Q psy359          343 YACTQCDKTFKKKNHLTTHYRIH  365 (405)
Q Consensus       343 ~~C~~C~~~f~~~~~l~~H~~~h  365 (405)
                      |+|+.|+.....++.|..|++.-
T Consensus         3 ~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHT
T ss_pred             ccCCcchhheeehhhhhHHhhhc
Confidence            67888888888888888887643

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.18  E-value=0.017  Score=27.73  Aligned_cols=26  Identities=35%  Similarity=0.663  Sum_probs=22.4

Q ss_pred             ccccccccccccCchhHHHHhhhhCC
Q psy359          342 PYACTQCDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       342 ~~~C~~C~~~f~~~~~l~~H~~~h~~  367 (405)
                      |-+|+.|.....++-.|+.|.++|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            45899999999999999999998853

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.45  E-value=0.016  Score=30.14  Aligned_cols=24  Identities=42%  Similarity=0.690  Sum_probs=17.8

Q ss_pred             cccccccccCchhHHHHhhhhCCC
Q psy359          345 CTQCDKTFKKKNHLTTHYRIHTGE  368 (405)
Q Consensus       345 C~~C~~~f~~~~~l~~H~~~h~~~  368 (405)
                      |+.=++.|...+.|..||+.|+|+
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444456688888888888888775

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.45  E-value=0.031  Score=26.67  Aligned_cols=26  Identities=27%  Similarity=0.593  Sum_probs=23.5

Q ss_pred             cccCCccccccCChHHHHHHHHhhcc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      .|+|+.|.-....++.|+-|++.-|.
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            48999999999999999999998664

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.89  E-value=0.047  Score=26.47  Aligned_cols=25  Identities=16%  Similarity=0.501  Sum_probs=22.7

Q ss_pred             cccCCCccccCChhhHHHHHHhhcC
Q psy359          129 YPCDQCDRTYQTKKSLYVHRRAHLG  153 (405)
Q Consensus       129 ~~C~~C~~~f~~~~~l~~H~~~h~~  153 (405)
                      |.|..|++...+...++-|....|+
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            8999999999999999999887665

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.89  E-value=0.037  Score=28.22  Aligned_cols=26  Identities=27%  Similarity=0.724  Sum_probs=16.3

Q ss_pred             cccCCccccccCChHHHHHHHHhhcc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVHK  395 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h~  395 (405)
                      .|.|+.|+|.|+....+.+|-..-.|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            46677777777776666666554433

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.98  E-value=0.069  Score=27.18  Aligned_cols=26  Identities=19%  Similarity=0.662  Sum_probs=23.1

Q ss_pred             ccccCCCccccCChhhHHHHHHhhcC
Q psy359          128 TYPCDQCDRTYQTKKSLYVHRRAHLG  153 (405)
Q Consensus       128 ~~~C~~C~~~f~~~~~l~~H~~~h~~  153 (405)
                      .|.|..|+++|..+..+.+|.-.-.+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48999999999999999999877665

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.56  E-value=0.11  Score=25.18  Aligned_cols=27  Identities=26%  Similarity=0.572  Sum_probs=18.5

Q ss_pred             ccCCccccccCChHHHHHHHHhhcccc
Q psy359          371 YQCDICGRGFAQSNDMKKHRRTVHKAQ  397 (405)
Q Consensus       371 ~~C~~C~~~f~~~~~l~~H~~~~h~~~  397 (405)
                      |.|..|++...+..-+..|+..-|...
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn~~   29 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHNSL   29 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             eechhHHHHHhhccCceEEEeecccCC
Confidence            567777777777777777776666543

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.20  E-value=0.055  Score=26.73  Aligned_cols=20  Identities=35%  Similarity=0.702  Sum_probs=12.0

Q ss_pred             ccccccCchhHHHHhhhhCC
Q psy359          348 CDKTFKKKNHLTTHYRIHTG  367 (405)
Q Consensus       348 C~~~f~~~~~l~~H~~~h~~  367 (405)
                      |+..|.....|..|+-.|+|
T Consensus        11 C~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHC
T ss_pred             cchhhccchhhhHHhhhhcC
Confidence            66666666666666655554

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.99  E-value=0.056  Score=33.60  Aligned_cols=26  Identities=23%  Similarity=0.275  Sum_probs=22.9

Q ss_pred             cCcccccCCCccccCChhhHHHHHHh
Q psy359          125 LPLTYPCDQCDRTYQTKKSLYVHRRA  150 (405)
Q Consensus       125 ~~~~~~C~~C~~~f~~~~~l~~H~~~  150 (405)
                      +...|.|..|++.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            44569999999999999999999875

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.88  E-value=0.1  Score=25.69  Aligned_cols=28  Identities=21%  Similarity=0.566  Sum_probs=24.5

Q ss_pred             CcccCCc--cccccCChHHHHHHHHhhccc
Q psy359          369 KPYQCDI--CGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       369 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      +.|.|++  |+-.|+-...|+.|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4577876  999999999999999999875

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.12  E-value=0.091  Score=27.19  Aligned_cols=24  Identities=21%  Similarity=0.173  Sum_probs=20.8

Q ss_pred             CCccccccCChHHHHHHHHhhccc
Q psy359          373 CDICGRGFAQSNDMKKHRRTVHKA  396 (405)
Q Consensus       373 C~~C~~~f~~~~~l~~H~~~~h~~  396 (405)
                      |+.=++.|.....|..|+++|+|+
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            555567899999999999999986

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.10  E-value=0.14  Score=28.29  Aligned_cols=32  Identities=31%  Similarity=0.524  Sum_probs=23.5

