Psyllid ID: psy3643

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
Protein Sequence
MRTGTYNVFMEYCTCMSKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASLPNMSPIF
Secondary Structure (PSIPRED)
cccccEEEEEEEEEEcccccccccccccHHcEEEEEcccccccEEEEcccccccccccccccccccccccccccccccccccccccEEEEEEEEccEEEEEEcccccccccccccccccccccccccEEEEEEEEcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEEEEcccccccccccHHcHHHHHHHHHHHHHHEEEEEEcccccccccccccccccccccccccccccccccccccEEEEEEEEEcccEEEEEEcEEcccccccccccccccccccccEEEEEEEEcccccccccccccccccc
Coil and Loop (DISEMBL)
MRTGTYNVFMEYCTcmskdgcntaslpnmspIFTVVISAVSCikcwncrsdsdpkcadpfdnssipindckvepelshlpgirATMCRKIRQKVHGEWRyyrgcawlgepgiggderycLMRTGTYNVFMEYCTcmskdgcntaslpnmspif
Flexible Loop (DISEMBL)
MRTGTYNVFMEYCTCMSKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKvepelshlpgiraTMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSkdgcntaslpnmspif
Low Complexity Region (SEG)
MRTGTYNVFMEYCTCMSKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASLPNMSPIF
Disordered region (IsUnstruct)
****TYNVFMEYCTCMSKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSD************SIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGC************
Disordered Region (DISOPRED)
***GTYNVFMEYCTCMSKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCK*EP******GI**TMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASL****PIF
Disordered Region (DISEMBL)
MRTGTYNVFMEYCTCMSKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASLPNMSPIF
Disordered Region (DISPRO)
**TGTYNVFMEYCTCMSKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTA*L*NM*P*F
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRTGTYNVFMEYCTCMSKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASLPNMSPIF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
157106474	288	hypothetical protein AaeL_AAEL004515 [Ae	0.921	0.489	0.644	2e-51
380010968	152	PREDICTED: uncharacterized protein LOC10	0.790	0.796	0.729	2e-47
66518456	152	PREDICTED: hypothetical protein LOC41024	0.718	0.723	0.783	2e-47
340719616	152	PREDICTED: hypothetical protein LOC10064	0.843	0.848	0.679	4e-47
125985987	151	GA14397 [Drosophila pseudoobscura pseudo	0.777	0.788	0.689	8e-47
332031542	148	hypothetical protein G5I_00123 [Acromyrm	0.738	0.763	0.722	2e-46
350400887	153	PREDICTED: hypothetical protein LOC10074	0.718	0.718	0.765	3e-46
307205585	152	hypothetical protein EAI_00430 [Harpegna	0.673	0.677	0.805	5e-46
195117920	151	GI17943 [Drosophila mojavensis] gi|19391	0.732	0.741	0.689	1e-45
195472341	151	GE18579 [Drosophila yakuba] gi|194174560	0.790	0.801	0.644	3e-45

>gi|157106474|ref|XP_001649340.1| hypothetical protein AaeL_AAEL004515 [Aedes aegypti] gi|108879860|gb|EAT44085.1| AAEL004515-PA [Aedes aegypti]

 Score =  207 bits (526), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 98/152 (64%), Positives = 120/152 (78%), Gaps = 11/152 (7%)

Query: 1   MRTGTYNVFMEYCTCMSKDGCNTASLPNMSPI-FTVVISAVSCI-------KCWNCRSDS 52
           MR+GTYN+FMEYCTC SKDGCN+A  P  +P  ++V I AV  I       KCW CRSD 
Sbjct: 104 MRSGTYNIFMEYCTCNSKDGCNSA--PQFTPTKWSVTIIAVLSIMLYLFGIKCWECRSDL 161

Query: 53  DPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYRGCAWLGEPGI 112
           DPKC+DPFDN S+P++DC     + HLP ++AT+CRK+RQKV+GEWRY R CA++GEPGI
Sbjct: 162 DPKCSDPFDNRSVPLSDCS-RKSMIHLPSVKATLCRKVRQKVNGEWRYIRSCAFIGEPGI 220

Query: 113 GGDERYCLMRTGTYNVFMEYCTCMSKDGCNTA 144
           GGDERYCLMR+GTYN+F+EYCTC SKDGCN+ 
Sbjct: 221 GGDERYCLMRSGTYNIFVEYCTCNSKDGCNSG 252

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380010968|ref|XP_003689587.1| PREDICTED: uncharacterized protein LOC100867187 isoform 1 [Apis florea]

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 89/122 (72%), Positives = 101/122 (82%), Gaps = 1/122 (0%)

Query: 32  IFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIR 91
            F+  I     IKCW CRSDSDPKCADPFDN+++PI DCK EP+L HLPG+R TMCRKIR
Sbjct: 15  FFSCCIQEGLSIKCWVCRSDSDPKCADPFDNTTVPITDCKQEPDLEHLPGVRPTMCRKIR 74

Query: 92  QKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASLPNMSP 151
           QKV+G WRY+R CA++GEPGIGGDER+CLMRTGTYN+FMEYCTC SKDGCNTAS  N   
Sbjct: 75  QKVNGVWRYFRSCAYMGEPGIGGDERFCLMRTGTYNIFMEYCTCNSKDGCNTASY-NHGS 133

Query: 152 IF 153
           IF
Sbjct: 134 IF 135

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66518456|ref|XP_393726.2| PREDICTED: hypothetical protein LOC410244 isoform 2 [Apis mellifera]

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 87/111 (78%), Positives = 98/111 (88%), Gaps = 1/111 (0%)

Query: 43  IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYR 102
           IKCW CRSDSDPKCADPFDN+++PI DCK EP+L HLPG+R TMCRKIRQKV+G WRY+R
Sbjct: 26  IKCWVCRSDSDPKCADPFDNTTVPITDCKQEPDLEHLPGVRPTMCRKIRQKVNGVWRYFR 85

Query: 103 GCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASLPNMSPIF 153
            CA++GEPGIGGDER+CLMRTGTYN+FMEYCTC SKDGCNTAS  N   IF
Sbjct: 86  SCAYMGEPGIGGDERFCLMRTGTYNIFMEYCTCNSKDGCNTASY-NHGSIF 135

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340719616|ref|XP_003398245.1| PREDICTED: hypothetical protein LOC100643051 [Bombus terrestris]

 Score =  192 bits (488), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 89/131 (67%), Positives = 103/131 (78%), Gaps = 2/131 (1%)

Query: 22  NTASLPNMSPIFTVV--ISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHL 79
           N  S P +  +  V   I    CIKCW CRSDSDPKCADPFDN+++PI DCK EP+L HL
Sbjct: 3   NETSFPILLIVLFVFCCIQQGLCIKCWVCRSDSDPKCADPFDNTTVPITDCKQEPDLEHL 62

Query: 80  PGIRATMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKD 139
           PG+R TMCRKIRQKV+G WRY+R CA++GEPGI GDER+CLMRTGTYN+FMEYCTC SKD
Sbjct: 63  PGVRPTMCRKIRQKVNGVWRYFRSCAYMGEPGIEGDERFCLMRTGTYNIFMEYCTCNSKD 122

Query: 140 GCNTASLPNMS 150
           GCN AS  + S
Sbjct: 123 GCNAASYNHRS 133

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125985987|ref|XP_001356757.1| GA14397 [Drosophila pseudoobscura pseudoobscura] gi|195148204|ref|XP_002015064.1| GL18618 [Drosophila persimilis] gi|54645082|gb|EAL33822.1| GA14397 [Drosophila pseudoobscura pseudoobscura] gi|194107017|gb|EDW29060.1| GL18618 [Drosophila persimilis]

 Score =  191 bits (485), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 82/119 (68%), Positives = 96/119 (80%)

Query: 32  IFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIR 91
           +   ++     IKCW+CRSDSDPKC DPFDNS++ I DC+  PEL HL G+R TMCRKIR
Sbjct: 13  LLCFLLQTAQAIKCWDCRSDSDPKCGDPFDNSTLAITDCQQAPELEHLKGVRPTMCRKIR 72

Query: 92  QKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASLPNMS 150
           QKVHGEWRY+R CA++GEPGI GDERYCLMRTG+YN+FMEYCTC SKDGCN A LP + 
Sbjct: 73  QKVHGEWRYFRSCAYMGEPGIEGDERYCLMRTGSYNIFMEYCTCNSKDGCNGAGLPRLG 131

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332031542|gb|EGI71014.1| hypothetical protein G5I_00123 [Acromyrmex echinatior]

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 86/119 (72%), Positives = 102/119 (85%), Gaps = 6/119 (5%)

Query: 33  FTVVISAVSC------IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATM 86
           F  +I+A+ C      IKCW CRSDSDPKC+DPFDNS++PI +CK EP+L HLPG+R TM
Sbjct: 7   FFFLITALLCVQEGLSIKCWVCRSDSDPKCSDPFDNSTVPITNCKQEPDLEHLPGVRPTM 66

Query: 87  CRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTAS 145
           CRKIRQKV+GEWRY+R CA++GEPGI GDER+CLMRTGTYN+FMEYCTC SKDGCN+AS
Sbjct: 67  CRKIRQKVNGEWRYFRSCAYMGEPGIAGDERFCLMRTGTYNIFMEYCTCNSKDGCNSAS 125

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350400887|ref|XP_003485992.1| PREDICTED: hypothetical protein LOC100742412 [Bombus impatiens]

 Score =  189 bits (480), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 85/111 (76%), Positives = 96/111 (86%), Gaps = 1/111 (0%)

Query: 43  IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYR 102
           IKCW CRSDSDPKCADPFDN+++PI DCK EP+L HLPG+R TMCRKIRQKV+G WRY+R
Sbjct: 26  IKCWVCRSDSDPKCADPFDNTTVPITDCKQEPDLEHLPGVRPTMCRKIRQKVNGVWRYFR 85

Query: 103 GCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASLPNMSPIF 153
            CA++GEPGI GDER+CLMRTGTYN+FMEYCTC SKDGCN AS  N   IF
Sbjct: 86  SCAYMGEPGIEGDERFCLMRTGTYNIFMEYCTCNSKDGCNAASY-NHKSIF 135

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307205585|gb|EFN83877.1| hypothetical protein EAI_00430 [Harpegnathos saltator]

 Score =  188 bits (478), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 83/103 (80%), Positives = 94/103 (91%)

Query: 43  IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYR 102
           IKCW CRSDSDPKCADPFDNS++PI DCK EP+L HL G+R TMCRKIRQKV+GEWRY+R
Sbjct: 26  IKCWVCRSDSDPKCADPFDNSTVPITDCKQEPDLEHLRGVRPTMCRKIRQKVNGEWRYFR 85

Query: 103 GCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTAS 145
            CA++GEPGI GDER+CLMRTGTYN+FMEYCTC SKDGCN+AS
Sbjct: 86  SCAYMGEPGIAGDERFCLMRTGTYNIFMEYCTCNSKDGCNSAS 128

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195117920|ref|XP_002003493.1| GI17943 [Drosophila mojavensis] gi|193914068|gb|EDW12935.1| GI17943 [Drosophila mojavensis]

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 80/116 (68%), Positives = 93/116 (80%)

Query: 32  IFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIR 91
           +   ++   S IKCW CRSDSDPKC DPFDNS++ I DC+   EL HL G+R TMCRKIR
Sbjct: 13  VLCFLLQTASAIKCWECRSDSDPKCGDPFDNSTLAITDCQQASELEHLKGVRPTMCRKIR 72

Query: 92  QKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASLP 147
           QKVHGEWRY+R CA++GEPGI GDER+CLMRTG+YN+FMEYCTC SKDGCN A L 
Sbjct: 73  QKVHGEWRYFRSCAYMGEPGIEGDERFCLMRTGSYNIFMEYCTCNSKDGCNAAGLQ 128

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195472341|ref|XP_002088459.1| GE18579 [Drosophila yakuba] gi|194174560|gb|EDW88171.1| GE18579 [Drosophila yakuba]

 Score =  186 bits (472), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 78/121 (64%), Positives = 97/121 (80%)

Query: 29  MSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCR 88
            + +   ++     IKCW+CRSD+DPKC DPFDNS++ I DC+  PEL HL G+R TMCR
Sbjct: 10  FAVVLLCLLQVGQAIKCWDCRSDNDPKCGDPFDNSTLAITDCQQAPELEHLKGVRPTMCR 69

Query: 89  KIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASLPN 148
           KIRQKVHGEWRY+R CA++GEPGI GDERYCLMRTG+YN+FME+CTC SKDGCN+A +  
Sbjct: 70  KIRQKVHGEWRYFRSCAYMGEPGIEGDERYCLMRTGSYNIFMEFCTCNSKDGCNSAGIHR 129

Query: 149 M 149
           +
Sbjct: 130 L 130

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
FB|FBgn0032421	151	crok "crooked" [Drosophila mel	0.751	0.761	0.663	6.2e-46
FB|FBgn0032422	143	atilla "atilla" [Drosophila me	0.692	0.741	0.299	1.1e-05
FB|FBgn0051675	148	CG31675 [Drosophila melanogast	0.679	0.702	0.276	0.00086