Q ss_pred             CCCcccCCccccccCChHHHHHHHHhhccccc
Q psy359          367 GEKPYQCDICGRGFAQSNDMKKHRRTVHKAQI  398 (405)
Q Consensus       367 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  398 (405)
                      .+.|-.|++|+-...++.+|+.|+..-|=.+|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            35677888888888888888888877665443

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.94  E-value=0.1  Score=26.68  Aligned_cols=26  Identities=27%  Similarity=0.741  Sum_probs=13.1

Q ss_pred             CcccCCccccccCChHHHHHHHHhhc
Q psy359          369 KPYQCDICGRGFAQSNDMKKHRRTVH  394 (405)
Q Consensus       369 ~~~~C~~C~~~f~~~~~l~~H~~~~h  394 (405)
                      ..|.|.+|.+.++.-+++-+|-.+.|
T Consensus         7 ~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           7 HTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            34555555555555555555544444

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.16  E-value=0.08  Score=32.23  Aligned_cols=37  Identities=16%  Similarity=0.482  Sum_probs=22.5

Q ss_pred             CCccccccccccccCchhHHHHhhhhCCCCcccCCccccc
Q psy359          340 LRPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRG  379 (405)
Q Consensus       340 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  379 (405)
                      ...|.|+.|++.|.....+..   .-.....|.|.+|+-.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCCE
Confidence            345777777777777665543   2233455777777643

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.14  E-value=0.12  Score=24.72  Aligned_cols=18  Identities=33%  Similarity=0.621  Sum_probs=13.0

Q ss_pred             cccccCChHHHHHHHHhh
Q psy359          376 CGRGFAQSNDMKKHRRTV  393 (405)
Q Consensus       376 C~~~f~~~~~l~~H~~~~  393 (405)
                      |+|.|...+.+++|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            777777777777777664

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.13  E-value=0.17  Score=25.81  Aligned_cols=29  Identities=14%  Similarity=0.430  Sum_probs=24.7

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhcc
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHM  304 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  304 (405)
                      +.-.|+|.+|.+++...+++-+|.-..|-
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            44579999999999999999999887663

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.11  E-value=0.067  Score=33.23  Aligned_cols=21  Identities=33%  Similarity=0.774  Sum_probs=12.0

Q ss_pred             cccccccccccCchhHHHHhh
Q psy359          343 YACTQCDKTFKKKNHLTTHYR  363 (405)
Q Consensus       343 ~~C~~C~~~f~~~~~l~~H~~  363 (405)
                      |.|..|++.|.+...|..|++
T Consensus        16 fYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTT
T ss_pred             EecccccCccCCHHHHHHHHc
Confidence            555555555555555555543

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.92  E-value=0.32  Score=22.87  Aligned_cols=18  Identities=50%  Similarity=0.811  Sum_probs=8.9

Q ss_pred             ccccccCchhHHHHhhhh
Q psy359          348 CDKTFKKKNHLTTHYRIH  365 (405)
Q Consensus       348 C~~~f~~~~~l~~H~~~h  365 (405)
                      |+++|..-..|..|+-.|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            555555555555554433

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=84.07  E-value=0.39  Score=26.52  Aligned_cols=30  Identities=17%  Similarity=0.459  Sum_probs=26.2

Q ss_pred             cccceecCCCcccCCChHHHHHHHhhhccC
Q psy359          276 RKLIFKCDLCGNILSSKHILQEHVRVVHMG  305 (405)
Q Consensus       276 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  305 (405)
                      .+.+-.|++|+.......+|.+|....|-.
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~   50 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSC
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence            466889999999999999999999877644

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.61  E-value=0.34  Score=28.94  Aligned_cols=25  Identities=20%  Similarity=0.565  Sum_probs=17.6

Q ss_pred             cccCCccccccCChHHHHHHHHhhc
Q psy359          370 PYQCDICGRGFAQSNDMKKHRRTVH  394 (405)
Q Consensus       370 ~~~C~~C~~~f~~~~~l~~H~~~~h  394 (405)
                      .|+|..|.-.|.+...|..|+..|-
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHhcc
Confidence            4777777777777777777776653

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.01  E-value=0.5  Score=22.66  Aligned_cols=19  Identities=32%  Similarity=0.754  Sum_probs=11.9

Q ss_pred             cccccCChHHHHHHHHhhc
Q psy359          376 CGRGFAQSNDMKKHRRTVH  394 (405)
Q Consensus       376 C~~~f~~~~~l~~H~~~~h  394 (405)
                      |++.|++...|..|.+..|
T Consensus         8 c~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TCCEESSHHHHHHHHHHGG
T ss_pred             chhhhccHHHHHhHHHHHH
Confidence            6666666666666665544

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.24  E-value=0.23  Score=30.14  Aligned_cols=20  Identities=25%  Similarity=0.599  Sum_probs=12.4

Q ss_pred             ccceecCCCcccCCChHHHH
Q psy359          277 KLIFKCDLCGNILSSKHILQ  296 (405)
Q Consensus       277 ~~~~~C~~C~~~f~~~~~l~  296 (405)
                      ...|+|+.|+++|+....+.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~   31 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQ   31 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHH
T ss_pred             CCceECCCCCCCcchhhHHH
Confidence            45577777777776655443

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.62  E-value=0.51  Score=28.16  Aligned_cols=28  Identities=32%  Similarity=0.739  Sum_probs=24.8

Q ss_pred             CCCccccccccccccCchhHHHHhhhhC
Q psy359          339 PLRPYACTQCDKTFKKKNHLTTHYRIHT  366 (405)
Q Consensus       339 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~  366 (405)
                      +...|+|..|.-.|.+...|..|+..|.
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhcc
Confidence            3456999999999999999999999985