FB|FBgn0032421 crok "crooked" [Drosophila melanogaster (taxid:7227)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 79/119 (66%), Positives = 98/119 (82%)

Query:    32 IFTVVISAV----SCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMC 87
             +F +V+  +      IKCW+CRSD+DPKC DPFDNS++ I DC+  PEL HL G+R TMC
Sbjct:     9 LFAIVLCCLLQLGQAIKCWDCRSDNDPKCGDPFDNSTLAITDCQQAPELEHLKGVRPTMC 68

Query:    88 RKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASL 146
             RKIRQKVHGEWRY+R CA++GEPGI GDER+CLMRTG+YN+FME+CTC SKDGCN+A +
Sbjct:    69 RKIRQKVHGEWRYFRSCAYMGEPGIEGDERFCLMRTGSYNIFMEFCTCNSKDGCNSAGI 127

GO:0035151 "regulation of tube size, open tracheal system" evidence=IMP

GO:0019991 "septate junction assembly" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

FB|FBgn0032422 atilla "atilla" [Drosophila melanogaster (taxid:7227)]

 Score = 103 (41.3 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 35/117 (29%), Positives = 54/117 (46%)

Query:    32 IFTVVISAVSCIKCWNCRSDSDPKCA-DPFDNSS-IPINDCKVEPELSHLPGIR-ATMCR 88
             I    + + S IKC+ C+S +DP CA D  D++S I   DC   P+ + +  ++  T C 
Sbjct:    11 IAVCTMHSASAIKCYQCKSLTDPNCAKDKIDSASNIRAVDCDSVPKPNTMEQLQPVTRCN 70

Query:    89 KIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYC-TCMSKDGCNTA 144
             K+           R C +     IG  +  C   T T++  +E C TC   D CN +
Sbjct:    71 KVVTSDRAGTIVSRDCHF---ESIGQKDNEC---TVTHSRQVESCYTCKG-DLCNAS 120

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

FB|FBgn0051675 CG31675 [Drosophila melanogaster (taxid:7227)]

 Score = 95 (38.5 bits), Expect = 0.00086, P = 0.00086
 Identities = 31/112 (27%), Positives = 50/112 (44%)

Query:    36 VISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCK-VEPEL---SHLPGIRATMCRKIR 91
             ++++   IKC+ C S  +  C D F+  +    DC  + P     + L  + AT C K  
Sbjct:    14 LLASAYAIKCYACESVYEASCGDDFEVENHFKYDCAFIAPPRFLENDLLSVNATACLKRV 73

Query:    92 QKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYC-TCMSKDGCN 142
              K +G  +  RGC + GE  +   + +C M      V    C  C S++ CN
Sbjct:    74 FKENGVRKIVRGC-YFGE--VNATDVWCKMDPTLSAVQNSSCHVCDSENYCN 122


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.137   0.474    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      153       153   0.00081  105 3  11 22  0.44    31
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  176 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.55u 0.08s 14.63t   Elapsed:  00:00:04
  Total cpu time:  14.55u 0.08s 14.63t   Elapsed:  00:00:05
  Start:  Thu Aug 15 12:20:56 2013   End:  Thu Aug 15 12:21:01 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	153
cd00117	79	LU Ly-6 antigen / uPA receptor -like domain; occur	97.67
PF00021	77	UPAR_LY6: u-PAR/Ly-6 domain omitted due to poor si	97.44
smart00134	79	LU Ly-6 antigen / uPA receptor -like domain. Three	97.33
PF01064	83	Activin_recp: Activin types I and II receptor doma	96.68
PF05444	152	DUF753: Protein of unknown function (DUF753); Inte	96.42
PF05444	152	DUF753: Protein of unknown function (DUF753); Inte	95.48
cd00206	64	snake_toxin Snake toxin domain, present in short a	95.36
PF06579	129	Ly-6_related: Caenorhabditis elegans ly-6-related	94.6
PF00087	63	Toxin_1: Snake toxin; InterPro: IPR003571 Snake to	93.55

>cd00117 LU Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor

Probab=97.67  E-value=0.00017  Score=48.62  Aligned_cols=75  Identities=23%  Similarity=0.386  Sum_probs=45.0

Q ss_pred             eeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEEC----CeEEEEEccccCCCCCCcCcccc
Q psy3643          43 IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVH----GEWRYYRGCAWLGEPGIGGDERY  118 (153)
Q Consensus        43 I~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v~----g~~~viR~C~~~~~~~~~~~~~~  118 (153)
                      |+||+|.+..+..|..+        +.|+.          ...+|.|++..+.    ....++|+|+..=..  ..... 
T Consensus         1 L~C~~C~~~~~~~C~~~--------~~C~~----------~~~~C~~~~~~~~~~~~~~~~~~rgC~~~C~~--~~~~~-   59 (79)
T cd00117           1 LECYSCTGVSTSSCSTE--------TNCPS----------PDDQCLTAVATVIEESVRLSLVVRGCASDCPF--TNVFG-   59 (79)
T ss_pred             CccCcCCCCCCCCCCCC--------CccCC----------CCCEeeEEEEEEEeeccccceEECcccCCCCC--CCccC-
Confidence            68999988666678532        26875          2367999888753    235688999873110  00000 


Q ss_pred             ceecccccceEEEEeEecCCCCCCCC
Q psy3643         119 CLMRTGTYNVFMEYCTCMSKDGCNTA  144 (153)
Q Consensus       119 C~~~~g~~~~~~~~C~C~~~D~CN~A  144 (153)
                          .+ ....+.+ .||++|+||++
T Consensus        60 ----~~-~~~~~~~-~CC~tD~CN~~   79 (79)
T cd00117          60 ----QL-SITFLKV-SCCQEDLCNAA   79 (79)
T ss_pred             ----cc-ccceEee-eeCCCCccCCC
Confidence                00 1111112 77799999986

Topology of these domains is similar to that of snake venom neurotoxins.

>PF00021 UPAR_LY6: u-PAR/Ly-6 domain omitted due to poor similarity

Probab=97.44  E-value=0.00075  Score=43.40  Aligned_cols=47  Identities=26%  Similarity=0.533  Sum_probs=35.3

Q ss_pred             EEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEEC--C--eEEEEEccccCCC
Q psy3643          45 CWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVH--G--EWRYYRGCAWLGE  109 (153)
Q Consensus        45 CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v~--g--~~~viR~C~~~~~  109 (153)
                      ||+|.+..+..|...        +.|+.          ....|..++..+.  +  ...++|+|+....
T Consensus         1 C~~C~~~~~~~C~~~--------~~C~~----------~~~~C~~~~~~~~~g~~~~~~~~kgC~~~~~   51 (77)
T PF00021_consen    1 CYSCYSPSSSSCSGE--------VTCPG----------SEDVCYTATVTVTSGGNSVTLVSKGCATQSS   51 (77)
T ss_dssp             EEEEECSTTTTSCTE--------EEECT----------TTSEEEEEEEEEETTTCCEEEEEEEEEETTC
T ss_pred             CCcccCCCCCCCCCC--------CCcCC----------CCCeeEEEEEEeeecccCceEEEeeccccCC
Confidence            899999877889642        68886          2467999988753  2  5677999997543

; InterPro: IPR001526 CD59 (also called 1F-5Ag, H19, HRF20, MACIF, MIRL, P-18 or protectin) inhibits formation of membrane attack complex (MAC), thus protecting cells from complement mediated lysis. It has a signalling role, as a GPI-anchored molecule, in T cell activation and appears to have some role in cell adhesion through CD2 (controversial). CD59 associates with C9, inhibiting incorporation into C5b-8 preventing terminal steps in polymerisation of the (MAC) in plasma membranes. Genetic defects in GPI-anchor attachment that cause a reduction or loss of both CD59 and CD55 on erythrocytes produce the symptoms of the disease paroxysmal nocturnal haemoglobinuria (PNH). A variety of GPI-linked cell-surface glycoproteins are composed of one or more copies of a conserved domain of about 100 amino-acid residues [], []. Among these proteins, U-PAR contains three tandem copies of the domain, while all the others are made up of a single domain. As shown in the following schematic, this conserved domain contains 10 cysteine residues involved in five disulphide bonds - in U-PAR, the first copy of the domain lacks the fourth disulphide bond. +------+ +------------------------+ +---+ | | | | | | xCxxCxxxxxxCxxxxxCxxxxxCxxxxxxxxxxxxxxxxxxCxxxxCxxxxxxxxxxxxxxCCxxxCxxxxxxxx | | | | +---------------------+ +--------------+ 'C': conserved cysteine involved in a disulphide bond. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/).; PDB: 2I9B_H 1YWH_E 3BT2_U 2FD6_U 3U74_U 3BT1_U 3U73_U 2L03_A 3LAQ_V 2J8B_A ....

>smart00134 LU Ly-6 antigen / uPA receptor -like domain

Probab=97.33  E-value=0.0015  Score=44.10  Aligned_cols=46  Identities=24%  Similarity=0.740  Sum_probs=32.2

Q ss_pred             eeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEE--CC-eEEEEEcccc
Q psy3643          43 IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKV--HG-EWRYYRGCAW  106 (153)
Q Consensus        43 I~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v--~g-~~~viR~C~~  106 (153)
                      |+||.|.+..+..|..        .+.|+.          ...+|.|++.++  .+ ..+|+|+|+.
T Consensus         1 L~C~~C~~~~~~~C~~--------~~~C~~----------~~~~C~~~~~~~~~~~~~~~~~rgC~~   49 (79)
T smart00134        1 LQCYSCTGNPDSSCSS--------EEECRS----------PDDVCLTVVAEVISGSVGSVVYKGCAT   49 (79)
T ss_pred             CcceecCCcCCCCCCC--------cceeCC----------CCCEeEEEEEEEEecCCCceEEcCccC
Confidence            6899998765667743        234886          246899987753  22 5678999994

Three-fold repeated domain in urokinase-type plasminogen activator receptor; occurs singly in other GPI-linked cell-surface glycoproteins (Ly-6 family, CD59, thymocyte B cell antigen, Sgp-2). Topology of these domains is similar to that of snake venom neurotoxins.

>PF01064 Activin_recp: Activin types I and II receptor domain; InterPro: IPR000472 Transforming growth factor-beta (TGF-beta) forms a family with other growth factors described in PDOC00223 from PROSITEDOC

Probab=96.68  E-value=0.005  Score=41.60  Aligned_cols=77  Identities=25%  Similarity=0.501  Sum_probs=50.9

Q ss_pred             eeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEECC--eEEEEEccccCCCCCCcCccccce
Q psy3643          43 IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHG--EWRYYRGCAWLGEPGIGGDERYCL  120 (153)
Q Consensus        43 I~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v~g--~~~viR~C~~~~~~~~~~~~~~C~  120 (153)
                      |+|| |+...   |.+.       ...|..           ..+|.+.++...+  ...+.|+|.-......... ..|.
T Consensus         1 l~C~-C~~~~---C~~~-------n~~C~t-----------~~~Cf~~~~~~~~~~~~~~~~GC~~~~~~~~~~~-~~C~   57 (83)
T PF01064_consen    1 LKCY-CDSDD---CNET-------NQTCET-----------GGFCFTSWEQDNGGGVEIVKKGCWSNEEDCPLCR-NQCR   57 (83)
T ss_dssp             EEEE-EETTC---HCTT-------TEEEEE-----------SCEEEEEEEEETTESEEEEEEEEEESTGGGTTTS-SSEE
T ss_pred             CEeE-eCccc---CCCC-------CCEeCC-----------CCEEEEEEEEeeccceeEEEcCccCCccCcceec-ceee
Confidence            6899 98764   7532       134663           2589999998876  5677899987654211111 5688


Q ss_pred             ecccccceEEEEeEecCCCCCCCCC
Q psy3643         121 MRTGTYNVFMEYCTCMSKDGCNTAS  145 (153)
Q Consensus       121 ~~~g~~~~~~~~C~C~~~D~CN~A~  145 (153)
                      ..+..  ....+|-| ++|.||+..
T Consensus        58 ~~~~~--~~~~~CC~-~~D~CN~~~   79 (83)
T PF01064_consen   58 SSSSP--SSVVFCCC-SGDFCNSNL   79 (83)
T ss_dssp             ECSSS--TCEEEEEE-SSTTGGGSE
T ss_pred             ccCCC--CCeEEECC-CCCccCCCC
Confidence            74322  34688977 899999865

The receptors for most of the members of this growth factor family are related. These proteins are receptor-type kinases of Ser/Thr type PDOC00100 from PROSITEDOC), which have a single transmembrane domain and a specific hydrophilic Cys-rich ligand-binding domain [, , ]. The C-terminal part of the extracellular domain is conserved. Some of the receptors of this family contain subclass-specific N-terminal extensions of this homology domain. The type I receptors also possess 7 extracellular residues preceding the cysteine box.; GO: 0004675 transmembrane receptor protein serine/threonine kinase activity, 0005024 transforming growth factor beta-activated receptor activity, 0016020 membrane; PDB: 3EVS_C 1BTE_A 1LX5_B 2GOO_C 2HLR_A 4FAO_W 2H64_C 2H62_D 1S4Y_C 1NYU_C ....

>PF05444 DUF753: Protein of unknown function (DUF753); InterPro: IPR008472 This entry contains sequences which are repeated in several uncharacterised proteins from Drosophila melanogaster

Probab=96.42  E-value=0.0057  Score=46.48  Aligned_cols=76  Identities=32%  Similarity=0.642  Sum_probs=46.1

Q ss_pred             EecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEECCeEEEEEccccCCCCCCcCccccceecccc
Q psy3643          46 WNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGT  125 (153)
Q Consensus        46 Y~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v~g~~~viR~C~~~~~~~~~~~~~~C~~~~g~  125 (153)
                      |+|+|..++.|.++ .......+.|...          ...|+.++.   +...++|+|.....   ......|..... 
T Consensus         1 ~~C~s~~~~~C~~~-~~~~~~~~~C~~~----------~~~C~t~~~---~~~~~~RGC~~~~~---~~~~~~C~~~~~-   62 (152)
T PF05444_consen    1 YSCDSCEDPNCTDP-DPSTSATEECPQQ----------DDQCYTRFD---DDGTTIRGCLSDLP---AEEQSSCSAGND-   62 (152)
T ss_pred             CCccCCcCCCCCCC-CCCceecccCCCC----------CCCCEEEEe---CCCceEcCchhhcc---hhhcccccCCCC-
Confidence            78999999999322 2333446788863          233876653   33349999987643   112345643322 


Q ss_pred             cceEEEEe-EecCCCCCCCCC
Q psy3643         126 YNVFMEYC-TCMSKDGCNTAS  145 (153)
Q Consensus       126 ~~~~~~~C-~C~~~D~CN~A~  145 (153)
                           ..| .| .+++||.+.
T Consensus        63 -----~~C~~C-~~~~CN~~~   77 (152)
T PF05444_consen   63 -----ANCVTC-SGDGCNNAV   77 (152)
T ss_pred             -----CcccCc-CCCCCCCcc
Confidence                 256 67 888888854

>PF05444 DUF753: Protein of unknown function (DUF753); InterPro: IPR008472 This entry contains sequences which are repeated in several uncharacterised proteins from Drosophila melanogaster

Probab=95.48  E-value=0.048  Score=41.38  Aligned_cols=68  Identities=29%  Similarity=0.592  Sum_probs=46.7

Q ss_pred             EE-eecCCCCccCCCCCCccceeeeeeCccceeeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEE
Q psy3643          12 YC-TCMSKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKI   90 (153)
Q Consensus        12 ~~-~~~~~~~cn~a~~~~~~~l~~l~i~~~~aI~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Ki   90 (153)
                      .| +| +.++||.+.+|            ...++||+|.  .+..|.   .......+.|...        .....|.-.
T Consensus        64 ~C~~C-~~~~CN~~~~p------------~~~~~C~qC~--~~~~C~---~~~~~~~~~C~~~--------~~~d~Cyt~  117 (152)
T PF05444_consen   64 NCVTC-SGDGCNNAVFP------------ADRLSCYQCT--DDSDCV---SSDSSTAKPCPNY--------SEDDQCYTR  117 (152)
T ss_pred             cccCc-CCCCCCCcccc------------ccCCEeeeCC--CCCCCC---CCCCcCcCcCcCC--------CCCCcCEEE
Confidence            45 67 89999998876            5668999999  789992   1222345678752        123458766


Q ss_pred             EEEECCeEEEEEccccCC
Q psy3643          91 RQKVHGEWRYYRGCAWLG  108 (153)
Q Consensus        91 vq~v~g~~~viR~C~~~~  108 (153)
                      +.   ....|.|+|....
T Consensus       118 ~~---~~~~~~RGC~s~l  132 (152)
T PF05444_consen  118 VD---DGGVVERGCLSDL  132 (152)
T ss_pred             Ee---eCCEEEeCCCCcc
Confidence            55   3346899998864

>cd00206 snake_toxin Snake toxin domain, present in short and long neurotoxins, cytotoxins and short toxins, and in other miscellaneous venom peptides

Probab=95.36  E-value=0.04  Score=36.14  Aligned_cols=23  Identities=35%  Similarity=0.397  Sum_probs=16.0

Q ss_pred             CceEEEEEEE-CCeEEEEEccccC
Q psy3643          85 TMCRKIRQKV-HGEWRYYRGCAWL  107 (153)
Q Consensus        85 t~C~Kivq~v-~g~~~viR~C~~~  107 (153)
                      ..|.|..-.. ....+|.|+|+..
T Consensus        22 ~~Cyk~~~~~~~~g~~i~rGCa~t   45 (64)
T cd00206          22 NICYKKSWKDTPRGVRIERGCAAT   45 (64)
T ss_pred             CccceeEEEcCCCCCEEEccccCc
Confidence            5688774443 4456899999865

The toxin acts by binding to the nicotinic acetylcholine receptors in the postsynaptic membrane of skeletal muscles and preventing the binding of acetylcholine, thereby blocking the excitation of muscles. This domain contains 60-75 amino acids that are fixed by 4-5 disulfide bridges and is nearly all beta sheet; it exists as either monomers or dimers.

>PF06579 Ly-6_related: Caenorhabditis elegans ly-6-related protein; InterPro: IPR010558 This family consists of several Caenorhabditis elegans specific ly-6-related HOT and ODR proteins

Probab=94.60  E-value=0.067  Score=40.17  Aligned_cols=59  Identities=24%  Similarity=0.570  Sum_probs=35.7

Q ss_pred             CceEEEEEE--ECC---eEEEEEccccCC-CCCCcC--------ccccceecc-------c-----ccceEEEEeEecCC
Q psy3643          85 TMCRKIRQK--VHG---EWRYYRGCAWLG-EPGIGG--------DERYCLMRT-------G-----TYNVFMEYCTCMSK  138 (153)
Q Consensus        85 t~C~Kivq~--v~g---~~~viR~C~~~~-~~~~~~--------~~~~C~~~~-------g-----~~~~~~~~C~C~~~  138 (153)
                      +.|+-+++.  +.|   ...+||+|.-.- -.|.++        ..+.|..-.       +     ....++..|+| .+
T Consensus        45 s~Cvtl~e~~~~~gg~~~~~yIRGC~~~I~~~G~n~t~t~~~~~~~~~C~~~~~s~Lf~~~~~~~~~~~~~v~vCsC-~g  123 (129)
T PF06579_consen   45 SICVTLFEPLDIFGGTRGFGYIRGCLDSILRHGFNDTITLSFLDRRDICRRLRLSQLFPPGRRREHPSDSTVQVCSC-YG  123 (129)
T ss_pred             chheeeEeccccccccccccEEEcCHHHHHHhCCCCchHHHHhcCCCeeeeccHHHhcCcccccccCCCCeEEEEEE-CC
Confidence            479999987  333   467899998531 011111        112466211       1     01245799999 99


Q ss_pred             CCCCCC
Q psy3643         139 DGCNTA  144 (153)
Q Consensus       139 D~CN~A  144 (153)
                      |+||+|
T Consensus       124 d~CN~s  129 (129)
T PF06579_consen  124 DRCNGS  129 (129)
T ss_pred             CccCCC
Confidence            999986

These proteins are involved in the olfactory system. Odr-2 mutants are known to be defective in the ability to chemotax to odorants that are recognised by the two AWC olfactory neurons. Odr-2 encodes a membrane-associated protein related to the Ly-6 superfamily of GPI-linked signalling proteins [].

>PF00087 Toxin_1: Snake toxin; InterPro: IPR003571 Snake toxins belong to a family of proteins [] which groups short and long neurotoxins, cytotoxins and short toxins, as well as a other miscellaneous venom peptides

Probab=93.55  E-value=0.17  Score=33.10  Aligned_cols=42  Identities=33%  Similarity=0.524  Sum_probs=26.0

Q ss_pred             CceEEEEEEEC-CeEEEEEccccCCCCCCcCccccceecccccceEEEEeEecCCCCCC
Q psy3643          85 TMCRKIRQKVH-GEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCN  142 (153)
Q Consensus        85 t~C~Kivq~v~-g~~~viR~C~~~~~~~~~~~~~~C~~~~g~~~~~~~~C~C~~~D~CN  142 (153)
                      ..|-|.+-... ...+|+|+|+..           |.....  +..+   .||.+|.||
T Consensus        21 ~~Cy~k~~~~~~~~~~~~rGCa~t-----------CP~~~~--~~~v---~CC~TD~CN   63 (63)
T PF00087_consen   21 NICYKKTWMDHPRGMRVERGCAAT-----------CPTPKP--GEKV---KCCSTDKCN   63 (63)
T ss_dssp             SEEEEEEEEETSTEEEEEEEEESS-----------SSSSBS--SEEE---EEESSTTTT
T ss_pred             CeeEEEEEecCCCCceEecchhcc-----------CcCCCC--CCeE---EEcCCCCCC
Confidence            57995444433 688999999964           321111  1222   466999999

Most of these toxins act by binding to the nicotinic acetylcholine receptors in the postsynaptic membrane of skeletal muscles and prevent the binding of acetylcholine, thereby blocking the excitation of muscles. Snake toxins are proteins that consist of sixty to seventy five amino acids. Among the invariant residues are eight cysteines all involved in disulphide bonds. The structure is small, disulphide-rich, nearly all beta sheet.; GO: 0005576 extracellular region; PDB: 3NEQ_B 2H5F_A 3PLC_A 1NOR_A 1UG4_A 1FFJ_A 1CCQ_A 1CB9_A 1VB0_A 1ONJ_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	153
3laq_U	277	UPAR, U-PAR, urokinase plasminogen activator surfa	97.51
2l03_A	74	LY-6/neurotoxin-like protein 1; LYNX1, acetylcholi	97.48
3laq_U	277	UPAR, U-PAR, urokinase plasminogen activator surfa	97.43
2h7z_B	77	Irditoxin subunit B; three-finger toxin, neurotoxi	97.38
1ywh_A	313	Urokinase plasminogen activator surface receptor;	97.25
2h5f_A	77	Denmotoxin; three-finger toxin, neurotoxin, snake	97.11
2fd6_U	276	Urokinase plasminogen activator surface receptor;	97.09
2j8b_A	79	CD59 glycoprotein; lipid-binding protein, lipid-bi	97.05
3neq_A	66	Muscarinic M1-toxin1, muscarinic toxin 1; chimeric	96.81
1hc9_A	74	Alpha-bungarotoxin; toxin/peptide, complex (toxin/	96.69
2h7z_A	75	Irditoxin subunit A; three-finger toxin, neurotoxi	96.56
1ff4_A	65	Muscarinic toxin/acetylcholine receptor binding P;	96.51
1ywh_A	313	Urokinase plasminogen activator surface receptor;	96.48
2jqp_A	65	WEAK toxin 1; protein; NMR {Bungarus candidus}	96.45
2l5s_A	88	TGF-beta receptor type-1; ALK5, transforming growt	96.41
2pjy_C	79	TGF-beta receptor type-1; ternary complex, three f	96.26
1ntn_A	72	Neurotoxin I; postsynaptic neurotoxin; 1.90A {Naja	96.21
2h62_C	129	Bone morphogenetic protein receptor type IA; TGF-b	96.11
2fd6_U	276	Urokinase plasminogen activator surface receptor;	96.03
1kba_A	66	Kappa-bungarotoxin; 2.30A {Bungarus multicinctus}	95.93
1vyc_A	65	Bucain, neurotoxin; snake neurotoxin; NMR {Bungaru	95.8
1jgk_A	66	Candoxin; beta sheet, snake venom protein, toxin;	95.65
1mr6_A	68	Neurotoxin; venom; NMR {Bungarus multicinctus} SCO	95.61
1cvo_A	62	Cardiotoxin V; cytotoxin; NMR {Naja atra} SCOP: g.	94.95
1lsi_A	66	LSIII; venom, multigene family, neurotoxin; NMR {L	94.62
3evs_C	119	Bone morphogenetic protein receptor type-1B; ligan	93.68
3era_A	62	Erabutoxin A; snake neurotoxin, venom, postsynapti	93.45
4aea_A	71	Long neurotoxin 1; three-finger toxin, nicotinic a	92.86
3plc_A	63	Beta-cardiotoxin OH-27; beta-sheet, novel cardioto	92.67
3vts_A	61	Cytotoxin 1; three finger toxin, venom toxin; 2.43	92.52
3hh7_A	65	Muscarinic toxin-like protein 3 homolog; haditoxin	91.85
1f94_A	63	Bucandin; three-finger snake presynaptic neurotoxi	91.39
1ug4_A	60	Cytotoxin 6, cardiotoxin VI; cobra, venom; 1.60A {	91.22
1vb0_A	61	Cobrotoxin B; short-chain neurotoxin, three-finger	87.45
1ntx_A	60	Alpha-neurotoxin; NMR {Dendroaspis polylepis polyl	84.87

>3laq_U UPAR, U-PAR, urokinase plasminogen activator surface receptor; ATF, supar, smupar, MATF, disulfide bond, EGF-LIK hydrolase, kringle; HET: NAG; 3.20A {Mus musculus}

Probab=97.51  E-value=0.00023  Score=58.44  Aligned_cols=104  Identities=17%  Similarity=0.389  Sum_probs=65.2

Q ss_pred             EEEEeecCCCCccCCCCCCccceeeeeeCccceeeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEE
Q psy3643          10 MEYCTCMSKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRK   89 (153)
Q Consensus        10 ~~~~~~~~~~~cn~a~~~~~~~l~~l~i~~~~aI~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~K   89 (153)
                      ...| | +.|+||.+..+      .+......+++||.|.+.....|..    +....++|...          .+.|..
T Consensus       165 ~~~C-C-~tDlCN~~~~~------~p~~~~pNGl~C~sC~~~~~~~C~~----~~~~~~~C~G~----------et~C~~  222 (277)
T 3laq_U          165 FLKC-C-NYTHCNGGPVL------DLQSFPPNGFQCYSCEGNNTLGCSS----EEASLINCRGP----------MNQCLV  222 (277)
T ss_dssp             EEEE-E-SSTTTTCSSCC------CSTTSCCCSCEEEEBCSSSSSSSSS----SSCEEEECCTT----------CCEEEE
T ss_pred             EEee-c-CCcccCCCCCC------CCCCCCCcccCCCCcccCCCCCCCC----CCCcceEcCCC----------CCcceE
Confidence            4455 5 88999998842      2224667899999999987788963    11135788862          367987


Q ss_pred             EEEEEC--CeEEEEEccccCCCCCCcCccccceec-cccc---c-eEEEEeEecCCCCCCCCCC
Q psy3643          90 IRQKVH--GEWRYYRGCAWLGEPGIGGDERYCLMR-TGTY---N-VFMEYCTCMSKDGCNTASL  146 (153)
Q Consensus        90 ivq~v~--g~~~viR~C~~~~~~~~~~~~~~C~~~-~g~~---~-~~~~~C~C~~~D~CN~A~~  146 (153)
                      ....+.  ....++|+|+-...         |... .+++   . .+..  +||.+|+||+|..
T Consensus       223 ~~g~~~~g~~~~~~kGCat~S~---------C~~~~~~~~~~~~~~~~~--sCC~g~lCN~~~~  275 (277)
T 3laq_U          223 ATGLDVLGNRSYTVRGCATASW---------CQGSHVADSFPTHLNVSV--SCCHGSGCNSPTG  275 (277)
T ss_dssp             ECCC-----CCCCEEEEECSSS---------SSSSHHHHTSSCCSSCCE--EEESSSGGGSCC-
T ss_pred             EEeEEecCceeEEecCCCCccc---------cCCCCcccceeeccceee--EecCCCCcCCCCC
Confidence            765432  34567899996532         5422 1111   0 1112  6779999999975

>2l03_A LY-6/neurotoxin-like protein 1; LYNX1, acetylcholine receptor, endogenic neuromodulator, Thr toxins, signaling protein; NMR {Homo sapiens}

Probab=97.48  E-value=0.00035  Score=45.79  Aligned_cols=73  Identities=18%  Similarity=0.350  Sum_probs=42.8

Q ss_pred             eeeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEE-ECCeEEEEEccccCCCCCCcCccccce
Q psy3643          42 CIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQK-VHGEWRYYRGCAWLGEPGIGGDERYCL  120 (153)
Q Consensus        42 aI~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~-v~g~~~viR~C~~~~~~~~~~~~~~C~  120 (153)
                      .|+||+|.+ ....|..        .+.|+.          ...+|.|+... .....+|.|+|+..=..   .  ..  
T Consensus         1 ~L~C~~C~~-~~~~c~~--------~~~C~~----------~~~~C~t~~~~~~~~~~~v~rgC~~~Cp~---~--~~--   54 (74)
T 2l03_A            1 MLDCHVCAY-NGDNCFN--------PMRCPA----------MVAYCMTTRTYYTPTRMKVSKSCVPRCFE---T--VY--   54 (74)
T ss_dssp             CCEEECEEE-SSSCCCC--------EEECCT----------TCCEEEEEEEEEETTEEEEEEEEESCCCC---C--CC--
T ss_pred             CCEeeECCC-CCCcCCC--------CeEcCC----------CCCEEEEEEEEccCCCceEeccccCcCcC---C--cc--
Confidence            479999996 3456642        446886          23689887653 33457899999753210   0  00  


Q ss_pred             ecccccceEEEEeEecCCCCCCC
Q psy3643         121 MRTGTYNVFMEYCTCMSKDGCNT  143 (153)
Q Consensus       121 ~~~g~~~~~~~~C~C~~~D~CN~  143 (153)
                      .   ..++..+.=+||.+|+||+
T Consensus        55 ~---~~~~~~~~v~CC~tDlCN~   74 (74)
T 2l03_A           55 D---GYSKHASTTSCCQYDLCNG   74 (74)
T ss_dssp             C---SSSCCSEEEEEECSTTTTC
T ss_pred             c---cccccceEeEeCCCCCCCC
Confidence            0   1111112336779999995

>3laq_U UPAR, U-PAR, urokinase plasminogen activator surface receptor; ATF, supar, smupar, MATF, disulfide bond, EGF-LIK hydrolase, kringle; HET: NAG; 3.20A {Mus musculus}

Probab=97.43  E-value=0.00041  Score=56.92  Aligned_cols=103  Identities=18%  Similarity=0.361  Sum_probs=58.3

Q ss_pred             CCCCccCCCCCCccceeeeeeCccceeeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEE--
Q psy3643          17 SKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKV--   94 (153)
Q Consensus        17 ~~~~cn~a~~~~~~~l~~l~i~~~~aI~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v--   94 (153)
                      -.|+||--.-.  ..+  ..+..+++|+||+|.+ .+..|...    ....+.|+.          ..+.|+.++.++  
T Consensus        72 ~~dlcn~~~~~--~~~--~~f~~G~sL~CysC~~-~~~sC~~G----~~~~~tC~~----------~~d~C~~~vt~~t~  132 (277)
T 3laq_U           72 ATNLCNRPRPG--ARG--RAFPQGRYLECASCTS-LDQSCERG----REQSLQCRY----------PTEHCIEVVTLQST  132 (277)
T ss_dssp             SSTTCSCSCC---------------CCEEECEET-TTTCSSSS----CCCEEECSS----------TTCCEEEEEEEECT
T ss_pred             cccccCCCCCC--CCC--CCcCCccceEeEeCCC-CCCCccCC----CcceeECCC----------CCCeeeEEEEEEee
Confidence            78999974311  111  1234489999999999 67889521    013668986          236799877764  


Q ss_pred             -CC--eEEEEEccccCCCCCCcCccccceecccccceE-EEEeEecCCCCCCCCCCC
Q psy3643          95 -HG--EWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVF-MEYCTCMSKDGCNTASLP  147 (153)
Q Consensus        95 -~g--~~~viR~C~~~~~~~~~~~~~~C~~~~g~~~~~-~~~C~C~~~D~CN~A~~~  147 (153)
                       ++  ..+++|+|....+         |......+..+ ...=+||++|+||.+..+
T Consensus       133 ~g~~~~~~~~K~C~~~s~---------C~gs~~~~~~~~~~~~~CC~tDlCN~~~~~  180 (277)
T 3laq_U          133 ERSLKDEDYTRGCGSLPG---------CPGTAGFHSNQTFHFLKCCNYTHCNGGPVL  180 (277)
T ss_dssp             TCSCCCCSEEEEEEECSS---------CSEEEEEECSSEEEEEEEESSTTTTCSSCC
T ss_pred             cCCcccceEEecCCCCCC---------CCCceecccceEEEEEeecCCcccCCCCCC
Confidence             23  2567899976433         32111111111 123477799999999864

>2h7z_B Irditoxin subunit B; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1

Probab=97.38  E-value=0.00052  Score=45.96  Aligned_cols=71  Identities=21%  Similarity=0.469  Sum_probs=43.4

Q ss_pred             CccceeeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEEC-CeEE-EEEccccCCCCCCcCc
Q psy3643          38 SAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVH-GEWR-YYRGCAWLGEPGIGGD  115 (153)
Q Consensus        38 ~~~~aI~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v~-g~~~-viR~C~~~~~~~~~~~  115 (153)
                      .-+.+ +||+|+......|.        ..+.|+..          ...|.|...... ...+ |.|+|+..        
T Consensus         4 ~~~~~-~C~~C~~~~s~~c~--------~~~tCp~g----------~~~Cyk~~~~~~~~g~~~i~rGCa~t--------   56 (77)
T 2h7z_B            4 GPPYT-LCFECNRETCSNCF--------KDNRCPPY----------HRTCYTLYRPDGNGEMKWAVKGCAKT--------   56 (77)
T ss_dssp             CCSCC-EECCEETTTCCSCS--------SCEECCTT----------CCEEEEEEEECSSSCEEEEEEEEESS--------
T ss_pred             CCCCC-ccccCCCCccCCCc--------cCcCcCCC----------cCEEeEEEEecCCCCceeEeCCcCCc--------
Confidence            34667 99999986555553        23468852          257988866542 2345 89999754        


Q ss_pred             cccceecccccceEEEEeEecCCCCCCC
Q psy3643         116 ERYCLMRTGTYNVFMEYCTCMSKDGCNT  143 (153)
Q Consensus       116 ~~~C~~~~g~~~~~~~~C~C~~~D~CN~  143 (153)
                         |.....  ++   .=.||++|+||.
T Consensus        57 ---Cp~~~~--~~---~v~CC~TD~CN~   76 (77)
T 2h7z_B           57 ---CPTAQP--GE---SVQCCNTPKCND   76 (77)
T ss_dssp             ---CCCCCT--TC---EEEEECSTTTTC
T ss_pred             ---CcCCCC--Cc---eeEecCCCCCCC
Confidence               221111  11   125669999995

>1ywh_A Urokinase plasminogen activator surface receptor; UPAR, three-finger fold, protein-peptide complex, hydrolase; HET: ALC NAG FUC NDG BMA MAN; 2.70A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3

Probab=97.25  E-value=0.00029  Score=58.78  Aligned_cols=104  Identities=21%  Similarity=0.493  Sum_probs=63.6

Q ss_pred             EEEEeecCCCCccCCCCCCccceeeeeeCccceeeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEE
Q psy3643          10 MEYCTCMSKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRK   89 (153)
Q Consensus        10 ~~~~~~~~~~~cn~a~~~~~~~l~~l~i~~~~aI~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~K   89 (153)
                      ...| | +.|.||.+  |++    .+.-..-.+|+||.|-+.....|...    ...+++|..          +.+.|..
T Consensus       167 ~~~C-C-~TD~CN~~--p~l----pp~~~~pNGL~CysC~~~~s~~Cs~e----~~~~v~CtG----------~En~Clt  224 (313)
T 1ywh_A          167 FLKC-C-NTTKCNEG--PIL----ELENLPQNGRQCYSCKGQSTHGCSSE----ETFLIDCRG----------PMNQCLV  224 (313)
T ss_dssp             EEEE-E-CSTTTTCS--SCC----CGGGSCEEEEEEEEEEEBTTTBSSGG----GCEEEEEET----------TCCEEEE
T ss_pred             eeee-e-CCCCcCCC--CCC----CCCCCCCCCCCCCCcccCCCCCCCCC----CccceecCC----------CCCccee
Confidence            4444 5 88999943  332    22234458999999999876668632    012367874          2367999


Q ss_pred             EEEEEC--CeEEEEEccccCCCCCCcCccccceec--ccccceEEEEeEecCCCCCCCC
Q psy3643          90 IRQKVH--GEWRYYRGCAWLGEPGIGGDERYCLMR--TGTYNVFMEYCTCMSKDGCNTA  144 (153)
Q Consensus        90 ivq~v~--g~~~viR~C~~~~~~~~~~~~~~C~~~--~g~~~~~~~~C~C~~~D~CN~A  144 (153)
                      +...+.  +...++|+|+...         .|...  ...+.+....=+|+++|+||++
T Consensus       225 ~~g~~g~~~~~~~~KGCas~S---------~C~~~~~~~~~~v~~~~isCC~g~LCN~~  274 (313)
T 1ywh_A          225 ATGTHEPKNQSYMVRGCATAS---------MCQHAHLGDAFSMNHIDVSCCTKSGCNHP  274 (313)
T ss_dssp             EEECCSSSSCCEEEEEEECGG---------GGTCHHHHTSSCCSSCEEEEESSTTCCSS
T ss_pred             eEeeeccCCceEEeccCCCcc---------cccCCCccceecccceEeEcCCCCCcCCc
Confidence            988752  3467899999642         24421  1112221011177799999999

>2h5f_A Denmotoxin; three-finger toxin, neurotoxin, snake venom; 1.90A {Boiga dendrophila} SCOP: g.7.1.1

Probab=97.11  E-value=0.0006  Score=45.64  Aligned_cols=71  Identities=17%  Similarity=0.362  Sum_probs=43.4

Q ss_pred             CccceeeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEEC--CeEEEEEccccCCCCCCcCc
Q psy3643          38 SAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVH--GEWRYYRGCAWLGEPGIGGD  115 (153)
Q Consensus        38 ~~~~aI~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v~--g~~~viR~C~~~~~~~~~~~  115 (153)
                      .-+.+ +||+|+......|.        ..+.|+..          ...|.|......  |..+|.|+|+..        
T Consensus         4 ~~~~~-~C~~C~~~~s~~c~--------~~~tCp~g----------~~~Cyk~~~~~~~~g~~~i~rGCa~t--------   56 (77)
T 2h5f_A            4 GLPHG-FCIQCNRKTWSNCS--------IGHRCLPY----------HMTCYTLYKPDENGEMKWAVKGCARM--------   56 (77)
T ss_dssp             CCCEE-EEECEESSSSSCTT--------SEEEEEET----------CCEEEEEEECCSSSCCEEEEEEEESS--------
T ss_pred             CCCCC-ccccCCCCcCCCCc--------cccEeCCC----------cCEEeeEEEeCCCCCccEEECCccCc--------
Confidence            34667 99999987655553        24468752          257988855322  237899999754        


Q ss_pred             cccceecccccceEEEEeEecCCCCCCC
Q psy3643         116 ERYCLMRTGTYNVFMEYCTCMSKDGCNT  143 (153)
Q Consensus       116 ~~~C~~~~g~~~~~~~~C~C~~~D~CN~  143 (153)
                         |.....  ++   .=.||.+|+||.
T Consensus        57 ---Cp~~~~--~~---~v~CC~TD~CN~   76 (77)
T 2h5f_A           57 ---CPTAKS--GE---RVKCCTGASCNS   76 (77)
T ss_dssp             ---CCCCCT--TC---EEEEECSTTTTC
T ss_pred             ---CcCCCC--Cc---eeEecCCCCCCC
Confidence               221111  11   125669999995

>2fd6_U Urokinase plasminogen activator surface receptor; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3 PDB: 3bt2_U* 3bt1_U* 2i9b_E* 3u74_U* 3u73_U*

Probab=97.09  E-value=0.0012  Score=54.08  Aligned_cols=100  Identities=21%  Similarity=0.382  Sum_probs=52.5

Q ss_pred             CCCCccCCCCCCccceeeeeeCccceeeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEE---E
Q psy3643          17 SKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQ---K   93 (153)
Q Consensus        17 ~~~~cn~a~~~~~~~l~~l~i~~~~aI~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq---~   93 (153)
                      ..|+||--. |    ..+.++..+.+|.||+|.+....-|...     ...+.|+..          ...|..++.   .
T Consensus        73 ~~~lcn~~~-~----~~~v~~~~g~sLsC~sC~~~~~scc~g~-----~~s~tCp~~----------~d~Cvt~~~~~s~  132 (276)
T 2fd6_U           73 GLDLCNQGN-S----GRAVTYSRSRYLECISCGSSDMSCERGR-----HQSLQCRSP----------EEQCLDVVTHWIQ  132 (276)
T ss_dssp             CSTTTTSCC----------------CCEEEEEETTTTTTTTTC-----CEEEECSST----------TCEEEEEEEEC--
T ss_pred             CccccCCCC-c----ccceeecccCCcCCccCCCCCCccccCC-----CcccCCCCC----------CCEEEEEEEeeee
Confidence            789999543 2    2223344589999999999864444320     135689862          247998876   2


Q ss_pred             --ECCe---EEEEEccccCCCCCCcCccccce--ecccccceEEEEeEecCCCCCCCCCC
Q psy3643          94 --VHGE---WRYYRGCAWLGEPGIGGDERYCL--MRTGTYNVFMEYCTCMSKDGCNTASL  146 (153)
Q Consensus        94 --v~g~---~~viR~C~~~~~~~~~~~~~~C~--~~~g~~~~~~~~C~C~~~D~CN~A~~  146 (153)
                        ++|.   ..+.|+|+....         |.  ...+...++... +||++|+||+++.
T Consensus       133 a~~~g~~~~~~~~KgC~~ss~---------C~gsv~~~~~~~~~~~-~CC~tD~CN~~p~  182 (276)
T 2fd6_U          133 EGEEGRPKDDRHLRGCGYLPG---------CPGSNGFHNNDTFHFL-KCCNTTKCNEGPI  182 (276)
T ss_dssp             --------CCSEEEEEEECTT---------CSEEEEEEETTEEEEE-EEECSTTTTCSSC
T ss_pred             ecccCccceeeEecCCCCcCC---------CCCeEEeCCceEEEee-EccCCCccCCCCC
Confidence              2342   235799976543         41  111111122222 8889999997765

>2j8b_A CD59 glycoprotein; lipid-binding protein, lipid-binding protein MAC, membrane, GPI-anchor, complement, lipoprotein; 1.15A {Homo sapiens} SCOP: g.7.1.3 PDB: 2ux2_A 2uwr_A 1cdq_A 1cdr_A* 1cds_A* 2ofs_A 1erg_A 1erh_A

Probab=97.05  E-value=0.00035  Score=46.89  Aligned_cols=73  Identities=19%  Similarity=0.441  Sum_probs=43.7

Q ss_pred             eeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEECCeEEEEEccccCCCCCCcCccccceec
Q psy3643          43 IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMR  122 (153)
Q Consensus        43 I~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v~g~~~viR~C~~~~~~~~~~~~~~C~~~  122 (153)
                      |+||+|.... ..|..        .++|+..          .++|+.+..  +  ..+.|+|+...+         |...
T Consensus         2 L~Cy~C~~~~-~~C~~--------~~~C~~~----------~d~C~t~~~--~--~~~~k~C~~~~~---------C~~~   49 (79)
T 2j8b_A            2 LQCYNCPNPT-ADCKT--------AVNCSSD----------FDACLITKA--G--LQVYNKCWKFEH---------CNFN   49 (79)
T ss_dssp             CEEECCSSCC-TTCCC--------EEECCTT----------CCEEEEEEE--T--TEEEEEEECGGG---------CSHH
T ss_pred             cCCcCCCCCC-CCCcc--------ceecCCC----------CCEeEEEEe--C--CeeEecccCccC---------CCch
Confidence            7999999764 55752        3578862          358976655  2  367899986432         2211


Q ss_pred             c--cccceEEEEeEecCCCCCCCCCCC
Q psy3643         123 T--GTYNVFMEYCTCMSKDGCNTASLP  147 (153)
Q Consensus       123 ~--g~~~~~~~~C~C~~~D~CN~A~~~  147 (153)
                      .  ..+.+....=.||++|+||+|..+
T Consensus        50 ~~~~~~~~~~~~~~CC~~DLCN~~~~~   76 (79)
T 2j8b_A           50 DVTTRLRENELTYYCCKKDLCNFNEQL   76 (79)
T ss_dssp             HHHHHHTCSSCEEEEECSTTCCCGGGC
T ss_pred             hhcchhccCCcceEECCcccCCCCcCc
Confidence            0  000010122367799999999765

>3neq_A Muscarinic M1-toxin1, muscarinic toxin 1; chimeric muscarinic toxin, HM1-muscarinic receptor, snake to green mamba; 1.25A {Dendroaspis angusticeps} PDB: 2vlw_A* 3fev_A 4do8_A

Probab=96.81  E-value=0.0046  Score=39.77  Aligned_cols=65  Identities=25%  Similarity=0.394  Sum_probs=41.1

Q ss_pred             eeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEE-CCeEEEEEccccCCCCCCcCcccccee
Q psy3643          43 IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKV-HGEWRYYRGCAWLGEPGIGGDERYCLM  121 (153)
Q Consensus        43 I~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v-~g~~~viR~C~~~~~~~~~~~~~~C~~  121 (153)
                      |+||.|.|.   .|.        ..+.|+..          ..+|.|+.... .+..+|.|+|+..=           ..
T Consensus         1 l~C~~~~~~---~~~--------~~~tC~~g----------~~~C~~~~~~~~~~~~~i~rGCa~~C-----------p~   48 (66)
T 3neq_A            1 LTCVKSNSI---WFP--------TSEDCPDG----------QNLCFKRWQYISPRMYDFTRGCAATC-----------PK   48 (66)
T ss_dssp             CEEEEBCSS---SCC--------EEEECCTT----------CCEEEEEEEEEETTEEEEEEEEESSC-----------CC
T ss_pred             CCCccCCCC---CCC--------cceEcCCC----------CCEEeEEEEecCCCCCEEeCCCcCcC-----------CC
Confidence            689999975   221        24468862          36899987776 55788999997742           21


Q ss_pred             cccccceEEEEeEecCCCCCCC
Q psy3643         122 RTGTYNVFMEYCTCMSKDGCNT  143 (153)
Q Consensus       122 ~~g~~~~~~~~C~C~~~D~CN~  143 (153)
                      ... .++   .=.||.+|+||.
T Consensus        49 ~~~-~~~---~v~CC~TD~CN~   66 (66)
T 3neq_A           49 PTN-VRE---TIRCCGTDKCNK   66 (66)
T ss_dssp             CSS-TTE---EEEEECSTTTTC
T ss_pred             CCC-CCC---EeeECCCCCCCC
Confidence            110 112   125669999994

>1hc9_A Alpha-bungarotoxin; toxin/peptide, complex (toxin/peptide), acetylcholine receptor mimitope, alpha-bungarotoxin, 3- finger; 1.8A {Bungarus multicinctus} SCOP: g.7.1.1 PDB: 2qc1_A* 1abt_A 1bxp_A 1haa_A 1haj_A 1hc9_B 1hoy_A 1idg_A 1idh_A 1idi_A 1idl_A 1ik8_A 1ikc_A 1jbd_A 1kc4_A 1kfh_A 1kl8_A 1l4w_A 1ljz_A 1rgj_A ...

Probab=96.69  E-value=0.0045  Score=40.94  Aligned_cols=67  Identities=21%  Similarity=0.281  Sum_probs=40.8

Q ss_pred             eeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEEC----CeEEEEEccccCCCCCCcCcccc
Q psy3643          43 IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVH----GEWRYYRGCAWLGEPGIGGDERY  118 (153)
Q Consensus        43 I~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v~----g~~~viR~C~~~~~~~~~~~~~~  118 (153)
                      |+||.|.|    .|   +     ..+.|+..          ..+|.|......    ...+|.|+|+..           
T Consensus         1 l~C~~~~~----~~---~-----~~~tCp~g----------~~~Cyk~~~~~~~~~~~g~~i~rGCa~t-----------   47 (74)
T 1hc9_A            1 IVCHTTAT----SP---I-----SAVTCPPG----------ENLCYRKMWCDVFCSSRGKVVELGCAAT-----------   47 (74)
T ss_dssp             CEEEETTS----SS---C-----EEEECCTT----------CCEEEEEEECCTTHHHHCCEEEEEEESS-----------
T ss_pred             CCCccCCC----CC---c-----cceEeCCC----------cCEEEeEEEECccccccCCEEeCCccCc-----------
Confidence            57999986    12   1     23468752          357999865432    136899999874           


Q ss_pred             ceecccccceEEEEeEecCCCCCCCCCCC
Q psy3643         119 CLMRTGTYNVFMEYCTCMSKDGCNTASLP  147 (153)
Q Consensus       119 C~~~~g~~~~~~~~C~C~~~D~CN~A~~~  147 (153)
                      |.....  ++   .=.||++|+||.++..
T Consensus        48 CP~~~~--~~---~i~CC~TD~CN~~~~~   71 (74)
T 1hc9_A           48 CPSKKP--YE---EVTCCSTDKCNPHPKQ   71 (74)
T ss_dssp             CCCCCT--TC---EEEEECSTTCSCCTTS
T ss_pred             CcCCCC--Cc---eeEecCCCCCCCcCCC
Confidence            221111  11   1256699999999843

>2h7z_A Irditoxin subunit A; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1

Probab=96.56  E-value=0.0054  Score=40.88  Aligned_cols=64  Identities=20%  Similarity=0.447  Sum_probs=39.3

Q ss_pred             eEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEEC-CeEE-EEEccccCCCCCCcCcccccee
Q psy3643          44 KCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVH-GEWR-YYRGCAWLGEPGIGGDERYCLM  121 (153)
Q Consensus        44 ~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v~-g~~~-viR~C~~~~~~~~~~~~~~C~~  121 (153)
                      +||+|+......|.        ..+.| .+           ..|.|...... ...+ |.|+|+..=           ..
T Consensus         9 ~C~~C~~~~s~~~~--------~~~tC-ge-----------~~Cyk~~~~~~~~g~~~i~rGCaatC-----------P~   57 (75)
T 2h7z_A            9 LCFECNRMTSSDCS--------TALRC-YR-----------GSCYTLYRPDENCELKWAVKGCAETC-----------PT   57 (75)
T ss_dssp             EEECEETTTCCCTT--------CEEEE-CS-----------SEEEEEEEECTTSCEEEEEEEEESSC-----------CC
T ss_pred             cccCCCCcccCCCC--------ccCCc-CC-----------CEeEeEEEeCCCCCceeEeCCccCcC-----------cC
Confidence            89999987644442        23457 32           57998866542 2455 999998752           21


Q ss_pred             cccccceEEEEeEecCCCCCCC
Q psy3643         122 RTGTYNVFMEYCTCMSKDGCNT  143 (153)
Q Consensus       122 ~~g~~~~~~~~C~C~~~D~CN~  143 (153)
                      ...  ++.+   .||.+|.||.
T Consensus        58 ~~~--~~~v---~CCsTD~CN~   74 (75)
T 2h7z_A           58 AGP--NERV---KCCRSPRCND   74 (75)
T ss_dssp             CCT--TCEE---EEECSTTCCC
T ss_pred             CCC--Ccee---EecCCCCCCC
Confidence            111  1111   5669999995

>1ff4_A Muscarinic toxin/acetylcholine receptor binding P; three fingers motif; 1.50A {Dendroaspis angusticeps} SCOP: g.7.1.1

Probab=96.51  E-value=0.005  Score=39.69  Aligned_cols=44  Identities=20%  Similarity=0.401  Sum_probs=28.1

Q ss_pred             eeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEE-EEEECCeEEEEEccccC
Q psy3643          43 IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKI-RQKVHGEWRYYRGCAWL  107 (153)
Q Consensus        43 I~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Ki-vq~v~g~~~viR~C~~~  107 (153)
                      |+||.|.|.   .|.        ..+.|+..          ...|.|. ........+|.|+|+..
T Consensus         1 l~C~~~~s~---~~~--------~~~tC~~g----------~~~Cyk~~~~~~~~g~~i~rGCa~t   45 (65)
T 1ff4_A            1 LTCVTTKSI---GGV--------TTEDCPAG----------QNVCFKRWHYVTPKNYDIIKGCAAT   45 (65)
T ss_dssp             CEEEEECTT---SSE--------EEEECCTT----------CCEEEEEEEESSSSCEEEEEEEESS
T ss_pred             CCCccCCCC---CCc--------cCeEcCCC----------cCEEeeeEEEecCCCCEEECCccCc
Confidence            579999863   221        23468752          3579988 43222248899999875

>1ywh_A Urokinase plasminogen activator surface receptor; UPAR, three-finger fold, protein-peptide complex, hydrolase; HET: ALC NAG FUC NDG BMA MAN; 2.70A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3

Probab=96.48  E-value=0.01  Score=49.50  Aligned_cols=101  Identities=23%  Similarity=0.458  Sum_probs=56.4

Q ss_pred             ecCCCCccCCCCCCccceeeeeeCccceeeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEE
Q psy3643          15 CMSKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKV   94 (153)
Q Consensus        15 ~~~~~~cn~a~~~~~~~l~~l~i~~~~aI~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v   94 (153)
                      | -.|+||--. |    ..+.++..+.+|.||+|.+..+. |...+    ...+.|+..          ...|+.++...
T Consensus        71 ~-~~~~~~~~~-~----~~~~~~a~g~sLsCysC~~~~~s-C~~g~----~~s~tCp~~----------~d~Cvt~~~~~  129 (313)
T 1ywh_A           71 C-GLDLCNQGN-S----GRAVTYSRSRYLECISCGSSDMS-CERGR----HQSLQCRSP----------EEQCLDVVTHW  129 (313)
T ss_dssp             E-CSTTTTSSC-C----CC------CCCSEEECBCSSSSC-HHHHT----TCEEECSST----------TCEEEEEEEEE
T ss_pred             h-ccccccCCC-C----ccceeeccccccCCccCCCCCCC-cccCC----CcccCCCCC----------CCEEEEEEEee
Confidence            5 789999855 2    23333456899999999987443 42110    135678862          34798887632


Q ss_pred             -----CC-eE--EEEEccccCCCCCCcCccccce--ecccccceEEEEeEecCCCCCCCCCC
Q psy3643          95 -----HG-EW--RYYRGCAWLGEPGIGGDERYCL--MRTGTYNVFMEYCTCMSKDGCNTASL  146 (153)
Q Consensus        95 -----~g-~~--~viR~C~~~~~~~~~~~~~~C~--~~~g~~~~~~~~C~C~~~D~CN~A~~  146 (153)
                           +| ..  .+.|+|+....         |.  ...+...++... +||++|+||.++.
T Consensus       130 s~~~~~g~~~~~~~~KgC~~s~~---------C~gsv~~~~~~~~~~~-~CC~TD~CN~~p~  181 (313)
T 1ywh_A          130 IQEGEEGRPKDDRHLRGCGYLPG---------CPGSNGFHNNDTFHFL-KCCNTTKCNEGPI  181 (313)
T ss_dssp             CC-----CCSCCEEEEEEEECTT---------CSEEEEEECSSEEEEE-EEECSTTTTCSSC
T ss_pred             eeeccCCccccceEecCCCCcCC---------CCCeEEeCCceEEEee-eeeCCCCcCCCCC
Confidence                 34 22  66899976543         41  111111122222 8889999996664

>2jqp_A WEAK toxin 1; protein; NMR {Bungarus candidus}

Probab=96.45  E-value=0.009  Score=38.48  Aligned_cols=44  Identities=32%  Similarity=0.741  Sum_probs=28.4

Q ss_pred             eeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEE-EEEECCeEEEEEccccC
Q psy3643          43 IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKI-RQKVHGEWRYYRGCAWL  107 (153)
Q Consensus        43 I~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Ki-vq~v~g~~~viR~C~~~  107 (153)
                      |+||.|.|.   .|.        ..+.|+..          ...|.|. ........+|.|+|+..
T Consensus         1 l~C~~~~s~---~~~--------~~~tC~~g----------~~~Cyk~~~~~~~~g~~i~rGCa~t   45 (65)
T 2jqp_A            1 LTCLICPEK---DCQ--------KVHTCRNE----------EKICVKRFYDKNQLGWRAQRGCAVS   45 (65)
T ss_dssp             CEEEECSSS---SCC--------EEEECCSS----------CCEEEEEEEEETTTEEEEEEEEESC
T ss_pred             CCCccCCCC---CCc--------cceEcCCC----------cCEEEeeEEEccCCCCEEECCccCc
Confidence            579999863   221        23468752          3579988 44332258899999875

>2l5s_A TGF-beta receptor type-1; ALK5, transforming growth factor beta, type I receptor, SIGN protein; NMR {Homo sapiens}

Probab=96.41  E-value=0.01  Score=40.58  Aligned_cols=81  Identities=16%  Similarity=0.297  Sum_probs=49.1

Q ss_pred             ccceeeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEECCeEEEEEccccCCCCCCcCcccc
Q psy3643          39 AVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERY  118 (153)
Q Consensus        39 ~~~aI~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v~g~~~viR~C~~~~~~~~~~~~~~  118 (153)
                      ++.+|+|| |+     .|.+. |.      .|..           ...|.+.+...+|...+.|+|....+.-.....-.
T Consensus         2 ~~~~l~C~-C~-----~C~~~-n~------tC~t-----------~g~Cf~sv~~~~g~~~~~~gC~~~~e~~p~~~~~~   57 (88)
T 2l5s_A            2 SATALQCF-CH-----LCTKD-NF------TCVT-----------DGLCFVSVTETTDKVIHNSMCIAEIDLIPRDRPFV   57 (88)
T ss_dssp             CTTSEEEE-CS-----SCTTT-TT------EEEE-----------SSEEEEEEEECSSCEEEEEEEECGGGCSSSSSCGG
T ss_pred             CceeEEEE-CC-----CCCCC-CC------EEec-----------CCEEeEEEEECCCCEEEEECCCChhhcCCCCCceE
Confidence            46789999 85     47543 21      3432           13699999888887788899987643100122235


Q ss_pred             ceecccccceEEEEeEecCCCCCCCCC
Q psy3643         119 CLMRTGTYNVFMEYCTCMSKDGCNTAS  145 (153)
Q Consensus       119 C~~~~g~~~~~~~~C~C~~~D~CN~A~  145 (153)
                      |......+..+..  .||++|.||...
T Consensus        58 C~~~~~~~~~~~i--~CC~~D~CN~~~   82 (88)
T 2l5s_A           58 CAPSSKTGSVTTT--YCCNQDHCNKIE   82 (88)
T ss_dssp             GCSCCCSSTTEEE--EEECSTTCGGGS
T ss_pred             ecCCCCCCCceEe--EeCCccccCCCC
Confidence            8755443222223  344899999754

>2pjy_C TGF-beta receptor type-1; ternary complex, three finger toxin, cytokine-cytokine recep complex; 3.00A {Homo sapiens} PDB: 3kfd_I

Probab=96.26  E-value=0.0089  Score=40.13  Aligned_cols=58  Identities=16%  Similarity=0.131  Sum_probs=36.2

Q ss_pred             CceEEEEEEECCeEEEEEccccCCCCCCcCccccceecccccceEEEEeEecCCCCCCCC
Q psy3643          85 TMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTA  144 (153)
Q Consensus        85 t~C~Kivq~v~g~~~viR~C~~~~~~~~~~~~~~C~~~~g~~~~~~~~C~C~~~D~CN~A  144 (153)
                      ..|.+.+...+|...+.|+|.-..+.-..+..-.|......+..+..  .||++|.||..
T Consensus        20 g~Cf~sv~~~~g~~~~~~gC~~~~e~~p~~~~~~C~~~~~~~~~~~i--~CC~~D~CN~~   77 (79)
T 2pjy_C           20 GLCFVSVTETTDKVIHNSSCIAEIDLIPRDRPFVCAPSSKTGSVTTT--YCCNQDHCNKI   77 (79)
T ss_dssp             SEEEEEEECSSSCCEEEEEEECTTTSSSSSSCGGGCCHHHHTSSEEE--EEECSTTCCCC
T ss_pred             CEEeEEEEECCCCEEEEECCCChhHcCCCCCCcEeCCCCCCCCceee--EECCccccCCC
Confidence            47999998877888889999876531111223458754432222223  34489999964

>1ntn_A Neurotoxin I; postsynaptic neurotoxin; 1.90A {Naja oxiana} SCOP: g.7.1.1 PDB: 1w6b_A

Probab=96.21  E-value=0.011  Score=38.78  Aligned_cols=47  Identities=21%  Similarity=0.230  Sum_probs=29.1

Q ss_pred             CceEEEEEEECC----eEEEEEccccCCCCCCcCccccceecccccceEEEEeEecCCCCCCCCCCC
Q psy3643          85 TMCRKIRQKVHG----EWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASLP  147 (153)
Q Consensus        85 t~C~Kivq~v~g----~~~viR~C~~~~~~~~~~~~~~C~~~~g~~~~~~~~C~C~~~D~CN~A~~~  147 (153)
                      ..|.|......-    ..+|.|+|+..           |.....  ++   .=.||++|.||.+...
T Consensus        19 ~~Cyk~~~~~~~~~~~g~~i~rGCaat-----------CP~~~~--~~---~v~CC~TD~CN~~~~~   69 (72)
T 1ntn_A           19 NLCYTKTWCDAWCGSRGKVIELGCAAT-----------CPTVES--YQ---DIKCCSTDNCNPHPKQ   69 (72)
T ss_dssp             CEEEEEEECCTTHHHHCCEEEEEEESS-----------CCCCCT--TE---EEEEECSTTCCCCTTC
T ss_pred             CeEEeEEEecccccccCCeEeCCccCc-----------CcCCCC--Cc---eeEecCCCCCCCCCCc
Confidence            579998653321    36899999874           221111  11   2256699999999843

>2h62_C Bone morphogenetic protein receptor type IA; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.7.1.3 PDB: 2h64_B 3nh7_A 1rew_C 3qb4_B 2goo_B* 2qj9_D 2qja_C 2qjb_C 2k3g_A 1es7_B

Probab=96.11  E-value=0.01  Score=43.35  Aligned_cols=60  Identities=23%  Similarity=0.330  Sum_probs=38.6

Q ss_pred             CceEEEEEEEC-CeEEEEEccccCCCCCCcCccccceecccccceEEEEeEecCCCCCCCCCCCCCCC
Q psy3643          85 TMCRKIRQKVH-GEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASLPNMSP  151 (153)
Q Consensus        85 t~C~Kivq~v~-g~~~viR~C~~~~~~~~~~~~~~C~~~~g~~~~~~~~C~C~~~D~CN~A~~~~~~~  151 (153)
                      ..|.+.++..+ |...+.|+|.. .+    ...-.|......+..+..  .||.+|.||....+.+.|
T Consensus        57 g~Cf~sv~~~~~G~~~~~~GCl~-~e----~~~~~C~~~~~~~~~~~i--~CC~~D~CN~~l~p~lpp  117 (129)
T 2h62_C           57 GHCFAIIEEDDQGETTLASGCMK-YE----GSDFQCKDSPKAQLRRTI--ECCRTNLCNQYLQPTLPP  117 (129)
T ss_dssp             SEEEEEEEECSSSCEEEEEEEEC-ST----THHHHHHCCTTCSSCEEE--EEECSTTGGGGCCCCCCC
T ss_pred             CeEeEEEEEcCCCCEEEEeCCcC-cc----CCcccccCCCCCCCccee--EecCccccCCCCCCCCCC
Confidence            36999998765 78888999987 33    223467655443322233  445799999866554444

>2fd6_U Urokinase plasminogen activator surface receptor; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3 PDB: 3bt2_U* 3bt1_U* 2i9b_E* 3u74_U* 3u73_U*

Probab=96.03  E-value=0.019  Score=47.02  Aligned_cols=104  Identities=21%  Similarity=0.480  Sum_probs=63.5

Q ss_pred             EEEEeecCCCCccCCCCCCccceeeeeeCccceeeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEE
Q psy3643          10 MEYCTCMSKDGCNTASLPNMSPIFTVVISAVSCIKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRK   89 (153)
Q Consensus        10 ~~~~~~~~~~~cn~a~~~~~~~l~~l~i~~~~aI~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~K   89 (153)
                      ...| | +.|.||.+  |++    .+--..-..++||.|-+.....|..+-    ..+++|..          +...|+.
T Consensus       168 ~~~C-C-~tD~CN~~--p~l----p~~~~~pNG~~CpaC~~~~s~~Cs~~~----t~~v~CtG----------~En~Cv~  225 (276)
T 2fd6_U          168 FLKC-C-NTTKCNEG--PIL----ELENLPQNGRQCYSCKGNSTHGCSSEE----TFLIDCRG----------PMNQCLV  225 (276)
T ss_dssp             EEEE-E-CSTTTTCS--SCC----CGGGSCEEEEEEEEEEEBTTTBSSTTT----CEEEEEET----------TCCEEEE
T ss_pred             eeEc-c-CCCccCCC--CCC----CCCCCCCCCCCCcccccCCCCCCCCCC----cccceeec----------Cccccee
Confidence            4444 5 88999954  322    222334589999999998777786421    12367875          2367999


Q ss_pred             EEEEECC--eEEEEEccccCCCCCCcCccccceecc--cccceEEEEeEecCCCCCCCC
Q psy3643          90 IRQKVHG--EWRYYRGCAWLGEPGIGGDERYCLMRT--GTYNVFMEYCTCMSKDGCNTA  144 (153)
Q Consensus        90 ivq~v~g--~~~viR~C~~~~~~~~~~~~~~C~~~~--g~~~~~~~~C~C~~~D~CN~A  144 (153)
                      ++..+..  ...++|+|+-..         .|....  ..+.+....=+|++..+||+|
T Consensus       226 ~~g~~g~~~~s~~vkGCaT~s---------~C~~~~~~~~~~~~~~~~sCc~G~~CN~~  275 (276)
T 2fd6_U          226 ATGTHEPKNQSYMVRGCATAS---------MCQHAHLGDAFSMNHIDVSCCTKSGCNHP  275 (276)
T ss_dssp             EEEEETTTTEEEEEEEEECGG---------GCC---CGGGGTCSSCEEEEECSTTTTSC
T ss_pred             eeeeeccCCceEEEecCCCch---------hhcCCCcccccccccceeEeCCCCCCCCC
Confidence            9998732  456799999543         254321  112211111266699999987

>1kba_A Kappa-bungarotoxin; 2.30A {Bungarus multicinctus} SCOP: g.7.1.1 PDB: 2nbt_A

Probab=95.93  E-value=0.014  Score=37.68  Aligned_cols=43  Identities=23%  Similarity=0.370  Sum_probs=26.3

Q ss_pred             CceEEEEEEEC----CeEEEEEccccCCCCCCcCcccccee-cccccceEEEEeEecCCCCCCC
Q psy3643          85 TMCRKIRQKVH----GEWRYYRGCAWLGEPGIGGDERYCLM-RTGTYNVFMEYCTCMSKDGCNT  143 (153)
Q Consensus        85 t~C~Kivq~v~----g~~~viR~C~~~~~~~~~~~~~~C~~-~~g~~~~~~~~C~C~~~D~CN~  143 (153)
                      ..|.|......    ...+|.|+|+..           |.. ...  +   +.=.||++|.||.
T Consensus        19 ~~Cyk~~~~~~~~~~~g~~i~rGCa~t-----------CP~~~~~--~---~~i~CC~TD~CN~   66 (66)
T 1kba_A           19 DICFLKAQCDKFCSIRGPVIEQGCVAT-----------CPQFRSN--Y---RSLLCCTTDNCNH   66 (66)
T ss_dssp             CEEEEEEECCTTHHHHCCEEEEEEESS-----------CCCCCTT--E---EEEEEESSTTCCC
T ss_pred             CeEEEEEEeCccccccCCEEeCCccCc-----------CcCCCCC--C---ceeEecCCCCCCC
Confidence            57999865432    137899999854           322 111  1   2225679999994

>1vyc_A Bucain, neurotoxin; snake neurotoxin; NMR {Bungarus candidus} SCOP: g.7.1.1 PDB: 2h8u_A

Probab=95.80  E-value=0.0082  Score=38.69  Aligned_cols=44  Identities=20%  Similarity=0.234  Sum_probs=27.3

Q ss_pred             eeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEE-EEEECCeEEEEEccccC
Q psy3643          43 IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKI-RQKVHGEWRYYRGCAWL  107 (153)
Q Consensus        43 I~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Ki-vq~v~g~~~viR~C~~~  107 (153)
                      |+||.|.|.   .|.        ..+.|+..          ...|.|. ........+|.|+|+..
T Consensus         1 l~C~~~~s~---~~~--------~~~tC~~g----------~~~Cyk~~~~~~~~g~~i~rGCa~t   45 (65)
T 1vyc_A            1 RKCLIKYSQ---ANE--------SSKTCPSG----------QLLCLKKWEIGNPSGKEVKRGCVAT   45 (65)
T ss_dssp             CEEEECCTT---SCC--------EEEECCTT----------CCEEEEEECCSSSSCCCEEEEEESS
T ss_pred             CCCccCCCC---CCc--------cceEcCCC----------cCEEEeeEEEecCCCCEEECCccCc
Confidence            579998863   221        23468752          3579887 33222247899999875

>1jgk_A Candoxin; beta sheet, snake venom protein, toxin; NMR {Bungarus candidus} SCOP: g.7.1.1

Probab=95.65  E-value=0.02  Score=36.95  Aligned_cols=46  Identities=28%  Similarity=0.463  Sum_probs=27.8

Q ss_pred             eeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEECCeEEEEEccccC
Q psy3643          43 IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYRGCAWL  107 (153)
Q Consensus        43 I~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v~g~~~viR~C~~~  107 (153)
                      ++||.|.|..   |.   .   ...+.|+..          ...|.|.........+|.|+|+..
T Consensus         1 l~C~~~~s~~---~~---~---~~~~tC~~g----------~~~Cyk~~~~~~~g~~i~rGCaat   46 (66)
T 1jgk_A            1 MKCKICNFDT---CR---A---GELKVCASG----------EKYCFKESWREARGTRIERGCAAT   46 (66)
T ss_dssp             CEEEECCTTS---CS---C---CEEEECCSS----------SCEEEEEEECCSSCCEEECCEESC
T ss_pred             CCCccCCCCC---Cc---C---CCeeECCCC----------cCEEeeeEEeCCCCCEEECCccCc
Confidence            5799888642   21   0   123467752          357988754322247899999874

>1mr6_A Neurotoxin; venom; NMR {Bungarus multicinctus} SCOP: g.7.1.1

Probab=95.61  E-value=0.0064  Score=39.29  Aligned_cols=63  Identities=27%  Similarity=0.578  Sum_probs=36.7

Q ss_pred             eeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEE-CC---eEEEEEccccCCCCCCcCcccc
Q psy3643          43 IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKV-HG---EWRYYRGCAWLGEPGIGGDERY  118 (153)
Q Consensus        43 I~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v-~g---~~~viR~C~~~~~~~~~~~~~~  118 (153)
                      |+||.|.|.   .|.        ..+.|+..          ..+|.|..... .|   ..+|.|+|+..           
T Consensus         1 l~C~~~~~~---~~~--------~~~tCp~g----------~~~C~~~~~~~~~g~~~~~~i~rGCa~t-----------   48 (68)
T 1mr6_A            1 MQCKTCSFY---TCP--------NSETCPDG----------KNICVKRSWTAVRGDGPKREIRRECAAT-----------   48 (68)
T ss_dssp             CBCCCCSSS---CCC--------SCCBCCTT----------CCCEEEECCBCCSSSCCSBCCEEEECSS-----------
T ss_pred             CCCcCCCCC---CCc--------cccEeCCC----------CCEEEEEEEecccCccccceEeCCccCc-----------
Confidence            578888863   221        23468752          25798875433 22   26789999654           


Q ss_pred             ceec-ccccceEEEEeEecCCCCCCC
Q psy3643         119 CLMR-TGTYNVFMEYCTCMSKDGCNT  143 (153)
Q Consensus       119 C~~~-~g~~~~~~~~C~C~~~D~CN~  143 (153)
                      |... ++ ..+     .||++|+||.
T Consensus        49 Cp~~~~~-~~v-----~CC~TD~CN~   68 (68)
T 1mr6_A           49 CPPSKLG-LTV-----FCCTTDNCNH   68 (68)
T ss_dssp             SSSCCSS-SCC-----CCBSSSSCCC
T ss_pred             CcCCCCC-cee-----EecCCCCCCC
Confidence            2211 11 111     5779999994

>1cvo_A Cardiotoxin V; cytotoxin; NMR {Naja atra} SCOP: g.7.1.1 PDB: 1kxi_A

Probab=94.95  E-value=0.021  Score=36.31  Aligned_cols=42  Identities=31%  Similarity=0.480  Sum_probs=25.3

Q ss_pred             CceEEEEEEEC-CeEEEEEccccCCCCCCcCccccceecccccceEEEEeEecCCCCCC
Q psy3643          85 TMCRKIRQKVH-GEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCN  142 (153)
Q Consensus        85 t~C~Kivq~v~-g~~~viR~C~~~~~~~~~~~~~~C~~~~g~~~~~~~~C~C~~~D~CN  142 (153)
                      ..|.|...... ...+|.|+|+..           |.....  +   +.=.||++|.||
T Consensus        20 ~~Cyk~~~~~~~~g~~i~rGCa~t-----------Cp~~~~--~---~~i~CC~TD~CN   62 (62)
T 1cvo_A           20 NLCFKATLKKFPLKFPVKRGCADN-----------CPKNSA--L---LKYVCCSTDKCN   62 (62)
T ss_dssp             CEEEEEEETTSSSCCCEEEEEESS-----------CCCCCT--T---EEEEEESSTTCC
T ss_pred             CEEeeeEEeCCCCCcEEeCCccCc-----------CcCCCC--C---cEeEecCCCCCC
Confidence            57998854322 346899999875           221111  1   122566999999

>1lsi_A LSIII; venom, multigene family, neurotoxin; NMR {Laticauda semifasciata} SCOP: g.7.1.1

Probab=94.62  E-value=0.019  Score=36.98  Aligned_cols=43  Identities=26%  Similarity=0.285  Sum_probs=25.9

Q ss_pred             CceEEEEEEEC----CeEEEEEccccCCCCCCcCccccceecccccceEEEEeEecCCCCCCC
Q psy3643          85 TMCRKIRQKVH----GEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNT  143 (153)
Q Consensus        85 t~C~Kivq~v~----g~~~viR~C~~~~~~~~~~~~~~C~~~~g~~~~~~~~C~C~~~D~CN~  143 (153)
                      ..|.|......    ...+|.|+|+..           |.....  ++.   =.||++|+||.
T Consensus        18 ~~Cyk~~~~~~~~~~rg~~i~rGCa~t-----------CP~~~~--~~~---i~CC~TD~CN~   64 (66)
T 1lsi_A           18 EICYVKSWCNAWCSSRGKVLEFGCAAT-----------CPSVNT--GTE---IKCCSADKCNT   64 (66)
T ss_dssp             CEEEEEECCCTTCTTSCCCCEEEEESS-----------CCCCCS--SCE---EEEESSTTTTS
T ss_pred             CEEEEEEEECccccccCcEEeCCccCc-----------CcCCCC--Cce---eEecCCccCCC
Confidence            57998854332    147789999864           221111  111   15669999996

>3evs_C Bone morphogenetic protein receptor type-1B; ligand-receptor complex, cystin-knot ligand, three-finger to (receptor); 2.10A {Mus musculus}

Probab=93.68  E-value=0.16  Score=36.43  Aligned_cols=86  Identities=19%  Similarity=0.391  Sum_probs=48.9

Q ss_pred             eCccceeeEEecCCCCCCCCCCC-CCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEE-ECCeEEEEEccccCCCCCCcC
Q psy3643          37 ISAVSCIKCWNCRSDSDPKCADP-FDNSSIPINDCKVEPELSHLPGIRATMCRKIRQK-VHGEWRYYRGCAWLGEPGIGG  114 (153)
Q Consensus        37 i~~~~aI~CY~CnS~~dp~C~d~-f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~-v~g~~~viR~C~~~~~~~~~~  114 (153)
                      +....+|+|| |+.    .|.+. +|.      .|..           ...|.+.+.. .+|...+.|+|....+     
T Consensus        17 ~~~~~~L~C~-C~~----~C~~~~~n~------tC~t-----------~g~Cf~sv~~~~~G~~~~~~GCl~~~~-----   69 (119)
T 3evs_C           17 TPRPKILRCK-CHH----HCPEDSVNN------ICST-----------DGYCFTMIEEDDSGMPVVTSGCLGLEG-----   69 (119)
T ss_dssp             -----CEEEE-CSS----SCCTTSCTT------EEEE-----------SSEEEEEEEECTTCSEEEEEEEECSTT-----
T ss_pred             cccCCCEEee-eCC----CcCCCCcCC------eecc-----------CCEEEEEEEEcCCCcEEEEEcCCcccC-----
Confidence            3456679999 963    58643 222      2532           1369998886 4577788899987532     


Q ss_pred             ccccceecccccceEEEEeEec-CCCCCCCCCCCCCCC
Q psy3643         115 DERYCLMRTGTYNVFMEYCTCM-SKDGCNTASLPNMSP  151 (153)
Q Consensus       115 ~~~~C~~~~g~~~~~~~~C~C~-~~D~CN~A~~~~~~~  151 (153)
                      ..-.|......+..+..  .|| ++|.||....+.+.|
T Consensus        70 ~~~~C~~~~~~~~~~~i--~CC~~~DfCN~~l~p~Lpp  105 (119)
T 3evs_C           70 SDFQCRDTPIPHQRRSI--ECCTERNECNKDLHPTLPP  105 (119)
T ss_dssp             HHHHSSCCCCTTCCEEE--EEECSSTTGGGGCCCCCCC
T ss_pred             CccccccCCcccCccee--eccCCcCccCCCCccccCC
Confidence            23357644332111222  577 789999865555443

>3era_A Erabutoxin A; snake neurotoxin, venom, postsynaptic neurotoxin; 1.70A {Laticauda semifasciata} SCOP: g.7.1.1 PDB: 2era_A

Probab=93.45  E-value=0.37  Score=30.59  Aligned_cols=21  Identities=19%  Similarity=0.265  Sum_probs=15.6

Q ss_pred             CceEEEEEEECCeEEEEEccc
Q psy3643          85 TMCRKIRQKVHGEWRYYRGCA  105 (153)
Q Consensus        85 t~C~Kivq~v~g~~~viR~C~  105 (153)
                      ..|.|.........+|.|+|+
T Consensus        22 ~~Cyk~~~~~~~g~~i~rGC~   42 (62)
T 3era_A           22 SSCYNKQWSDFRGTIIERGCG   42 (62)
T ss_dssp             CCEEEEEEEETTEEEEEEEES
T ss_pred             CeeeeeEEeCCCCCEEeeeCC
Confidence            569988665544568999995

>4aea_A Long neurotoxin 1; three-finger toxin, nicotinic acetylcholine receptor; 1.94A {Naja kaouthia} SCOP: g.7.1.1 PDB: 1lxg_A 1lxh_A 1yi5_F 1ctx_A 2ctx_A 1txa_A 1txb_A

Probab=92.86  E-value=0.24  Score=32.31  Aligned_cols=47  Identities=26%  Similarity=0.309  Sum_probs=28.6

Q ss_pred             CceEEEEEEEC----CeEEEEEccccCCCCCCcCccccceecccccceEEEEeEecCCCCCCCCCCC
Q psy3643          85 TMCRKIRQKVH----GEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCNTASLP  147 (153)
Q Consensus        85 t~C~Kivq~v~----g~~~viR~C~~~~~~~~~~~~~~C~~~~g~~~~~~~~C~C~~~D~CN~A~~~  147 (153)
                      ..|.|..-...    ...+|.|+|+..           |.....  ++   .=.||++|.||..+..
T Consensus        18 ~~Cyk~~~~~~~~~~~g~~i~rGCaat-----------CP~~~~--~~---~v~CCsTD~CN~~~~~   68 (71)
T 4aea_A           18 HVCYTKTWCDAFCSIRGKRVDLGCAAT-----------CPTVKT--GV---DIQCCSTDNCNPFPTR   68 (71)
T ss_dssp             CEEEEEEECCTTHHHHCCEEEEEEESS-----------CCCCCT--TE---EEEEECSTTCCCCCCC
T ss_pred             CeEeEEEEecccccCCCcEEeCcccCc-----------CcCCCC--Cc---eeEecCCCCCCCCccc
Confidence            57988755432    235789999865           221111  12   1256699999987754

>3plc_A Beta-cardiotoxin OH-27; beta-sheet, novel cardiotoxin; 2.41A {Ophiophagus hannah} SCOP: g.7.1.1

Probab=92.67  E-value=0.076  Score=33.73  Aligned_cols=23  Identities=26%  Similarity=0.501  Sum_probs=13.0

Q ss_pred             CceEEEEEEEC-CeEEEEEccccC
Q psy3643          85 TMCRKIRQKVH-GEWRYYRGCAWL  107 (153)
Q Consensus        85 t~C~Kivq~v~-g~~~viR~C~~~  107 (153)
                      ..|.|...... |.++|.|+|+..
T Consensus        20 ~~Cyk~~~~~~~~~~~i~rGCa~t   43 (63)
T 3plc_A           20 DKCVKMTIKKLPSKYDVIRGCIDI   43 (63)
T ss_dssp             CEEEEEC--------CCEEEEESS
T ss_pred             CeEeEEEEecCCCCEEEeCCccCc
Confidence            57998866653 345789999765

>3vts_A Cytotoxin 1; three finger toxin, venom toxin; 2.43A {Hemachatus haemachatus}

Probab=92.52  E-value=0.11  Score=33.22  Aligned_cols=42  Identities=29%  Similarity=0.482  Sum_probs=26.5

Q ss_pred             CceEEEEEEECCeEEEEEccccCCCCCCcCccccceecccccceEEEEeEecCCCCCC
Q psy3643          85 TMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCN  142 (153)
Q Consensus        85 t~C~Kivq~v~g~~~viR~C~~~~~~~~~~~~~~C~~~~g~~~~~~~~C~C~~~D~CN  142 (153)
                      ..|.|..-......+|.|+|+..           |-....  ++++   .||++|.||
T Consensus        20 nlCykk~~~~~~g~~i~rGCaat-----------CP~~~~--~~~v---~CC~tDkCN   61 (61)
T 3vts_A           20 NLCYKMTLMKMPKIPIKRGCTDA-----------CPKSSL--LVKV---VCCNKDKCN   61 (61)
T ss_dssp             CEEEEEEETTEEEEEEEEEEESS-----------CCCCCS--SEEE---EEECSTTCC
T ss_pred             ceEEeEEEecCCCCeEEeceeCc-----------CcCCCC--CcEE---EEeCCccCC
Confidence            57998765433367899999875           322221  2222   366999998

>3hh7_A Muscarinic toxin-like protein 3 homolog; haditoxin, three finger toxin, snake venom, neurotoxin, nicotinic acetylcholine receptors; 1.55A {Ophiophagus hannah} SCOP: g.7.1.0

Probab=91.85  E-value=0.54  Score=29.97  Aligned_cols=43  Identities=33%  Similarity=0.529  Sum_probs=27.8

Q ss_pred             CceEEEEEEECCeEEEEEccccCCCCCCcCccccceecccccceEEEEeEecCCCCCC
Q psy3643          85 TMCRKIRQKVHGEWRYYRGCAWLGEPGIGGDERYCLMRTGTYNVFMEYCTCMSKDGCN  142 (153)
Q Consensus        85 t~C~Kivq~v~g~~~viR~C~~~~~~~~~~~~~~C~~~~g~~~~~~~~C~C~~~D~CN  142 (153)
                      ..|.|........++|.|+|+..           |..... .++   .=.||++|.||
T Consensus        22 ~~Cyk~~~~~~~g~~i~rGCaat-----------Cp~~~~-~~~---~v~CCsTD~CN   64 (65)
T 3hh7_A           22 YFCYKSSWIDGREGRIERGCTFT-----------CPELTP-NGK---YVYCCRRDKCN   64 (65)
T ss_dssp             CEEEEEEEEETTEEEEEEEEESS-----------CCCCCT-TEE---EEEEECSTTTT
T ss_pred             CeEeEEEEecCCCCEEeCcccCc-----------CcCCCC-CCC---EeEECCCCCCC
Confidence            57999877765557889999764           322111 111   22566999999

>1f94_A Bucandin; three-finger snake presynaptic neurotoxin; 0.97A {Bungarus candidus} SCOP: g.7.1.1 PDB: 1ijc_A

Probab=91.39  E-value=0.043  Score=35.14  Aligned_cols=61  Identities=33%  Similarity=0.673  Sum_probs=35.9

Q ss_pred             eeEEecCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCceEEEEEEECCeEEEEE--ccccCCCCCCcCccccce
Q psy3643          43 IKCWNCRSDSDPKCADPFDNSSIPINDCKVEPELSHLPGIRATMCRKIRQKVHGEWRYYR--GCAWLGEPGIGGDERYCL  120 (153)
Q Consensus        43 I~CY~CnS~~dp~C~d~f~~~~~~~~dC~~~~~~~~~~g~~~t~C~Kivq~v~g~~~viR--~C~~~~~~~~~~~~~~C~  120 (153)
                      ++||.|.|.   .|.        ..+.|+..          ...|.|....    .+|.|  +|+..           |.
T Consensus         1 l~C~~~~~~---~~~--------~~~tC~~g----------~~~Cyk~~~~----~~i~r~~GCaat-----------Cp   44 (63)
T 1f94_A            1 MECYRCGVS---GCH--------LKITCSAE----------ETFCYKWLNK----ISNERWLGCAKT-----------CT   44 (63)
T ss_dssp             CEEEEEETT---EEE--------EEEECCTT----------CCEEEEEEET----TTCCEEEEEESC-----------CC
T ss_pred             CCCccCCCC---CCc--------cccCcCCC----------cCEEeeeEEE----eEEEEcCCccCc-----------Cc
Confidence            578888863   221        23467752          3579887543    67889  99854           32


Q ss_pred             ecccccceEEEEeEecCCCCCCC
Q psy3643         121 MRTGTYNVFMEYCTCMSKDGCNT  143 (153)
Q Consensus       121 ~~~g~~~~~~~~C~C~~~D~CN~  143 (153)
                      .... .+   +.=.||++|.||.
T Consensus        45 ~~~~-~~---~~v~CC~TD~CN~   63 (63)
T 1f94_A           45 EIDT-WN---VYNKCCTTNLCNT   63 (63)
T ss_dssp             CEES-SS---EEEEEECSTTCCC
T ss_pred             CCCC-CC---ceeEecCCCCCCC
Confidence            2111 01   1225669999994

>1ug4_A Cytotoxin 6, cardiotoxin VI; cobra, venom; 1.60A {Naja atra} PDB: 1h0j_A* 1i02_A 1xt3_A* 2bhi_A* 2crs_A 2crt_A 1cxn_A 1cxo_A 1tgx_A 1cb9_A 1ccq_A 1ffj_A 1chv_S 2ccx_A 1cre_A 1crf_A 1kbs_A 1kbt_A 1rl5_A 1zad_A ...

Probab=91.22  E-value=0.14  Score=32.29  Aligned_cols=23  Identities=22%  Similarity=0.343  Sum_probs=15.4

Q ss_pred             CceEEEEEEECCeEEEEEccccC
Q psy3643          85 TMCRKIRQKVHGEWRYYRGCAWL  107 (153)
Q Consensus        85 t~C~Kivq~v~g~~~viR~C~~~  107 (153)
                      ..|.|.........+|.|+|+..
T Consensus        19 ~~Cyk~~~~~~~g~~i~rGCa~t   41 (60)
T 1ug4_A           19 NLCYKMFMVAAPKVPVKRGCIDV   41 (60)
T ss_dssp             CEEEEEEETTEEEEEEEEEEESS
T ss_pred             CeEeeeEEecCCCCEEECCccCc
Confidence            57988843211147899999875

>1vb0_A Cobrotoxin B; short-chain neurotoxin, three-finger toxin; HET: SO4; 0.92A {Naja atra} SCOP: g.7.1.1 PDB: 1onj_A* 1je9_A 1nor_A 1iq9_A 1nea_A 3nds_A 1cod_A 1coe_A 1v6p_A 1g6m_A 1qkd_A 1qke_A 5ebx_A 1era_A 1fra_A 3ebx_A 6ebx_A 1nxb_A

Probab=87.45  E-value=1.4  Score=27.76  Aligned_cols=21  Identities=33%  Similarity=0.354  Sum_probs=15.4

Q ss_pred             CceEEEEEEECCeEEEEEccc
Q psy3643          85 TMCRKIRQKVHGEWRYYRGCA  105 (153)
Q Consensus        85 t~C~Kivq~v~g~~~viR~C~  105 (153)
                      ..|-|.........+|.|+|+
T Consensus        21 ~~Cyk~~~~~~~g~~i~rGCa   41 (61)
T 1vb0_A           21 TNCYKKWWSDHRGTIIERGCG   41 (61)
T ss_dssp             SCEEEEEEEETTEEEEEEEES
T ss_pred             CeeEeeEEcCCCCCEEeeeCc
Confidence            469988654433588999998

>1ntx_A Alpha-neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.7.1.1

Probab=84.87  E-value=1.8  Score=27.13  Aligned_cols=21  Identities=29%  Similarity=0.373  Sum_probs=14.9

Q ss_pred             CceEEEEEEECCeEEEEEccc
Q psy3643          85 TMCRKIRQKVHGEWRYYRGCA  105 (153)
Q Consensus        85 t~C~Kivq~v~g~~~viR~C~  105 (153)
                      ..|-|.........+|.|+|+
T Consensus        20 ~~Cyk~~~~~~~g~~i~rGCa   40 (60)
T 1ntx_A           20 NSCYKKYWRDHRGTIIERGCG   40 (60)
T ss_dssp             SCEEEEEEECSSSEEEEEEES
T ss_pred             cEeEeeEEcCCCCCEEeeECc
Confidence            469988554322488999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005